Query 021023
Match_columns 318
No_of_seqs 522 out of 1149
Neff 12.1
Searched_HMMs 46136
Date Fri Mar 29 07:00:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021023.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021023hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 2.8E-47 6E-52 278.9 26.0 288 8-295 24-312 (313)
2 PLN02385 hydrolase; alpha/beta 100.0 2.6E-44 5.7E-49 288.5 30.0 292 6-297 56-347 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 2E-42 4.3E-47 276.3 30.1 297 6-302 27-324 (330)
4 PHA02857 monoglyceride lipase; 100.0 2.2E-38 4.8E-43 247.3 29.2 269 15-295 4-273 (276)
5 COG2267 PldB Lysophospholipase 100.0 5.6E-37 1.2E-41 237.0 25.8 286 7-297 5-296 (298)
6 PLN02652 hydrolase; alpha/beta 100.0 2.7E-36 5.9E-41 242.1 30.4 280 8-297 107-389 (395)
7 PRK10749 lysophospholipase L2; 100.0 2.6E-36 5.7E-41 240.1 28.9 278 11-295 30-329 (330)
8 PLN02824 hydrolase, alpha/beta 100.0 7.6E-36 1.6E-40 235.0 22.8 260 14-294 10-293 (294)
9 TIGR02240 PHA_depoly_arom poly 100.0 1.4E-35 3.1E-40 231.1 23.4 260 16-297 6-268 (276)
10 PRK03592 haloalkane dehalogena 100.0 1.3E-34 2.8E-39 228.1 24.0 262 16-296 11-290 (295)
11 PLN03087 BODYGUARD 1 domain co 100.0 1.9E-34 4E-39 234.2 25.3 265 15-294 179-478 (481)
12 PRK00870 haloalkane dehalogena 100.0 6.8E-35 1.5E-39 230.2 21.6 252 22-295 34-301 (302)
13 KOG4178 Soluble epoxide hydrol 100.0 1E-33 2.2E-38 211.4 22.2 271 8-295 18-320 (322)
14 PLN02965 Probable pheophorbida 100.0 2E-34 4.3E-39 222.0 18.4 236 39-295 5-253 (255)
15 PLN02679 hydrolase, alpha/beta 100.0 7.5E-34 1.6E-38 228.2 22.1 260 19-295 68-357 (360)
16 TIGR01607 PST-A Plasmodium sub 100.0 5.2E-33 1.1E-37 220.2 25.3 269 16-293 2-331 (332)
17 PRK10673 acyl-CoA esterase; Pr 100.0 2E-33 4.3E-38 217.3 22.1 250 23-294 2-254 (255)
18 PRK03204 haloalkane dehalogena 100.0 1.4E-33 3.1E-38 220.0 21.1 261 6-292 9-285 (286)
19 TIGR03611 RutD pyrimidine util 100.0 3.6E-33 7.9E-38 216.3 19.7 252 24-293 1-256 (257)
20 TIGR03343 biphenyl_bphD 2-hydr 100.0 6E-33 1.3E-37 217.7 20.6 249 21-293 19-281 (282)
21 COG1647 Esterase/lipase [Gener 100.0 1.1E-32 2.4E-37 192.4 18.4 228 37-293 15-242 (243)
22 PRK06489 hypothetical protein; 100.0 2.8E-32 6E-37 219.7 23.3 261 19-296 47-358 (360)
23 TIGR03056 bchO_mg_che_rel puta 100.0 1.9E-32 4E-37 214.8 21.5 258 15-293 9-278 (278)
24 PLN02578 hydrolase 100.0 3.8E-32 8.3E-37 218.2 23.1 255 15-293 69-353 (354)
25 PLN03084 alpha/beta hydrolase 100.0 6.6E-32 1.4E-36 215.5 24.2 268 7-293 100-382 (383)
26 PRK10349 carboxylesterase BioH 100.0 1.2E-32 2.6E-37 212.6 18.8 245 24-293 4-254 (256)
27 PRK13604 luxD acyl transferase 100.0 2.7E-31 5.9E-36 201.1 24.0 237 9-274 7-247 (307)
28 PRK07581 hypothetical protein; 100.0 6.3E-31 1.4E-35 210.8 23.0 263 19-297 23-338 (339)
29 TIGR01250 pro_imino_pep_2 prol 100.0 5.7E-31 1.2E-35 207.5 22.3 261 16-293 6-288 (288)
30 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.4E-32 1.2E-36 209.0 15.7 240 24-292 2-250 (251)
31 PRK11126 2-succinyl-6-hydroxy- 100.0 7E-31 1.5E-35 201.4 18.8 228 37-294 2-241 (242)
32 TIGR01392 homoserO_Ac_trn homo 100.0 3E-31 6.5E-36 213.1 16.8 261 19-293 13-351 (351)
33 PRK08775 homoserine O-acetyltr 100.0 4.7E-31 1E-35 211.3 17.0 257 18-296 42-340 (343)
34 PF12697 Abhydrolase_6: Alpha/ 100.0 3.3E-31 7.2E-36 201.5 15.2 217 40-279 1-224 (228)
35 PRK00175 metX homoserine O-ace 100.0 1.7E-30 3.7E-35 210.0 19.4 265 20-297 31-376 (379)
36 PLN02211 methyl indole-3-aceta 100.0 1.3E-30 2.9E-35 201.3 17.6 248 19-293 4-268 (273)
37 TIGR01738 bioH putative pimelo 100.0 2E-30 4.2E-35 199.5 18.6 235 37-292 4-245 (245)
38 PLN02511 hydrolase 100.0 7.6E-30 1.7E-34 206.1 22.4 282 8-298 68-368 (388)
39 KOG4409 Predicted hydrolase/ac 100.0 6.2E-30 1.3E-34 191.7 19.5 272 12-294 66-363 (365)
40 KOG1454 Predicted hydrolase/ac 100.0 1.7E-30 3.6E-35 203.0 17.0 248 35-295 56-324 (326)
41 TIGR03695 menH_SHCHC 2-succiny 100.0 1.7E-29 3.8E-34 194.9 19.6 233 37-292 1-250 (251)
42 PRK05077 frsA fermentation/res 100.0 1.4E-28 3E-33 199.5 25.3 243 9-296 166-413 (414)
43 TIGR01249 pro_imino_pep_1 prol 100.0 3.5E-29 7.6E-34 197.6 21.2 262 13-294 6-304 (306)
44 PLN02894 hydrolase, alpha/beta 100.0 1.6E-28 3.5E-33 199.2 24.2 261 23-299 93-389 (402)
45 PRK14875 acetoin dehydrogenase 100.0 2.9E-29 6.4E-34 204.5 14.6 247 18-294 115-370 (371)
46 PRK10985 putative hydrolase; P 100.0 6.9E-28 1.5E-32 191.3 21.0 278 9-296 29-321 (324)
47 PLN02980 2-oxoglutarate decarb 100.0 2.1E-27 4.5E-32 220.3 23.6 247 35-300 1369-1644(1655)
48 TIGR03100 hydr1_PEP hydrolase, 100.0 1.7E-26 3.6E-31 178.8 23.6 253 15-293 5-273 (274)
49 KOG2382 Predicted alpha/beta h 100.0 6.5E-27 1.4E-31 175.2 19.2 261 22-295 36-313 (315)
50 KOG4391 Predicted alpha/beta h 100.0 3.2E-27 6.9E-32 164.3 14.6 238 4-298 47-285 (300)
51 PLN02872 triacylglycerol lipas 100.0 1.7E-26 3.6E-31 184.9 20.5 285 6-298 39-392 (395)
52 PRK05855 short chain dehydroge 100.0 2E-26 4.4E-31 198.8 21.4 263 14-296 5-293 (582)
53 PRK10566 esterase; Provisional 100.0 6.6E-26 1.4E-30 174.4 21.5 212 35-295 25-248 (249)
54 PRK06765 homoserine O-acetyltr 99.9 1.5E-25 3.4E-30 179.5 21.9 262 21-294 40-387 (389)
55 TIGR01836 PHA_synth_III_C poly 99.9 7.5E-25 1.6E-29 176.0 23.1 266 17-294 43-349 (350)
56 KOG2984 Predicted hydrolase [G 99.9 1.1E-25 2.4E-30 154.9 11.2 246 17-294 26-275 (277)
57 COG1506 DAP2 Dipeptidyl aminop 99.9 7.1E-25 1.5E-29 187.1 18.9 248 9-298 363-619 (620)
58 KOG1552 Predicted alpha/beta h 99.9 1.6E-24 3.5E-29 156.6 16.2 219 12-298 36-255 (258)
59 PF12695 Abhydrolase_5: Alpha/ 99.9 8E-24 1.7E-28 149.0 17.3 145 39-271 1-145 (145)
60 COG0429 Predicted hydrolase of 99.9 3.1E-23 6.7E-28 155.1 20.3 280 10-297 48-342 (345)
61 PRK11071 esterase YqiA; Provis 99.9 3.9E-23 8.6E-28 150.3 18.6 185 38-293 2-189 (190)
62 PF01738 DLH: Dienelactone hyd 99.9 2.8E-23 6.1E-28 155.9 17.9 201 25-296 2-218 (218)
63 PF00326 Peptidase_S9: Prolyl 99.9 3.7E-23 8.1E-28 154.9 15.3 202 55-298 4-212 (213)
64 PRK11460 putative hydrolase; P 99.9 1.9E-22 4.2E-27 151.7 19.1 185 34-299 13-212 (232)
65 TIGR01838 PHA_synth_I poly(R)- 99.9 1.6E-22 3.5E-27 166.5 19.2 249 23-279 173-463 (532)
66 PF00561 Abhydrolase_1: alpha/ 99.9 4.4E-24 9.5E-29 162.6 8.8 205 66-279 1-223 (230)
67 TIGR03101 hydr2_PEP hydrolase, 99.9 1.6E-22 3.5E-27 153.1 16.6 129 17-149 5-136 (266)
68 KOG2564 Predicted acetyltransf 99.9 3E-23 6.4E-28 150.4 10.2 258 17-296 53-328 (343)
69 KOG1838 Alpha/beta hydrolase [ 99.9 2E-21 4.4E-26 151.0 21.0 284 6-297 88-390 (409)
70 PF06500 DUF1100: Alpha/beta h 99.9 4.3E-21 9.3E-26 150.4 21.8 240 8-296 162-410 (411)
71 PF05448 AXE1: Acetyl xylan es 99.9 5E-21 1.1E-25 149.2 22.1 246 8-295 53-320 (320)
72 PRK07868 acyl-CoA synthetase; 99.9 2.2E-21 4.8E-26 174.8 22.2 265 23-298 48-364 (994)
73 COG0412 Dienelactone hydrolase 99.9 9.7E-21 2.1E-25 141.7 22.0 211 14-297 5-235 (236)
74 KOG4667 Predicted esterase [Li 99.9 9.7E-22 2.1E-26 137.0 15.0 243 12-295 11-258 (269)
75 PLN02442 S-formylglutathione h 99.9 7.4E-21 1.6E-25 147.6 21.3 213 16-273 24-264 (283)
76 TIGR02821 fghA_ester_D S-formy 99.9 1.4E-20 3E-25 146.0 22.8 225 18-295 21-274 (275)
77 PLN00021 chlorophyllase 99.9 9.4E-21 2E-25 147.5 19.3 210 22-300 37-288 (313)
78 COG0596 MhpC Predicted hydrola 99.9 5.1E-20 1.1E-24 143.7 19.4 253 19-292 7-279 (282)
79 TIGR01840 esterase_phb esteras 99.9 1.8E-20 3.9E-25 139.8 15.2 122 27-148 2-131 (212)
80 TIGR00976 /NonD putative hydro 99.9 1.8E-20 4E-25 158.8 17.0 132 17-151 2-136 (550)
81 COG2945 Predicted hydrolase of 99.9 8.2E-20 1.8E-24 125.5 16.7 186 23-293 15-205 (210)
82 PF06342 DUF1057: Alpha/beta h 99.9 5.7E-19 1.2E-23 129.7 20.8 220 15-255 10-238 (297)
83 PF02230 Abhydrolase_2: Phosph 99.8 1E-19 2.2E-24 136.1 16.8 185 34-295 11-215 (216)
84 PRK10115 protease 2; Provision 99.8 8.6E-19 1.9E-23 150.9 22.3 255 8-300 413-680 (686)
85 PF02273 Acyl_transf_2: Acyl t 99.8 1.2E-17 2.5E-22 119.4 21.9 231 12-274 3-240 (294)
86 PF02129 Peptidase_S15: X-Pro 99.8 1.1E-18 2.5E-23 135.2 16.6 129 20-151 1-140 (272)
87 KOG2931 Differentiation-relate 99.8 7.8E-18 1.7E-22 123.6 19.6 267 11-295 22-306 (326)
88 PRK10162 acetyl esterase; Prov 99.8 4.3E-17 9.3E-22 128.9 25.4 245 11-297 57-317 (318)
89 COG2021 MET2 Homoserine acetyl 99.8 1E-18 2.2E-23 133.4 15.4 261 20-294 34-367 (368)
90 COG3208 GrsT Predicted thioest 99.8 5.1E-18 1.1E-22 122.3 17.9 224 35-293 5-234 (244)
91 PF03096 Ndr: Ndr family; Int 99.8 1.6E-18 3.5E-23 129.2 15.3 261 14-294 2-278 (283)
92 TIGR01849 PHB_depoly_PhaZ poly 99.8 1.5E-17 3.2E-22 132.1 20.6 248 37-294 102-405 (406)
93 COG3458 Acetyl esterase (deace 99.8 1.5E-18 3.3E-23 125.7 12.7 243 9-295 54-317 (321)
94 COG4757 Predicted alpha/beta h 99.8 3E-18 6.4E-23 121.3 13.1 257 14-292 8-280 (281)
95 TIGR01839 PHA_synth_II poly(R) 99.8 6.1E-17 1.3E-21 132.3 20.1 242 23-273 200-483 (560)
96 COG0400 Predicted esterase [Ge 99.8 1.6E-17 3.6E-22 120.1 14.9 180 35-295 16-205 (207)
97 KOG2624 Triglyceride lipase-ch 99.8 6.5E-17 1.4E-21 128.1 19.4 287 6-296 43-399 (403)
98 PF12146 Hydrolase_4: Putative 99.8 3.7E-18 8.1E-23 103.9 8.3 79 21-101 1-79 (79)
99 PF08538 DUF1749: Protein of u 99.8 8E-17 1.7E-21 121.4 15.7 246 35-293 31-303 (303)
100 PF12715 Abhydrolase_7: Abhydr 99.8 1.9E-17 4.2E-22 127.8 12.7 144 5-149 82-262 (390)
101 TIGR03230 lipo_lipase lipoprot 99.7 6E-17 1.3E-21 130.0 13.8 114 35-149 39-156 (442)
102 PF06821 Ser_hydrolase: Serine 99.7 1.7E-16 3.7E-21 112.5 13.3 155 40-275 1-157 (171)
103 cd00707 Pancreat_lipase_like P 99.7 3.2E-17 7E-22 126.3 10.4 114 35-149 34-149 (275)
104 PF05728 UPF0227: Uncharacteri 99.7 2.8E-15 6E-20 107.3 18.5 182 40-292 2-186 (187)
105 PF12740 Chlorophyllase2: Chlo 99.7 4E-15 8.6E-20 110.3 17.7 115 26-149 6-133 (259)
106 PF07859 Abhydrolase_3: alpha/ 99.7 2E-15 4.3E-20 113.2 15.7 101 40-149 1-112 (211)
107 KOG3043 Predicted hydrolase re 99.7 3.6E-15 7.8E-20 105.5 14.5 196 24-296 28-241 (242)
108 PF10230 DUF2305: Uncharacteri 99.7 1.3E-14 2.7E-19 111.2 18.0 113 37-150 2-125 (266)
109 COG0657 Aes Esterase/lipase [L 99.7 2.5E-14 5.4E-19 113.6 19.3 237 18-293 58-308 (312)
110 COG3571 Predicted hydrolase of 99.7 6E-14 1.3E-18 93.7 17.6 187 35-294 12-210 (213)
111 PRK05371 x-prolyl-dipeptidyl a 99.6 1.7E-14 3.6E-19 125.5 18.5 228 56-299 270-523 (767)
112 PF00975 Thioesterase: Thioest 99.6 1.5E-14 3.3E-19 109.8 16.0 102 38-148 1-105 (229)
113 COG2936 Predicted acyl esteras 99.6 1.5E-14 3.4E-19 117.9 16.3 141 8-151 16-163 (563)
114 KOG4627 Kynurenine formamidase 99.6 9.6E-15 2.1E-19 101.7 12.0 197 21-277 53-253 (270)
115 KOG2100 Dipeptidyl aminopeptid 99.6 5.5E-14 1.2E-18 121.9 19.0 232 19-298 505-750 (755)
116 KOG1515 Arylacetamide deacetyl 99.6 2.8E-13 6E-18 105.5 20.8 248 15-295 65-335 (336)
117 PF10503 Esterase_phd: Esteras 99.6 2.7E-14 5.9E-19 104.7 14.2 125 24-148 1-133 (220)
118 PF03403 PAF-AH_p_II: Platelet 99.6 2E-13 4.4E-18 109.5 19.2 190 35-298 98-361 (379)
119 TIGR03502 lipase_Pla1_cef extr 99.6 1.8E-14 4E-19 123.1 14.0 135 14-149 420-603 (792)
120 KOG2281 Dipeptidyl aminopeptid 99.6 1.9E-13 4.1E-18 111.0 18.5 243 4-294 606-866 (867)
121 COG3243 PhaC Poly(3-hydroxyalk 99.6 8.9E-14 1.9E-18 108.2 15.8 264 28-299 97-403 (445)
122 KOG2565 Predicted hydrolases o 99.6 1.3E-13 2.7E-18 105.0 16.1 123 16-145 128-262 (469)
123 PF09752 DUF2048: Uncharacteri 99.6 1.4E-12 3.1E-17 100.2 19.2 248 24-292 77-346 (348)
124 PF08840 BAAT_C: BAAT / Acyl-C 99.6 3.5E-14 7.6E-19 105.2 10.3 178 94-297 4-212 (213)
125 PF06057 VirJ: Bacterial virul 99.6 1.6E-13 3.4E-18 96.1 12.6 103 38-149 3-109 (192)
126 PF06028 DUF915: Alpha/beta hy 99.5 2.7E-12 5.8E-17 96.6 16.8 207 36-292 10-252 (255)
127 PF07224 Chlorophyllase: Chlor 99.5 9.4E-13 2E-17 95.8 13.4 119 23-150 32-160 (307)
128 COG4099 Predicted peptidase [G 99.5 2.1E-12 4.5E-17 95.6 14.9 124 19-148 169-305 (387)
129 COG4188 Predicted dienelactone 99.5 5.3E-13 1.2E-17 102.8 12.2 225 21-279 49-302 (365)
130 COG3545 Predicted esterase of 99.5 6.1E-12 1.3E-16 86.1 15.6 175 38-294 3-178 (181)
131 PTZ00472 serine carboxypeptida 99.5 1.5E-11 3.2E-16 101.6 21.0 128 21-150 60-219 (462)
132 KOG2551 Phospholipase/carboxyh 99.5 4.9E-12 1.1E-16 89.9 15.5 183 36-298 4-223 (230)
133 PF03959 FSH1: Serine hydrolas 99.4 2.8E-12 6.2E-17 95.3 13.0 167 36-274 3-204 (212)
134 KOG3975 Uncharacterized conser 99.4 3.2E-11 7E-16 87.0 15.3 266 17-292 6-300 (301)
135 COG3509 LpqC Poly(3-hydroxybut 99.4 5.9E-11 1.3E-15 88.4 16.1 131 15-147 38-179 (312)
136 KOG2112 Lysophospholipase [Lip 99.4 3.4E-11 7.3E-16 85.2 13.3 182 37-294 3-203 (206)
137 PF03583 LIP: Secretory lipase 99.4 7.8E-11 1.7E-15 91.6 16.7 228 55-300 16-286 (290)
138 PRK04940 hypothetical protein; 99.4 7.3E-11 1.6E-15 82.8 14.1 175 40-293 2-178 (180)
139 PF07819 PGAP1: PGAP1-like pro 99.3 1.9E-11 4.1E-16 91.2 11.6 109 36-149 3-125 (225)
140 PRK10252 entF enterobactin syn 99.3 9E-11 2E-15 111.0 18.1 101 37-147 1068-1171(1296)
141 PF05677 DUF818: Chlamydia CHL 99.3 1.2E-09 2.6E-14 83.4 19.1 115 15-133 115-236 (365)
142 KOG3847 Phospholipase A2 (plat 99.3 3.1E-10 6.8E-15 84.9 15.1 112 35-148 116-276 (399)
143 COG3319 Thioesterase domains o 99.3 4.8E-10 1E-14 84.2 15.4 101 38-148 1-104 (257)
144 KOG3101 Esterase D [General fu 99.3 2E-10 4.4E-15 80.8 12.3 128 20-149 24-178 (283)
145 COG1505 Serine proteases of th 99.3 1E-10 2.2E-15 95.1 11.7 246 8-296 391-647 (648)
146 PF00151 Lipase: Lipase; Inte 99.2 1.5E-11 3.3E-16 96.7 6.7 115 35-150 69-190 (331)
147 PRK10439 enterobactin/ferric e 99.2 2.3E-08 5E-13 81.6 23.4 124 20-147 190-323 (411)
148 PF12048 DUF3530: Protein of u 99.2 3E-08 6.4E-13 77.8 22.7 209 12-295 62-309 (310)
149 KOG2237 Predicted serine prote 99.2 3.4E-10 7.4E-15 92.7 11.2 143 8-150 438-587 (712)
150 PF00450 Peptidase_S10: Serine 99.1 1.3E-08 2.9E-13 84.6 19.5 129 20-150 22-184 (415)
151 PF01674 Lipase_2: Lipase (cla 99.1 7.8E-11 1.7E-15 86.5 5.4 91 38-133 2-96 (219)
152 COG1770 PtrB Protease II [Amin 99.1 3.7E-09 7.9E-14 87.4 14.8 144 9-152 417-567 (682)
153 PF05990 DUF900: Alpha/beta hy 99.1 1.7E-09 3.6E-14 81.3 11.1 113 35-149 16-139 (233)
154 PF11339 DUF3141: Protein of u 99.1 1.5E-07 3.2E-12 76.2 21.1 89 55-151 91-179 (581)
155 PLN02733 phosphatidylcholine-s 99.0 1.2E-09 2.7E-14 89.0 9.2 92 53-150 109-204 (440)
156 KOG1553 Predicted alpha/beta h 99.0 2.7E-09 5.8E-14 81.1 10.1 130 13-150 216-348 (517)
157 PF00756 Esterase: Putative es 99.0 7E-09 1.5E-13 80.0 12.9 129 21-149 5-152 (251)
158 COG4814 Uncharacterized protei 99.0 5.3E-08 1.2E-12 71.0 15.2 204 38-294 46-286 (288)
159 KOG3253 Predicted alpha/beta h 99.0 2.8E-08 6.1E-13 81.2 13.7 188 36-296 175-375 (784)
160 smart00824 PKS_TE Thioesterase 98.9 5E-08 1.1E-12 73.1 13.6 96 42-147 2-102 (212)
161 COG3150 Predicted esterase [Ge 98.9 1.8E-07 3.8E-12 63.8 14.1 93 40-150 2-94 (191)
162 KOG4840 Predicted hydrolases o 98.9 3.3E-08 7.1E-13 70.5 10.4 108 37-150 36-147 (299)
163 PLN02209 serine carboxypeptida 98.9 1.5E-06 3.2E-11 71.6 21.3 128 20-149 50-214 (437)
164 PF10340 DUF2424: Protein of u 98.9 2.3E-07 5.1E-12 73.2 15.8 117 26-150 108-238 (374)
165 COG1073 Hydrolases of the alph 98.9 1.7E-07 3.7E-12 74.2 15.5 252 22-296 31-298 (299)
166 cd00312 Esterase_lipase Estera 98.8 1.8E-08 3.9E-13 85.6 9.6 124 23-149 78-215 (493)
167 PLN03016 sinapoylglucose-malat 98.8 1.4E-06 3E-11 71.7 19.7 128 21-149 49-212 (433)
168 PF11144 DUF2920: Protein of u 98.8 1.9E-06 4.1E-11 68.4 18.4 127 21-148 19-220 (403)
169 PF05705 DUF829: Eukaryotic pr 98.8 7.8E-07 1.7E-11 68.0 15.5 224 40-292 2-240 (240)
170 PF05057 DUF676: Putative seri 98.8 5.5E-08 1.2E-12 72.6 8.6 94 35-131 2-97 (217)
171 COG2272 PnbA Carboxylesterase 98.7 3.3E-08 7.2E-13 79.5 7.0 125 23-148 79-218 (491)
172 PF05577 Peptidase_S28: Serine 98.7 5.6E-07 1.2E-11 75.1 14.5 114 36-149 28-150 (434)
173 KOG1282 Serine carboxypeptidas 98.7 1.3E-05 2.9E-10 65.6 21.4 130 20-151 55-217 (454)
174 COG4782 Uncharacterized protei 98.7 3.1E-07 6.8E-12 71.0 10.4 113 35-149 114-236 (377)
175 COG1075 LipA Predicted acetylt 98.7 9E-08 1.9E-12 76.3 7.6 103 37-149 59-166 (336)
176 PF10142 PhoPQ_related: PhoPQ- 98.7 3.3E-05 7.2E-10 61.6 21.4 157 108-299 168-324 (367)
177 PF00135 COesterase: Carboxyle 98.6 5.7E-07 1.2E-11 77.6 11.7 124 23-148 108-246 (535)
178 COG0627 Predicted esterase [Ge 98.6 3.5E-06 7.6E-11 65.9 14.6 113 35-150 52-190 (316)
179 COG3946 VirJ Type IV secretory 98.6 2.6E-06 5.6E-11 66.8 13.2 90 36-134 259-348 (456)
180 KOG1551 Uncharacterized conser 98.5 4.3E-06 9.3E-11 61.7 12.7 252 23-296 101-367 (371)
181 PLN02633 palmitoyl protein thi 98.5 5.7E-06 1.2E-10 63.4 13.9 103 38-148 26-132 (314)
182 PF04301 DUF452: Protein of un 98.5 1.8E-05 3.9E-10 57.9 14.2 81 37-149 11-92 (213)
183 COG2382 Fes Enterochelin ester 98.4 1.3E-05 2.8E-10 60.9 13.2 114 35-149 96-214 (299)
184 PLN02606 palmitoyl-protein thi 98.4 8.9E-06 1.9E-10 62.3 12.3 102 38-148 27-133 (306)
185 PF07082 DUF1350: Protein of u 98.4 4.6E-06 1E-10 61.6 10.0 105 28-144 10-122 (250)
186 PF02089 Palm_thioest: Palmito 98.3 1.8E-06 4E-11 65.4 6.9 108 37-148 5-117 (279)
187 PF02450 LCAT: Lecithin:choles 98.3 1.1E-05 2.3E-10 66.1 11.2 85 53-149 66-162 (389)
188 KOG2541 Palmitoyl protein thio 98.3 3.8E-05 8.3E-10 57.1 12.0 102 38-147 24-128 (296)
189 KOG3724 Negative regulator of 98.3 1.4E-05 3.1E-10 68.1 10.9 106 37-147 89-220 (973)
190 KOG2183 Prolylcarboxypeptidase 98.2 7.7E-06 1.7E-10 64.4 8.4 108 38-148 81-203 (492)
191 PLN02213 sinapoylglucose-malat 98.2 0.00022 4.8E-09 56.8 16.7 85 66-150 2-99 (319)
192 COG4553 DepA Poly-beta-hydroxy 98.2 0.00011 2.4E-09 55.4 13.3 117 25-150 91-212 (415)
193 KOG3967 Uncharacterized conser 98.2 6.8E-05 1.5E-09 53.7 11.5 111 35-150 99-230 (297)
194 PF08386 Abhydrolase_4: TAP-li 98.2 8.5E-06 1.9E-10 52.8 6.6 60 229-294 34-93 (103)
195 COG2819 Predicted hydrolase of 98.0 0.00039 8.5E-09 52.3 13.2 42 108-149 133-174 (264)
196 PF04083 Abhydro_lipase: Parti 98.0 2.7E-05 5.9E-10 44.8 5.4 48 6-53 7-59 (63)
197 KOG2182 Hydrolytic enzymes of 97.9 0.00027 5.9E-09 57.5 11.0 115 35-149 84-209 (514)
198 PF06259 Abhydrolase_8: Alpha/ 97.9 0.0013 2.8E-08 47.0 13.3 120 27-148 10-145 (177)
199 cd00741 Lipase Lipase. Lipase 97.8 8.5E-05 1.8E-09 52.4 6.6 58 90-149 8-69 (153)
200 KOG2521 Uncharacterized conser 97.6 0.003 6.6E-08 50.1 13.1 238 39-300 40-295 (350)
201 PLN02517 phosphatidylcholine-s 97.6 0.00018 3.9E-09 60.3 6.2 90 55-148 159-264 (642)
202 PF11187 DUF2974: Protein of u 97.4 0.00071 1.5E-08 50.6 7.1 39 111-149 83-125 (224)
203 KOG4388 Hormone-sensitive lipa 97.4 0.0014 3E-08 54.6 8.6 114 25-149 384-510 (880)
204 cd00519 Lipase_3 Lipase (class 97.4 0.0014 3E-08 49.8 8.1 57 89-147 107-168 (229)
205 PF01764 Lipase_3: Lipase (cla 97.3 0.00061 1.3E-08 47.3 5.6 36 95-132 49-84 (140)
206 PF01083 Cutinase: Cutinase; 97.3 0.00094 2E-08 48.2 5.9 106 39-149 7-124 (179)
207 COG2939 Carboxypeptidase C (ca 97.2 0.0011 2.4E-08 54.4 6.4 117 30-148 94-237 (498)
208 KOG2369 Lecithin:cholesterol a 97.2 0.0015 3.2E-08 53.2 6.5 74 54-135 126-205 (473)
209 PF07519 Tannase: Tannase and 97.2 0.012 2.7E-07 49.6 12.2 130 17-150 8-153 (474)
210 PF11288 DUF3089: Protein of u 97.1 0.0014 3E-08 47.9 5.0 75 57-133 38-116 (207)
211 KOG1516 Carboxylesterase and r 97.0 0.0071 1.5E-07 52.6 10.0 124 23-149 96-234 (545)
212 TIGR03712 acc_sec_asp2 accesso 96.9 0.18 3.9E-06 41.9 17.6 122 15-149 269-392 (511)
213 COG4947 Uncharacterized protei 96.9 0.012 2.5E-07 41.1 8.1 39 111-149 100-138 (227)
214 PF05576 Peptidase_S37: PS-10 96.9 0.0023 5.1E-08 51.2 5.5 108 35-148 61-170 (448)
215 PF06441 EHN: Epoxide hydrolas 96.8 0.0052 1.1E-07 40.2 5.7 40 13-53 69-108 (112)
216 PLN02162 triacylglycerol lipas 96.7 0.0063 1.4E-07 50.0 6.7 22 110-131 276-297 (475)
217 PLN00413 triacylglycerol lipas 96.7 0.0071 1.5E-07 49.8 6.7 22 110-131 282-303 (479)
218 PLN02454 triacylglycerol lipas 96.6 0.01 2.2E-07 48.3 7.3 40 91-132 207-248 (414)
219 PF06850 PHB_depo_C: PHB de-po 96.5 0.005 1.1E-07 44.0 4.5 65 229-294 134-201 (202)
220 KOG1283 Serine carboxypeptidas 96.5 0.042 9.1E-07 42.6 9.4 132 18-151 10-170 (414)
221 PLN02571 triacylglycerol lipas 96.4 0.0054 1.2E-07 49.9 4.6 20 113-132 227-246 (413)
222 COG2830 Uncharacterized protei 96.4 0.054 1.2E-06 37.4 8.6 80 36-147 10-90 (214)
223 PLN02310 triacylglycerol lipas 96.3 0.016 3.5E-07 47.1 6.7 21 112-132 209-229 (405)
224 PLN02408 phospholipase A1 96.1 0.0098 2.1E-07 47.7 4.6 21 112-132 200-220 (365)
225 KOG1202 Animal-type fatty acid 96.1 0.032 6.9E-07 51.2 8.0 99 35-149 2121-2221(2376)
226 PLN02934 triacylglycerol lipas 96.0 0.013 2.8E-07 48.7 4.7 22 110-131 319-340 (515)
227 PLN03037 lipase class 3 family 95.8 0.016 3.4E-07 48.4 4.7 39 92-132 300-338 (525)
228 PLN02324 triacylglycerol lipas 95.7 0.026 5.6E-07 46.0 5.4 21 112-132 215-235 (415)
229 PF05277 DUF726: Protein of un 95.6 0.048 1E-06 43.6 6.4 40 110-149 218-262 (345)
230 PF03283 PAE: Pectinacetyleste 95.4 0.5 1.1E-05 38.6 11.6 56 93-148 137-196 (361)
231 PLN02802 triacylglycerol lipas 95.4 0.034 7.4E-07 46.4 5.1 21 112-132 330-350 (509)
232 COG4287 PqaA PhoPQ-activated p 95.3 0.16 3.6E-06 40.4 8.3 64 226-297 326-389 (507)
233 KOG4372 Predicted alpha/beta h 95.3 0.023 4.9E-07 45.7 3.7 87 35-130 78-168 (405)
234 PLN02753 triacylglycerol lipas 95.2 0.036 7.7E-07 46.5 4.7 21 111-131 311-331 (531)
235 PF08237 PE-PPE: PE-PPE domain 95.1 0.13 2.8E-06 38.7 7.1 64 65-132 2-68 (225)
236 PLN02719 triacylglycerol lipas 95.1 0.038 8.2E-07 46.2 4.6 20 112-131 298-317 (518)
237 PLN02847 triacylglycerol lipas 95.1 0.047 1E-06 46.5 5.0 24 109-132 248-271 (633)
238 PLN02761 lipase class 3 family 95.1 0.053 1.2E-06 45.4 5.3 20 112-131 294-313 (527)
239 KOG4569 Predicted lipase [Lipi 94.9 0.047 1E-06 44.0 4.6 37 90-132 155-191 (336)
240 KOG4540 Putative lipase essent 94.4 0.12 2.6E-06 39.5 5.3 37 108-146 272-308 (425)
241 COG5153 CVT17 Putative lipase 94.4 0.12 2.6E-06 39.5 5.3 37 108-146 272-308 (425)
242 KOG2029 Uncharacterized conser 92.2 0.38 8.2E-06 41.0 5.4 56 92-147 506-572 (697)
243 PF07519 Tannase: Tannase and 92.2 0.29 6.4E-06 41.6 5.0 67 229-297 353-429 (474)
244 PF09949 DUF2183: Uncharacteri 92.1 1.9 4.1E-05 27.7 7.4 82 55-142 14-97 (100)
245 PF09994 DUF2235: Uncharacteri 91.8 2 4.2E-05 33.8 8.8 95 37-132 1-112 (277)
246 COG3673 Uncharacterized conser 90.8 4.3 9.3E-05 32.1 9.3 97 35-132 29-142 (423)
247 KOG4389 Acetylcholinesterase/B 90.5 1.2 2.7E-05 37.2 6.6 120 23-148 120-256 (601)
248 PF06309 Torsin: Torsin; Inte 86.8 5.7 0.00012 26.8 6.7 59 35-103 50-116 (127)
249 PRK12467 peptide synthase; Pro 84.5 11 0.00024 41.9 11.1 98 37-144 3692-3792(3956)
250 KOG2385 Uncharacterized conser 84.4 4.5 9.8E-05 34.3 6.5 40 110-149 445-489 (633)
251 cd01714 ETF_beta The electron 83.9 7.1 0.00015 29.1 7.0 72 57-143 68-145 (202)
252 COG0529 CysC Adenylylsulfate k 83.4 15 0.00032 26.6 8.7 39 35-73 20-59 (197)
253 PF05576 Peptidase_S37: PS-10 81.1 1.9 4.2E-05 35.4 3.2 70 220-293 342-412 (448)
254 COG4822 CbiK Cobalamin biosynt 80.2 16 0.00035 27.1 7.2 42 35-76 136-178 (265)
255 PF12242 Eno-Rase_NADH_b: NAD( 80.0 6.6 0.00014 23.6 4.4 45 89-133 16-61 (78)
256 cd03818 GT1_ExpC_like This fam 79.5 19 0.00041 30.1 8.9 37 40-79 2-38 (396)
257 PLN02748 tRNA dimethylallyltra 79.1 17 0.00038 31.0 8.3 79 35-120 19-120 (468)
258 PF10081 Abhydrolase_9: Alpha/ 76.9 4.5 9.8E-05 31.5 4.0 48 102-149 99-149 (289)
259 PF01583 APS_kinase: Adenylyls 74.1 6.2 0.00014 27.8 3.8 37 37-73 1-38 (156)
260 PRK02399 hypothetical protein; 73.5 53 0.0012 27.5 10.4 101 41-143 6-128 (406)
261 cd03146 GAT1_Peptidase_E Type 73.4 18 0.00039 27.2 6.4 41 35-75 29-70 (212)
262 PLN02840 tRNA dimethylallyltra 73.3 28 0.00061 29.3 7.9 79 35-120 18-119 (421)
263 PF10605 3HBOH: 3HB-oligomer h 73.1 3 6.5E-05 36.1 2.4 46 229-274 555-606 (690)
264 PRK00091 miaA tRNA delta(2)-is 73.1 23 0.0005 28.5 7.2 65 38-105 4-91 (307)
265 PF00448 SRP54: SRP54-type pro 72.6 23 0.0005 26.2 6.7 72 57-143 75-148 (196)
266 PF06792 UPF0261: Uncharacteri 72.1 58 0.0013 27.3 9.8 100 42-143 5-126 (403)
267 COG3340 PepE Peptidase E [Amin 72.1 14 0.00029 27.6 5.2 37 37-73 32-70 (224)
268 TIGR02069 cyanophycinase cyano 72.0 24 0.00053 27.3 6.9 40 35-74 26-66 (250)
269 PRK05282 (alpha)-aspartyl dipe 71.5 19 0.00042 27.5 6.2 39 36-74 30-70 (233)
270 PF08484 Methyltransf_14: C-me 70.0 27 0.00059 24.8 6.3 49 93-145 54-102 (160)
271 cd07198 Patatin Patatin-like p 69.6 9.7 0.00021 27.4 4.2 25 110-134 24-48 (172)
272 PF13207 AAA_17: AAA domain; P 69.0 7.9 0.00017 25.7 3.4 37 40-79 1-40 (121)
273 cd07225 Pat_PNPLA6_PNPLA7 Pata 68.4 9.2 0.0002 30.7 4.1 24 110-133 41-64 (306)
274 cd07207 Pat_ExoU_VipD_like Exo 68.2 10 0.00022 27.9 4.1 24 110-133 25-48 (194)
275 PF14606 Lipase_GDSL_3: GDSL-l 68.0 19 0.00042 26.1 5.2 29 88-118 72-100 (178)
276 PRK14729 miaA tRNA delta(2)-is 68.0 43 0.00093 26.8 7.6 74 40-120 6-101 (300)
277 PRK10279 hypothetical protein; 67.0 9.2 0.0002 30.5 3.8 24 110-133 31-54 (300)
278 COG1087 GalE UDP-glucose 4-epi 66.9 35 0.00076 27.2 6.7 37 41-80 3-39 (329)
279 cd07210 Pat_hypo_W_succinogene 65.3 14 0.0003 28.0 4.4 24 110-133 26-49 (221)
280 smart00827 PKS_AT Acyl transfe 64.5 9.3 0.0002 30.4 3.6 22 110-131 80-101 (298)
281 COG1752 RssA Predicted esteras 63.8 12 0.00025 30.1 4.0 24 110-133 37-60 (306)
282 cd07227 Pat_Fungal_NTE1 Fungal 63.4 14 0.00029 29.0 4.1 24 110-133 36-59 (269)
283 PF00698 Acyl_transf_1: Acyl t 63.3 5.7 0.00012 32.0 2.1 22 110-131 82-103 (318)
284 TIGR03131 malonate_mdcH malona 63.3 10 0.00022 30.2 3.6 22 110-131 74-95 (295)
285 COG1448 TyrB Aspartate/tyrosin 61.8 93 0.002 25.8 10.4 89 36-147 170-265 (396)
286 cd07228 Pat_NTE_like_bacteria 61.2 20 0.00043 25.9 4.5 25 110-134 26-50 (175)
287 COG2240 PdxK Pyridoxal/pyridox 61.2 80 0.0017 24.9 10.6 97 43-151 11-117 (281)
288 COG0324 MiaA tRNA delta(2)-iso 60.6 82 0.0018 25.4 7.8 76 38-120 3-101 (308)
289 KOG1252 Cystathionine beta-syn 60.4 50 0.0011 26.8 6.6 58 16-75 188-249 (362)
290 PRK14974 cell division protein 59.6 82 0.0018 25.8 8.0 66 63-143 220-287 (336)
291 cd07209 Pat_hypo_Ecoli_Z1214_l 59.4 17 0.00036 27.4 3.9 25 110-134 24-48 (215)
292 PF06833 MdcE: Malonate decarb 59.1 29 0.00063 26.4 5.0 60 66-131 66-128 (234)
293 KOG1200 Mitochondrial/plastidi 58.9 73 0.0016 23.7 7.4 33 40-75 16-48 (256)
294 TIGR00521 coaBC_dfp phosphopan 58.9 1.1E+02 0.0024 25.8 9.0 73 55-132 132-224 (390)
295 PF00326 Peptidase_S9: Prolyl 58.4 73 0.0016 23.7 7.3 43 36-78 143-187 (213)
296 TIGR00174 miaA tRNA isopenteny 57.4 46 0.00099 26.5 6.0 74 40-120 1-97 (287)
297 TIGR02884 spore_pdaA delta-lac 57.3 13 0.00029 28.1 3.1 34 38-72 187-221 (224)
298 TIGR00128 fabD malonyl CoA-acy 57.2 14 0.0003 29.3 3.4 22 111-132 82-103 (290)
299 KOG0781 Signal recognition par 57.2 37 0.0008 29.0 5.6 88 41-143 442-538 (587)
300 cd05312 NAD_bind_1_malic_enz N 57.1 22 0.00047 28.0 4.2 82 40-130 27-124 (279)
301 cd07205 Pat_PNPLA6_PNPLA7_NTE1 56.6 26 0.00057 25.2 4.5 24 110-133 26-49 (175)
302 TIGR03709 PPK2_rel_1 polyphosp 56.5 16 0.00034 28.6 3.3 70 36-123 54-125 (264)
303 COG1073 Hydrolases of the alph 55.9 0.57 1.2E-05 36.9 -4.7 108 37-147 88-199 (299)
304 PRK05579 bifunctional phosphop 55.4 1.1E+02 0.0025 25.7 8.3 58 55-119 136-196 (399)
305 PF03681 UPF0150: Uncharacteri 54.9 24 0.00052 18.8 3.1 35 63-103 11-45 (48)
306 TIGR02764 spore_ybaN_pdaB poly 54.9 10 0.00022 27.8 2.1 34 38-72 152-188 (191)
307 TIGR03707 PPK2_P_aer polyphosp 54.3 17 0.00038 27.6 3.2 71 36-124 29-101 (230)
308 COG3727 Vsr DNA G:T-mismatch r 53.9 41 0.00088 22.9 4.4 16 56-71 99-114 (150)
309 TIGR01425 SRP54_euk signal rec 53.9 75 0.0016 27.1 7.0 68 61-143 178-247 (429)
310 cd07230 Pat_TGL4-5_like Triacy 53.4 16 0.00035 30.8 3.2 27 110-136 99-125 (421)
311 TIGR02873 spore_ylxY probable 51.5 15 0.00034 28.7 2.7 34 38-72 231-264 (268)
312 COG0541 Ffh Signal recognition 51.1 1.1E+02 0.0025 25.9 7.4 69 61-144 178-248 (451)
313 cd07212 Pat_PNPLA9 Patatin-lik 51.0 16 0.00034 29.5 2.7 19 115-133 35-53 (312)
314 PF03976 PPK2: Polyphosphate k 50.9 8.4 0.00018 29.3 1.1 39 36-74 29-68 (228)
315 PF11713 Peptidase_C80: Peptid 50.6 12 0.00027 26.5 1.8 56 69-124 57-116 (157)
316 PF00004 AAA: ATPase family as 50.6 73 0.0016 21.2 6.8 52 41-103 1-53 (132)
317 PF03853 YjeF_N: YjeF-related 50.4 27 0.00058 25.1 3.6 36 35-71 23-58 (169)
318 PF04084 ORC2: Origin recognit 50.2 1.1E+02 0.0024 24.9 7.3 31 41-72 57-89 (326)
319 PF10686 DUF2493: Protein of u 49.3 37 0.00081 20.2 3.5 32 37-71 31-63 (71)
320 COG3933 Transcriptional antite 49.2 1.3E+02 0.0029 25.6 7.5 76 36-130 108-183 (470)
321 PRK06171 sorbitol-6-phosphate 48.9 56 0.0012 25.3 5.6 33 40-75 11-43 (266)
322 cd07232 Pat_PLPL Patain-like p 48.2 17 0.00036 30.6 2.5 28 110-137 93-120 (407)
323 cd07224 Pat_like Patatin-like 48.1 36 0.00077 26.1 4.1 22 113-134 30-51 (233)
324 cd07208 Pat_hypo_Ecoli_yjju_li 47.6 32 0.0007 26.9 4.0 23 113-135 28-50 (266)
325 PRK00131 aroK shikimate kinase 47.1 26 0.00056 25.0 3.2 34 37-73 3-37 (175)
326 KOG2170 ATPase of the AAA+ sup 46.5 22 0.00047 28.3 2.7 19 35-53 107-125 (344)
327 PF05724 TPMT: Thiopurine S-me 46.3 21 0.00046 27.0 2.6 28 40-73 40-67 (218)
328 KOG1199 Short-chain alcohol de 46.2 1.1E+02 0.0024 22.1 6.1 85 37-128 8-98 (260)
329 PF02230 Abhydrolase_2: Phosph 46.2 77 0.0017 23.7 5.7 58 37-102 155-214 (216)
330 PF12000 Glyco_trans_4_3: Gkyc 46.0 1.1E+02 0.0024 22.2 6.0 67 64-135 19-88 (171)
331 PRK13690 hypothetical protein; 45.5 57 0.0012 23.5 4.3 35 88-122 2-36 (184)
332 cd07229 Pat_TGL3_like Triacylg 44.6 29 0.00063 28.9 3.3 26 110-135 109-134 (391)
333 cd07218 Pat_iPLA2 Calcium-inde 44.0 48 0.001 25.6 4.3 20 115-134 33-52 (245)
334 PF03610 EIIA-man: PTS system 43.1 96 0.0021 20.5 6.5 75 39-131 2-77 (116)
335 PF01075 Glyco_transf_9: Glyco 42.7 42 0.00091 25.7 3.9 38 35-72 103-144 (247)
336 PRK10964 ADP-heptose:LPS hepto 42.2 58 0.0012 26.3 4.8 35 36-70 177-215 (322)
337 PRK13256 thiopurine S-methyltr 42.2 21 0.00046 27.1 2.1 28 40-73 46-73 (226)
338 COG1506 DAP2 Dipeptidyl aminop 41.8 1.1E+02 0.0025 27.6 6.8 63 35-103 549-613 (620)
339 cd07206 Pat_TGL3-4-5_SDP1 Tria 41.8 34 0.00074 27.3 3.2 25 110-134 95-119 (298)
340 PF01656 CbiA: CobQ/CobB/MinD/ 41.8 35 0.00076 24.9 3.2 34 41-74 2-36 (195)
341 PF09370 TIM-br_sig_trns: TIM- 41.5 48 0.001 25.9 3.8 85 55-146 160-249 (268)
342 TIGR02816 pfaB_fam PfaB family 41.4 34 0.00074 30.0 3.4 25 109-133 262-286 (538)
343 PF00578 AhpC-TSA: AhpC/TSA fa 41.2 1E+02 0.0022 20.3 5.2 56 13-73 7-67 (124)
344 COG0426 FpaA Uncharacterized f 41.0 1.2E+02 0.0027 25.3 6.3 75 38-137 249-332 (388)
345 cd01521 RHOD_PspE2 Member of t 40.9 84 0.0018 20.4 4.6 35 35-72 63-97 (110)
346 TIGR01626 ytfJ_HI0045 conserve 40.8 1.5E+02 0.0032 21.9 7.7 53 20-73 43-102 (184)
347 COG0859 RfaF ADP-heptose:LPS h 40.8 57 0.0012 26.6 4.5 36 37-72 175-215 (334)
348 PHA02114 hypothetical protein 40.5 53 0.0011 20.8 3.2 35 37-72 82-116 (127)
349 PF14253 AbiH: Bacteriophage a 40.4 16 0.00035 28.6 1.3 17 110-126 233-249 (270)
350 COG3887 Predicted signaling pr 40.0 1E+02 0.0022 27.3 5.8 51 91-146 321-377 (655)
351 KOG1969 DNA replication checkp 39.9 1.4E+02 0.0031 27.4 6.8 36 35-73 323-359 (877)
352 KOG4231 Intracellular membrane 39.6 38 0.00082 29.1 3.3 52 63-132 414-470 (763)
353 PRK09437 bcp thioredoxin-depen 39.2 1.2E+02 0.0026 21.1 5.6 57 11-72 10-71 (154)
354 PLN02412 probable glutathione 39.0 1.1E+02 0.0024 21.9 5.3 69 1-76 1-73 (167)
355 PF06500 DUF1100: Alpha/beta h 38.8 65 0.0014 27.1 4.5 66 229-296 189-256 (411)
356 COG3621 Patatin [General funct 38.6 63 0.0014 26.1 4.1 55 66-134 9-64 (394)
357 PF05577 Peptidase_S28: Serine 38.6 68 0.0015 27.3 4.9 41 230-275 377-417 (434)
358 cd00401 AdoHcyase S-adenosyl-L 38.6 2.5E+02 0.0054 23.9 7.8 65 55-140 75-139 (413)
359 TIGR00632 vsr DNA mismatch end 38.5 50 0.0011 22.0 3.1 15 57-71 99-113 (117)
360 PRK10867 signal recognition pa 38.3 2.6E+02 0.0056 24.0 8.9 69 60-143 178-248 (433)
361 cd07231 Pat_SDP1-like Sugar-De 38.1 53 0.0011 26.5 3.7 23 110-132 94-116 (323)
362 KOG1209 1-Acyl dihydroxyaceton 38.1 55 0.0012 24.7 3.5 36 37-74 6-41 (289)
363 COG5441 Uncharacterized conser 37.5 2.2E+02 0.0047 22.9 8.9 98 40-141 4-122 (401)
364 COG0331 FabD (acyl-carrier-pro 37.2 46 0.001 26.8 3.4 22 110-131 83-104 (310)
365 COG4221 Short-chain alcohol de 37.1 62 0.0013 24.9 3.8 33 39-74 7-39 (246)
366 TIGR00959 ffh signal recogniti 36.6 2.8E+02 0.006 23.8 8.2 69 60-143 177-247 (428)
367 PF08433 KTI12: Chromatin asso 36.5 1.3E+02 0.0027 23.8 5.6 39 39-77 2-41 (270)
368 PRK06523 short chain dehydroge 36.5 1.1E+02 0.0024 23.6 5.4 32 40-74 11-42 (260)
369 TIGR02193 heptsyl_trn_I lipopo 36.5 78 0.0017 25.5 4.7 36 36-71 178-217 (319)
370 cd03129 GAT1_Peptidase_E_like 36.5 1.8E+02 0.0039 21.7 7.9 39 36-74 28-66 (210)
371 cd02022 DPCK Dephospho-coenzym 36.2 46 0.001 24.1 3.1 34 40-76 1-34 (179)
372 COG2939 Carboxypeptidase C (ca 36.1 40 0.00087 29.0 2.9 60 230-293 426-489 (498)
373 cd01523 RHOD_Lact_B Member of 35.9 86 0.0019 19.8 4.0 29 35-68 60-88 (100)
374 cd07204 Pat_PNPLA_like Patatin 35.8 76 0.0016 24.5 4.3 20 115-134 34-53 (243)
375 PRK08220 2,3-dihydroxybenzoate 35.3 1.5E+02 0.0032 22.7 5.9 33 40-75 10-42 (252)
376 COG1225 Bcp Peroxiredoxin [Pos 35.2 1.7E+02 0.0036 20.9 6.2 58 10-72 9-71 (157)
377 PRK12828 short chain dehydroge 35.2 60 0.0013 24.5 3.7 31 40-73 9-39 (239)
378 PRK00889 adenylylsulfate kinas 34.8 82 0.0018 22.6 4.2 37 37-73 3-40 (175)
379 KOG2728 Uncharacterized conser 34.7 1.7E+02 0.0038 22.6 5.6 52 12-74 31-82 (302)
380 COG3946 VirJ Type IV secretory 34.7 2E+02 0.0044 24.3 6.5 94 35-135 46-144 (456)
381 cd07217 Pat17_PNPLA8_PNPLA9_li 34.7 42 0.00091 27.6 2.8 18 115-132 44-61 (344)
382 PF03205 MobB: Molybdopterin g 34.4 81 0.0017 21.8 3.9 41 40-80 2-43 (140)
383 PRK13948 shikimate kinase; Pro 34.4 59 0.0013 23.8 3.3 35 36-73 8-43 (182)
384 PRK08177 short chain dehydroge 34.4 74 0.0016 23.9 4.1 33 40-75 3-35 (225)
385 PRK09072 short chain dehydroge 34.1 65 0.0014 24.9 3.8 32 40-74 7-38 (263)
386 cd07222 Pat_PNPLA4 Patatin-lik 33.9 63 0.0014 25.0 3.6 17 115-131 34-50 (246)
387 PF01734 Patatin: Patatin-like 33.8 41 0.0009 24.3 2.6 23 110-132 25-47 (204)
388 TIGR03127 RuMP_HxlB 6-phospho 33.8 1E+02 0.0023 22.2 4.6 32 40-72 32-63 (179)
389 TIGR03607 patatin-related prot 33.7 1.1E+02 0.0024 28.2 5.4 22 110-131 64-85 (739)
390 KOG1201 Hydroxysteroid 17-beta 33.6 80 0.0017 25.2 4.0 37 38-77 38-74 (300)
391 PLN02200 adenylate kinase fami 33.6 1E+02 0.0022 23.7 4.6 34 35-71 40-74 (234)
392 cd07213 Pat17_PNPLA8_PNPLA9_li 33.3 44 0.00096 26.5 2.8 20 114-133 36-55 (288)
393 COG1255 Uncharacterized protei 33.1 51 0.0011 21.9 2.4 21 54-74 25-45 (129)
394 KOG2872 Uroporphyrinogen decar 33.0 66 0.0014 25.4 3.4 31 36-74 251-281 (359)
395 COG0218 Predicted GTPase [Gene 33.0 33 0.00072 25.4 1.8 64 223-294 129-198 (200)
396 COG0796 MurI Glutamate racemas 32.8 1.3E+02 0.0029 23.7 5.0 62 230-296 6-67 (269)
397 PRK05876 short chain dehydroge 32.7 77 0.0017 24.9 4.0 32 40-74 8-39 (275)
398 PRK07856 short chain dehydroge 32.5 1.9E+02 0.0041 22.2 6.1 33 40-75 8-40 (252)
399 cd07211 Pat_PNPLA8 Patatin-lik 32.4 38 0.00083 27.2 2.3 17 115-131 44-60 (308)
400 PF13671 AAA_33: AAA domain; P 32.4 1.5E+02 0.0033 20.1 5.1 32 40-74 1-33 (143)
401 COG0552 FtsY Signal recognitio 32.3 2.9E+02 0.0062 22.7 8.0 77 59-144 215-293 (340)
402 cd01819 Patatin_and_cPLA2 Pata 32.2 90 0.002 22.0 3.9 19 112-130 28-46 (155)
403 PRK07326 short chain dehydroge 32.2 74 0.0016 24.0 3.8 31 40-73 8-38 (237)
404 COG1598 Predicted nuclease of 32.1 1.2E+02 0.0025 18.2 3.8 35 63-103 13-47 (73)
405 PTZ00256 glutathione peroxidas 32.1 1.4E+02 0.003 21.8 5.0 54 14-73 23-82 (183)
406 cd07221 Pat_PNPLA3 Patatin-lik 31.9 95 0.0021 24.2 4.2 22 113-134 33-54 (252)
407 KOG2214 Predicted esterase of 31.8 17 0.00037 31.0 0.2 31 110-140 200-230 (543)
408 PRK07523 gluconate 5-dehydroge 31.5 79 0.0017 24.3 3.9 31 40-73 12-42 (255)
409 COG0237 CoaE Dephospho-CoA kin 31.5 94 0.002 23.2 4.0 35 39-76 3-37 (201)
410 COG1832 Predicted CoA-binding 31.5 1.3E+02 0.0028 20.8 4.2 34 41-74 19-52 (140)
411 PRK14731 coaE dephospho-CoA ki 31.2 1.1E+02 0.0023 23.0 4.3 37 36-75 3-39 (208)
412 PF00148 Oxidored_nitro: Nitro 31.1 2.8E+02 0.006 23.3 7.3 60 55-122 94-156 (398)
413 PRK08339 short chain dehydroge 31.0 86 0.0019 24.4 4.0 31 40-73 10-40 (263)
414 PRK09135 pteridine reductase; 30.8 85 0.0018 23.9 4.0 32 40-74 8-39 (249)
415 PRK06953 short chain dehydroge 30.8 91 0.002 23.3 4.0 30 41-73 4-33 (222)
416 cd00765 Pyrophosphate_PFK Phos 30.7 3.6E+02 0.0078 24.1 7.8 90 39-131 169-264 (550)
417 PRK03482 phosphoglycerate muta 30.5 2.3E+02 0.0051 21.2 6.4 39 87-129 120-158 (215)
418 PRK12429 3-hydroxybutyrate deh 30.5 74 0.0016 24.4 3.6 32 40-74 6-37 (258)
419 PRK06924 short chain dehydroge 30.0 87 0.0019 23.9 3.9 32 40-74 3-34 (251)
420 PRK14194 bifunctional 5,10-met 29.9 1.1E+02 0.0024 24.5 4.4 38 93-132 143-182 (301)
421 COG3640 CooC CO dehydrogenase 29.8 87 0.0019 24.1 3.5 34 40-73 2-37 (255)
422 PF04244 DPRP: Deoxyribodipyri 29.6 2.1E+02 0.0045 21.9 5.6 48 54-117 51-98 (224)
423 PTZ00056 glutathione peroxidas 29.4 1.7E+02 0.0037 21.8 5.1 60 11-75 19-82 (199)
424 PRK08703 short chain dehydroge 29.4 97 0.0021 23.5 4.0 31 40-73 8-38 (239)
425 PRK05717 oxidoreductase; Valid 29.3 92 0.002 23.9 3.9 31 40-73 12-42 (255)
426 PF01118 Semialdhyde_dh: Semia 29.3 72 0.0016 21.3 2.9 31 113-144 1-32 (121)
427 PF01012 ETF: Electron transfe 29.3 2.1E+02 0.0046 20.3 6.5 64 55-133 48-113 (164)
428 COG4088 Predicted nucleotide k 29.2 63 0.0014 24.3 2.7 35 39-73 2-37 (261)
429 PRK08265 short chain dehydroge 29.1 94 0.002 24.1 3.9 31 40-73 8-38 (261)
430 PRK06720 hypothetical protein; 29.1 98 0.0021 22.2 3.7 31 40-73 18-48 (169)
431 PRK08643 acetoin reductase; Va 29.0 98 0.0021 23.8 4.0 31 40-73 4-34 (256)
432 COG1856 Uncharacterized homolo 29.0 2.7E+02 0.0058 21.4 6.6 82 56-143 101-186 (275)
433 KOG1502 Flavonol reductase/cin 28.9 57 0.0012 26.5 2.6 30 39-71 7-36 (327)
434 PRK08085 gluconate 5-dehydroge 28.8 96 0.0021 23.8 4.0 31 40-73 11-41 (254)
435 KOG0855 Alkyl hydroperoxide re 28.7 2.3E+02 0.0049 20.5 5.5 56 13-72 71-131 (211)
436 KOG3086 Predicted dioxygenase 28.6 2.8E+02 0.0061 21.5 5.9 61 88-150 18-82 (296)
437 PRK07814 short chain dehydroge 28.5 98 0.0021 24.0 4.0 31 40-73 12-42 (263)
438 PLN03050 pyridoxine (pyridoxam 28.4 1.1E+02 0.0023 23.8 4.0 33 39-72 62-94 (246)
439 PRK04148 hypothetical protein; 28.4 1.2E+02 0.0025 21.0 3.7 22 111-132 17-38 (134)
440 PRK06696 uridine kinase; Valid 28.4 1.1E+02 0.0024 23.2 4.0 37 35-71 19-56 (223)
441 cd07220 Pat_PNPLA2 Patatin-lik 28.2 1.1E+02 0.0024 23.8 4.0 21 114-134 38-58 (249)
442 KOG0744 AAA+-type ATPase [Post 28.1 1E+02 0.0022 25.2 3.7 35 39-77 178-212 (423)
443 COG3911 Predicted ATPase [Gene 28.1 1.1E+02 0.0023 21.8 3.4 30 39-71 10-39 (183)
444 PRK05786 fabG 3-ketoacyl-(acyl 28.0 91 0.002 23.6 3.7 31 40-73 7-37 (238)
445 PRK12824 acetoacetyl-CoA reduc 27.9 1E+02 0.0022 23.4 3.9 32 40-74 4-35 (245)
446 KOG3035 Isoamyl acetate-hydrol 27.9 2E+02 0.0043 21.9 4.9 65 40-104 39-110 (245)
447 PRK13947 shikimate kinase; Pro 27.7 78 0.0017 22.5 3.1 31 41-74 4-35 (171)
448 TIGR01830 3oxo_ACP_reduc 3-oxo 27.6 72 0.0016 24.1 3.1 30 42-74 2-31 (239)
449 PF14403 CP_ATPgrasp_2: Circul 27.5 56 0.0012 27.9 2.5 46 29-76 179-224 (445)
450 PRK06194 hypothetical protein; 27.5 90 0.0019 24.6 3.6 31 40-73 8-38 (287)
451 PRK06550 fabG 3-ketoacyl-(acyl 27.5 1.1E+02 0.0024 23.1 4.1 32 40-74 7-38 (235)
452 PRK07035 short chain dehydroge 27.4 1E+02 0.0022 23.6 3.9 31 40-73 10-40 (252)
453 PF05673 DUF815: Protein of un 27.4 3E+02 0.0065 21.5 6.2 14 66-79 53-66 (249)
454 COG3007 Uncharacterized paraqu 27.4 1.2E+02 0.0026 24.2 3.9 41 94-134 22-64 (398)
455 PF03033 Glyco_transf_28: Glyc 27.2 59 0.0013 22.1 2.3 35 40-75 2-36 (139)
456 PF12780 AAA_8: P-loop contain 27.2 2.9E+02 0.0063 21.8 6.2 53 38-103 32-84 (268)
457 PLN02924 thymidylate kinase 27.2 1.5E+02 0.0032 22.6 4.5 42 35-76 13-55 (220)
458 PRK08945 putative oxoacyl-(acy 27.1 1.1E+02 0.0024 23.3 4.0 31 40-73 14-44 (247)
459 PF09664 DUF2399: Protein of u 27.1 89 0.0019 22.1 3.1 33 35-70 39-71 (152)
460 PLN02165 adenylate isopentenyl 27.0 3.6E+02 0.0078 22.2 7.0 74 39-119 44-141 (334)
461 PRK06762 hypothetical protein; 27.0 84 0.0018 22.3 3.1 24 38-64 2-25 (166)
462 PRK05653 fabG 3-ketoacyl-(acyl 27.0 89 0.0019 23.7 3.5 31 40-73 7-37 (246)
463 PRK06490 glutamine amidotransf 26.9 3E+02 0.0065 21.3 9.5 84 37-130 8-103 (239)
464 PRK07454 short chain dehydroge 26.9 1.1E+02 0.0023 23.3 3.9 31 40-73 8-38 (241)
465 TIGR03708 poly_P_AMP_trns poly 26.9 1E+02 0.0022 26.9 3.9 41 35-75 37-78 (493)
466 PRK05368 homoserine O-succinyl 26.9 80 0.0017 25.4 3.1 36 91-132 119-154 (302)
467 PRK12745 3-ketoacyl-(acyl-carr 26.9 1.1E+02 0.0023 23.5 3.9 32 40-74 4-35 (256)
468 KOG2585 Uncharacterized conser 26.8 1.5E+02 0.0032 25.3 4.6 37 35-72 264-300 (453)
469 PRK13728 conjugal transfer pro 26.7 1.5E+02 0.0033 21.7 4.3 54 14-76 56-110 (181)
470 PRK07069 short chain dehydroge 26.7 1E+02 0.0022 23.5 3.8 31 41-74 2-32 (251)
471 PRK07024 short chain dehydroge 26.6 1E+02 0.0022 23.7 3.8 32 40-74 4-35 (257)
472 PRK07933 thymidylate kinase; V 26.6 1.5E+02 0.0032 22.4 4.4 40 40-79 2-42 (213)
473 PRK08226 short chain dehydroge 26.6 1.1E+02 0.0024 23.6 3.9 32 40-74 8-39 (263)
474 COG0300 DltE Short-chain dehyd 26.5 1.1E+02 0.0023 24.2 3.6 32 40-74 8-39 (265)
475 cd03131 GATase1_HTS Type 1 glu 26.4 27 0.00058 25.3 0.4 37 90-132 81-117 (175)
476 PRK00081 coaE dephospho-CoA ki 26.3 1.4E+02 0.003 22.1 4.2 34 40-76 4-37 (194)
477 PRK10673 acyl-CoA esterase; Pr 26.3 2.9E+02 0.0063 21.0 7.1 63 229-295 16-78 (255)
478 PRK07791 short chain dehydroge 26.3 3.2E+02 0.007 21.6 6.6 32 40-74 8-39 (286)
479 PRK14734 coaE dephospho-CoA ki 26.2 1.2E+02 0.0026 22.6 3.8 31 40-73 3-33 (200)
480 COG0279 GmhA Phosphoheptose is 26.2 1.1E+02 0.0024 22.0 3.3 73 41-124 44-121 (176)
481 PF13380 CoA_binding_2: CoA bi 26.2 1.7E+02 0.0038 19.4 4.2 33 43-75 5-37 (116)
482 PF01121 CoaE: Dephospho-CoA k 26.2 1.1E+02 0.0023 22.4 3.5 35 40-77 2-36 (180)
483 PTZ00445 p36-lilke protein; Pr 26.2 3E+02 0.0064 21.0 5.8 64 55-122 32-102 (219)
484 PF01580 FtsK_SpoIIIE: FtsK/Sp 26.1 2E+02 0.0044 21.3 5.1 39 41-79 41-84 (205)
485 PLN02653 GDP-mannose 4,6-dehyd 26.1 1.3E+02 0.0029 24.4 4.5 33 40-75 8-40 (340)
486 cd01971 Nitrogenase_VnfN_like 26.0 3.9E+02 0.0085 22.9 7.2 75 38-120 87-164 (427)
487 KOG3179 Predicted glutamine sy 26.0 2.9E+02 0.0063 20.8 6.0 38 87-130 73-110 (245)
488 TIGR01963 PHB_DH 3-hydroxybuty 26.0 1.2E+02 0.0025 23.3 4.0 32 40-74 3-34 (255)
489 PRK14527 adenylate kinase; Pro 26.0 63 0.0014 23.7 2.4 26 36-64 4-29 (191)
490 cd04951 GT1_WbdM_like This fam 25.9 3.5E+02 0.0077 21.8 8.8 35 40-75 3-39 (360)
491 TIGR01359 UMP_CMP_kin_fam UMP- 25.9 86 0.0019 22.6 3.0 29 40-71 1-30 (183)
492 PRK06114 short chain dehydroge 25.8 1.1E+02 0.0025 23.4 3.9 32 40-74 10-41 (254)
493 COG1763 MobB Molybdopterin-gua 25.8 1.6E+02 0.0034 21.2 4.1 39 39-77 3-42 (161)
494 cd01983 Fer4_NifH The Fer4_Nif 25.6 1.2E+02 0.0026 18.5 3.4 31 42-72 3-34 (99)
495 PF09419 PGP_phosphatase: Mito 25.6 2.3E+02 0.0049 20.5 4.9 53 61-122 36-88 (168)
496 PLN02251 pyrophosphate-depende 25.5 5E+02 0.011 23.4 8.2 94 38-134 192-292 (568)
497 PLN02752 [acyl-carrier protein 25.3 56 0.0012 26.8 2.2 18 114-131 126-143 (343)
498 PF02882 THF_DHG_CYH_C: Tetrah 25.3 1.8E+02 0.0039 20.8 4.3 40 91-132 18-59 (160)
499 PRK04220 2-phosphoglycerate ki 25.3 3.7E+02 0.008 21.8 9.6 104 36-142 90-221 (301)
500 PRK06483 dihydromonapterin red 25.3 1.1E+02 0.0025 23.0 3.8 32 40-74 4-35 (236)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-47 Score=278.90 Aligned_cols=288 Identities=60% Similarity=1.082 Sum_probs=271.0
Q ss_pred CCccceEEEeecCCeeEEEEeecCCC-CCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCC
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYI 86 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 86 (318)
++......+.+.+|..+.++.|.|.. .+++..|+++||++......+..++..|+..||.|+++|++|||.|++...+.
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 44566778899999999999999975 37888999999999987645588999999999999999999999999999998
Q ss_pred CChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhh
Q 021023 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKL 166 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (318)
.+++..++|+...++.++.+......+..++||||||.+++.++.++|+...|+|+++|.+...+...+.+.....+..+
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l 183 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLL 183 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHH
Confidence 99999999999999999888888888999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChH
Q 021023 167 CKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKA 246 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~ 246 (318)
..++|.|...+.+......++++..+.....++.++...+++....++++...++...+.++++|.+++||++|.++.+.
T Consensus 184 ~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 184 SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 99999999888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 247 VSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.++.+++...+.+.++.+|||.-|.+...+++++.+.+..+|.+||+++
T Consensus 264 ~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 264 VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998888899999999999999875
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.6e-44 Score=288.48 Aligned_cols=292 Identities=46% Similarity=0.837 Sum_probs=212.7
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCC
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY 85 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 85 (318)
+.++..++..+.+.+|.+|++..|.|.+++++++|||+||++++...|+..+++.|+++||+|+++|+||||.|++....
T Consensus 56 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 56 PSGIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred ccCcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 44566777788889999999999999765678999999999988765558899999888999999999999999876554
Q ss_pred CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
..+++++++|+.++++.+..+......+++|+||||||.+++.++.++|++++++|+++|.........+..........
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHH
Confidence 46899999999999998844333344589999999999999999999999999999999977653322222333333333
Q ss_pred hhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccCh
Q 021023 166 LCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDK 245 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~ 245 (318)
+....+.........+....+.+.............+............+....+....+.++++|+|+++|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 33333322221111111112222211111111112222222333344444444455667889999999999999999999
Q ss_pred HHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 246 AVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
+.++.+++.+..+++++++++++||.++.|+|++..+++.+.|.+||+++..
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999888666789999999999999999988788899999999998754
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2e-42 Score=276.28 Aligned_cols=297 Identities=47% Similarity=0.844 Sum_probs=209.0
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCCC-CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG 84 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 84 (318)
+.++..++..+...||.+|+|+.|.|.+. .++++|||+||++.+....+..++..|+++||+|+++|+||||.|.+...
T Consensus 27 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~ 106 (330)
T PLN02298 27 LKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA 106 (330)
T ss_pred ccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc
Confidence 34566667788889999999999987642 56789999999987654223777888988999999999999999986555
Q ss_pred CCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHh
Q 021023 85 YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLT 164 (318)
Q Consensus 85 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
...+++.+++|+.++++.+.........+++|+||||||.+++.++.++|++|+++|+++|...........+.......
T Consensus 107 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 186 (330)
T PLN02298 107 YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILT 186 (330)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHH
Confidence 44688999999999999995443334458999999999999999999999999999999998765433222222222222
Q ss_pred hhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccC
Q 021023 165 KLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTD 244 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 244 (318)
.+....+..........................++..+......................+.++++|+|+++|++|.++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp 266 (330)
T PLN02298 187 FVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTD 266 (330)
T ss_pred HHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCC
Confidence 22233332211111111111111111111112223333222233333333333333456678899999999999999999
Q ss_pred hHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhccCCch
Q 021023 245 KAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGNSR 302 (318)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~~~ 302 (318)
++.++.+++.+..+++++++++++||.++.++|+...+++.+.+.+||.++.......
T Consensus 267 ~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 267 PDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred HHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999988866678999999999999999998778889999999999987655433
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=2.2e-38 Score=247.32 Aligned_cols=269 Identities=22% Similarity=0.392 Sum_probs=187.7
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHH
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD 94 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 94 (318)
.+...||.+|.|..|.|.. .++++|+++||+++++..| ..+++.|++.||.|+++|+||||.|++......++.++++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~~~-~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSGRY-EELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccchH-HHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 5677899999999998863 6678888889999998877 9999999999999999999999999865433347777888
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhh-cCCCc
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCK-FIPTW 173 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 173 (318)
|+...++.++. .....+++++||||||.+|+.+|.++|++++++|+++|...... ......+...... ..+..
T Consensus 82 d~~~~l~~~~~--~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 155 (276)
T PHA02857 82 DVVQHVVTIKS--TYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA----VPRLNLLAAKLMGIFYPNK 155 (276)
T ss_pred HHHHHHHHHHh--hCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc----ccHHHHHHHHHHHHhCCCC
Confidence 88888887733 23456899999999999999999999999999999999764211 1111111111111 11111
Q ss_pred ccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHH
Q 021023 174 KIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFK 253 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~ 253 (318)
.... ........+.........++....................+....+.++++|+|+++|++|.++|++.++++.+
T Consensus 156 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~ 233 (276)
T PHA02857 156 IVGK--LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQ 233 (276)
T ss_pred ccCC--CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHH
Confidence 0000 00011111111111222222222111222222222222334456788999999999999999999999999988
Q ss_pred HhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 254 VASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 254 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.+. +++++.+++++||.++.|.+ +..+++++.+.+||+++
T Consensus 234 ~~~-~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 234 HAN-CNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred Hcc-CCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 874 36899999999999999876 56788999999999986
No 5
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=5.6e-37 Score=237.05 Aligned_cols=286 Identities=26% Similarity=0.412 Sum_probs=223.4
Q ss_pred cCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCC-CCCCC
Q 021023 7 HNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA-GLSGY 85 (318)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~ 85 (318)
......+..+...||..+.|..|.+.. .++.+||++||++.+...| ..++..|..+||.|+++|+||||.|. +..+.
T Consensus 5 ~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~ 82 (298)
T COG2267 5 VPRTRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQRGH 82 (298)
T ss_pred cccccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCcCC
Confidence 344566778899999999999998774 4448999999999999988 89999999999999999999999998 77777
Q ss_pred CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
..++.++..|+..+++.+.. .....+++++||||||.+++.++.+++.+|+++|+.+|....................
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~--~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~ 160 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAE--PDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKL 160 (298)
T ss_pred chhHHHHHHHHHHHHHHHhc--cCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccc
Confidence 67799999999999999832 2356799999999999999999999999999999999998774300111112222222
Q ss_pred hhhcCCCcccCC---ChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhch-hHHhhcCcccccEEEEEeCCCc
Q 021023 166 LCKFIPTWKIIP---SQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSM-DLENRLDEVSIPFIVLHGEEDK 241 (318)
Q Consensus 166 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~lii~G~~D~ 241 (318)
+....+.+.... .........+++.....+..++..........+......... ........+++|+|+++|++|.
T Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~ 240 (298)
T COG2267 161 LGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDR 240 (298)
T ss_pred ccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCc
Confidence 233333333332 123344556678888888889887777777777666665544 2334456789999999999999
Q ss_pred ccC-hHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 242 VTD-KAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
+++ .+...++++.+..+++++++++|+.|..+.|.+ ...+++.+.+.+|+.+...
T Consensus 241 vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~-~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 241 VVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPD-RAREEVLKDILAWLAEALP 296 (298)
T ss_pred cccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcc-hHHHHHHHHHHHHHHhhcc
Confidence 999 788889999998888999999999999999543 3448899999999988764
No 6
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.7e-36 Score=242.13 Aligned_cols=280 Identities=31% Similarity=0.565 Sum_probs=194.7
Q ss_pred CCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCC
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 87 (318)
+....+..+...+|..+++..|.|..++++++|||+||++++...| ..+++.|+++||+|+++|+||||.|++......
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~-~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 185 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRY-LHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVP 185 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCc
Confidence 3445666778888999999999997557788999999999988767 899999999999999999999999987765556
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC---CCcCEEEEeCCCcccccccCCchhHHHHHh
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIAENVKPHPLVISVLT 164 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
+++.+++|+.++++.+... .+..+++++||||||.+++.++. +| ++++++|+.+|....... .........
T Consensus 186 ~~~~~~~Dl~~~l~~l~~~--~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~~~ 259 (395)
T PLN02652 186 SLDYVVEDTEAFLEKIRSE--NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAVAP 259 (395)
T ss_pred CHHHHHHHHHHHHHHHHHh--CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc---hHHHHHHHH
Confidence 8889999999999998432 23458999999999999998764 55 479999999988654221 111111111
Q ss_pred hhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccC
Q 021023 165 KLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTD 244 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 244 (318)
.+....+.+..............++........++..+......................+.++++|+|+++|++|.++|
T Consensus 260 l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp 339 (395)
T PLN02652 260 IFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTD 339 (395)
T ss_pred HHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCC
Confidence 11222222221111000000111111111122233322222222222233332233456778899999999999999999
Q ss_pred hHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 245 KAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
++.++++++.+.+.+++++++++++|.++.| ...+++.+.+.+||..++.
T Consensus 340 ~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 340 PLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 9999999998865678999999999999884 2456799999999998875
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=2.6e-36 Score=240.06 Aligned_cols=278 Identities=20% Similarity=0.318 Sum_probs=187.8
Q ss_pred cceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-----C
Q 021023 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-----Y 85 (318)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~ 85 (318)
.++..+...||.+++|..+++. .++++||++||++++...| ..++..|+++||+|+++|+||||.|+.... .
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y-~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKY-AELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHHH-HHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 4456777889999999999875 4567899999999888767 889988989999999999999999975321 2
Q ss_pred CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
..+++++++|+.++++.+.. ..+..+++++||||||.+++.++.++|++++++|+++|........ +..........
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~--~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~ 183 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQ--PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNW 183 (330)
T ss_pred cccHHHHHHHHHHHHHHHHh--cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHH
Confidence 25789999999999988732 2245789999999999999999999999999999999876542211 11111111111
Q ss_pred hhhc---CCCcc-----cCCChhhhhhhhcChh----hhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEE
Q 021023 166 LCKF---IPTWK-----IIPSQDIVDVAFKLPE----KRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFI 233 (318)
Q Consensus 166 ~~~~---~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 233 (318)
.... ..... ................ ....+..++..........+..............+.++++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 263 (330)
T PRK10749 184 AEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLL 263 (330)
T ss_pred HHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEE
Confidence 1100 00000 0000000000111111 1122222222111112233333333322344466788999999
Q ss_pred EEEeCCCcccChHHHHHHHHHhcC-----CCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 234 VLHGEEDKVTDKAVSVQLFKVASS-----SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 234 ii~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
+++|++|.+++++.++.+++.+.. +++++++++++||.++.|.+ ...+++.+.|.+||+++
T Consensus 264 ii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 264 LLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-AMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc-HHHHHHHHHHHHHHhhc
Confidence 999999999999998888887632 45689999999999999765 34678999999999764
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.6e-36 Score=234.96 Aligned_cols=260 Identities=14% Similarity=0.128 Sum_probs=172.1
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCC------CCCC
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS------GYID 87 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~ 87 (318)
..+.+.+|..++|...++. .++|||+||+++++..| ..+++.|+++ |+|+++|+||||.|+.+. ...+
T Consensus 10 ~~~~~~~~~~i~y~~~G~~----~~~vlllHG~~~~~~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTS----GPALVLVHGFGGNADHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CceEEEcCeEEEEEEcCCC----CCeEEEECCCCCChhHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccC
Confidence 3455568999999887542 36799999999999988 9999999876 899999999999998653 1247
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhh
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLC 167 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (318)
+++++++|+.++++.+ +.++++++||||||.+++.+|.++|++|+++|++++....................+.
T Consensus 84 ~~~~~a~~l~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 84 TFETWGEQLNDFCSDV------VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred CHHHHHHHHHHHHHHh------cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 9999999999999998 7899999999999999999999999999999999986532111111111111111111
Q ss_pred hcCCCcc-------cCCC----hhhhhhhhcCh-----hhhHhhhhCCCCcCCccchhhHHHHh--hhchhHHhhcCccc
Q 021023 168 KFIPTWK-------IIPS----QDIVDVAFKLP-----EKRKEIRANPYCYKGRPRLKTGYELM--RVSMDLENRLDEVS 229 (318)
Q Consensus 168 ~~~~~~~-------~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~ 229 (318)
....... .... ..+....+.+. .....+.. .... ........... .........+.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~ 234 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILR-PGLE--PGAVDVFLDFISYSGGPLPEELLPAVK 234 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHh-ccCC--chHHHHHHHHhccccccchHHHHhhcC
Confidence 1000000 0000 00000000000 00000000 0000 00011111111 11112235578899
Q ss_pred ccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 230 IPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 230 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
+|+++|+|++|.++|.+.++.+.+.. +++++++++++||+++.|+|++ +.+.|.+|+++
T Consensus 235 ~P~lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 293 (294)
T PLN02824 235 CPVLIAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPEL----VNPLIESFVAR 293 (294)
T ss_pred CCeEEEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHH----HHHHHHHHHhc
Confidence 99999999999999999888866655 6689999999999999977765 99999999975
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.4e-35 Score=231.11 Aligned_cols=260 Identities=17% Similarity=0.178 Sum_probs=171.7
Q ss_pred EeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHH
Q 021023 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDD 95 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 95 (318)
+...+|.+++|..+... ..+++|||+||++++...| ..+++.|.+ +|+|+++|+||||.|+.+.. .++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~plvllHG~~~~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPGK--EGLTPLLIFNGIGANLELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred EeccCCcEEEEEEecCC--CCCCcEEEEeCCCcchHHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 45568889999876322 2346799999999999978 899999965 59999999999999986543 3689999999
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC-CCcc
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI-PTWK 174 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 174 (318)
+.++++.+ +.++++|+||||||.+++.+|.++|++|+++|++++.............. .......... ....
T Consensus 81 ~~~~i~~l------~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 153 (276)
T TIGR02240 81 AARMLDYL------DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVL-MMMASPRRYIQPSHG 153 (276)
T ss_pred HHHHHHHh------CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHH-HHhcCchhhhccccc
Confidence 99999999 77899999999999999999999999999999999886532110100000 0000000000 0000
Q ss_pred cCCChhhhhhhh-cChhhhHhhhhCCCCcCCccchhhHHHHhh-hchhHHhhcCcccccEEEEEeCCCcccChHHHHHHH
Q 021023 175 IIPSQDIVDVAF-KLPEKRKEIRANPYCYKGRPRLKTGYELMR-VSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLF 252 (318)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 252 (318)
............ .++......... . .............. ...+....+.++++|+|+++|++|.++|++.++.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 154 IHIAPDIYGGAFRRDPELAMAHASK-V--RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred cchhhhhccceeeccchhhhhhhhh-c--ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 000000000000 000000000000 0 00011111111111 111223557889999999999999999999999999
Q ss_pred HHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 253 KVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 253 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
+.+ ++++++++++ ||+++.|+|+ ++++.+.+|+++...
T Consensus 231 ~~~--~~~~~~~i~~-gH~~~~e~p~----~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 231 WRI--PNAELHIIDD-GHLFLITRAE----AVAPIIMKFLAEERQ 268 (276)
T ss_pred HhC--CCCEEEEEcC-CCchhhccHH----HHHHHHHHHHHHhhh
Confidence 888 7789999985 9999997775 499999999986543
No 10
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-34 Score=228.05 Aligned_cols=262 Identities=15% Similarity=0.125 Sum_probs=168.9
Q ss_pred EeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHH
Q 021023 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDD 95 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 95 (318)
+.+.+|.+++|..++ .+++|||+||++++...| ..+++.|++. |+|+++|+||||.|+.+... ++++++++|
T Consensus 11 ~~~~~g~~i~y~~~G-----~g~~vvllHG~~~~~~~w-~~~~~~L~~~-~~via~D~~G~G~S~~~~~~-~~~~~~a~d 82 (295)
T PRK03592 11 RVEVLGSRMAYIETG-----EGDPIVFLHGNPTSSYLW-RNIIPHLAGL-GRCLAPDLIGMGASDKPDID-YTFADHARY 82 (295)
T ss_pred EEEECCEEEEEEEeC-----CCCEEEEECCCCCCHHHH-HHHHHHHhhC-CEEEEEcCCCCCCCCCCCCC-CCHHHHHHH
Confidence 345689999999885 246799999999999988 9999999887 59999999999999876543 699999999
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC-CCcc
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI-PTWK 174 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 174 (318)
+.++++.+ +.++++++||||||.+|+.++.++|++|+++|++++....................+.... ....
T Consensus 83 l~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK03592 83 LDAWFDAL------GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEM 156 (295)
T ss_pred HHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccccc
Confidence 99999999 7889999999999999999999999999999999985432111000111111111111100 0000
Q ss_pred cCCChhhhhhhhcC-------hhhhHhhhhCCCCcCC-ccchhh---------HHHHhhhchhHHhhcCcccccEEEEEe
Q 021023 175 IIPSQDIVDVAFKL-------PEKRKEIRANPYCYKG-RPRLKT---------GYELMRVSMDLENRLDEVSIPFIVLHG 237 (318)
Q Consensus 175 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~i~~P~lii~G 237 (318)
......+....+.. +.....+......... .....+ .........+....+.++++|+|+|+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 236 (295)
T PRK03592 157 VLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINA 236 (295)
T ss_pred ccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEec
Confidence 00000000100000 0000000000000000 000000 000001112234557889999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 238 EEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 238 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
++|.++++....++..... +++++++++++||+++.|+|++ +.+.|.+|+++..
T Consensus 237 ~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~fl~~~~ 290 (295)
T PRK03592 237 EPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEE----IGAAIAAWLRRLR 290 (295)
T ss_pred cCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHH----HHHHHHHHHHHhc
Confidence 9999996555545544322 6789999999999999977754 9999999998654
No 11
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.9e-34 Score=234.20 Aligned_cols=265 Identities=16% Similarity=0.185 Sum_probs=170.5
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhH-HHHHHH---hcCcEEEEecCCCCcCCCCCCCCCCChH
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS-TAIRLA---NEGYACYGIDYQGHGKSAGLSGYIDNFD 90 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 90 (318)
.+.+.+|.+++|...+|.++..+|+|||+||++++...| .. +.+.|+ +.+|+|+++|+||||.|+.+....++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W-~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFW-TETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHH-HHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 445556789999999998655678999999999998877 53 446665 3689999999999999986654457899
Q ss_pred hHHHHHH-HHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhh--
Q 021023 91 DLVDDCF-NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLC-- 167 (318)
Q Consensus 91 ~~~~d~~-~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (318)
++++++. .+++.+ +.++++++||||||.+++.+|.++|++|+++|+++++....... ............
T Consensus 258 ~~a~~l~~~ll~~l------g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~--~~~~~~~~~~~~~~ 329 (481)
T PLN03087 258 EHLEMIERSVLERY------KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKG--VQATQYVMRKVAPR 329 (481)
T ss_pred HHHHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccc--hhHHHHHHHHhccc
Confidence 9999994 788887 78899999999999999999999999999999999865432110 000011111000
Q ss_pred hcCCCcccCCC-hhhhhhhh--------cChhhhHhh----hhCCC---------CcCCccchhhHHHHhhh-----chh
Q 021023 168 KFIPTWKIIPS-QDIVDVAF--------KLPEKRKEI----RANPY---------CYKGRPRLKTGYELMRV-----SMD 220 (318)
Q Consensus 168 ~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~-----~~~ 220 (318)
...+....... ..+..... ......... ..... .......+......... ...
T Consensus 330 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 330 RVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred ccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 00000000000 00000000 000000000 00000 00000000000000100 011
Q ss_pred HHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccc-cCCccchHHHHHHHHHHHHH
Q 021023 221 LENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLY-GEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 221 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~~~~~i~~fl~~ 294 (318)
......++++|+|+++|++|.++|++..+.+.+.+ +++++++++++||.++. |+|+. +++.+.+|...
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~----fa~~L~~F~~~ 478 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKE----FARELEEIWRR 478 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHH----HHHHHHHHhhc
Confidence 12233468999999999999999999999999998 88999999999999885 67754 88889888853
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.8e-35 Score=230.18 Aligned_cols=252 Identities=15% Similarity=0.109 Sum_probs=162.4
Q ss_pred eeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-CCCChHhHHHHHHHHH
Q 021023 22 VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDDLVDDCFNHF 100 (318)
Q Consensus 22 ~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l 100 (318)
.+++|...+++ ..|+|||+||++++...| ..+++.|+++||+|+++|+||||.|+.+.. ..++++++++|+.+++
T Consensus 34 ~~i~y~~~G~~---~~~~lvliHG~~~~~~~w-~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l 109 (302)
T PRK00870 34 LRMHYVDEGPA---DGPPVLLLHGEPSWSYLY-RKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWF 109 (302)
T ss_pred EEEEEEecCCC---CCCEEEEECCCCCchhhH-HHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 67888876543 246899999999999888 999999987899999999999999976532 2468999999999999
Q ss_pred HHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChh
Q 021023 101 TSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQD 180 (318)
Q Consensus 101 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (318)
+.+ +.++++++||||||.+++.+|.++|++|+++|++++.......... ........ .....+... ...
T Consensus 110 ~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~---~~~ 178 (302)
T PRK00870 110 EQL------DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP-DAFWAWRA-FSQYSPVLP---VGR 178 (302)
T ss_pred HHc------CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch-HHHhhhhc-ccccCchhh---HHH
Confidence 998 7889999999999999999999999999999999875322110000 00000000 000000000 000
Q ss_pred hhhhhhc---ChhhhHhhhhCCCCcCCccchhhHH---------HHhhhchhHHhhcCcccccEEEEEeCCCcccChHHH
Q 021023 181 IVDVAFK---LPEKRKEIRANPYCYKGRPRLKTGY---------ELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVS 248 (318)
Q Consensus 181 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 248 (318)
....... .......+................. ............+.++++|+++|+|++|.++|...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 257 (302)
T PRK00870 179 LVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD- 257 (302)
T ss_pred HhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-
Confidence 0000000 0000000000000000000000000 00000112234568899999999999999999866
Q ss_pred HHHHHHhcCCCce---EEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 249 VQLFKVASSSDKT---MKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 249 ~~~~~~~~~~~~~---~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
+.+.+.+ ++++ +.+++++||+++.|+|+ ++.+.+.+|++++
T Consensus 258 ~~~~~~~--~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~l~~fl~~~ 301 (302)
T PRK00870 258 AILQKRI--PGAAGQPHPTIKGAGHFLQEDSGE----ELAEAVLEFIRAT 301 (302)
T ss_pred HHHHhhc--ccccccceeeecCCCccchhhChH----HHHHHHHHHHhcC
Confidence 7777777 4444 88999999999997775 4999999999753
No 13
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-33 Score=211.37 Aligned_cols=271 Identities=17% Similarity=0.187 Sum_probs=178.0
Q ss_pred CCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-CC
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YI 86 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~ 86 (318)
.....++.+.+.+|.+++|..-++. ..|+|+++||++.+...| +.....|+.+||+|+++|+||+|.|+.+.. ..
T Consensus 18 ~~~~~~hk~~~~~gI~~h~~e~g~~---~gP~illlHGfPe~wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~ 93 (322)
T KOG4178|consen 18 NLSAISHKFVTYKGIRLHYVEGGPG---DGPIVLLLHGFPESWYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISE 93 (322)
T ss_pred ChhhcceeeEEEccEEEEEEeecCC---CCCEEEEEccCCccchhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcce
Confidence 3445567778888988888877654 578999999999999989 999999999999999999999999997766 67
Q ss_pred CChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHH-Hhh
Q 021023 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISV-LTK 165 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~-~~~ 165 (318)
|++..++.|+..+++.+ +.++++++||+||+++|+.+|..+|++|+++|+++...... ...+....... ...
T Consensus 94 Yt~~~l~~di~~lld~L------g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p-~~~~~~~~~~~f~~~ 166 (322)
T KOG4178|consen 94 YTIDELVGDIVALLDHL------GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNP-KLKPLDSSKAIFGKS 166 (322)
T ss_pred eeHHHHHHHHHHHHHHh------ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCc-ccchhhhhccccCcc
Confidence 89999999999999999 89999999999999999999999999999999998776511 00000000000 000
Q ss_pred h-hhcCCCccc-------CCChhhhhhhhcCh-----------------hhhHhhhhCCCCcCCccchhhHHHHhhhch-
Q 021023 166 L-CKFIPTWKI-------IPSQDIVDVAFKLP-----------------EKRKEIRANPYCYKGRPRLKTGYELMRVSM- 219 (318)
Q Consensus 166 ~-~~~~~~~~~-------~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 219 (318)
. ......... ...+.+...++... ...+.+........ ...+......++...
T Consensus 167 ~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~-~~g~~gplNyyrn~~r 245 (322)
T KOG4178|consen 167 YYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQ-IDGFTGPLNYYRNFRR 245 (322)
T ss_pred ceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccc-cccccccchhhHHHhh
Confidence 0 000000000 00000000000000 00001111000110 111211222222111
Q ss_pred ---hHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCc-eEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 220 ---DLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDK-TMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 220 ---~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.....+.++++|+++++|+.|.+.+.......+++.- ++. +.++++++||+...|+|++ +++.+.+|+++.
T Consensus 246 ~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v-p~l~~~vv~~~~gH~vqqe~p~~----v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 246 NWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV-PRLTERVVIEGIGHFVQQEKPQE----VNQAILGFINSF 320 (322)
T ss_pred CchhccccccccccceEEEEecCcccccchhHHHHHHHhh-ccccceEEecCCcccccccCHHH----HHHHHHHHHHhh
Confidence 1233467789999999999999988774334343332 333 7889999999999988865 999999999864
No 14
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=2e-34 Score=221.96 Aligned_cols=236 Identities=16% Similarity=0.142 Sum_probs=157.1
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccC-ceEEEE
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKE-KMRYLL 117 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~-~~~~l~ 117 (318)
+|||+||++.+...| ..+++.|.+.||+|+++|+||||.|+......++++++++|+.++++.+ +. ++++++
T Consensus 5 ~vvllHG~~~~~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~~lv 77 (255)
T PLN02965 5 HFVFVHGASHGAWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL------PPDHKVILV 77 (255)
T ss_pred EEEEECCCCCCcCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc------CCCCCEEEE
Confidence 499999999998878 9999999888999999999999999865444468999999999999998 55 599999
Q ss_pred EEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC----CCcccCCC------hhhhhhh-h
Q 021023 118 GESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI----PTWKIIPS------QDIVDVA-F 186 (318)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~-~ 186 (318)
||||||.+++.++.++|++|+++|++++....... ................. ........ ....... +
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGS-IISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYY 156 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccccCCCCC-CccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHh
Confidence 99999999999999999999999999986421110 00010110000000000 00000000 0010000 0
Q ss_pred cChhhh-HhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEe
Q 021023 187 KLPEKR-KEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLY 265 (318)
Q Consensus 187 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
...... ........ ......... ...+....+.++++|+++++|++|.++|++.++.+.+.+ ++++++++
T Consensus 157 ~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i 227 (255)
T PLN02965 157 NQSPLEDYTLSSKLL---RPAPVRAFQ----DLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVL 227 (255)
T ss_pred cCCCHHHHHHHHHhc---CCCCCcchh----hhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEe
Confidence 110000 00000000 000000000 001122345578999999999999999999999999998 78899999
Q ss_pred cCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 266 EGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 266 ~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
+++||+++.|+|++ +++.|.+|++..
T Consensus 228 ~~~GH~~~~e~p~~----v~~~l~~~~~~~ 253 (255)
T PLN02965 228 EDSDHSAFFSVPTT----LFQYLLQAVSSL 253 (255)
T ss_pred cCCCCchhhcCHHH----HHHHHHHHHHHh
Confidence 99999999988865 888888887654
No 15
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.5e-34 Score=228.15 Aligned_cols=260 Identities=17% Similarity=0.223 Sum_probs=165.2
Q ss_pred cCCe-eEEEEeecCCC-CCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHH
Q 021023 19 SRRV-KLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96 (318)
Q Consensus 19 ~~g~-~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 96 (318)
.+|. +++|...++.. ....|+|||+||++++...| ..+++.|++ +|+|+++|+||||.|+.+....++++++++++
T Consensus 68 ~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l 145 (360)
T PLN02679 68 WKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELI 145 (360)
T ss_pred ECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHH
Confidence 3565 99999887531 12347899999999999988 899999966 69999999999999987654457899999999
Q ss_pred HHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHh-hCCCCcCEEEEeCCCcccccccC-CchhHHHH---HhhhhhcCC
Q 021023 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR-KKPDYFDGAVLVAPMCKIAENVK-PHPLVISV---LTKLCKFIP 171 (318)
Q Consensus 97 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~ 171 (318)
.++++.+ +.++++|+||||||.+++.++. .+|++|+++|++++......... ..+..... ...+.....
T Consensus 146 ~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
T PLN02679 146 LDFLEEV------VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLK 219 (360)
T ss_pred HHHHHHh------cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhh
Confidence 9999988 7889999999999999999887 47999999999998653311100 00000000 000000000
Q ss_pred C--c-----ccCCChhhh----hhhhcC-----hhhhHhhhhCCCCcCCccchhhHHHHhh--hchhHHhhcCcccccEE
Q 021023 172 T--W-----KIIPSQDIV----DVAFKL-----PEKRKEIRANPYCYKGRPRLKTGYELMR--VSMDLENRLDEVSIPFI 233 (318)
Q Consensus 172 ~--~-----~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l 233 (318)
. . ......... ...+.+ ........ .+. .............. ...+....+.++++|+|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtL 296 (360)
T PLN02679 220 QRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIR-GPA--DDEGALDAFVSIVTGPPGPNPIKLIPRISLPIL 296 (360)
T ss_pred chhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHH-hhc--cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEE
Confidence 0 0 000000000 000000 00000000 000 00001111111111 11223456778999999
Q ss_pred EEEeCCCcccChHH-----HHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 234 VLHGEEDKVTDKAV-----SVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 234 ii~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
+++|++|.++|++. ...+.+.+ +++++++++++||+++.|+|++ +++.|.+||++.
T Consensus 297 ii~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~----~~~~I~~FL~~~ 357 (360)
T PLN02679 297 VLWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDL----VHEKLLPWLAQL 357 (360)
T ss_pred EEEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHH----HHHHHHHHHHhc
Confidence 99999999998863 22344445 7889999999999999977754 999999999753
No 16
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=100.00 E-value=5.2e-33 Score=220.21 Aligned_cols=269 Identities=26% Similarity=0.422 Sum_probs=193.6
Q ss_pred EeecCCeeEEEEeecCCCCCCceEEEEEccCCcccc-cch------------------------hHHHHHHHhcCcEEEE
Q 021023 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECS-IGM------------------------NSTAIRLANEGYACYG 70 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~-~~~------------------------~~~~~~l~~~g~~v~~ 70 (318)
+.+.||..|+++.|.|. .++.+|+++||++.+.. .++ ..+++.|.++||.|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 45679999999999886 67889999999998876 111 3678999999999999
Q ss_pred ecCCCCcCCCCC---CCCCCChHhHHHHHHHHHHHHHhhh-----------------hcc-CceEEEEEEchhHHHHHHH
Q 021023 71 IDYQGHGKSAGL---SGYIDNFDDLVDDCFNHFTSICEKE-----------------ENK-EKMRYLLGESMGGAMVLLL 129 (318)
Q Consensus 71 ~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~-----------------~~~-~~~~~l~G~S~Gg~~a~~~ 129 (318)
+|+||||.|.+. .....+++++++|+..+++.+++.. ... ..+++++||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 999999999854 2223488999999999999874310 112 4689999999999999999
Q ss_pred HhhCCC--------CcCEEEEeCCCcccccccC-----CchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhh
Q 021023 130 HRKKPD--------YFDGAVLVAPMCKIAENVK-----PHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR 196 (318)
Q Consensus 130 a~~~p~--------~v~~~vl~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (318)
+.++++ .++++|+++|......... .......+...+..+.+....... .....++.....+.
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKK----IRYEKSPYVNDIIK 235 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCc----cccccChhhhhHHh
Confidence 876532 5899999998865422110 011122233333344443332210 11233445556667
Q ss_pred hCCCCcCCccchhhHHHHhhhchhHHhhcCcc--cccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccc
Q 021023 197 ANPYCYKGRPRLKTGYELMRVSMDLENRLDEV--SIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLY 274 (318)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 274 (318)
.++..+.......+...++.........+.++ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|.++.
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~ 315 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITI 315 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCcc
Confidence 77776655556666666665544444455556 7899999999999999999999888876678899999999999998
Q ss_pred cCCccchHHHHHHHHHHHH
Q 021023 275 GEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 275 ~~p~~~~~~~~~~i~~fl~ 293 (318)
|. ..+++.+.+.+||+
T Consensus 316 E~---~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 316 EP---GNEEVLKKIIEWIS 331 (332)
T ss_pred CC---CHHHHHHHHHHHhh
Confidence 53 35679999999985
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=2e-33 Score=217.26 Aligned_cols=250 Identities=16% Similarity=0.144 Sum_probs=165.6
Q ss_pred eEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHH
Q 021023 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTS 102 (318)
Q Consensus 23 ~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 102 (318)
+++|+.+.+.+...+|+|||+||++++...| ..++..|++ +|+|+++|+||||.|..... ++++++++|+.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNL-GVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHH-HHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHH
Confidence 4667777676556788999999999999877 899999965 59999999999999986543 5899999999999999
Q ss_pred HHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCCh---
Q 021023 103 ICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQ--- 179 (318)
Q Consensus 103 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 179 (318)
+ +.++++++||||||.+++.+|.++|++|+++|++++.+..... . ........+..... .......
T Consensus 78 l------~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~-~~~~~~~~~~~~~~-~~~~~~~~~~ 146 (255)
T PRK10673 78 L------QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---R-RHDEIFAAINAVSE-AGATTRQQAA 146 (255)
T ss_pred c------CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---h-hhHHHHHHHHHhhh-cccccHHHHH
Confidence 8 7788999999999999999999999999999999754322110 0 00011111100000 0000000
Q ss_pred hhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCC
Q 021023 180 DIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSD 259 (318)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 259 (318)
...................................+.. ......++++++|+|+|+|++|..++.+..+.+.+.+ ++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~ 223 (255)
T PRK10673 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQ 223 (255)
T ss_pred HHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CC
Confidence 00000111111111111000000000001101111110 1112345678999999999999999999998888888 78
Q ss_pred ceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 260 KTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 260 ~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
+++.+++++||++..++|+ ++.+.+.+||.+
T Consensus 224 ~~~~~~~~~gH~~~~~~p~----~~~~~l~~fl~~ 254 (255)
T PRK10673 224 ARAHVIAGAGHWVHAEKPD----AVLRAIRRYLND 254 (255)
T ss_pred cEEEEeCCCCCeeeccCHH----HHHHHHHHHHhc
Confidence 8999999999999997765 499999999874
No 18
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.4e-33 Score=220.03 Aligned_cols=261 Identities=14% Similarity=0.209 Sum_probs=163.1
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCC
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY 85 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 85 (318)
+..+++.... ...+|.+++|...+ .+++|||+||++.+...| ..+.+.|.+ +|+|+++|+||||.|+.+...
T Consensus 9 ~~~~~~~~~~-~~~~~~~i~y~~~G-----~~~~iv~lHG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~ 80 (286)
T PRK03204 9 PQLYPFESRW-FDSSRGRIHYIDEG-----TGPPILLCHGNPTWSFLY-RDIIVALRD-RFRCVAPDYLGFGLSERPSGF 80 (286)
T ss_pred CccccccceE-EEcCCcEEEEEECC-----CCCEEEEECCCCccHHHH-HHHHHHHhC-CcEEEEECCCCCCCCCCCCcc
Confidence 3345555544 45578899988764 246799999999887777 889999965 599999999999999866544
Q ss_pred CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
.++.+++++++.++++.+ +.++++++||||||.+++.++..+|++|+++|++++....... .. ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~----~~-~~~~~~ 149 (286)
T PRK03204 81 GYQIDEHARVIGEFVDHL------GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT----LA-MKAFSR 149 (286)
T ss_pred ccCHHHHHHHHHHHHHHh------CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc----hh-HHHHHH
Confidence 468899999999999988 7889999999999999999999999999999998875421100 00 000000
Q ss_pred hhhcCCC-cccCCChhhhhhhhcC----hhhhHhhhhCCCCcCCccchhhHHH----Hhhhc----hhHHhhcCc--ccc
Q 021023 166 LCKFIPT-WKIIPSQDIVDVAFKL----PEKRKEIRANPYCYKGRPRLKTGYE----LMRVS----MDLENRLDE--VSI 230 (318)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~--i~~ 230 (318)
.....+. ........+....+.. ........... ............. .+... ......+.+ +++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T PRK03204 150 VMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYR-AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTK 228 (286)
T ss_pred HhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCC
Confidence 0000000 0000000000000000 00000000000 0000000000000 00000 111111111 279
Q ss_pred cEEEEEeCCCcccChH-HHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 231 PFIVLHGEEDKVTDKA-VSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 231 P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
|+++|+|++|.++++. ..+.+.+.+ ++.++++++++||++++|+|++ +.+.|.+||
T Consensus 229 PtliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 229 PTLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDR----IAAAIIERF 285 (286)
T ss_pred CeEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHH----HHHHHHHhc
Confidence 9999999999988655 567777777 7899999999999999988765 888998886
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=3.6e-33 Score=216.34 Aligned_cols=252 Identities=15% Similarity=0.185 Sum_probs=165.1
Q ss_pred EEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 24 LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 24 l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
++|..+++.. ..+|+|||+||++++...| ..+++.|.+ +|+|+++|+||||.|.......++++++++++.++++.+
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYW-APQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHH-HHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4677777653 4578899999999998877 888888854 699999999999999876555579999999999999988
Q ss_pred HhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhh--
Q 021023 104 CEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDI-- 181 (318)
Q Consensus 104 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 181 (318)
+.++++++||||||.+++.++.++|++|+++|++++......... .........+..............+
T Consensus 78 ------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 78 ------NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR--RCFDVRIALLQHAGPEAYVHAQALFLY 149 (257)
T ss_pred ------CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH--HHHHHHHHHHhccCcchhhhhhhhhhc
Confidence 778999999999999999999999999999999998654321100 0000000000000000000000000
Q ss_pred hhhhhcC--hhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCC
Q 021023 182 VDVAFKL--PEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSD 259 (318)
Q Consensus 182 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 259 (318)
...+... .............+............. ...+....+.++++|+++++|++|.++|++.++.+.+.+ ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~ 226 (257)
T TIGR03611 150 PADWISENAARLAADEAHALAHFPGKANVLRRINAL-EAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL--PN 226 (257)
T ss_pred cccHhhccchhhhhhhhhcccccCccHHHHHHHHHH-HcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc--CC
Confidence 0000000 000000000000000000011111111 112334567788999999999999999999999988887 67
Q ss_pred ceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 260 KTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 260 ~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
++++.++++||.+.+++|+ ++.+.+.+||+
T Consensus 227 ~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~ 256 (257)
T TIGR03611 227 AQLKLLPYGGHASNVTDPE----TFNRALLDFLK 256 (257)
T ss_pred ceEEEECCCCCCccccCHH----HHHHHHHHHhc
Confidence 8999999999999997664 48889999985
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=6e-33 Score=217.72 Aligned_cols=249 Identities=16% Similarity=0.134 Sum_probs=156.4
Q ss_pred CeeEEEEeecCCCCCCceEEEEEccCCcccccchhH---HHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHH
Q 021023 21 RVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS---TAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF 97 (318)
Q Consensus 21 g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 97 (318)
|.+++|...+ ..|+|||+||++++...| .. .+..|.+.||+|+++|+||||.|+............++|+.
T Consensus 19 ~~~~~y~~~g-----~~~~ivllHG~~~~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~ 92 (282)
T TIGR03343 19 NFRIHYNEAG-----NGEAVIMLHGGGPGAGGW-SNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVK 92 (282)
T ss_pred ceeEEEEecC-----CCCeEEEECCCCCchhhH-HHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHH
Confidence 4567777653 346799999999887766 43 34566677899999999999999865322112224688999
Q ss_pred HHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCc--hhHHHHHhhhhhcCCCccc
Q 021023 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPH--PLVISVLTKLCKFIPTWKI 175 (318)
Q Consensus 98 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 175 (318)
++++.+ +.++++++||||||.+++.+|.++|++|+++|++++........... .........+.. +. .
T Consensus 93 ~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~ 162 (282)
T TIGR03343 93 GLMDAL------DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAE--PS--Y 162 (282)
T ss_pred HHHHHc------CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcC--CC--H
Confidence 999988 88999999999999999999999999999999999764211100000 011111110000 00 0
Q ss_pred CCChhhhhhhhc-----ChhhhHhhhhCCCCcCCccchhhHHHH----hhhchhHHhhcCcccccEEEEEeCCCcccChH
Q 021023 176 IPSQDIVDVAFK-----LPEKRKEIRANPYCYKGRPRLKTGYEL----MRVSMDLENRLDEVSIPFIVLHGEEDKVTDKA 246 (318)
Q Consensus 176 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~ 246 (318)
............ ............... .......... .....+....++++++|+++++|++|.+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~ 240 (282)
T TIGR03343 163 ETLKQMLNVFLFDQSLITEELLQGRWENIQRQ--PEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLD 240 (282)
T ss_pred HHHHHHHhhCccCcccCcHHHHHhHHHHhhcC--HHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCch
Confidence 000000000000 000000000000000 0000000000 00112334567889999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 247 VSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
.++++.+.+ +++++++++++||+++.|+|+. +.+.|.+|+.
T Consensus 241 ~~~~~~~~~--~~~~~~~i~~agH~~~~e~p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 241 HGLKLLWNM--PDAQLHVFSRCGHWAQWEHADA----FNRLVIDFLR 281 (282)
T ss_pred hHHHHHHhC--CCCEEEEeCCCCcCCcccCHHH----HHHHHHHHhh
Confidence 999988888 7899999999999999977754 8899999985
No 21
>COG1647 Esterase/lipase [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=192.45 Aligned_cols=228 Identities=19% Similarity=0.272 Sum_probs=171.4
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
+..|+|+||+.|+.... +.++++|.++||.|.+|.+||||......-. .++++|.+|+.+..++|.+. +.+.|.+
T Consensus 15 ~~AVLllHGFTGt~~Dv-r~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~---gy~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPRDV-RMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEA---GYDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcHHH-HHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHc---CCCeEEE
Confidence 47899999999999977 9999999999999999999999988744333 58999999999999999643 7889999
Q ss_pred EEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhh
Q 021023 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR 196 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (318)
+|.||||.+++.+|..+| ++++|.+|++.....+. ..+..++...... ...... ........+.
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~---~iie~~l~y~~~~-kk~e~k----------~~e~~~~e~~ 153 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR---IIIEGLLEYFRNA-KKYEGK----------DQEQIDKEMK 153 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccch---hhhHHHHHHHHHh-hhccCC----------CHHHHHHHHH
Confidence 999999999999999999 89999999988754322 2222222221110 000000 0011111111
Q ss_pred hCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccC
Q 021023 197 ANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGE 276 (318)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 276 (318)
... ........++.....+....+..|..|+++++|.+|+++|.+.+..+++.+.+.+.++.+++++||....
T Consensus 154 ~~~-----~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~-- 226 (243)
T COG1647 154 SYK-----DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL-- 226 (243)
T ss_pred Hhh-----cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeec--
Confidence 110 1122233334444456777888999999999999999999999999999998888999999999999998
Q ss_pred CccchHHHHHHHHHHHH
Q 021023 277 PEENTQIVFRDILNWLD 293 (318)
Q Consensus 277 p~~~~~~~~~~i~~fl~ 293 (318)
+...+++.+.+..||+
T Consensus 227 -D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 227 -DKERDQVEEDVITFLE 242 (243)
T ss_pred -chhHHHHHHHHHHHhh
Confidence 4567889999999996
No 22
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=219.65 Aligned_cols=261 Identities=16% Similarity=0.173 Sum_probs=161.8
Q ss_pred cCCeeEEEEeecCCC----CCCceEEEEEccCCcccccch-hHHHHHH-------HhcCcEEEEecCCCCcCCCCCCCC-
Q 021023 19 SRRVKLFTCSWIPQN----QEPKALIFICHGYAMECSIGM-NSTAIRL-------ANEGYACYGIDYQGHGKSAGLSGY- 85 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~----~~~~~~iv~~hG~~~~~~~~~-~~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~- 85 (318)
.+|.+++|..+++.. .+.+|+|||+||++++...|+ ..+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 568899999886531 011578999999999887773 2555544 135799999999999999754321
Q ss_pred -----CCChHhHHHHHHHHH-HHHHhhhhccCceEE-EEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchh
Q 021023 86 -----IDNFDDLVDDCFNHF-TSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPL 158 (318)
Q Consensus 86 -----~~~~~~~~~d~~~~l-~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 158 (318)
.++++++++++.+++ +.+ +.++++ ++||||||++|+.+|.++|++|+++|++++....... ....
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~l------gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~--~~~~ 198 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGL------GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG--RNWM 198 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhc------CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH--HHHH
Confidence 368889998888855 667 778875 8999999999999999999999999999875422110 0110
Q ss_pred HHHH-HhhhhhcCCCc---ccCCCh-hhhh---h---h-----------hcChhh-hHhhhhCCCCcCCccchhhHHHHh
Q 021023 159 VISV-LTKLCKFIPTW---KIIPSQ-DIVD---V---A-----------FKLPEK-RKEIRANPYCYKGRPRLKTGYELM 215 (318)
Q Consensus 159 ~~~~-~~~~~~~~~~~---~~~~~~-~~~~---~---~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
.... ...+... ..+ ...... .... . . ...... ............ ...........
T Consensus 199 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 276 (360)
T PRK06489 199 WRRMLIESIRND-PAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV-TADANDFLYQW 276 (360)
T ss_pred HHHHHHHHHHhC-CCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh-hcCHHHHHHHH
Confidence 1111 1111100 000 000000 0000 0 0 000000 000000000000 00001111111
Q ss_pred h--hchhHHhhcCcccccEEEEEeCCCcccChHHH--HHHHHHhcCCCceEEEecCC----cccccccCCccchHHHHHH
Q 021023 216 R--VSMDLENRLDEVSIPFIVLHGEEDKVTDKAVS--VQLFKVASSSDKTMKLYEGM----WHGLLYGEPEENTQIVFRD 287 (318)
Q Consensus 216 ~--~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~p~~~~~~~~~~ 287 (318)
. ...+..+.+.+|++|+|+|+|++|.++|++.+ +.+.+.+ +++++++++++ ||.++ ++|+. +++.
T Consensus 277 ~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e~P~~----~~~~ 349 (360)
T PRK06489 277 DSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT-GSAKF----WKAY 349 (360)
T ss_pred HHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc-cCHHH----HHHH
Confidence 1 12244567889999999999999999998865 6778888 78899999996 99986 67754 9999
Q ss_pred HHHHHHHHh
Q 021023 288 ILNWLDERV 296 (318)
Q Consensus 288 i~~fl~~~~ 296 (318)
|.+||++..
T Consensus 350 i~~FL~~~~ 358 (360)
T PRK06489 350 LAEFLAQVP 358 (360)
T ss_pred HHHHHHhcc
Confidence 999997653
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.9e-32 Score=214.77 Aligned_cols=258 Identities=17% Similarity=0.139 Sum_probs=169.2
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHH
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD 94 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 94 (318)
.+.+.+|.+++|...++. ..|+|||+||++++...| ..+.+.|++ +|+|+++|+||||.|..+....++++.+++
T Consensus 9 ~~~~~~~~~~~~~~~g~~---~~~~vv~~hG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPT---AGPLLLLLHGTGASTHSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred ceeeECCEEEEEEecCCC---CCCeEEEEcCCCCCHHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 445668999999887653 347899999999999888 899999965 599999999999999866554479999999
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCC--chhHHHHHhhhhhcCCC
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKP--HPLVISVLTKLCKFIPT 172 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 172 (318)
|+.++++.+ +.++++++||||||.+++.+|.++|++++++|++++.......... ........... .....
T Consensus 84 ~l~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 156 (278)
T TIGR03056 84 DLSALCAAE------GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACN-PFTPP 156 (278)
T ss_pred HHHHHHHHc------CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhc-ccchH
Confidence 999999887 6788999999999999999999999999999999886543211100 00000000000 00000
Q ss_pred cc--cCCChhhhhhhhcC------hhhhHhhhhCCCCcCCccchhhHHHHhhh--chhHHhhcCcccccEEEEEeCCCcc
Q 021023 173 WK--IIPSQDIVDVAFKL------PEKRKEIRANPYCYKGRPRLKTGYELMRV--SMDLENRLDEVSIPFIVLHGEEDKV 242 (318)
Q Consensus 173 ~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~lii~G~~D~~ 242 (318)
.. .............. .......... ................ .......++++++|+++++|++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRL---IRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred HHHhhcccCcchhHHhhccccccccchhhHHHHh---hcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 00 00000000000000 0000000000 0000000000010000 0112345678899999999999999
Q ss_pred cChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 243 TDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
+|++..+.+.+.+ ++++++.++++||+++.|.|+ ++.+.|.+|++
T Consensus 234 vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRV--PTATLHVVPGGGHLVHEEQAD----GVVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHH----HHHHHHHHHhC
Confidence 9999998888887 778999999999999997665 48999999873
No 24
>PLN02578 hydrolase
Probab=100.00 E-value=3.8e-32 Score=218.17 Aligned_cols=255 Identities=18% Similarity=0.231 Sum_probs=167.1
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHH
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD 94 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 94 (318)
.+.+.+|.+++|...+ .+++|||+||++++...| ..+++.|++ +|+|+++|+||||.|+.+... ++.+.+++
T Consensus 69 ~~~~~~~~~i~Y~~~g-----~g~~vvliHG~~~~~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~a~ 140 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG-----EGLPIVLIHGFGASAFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIE-YDAMVWRD 140 (354)
T ss_pred eEEEECCEEEEEEEcC-----CCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccc-cCHHHHHH
Confidence 4445578889988754 235699999999998877 888899965 599999999999999876543 68899999
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCc--------hhHHH-HHhh
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPH--------PLVIS-VLTK 165 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--------~~~~~-~~~~ 165 (318)
++.++++.+ ..++++++|||+||.+++.+|.++|++|+++|++++........... ..... ....
T Consensus 141 ~l~~~i~~~------~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 141 QVADFVKEV------VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHh------ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 999999988 67899999999999999999999999999999998765432111000 00000 0000
Q ss_pred ----hhhcCCC---cccCCCh---hhhhhhhcCh-----hhhHhhhhCCCCcCCccchhhHHHHhh------hchhHHhh
Q 021023 166 ----LCKFIPT---WKIIPSQ---DIVDVAFKLP-----EKRKEIRANPYCYKGRPRLKTGYELMR------VSMDLENR 224 (318)
Q Consensus 166 ----~~~~~~~---~~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 224 (318)
+...... +...... ......+.+. ......... .. ............. ...+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEP-AA--DPNAGEVYYRLMSRFLFNQSRYTLDSL 291 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhc-cc--CCchHHHHHHHHHHHhcCCCCCCHHHH
Confidence 0000000 0000000 0000001000 000000000 00 0000011111110 11234456
Q ss_pred cCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 225 LDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 225 ~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
+.++++|+++|+|++|.++|.+.++.+.+.+ ++.+++++ ++||+++.|+|++ +.+.|.+|++
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~----~~~~I~~fl~ 353 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQ----VNKALLEWLS 353 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHH----HHHHHHHHHh
Confidence 7889999999999999999999999888888 77889988 5999999987765 9999999985
No 25
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=6.6e-32 Score=215.51 Aligned_cols=268 Identities=15% Similarity=0.136 Sum_probs=172.2
Q ss_pred cCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC--
Q 021023 7 HNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-- 84 (318)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 84 (318)
.++++........+|.+++|...++. .+++|||+||++++...| ..+++.|++ +|+|+++|+||||.|+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~ 174 (383)
T PLN03084 100 FGLKMGAQSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY 174 (383)
T ss_pred ccccccceeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccc
Confidence 44555556666789999999987654 357899999999999888 899999965 69999999999999986643
Q ss_pred -CCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHH
Q 021023 85 -YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVL 163 (318)
Q Consensus 85 -~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 163 (318)
..++++++++++.++++.+ +.++++|+|||+||.+++.+|.++|++|+++|++++.........+ .....+.
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l------~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p-~~l~~~~ 247 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDEL------KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLP-STLSEFS 247 (383)
T ss_pred cccCCHHHHHHHHHHHHHHh------CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccch-HHHHHHH
Confidence 2479999999999999999 7889999999999999999999999999999999987542110001 1111110
Q ss_pred hhh-hhcCCCcccCCChhhhhhhhc--ChhhhHhhhhCCCCcCCcc--chhhHHHHhhh-c----hhHHhhc--Cccccc
Q 021023 164 TKL-CKFIPTWKIIPSQDIVDVAFK--LPEKRKEIRANPYCYKGRP--RLKTGYELMRV-S----MDLENRL--DEVSIP 231 (318)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~----~~~~~~~--~~i~~P 231 (318)
..+ ..................... ...........+....... ........... . .+....+ .++++|
T Consensus 248 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vP 327 (383)
T PLN03084 248 NFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTP 327 (383)
T ss_pred HHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCC
Confidence 000 000000000000000000000 0000000000111000000 00000111100 0 0111111 357999
Q ss_pred EEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 232 FIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 232 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
+++++|+.|.+++.+.++.+.+. .+.++.+++++||+++.|+|++ +++.|.+|+.
T Consensus 328 vLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~E~Pe~----v~~~I~~Fl~ 382 (383)
T PLN03084 328 ITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQEDCGEE----LGGIISGILS 382 (383)
T ss_pred EEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcchhCHHH----HHHHHHHHhh
Confidence 99999999999999988877765 3679999999999999977754 9999999985
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.2e-32 Score=212.63 Aligned_cols=245 Identities=16% Similarity=0.228 Sum_probs=152.4
Q ss_pred EEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 24 LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 24 l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
++|..++ +..|+|||+||++++...| ..+.+.|.+. |+|+++|+||||.|.... .++++++++++.+ +
T Consensus 4 ~~y~~~G----~g~~~ivllHG~~~~~~~w-~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~ 71 (256)
T PRK10349 4 IWWQTKG----QGNVHLVLLHGWGLNAEVW-RCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q 71 (256)
T ss_pred cchhhcC----CCCCeEEEECCCCCChhHH-HHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c
Confidence 4555553 2235699999999999988 8999999765 999999999999998543 2477666665542 3
Q ss_pred HhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhh
Q 021023 104 CEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVD 183 (318)
Q Consensus 104 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (318)
..++++++||||||.+++.+|.++|++|+++|++++....................+..............+..
T Consensus 72 ------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 72 ------APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred ------CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 46789999999999999999999999999999998864432111100000000100000000000000000000
Q ss_pred hh-hcChhhhH---hhhhCCC--CcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC
Q 021023 184 VA-FKLPEKRK---EIRANPY--CYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS 257 (318)
Q Consensus 184 ~~-~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 257 (318)
.. ........ ....... ............... ...+....+.++++|+++++|++|.++|.+.++.+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i-- 222 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEIL-KTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-- 222 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHH-HhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC--
Confidence 00 00000000 0000000 000000111111111 123455677889999999999999999999888888888
Q ss_pred CCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 258 SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 258 ~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
+++++++++++||++++|+|+. +.+.+.+|-+
T Consensus 223 ~~~~~~~i~~~gH~~~~e~p~~----f~~~l~~~~~ 254 (256)
T PRK10349 223 PHSESYIFAKAAHAPFISHPAE----FCHLLVALKQ 254 (256)
T ss_pred CCCeEEEeCCCCCCccccCHHH----HHHHHHHHhc
Confidence 7899999999999999977764 8888887743
No 27
>PRK13604 luxD acyl transferase; Provisional
Probab=100.00 E-value=2.7e-31 Score=201.12 Aligned_cols=237 Identities=13% Similarity=0.119 Sum_probs=161.4
Q ss_pred CccceEEEeecCCeeEEEEeecCCC--CCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC-cCCCCCCCC
Q 021023 9 IKYDEEFILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH-GKSAGLSGY 85 (318)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~ 85 (318)
....++.+...||.+|.++...|.+ ..+.++||++||++++...+ ..+++.|+++||.|+.+|+||+ |.|++....
T Consensus 7 ~~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~-~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 7 FKTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHF-AGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred ccchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHH-HHHHHHHHHCCCEEEEecCCCCCCCCCCcccc
Confidence 3455677888899999999998863 35678999999999987645 9999999999999999999987 999875543
Q ss_pred CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
.+......|+.+++++++++ +..+++|+||||||.+|+..|... .++++|+.+|+....+... .....
T Consensus 86 -~t~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~------~~~~~ 153 (307)
T PRK13604 86 -FTMSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLE------RALGY 153 (307)
T ss_pred -CcccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHH------Hhhhc
Confidence 34445589999999999654 457899999999999997777643 3999999999987632111 10000
Q ss_pred hhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHH-hhhchhHHhhcCcccccEEEEEeCCCcccC
Q 021023 166 LCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYEL-MRVSMDLENRLDEVSIPFIVLHGEEDKVTD 244 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 244 (318)
....++.........+....+. ..... ...... ........+.+.+++.|+|+|||+.|.+||
T Consensus 154 ~~~~~p~~~lp~~~d~~g~~l~---~~~f~-------------~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp 217 (307)
T PRK13604 154 DYLSLPIDELPEDLDFEGHNLG---SEVFV-------------TDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVK 217 (307)
T ss_pred ccccCccccccccccccccccc---HHHHH-------------HHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccC
Confidence 0000000000000000000000 00000 000000 000112234566778999999999999999
Q ss_pred hHHHHHHHHHhcCCCceEEEecCCcccccc
Q 021023 245 KAVSVQLFKVASSSDKTMKLYEGMWHGLLY 274 (318)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 274 (318)
.+.++++++.+.+.++++++++|++|.+..
T Consensus 218 ~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 218 QSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 999999999986668999999999998876
No 28
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=6.3e-31 Score=210.81 Aligned_cols=263 Identities=14% Similarity=0.064 Sum_probs=160.3
Q ss_pred cCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHH---HHHHhcCcEEEEecCCCCcCCCCCCC--CCCChHh--
Q 021023 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTA---IRLANEGYACYGIDYQGHGKSAGLSG--YIDNFDD-- 91 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~-- 91 (318)
.+|.+++|..+++......|+||++||++++...| ..++ +.|...+|+|+++|+||||.|..+.. ..+++++
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDN-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccc-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 46788999999864323446777778877776655 4443 36655679999999999999975432 1234433
Q ss_pred ---HHHHHHH----HHHHHHhhhhccCce-EEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHH
Q 021023 92 ---LVDDCFN----HFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVL 163 (318)
Q Consensus 92 ---~~~d~~~----~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 163 (318)
+++|+.+ +++.+ +.++ ++|+||||||++|+.+|.++|++|+++|++++....... .........
T Consensus 102 ~~~~~~~~~~~~~~l~~~l------gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~--~~~~~~~~~ 173 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF------GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH--NFVFLEGLK 173 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh------CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH--HHHHHHHHH
Confidence 4566665 55666 7889 479999999999999999999999999999876542110 000000010
Q ss_pred hhhhhcCCCcc----c-CCCh---h----hh-----hhhhcC-----------hhhhHhhhhCCCCcCCccchhhHHHHh
Q 021023 164 TKLCKFIPTWK----I-IPSQ---D----IV-----DVAFKL-----------PEKRKEIRANPYCYKGRPRLKTGYELM 215 (318)
Q Consensus 164 ~~~~~~~~~~~----~-~~~~---~----~~-----~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
..+.. .+.+. . .+.. . .. ...+.. ...........................
T Consensus 174 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (339)
T PRK07581 174 AALTA-DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTW 252 (339)
T ss_pred HHHHh-CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHh
Confidence 00000 00000 0 0000 0 00 000000 000000000000000001111111000
Q ss_pred h------h---chhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecC-CcccccccCCccchHHHH
Q 021023 216 R------V---SMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEG-MWHGLLYGEPEENTQIVF 285 (318)
Q Consensus 216 ~------~---~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~~~ 285 (318)
. . ..+....+.++++|+|+|+|++|.++|++.++.+.+.+ ++++++++++ +||..+.++|+. +.
T Consensus 253 ~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~----~~ 326 (339)
T PRK07581 253 QRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPA----DI 326 (339)
T ss_pred hhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHH----HH
Confidence 0 0 12455678889999999999999999999999888888 7889999998 999999988765 88
Q ss_pred HHHHHHHHHHhc
Q 021023 286 RDILNWLDERVA 297 (318)
Q Consensus 286 ~~i~~fl~~~~~ 297 (318)
..|.+|+.+.+.
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 888888887653
No 29
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=5.7e-31 Score=207.48 Aligned_cols=261 Identities=16% Similarity=0.178 Sum_probs=161.4
Q ss_pred EeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCC--CCChHhHH
Q 021023 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY--IDNFDDLV 93 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~ 93 (318)
+.+.+|..+.|...++. ..+++|||+||++++...|+..+...+.+.||+|+++|+||+|.|..+... .+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred eecCCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 34567778888777644 345789999998776655656776677655999999999999999865433 26899999
Q ss_pred HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHH-----HHhhhhh
Q 021023 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVIS-----VLTKLCK 168 (318)
Q Consensus 94 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 168 (318)
+|+.++++.+ +.++++++||||||.+++.++.++|++++++|++++................ ....+..
T Consensus 84 ~~~~~~~~~~------~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (288)
T TIGR01250 84 DELEEVREKL------GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKR 157 (288)
T ss_pred HHHHHHHHHc------CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHH
Confidence 9999999888 7788999999999999999999999999999999876533111000000000 0000000
Q ss_pred cCCCcccCCC--hhhhhhhh-----cChhhhHhhhhCCCCc--------CCccchhhHHHHhhhchhHHhhcCcccccEE
Q 021023 169 FIPTWKIIPS--QDIVDVAF-----KLPEKRKEIRANPYCY--------KGRPRLKTGYELMRVSMDLENRLDEVSIPFI 233 (318)
Q Consensus 169 ~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 233 (318)
.......... ........ ................ .....+... . .....+....+.++++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~i~~P~l 235 (288)
T TIGR01250 158 CEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTIT-G-NLKDWDITDKLSEIKVPTL 235 (288)
T ss_pred HHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccccc-c-cccccCHHHHhhccCCCEE
Confidence 0000000000 00000000 0000000000000000 000000000 0 0011233456678899999
Q ss_pred EEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 234 VLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 234 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
+++|++|.+ +++..+.+.+.+ +++++++++++||+.+.++|+ ++.+.|.+|++
T Consensus 236 ii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~ 288 (288)
T TIGR01250 236 LTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPE----VYFKLLSDFIR 288 (288)
T ss_pred EEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHH----HHHHHHHHHhC
Confidence 999999985 667777887777 678999999999999997765 48888888873
No 30
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=5.4e-32 Score=208.98 Aligned_cols=240 Identities=16% Similarity=0.200 Sum_probs=159.3
Q ss_pred EEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 24 LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 24 l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
++|..+++. +.+|+|||+||++.+...| ..+++.|. .||+|+++|+||+|.|..... .++++++++|+.++++.+
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHL 76 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh
Confidence 566666543 3568999999999998877 88988885 579999999999999975543 368999999999999988
Q ss_pred HhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHH--------HHh-hhhhcCCCcc
Q 021023 104 CEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVIS--------VLT-KLCKFIPTWK 174 (318)
Q Consensus 104 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~ 174 (318)
+.++++++|||+||.+++.+|.++|++|+++|++++................ ... .+........
T Consensus 77 ------~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR02427 77 ------GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGF 150 (251)
T ss_pred ------CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccccc
Confidence 6789999999999999999999999999999999876543211000000000 000 0000000000
Q ss_pred cCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHH
Q 021023 175 IIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKV 254 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 254 (318)
.. ........+...... ............. ...+....+.++++|+++++|++|.++|.+..+.+.+.
T Consensus 151 ~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~ 218 (251)
T TIGR02427 151 RE----------AHPARLDLYRNMLVR-QPPDGYAGCCAAI-RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADL 218 (251)
T ss_pred cc----------CChHHHHHHHHHHHh-cCHHHHHHHHHHH-hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHh
Confidence 00 000000000000000 0000000000111 11233455678899999999999999999988888888
Q ss_pred hcCCCceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 255 ASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 255 ~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
+ ++.++++++++||..+.++|+ ++.+.+.+|+
T Consensus 219 ~--~~~~~~~~~~~gH~~~~~~p~----~~~~~i~~fl 250 (251)
T TIGR02427 219 V--PGARFAEIRGAGHIPCVEQPE----AFNAALRDFL 250 (251)
T ss_pred C--CCceEEEECCCCCcccccChH----HHHHHHHHHh
Confidence 7 678999999999999997765 4888888886
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.98 E-value=7e-31 Score=201.37 Aligned_cols=228 Identities=18% Similarity=0.184 Sum_probs=145.1
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
+|+|||+||++++...| ..+++.| + +|+|+++|+||||.|..+.. .+++++++|+.++++.+ +.+++++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~------~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSY------NILPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHc------CCCCeEE
Confidence 46799999999999988 9999988 4 59999999999999986543 38999999999999988 7899999
Q ss_pred EEEchhHHHHHHHHhhCCCC-cCEEEEeCCCcccccccCCchhHHHHHh--hhhhcCCCcccCCChhhhhhhhc------
Q 021023 117 LGESMGGAMVLLLHRKKPDY-FDGAVLVAPMCKIAENVKPHPLVISVLT--KLCKFIPTWKIIPSQDIVDVAFK------ 187 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------ 187 (318)
+||||||.+++.+|.++|+. |++++++++....... ......... .+...... .........++.
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNA---EERQARWQNDRQWAQRFRQ---EPLEQVLADWYQQPVFAS 144 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCH---HHHHHHHhhhHHHHHHhcc---CcHHHHHHHHHhcchhhc
Confidence 99999999999999998764 9999999876533211 000000000 00000000 000001000000
Q ss_pred -ChhhhHhhhhCCCCcCCccchhhHHHHh--hhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEE
Q 021023 188 -LPEKRKEIRANPYCYKGRPRLKTGYELM--RVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKL 264 (318)
Q Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
............... ............ ....+..+.+.++++|+++++|++|..+. .+.+. .++++++
T Consensus 145 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~ 215 (242)
T PRK11126 145 LNAEQRQQLVAKRSNN-NGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHV 215 (242)
T ss_pred cCccHHHHHHHhcccC-CHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEE
Confidence 000000000000000 000000000000 11123456678899999999999998552 22222 3689999
Q ss_pred ecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 265 YEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 265 ~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
++++||+++.|+|++ +.+.|.+|+.+
T Consensus 216 i~~~gH~~~~e~p~~----~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHRENPAA----FAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhhChHH----HHHHHHHHHhh
Confidence 999999999987764 88889999864
No 32
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=3e-31 Score=213.07 Aligned_cols=261 Identities=14% Similarity=0.124 Sum_probs=162.3
Q ss_pred cCCeeEEEEeecCCCCCCceEEEEEccCCccccc----------chhHHH---HHHHhcCcEEEEecCCC--CcCCCCC-
Q 021023 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI----------GMNSTA---IRLANEGYACYGIDYQG--HGKSAGL- 82 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~~- 82 (318)
.+|.+|+|..+++.+...+++||++||++++... ||..++ ..|...+|+|+++|+|| ||.|...
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 4678999999987533446789999999997632 336665 35556789999999999 5555421
Q ss_pred ---C-------CCCCChHhHHHHHHHHHHHHHhhhhccCce-EEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccccc
Q 021023 83 ---S-------GYIDNFDDLVDDCFNHFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 83 ---~-------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (318)
. ...++++++++|+.++++.+ +.++ ++++||||||++++.+|.++|++|+++|++++......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHL------GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSA 166 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCH
Confidence 1 11368999999999999998 7888 99999999999999999999999999999998765422
Q ss_pred ccCCchhHHHHHhhhhhc--CCCcccC----CChhh--h----hhhhcChh-hhHhhhhCCCCc----------------
Q 021023 152 NVKPHPLVISVLTKLCKF--IPTWKII----PSQDI--V----DVAFKLPE-KRKEIRANPYCY---------------- 202 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~--~----~~~~~~~~-~~~~~~~~~~~~---------------- 202 (318)
... .........+... ....... +.... . ........ ....+.......
T Consensus 167 ~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
T TIGR01392 167 WCI--AFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESY 244 (351)
T ss_pred HHH--HHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHH
Confidence 100 0000000111000 0000000 00000 0 00000000 000000000000
Q ss_pred -----------CCccchhhHHHHhhhc------hhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEE--
Q 021023 203 -----------KGRPRLKTGYELMRVS------MDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMK-- 263 (318)
Q Consensus 203 -----------~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~-- 263 (318)
............+... .+..+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++.++.
T Consensus 245 ~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~v~ 322 (351)
T TIGR01392 245 LRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLRVT 322 (351)
T ss_pred HHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCceE
Confidence 0000000000111110 1235678899999999999999999999999999998 555544
Q ss_pred ---EecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 264 ---LYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 264 ---~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
+++++||.+++++|+ ++.+.|.+||+
T Consensus 323 ~~~i~~~~GH~~~le~p~----~~~~~l~~FL~ 351 (351)
T TIGR01392 323 YVEIESPYGHDAFLVETD----QVEELIRGFLR 351 (351)
T ss_pred EEEeCCCCCcchhhcCHH----HHHHHHHHHhC
Confidence 557899999997775 48999999973
No 33
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=4.7e-31 Score=211.30 Aligned_cols=257 Identities=13% Similarity=0.117 Sum_probs=157.3
Q ss_pred ecCCeeEEEEeecCCCCCCceEEEEEccCCccccc-----------chhHHHH---HHHhcCcEEEEecCCCCcCCCCCC
Q 021023 18 NSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI-----------GMNSTAI---RLANEGYACYGIDYQGHGKSAGLS 83 (318)
Q Consensus 18 ~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~ 83 (318)
..+|.+++|..+++. ..| +||+||+.++... ||..++. .|...+|+|+++|+||||.|...
T Consensus 42 ~~~~~~l~y~~~G~~---~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~- 116 (343)
T PRK08775 42 GLEDLRLRYELIGPA---GAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV- 116 (343)
T ss_pred CCCCceEEEEEeccC---CCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC-
Confidence 347889999988653 123 6777666666552 3477775 56444699999999999988532
Q ss_pred CCCCChHhHHHHHHHHHHHHHhhhhccCce-EEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHH
Q 021023 84 GYIDNFDDLVDDCFNHFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISV 162 (318)
Q Consensus 84 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (318)
.++.+++++|+.++++.+ +.++ ++++||||||++|+.+|.++|++|+++|++++....... .......
T Consensus 117 --~~~~~~~a~dl~~ll~~l------~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~---~~~~~~~ 185 (343)
T PRK08775 117 --PIDTADQADAIALLLDAL------GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY---AAAWRAL 185 (343)
T ss_pred --CCCHHHHHHHHHHHHHHc------CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH---HHHHHHH
Confidence 257889999999999998 7766 479999999999999999999999999999987543110 0001111
Q ss_pred HhhhhhcCCCcccC-CChhhhh----hhhcChh-hhHhhhhCCCCcC-----C--------------ccchhhHHHHhhh
Q 021023 163 LTKLCKFIPTWKII-PSQDIVD----VAFKLPE-KRKEIRANPYCYK-----G--------------RPRLKTGYELMRV 217 (318)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~-~~~~~~~~~~~~~-----~--------------~~~~~~~~~~~~~ 217 (318)
.............. ....... ....... ....+........ . .............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T PRK08775 186 QRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSES 265 (343)
T ss_pred HHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHH
Confidence 01100000000000 0000000 0000000 0000000000000 0 0000000000000
Q ss_pred chhH-HhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecC-CcccccccCCccchHHHHHHHHHHHHHH
Q 021023 218 SMDL-ENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEG-MWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 218 ~~~~-~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.+. ...+.++++|+|+++|++|.++|++..+.+.+.+. ++++++++++ +||.+++|+|++ +++.+.+||.+.
T Consensus 266 -~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~----~~~~l~~FL~~~ 339 (343)
T PRK08775 266 -IDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDR----IDAILTTALRST 339 (343)
T ss_pred -HhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHH----HHHHHHHHHHhc
Confidence 011 12367899999999999999999998888888773 4789999985 999999987764 999999999764
Q ss_pred h
Q 021023 296 V 296 (318)
Q Consensus 296 ~ 296 (318)
-
T Consensus 340 ~ 340 (343)
T PRK08775 340 G 340 (343)
T ss_pred c
Confidence 3
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=3.3e-31 Score=201.49 Aligned_cols=217 Identities=24% Similarity=0.361 Sum_probs=150.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-CCCChHhHHHHHHHHHHHHHhhhhccCceEEEEE
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 118 (318)
|||+||++++...| ..+++.|+ +||+|+++|+||+|.|..... ..++++++++|+.++++.+ +.++++++|
T Consensus 1 vv~~hG~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL------GIKKVILVG 72 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT------TTSSEEEEE
T ss_pred eEEECCCCCCHHHH-HHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc------ccccccccc
Confidence 79999999999877 99999994 799999999999999987653 2368999999999999998 668999999
Q ss_pred EchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccC---CchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhh
Q 021023 119 ESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVK---PHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEI 195 (318)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (318)
||+||.+++.++.++|++|+++|+++|......... .................... .................
T Consensus 73 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA----SRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHTHHHHHHHH
T ss_pred cccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccc----ccccccccccccccccc
Confidence 999999999999999999999999999886532110 00111111111000000000 00000000001111111
Q ss_pred hhCCCCcCCccchhhHHHHhh---hchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccc
Q 021023 196 RANPYCYKGRPRLKTGYELMR---VSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGL 272 (318)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 272 (318)
.. .......... ...+....++++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||++
T Consensus 149 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 149 RS---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHFL 217 (228)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSSTH
T ss_pred cc---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCcc
Confidence 00 1111111111 234455677888999999999999999999998888888 789999999999999
Q ss_pred cccCCcc
Q 021023 273 LYGEPEE 279 (318)
Q Consensus 273 ~~~~p~~ 279 (318)
++++|++
T Consensus 218 ~~~~p~~ 224 (228)
T PF12697_consen 218 FLEQPDE 224 (228)
T ss_dssp HHHSHHH
T ss_pred HHHCHHH
Confidence 9987754
No 35
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=210.02 Aligned_cols=265 Identities=15% Similarity=0.171 Sum_probs=163.8
Q ss_pred CCeeEEEEeecCCCCCCceEEEEEccCCcccccc------------hhHHHH---HHHhcCcEEEEecCCCC-cCCCCCC
Q 021023 20 RRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG------------MNSTAI---RLANEGYACYGIDYQGH-GKSAGLS 83 (318)
Q Consensus 20 ~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~------------~~~~~~---~l~~~g~~v~~~d~~G~-G~s~~~~ 83 (318)
+|.+++|..++..+...+|+|||+||++++...| |..++. .|...+|+|+++|++|+ |.|.++.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 5678899999864323468899999999998742 355542 34345799999999983 4443221
Q ss_pred C-------------CCCChHhHHHHHHHHHHHHHhhhhccCce-EEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 84 G-------------YIDNFDDLVDDCFNHFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 84 ~-------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
. ..++++++++++.++++.+ +.++ ++++||||||.+++.+|.++|++|+++|++++....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDAL------GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh------CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 0 1368999999999999999 7888 589999999999999999999999999999987644
Q ss_pred ccccCCchhHHHHHhhhhhcCCCcc--------cCCChhh-h-h----hhhcCh-hhhHhhhhC-----C----------
Q 021023 150 AENVKPHPLVISVLTKLCKFIPTWK--------IIPSQDI-V-D----VAFKLP-EKRKEIRAN-----P---------- 199 (318)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~-~----~~~~~~-~~~~~~~~~-----~---------- 199 (318)
..... .........+.. .+.+. ..+.... . . ...... .....+... +
T Consensus 185 ~~~~~--~~~~~~~~~i~~-~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~ 261 (379)
T PRK00175 185 SAQNI--AFNEVARQAILA-DPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQV 261 (379)
T ss_pred CHHHH--HHHHHHHHHHHh-CCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchH
Confidence 21100 000000111100 00000 0000000 0 0 000000 000000000 0
Q ss_pred -----------CCcCCccchhhHHHHhhhc-------hhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCC--C
Q 021023 200 -----------YCYKGRPRLKTGYELMRVS-------MDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSS--D 259 (318)
Q Consensus 200 -----------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~ 259 (318)
................... .++...+.+|++|+|+|+|++|.++|++.++.+.+.++.. .
T Consensus 262 ~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~ 341 (379)
T PRK00175 262 ESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGAD 341 (379)
T ss_pred HHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCC
Confidence 0000000000011111100 1355678899999999999999999999999999998321 2
Q ss_pred ceEEEec-CCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 260 KTMKLYE-GMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 260 ~~~~~~~-~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
+++.+++ ++||..++|+|+ ++++.|.+||.+...
T Consensus 342 ~~l~~i~~~~GH~~~le~p~----~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 342 VSYAEIDSPYGHDAFLLDDP----RYGRLVRAFLERAAR 376 (379)
T ss_pred eEEEEeCCCCCchhHhcCHH----HHHHHHHHHHHhhhh
Confidence 3777775 999999998775 499999999987543
No 36
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=1.3e-30 Score=201.32 Aligned_cols=248 Identities=15% Similarity=0.190 Sum_probs=156.4
Q ss_pred cCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHH
Q 021023 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFN 98 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 98 (318)
.+|.+++|.. |. +.+|+|||+||++.+...| ..+...|.++||+|+++|+||||.|.......++++++++++.+
T Consensus 4 ~~~~~~~~~~--~~--~~~p~vvliHG~~~~~~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMK--PN--RQPPHFVLIHGISGGSWCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccc--cc--CCCCeEEEECCCCCCcCcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 3566777764 43 4578899999999999888 99999998889999999999999886443333689999999999
Q ss_pred HHHHHHhhhhcc-CceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhh---hcCC-Cc
Q 021023 99 HFTSICEKEENK-EKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLC---KFIP-TW 173 (318)
Q Consensus 99 ~l~~l~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~ 173 (318)
+++.+ . .++++|+||||||.++..++.++|++|+++|++++....... ............+. .... .+
T Consensus 79 ~i~~l------~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PLN02211 79 FLSSL------PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGF-QTDEDMKDGVPDLSEFGDVYELGF 151 (273)
T ss_pred HHHhc------CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCC-CHHHHHhccccchhhhccceeeee
Confidence 99876 3 479999999999999999999999999999999875431100 00000000000000 0000 00
Q ss_pred ccCC---------Chhhhhhh-hcC-hhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcc-cccEEEEEeCCCc
Q 021023 174 KIIP---------SQDIVDVA-FKL-PEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEV-SIPFIVLHGEEDK 241 (318)
Q Consensus 174 ~~~~---------~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~ 241 (318)
.... ...+.... +.. +............. ... ..+. ..+......++ ++|+++|.|++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~-~~~~~~~~~~~~~vP~l~I~g~~D~ 223 (273)
T PLN02211 152 GLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRP---GPI----LALR-SARFEEETGDIDKVPRVYIKTLHDH 223 (273)
T ss_pred ccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCC---cCc----cccc-cccccccccccCccceEEEEeCCCC
Confidence 0000 00000000 000 00000000000000 000 0000 01111223344 7899999999999
Q ss_pred ccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 242 VTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
.+|++.++.+.+.+ +..+++.++ +||.+++++|++ +...|.+...
T Consensus 224 ~ip~~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~----~~~~i~~~a~ 268 (273)
T PLN02211 224 VVKPEQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFL----LFGLLIKAAA 268 (273)
T ss_pred CCCHHHHHHHHHhC--CccEEEEEC-CCCCccccCHHH----HHHHHHHHHH
Confidence 99999999999888 566899997 899999988865 6666666544
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=2e-30 Score=199.55 Aligned_cols=235 Identities=19% Similarity=0.271 Sum_probs=146.3
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
+|+|||+||++++...| ..+++.|.+ +|+|+++|+||+|.|..... ++++++++++.+. ..+++++
T Consensus 4 ~~~iv~~HG~~~~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~----------~~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQ----------APDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHh----------CCCCeEE
Confidence 47899999999999977 999999965 69999999999999875432 4666666655432 2368999
Q ss_pred EEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCc-hhHHHHHhhhhhcCCCcccCCChhhhh-hhhcCh---hh
Q 021023 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPH-PLVISVLTKLCKFIPTWKIIPSQDIVD-VAFKLP---EK 191 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 191 (318)
+||||||.+++.++.++|++++++|++++........... .........+..............+.. ...... ..
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQD 149 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchH
Confidence 9999999999999999999999999998875432111000 000000100000000000000000000 000000 00
Q ss_pred hHhhhhCCCCcCC--ccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCc
Q 021023 192 RKEIRANPYCYKG--RPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMW 269 (318)
Q Consensus 192 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 269 (318)
............. ...+....... ...+....+.++++|+++++|++|.++|++..+.+.+.+ +++++++++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~g 226 (245)
T TIGR01738 150 ARALKQTLLARPTPNVQVLQAGLEIL-ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFAKAA 226 (245)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHh-hcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeCCCC
Confidence 0000000000000 00111111111 112344567889999999999999999999988888887 788999999999
Q ss_pred ccccccCCccchHHHHHHHHHHH
Q 021023 270 HGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 270 H~~~~~~p~~~~~~~~~~i~~fl 292 (318)
|++++|+|++ +++.+.+|+
T Consensus 227 H~~~~e~p~~----~~~~i~~fi 245 (245)
T TIGR01738 227 HAPFLSHAEA----FCALLVAFK 245 (245)
T ss_pred CCccccCHHH----HHHHHHhhC
Confidence 9999977754 888888885
No 38
>PLN02511 hydrolase
Probab=99.97 E-value=7.6e-30 Score=206.14 Aligned_cols=282 Identities=10% Similarity=0.073 Sum_probs=172.3
Q ss_pred CCccceEEEeecCCeeEEEEeecCC---CCCCceEEEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCCCCCC
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQ---NQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGLS 83 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~---~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 83 (318)
.+.+++..+.+.||..+.+..+.+. ....+|+||++||+++++.. |+..++..+.++||+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 3456667788899988887655321 12457899999999877643 6566777777889999999999999997543
Q ss_pred CCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCC--cCEEEEeCCCcccccc---cCCc--
Q 021023 84 GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY--FDGAVLVAPMCKIAEN---VKPH-- 156 (318)
Q Consensus 84 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~---~~~~-- 156 (318)
.. .....+++|+.++++++.. ..+..+++++||||||.+++.++.++|++ |.++++++++.+.... ....
T Consensus 148 ~~-~~~~~~~~Dl~~~i~~l~~--~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~ 224 (388)
T PLN02511 148 PQ-FYSASFTGDLRQVVDHVAG--RYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFN 224 (388)
T ss_pred cC-EEcCCchHHHHHHHHHHHH--HCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHH
Confidence 32 2335678899999999943 33456899999999999999999999987 8888888876653110 0000
Q ss_pred hhHHH-HHhhhhhcCCCcc--cCC-Chhh-hhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccccc
Q 021023 157 PLVIS-VLTKLCKFIPTWK--IIP-SQDI-VDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIP 231 (318)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~~--~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 231 (318)
..... +...+........ +.. ...+ ...........+ +..... .....+.....++. ..+....+.+|++|
T Consensus 225 ~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-fd~~~t--~~~~gf~~~~~yy~-~~s~~~~L~~I~vP 300 (388)
T PLN02511 225 NVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRD-FDDGLT--RVSFGFKSVDAYYS-NSSSSDSIKHVRVP 300 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHH-HHHhhh--hhcCCCCCHHHHHH-HcCchhhhccCCCC
Confidence 00000 0000100000000 000 0000 000000000000 000000 00001111111111 12344678899999
Q ss_pred EEEEEeCCCcccChHHH-HHHHHHhcCCCceEEEecCCcccccccCCccc--hHHHHHHHHHHHHHHhcc
Q 021023 232 FIVLHGEEDKVTDKAVS-VQLFKVASSSDKTMKLYEGMWHGLLYGEPEEN--TQIVFRDILNWLDERVAT 298 (318)
Q Consensus 232 ~lii~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~--~~~~~~~i~~fl~~~~~~ 298 (318)
+|+|+|++|+++|.+.. ....+.. +++++++++++||..++|.|+.. ...+.+.+.+||......
T Consensus 301 tLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 301 LLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred eEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 99999999999997754 3344444 78999999999999999888532 123578888998877644
No 39
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=6.2e-30 Score=191.72 Aligned_cols=272 Identities=18% Similarity=0.216 Sum_probs=155.5
Q ss_pred ceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHh
Q 021023 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDD 91 (318)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 91 (318)
....+...++..+......+.. ..++++|++||+|.+...| -.-.+.|++ .++|+++|++|+|.|+.+.-.. +...
T Consensus 66 ~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g~f-~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~-d~~~ 141 (365)
T KOG4409|consen 66 SKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLGLF-FRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSI-DPTT 141 (365)
T ss_pred ceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHHHH-HHhhhhhhh-cCceEEecccCCCCCCCCCCCC-Cccc
Confidence 3344444455555555554443 5677899999999999878 555578877 5999999999999999765432 2111
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccc-c-----CCchhHHHHHhh
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAEN-V-----KPHPLVISVLTK 165 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~-----~~~~~~~~~~~~ 165 (318)
......+-|+.. +...+.++.+|+|||+||++|..||.+||++|+.|||++|....... . .+..........
T Consensus 142 ~e~~fvesiE~W--R~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~ 219 (365)
T KOG4409|consen 142 AEKEFVESIEQW--RKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFL 219 (365)
T ss_pred chHHHHHHHHHH--HHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhh
Confidence 122233333333 22338899999999999999999999999999999999998766532 1 111111111111
Q ss_pred -hhhcCCCcccCCChhhhhhhhcChh-----------hhHhhhhCC-CCcCCccchhhHHHHhh-----hchhHHhhcCc
Q 021023 166 -LCKFIPTWKIIPSQDIVDVAFKLPE-----------KRKEIRANP-YCYKGRPRLKTGYELMR-----VSMDLENRLDE 227 (318)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 227 (318)
.....|.........+...+..... ..+.+.... ......+.-...+..+. ......+.+..
T Consensus 220 ~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~ 299 (365)
T KOG4409|consen 220 VATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRE 299 (365)
T ss_pred hhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHh
Confidence 1111111100000000000000000 000000000 00011111111111111 11233344444
Q ss_pred cc--ccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 228 VS--IPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 228 i~--~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
++ +|+++|+|++|.+ +.....++...+....++.++++++||.+++++|+. +++.+..++++
T Consensus 300 l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~----Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 300 LKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF----FNQIVLEECDK 363 (365)
T ss_pred hccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHH----HHHHHHHHHhc
Confidence 44 9999999999976 444445555544445689999999999999988865 77777777654
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.7e-30 Score=202.99 Aligned_cols=248 Identities=20% Similarity=0.264 Sum_probs=160.7
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCc-CCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHG-KSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G-~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
..+++||++|||+++...| +..+..|.+. |+.|+++|++|+| .|..+....++..++++.+..+.... ...
T Consensus 56 ~~~~pvlllHGF~~~~~~w-~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~------~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW-RRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV------FVE 128 (326)
T ss_pred CCCCcEEEeccccCCcccH-hhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh------cCc
Confidence 3678999999999988888 9999988776 5999999999999 55555555688999999999888887 778
Q ss_pred eEEEEEEchhHHHHHHHHhhCCCCcCEEE---EeCCCcccccccCC--chhHHHHHhhhhhcCCCcccCCChhhhhhhhc
Q 021023 113 MRYLLGESMGGAMVLLLHRKKPDYFDGAV---LVAPMCKIAENVKP--HPLVISVLTKLCKFIPTWKIIPSQDIVDVAFK 187 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v---l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (318)
+++++|||+||.+|+.+|+.+|+.|++++ ++++.....+.... ...............+.....+...+......
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 208 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLR 208 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhc
Confidence 89999999999999999999999999999 55555544321110 01111111111111111111110000000000
Q ss_pred -------Chh-hhHh---hhhCC--CCcCCccchhhHHHHhhhchhHHhhcCccc-ccEEEEEeCCCcccChHHHHHHHH
Q 021023 188 -------LPE-KRKE---IRANP--YCYKGRPRLKTGYELMRVSMDLENRLDEVS-IPFIVLHGEEDKVTDKAVSVQLFK 253 (318)
Q Consensus 188 -------~~~-~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D~~~~~~~~~~~~~ 253 (318)
+.. .... ....+ .........................+.++. +|+++++|++|.++|.+.++.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~ 288 (326)
T KOG1454|consen 209 CLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKK 288 (326)
T ss_pred ceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHh
Confidence 000 0000 00000 000000000000000000122233456665 999999999999999999999998
Q ss_pred HhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 254 VASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 254 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
++ +++++++++++||.+++|.|++ +++.|..|+...
T Consensus 289 ~~--pn~~~~~I~~~gH~~h~e~Pe~----~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 289 KL--PNAELVEIPGAGHLPHLERPEE----VAALLRSFIARL 324 (326)
T ss_pred hC--CCceEEEeCCCCcccccCCHHH----HHHHHHHHHHHh
Confidence 88 8999999999999999977765 999999999865
No 41
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.7e-29 Score=194.88 Aligned_cols=233 Identities=20% Similarity=0.295 Sum_probs=148.0
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-CCCChHhHHHH-HHHHHHHHHhhhhccCceE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDDLVDD-CFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~~ 114 (318)
+|+||++||++++...| ..+++.|+ +||+|+++|+||+|.|..+.. ...++++.+++ +..+++.+ +.+++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL------GIEPF 72 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc------CCCeE
Confidence 36799999999999988 99999997 789999999999999976543 33577888888 66666666 67899
Q ss_pred EEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHH---HHHhhhhhcCCCcccCCChhhhhhhhc----
Q 021023 115 YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVI---SVLTKLCKFIPTWKIIPSQDIVDVAFK---- 187 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 187 (318)
+++|||+||.+++.+|.++|+.|++++++++............... .....+... ....+......
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQE-------GLEAFLDDWYQQPLF 145 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhc-------CccHHHHHHhcCcee
Confidence 9999999999999999999999999999998654321110000000 000000000 00000000000
Q ss_pred ------ChhhhHhhhhCCCCcCCccchhhHHHHh--hhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCC
Q 021023 188 ------LPEKRKEIRANPYCYKGRPRLKTGYELM--RVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSD 259 (318)
Q Consensus 188 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 259 (318)
.......+...... ............. ....+....+.++++|+++++|++|..++ +..+.+.+.. ++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~ 221 (251)
T TIGR03695 146 ASQKNLPPEQRQALRAKRLA-NNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--PN 221 (251)
T ss_pred eecccCChHHhHHHHHhccc-ccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--CC
Confidence 00000000000000 0000011110000 01123334567889999999999998764 4555566655 67
Q ss_pred ceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 260 KTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 260 ~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
+++++++++||++++++|+ ++.+.|.+|+
T Consensus 222 ~~~~~~~~~gH~~~~e~~~----~~~~~i~~~l 250 (251)
T TIGR03695 222 LTLVIIANAGHNIHLENPE----AFAKILLAFL 250 (251)
T ss_pred CcEEEEcCCCCCcCccChH----HHHHHHHHHh
Confidence 8999999999999997775 4888888887
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.97 E-value=1.4e-28 Score=199.49 Aligned_cols=243 Identities=13% Similarity=0.105 Sum_probs=161.2
Q ss_pred CccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCC
Q 021023 9 IKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (318)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 88 (318)
...++..+...+|.+|.++.+.|...++.|+||++||+++....++..+++.|+++||.|+++|+||+|.|.+.... .+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-~d 244 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-QD 244 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-cc
Confidence 34667777777887999999988754677888888887766433337888999999999999999999998653211 12
Q ss_pred hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHH----HHh
Q 021023 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVIS----VLT 164 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~----~~~ 164 (318)
.. ....++++++.....++..+++++||||||.+++.+|..+|++|+++|+++|+...... ....... ...
T Consensus 245 ~~---~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~--~~~~~~~~p~~~~~ 319 (414)
T PRK05077 245 SS---LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT--DPKRQQQVPEMYLD 319 (414)
T ss_pred HH---HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc--chhhhhhchHHHHH
Confidence 22 22346677776555567789999999999999999999999999999999988642100 0000000 000
Q ss_pred hhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhc-CcccccEEEEEeCCCccc
Q 021023 165 KLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRL-DEVSIPFIVLHGEEDKVT 243 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P~lii~G~~D~~~ 243 (318)
.+...+. . .. .....+......+. ......+ .++++|+|+|+|++|.++
T Consensus 320 ~la~~lg---~------------~~-------------~~~~~l~~~l~~~s--l~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 320 VLASRLG---M------------HD-------------ASDEALRVELNRYS--LKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHhC---C------------CC-------------CChHHHHHHhhhcc--chhhhhhccCCCCcEEEEecCCCCCC
Confidence 0000000 0 00 00000000000000 0000111 568999999999999999
Q ss_pred ChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 244 DKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
|++.++.+.+.. ++.++++++++ ++.+ ..++++..+.+||.+++
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~e----~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVYR----NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---CccC----CHHHHHHHHHHHHHHHh
Confidence 999999887777 78899999986 3333 34569999999998765
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=3.5e-29 Score=197.60 Aligned_cols=262 Identities=15% Similarity=0.134 Sum_probs=159.8
Q ss_pred eEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-CCCChHh
Q 021023 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDD 91 (318)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~ 91 (318)
+.++...||.+++|..+++++ .++|||+||++++.. + ..+...+...+|+|+++|+||||.|..... ..++.++
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGT-D-PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCC-C-HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 456667789999998876532 456999999887765 3 344455555689999999999999985542 2357788
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccC------CchhHHHHHhh
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVK------PHPLVISVLTK 165 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~~ 165 (318)
+++|+..+++++ +.++++++||||||.+++.++.++|++|+++|++++......... ...........
T Consensus 81 ~~~dl~~l~~~l------~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (306)
T TIGR01249 81 LVADIEKLREKL------GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQR 154 (306)
T ss_pred HHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHH
Confidence 999999999888 778999999999999999999999999999999987654321100 00000000111
Q ss_pred hhhcCCCccc--CCChhhhhhhhcCh-hhh----Hh---hhh-CCCCcCC-------ccchhhHHHHh-----------h
Q 021023 166 LCKFIPTWKI--IPSQDIVDVAFKLP-EKR----KE---IRA-NPYCYKG-------RPRLKTGYELM-----------R 216 (318)
Q Consensus 166 ~~~~~~~~~~--~~~~~~~~~~~~~~-~~~----~~---~~~-~~~~~~~-------~~~~~~~~~~~-----------~ 216 (318)
+....+.... .....+...++... ... .. ... ....... ........... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (306)
T TIGR01249 155 FMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLD 234 (306)
T ss_pred HhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhc
Confidence 1111111000 00001111111111 000 00 000 0000000 00001111110 0
Q ss_pred hchhHHhhcCcc-cccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 217 VSMDLENRLDEV-SIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 217 ~~~~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
........+.++ ++|+++++|++|.++|.+.++.+++.+ ++.++++++++||.++. ++ ..+.|.+|+.+
T Consensus 235 ~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~---~~----~~~~i~~~~~~ 304 (306)
T TIGR01249 235 VENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAFD---PN----NLAALVHALET 304 (306)
T ss_pred CchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCCC---hH----HHHHHHHHHHH
Confidence 011233455667 689999999999999999999999988 68899999999999864 23 45555555543
No 44
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.6e-28 Score=199.23 Aligned_cols=261 Identities=18% Similarity=0.169 Sum_probs=151.6
Q ss_pred eEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHh----HHHHHHH
Q 021023 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDD----LVDDCFN 98 (318)
Q Consensus 23 ~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~----~~~d~~~ 98 (318)
.+.+..+.+. ..+|+|||+||++++...| ...+..|++ +|+|+++|+||||.|+.+.....+.++ +++++.+
T Consensus 93 ~~~~~~~~~~--~~~p~vvllHG~~~~~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 93 FINTVTFDSK--EDAPTLVMVHGYGASQGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred eEEEEEecCC--CCCCEEEEECCCCcchhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 5665555322 4568999999999988877 677788876 499999999999999765322122222 3445555
Q ss_pred HHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHH--------HHHhhh--hh
Q 021023 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVI--------SVLTKL--CK 168 (318)
Q Consensus 99 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~--------~~~~~~--~~ 168 (318)
+++.+ +.++++++||||||.+++.+|.++|++|+++|+++|............... .+...+ ..
T Consensus 169 ~~~~l------~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 169 WRKAK------NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HHHHc------CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 55555 678999999999999999999999999999999998754322111000000 000000 00
Q ss_pred cCCCccc---CC-Chhhhhhhh----cCh--------hhhHhhhhCCC-CcCCccchhhHHHHh-----hhchhHHhhcC
Q 021023 169 FIPTWKI---IP-SQDIVDVAF----KLP--------EKRKEIRANPY-CYKGRPRLKTGYELM-----RVSMDLENRLD 226 (318)
Q Consensus 169 ~~~~~~~---~~-~~~~~~~~~----~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 226 (318)
..+.... .+ ...+..... ... .....+..... ............... ....+....+.
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESAS 322 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcc
Confidence 0000000 00 000000000 000 00000000000 000000000000000 11234455678
Q ss_pred cccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhccC
Q 021023 227 EVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATG 299 (318)
Q Consensus 227 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~ 299 (318)
++++|+++++|++|.+.+ .....+.+... ..+++++++++||+++.|+|+. +++.+.+|++..+...
T Consensus 323 ~I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~----f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSG----FHSAVLYACRKYLSPD 389 (402)
T ss_pred cCCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHH----HHHHHHHHHHHhccCC
Confidence 899999999999998765 55555555552 4578999999999999988865 7777787777766553
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=2.9e-29 Score=204.45 Aligned_cols=247 Identities=19% Similarity=0.242 Sum_probs=158.2
Q ss_pred ecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHH
Q 021023 18 NSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF 97 (318)
Q Consensus 18 ~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 97 (318)
..++.+++|..+++. ..++|||+||++++...| ..+...|.+ +|+|+++|+||||.|...... .+++++++++.
T Consensus 115 ~~~~~~i~~~~~g~~---~~~~vl~~HG~~~~~~~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~ 188 (371)
T PRK14875 115 RIGGRTVRYLRLGEG---DGTPVVLIHGFGGDLNNW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA-GSLDELAAAVL 188 (371)
T ss_pred eEcCcEEEEecccCC---CCCeEEEECCCCCccchH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC-CCHHHHHHHHH
Confidence 345777887766542 357899999999999988 888888865 499999999999999654333 58999999999
Q ss_pred HHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCC
Q 021023 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIP 177 (318)
Q Consensus 98 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (318)
.+++.+ +..+++++|||+||.+++.+|.++|+++.++|+++|....... . ......+. .... ...
T Consensus 189 ~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-~-~~~~~~~~----~~~~---~~~ 253 (371)
T PRK14875 189 AFLDAL------GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-N-GDYIDGFV----AAES---RRE 253 (371)
T ss_pred HHHHhc------CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-c-hhHHHHhh----cccc---hhH
Confidence 999887 7789999999999999999999999999999999886432210 0 00000000 0000 000
Q ss_pred ChhhhhhhhcCh-----hhhHhhhhCCCCcCCccchhhHHHH-h---hhchhHHhhcCcccccEEEEEeCCCcccChHHH
Q 021023 178 SQDIVDVAFKLP-----EKRKEIRANPYCYKGRPRLKTGYEL-M---RVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVS 248 (318)
Q Consensus 178 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~ 248 (318)
........+... ..................+...... . ....+....+.++++|+++++|++|.++|++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~ 333 (371)
T PRK14875 254 LKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA 333 (371)
T ss_pred HHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHH
Confidence 000000000000 0000000000000000000000000 0 011234445678899999999999999998866
Q ss_pred HHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 249 VQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
+.+. .++++.+++++||++++++|+ ++.+.|.+|+++
T Consensus 334 ~~l~-----~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~~ 370 (371)
T PRK14875 334 QGLP-----DGVAVHVLPGAGHMPQMEAAA----DVNRLLAEFLGK 370 (371)
T ss_pred hhcc-----CCCeEEEeCCCCCChhhhCHH----HHHHHHHHHhcc
Confidence 5432 457899999999999997764 488889899864
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.96 E-value=6.9e-28 Score=191.25 Aligned_cols=278 Identities=13% Similarity=0.084 Sum_probs=165.3
Q ss_pred CccceEEEeecCCeeEEEEeec-CCCCCCceEEEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCC
Q 021023 9 IKYDEEFILNSRRVKLFTCSWI-PQNQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYI 86 (318)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~-p~~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 86 (318)
+..+...+...||..+.+.... |.....+|+||++||++++... |+..++..|.++||+|+++|+||+|.+.......
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~ 108 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRI 108 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcce
Confidence 4455566788899777665432 2223457899999999877543 4467889999999999999999999876432221
Q ss_pred CChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCC--cCEEEEeCCCcccccccC---Cc--hhH
Q 021023 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY--FDGAVLVAPMCKIAENVK---PH--PLV 159 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~---~~--~~~ 159 (318)
+. ....+|+..+++++++ ..+..+++++||||||.+++.++.++++. +.++|+++++........ .. ...
T Consensus 109 ~~-~~~~~D~~~~i~~l~~--~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~ 185 (324)
T PRK10985 109 YH-SGETEDARFFLRWLQR--EFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVY 185 (324)
T ss_pred EC-CCchHHHHHHHHHHHH--hCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHH
Confidence 22 2236788888888843 23567899999999999988888776543 899999998865432110 00 000
Q ss_pred HHH-Hhhhh----hcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEE
Q 021023 160 ISV-LTKLC----KFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIV 234 (318)
Q Consensus 160 ~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 234 (318)
... ...+. .....+....... ..........++. . .........+......+.. .+....+.++++|+++
T Consensus 186 ~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f-d--~~~~~~~~g~~~~~~~y~~-~~~~~~l~~i~~P~li 260 (324)
T PRK10985 186 QRYLLNLLKANAARKLAAYPGTLPIN-LAQLKSVRRLREF-D--DLITARIHGFADAIDYYRQ-CSALPLLNQIRKPTLI 260 (324)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC-HHHHhcCCcHHHH-h--hhheeccCCCCCHHHHHHH-CChHHHHhCCCCCEEE
Confidence 000 00000 0000000000000 0000000000000 0 0000001122222333322 2344667899999999
Q ss_pred EEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCc-cchHHHHHHHHHHHHHHh
Q 021023 235 LHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPE-ENTQIVFRDILNWLDERV 296 (318)
Q Consensus 235 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~-~~~~~~~~~i~~fl~~~~ 296 (318)
|+|++|++++++....+.+.. +++++.+++++||+.+++..- ....-.-+.+.+|+....
T Consensus 261 i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 261 IHAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred EecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 999999999988777665554 678999999999999986421 112346677778886543
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=2.1e-27 Score=220.29 Aligned_cols=247 Identities=16% Similarity=0.208 Sum_probs=158.2
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCC-------CCCCChHhHHHHHHHHHHHHHhhh
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-------GYIDNFDDLVDDCFNHFTSICEKE 107 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~ 107 (318)
..+++|||+||++++...| ..++..|.+ +|+|+++|+||||.|.... ...++++.+++++.++++.+
T Consensus 1369 ~~~~~vVllHG~~~s~~~w-~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---- 1442 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGEDW-IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---- 1442 (1655)
T ss_pred CCCCeEEEECCCCCCHHHH-HHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh----
Confidence 3467899999999999988 899999965 5999999999999997532 12357899999999999988
Q ss_pred hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHH-hhhhhcCCCcccCCChhhhhhhh
Q 021023 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVL-TKLCKFIPTWKIIPSQDIVDVAF 186 (318)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 186 (318)
+.++++|+||||||.+++.++.++|++|+++|++++......... ....... ......... .....+...++
T Consensus 1443 --~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~--~~~~~~~~~~~~~~l~~---~g~~~~~~~~~ 1515 (1655)
T PLN02980 1443 --TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVA--RKIRSAKDDSRARMLID---HGLEIFLENWY 1515 (1655)
T ss_pred --CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHH--HHHHhhhhhHHHHHHHh---hhHHHHHHHhc
Confidence 778999999999999999999999999999999987644321100 0000000 000000000 00000000011
Q ss_pred c---------ChhhhHhhhhCCCCcCCccchhhHHHHh--hhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHh
Q 021023 187 K---------LPEKRKEIRANPYCYKGRPRLKTGYELM--RVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVA 255 (318)
Q Consensus 187 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 255 (318)
. .+......... ................ ....+..+.+.++++|+|+|+|++|.+++ +.+.++.+.+
T Consensus 1516 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i 1593 (1655)
T PLN02980 1516 SGELWKSLRNHPHFNKIVASR-LLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREI 1593 (1655)
T ss_pred cHHHhhhhccCHHHHHHHHHH-HhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHc
Confidence 0 00000000000 0000000011111111 01234456788999999999999999875 5666777766
Q ss_pred cCC----------CceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhccCC
Q 021023 256 SSS----------DKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGN 300 (318)
Q Consensus 256 ~~~----------~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~ 300 (318)
... .+++++++++||.+++|+|+. +++.|.+||.+...+..
T Consensus 1594 ~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~----f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1594 GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLP----VIRALRKFLTRLHNSST 1644 (1655)
T ss_pred cccccccccccccceEEEEECCCCCchHHHCHHH----HHHHHHHHHHhccccCC
Confidence 321 258999999999999987764 99999999997654443
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.96 E-value=1.7e-26 Score=178.83 Aligned_cols=253 Identities=15% Similarity=0.134 Sum_probs=156.2
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcc----cccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChH
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAME----CSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFD 90 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 90 (318)
.....+|.++...++.|.+ ..++.||++||++.. ...+ ..+++.|+++||.|+++|+||||.|.+.. .+++
T Consensus 5 ~~~~~~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~~~-~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~ 79 (274)
T TIGR03100 5 LTFSCEGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHRQF-VLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFE 79 (274)
T ss_pred EEEEcCCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchhHH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHH
Confidence 3445678889998888875 345567777876532 2223 67889999999999999999999987542 3678
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI 170 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (318)
++.+|+.++++++++.. .+.++++++|||+||.+++.++.. +++|+++|+++|........... ........ ...
T Consensus 80 ~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~-~~~~~~~~--~~~ 154 (274)
T TIGR03100 80 GIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS-RIRHYYLG--QLL 154 (274)
T ss_pred HHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH-HHHHHHHH--HHh
Confidence 88999999999985421 134679999999999999999765 46799999999875432211111 11111000 000
Q ss_pred CCcccCCChhhhhhhhcC-hhh---hHhhhhCCCCc--CCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccC
Q 021023 171 PTWKIIPSQDIVDVAFKL-PEK---RKEIRANPYCY--KGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTD 244 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 244 (318)
.. .+....... ... ...+......+ ........ ....+....+..+++|+++++|..|...+
T Consensus 155 ~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~ 222 (274)
T TIGR03100 155 SA-------DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ 222 (274)
T ss_pred Ch-------HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH
Confidence 00 000000000 000 00000000000 00000000 01234455666779999999999998864
Q ss_pred hHHH------HHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 245 KAVS------VQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 245 ~~~~------~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
... ....+.+..+++++..+++++|++..+ ...+++.+.|.+||+
T Consensus 223 -~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 223 -EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred -HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 222 334444555789999999999987663 345679999999995
No 49
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.96 E-value=6.5e-27 Score=175.25 Aligned_cols=261 Identities=18% Similarity=0.177 Sum_probs=177.3
Q ss_pred eeEEEEee-cCCCCCCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHH
Q 021023 22 VKLFTCSW-IPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNH 99 (318)
Q Consensus 22 ~~l~~~~~-~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 99 (318)
+++.|..+ ...+....|+++++||+.++...| ..+...|+.. |..|+++|.|.||.|+..... +...+++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCCCH-HHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHH
Confidence 67777776 444446789999999999999999 9999999876 889999999999999977665 799999999999
Q ss_pred HHHHHhhhhccCceEEEEEEchhH-HHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCC
Q 021023 100 FTSICEKEENKEKMRYLLGESMGG-AMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPS 178 (318)
Q Consensus 100 l~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (318)
++.... .....+++++|||||| .+++..+...|+.+..+|+++-.+.... ............+............
T Consensus 113 i~~v~~--~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~--~~~~e~~e~i~~m~~~d~~~~~~~~ 188 (315)
T KOG2382|consen 113 IDGVGG--STRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVG--RSYGEYRELIKAMIQLDLSIGVSRG 188 (315)
T ss_pred HHHccc--ccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCC--cccchHHHHHHHHHhcccccccccc
Confidence 999832 1236789999999999 7888888899999999998876553211 1122222333333222221100111
Q ss_pred h----hhhhhhhcChhhhHhhhhCCCC------cCCccchhhHHHHhhh--chhHHhhc--CcccccEEEEEeCCCcccC
Q 021023 179 Q----DIVDVAFKLPEKRKEIRANPYC------YKGRPRLKTGYELMRV--SMDLENRL--DEVSIPFIVLHGEEDKVTD 244 (318)
Q Consensus 179 ~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~P~lii~G~~D~~~~ 244 (318)
. ........+.....++..+... +..........+.+.. ...+...+ .....||+++.|.++..++
T Consensus 189 rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 189 RKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 1 1111122233333333332221 1112222222222222 22222333 5567899999999999999
Q ss_pred hHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 245 KAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.+.-.++.+.+ +.++++.++++||+.+.|+|++ +++.|.+|+.+.
T Consensus 269 ~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~----~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 269 DEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEE----FIESISEFLEEP 313 (315)
T ss_pred hhHHHHHHHhc--cchheeecccCCceeecCCHHH----HHHHHHHHhccc
Confidence 99888888888 7899999999999999988865 899999988754
No 50
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.95 E-value=3.2e-27 Score=164.31 Aligned_cols=238 Identities=18% Similarity=0.270 Sum_probs=181.6
Q ss_pred ccccCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHH-hcCcEEEEecCCCCcCCCCC
Q 021023 4 EIDHNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLA-NEGYACYGIDYQGHGKSAGL 82 (318)
Q Consensus 4 ~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~ 82 (318)
|...++++++..+.+.|..+++.+....+ .+.|+++++||..++.... -+.+.-+- .-+.+|+.+++||+|.|.+.
T Consensus 47 P~~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 47 PKEFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred ccccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCcccch-hhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 45567888999999999999998887744 5889999999999998866 55555443 44899999999999999987
Q ss_pred CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHH
Q 021023 83 SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISV 162 (318)
Q Consensus 83 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (318)
+ +-+.+.-|..++++++..++..+..+++++|.|.||.+|+.+|+++.+++.++|+-+.+........+.-
T Consensus 124 p----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v----- 194 (300)
T KOG4391|consen 124 P----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV----- 194 (300)
T ss_pred c----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee-----
Confidence 5 3345566888999999888888899999999999999999999999999999999998876532211100
Q ss_pred HhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcc
Q 021023 163 LTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKV 242 (318)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 242 (318)
.+ ...+.+..... .+.......+.+.+.|.|++.|..|.+
T Consensus 195 -------~p----~~~k~i~~lc~-----------------------------kn~~~S~~ki~~~~~P~LFiSGlkDel 234 (300)
T KOG4391|consen 195 -------FP----FPMKYIPLLCY-----------------------------KNKWLSYRKIGQCRMPFLFISGLKDEL 234 (300)
T ss_pred -------cc----chhhHHHHHHH-----------------------------HhhhcchhhhccccCceEEeecCcccc
Confidence 00 00000000000 000111233445678999999999999
Q ss_pred cChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhcc
Q 021023 243 TDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT 298 (318)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 298 (318)
|||..++.+++.+++...++..+|++.|.... ..+-.++.|.+||.+....
T Consensus 235 VPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~-----i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 235 VPPVMMRQLYELCPSRTKRLAEFPDGTHNDTW-----ICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CCcHHHHHHHHhCchhhhhheeCCCCccCceE-----EeccHHHHHHHHHHHhccC
Confidence 99999999999998888999999999998766 2234899999999988764
No 51
>PLN02872 triacylglycerol lipase
Probab=99.95 E-value=1.7e-26 Score=184.92 Aligned_cols=285 Identities=15% Similarity=0.172 Sum_probs=173.4
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCC----CCCceEEEEEccCCcccccch-----hHHHHHHHhcCcEEEEecCCCC
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQN----QEPKALIFICHGYAMECSIGM-----NSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~----~~~~~~iv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
..+++.+++.+.+.||..|....+.+.. ..++|+|+++||+++++..|. ..++..|+++||+|+++|+||+
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 3578899999999999999998874332 134688999999998888772 3566678899999999999998
Q ss_pred cCCCCC--------CCCCCChHhHH-HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC---CcCEEEEeC
Q 021023 77 GKSAGL--------SGYIDNFDDLV-DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVA 144 (318)
Q Consensus 77 G~s~~~--------~~~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~ 144 (318)
+.|.+. ....+++++++ .|+.++++++.+. ..++++++|||+||.+++.++ .+|+ +|+.+++++
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 865321 11135788888 7999999998542 347999999999999998555 5675 688889999
Q ss_pred CCcccccccCCchhHHHHH----hhhhhcCCCcccCCChhhhhhh----hcChh-hhH---hhhhCCCC-----------
Q 021023 145 PMCKIAENVKPHPLVISVL----TKLCKFIPTWKIIPSQDIVDVA----FKLPE-KRK---EIRANPYC----------- 201 (318)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~---~~~~~~~~----------- 201 (318)
|........ .+....+. ..+...+....+.+.......+ ..... ... .+......
T Consensus 195 P~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~ 272 (395)
T PLN02872 195 PISYLDHVT--APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLE 272 (395)
T ss_pred chhhhccCC--CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHh
Confidence 887553211 11111110 0010011111111111111000 00000 000 00000000
Q ss_pred -cCCccchhh----------------------HHHHhhhchhHHhhcCcc--cccEEEEEeCCCcccChHHHHHHHHHhc
Q 021023 202 -YKGRPRLKT----------------------GYELMRVSMDLENRLDEV--SIPFIVLHGEEDKVTDKAVSVQLFKVAS 256 (318)
Q Consensus 202 -~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~ 256 (318)
.....+... ....+.....+.-.+.++ ++|+++++|++|.+++++.++.+.+.+.
T Consensus 273 ~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp 352 (395)
T PLN02872 273 YEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELP 352 (395)
T ss_pred cCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCC
Confidence 000000000 011111111222345667 5799999999999999999999999984
Q ss_pred CCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhcc
Q 021023 257 SSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT 298 (318)
Q Consensus 257 ~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 298 (318)
. ..+++.+++++|..++-. ++..+++.+.|.+|+++....
T Consensus 353 ~-~~~l~~l~~~gH~dfi~~-~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 353 S-KPELLYLENYGHIDFLLS-TSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred C-ccEEEEcCCCCCHHHHhC-cchHHHHHHHHHHHHHHhhhc
Confidence 2 258888999999743301 134456999999999876544
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=2e-26 Score=198.83 Aligned_cols=263 Identities=14% Similarity=0.118 Sum_probs=157.1
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCC-CCCCChHhH
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-GYIDNFDDL 92 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 92 (318)
..+...||.+|+|..+++. ..|+|||+||++++...| ..+.+.| ..||+|+++|+||||.|.... ...++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~---~~~~ivllHG~~~~~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP---DRPTVVLVHGYPDNHEVW-DGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC---CCCeEEEEcCCCchHHHH-HHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 4556679999999988753 367899999999998877 8999999 567999999999999998543 234689999
Q ss_pred HHHHHHHHHHHHhhhhccCc-eEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCccccc-c-----cC--CchhHHH
Q 021023 93 VDDCFNHFTSICEKEENKEK-MRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKIAE-N-----VK--PHPLVIS 161 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~-~-----~~--~~~~~~~ 161 (318)
++|+..+++.+ +.. +++|+||||||.+++.++.+ .+.++..++.++++..... . .. .......
T Consensus 80 a~dl~~~i~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (582)
T PRK05855 80 ADDFAAVIDAV------SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLAR 153 (582)
T ss_pred HHHHHHHHHHh------CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhH
Confidence 99999999988 444 59999999999999888766 2344555554443221000 0 00 0000000
Q ss_pred HHhhhhhcC----CCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCc-------cchhhHHHHhhh---chhHHhhcCc
Q 021023 162 VLTKLCKFI----PTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGR-------PRLKTGYELMRV---SMDLENRLDE 227 (318)
Q Consensus 162 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~ 227 (318)
......... ....... .......... ................ .........+.. ..........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (582)
T PRK05855 154 ALGQLLRSWYIYLFHLPVLP-ELLWRLGLGR-AWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERY 231 (582)
T ss_pred HHHHHhhhHHHHHHhCCCCc-HHHhccchhh-HHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCC
Confidence 000000000 0000000 0000000000 0000000000000000 000000000000 0111122455
Q ss_pred ccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 228 VSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 228 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
+++|+++++|++|.++|++..+.+.+.+ ++.++++++ +||+++.|+|++ +.+.|.+|+.+..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQV----LAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhH----HHHHHHHHHHhcc
Confidence 8999999999999999999888877766 567777776 799999988764 8899999998754
No 53
>PRK10566 esterase; Provisional
Probab=99.95 E-value=6.6e-26 Score=174.36 Aligned_cols=212 Identities=17% Similarity=0.196 Sum_probs=137.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCCh-------HhHHHHHHHHHHHHHhhh
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNF-------DDLVDDCFNHFTSICEKE 107 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-------~~~~~d~~~~l~~l~~~~ 107 (318)
++.|+||++||++++...| ..+++.|+++||.|+++|+||+|.+...... ..+ ....+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcccchH-HHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999999988766 8899999999999999999999976422111 111 233567777888876544
Q ss_pred hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhc
Q 021023 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFK 187 (318)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (318)
..+.++++++|||+||.+++.++.++|+....++++++.. .. ...... .+.... .
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~---~~~~~~-~---------- 157 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY-FT----------SLARTL---FPPLIP-E---------- 157 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH-HH----------HHHHHh---cccccc-c----------
Confidence 4567899999999999999999998887333334433221 10 000000 000000 0
Q ss_pred ChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcc-cccEEEEEeCCCcccChHHHHHHHHHhcCC----CceE
Q 021023 188 LPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEV-SIPFIVLHGEEDKVTDKAVSVQLFKVASSS----DKTM 262 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~~~~ 262 (318)
.... ............ ..+....+.++ ++|+|+++|++|.++|++.++.+.+.+... ++++
T Consensus 158 ~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~ 223 (249)
T PRK10566 158 TAAQ-------------QAEFNNIVAPLA-EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTC 223 (249)
T ss_pred cccc-------------HHHHHHHHHHHh-hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEE
Confidence 0000 000000000000 01222344555 689999999999999999999999888542 3578
Q ss_pred EEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 263 KLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 263 ~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.+++++||.+.. ...+.+.+||+++
T Consensus 224 ~~~~~~~H~~~~--------~~~~~~~~fl~~~ 248 (249)
T PRK10566 224 LWEPGVRHRITP--------EALDAGVAFFRQH 248 (249)
T ss_pred EecCCCCCccCH--------HHHHHHHHHHHhh
Confidence 889999998642 3788999999865
No 54
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=179.47 Aligned_cols=262 Identities=12% Similarity=0.063 Sum_probs=163.4
Q ss_pred CeeEEEEeecCCCCCCceEEEEEccCCccc------------ccchhHHHH---HHHhcCcEEEEecCCCCcCCCCC---
Q 021023 21 RVKLFTCSWIPQNQEPKALIFICHGYAMEC------------SIGMNSTAI---RLANEGYACYGIDYQGHGKSAGL--- 82 (318)
Q Consensus 21 g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~------------~~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~--- 82 (318)
..+|.|..|+..+....++||++|++++++ ..||..++- .|-...|.||++|..|-|.|..+
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 468899999987656678999999998854 224444432 24334599999999987642110
Q ss_pred -----------------CCCCCChHhHHHHHHHHHHHHHhhhhccCceEE-EEEEchhHHHHHHHHhhCCCCcCEEEEeC
Q 021023 83 -----------------SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKPDYFDGAVLVA 144 (318)
Q Consensus 83 -----------------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 144 (318)
....++++++++++.++++.+ +.+++. ++||||||++++.+|.++|++|+++|+++
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l------gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL------GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 122368999999999999998 888886 99999999999999999999999999998
Q ss_pred CCcccccccCCchhHHHHHhhhhhcCCCcccC-------CCh------hhhhhhhcChhh-hHhhhhCC-CCc------C
Q 021023 145 PMCKIAENVKPHPLVISVLTKLCKFIPTWKII-------PSQ------DIVDVAFKLPEK-RKEIRANP-YCY------K 203 (318)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~~~~~-~~~~~~~~-~~~------~ 203 (318)
+......... ..............+.|... +.. ............ ........ ... .
T Consensus 194 ~~~~~~~~~~--~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~ 271 (389)
T PRK06765 194 GNPQNDAWTS--VNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVS 271 (389)
T ss_pred cCCCCChhHH--HHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcccccccccccc
Confidence 7654421100 00111111111111111100 000 000000111111 00000000 000 0
Q ss_pred --------------------CccchhhHHHHhhh------chhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC
Q 021023 204 --------------------GRPRLKTGYELMRV------SMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS 257 (318)
Q Consensus 204 --------------------~~~~~~~~~~~~~~------~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 257 (318)
....+......... ..++.+.+.++++|+|+|+|+.|.++|++.++.+.+.++.
T Consensus 272 ~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~ 351 (389)
T PRK06765 272 TLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQK 351 (389)
T ss_pred chhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh
Confidence 00000000011100 0135567788999999999999999999999998888843
Q ss_pred --CCceEEEecC-CcccccccCCccchHHHHHHHHHHHHH
Q 021023 258 --SDKTMKLYEG-MWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 258 --~~~~~~~~~~-~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
++++++++++ +||..++++|+ ++.+.|.+||++
T Consensus 352 ~~~~a~l~~I~s~~GH~~~le~p~----~~~~~I~~FL~~ 387 (389)
T PRK06765 352 QGKYAEVYEIESINGHMAGVFDIH----LFEKKIYEFLNR 387 (389)
T ss_pred cCCCeEEEEECCCCCcchhhcCHH----HHHHHHHHHHcc
Confidence 3689999985 99999997765 499999999865
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.94 E-value=7.5e-25 Score=175.96 Aligned_cols=266 Identities=17% Similarity=0.150 Sum_probs=159.2
Q ss_pred eecCCeeEEEEeecCCC-CCCceEEEEEccCCcccccc----hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHh
Q 021023 17 LNSRRVKLFTCSWIPQN-QEPKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDD 91 (318)
Q Consensus 17 ~~~~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 91 (318)
...++..+.. |.|.. ...+++||++||+..+...+ ...+++.|+++||+|+++|++|+|.+... .++++
T Consensus 43 ~~~~~~~l~~--~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d 116 (350)
T TIGR01836 43 YREDKVVLYR--YTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDD 116 (350)
T ss_pred EEcCcEEEEE--ecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHH
Confidence 3334444443 45542 23455699999976444322 16899999999999999999999887533 47777
Q ss_pred HHH-HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchh------HHHHHh
Q 021023 92 LVD-DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPL------VISVLT 164 (318)
Q Consensus 92 ~~~-d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~------~~~~~~ 164 (318)
++. ++.++++++++ ..+.++++++||||||.+++.+++.+|++|+++|+++++.++......... ......
T Consensus 117 ~~~~~~~~~v~~l~~--~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 194 (350)
T TIGR01836 117 YINGYIDKCVDYICR--TSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVD 194 (350)
T ss_pred HHHHHHHHHHHHHHH--HhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHH
Confidence 765 47888888843 336679999999999999999999999999999999998876432111000 000000
Q ss_pred hhhhcCCCcc-------cCCChhhhh------hhhcChhhhHhhh------hCCCCcCCccchhhHH-HHhhhch-----
Q 021023 165 KLCKFIPTWK-------IIPSQDIVD------VAFKLPEKRKEIR------ANPYCYKGRPRLKTGY-ELMRVSM----- 219 (318)
Q Consensus 165 ~~~~~~~~~~-------~~~~~~~~~------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~----- 219 (318)
... .++... ..+...... ....++.....+. .+..... ...+.... ..+....
T Consensus 195 ~~~-~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~-~~~~~~~~~~~~~~n~l~~g~ 272 (350)
T TIGR01836 195 TMG-NIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQA-GEAFRQFVKDFYQQNGLINGE 272 (350)
T ss_pred hcC-CCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCcc-HHHHHHHHHHHHhcCcccCCe
Confidence 000 000000 000000000 0001111111000 0000000 00000000 0100000
Q ss_pred ----hHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 220 ----DLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 220 ----~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
.....+.++++|+++++|++|.++|++.++.+.+.+.+.+.++++++ +||...+.++ ...+++++.+.+|+.+
T Consensus 273 ~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~-~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 273 VEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSG-KAQKEVPPAIGKWLQA 349 (350)
T ss_pred eEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECc-hhHhhhhHHHHHHHHh
Confidence 01123567899999999999999999999999998865567788887 6888877555 3567899999999975
No 56
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=1.1e-25 Score=154.92 Aligned_cols=246 Identities=12% Similarity=0.101 Sum_probs=158.8
Q ss_pred eecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhH---
Q 021023 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDL--- 92 (318)
Q Consensus 17 ~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~--- 92 (318)
...+|+.|.|..++... ..|+++.|..++...-|.+....|.+. -++++++|.||+|.|..+... +..+-.
T Consensus 26 v~vng~ql~y~~~G~G~----~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rk-f~~~ff~~D 100 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGP----NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERK-FEVQFFMKD 100 (277)
T ss_pred eeecCceeeeeecCCCC----ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCccc-chHHHHHHh
Confidence 34579999999997542 348888987766554336666666444 489999999999999876654 344444
Q ss_pred HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCC
Q 021023 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPT 172 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (318)
+++...+++.| +.+++.++|+|-||..|+.+|+++++.|.++|++++......... ...+-++....+.+.
T Consensus 101 a~~avdLM~aL------k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~---ma~kgiRdv~kWs~r 171 (277)
T KOG2984|consen 101 AEYAVDLMEAL------KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA---MAFKGIRDVNKWSAR 171 (277)
T ss_pred HHHHHHHHHHh------CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH---HHHhchHHHhhhhhh
Confidence 44555555666 789999999999999999999999999999999988765532110 000001111111110
Q ss_pred cccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHH
Q 021023 173 WKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLF 252 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 252 (318)
.+. -....+.....+...... ......+..+....-.+-.+++++||+||++|+.|++++...+-.+.
T Consensus 172 ~R~-----P~e~~Yg~e~f~~~wa~w-------vD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~ 239 (277)
T KOG2984|consen 172 GRQ-----PYEDHYGPETFRTQWAAW-------VDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIP 239 (277)
T ss_pred hcc-----hHHHhcCHHHHHHHHHHH-------HHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchh
Confidence 000 000011111111100000 00000000000111234567899999999999999999988876666
Q ss_pred HHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 253 KVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 253 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
... +.+++.+.|.++|.+++ .++++++..+.+||++
T Consensus 240 ~~~--~~a~~~~~peGkHn~hL----rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 240 VLK--SLAKVEIHPEGKHNFHL----RYAKEFNKLVLDFLKS 275 (277)
T ss_pred hhc--ccceEEEccCCCcceee----echHHHHHHHHHHHhc
Confidence 666 77899999999999999 6777899999999975
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.93 E-value=7.1e-25 Score=187.08 Aligned_cols=248 Identities=21% Similarity=0.208 Sum_probs=172.4
Q ss_pred CccceEEEeecCCeeEEEEeecCCCCCC---ceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCCCcCCCC---
Q 021023 9 IKYDEEFILNSRRVKLFTCSWIPQNQEP---KALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGKSAG--- 81 (318)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~---~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~--- 81 (318)
...+...+...||.+++++++.|.+..+ -|+||++||.+.....+ +....+.|+.+||.|+.+|+||.+.-..
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 4566777888899999999999986332 38999999997554432 3778889999999999999998654321
Q ss_pred CCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHH
Q 021023 82 LSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVIS 161 (318)
Q Consensus 82 ~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 161 (318)
......--....+|+.+.++++.+....+.++++++|+|+||++++.++.+.| .+++.+...+..........
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~------ 515 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGE------ 515 (620)
T ss_pred HhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccc------
Confidence 10000112234678888888777777778889999999999999999999988 68888777765543211100
Q ss_pred HHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCc
Q 021023 162 VLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDK 241 (318)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 241 (318)
.............. .. .. ....+. .........++++|+|+|||+.|.
T Consensus 516 -------------------------~~~~~~~~~~~~~~----~~-~~-~~~~~~-~~sp~~~~~~i~~P~LliHG~~D~ 563 (620)
T COG1506 516 -------------------------STEGLRFDPEENGG----GP-PE-DREKYE-DRSPIFYADNIKTPLLLIHGEEDD 563 (620)
T ss_pred -------------------------cchhhcCCHHHhCC----Cc-cc-ChHHHH-hcChhhhhcccCCCEEEEeecCCc
Confidence 00000000000000 00 00 001111 123335568899999999999999
Q ss_pred ccChHHHHHHHHHhcC--CCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhcc
Q 021023 242 VTDKAVSVQLFKVASS--SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT 298 (318)
Q Consensus 242 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 298 (318)
.||.+++.++.+.+.. ..++++++|+.+|.+.. .++...+.+.+.+|+.+++..
T Consensus 564 ~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 564 RVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred cCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHHHhcC
Confidence 9999999999998853 56799999999998877 356777999999999988754
No 58
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=1.6e-24 Score=156.55 Aligned_cols=219 Identities=16% Similarity=0.230 Sum_probs=160.6
Q ss_pred ceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChH
Q 021023 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFD 90 (318)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~ 90 (318)
+-....+..|..+....+.|.. ...+++++.||...+...- ..+...|..+ +++++.+|++|+|.|.+.+.. .
T Consensus 36 ~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlgq~-~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE----~ 109 (258)
T KOG1552|consen 36 EVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLGQM-VELFKELSIFLNCNVVSYDYSGYGRSSGKPSE----R 109 (258)
T ss_pred ceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchHHH-HHHHHHHhhcccceEEEEecccccccCCCccc----c
Confidence 3344566667677766666664 4568999999986554422 4444455442 799999999999999988654 2
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI 170 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (318)
...+|+.++.++++++.. +.++++|+|+|+|+..++.+|.+.| +.++||.+|.......+.+..
T Consensus 110 n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~------------- 173 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDT------------- 173 (258)
T ss_pred cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCc-------------
Confidence 667899999999965544 6789999999999999999999998 999999999876532111100
Q ss_pred CCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHH
Q 021023 171 PTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQ 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~ 250 (318)
... ..+.. ....+..+.+++|+|++||++|.+++.....+
T Consensus 174 ----------------------------------~~~--~~~d~----f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~ 213 (258)
T KOG1552|consen 174 ----------------------------------KTT--YCFDA----FPNIEKISKITCPVLIIHGTDDEVVDFSHGKA 213 (258)
T ss_pred ----------------------------------ceE--Eeecc----ccccCcceeccCCEEEEecccCceecccccHH
Confidence 000 00000 11135677889999999999999999999999
Q ss_pred HHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhcc
Q 021023 251 LFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT 298 (318)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 298 (318)
+++.++.+ .+-.++.|+||.-..-.| ++...+..|+....+.
T Consensus 214 Lye~~k~~-~epl~v~g~gH~~~~~~~-----~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 214 LYERCKEK-VEPLWVKGAGHNDIELYP-----EYIEHLRRFISSVLPS 255 (258)
T ss_pred HHHhcccc-CCCcEEecCCCcccccCH-----HHHHHHHHHHHHhccc
Confidence 99999643 588889999998776333 3888888998766544
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.92 E-value=8e-24 Score=149.04 Aligned_cols=145 Identities=27% Similarity=0.428 Sum_probs=116.4
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEE
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 118 (318)
+||++||++++...| ..+++.|+++||.|+.+|+|++|.+... .++.++++.+..... +..+++++|
T Consensus 1 ~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-QPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHHH-HHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHHHH-HHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 589999999998877 9999999999999999999999887321 244445544321111 678999999
Q ss_pred EchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhC
Q 021023 119 ESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRAN 198 (318)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (318)
||+||.+++.++.++ .+++++|++++...
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------------------
Confidence 999999999999988 67999999998311
Q ss_pred CCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCccc
Q 021023 199 PYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHG 271 (318)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 271 (318)
...+.+.+.|+++++|++|.+++.+..+++++.++ ...+++++++++|+
T Consensus 97 -----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 12334566799999999999999999999999996 56899999999995
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.92 E-value=3.1e-23 Score=155.14 Aligned_cols=280 Identities=14% Similarity=0.112 Sum_probs=170.4
Q ss_pred ccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccc-cchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCC
Q 021023 10 KYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECS-IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (318)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 88 (318)
......+.+.||..+......++....+|.||++||+.|+.. .|.+.+++.+.++||.++++++|||+.+.......++
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 345557778888777776666554466789999999877654 4568888999999999999999999998854443333
Q ss_pred hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhH-HHHHHHHhhCC-CCcCEEEEeCCCcccccccC---Cch------
Q 021023 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGG-AMVLLLHRKKP-DYFDGAVLVAPMCKIAENVK---PHP------ 157 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~---~~~------ 157 (318)
. .+.+|+..++++++ ......++..+|.|+|| +++..++.+-. -.+.+.+.++.+.+...... ..+
T Consensus 128 ~-G~t~D~~~~l~~l~--~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~ 204 (345)
T COG0429 128 S-GETEDIRFFLDWLK--ARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYS 204 (345)
T ss_pred c-cchhHHHHHHHHHH--HhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhH
Confidence 2 23489999999994 34578899999999999 55555554322 23566666666555421110 000
Q ss_pred --hHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEE
Q 021023 158 --LVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVL 235 (318)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii 235 (318)
....+.+............-........ ...+....-+.........+....++++.. +....+++|.+|+|||
T Consensus 205 r~l~~~L~~~~~~kl~~l~~~~p~~~~~~i---k~~~ti~eFD~~~Tap~~Gf~da~dYYr~a-Ss~~~L~~Ir~PtLii 280 (345)
T COG0429 205 RYLLRNLKRNAARKLKELEPSLPGTVLAAI---KRCRTIREFDDLLTAPLHGFADAEDYYRQA-SSLPLLPKIRKPTLII 280 (345)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCcHHHHHH---HhhchHHhccceeeecccCCCcHHHHHHhc-cccccccccccceEEE
Confidence 1111111111111111000000000000 000111111222222233444455555543 3446789999999999
Q ss_pred EeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchH-HHHHHHHHHHHHHhc
Q 021023 236 HGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQ-IVFRDILNWLDERVA 297 (318)
Q Consensus 236 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~-~~~~~i~~fl~~~~~ 297 (318)
++.+|++++++..-..... .++++.+..-+.+||..++.......+ -..+.+.+|++..+.
T Consensus 281 ~A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ecCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999998776555443 348899999999999999974322222 466788888886653
No 61
>PRK11071 esterase YqiA; Provisional
Probab=99.92 E-value=3.9e-23 Score=150.26 Aligned_cols=185 Identities=17% Similarity=0.120 Sum_probs=122.1
Q ss_pred eEEEEEccCCcccccchh-HHHHHHHhc--CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceE
Q 021023 38 ALIFICHGYAMECSIGMN-STAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~-~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 114 (318)
|+||++||++++...|.. .+.+.+.+. +|+|+++|+||++ ++.++++.++++.+ +.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~------~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH------GGDPL 63 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc------CCCCe
Confidence 579999999999998832 345666543 7999999999984 35677788888776 77899
Q ss_pred EEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHh
Q 021023 115 YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKE 194 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (318)
+++||||||.+++.+|.++|. .+|+++|...... .....+... ..... ..
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~---------~~~~~~~~~-~~~~~-~~---------------- 113 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPFE---------LLTDYLGEN-ENPYT-GQ---------------- 113 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHHH---------HHHHhcCCc-ccccC-CC----------------
Confidence 999999999999999999983 4688888655211 000000000 00000 00
Q ss_pred hhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccc
Q 021023 195 IRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLY 274 (318)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 274 (318)
.+ ... ......... .+. ..+. ..+|+++++|++|.++|++.+.++++.. +.++++|++|.+..
T Consensus 114 ------~~--~~~-~~~~~d~~~-~~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~~ggdH~f~~ 176 (190)
T PRK11071 114 ------QY--VLE-SRHIYDLKV-MQI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVEEGGNHAFVG 176 (190)
T ss_pred ------cE--EEc-HHHHHHHHh-cCC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEECCCCcchhh
Confidence 00 000 000000000 011 1122 5678899999999999999999988754 56788999998843
Q ss_pred cCCccchHHHHHHHHHHHH
Q 021023 275 GEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 275 ~~p~~~~~~~~~~i~~fl~ 293 (318)
.+++.+.+.+|+.
T Consensus 177 ------~~~~~~~i~~fl~ 189 (190)
T PRK11071 177 ------FERYFNQIVDFLG 189 (190)
T ss_pred ------HHHhHHHHHHHhc
Confidence 1568888999874
No 62
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.92 E-value=2.8e-23 Score=155.93 Aligned_cols=201 Identities=17% Similarity=0.181 Sum_probs=140.6
Q ss_pred EEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcC-CCCCCCC-C--------CChHhHHH
Q 021023 25 FTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGK-SAGLSGY-I--------DNFDDLVD 94 (318)
Q Consensus 25 ~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~~~~-~--------~~~~~~~~ 94 (318)
..++..|.++++.|.||++|++.+-.... +.+++.|+++||.|+++|+-+-.. ....... . ...+...+
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~~~-~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNPNI-RDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-HHH-HHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCchHH-HHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 45677787656789999999988877534 899999999999999999865443 1111000 0 01245577
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcc
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWK 174 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (318)
++.+.+++++++...+.++|.++|+|+||.+++.++.+. +.++++|...|....
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------- 134 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------- 134 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------
Confidence 888999999777666778999999999999999999887 569999988872111
Q ss_pred cCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHH
Q 021023 175 IIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKV 254 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 254 (318)
........++++|+++++|+.|+.++.+..+.+.+.
T Consensus 135 --------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~ 170 (218)
T PF01738_consen 135 --------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEA 170 (218)
T ss_dssp --------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHH
T ss_pred --------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHH
Confidence 112234566789999999999999999988888877
Q ss_pred hc--CCCceEEEecCCcccccccCCc----cchHHHHHHHHHHHHHHh
Q 021023 255 AS--SSDKTMKLYEGMWHGLLYGEPE----ENTQIVFRDILNWLDERV 296 (318)
Q Consensus 255 ~~--~~~~~~~~~~~~gH~~~~~~p~----~~~~~~~~~i~~fl~~~~ 296 (318)
+. +...++++|+|++|.+...... ...++.++.+.+||++++
T Consensus 171 l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 171 LKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 73 3568999999999999876543 356778888999987653
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.91 E-value=3.7e-23 Score=154.86 Aligned_cols=202 Identities=23% Similarity=0.300 Sum_probs=136.7
Q ss_pred hHHHHHHHhcCcEEEEecCCCCcCCCCC---CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHh
Q 021023 55 NSTAIRLANEGYACYGIDYQGHGKSAGL---SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
......|+++||.|+.+|+||.+..... ......-...++|+.++++++.++...+.++++++|+|+||.+++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 5667889999999999999998754311 1111123456899999999998877778899999999999999999999
Q ss_pred hCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhH
Q 021023 132 KKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTG 211 (318)
Q Consensus 132 ~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (318)
++|+++++++..+|..+.......... +. ............ .
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~~~---~~----------------------------~~~~~~~~~~~~----~--- 125 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTTDI---YT----------------------------KAEYLEYGDPWD----N--- 125 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHTCC---HH----------------------------HGHHHHHSSTTT----S---
T ss_pred ccceeeeeeeccceecchhcccccccc---cc----------------------------cccccccCccch----h---
Confidence 999999999999998766322110000 00 000000000000 0
Q ss_pred HHHhhhchhHHhhcCc--ccccEEEEEeCCCcccChHHHHHHHHHhcC--CCceEEEecCCcccccccCCccchHHHHHH
Q 021023 212 YELMRVSMDLENRLDE--VSIPFIVLHGEEDKVTDKAVSVQLFKVASS--SDKTMKLYEGMWHGLLYGEPEENTQIVFRD 287 (318)
Q Consensus 212 ~~~~~~~~~~~~~~~~--i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~ 287 (318)
...+.. ......+.+ +++|+|+++|++|..||++.+.++++.+.. ..++++++|++||.+.. .+...+..+.
T Consensus 126 ~~~~~~-~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~---~~~~~~~~~~ 201 (213)
T PF00326_consen 126 PEFYRE-LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN---PENRRDWYER 201 (213)
T ss_dssp HHHHHH-HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS---HHHHHHHHHH
T ss_pred hhhhhh-hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC---chhHHHHHHH
Confidence 000000 112233344 789999999999999999999999988854 45899999999996554 2445578999
Q ss_pred HHHHHHHHhcc
Q 021023 288 ILNWLDERVAT 298 (318)
Q Consensus 288 i~~fl~~~~~~ 298 (318)
+.+|++++++.
T Consensus 202 ~~~f~~~~l~~ 212 (213)
T PF00326_consen 202 ILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHTT-
T ss_pred HHHHHHHHcCC
Confidence 99999998753
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.91 E-value=1.9e-22 Score=151.74 Aligned_cols=185 Identities=16% Similarity=0.135 Sum_probs=129.0
Q ss_pred CCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCC----------CCCC---ChHhHHHHHHHHH
Q 021023 34 QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS----------GYID---NFDDLVDDCFNHF 100 (318)
Q Consensus 34 ~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~----------~~~~---~~~~~~~d~~~~l 100 (318)
.+++|+||++||++++...| ..+++.|...++.+..++.+|...+.... .... .+....+.+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 46778999999999999988 89999998776666666666653221100 0000 1223334455556
Q ss_pred HHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChh
Q 021023 101 TSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQD 180 (318)
Q Consensus 101 ~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (318)
+++..+...+.++++++|||+||.+++.++.++|+.+.+++.+++.....
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------------ 141 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------------ 141 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------------------
Confidence 66544444456789999999999999999999998778787765532100
Q ss_pred hhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC--C
Q 021023 181 IVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS--S 258 (318)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~ 258 (318)
......+.|++++||++|.++|.+.++++.+.+.. .
T Consensus 142 ------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 142 ------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred ------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 00011357999999999999999999998888753 3
Q ss_pred CceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhccC
Q 021023 259 DKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATG 299 (318)
Q Consensus 259 ~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~ 299 (318)
++++++++++||.+.. + ..+.+.+||.+.+...
T Consensus 180 ~~~~~~~~~~gH~i~~----~----~~~~~~~~l~~~l~~~ 212 (232)
T PRK11460 180 DVTLDIVEDLGHAIDP----R----LMQFALDRLRYTVPKR 212 (232)
T ss_pred CeEEEEECCCCCCCCH----H----HHHHHHHHHHHHcchh
Confidence 5688899999998865 2 5667777777666443
No 65
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=1.6e-22 Score=166.47 Aligned_cols=249 Identities=12% Similarity=0.098 Sum_probs=145.8
Q ss_pred eEEEEeecCCCC-CCceEEEEEccCCcccccch----hHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHH-HH
Q 021023 23 KLFTCSWIPQNQ-EPKALIFICHGYAMECSIGM----NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD-DC 96 (318)
Q Consensus 23 ~l~~~~~~p~~~-~~~~~iv~~hG~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-d~ 96 (318)
.+....|.|... ..+++||++||+......+- .+++++|.++||+|+++|++|+|.+.... ++++++. ++
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~i 248 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDGV 248 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHHH
Confidence 455555666632 35678999999986666551 38999999999999999999999886432 3445553 35
Q ss_pred HHHHHHHHhhhhccCceEEEEEEchhHHHHH----HHHhhC-CCCcCEEEEeCCCcccccccCCchhH-HHHHhhhhhcC
Q 021023 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVL----LLHRKK-PDYFDGAVLVAPMCKIAENVKPHPLV-ISVLTKLCKFI 170 (318)
Q Consensus 97 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 170 (318)
.+.++.++ ...+.++++++||||||.++. .+++.. +++|++++++++..++.......... ......+....
T Consensus 249 ~~al~~v~--~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~ 326 (532)
T TIGR01838 249 IAALEVVE--AITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQN 326 (532)
T ss_pred HHHHHHHH--HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHH
Confidence 55666553 222788999999999999852 245555 78899999999988875321110000 00010111111
Q ss_pred CCcccCCChhhhhh--hhcC-hhhhHh----hhhC-------CCCcCC---ccchhhHHHH----hhhc---------hh
Q 021023 171 PTWKIIPSQDIVDV--AFKL-PEKRKE----IRAN-------PYCYKG---RPRLKTGYEL----MRVS---------MD 220 (318)
Q Consensus 171 ~~~~~~~~~~~~~~--~~~~-~~~~~~----~~~~-------~~~~~~---~~~~~~~~~~----~~~~---------~~ 220 (318)
......+...+... .++. ...... +... ...+.. ........++ +... .+
T Consensus 327 ~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g 406 (532)
T TIGR01838 327 GGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCG 406 (532)
T ss_pred HhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECC
Confidence 11111111110000 0000 000000 0000 000000 0011111111 1110 11
Q ss_pred HHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCcc
Q 021023 221 LENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEE 279 (318)
Q Consensus 221 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 279 (318)
....+.+|++|+++++|++|.++|++.++.+.+.+ ++.+..+++++||..++++|..
T Consensus 407 ~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 407 VRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred EecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCCC
Confidence 23456788999999999999999999999988888 5678889999999999887753
No 66
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.90 E-value=4.4e-24 Score=162.64 Aligned_cols=205 Identities=20% Similarity=0.197 Sum_probs=126.0
Q ss_pred cEEEEecCCCCcCCCC---CCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEE
Q 021023 66 YACYGIDYQGHGKSAG---LSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVL 142 (318)
Q Consensus 66 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl 142 (318)
|+|+++|+||+|.|+. .....++.++.++++..+++.+ +.++++++||||||.+++.+|..+|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL------GIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH------TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 7899999999999995 4455578999999999999998 888899999999999999999999999999999
Q ss_pred eCCCc----ccccccCCc-hhHHHHHhhhhh-cCCCcccCCCh------hhhhhhhcChhhhHhhhhCCCCcCCccchhh
Q 021023 143 VAPMC----KIAENVKPH-PLVISVLTKLCK-FIPTWKIIPSQ------DIVDVAFKLPEKRKEIRANPYCYKGRPRLKT 210 (318)
Q Consensus 143 ~~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (318)
++++. ......... ............ ........... ............... ...............
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQ-SQQYARFAETDAFDN 153 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-HHHHHHTCHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccc-hhhhhHHHHHHHHhh
Confidence 99962 110000000 000000000000 00000000000 000000000000000 000000000000000
Q ss_pred ---HHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCcc
Q 021023 211 ---GYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEE 279 (318)
Q Consensus 211 ---~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 279 (318)
.........+....+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||..+.++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHH
T ss_pred hccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHh
Confidence 011112223445667889999999999999999999999988888 7899999999999999977754
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.90 E-value=1.6e-22 Score=153.10 Aligned_cols=129 Identities=20% Similarity=0.219 Sum_probs=103.9
Q ss_pred eecCCeeEEEEeecCCCCCCceEEEEEccCCcccccc---hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHH
Q 021023 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG---MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV 93 (318)
Q Consensus 17 ~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 93 (318)
.+.....+....+.|.+..++++||++||+++....+ +..+++.|+++||.|+++|+||||.|.+.... .+++.++
T Consensus 5 l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~~ 83 (266)
T TIGR03101 5 LDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVWK 83 (266)
T ss_pred ecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHHH
Confidence 3444445666667776545678999999998653322 26778999999999999999999999865443 4788899
Q ss_pred HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 94 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
+|+..+++++.+. +..+++++||||||.+++.++.++|++++++|+++|....
T Consensus 84 ~Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 84 EDVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 9999999988543 4679999999999999999999999999999999987654
No 68
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.90 E-value=3e-23 Score=150.40 Aligned_cols=258 Identities=15% Similarity=0.183 Sum_probs=153.1
Q ss_pred eecCCee--EEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHH
Q 021023 17 LNSRRVK--LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLV 93 (318)
Q Consensus 17 ~~~~g~~--l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 93 (318)
++.+|.. +..+..+|.. +..|+++++||+|.+.-.| ..++..+... ..+|+++|+||||.+........+.+.++
T Consensus 53 v~i~~~~~t~n~Y~t~~~~-t~gpil~l~HG~G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~ 130 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSA-TEGPILLLLHGGGSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMS 130 (343)
T ss_pred cccCCCcceEEEEEecCCC-CCccEEEEeecCcccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHH
Confidence 3444444 5555556653 6789999999999999888 9999998765 67889999999999987766667999999
Q ss_pred HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCC
Q 021023 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIP 171 (318)
Q Consensus 94 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (318)
.|+-++++++-. . ...+|+||||||||.+|...|.. -|. +.|++.++-.-...- ..+..+...+.. .|
T Consensus 131 KD~~~~i~~~fg--e-~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAm-----eAL~~m~~fL~~-rP 200 (343)
T KOG2564|consen 131 KDFGAVIKELFG--E-LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAM-----EALNSMQHFLRN-RP 200 (343)
T ss_pred HHHHHHHHHHhc--c-CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHH-----HHHHHHHHHHhc-CC
Confidence 999999998832 1 46689999999999999888754 455 888888875432210 000001111100 00
Q ss_pred CcccCCChhhhhhhhcChhhhH----------hhhhCC--CCcCCccchhhHHHHhhh-chhHHhhcCcccccEEEEEeC
Q 021023 172 TWKIIPSQDIVDVAFKLPEKRK----------EIRANP--YCYKGRPRLKTGYELMRV-SMDLENRLDEVSIPFIVLHGE 238 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~lii~G~ 238 (318)
.. +........+..+....+. .+.... -.+..+..+.....++.. ...+.+.+-...+|-++|.+.
T Consensus 201 ~~-F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg 279 (343)
T KOG2564|consen 201 KS-FKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAG 279 (343)
T ss_pred cc-ccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEec
Confidence 00 0111111111111110000 000000 011112222222222221 122333444557787777777
Q ss_pred CCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 239 EDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 239 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
.|..-..-..-+ +. ...++.+++.+||+.+.+.|.+ +...+..|+.++.
T Consensus 280 ~d~LDkdLtiGQ----MQ-Gk~Q~~vL~~~GH~v~ED~P~k----va~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 280 VDRLDKDLTIGQ----MQ-GKFQLQVLPLCGHFVHEDSPHK----VAECLCVFWIRNR 328 (343)
T ss_pred ccccCcceeeee----ec-cceeeeeecccCceeccCCcch----HHHHHHHHHhhhc
Confidence 665422111111 11 3458999999999999988876 8888899987765
No 69
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=2e-21 Score=150.96 Aligned_cols=284 Identities=14% Similarity=0.148 Sum_probs=170.8
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCCC------CCceEEEEEccCCccc-ccchhHHHHHHHhcCcEEEEecCCCCcC
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQNQ------EPKALIFICHGYAMEC-SIGMNSTAIRLANEGYACYGIDYQGHGK 78 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~------~~~~~iv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 78 (318)
...+.+++..+...||..+.+....+.+. ...|+||++||..+++ +.|.+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 34566778889999999999998866643 4679999999987654 4566888888889999999999999999
Q ss_pred CCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC---CcCEEEEeCCCccc--cccc
Q 021023 79 SAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVAPMCKI--AENV 153 (318)
Q Consensus 79 s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~--~~~~ 153 (318)
+.-.....++. .+.+|+.++++++ +..+...++..+|.||||++...+..+..+ .+.++++.+|+-.. ....
T Consensus 168 ~~LtTpr~f~a-g~t~Dl~~~v~~i--~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~ 244 (409)
T KOG1838|consen 168 SKLTTPRLFTA-GWTEDLREVVNHI--KKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSI 244 (409)
T ss_pred CccCCCceeec-CCHHHHHHHHHHH--HHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHH
Confidence 88554443333 4478999999999 555677899999999999999999876433 34444455554322 1111
Q ss_pred CC---chhHHHHHh-hhhhcCCCccc--CCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCc
Q 021023 154 KP---HPLVISVLT-KLCKFIPTWKI--IPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDE 227 (318)
Q Consensus 154 ~~---~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
.. .......+. .+......... .......+...+....++.-.... .....+....+++. ..+....+.+
T Consensus 245 ~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t---~~~~gf~~~deYY~-~aSs~~~v~~ 320 (409)
T KOG1838|consen 245 ETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALT---RPMFGFKSVDEYYK-KASSSNYVDK 320 (409)
T ss_pred hcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhh---hhhcCCCcHHHHHh-hcchhhhccc
Confidence 11 111111111 11111100000 000000000111111111111000 00112222233333 2345577899
Q ss_pred ccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHH-HHHHHHHHhc
Q 021023 228 VSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRD-ILNWLDERVA 297 (318)
Q Consensus 228 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~-i~~fl~~~~~ 297 (318)
|++|+|+|++.+|+++|.+.. ...+...++++-+.+-..+||..++|.-........+. +.+|+.....
T Consensus 321 I~VP~L~ina~DDPv~p~~~i-p~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEEAI-PIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred ccccEEEEecCCCCCCCcccC-CHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 999999999999999998632 22333344788888889999999997621122333444 7777766543
No 70
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.89 E-value=4.3e-21 Score=150.39 Aligned_cols=240 Identities=15% Similarity=0.120 Sum_probs=144.1
Q ss_pred CCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCC
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 87 (318)
..+.++..+.- +|.+|.+++..|..+++.|+||++.|+-+....++..+.+.|+.+|+.++++|.||.|.|...... .
T Consensus 162 ~~~i~~v~iP~-eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~ 239 (411)
T PF06500_consen 162 DYPIEEVEIPF-EGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-Q 239 (411)
T ss_dssp SSEEEEEEEEE-TTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S
T ss_pred CCCcEEEEEee-CCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-c
Confidence 34455555555 458899988999877888999999998888876645566778899999999999999998643221 1
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHH----HHH
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVI----SVL 163 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~----~~~ 163 (318)
+.+. -..++++++...++++..+|.++|.|+||++|.++|..++++++++|..++++...-. ...... .+.
T Consensus 240 D~~~---l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft--~~~~~~~~P~my~ 314 (411)
T PF06500_consen 240 DSSR---LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFT--DPEWQQRVPDMYL 314 (411)
T ss_dssp -CCH---HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH---HHHHTTS-HHHH
T ss_pred CHHH---HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhc--cHHHHhcCCHHHH
Confidence 2222 3456788888888889999999999999999999999998999999999998654210 000000 000
Q ss_pred hhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhH--Hhhc--CcccccEEEEEeCC
Q 021023 164 TKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDL--ENRL--DEVSIPFIVLHGEE 239 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~i~~P~lii~G~~ 239 (318)
..+...+. .. ..........+. ...+ ...+ .+.++|+|.+.|++
T Consensus 315 d~LA~rlG------------------------------~~-~~~~~~l~~el~-~~SLk~qGlL~~rr~~~plL~i~~~~ 362 (411)
T PF06500_consen 315 DVLASRLG------------------------------MA-AVSDESLRGELN-KFSLKTQGLLSGRRCPTPLLAINGED 362 (411)
T ss_dssp HHHHHHCT-------------------------------S-CE-HHHHHHHGG-GGSTTTTTTTTSS-BSS-EEEEEETT
T ss_pred HHHHHHhC------------------------------Cc-cCCHHHHHHHHH-hcCcchhccccCCCCCcceEEeecCC
Confidence 00000000 00 000000000000 0111 1233 66789999999999
Q ss_pred CcccChHHHHHHHHHhcCCCceEEEecCCc-ccccccCCccchHHHHHHHHHHHHHHh
Q 021023 240 DKVTDKAVSVQLFKVASSSDKTMKLYEGMW-HGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 240 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
|.++|.+..+-++..- .+.+...++... |..+. +....+.+||++.+
T Consensus 363 D~v~P~eD~~lia~~s--~~gk~~~~~~~~~~~gy~--------~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 363 DPVSPIEDSRLIAESS--TDGKALRIPSKPLHMGYP--------QALDEIYKWLEDKL 410 (411)
T ss_dssp -SSS-HHHHHHHHHTB--TT-EEEEE-SSSHHHHHH--------HHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhcC--CCCceeecCCCccccchH--------HHHHHHHHHHHHhc
Confidence 9999999887666554 456777777554 54333 47889999998764
No 71
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.89 E-value=5e-21 Score=149.21 Aligned_cols=246 Identities=17% Similarity=0.180 Sum_probs=155.0
Q ss_pred CCccceEEEeecCCeeEEEEeecCC-CCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcC-CCCC---
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQ-NQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGK-SAGL--- 82 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~-~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~--- 82 (318)
........+...+|..|+.+++.|. ..++.|.||.+||+++....+ .... .++..||.|+.+|.||.|. +...
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~-~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDP-FDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGH-HHHH-HHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCc-cccc-ccccCCeEEEEecCCCCCCCCCCcccc
Confidence 4556677888899999999999998 456789999999999987756 4433 4678899999999999993 2110
Q ss_pred -----C----------CCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 83 -----S----------GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 83 -----~----------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
. ...+-+..+..|+..+++.+++++.++.++|.+.|.|+||.+++.+|+..+ +|++++...|+.
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 0 001123345789999999999999999999999999999999999999886 599999998865
Q ss_pred ccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhh-hCCCCcCCccchhhHHHHhhhchhHHhhcC
Q 021023 148 KIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR-ANPYCYKGRPRLKTGYELMRVSMDLENRLD 226 (318)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
.-.... ...-.. ..+... ...... .+.. .......++. ....|.....+
T Consensus 210 ~d~~~~---------~~~~~~------~~~y~~----------~~~~~~~~d~~----~~~~~~v~~~-L~Y~D~~nfA~ 259 (320)
T PF05448_consen 210 CDFRRA---------LELRAD------EGPYPE----------IRRYFRWRDPH----HEREPEVFET-LSYFDAVNFAR 259 (320)
T ss_dssp SSHHHH---------HHHT--------STTTHH----------HHHHHHHHSCT----HCHHHHHHHH-HHTT-HHHHGG
T ss_pred cchhhh---------hhcCCc------cccHHH----------HHHHHhccCCC----cccHHHHHHH-HhhhhHHHHHH
Confidence 432110 000000 000000 000000 0000 0000111111 12356667788
Q ss_pred cccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHH-HHHHHHHHHHH
Q 021023 227 EVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIV-FRDILNWLDER 295 (318)
Q Consensus 227 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~-~~~i~~fl~~~ 295 (318)
+|++|+++-.|-.|.++|+......++.+.+ .+++.+++..||.... .. .+...+||.++
T Consensus 260 ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~~--------~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 260 RIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYGP--------EFQEDKQLNFLKEH 320 (320)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTTH--------HHHHHHHHHHHHH-
T ss_pred HcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCchh--------hHHHHHHHHHHhcC
Confidence 9999999999999999999999999999974 4899999999996654 24 67788888764
No 72
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.89 E-value=2.2e-21 Score=174.85 Aligned_cols=265 Identities=14% Similarity=0.189 Sum_probs=156.5
Q ss_pred eEEEEeecCCCC-----CCceEEEEEccCCcccccchhH-----HHHHHHhcCcEEEEecCCCCcCCCCCCC-CCCChHh
Q 021023 23 KLFTCSWIPQNQ-----EPKALIFICHGYAMECSIGMNS-----TAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDD 91 (318)
Q Consensus 23 ~l~~~~~~p~~~-----~~~~~iv~~hG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~ 91 (318)
.+..+.|.|... ..+++|||+||++.+...| +. +++.|.++||+|+++|+ |.++.+.. ...++.+
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~ 123 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLAD 123 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHH
Confidence 344555566531 3568899999999998888 54 48999999999999995 55553322 1246777
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhC-CCCcCEEEEeCCCcccccccCCchh--H-HHHHhh--
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK-PDYFDGAVLVAPMCKIAENVKPHPL--V-ISVLTK-- 165 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~--~-~~~~~~-- 165 (318)
++..+.+.++.++.. ..++++++||||||.+++.+++.+ +++|+++|+++++.++......... . ......
T Consensus 124 ~i~~l~~~l~~v~~~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 200 (994)
T PRK07868 124 HVVALSEAIDTVKDV---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMA 200 (994)
T ss_pred HHHHHHHHHHHHHHh---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccch
Confidence 776666666665322 346899999999999999988754 5689999999988765432110000 0 000000
Q ss_pred --hhh--cCCCcc-------cCCCh------hhhhhhhcChh------hhHhhhhCCC-CcCCccchhhHHHHhhh-ch-
Q 021023 166 --LCK--FIPTWK-------IIPSQ------DIVDVAFKLPE------KRKEIRANPY-CYKGRPRLKTGYELMRV-SM- 219 (318)
Q Consensus 166 --~~~--~~~~~~-------~~~~~------~~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~- 219 (318)
+.. ..+.+. ..+.. .+...+..... .+.......+ .+... ........+.. ..
T Consensus 201 ~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~-~~~~~~~~~~~~n~~ 279 (994)
T PRK07868 201 DHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGP-AISELLKQFIAHNRM 279 (994)
T ss_pred hhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchH-HHHHHHHHHHHhCcc
Confidence 000 000000 00000 00000000000 0011100000 00000 01111111110 00
Q ss_pred -----hH---HhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceE-EEecCCcccccccCCccchHHHHHHHHH
Q 021023 220 -----DL---ENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTM-KLYEGMWHGLLYGEPEENTQIVFRDILN 290 (318)
Q Consensus 220 -----~~---~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~~p~~~~~~~~~~i~~ 290 (318)
.. ...+.++++|+|+++|++|.++|++.++.+.+.+ ++.++ .+++++||+.++--. ...++++..+.+
T Consensus 280 ~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~g~-~a~~~~wp~i~~ 356 (994)
T PRK07868 280 MTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVVGS-RAAQQTWPTVAD 356 (994)
T ss_pred cCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeeech-hhhhhhChHHHH
Confidence 01 1246889999999999999999999999998888 67776 677999999887433 566789999999
Q ss_pred HHHHHhcc
Q 021023 291 WLDERVAT 298 (318)
Q Consensus 291 fl~~~~~~ 298 (318)
||.++...
T Consensus 357 wl~~~~~~ 364 (994)
T PRK07868 357 WVKWLEGD 364 (994)
T ss_pred HHHHhccC
Confidence 99988754
No 73
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=9.7e-21 Score=141.67 Aligned_cols=211 Identities=16% Similarity=0.166 Sum_probs=164.4
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCc-CCCCCC--C------
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG-KSAGLS--G------ 84 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G-~s~~~~--~------ 84 (318)
..+.. +|..+..++..|....+.|.||++|+..+-.... +.+++.|+..||.|+++|+-+.. .+.... .
T Consensus 5 v~~~~-~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i-~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~ 82 (236)
T COG0412 5 VTIPA-PDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHI-RDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG 82 (236)
T ss_pred eEeeC-CCceEeEEEecCCcCCCCCEEEEEecccCCchHH-HHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh
Confidence 33444 4478999999998766669999999999888856 99999999999999999998743 222111 0
Q ss_pred --CCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHH
Q 021023 85 --YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISV 162 (318)
Q Consensus 85 --~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (318)
...+..+...|+.+.+++|..+...+..+|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 83 ~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~----------- 150 (236)
T COG0412 83 LVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD----------- 150 (236)
T ss_pred hhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-----------
Confidence 01233677899999999998776667889999999999999999999987 5999988877653210
Q ss_pred HhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcc
Q 021023 163 LTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKV 242 (318)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~ 242 (318)
.....++++|+|+.+|+.|..
T Consensus 151 -----------------------------------------------------------~~~~~~~~~pvl~~~~~~D~~ 171 (236)
T COG0412 151 -----------------------------------------------------------TADAPKIKVPVLLHLAGEDPY 171 (236)
T ss_pred -----------------------------------------------------------ccccccccCcEEEEecccCCC
Confidence 011457889999999999999
Q ss_pred cChHHHHHHHHHhcCC--CceEEEecCCcccccccC-------CccchHHHHHHHHHHHHHHhc
Q 021023 243 TDKAVSVQLFKVASSS--DKTMKLYEGMWHGLLYGE-------PEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 243 ~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~-------p~~~~~~~~~~i~~fl~~~~~ 297 (318)
+|......+.+.+... .+++.+++++.|.++.+. .....+..++.+.+|+.+.+.
T Consensus 172 ~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 172 IPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999888888777544 678999999999998542 123467788999999988764
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.89 E-value=9.7e-22 Score=137.03 Aligned_cols=243 Identities=21% Similarity=0.311 Sum_probs=153.4
Q ss_pred ceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChH
Q 021023 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFD 90 (318)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 90 (318)
+...+....+.++..-.... +...++|++||+-++... ++..++..|.+.|+.++.+|++|.|.|.+...+ -...
T Consensus 11 ~~ivi~n~~ne~lvg~lh~t---gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~ 86 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGLLHET---GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYN 86 (269)
T ss_pred eEEEeccCCCchhhcceecc---CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Cccc
Confidence 34445555555555533322 456789999999988764 357788899899999999999999999977655 2556
Q ss_pred hHHHHHHHHHHHHHhhhhccCce--EEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhh
Q 021023 91 DLVDDCFNHFTSICEKEENKEKM--RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCK 168 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~--~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (318)
..++|+..+++++.. ..+ -+++|||-||.+++.+|.++++ ++-+|.+++-.+....... ......+.++..
T Consensus 87 ~eadDL~sV~q~~s~-----~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~e-Rlg~~~l~~ike 159 (269)
T KOG4667|consen 87 TEADDLHSVIQYFSN-----SNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINE-RLGEDYLERIKE 159 (269)
T ss_pred chHHHHHHHHHHhcc-----CceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhh-hhcccHHHHHHh
Confidence 667999999999932 223 3589999999999999999988 7777777766554221100 000000000000
Q ss_pred cCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcc--cccEEEEEeCCCcccChH
Q 021023 169 FIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEV--SIPFIVLHGEEDKVTDKA 246 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~lii~G~~D~~~~~~ 246 (318)
. ..+...+..-.....+.......+...+..+...+| +||||-+||..|.+||.+
T Consensus 160 -------------------~----Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve 216 (269)
T KOG4667|consen 160 -------------------Q----GFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVE 216 (269)
T ss_pred -------------------C----CceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeech
Confidence 0 000000000000000000011111112333333444 799999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 247 VSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.+.++++.+ ++.++.+++|+.|.+...+ .+.......|...+
T Consensus 217 ~AkefAk~i--~nH~L~iIEgADHnyt~~q-----~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 217 DAKEFAKII--PNHKLEIIEGADHNYTGHQ-----SQLVSLGLEFIKTR 258 (269)
T ss_pred hHHHHHHhc--cCCceEEecCCCcCccchh-----hhHhhhcceeEEee
Confidence 999999999 6789999999999988733 23555555554433
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.89 E-value=7.4e-21 Score=147.63 Aligned_cols=213 Identities=15% Similarity=0.194 Sum_probs=131.3
Q ss_pred EeecCCeeEEEEeecCCC--CCCceEEEEEccCCcccccch--hHHHHHHHhcCcEEEEecCCCCcCC-----CC-----
Q 021023 16 ILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGM--NSTAIRLANEGYACYGIDYQGHGKS-----AG----- 81 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~s-----~~----- 81 (318)
....-|..+.|.+|.|+. +++.|+|+++||++++...|. ..+...+...|+.|+.+|..++|.. ..
T Consensus 24 ~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~ 103 (283)
T PLN02442 24 FSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGV 103 (283)
T ss_pred eccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCC
Confidence 334567899999999973 256799999999998876552 2344566677999999998877621 10
Q ss_pred -CC----CCC-----CC-hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 82 -LS----GYI-----DN-FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 82 -~~----~~~-----~~-~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
.. ... .. .....+++...++... ...+.++++++||||||..|+.++.++|+++++++.++|..+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 104 GAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPI 181 (283)
T ss_pred CcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcc
Confidence 00 000 01 1113344444444431 12367889999999999999999999999999999999886532
Q ss_pred cccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccc
Q 021023 151 ENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSI 230 (318)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 230 (318)
.. ....... .. .+.... . ..... ........+...++
T Consensus 182 ~~---~~~~~~~----~~----------------~~g~~~--~-----------------~~~~~-d~~~~~~~~~~~~~ 218 (283)
T PLN02442 182 NC---PWGQKAF----TN----------------YLGSDK--A-----------------DWEEY-DATELVSKFNDVSA 218 (283)
T ss_pred cC---chhhHHH----HH----------------HcCCCh--h-----------------hHHHc-ChhhhhhhccccCC
Confidence 10 0000000 00 000000 0 00000 00122233445688
Q ss_pred cEEEEEeCCCcccChH-HHHHHHHHhcC--CCceEEEecCCccccc
Q 021023 231 PFIVLHGEEDKVTDKA-VSVQLFKVASS--SDKTMKLYEGMWHGLL 273 (318)
Q Consensus 231 P~lii~G~~D~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 273 (318)
|+++++|++|.+++.. .++.+.+.+.. .+++++++++.+|.+.
T Consensus 219 pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 219 TILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 9999999999998863 34455444422 4578999999999765
No 76
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.89 E-value=1.4e-20 Score=145.96 Aligned_cols=225 Identities=17% Similarity=0.187 Sum_probs=135.6
Q ss_pred ecCCeeEEEEeecCCC--CCCceEEEEEccCCcccccchh-HHHHHH-HhcCcEEEEecC--CCCcCCCCCC--------
Q 021023 18 NSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMN-STAIRL-ANEGYACYGIDY--QGHGKSAGLS-------- 83 (318)
Q Consensus 18 ~~~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~~-~~~~~l-~~~g~~v~~~d~--~G~G~s~~~~-------- 83 (318)
..-+..+.|.+|.|+. .++.|+|+++||++++...|.. .....+ .+.|+.|+++|. +|+|.+....
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 3457788999999974 3567999999999998886721 123344 456999999998 5555332100
Q ss_pred -----------CCCCChHh-HHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccccc
Q 021023 84 -----------GYIDNFDD-LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 84 -----------~~~~~~~~-~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (318)
...+.... .++++..+++.. ...+.++++++||||||.+++.++.++|+.++++++++|......
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~ 177 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQ---FPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSR 177 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhh---CCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCccc
Confidence 00112222 245555555442 123567899999999999999999999999999999998865321
Q ss_pred ccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccccc
Q 021023 152 NVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIP 231 (318)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 231 (318)
.... .. .....+.. +...+ .. .. ........ ....|
T Consensus 178 ---~~~~-~~-------------------~~~~~l~~---------~~~~~------~~-~~----~~~~~~~~-~~~~p 213 (275)
T TIGR02821 178 ---CPWG-QK-------------------AFSAYLGA---------DEAAW------RS-YD----ASLLVADG-GRHST 213 (275)
T ss_pred ---Ccch-HH-------------------HHHHHhcc---------cccch------hh-cc----hHHHHhhc-ccCCC
Confidence 0000 00 00000000 00000 00 00 00111111 24579
Q ss_pred EEEEEeCCCcccCh-HHHHHHHHHhcC--CCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 232 FIVLHGEEDKVTDK-AVSVQLFKVASS--SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 232 ~lii~G~~D~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
+++.+|+.|..++. .....+.+.+.. ..+++.+++|.+|.+.. .........+|..++
T Consensus 214 lli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 214 ILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred eeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhh
Confidence 99999999999998 455555555533 34788999999998876 122455555555543
No 77
>PLN00021 chlorophyllase
Probab=99.88 E-value=9.4e-21 Score=147.55 Aligned_cols=210 Identities=13% Similarity=0.156 Sum_probs=142.4
Q ss_pred eeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHH
Q 021023 22 VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT 101 (318)
Q Consensus 22 ~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 101 (318)
..+.+.++.|...+..|+|||+||++.+...| ..+++.|+++||.|+++|++|++.+.. ... .++..++++
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y-~~l~~~Las~G~~VvapD~~g~~~~~~----~~~----i~d~~~~~~ 107 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSFY-SQLLQHIASHGFIVVAPQLYTLAGPDG----TDE----IKDAAAVIN 107 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCcccH-HHHHHHHHhCCCEEEEecCCCcCCCCc----hhh----HHHHHHHHH
Confidence 46778888887667789999999999988866 999999999999999999998643211 012 233444444
Q ss_pred HHHhh--------hhccCceEEEEEEchhHHHHHHHHhhCCC-----CcCEEEEeCCCcccccccCCchhHHHHHhhhhh
Q 021023 102 SICEK--------EENKEKMRYLLGESMGGAMVLLLHRKKPD-----YFDGAVLVAPMCKIAENVKPHPLVISVLTKLCK 168 (318)
Q Consensus 102 ~l~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (318)
++.+. ...+.++++++|||+||.+++.+|..+++ +++++|+++|...........+
T Consensus 108 ~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p----------- 176 (313)
T PLN00021 108 WLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPP----------- 176 (313)
T ss_pred HHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCC-----------
Confidence 44321 11345789999999999999999998874 5889999988764421000000
Q ss_pred cCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCc-----cc
Q 021023 169 FIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDK-----VT 243 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~-----~~ 243 (318)
.. ........++.+|+|++.+..|. .+
T Consensus 177 --------------------------------------~i----------l~~~~~s~~~~~P~liig~g~~~~~~~~~~ 208 (313)
T PLN00021 177 --------------------------------------PV----------LTYAPHSFNLDIPVLVIGTGLGGEPRNPLF 208 (313)
T ss_pred --------------------------------------cc----------cccCcccccCCCCeEEEecCCCcccccccc
Confidence 00 00001112367999999999663 22
Q ss_pred ----ChH-HHHHHHHHhcCCCceEEEecCCcccccccCC-------------------ccchHHHHHHHHHHHHHHhccC
Q 021023 244 ----DKA-VSVQLFKVASSSDKTMKLYEGMWHGLLYGEP-------------------EENTQIVFRDILNWLDERVATG 299 (318)
Q Consensus 244 ----~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-------------------~~~~~~~~~~i~~fl~~~~~~~ 299 (318)
|.. ...++++.++ +.+.+.+++++||+-+++.. +..++.+...+..||...+...
T Consensus 209 p~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 209 PPCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred cccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 233 3467777776 46788899999999887654 1234556667889998888665
Q ss_pred C
Q 021023 300 N 300 (318)
Q Consensus 300 ~ 300 (318)
.
T Consensus 288 ~ 288 (313)
T PLN00021 288 T 288 (313)
T ss_pred h
Confidence 4
No 78
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=5.1e-20 Score=143.70 Aligned_cols=253 Identities=21% Similarity=0.232 Sum_probs=143.3
Q ss_pred cCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhc--CcEEEEecCCCCcCCCCCCCCCCChHhHHHHH
Q 021023 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 96 (318)
..+..+.|...+.. .|+++++||++++...| ......+... .|+++.+|+||||.|. .. .......++++
T Consensus 7 ~~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~ 78 (282)
T COG0596 7 ADGVRLAYREAGGG----GPPLVLLHGFPGSSSVW-RPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDL 78 (282)
T ss_pred CCCeEEEEeecCCC----CCeEEEeCCCCCchhhh-HHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHH
Confidence 34555666655433 44899999999998878 4432333232 1899999999999997 11 23555558899
Q ss_pred HHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCc------hhHHHHHhhhhhc-
Q 021023 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPH------PLVISVLTKLCKF- 169 (318)
Q Consensus 97 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~------~~~~~~~~~~~~~- 169 (318)
..+++.+ +..+++++|||+||.+++.++.++|++++++|++++........... .............
T Consensus 79 ~~~~~~~------~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T COG0596 79 AALLDAL------GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD 152 (282)
T ss_pred HHHHHHh------CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc
Confidence 9999888 66779999999999999999999999999999999875411100000 0000000000000
Q ss_pred ----CCCcccCC-Chhhhh-----hhhcCh-hhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeC
Q 021023 170 ----IPTWKIIP-SQDIVD-----VAFKLP-EKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGE 238 (318)
Q Consensus 170 ----~~~~~~~~-~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 238 (318)
........ ...... ...... .............. ............. .........+++|+++++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 153 AAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAA-RADLAAALLALLD-RDLRAALARITVPTLIIHGE 230 (282)
T ss_pred hhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhc-ccccchhhhcccc-cccchhhccCCCCeEEEecC
Confidence 00000000 000000 000000 00000000000000 0000000000000 02234456778999999999
Q ss_pred CCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 239 EDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 239 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
+|.+.|......+.+.+.. ..++.+++++||..+.++|+. +.+.+.+|+
T Consensus 231 ~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~----~~~~i~~~~ 279 (282)
T COG0596 231 DDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEA----FAAALLAFL 279 (282)
T ss_pred CCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHH----HHHHHHHHH
Confidence 9977776665566666622 479999999999999988763 666666643
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.86 E-value=1.8e-20 Score=139.82 Aligned_cols=122 Identities=18% Similarity=0.223 Sum_probs=89.2
Q ss_pred EeecCCC-CCCceEEEEEccCCcccccch--hHHHHHHHhcCcEEEEecCCCCcCCCCCCCCC-----CChHhHHHHHHH
Q 021023 27 CSWIPQN-QEPKALIFICHGYAMECSIGM--NSTAIRLANEGYACYGIDYQGHGKSAGLSGYI-----DNFDDLVDDCFN 98 (318)
Q Consensus 27 ~~~~p~~-~~~~~~iv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~~ 98 (318)
++|.|.+ .++.|+||++||.+++...+. ..+...+.+.||.|+++|++|++.+....... ........++..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 5667764 356899999999998766551 13555555679999999999987543211100 011234667888
Q ss_pred HHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 99 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
+++++.++...+.++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 82 ~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 82 LIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 88888665555667999999999999999999999999999988887653
No 80
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.86 E-value=1.8e-20 Score=158.81 Aligned_cols=132 Identities=17% Similarity=0.134 Sum_probs=109.0
Q ss_pred eecCCeeEEEEeecCCCCCCceEEEEEccCCcccc---cchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHH
Q 021023 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECS---IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV 93 (318)
Q Consensus 17 ~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 93 (318)
...||.+|++.++.|.+.++.|+||++||++.+.. .+.......|+++||.|+++|+||+|.|.+.... .+ ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccc
Confidence 45689999999999976567899999999997653 2223456788899999999999999999876543 23 5678
Q ss_pred HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccccc
Q 021023 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 94 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (318)
+|+.++++++..+.. ...+++++|+|+||.+++.+|..+|+.++++|..++..+...
T Consensus 80 ~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 80 ADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred hHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 999999999976654 346999999999999999999999999999999998876653
No 81
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.86 E-value=8.2e-20 Score=125.50 Aligned_cols=186 Identities=18% Similarity=0.260 Sum_probs=136.5
Q ss_pred eEEEEeecCCCCCCceEEEEEccCC---ccccc-chhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHH
Q 021023 23 KLFTCSWIPQNQEPKALIFICHGYA---MECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFN 98 (318)
Q Consensus 23 ~l~~~~~~p~~~~~~~~iv~~hG~~---~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 98 (318)
++.... .|.+.++.|+.|++|.-+ ++... -...++..|.++||.++.+|+||.|.|.+.... .+ ...+|..+
T Consensus 15 ~le~~~-~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--Gi-GE~~Da~a 90 (210)
T COG2945 15 RLEGRY-EPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GI-GELEDAAA 90 (210)
T ss_pred cceecc-CCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--Cc-chHHHHHH
Confidence 555543 344457788999999743 22221 126788889999999999999999999987654 22 23789999
Q ss_pred HHHHHHhhhhccCce-EEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCC
Q 021023 99 HFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIP 177 (318)
Q Consensus 99 ~l~~l~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (318)
+++|++++. ...+ ..+.|+|+|+++++.+|.+.|+ ....+.+.|....+
T Consensus 91 aldW~~~~h--p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~--------------------------- 140 (210)
T COG2945 91 ALDWLQARH--PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY--------------------------- 140 (210)
T ss_pred HHHHHHhhC--CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch---------------------------
Confidence 999995542 3333 3689999999999999999987 56666666554320
Q ss_pred ChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC
Q 021023 178 SQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS 257 (318)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 257 (318)
+. ..+....+|.++|+|+.|.+++.....++++..
T Consensus 141 ------------------------------------------df-s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~-- 175 (210)
T COG2945 141 ------------------------------------------DF-SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI-- 175 (210)
T ss_pred ------------------------------------------hh-hhccCCCCCceeEecChhhhhcHHHHHHhhcCC--
Confidence 00 223445689999999999999998887776653
Q ss_pred CCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 258 SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 258 ~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
..+++++++++|+++- ....+.+.+.+|+.
T Consensus 176 -~~~~i~i~~a~HFF~g-----Kl~~l~~~i~~~l~ 205 (210)
T COG2945 176 -KITVITIPGADHFFHG-----KLIELRDTIADFLE 205 (210)
T ss_pred -CCceEEecCCCceecc-----cHHHHHHHHHHHhh
Confidence 5689999999999987 34458888888885
No 82
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.85 E-value=5.7e-19 Score=129.74 Aligned_cols=220 Identities=15% Similarity=0.179 Sum_probs=141.1
Q ss_pred EEeecCCeeEEE----EeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChH
Q 021023 15 FILNSRRVKLFT----CSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFD 90 (318)
Q Consensus 15 ~~~~~~g~~l~~----~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 90 (318)
.+...+|..+.. ....|.+ .+..+||-+||.+++...| ..+.+.|.+.|.+++.+++||+|.+.+.....++-.
T Consensus 10 k~~~~~~~~~~~~a~y~D~~~~g-s~~gTVv~~hGsPGSH~DF-kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~ 87 (297)
T PF06342_consen 10 KFQAENGKIVTVQAVYEDSLPSG-SPLGTVVAFHGSPGSHNDF-KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNE 87 (297)
T ss_pred EcccccCceEEEEEEEEecCCCC-CCceeEEEecCCCCCccch-hhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChH
Confidence 344445544443 3334443 6677999999999999988 999999999999999999999999998888878989
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI 170 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (318)
+-..-+.++++.+. -.++++.+|||.||-.|+.++..+| ..++++++|+.........+.........+...+
T Consensus 88 er~~~~~~ll~~l~-----i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~l 160 (297)
T PF06342_consen 88 ERQNFVNALLDELG-----IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLL 160 (297)
T ss_pred HHHHHHHHHHHHcC-----CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHh
Confidence 98999999999882 1357899999999999999999996 6799999987654322222211222222222222
Q ss_pred CCcccCCChhhhhhhhcChhhhHhhhhCCCCcC-CccchhhHHHH----hhhchhHHhhcCcccccEEEEEeCCCcccCh
Q 021023 171 PTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYK-GRPRLKTGYEL----MRVSMDLENRLDEVSIPFIVLHGEEDKVTDK 245 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~ 245 (318)
+... .+.. ....+..--.... ........... +.......+.+.+-++|+++++|.+|.++..
T Consensus 161 p~~~-------~~~i-----~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEe 228 (297)
T PF06342_consen 161 PRFI-------INAI-----MYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEE 228 (297)
T ss_pred hHHH-------HHHH-----HHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHH
Confidence 2210 0000 0000000000000 00001111000 1111233445566679999999999999988
Q ss_pred HHHHHHHHHh
Q 021023 246 AVSVQLFKVA 255 (318)
Q Consensus 246 ~~~~~~~~~~ 255 (318)
+.+.+++..+
T Consensus 229 eI~~E~a~~f 238 (297)
T PF06342_consen 229 EISFEFAMKF 238 (297)
T ss_pred HHHHHHHHHh
Confidence 8887776655
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.85 E-value=1e-19 Score=136.13 Aligned_cols=185 Identities=18% Similarity=0.188 Sum_probs=113.2
Q ss_pred CCCceEEEEEccCCcccccchhHHHH-HHHhcCcEEEEecCCC------CcC---CCCC---CCC-----CCChHhHHHH
Q 021023 34 QEPKALIFICHGYAMECSIGMNSTAI-RLANEGYACYGIDYQG------HGK---SAGL---SGY-----IDNFDDLVDD 95 (318)
Q Consensus 34 ~~~~~~iv~~hG~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~~---~~~-----~~~~~~~~~d 95 (318)
++.+++||++||+|++...+ ..+.. .+......++.++-|. .|. +-.. ... ...+...++.
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 47789999999999998654 44444 2222357777776542 122 1100 000 0122333445
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCccc
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKI 175 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (318)
+.++|+...+ ...+.++++++|+|+||++++.++.++|+.+.++|.+++........
T Consensus 90 l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~---------------------- 146 (216)
T PF02230_consen 90 LDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL---------------------- 146 (216)
T ss_dssp HHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC----------------------
T ss_pred HHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc----------------------
Confidence 5566665432 23577899999999999999999999999999999999876432100
Q ss_pred CCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHh
Q 021023 176 IPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVA 255 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 255 (318)
........ ++|++++||.+|+++|.+.++...+.+
T Consensus 147 -------------------------------------------~~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L 181 (216)
T PF02230_consen 147 -------------------------------------------EDRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFL 181 (216)
T ss_dssp -------------------------------------------HCCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccC--CCcEEEEecCCCCcccHHHHHHHHHHH
Confidence 00001111 689999999999999999988888887
Q ss_pred cC--CCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 256 SS--SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 256 ~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
.. .+++++.+++.||.... +..+.+.+||+++
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~~--------~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEISP--------EELRDLREFLEKH 215 (216)
T ss_dssp HCTT-GEEEEEETT-SSS--H--------HHHHHHHHHHHHH
T ss_pred HhcCCCEEEEEcCCCCCCCCH--------HHHHHHHHHHhhh
Confidence 54 35799999999997765 3788899999875
No 84
>PRK10115 protease 2; Provisional
Probab=99.84 E-value=8.6e-19 Score=150.92 Aligned_cols=255 Identities=14% Similarity=0.180 Sum_probs=165.8
Q ss_pred CCccceEEEeecCCeeEEEEe-ecCC--CCCCceEEEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCCCCC-
Q 021023 8 NIKYDEEFILNSRRVKLFTCS-WIPQ--NQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGL- 82 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~-~~p~--~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~- 82 (318)
.+..+...+.+.||.+|.+.+ +.|. ..++.|+||++||..+.... .|......|+++||.|+.++.||-|.-...
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 456677788899999999854 4443 13567999999997766532 136666788899999999999997654421
Q ss_pred --CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHH
Q 021023 83 --SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVI 160 (318)
Q Consensus 83 --~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 160 (318)
......-....+|+.+.++++.++...+..++.+.|.|.||+++..++.++|++++++|+..|..+....+....
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~--- 569 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDES--- 569 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCC---
Confidence 100001113467888888998877777889999999999999999999999999999999999988643211000
Q ss_pred HHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccccc-EEEEEeCC
Q 021023 161 SVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIP-FIVLHGEE 239 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~G~~ 239 (318)
.+.. ..... .+. .+.-......+.. .+....+.+++.| +|+++|.+
T Consensus 570 ---------~p~~-----~~~~~-e~G-----------------~p~~~~~~~~l~~-~SP~~~v~~~~~P~lLi~~g~~ 616 (686)
T PRK10115 570 ---------IPLT-----TGEFE-EWG-----------------NPQDPQYYEYMKS-YSPYDNVTAQAYPHLLVTTGLH 616 (686)
T ss_pred ---------CCCC-----hhHHH-HhC-----------------CCCCHHHHHHHHH-cCchhccCccCCCceeEEecCC
Confidence 0000 00000 000 0000111111111 2333455677889 56779999
Q ss_pred CcccChHHHHHHHHHhcC--CCceEEEe---cCCcccccccCCccchHHHHHHHHHHHHHHhccCC
Q 021023 240 DKVTDKAVSVQLFKVASS--SDKTMKLY---EGMWHGLLYGEPEENTQIVFRDILNWLDERVATGN 300 (318)
Q Consensus 240 D~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~ 300 (318)
|..||+.++.++..++.. ...+++++ ++.||.... +....-+-......|+-..+....
T Consensus 617 D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~--~r~~~~~~~A~~~aFl~~~~~~~~ 680 (686)
T PRK10115 617 DSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKS--GRFKSYEGVAMEYAFLIALAQGTL 680 (686)
T ss_pred CCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCc--CHHHHHHHHHHHHHHHHHHhCCcC
Confidence 999999999999988854 34567777 899998332 111222233445677777665543
No 85
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.83 E-value=1.2e-17 Score=119.38 Aligned_cols=231 Identities=14% Similarity=0.096 Sum_probs=129.5
Q ss_pred ceEEEeecCCeeEEEEeecCCCC--CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC-cCCCCCCCCCCC
Q 021023 12 DEEFILNSRRVKLFTCSWIPQNQ--EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH-GKSAGLSGYIDN 88 (318)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~p~~~--~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~ 88 (318)
.++.+...+|..|+.+...|... ..+++||+..|++.....+ ..++.+|+..||+|+.+|--.| |.|++.... ++
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ft 80 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FT 80 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG-HHHHHHHHTTT--EEEE---B--------------
T ss_pred ccceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH-HHHHHHHhhCCeEEEeccccccccCCCCChhh-cc
Confidence 34567778999999999988863 3458999999999999988 9999999999999999999876 888877655 68
Q ss_pred hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhh
Q 021023 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCK 168 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (318)
+....+++..+++|+..+ +..++.|+.-|+.|-+|+..|.+- .+..+|..-+....... +.+....-.-
T Consensus 81 ms~g~~sL~~V~dwl~~~---g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~T------Le~al~~Dyl 149 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATR---GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDT------LEKALGYDYL 149 (294)
T ss_dssp HHHHHHHHHHHHHHHHHT---T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHH------HHHHHSS-GG
T ss_pred hHHhHHHHHHHHHHHHhc---CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHH------HHHHhccchh
Confidence 999999999999999643 778899999999999999999954 38888888777665211 1111100000
Q ss_pred cCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHh----hhchhHHhhcCcccccEEEEEeCCCcccC
Q 021023 169 FIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELM----RVSMDLENRLDEVSIPFIVLHGEEDKVTD 244 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~P~lii~G~~D~~~~ 244 (318)
..+.........+....+ ..-....... .........++.+.+|++.+++++|.+|.
T Consensus 150 ~~~i~~lp~dldfeGh~l-------------------~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~ 210 (294)
T PF02273_consen 150 QLPIEQLPEDLDFEGHNL-------------------GAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVK 210 (294)
T ss_dssp GS-GGG--SEEEETTEEE-------------------EHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-
T ss_pred hcchhhCCCccccccccc-------------------chHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCcccc
Confidence 000000000000000000 0000001111 11123445678889999999999999999
Q ss_pred hHHHHHHHHHhcCCCceEEEecCCcccccc
Q 021023 245 KAVSVQLFKVASSSDKTMKLYEGMWHGLLY 274 (318)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 274 (318)
.....++...+.+...+++.++|+.|.+..
T Consensus 211 q~eV~~~~~~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 211 QSEVEELLDNINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp HHHHHHHHTT-TT--EEEEEETT-SS-TTS
T ss_pred HHHHHHHHHhcCCCceeEEEecCccchhhh
Confidence 999999999888788899999999998765
No 86
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.82 E-value=1.1e-18 Score=135.16 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=99.8
Q ss_pred CCeeEEEEeecC--CCCCCceEEEEEccCCcccccchh---------HHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCC
Q 021023 20 RRVKLFTCSWIP--QNQEPKALIFICHGYAMECSIGMN---------STAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (318)
Q Consensus 20 ~g~~l~~~~~~p--~~~~~~~~iv~~hG~~~~~~~~~~---------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 88 (318)
||++|.+.+|.| ...++.|+||..|+++........ .....|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 799999999999 666888999999999965311101 1112388999999999999999999876542
Q ss_pred hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccccc
Q 021023 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (318)
..+..+|..++|+++..+++ ...+|.++|.|++|..++.+|...|..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPW-SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCC-CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 67779999999999988855 567999999999999999999988889999999988877765
No 87
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.82 E-value=7.8e-18 Score=123.56 Aligned_cols=267 Identities=13% Similarity=0.074 Sum_probs=178.3
Q ss_pred cceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccch-----hHHHHHHHhcCcEEEEecCCCCcCCC--CCC
Q 021023 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGM-----NSTAIRLANEGYACYGIDYQGHGKSA--GLS 83 (318)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~--~~~ 83 (318)
.+++.+.+..| .+++.+++..+ +++|+||-.|..+.+....| .+-+..+.++ |.++-+|.||+-.-. -+.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~-~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPK-GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCC-CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC
Confidence 46667777665 88999998876 37888999999998876522 2334556676 999999999985443 222
Q ss_pred C-CCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHH
Q 021023 84 G-YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISV 162 (318)
Q Consensus 84 ~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (318)
+ ...+.+++++++..+++++ +.+.++-+|.-.|+++..++|..+|++|-++||+++.+....+. .|...++
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f------~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi--ew~~~K~ 170 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHF------GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI--EWAYNKV 170 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhc------CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH--HHHHHHH
Confidence 2 2468999999999999999 89999999999999999999999999999999999877653321 2222222
Q ss_pred HhhhhhcCCCcccCCChhhhhhhhc------ChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCc----ccccE
Q 021023 163 LTKLCKFIPTWKIIPSQDIVDVAFK------LPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDE----VSIPF 232 (318)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P~ 232 (318)
...+........ ...+-++...+. +......++.......+...+......+..+.|+...... ++||+
T Consensus 171 ~s~~l~~~Gmt~-~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~v 249 (326)
T KOG2931|consen 171 SSNLLYYYGMTQ-GVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPV 249 (326)
T ss_pred HHHHHHhhchhh-hHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccE
Confidence 211110000000 000011111111 2222233333333333344555555556556665544444 45999
Q ss_pred EEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 233 IVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 233 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
|++.|+..+.+ +.+.+...++...+..+..+.++|-.+..++|.. +.+.+.=|++..
T Consensus 250 llvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k----l~ea~~~FlqG~ 306 (326)
T KOG2931|consen 250 LLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK----LAEAFKYFLQGM 306 (326)
T ss_pred EEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchH----HHHHHHHHHccC
Confidence 99999998875 4555666777656788999999999999988875 888888888643
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=4.3e-17 Score=128.88 Aligned_cols=245 Identities=17% Similarity=0.181 Sum_probs=147.2
Q ss_pred cceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCC---cccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCC
Q 021023 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYA---MECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYI 86 (318)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~---~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~ 86 (318)
.++..+...+| .+..++|.|.. ...|+||++||++ ++...+ ..+++.|+.. |+.|+.+|+|.....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~vdYrlape~------- 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP-DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIGIDYTLSPEA------- 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC-CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEEecCCCCCCC-------
Confidence 44455555555 68889998864 4578999999987 444555 7788888874 999999999965432
Q ss_pred CChHhHHHHHHHHHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhhC------CCCcCEEEEeCCCcccccccCCch
Q 021023 87 DNFDDLVDDCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRKK------PDYFDGAVLVAPMCKIAENVKPHP 157 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~ 157 (318)
.+....+|+.++++++.++. ..+.++++|+|+|+||.+++.++.+. +.++.+++++.|..+.... .
T Consensus 127 -~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~----~ 201 (318)
T PRK10162 127 -RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS----V 201 (318)
T ss_pred -CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC----h
Confidence 22334677777777774432 23457999999999999999988642 3578999999987764210 0
Q ss_pred hHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEe
Q 021023 158 LVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHG 237 (318)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 237 (318)
... .. ...+..... .....+ ...+..+..... .+.. ......+.+.-.|+++++|
T Consensus 202 s~~----~~---~~~~~~l~~-~~~~~~------~~~y~~~~~~~~-~p~~----------~p~~~~l~~~lPp~~i~~g 256 (318)
T PRK10162 202 SRR----LL---GGVWDGLTQ-QDLQMY------EEAYLSNDADRE-SPYY----------CLFNNDLTRDVPPCFIAGA 256 (318)
T ss_pred hHH----Hh---CCCccccCH-HHHHHH------HHHhCCCccccC-Cccc----------CcchhhhhcCCCCeEEEec
Confidence 000 00 000000000 000000 000000000000 0000 0000112122359999999
Q ss_pred CCCcccChHHHHHHHHHhcC--CCceEEEecCCcccccccCC-ccchHHHHHHHHHHHHHHhc
Q 021023 238 EEDKVTDKAVSVQLFKVASS--SDKTMKLYEGMWHGLLYGEP-EENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 238 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p-~~~~~~~~~~i~~fl~~~~~ 297 (318)
+.|.+.+ ..+.+.+++.. ..+++++++|..|.+..-.+ .+..++..+.+.+||.+.+.
T Consensus 257 ~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 257 EFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 9999874 45566666643 45799999999998765322 23456788888899987653
No 89
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=1e-18 Score=133.42 Aligned_cols=261 Identities=17% Similarity=0.182 Sum_probs=157.2
Q ss_pred CCeeEEEEeecCCCCCCceEEEEEccCCccccc----------chhHHHH---HHHhcCcEEEEecCCCCc-CCCCCC--
Q 021023 20 RRVKLFTCSWIPQNQEPKALIFICHGYAMECSI----------GMNSTAI---RLANEGYACYGIDYQGHG-KSAGLS-- 83 (318)
Q Consensus 20 ~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~----------~~~~~~~---~l~~~g~~v~~~d~~G~G-~s~~~~-- 83 (318)
++..|.|..|+..+.....+|+++||+.+++.. ||..++. .+....|.||+.|..|.. .|.++.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 356899999988765667789999999986432 4344332 233335999999999875 443221
Q ss_pred --C--------CCCChHhHHHHHHHHHHHHHhhhhccCceEE-EEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccc
Q 021023 84 --G--------YIDNFDDLVDDCFNHFTSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAEN 152 (318)
Q Consensus 84 --~--------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 152 (318)
. +..++.++++--..+++.| +.+++. ++|-||||+.++.++..+|++|..++.+++.......
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L------GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDAL------GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ 187 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhc------CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH
Confidence 1 2356778777777788888 899987 9999999999999999999999999999887655321
Q ss_pred cCCchhHHHHHhhhhhcCCCcccC-------CC------hhhhhhhhcCh-hhhHhhhh----CCCCcC-----------
Q 021023 153 VKPHPLVISVLTKLCKFIPTWKII-------PS------QDIVDVAFKLP-EKRKEIRA----NPYCYK----------- 203 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~-~~~~~~~~----~~~~~~----------- 203 (318)
. ..+....+.....-|.|.-. +. +.+....+..+ .....+.. ++....
T Consensus 188 ~---ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~ 264 (368)
T COG2021 188 N---IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLD 264 (368)
T ss_pred H---HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHH
Confidence 1 11112222221222222100 00 00000001111 01111100 000000
Q ss_pred -------CccchhhHHHH---------hhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEe-c
Q 021023 204 -------GRPRLKTGYEL---------MRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLY-E 266 (318)
Q Consensus 204 -------~~~~~~~~~~~---------~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~ 266 (318)
..........+ .....++...++++++|++++.-+.|.+.|++..+++.+.+....+ ++++ .
T Consensus 265 ~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S 343 (368)
T COG2021 265 YQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDS 343 (368)
T ss_pred HHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecC
Confidence 00000000000 0011234455888999999999999999999999999999954433 5454 5
Q ss_pred CCcccccccCCccchHHHHHHHHHHHHH
Q 021023 267 GMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 267 ~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
..||..++.+ .+.+...|..||+.
T Consensus 344 ~~GHDaFL~e----~~~~~~~i~~fL~~ 367 (368)
T COG2021 344 PYGHDAFLVE----SEAVGPLIRKFLAL 367 (368)
T ss_pred CCCchhhhcc----hhhhhHHHHHHhhc
Confidence 6799988833 33477888888863
No 90
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=5.1e-18 Score=122.34 Aligned_cols=224 Identities=16% Similarity=0.151 Sum_probs=141.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHH-HHHhhhhccCce
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT-SICEKEENKEKM 113 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~-~l~~~~~~~~~~ 113 (318)
..++.++++|-.|+++..| +.+...|.. .+.++.+++||+|..-..+.. .+++.+++.+...+. .. ...+
T Consensus 5 ~~~~~L~cfP~AGGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~------~d~P 75 (244)
T COG3208 5 GARLRLFCFPHAGGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPL------LDAP 75 (244)
T ss_pred CCCceEEEecCCCCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcccc------CCCC
Confidence 4567799999889998877 999988865 499999999999987655544 588888888888777 34 5679
Q ss_pred EEEEEEchhHHHHHHHHhhCC---CCcCEEEEeCCCcccccccCC--chhHHHHHhhhhhcCCCcccCCChhhhhhhhcC
Q 021023 114 RYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIAENVKP--HPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKL 188 (318)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (318)
+.++||||||++|..+|.+.. -.+.++.+.+........... ...-..++..+..+-.. ...++.+
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~---------p~e~led 146 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGT---------PPELLED 146 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCC---------ChHHhcC
Confidence 999999999999999997532 225667666654432211111 11111222222111111 0112222
Q ss_pred hhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCC
Q 021023 189 PEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGM 268 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
++..... -+.++..+.......- ..-..++||+.++.|++|..++.+....+.+..+ ...++.+++ +
T Consensus 147 ~El~~l~---------LPilRAD~~~~e~Y~~--~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fd-G 213 (244)
T COG3208 147 PELMALF---------LPILRADFRALESYRY--PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFD-G 213 (244)
T ss_pred HHHHHHH---------HHHHHHHHHHhccccc--CCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEec-C
Confidence 2222211 1112222222211111 1124679999999999999999998888777764 478999998 6
Q ss_pred cccccccCCccchHHHHHHHHHHHH
Q 021023 269 WHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 269 gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
||++..+ ..+++...|.+.+.
T Consensus 214 gHFfl~~----~~~~v~~~i~~~l~ 234 (244)
T COG3208 214 GHFFLNQ----QREEVLARLEQHLA 234 (244)
T ss_pred cceehhh----hHHHHHHHHHHHhh
Confidence 8999883 33446666666654
No 91
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.81 E-value=1.6e-18 Score=129.17 Aligned_cols=261 Identities=13% Similarity=0.131 Sum_probs=152.7
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhH-----HHHHHHhcCcEEEEecCCCCcCCCC--CCC-C
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS-----TAIRLANEGYACYGIDYQGHGKSAG--LSG-Y 85 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~--~~~-~ 85 (318)
+.+.+.-| .+++.+++..+ +.+|+||-.|-.|.+...-|.. -...+.++ |.++-+|.||+..-.. +.. .
T Consensus 2 h~v~t~~G-~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~ 78 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQ 78 (283)
T ss_dssp EEEEETTE-EEEEEEESS---TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT--
T ss_pred ceeccCce-EEEEEEEecCC-CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccc
Confidence 45566555 88899998775 4799999999999876651133 33455454 9999999999965442 222 2
Q ss_pred CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
..+++++++++..+++++ +.+.++-+|-..||++..++|..+|++|.|+||+++......++ .|...++..
T Consensus 79 yPsmd~LAe~l~~Vl~~f------~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~--Ew~~~K~~~- 149 (283)
T PF03096_consen 79 YPSMDQLAEMLPEVLDHF------GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM--EWFYQKLSS- 149 (283)
T ss_dssp ---HHHHHCTHHHHHHHH------T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH--HHHHHHHH--
T ss_pred ccCHHHHHHHHHHHHHhC------CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH--HHHHHHHhc-
Confidence 368999999999999999 89999999999999999999999999999999999987653211 111111111
Q ss_pred hhhcCCCcccCCC--hhhhhhhhc------ChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEe
Q 021023 166 LCKFIPTWKIIPS--QDIVDVAFK------LPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHG 237 (318)
Q Consensus 166 ~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 237 (318)
+.+........ +.+....+. +......+........+...+......+..+.++....+...||+|++.|
T Consensus 150 --~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG 227 (283)
T PF03096_consen 150 --WLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVG 227 (283)
T ss_dssp --------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEE
T ss_pred --ccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEe
Confidence 11111111111 111111111 12222222222222222344555556666667777777888899999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 238 EEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 238 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
+..+.+ +.+.++..++.....++..++++|=.+..|+|.. +.+.+.=|++.
T Consensus 228 ~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~k----laea~~lFlQG 278 (283)
T PF03096_consen 228 DNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGK----LAEAFKLFLQG 278 (283)
T ss_dssp TTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHH----HHHHHHHHHHH
T ss_pred cCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHH----HHHHHHHHHcc
Confidence 998864 5667888888767789999999999999988865 88888888864
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.80 E-value=1.5e-17 Score=132.06 Aligned_cols=248 Identities=10% Similarity=0.038 Sum_probs=152.4
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
+|+||++..+.+......+++++.|.. |+.|+..|+..-+..+..... .+++++++-+.++++.+ +.+ +++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~------G~~-v~l 172 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFL------GPD-IHV 172 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHh------CCC-CcE
Confidence 378999999887766666899999988 999999999877755433333 58999998888899888 555 999
Q ss_pred EEEchhHHHHHHHHhhC-----CCCcCEEEEeCCCcccccccCCchh------HHHHHhhhhhcCC----Ccc--cCCCh
Q 021023 117 LGESMGGAMVLLLHRKK-----PDYFDGAVLVAPMCKIAENVKPHPL------VISVLTKLCKFIP----TWK--IIPSQ 179 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~----~~~--~~~~~ 179 (318)
+|+|+||.+++.+++.. |.+++.+++++++.++......... +..+........+ ... ..+..
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~ 252 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGF 252 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHH
Confidence 99999999977666543 6679999999999988542111110 0111111111101 011 11110
Q ss_pred hh-------------------hhhhh-cChhhhH----hhh--hCCCCcCCccchhhHHHHhhhchh---------HHhh
Q 021023 180 DI-------------------VDVAF-KLPEKRK----EIR--ANPYCYKGRPRLKTGYELMRVSMD---------LENR 224 (318)
Q Consensus 180 ~~-------------------~~~~~-~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 224 (318)
.. ...+. .+..... .+. .+................+....- -.-.
T Consensus 253 ~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vd 332 (406)
T TIGR01849 253 LQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVD 332 (406)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEec
Confidence 00 00010 0000000 000 000000000000011111111000 0123
Q ss_pred cCccc-ccEEEEEeCCCcccChHHHHHHHHHh---cCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 225 LDEVS-IPFIVLHGEEDKVTDKAVSVQLFKVA---SSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 225 ~~~i~-~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
+++|+ +|+|.+.|+.|.++|+..++.+.+.+ ++.+.+.+..+++||...+.-. ...++++..|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~-r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS-RFREEIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh-hhhhhhchHHHHHHHh
Confidence 56788 99999999999999999999988875 4456667888899999888443 5778899999999975
No 93
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=1.5e-18 Score=125.73 Aligned_cols=243 Identities=16% Similarity=0.198 Sum_probs=165.5
Q ss_pred CccceEEEeecCCeeEEEEeecCCCC-CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCC----CC
Q 021023 9 IKYDEEFILNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAG----LS 83 (318)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~~ 83 (318)
++.-+.+|...+|.+|..++..|... +..|.||-.||++++...| ..+.. ++..||.|+.+|.||.|.|.. +.
T Consensus 54 ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~-~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 54 VEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEW-HDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred eEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCc-ccccc-ccccceeEEEEecccCCCccccCCCCC
Confidence 33446778888999999999999865 6789999999999998866 55543 446799999999999998842 11
Q ss_pred -C---------------CCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 84 -G---------------YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 84 -~---------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
+ ..+-+.....|+..+++.+.+...++.++|.+.|.|.||.+++.+++..| +++++++.-|..
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 1 01123445678888999888888889999999999999999999999876 599999988876
Q ss_pred ccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCc
Q 021023 148 KIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDE 227 (318)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
.-........ ...+... +..+++.....+ ...+.. ....|......+
T Consensus 211 ~df~r~i~~~----------------~~~~yde-i~~y~k~h~~~e---------------~~v~~T-L~yfD~~n~A~R 257 (321)
T COG3458 211 SDFPRAIELA----------------TEGPYDE-IQTYFKRHDPKE---------------AEVFET-LSYFDIVNLAAR 257 (321)
T ss_pred ccchhheeec----------------ccCcHHH-HHHHHHhcCchH---------------HHHHHH-HhhhhhhhHHHh
Confidence 5422111000 0000000 000110000000 000111 112455666788
Q ss_pred ccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 228 VSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 228 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
+++|+|+..|-.|.++||...-..++.+.. .+++.+++.-+|...- .- ..+.+..|+...
T Consensus 258 iK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~p---~~----~~~~~~~~l~~l 317 (321)
T COG3458 258 IKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGGP---GF----QSRQQVHFLKIL 317 (321)
T ss_pred hccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccCc---ch----hHHHHHHHHHhh
Confidence 999999999999999999999999999863 4677788877786554 11 344566777654
No 94
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=3e-18 Score=121.26 Aligned_cols=257 Identities=15% Similarity=0.155 Sum_probs=154.0
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC--CCCChHh
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG--YIDNFDD 91 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~ 91 (318)
..+...||..+..+.|... ++... .+++-|..+-...+++.++..++++||.|+.+|+||.|.|..... ....+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~-~~~~g-~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD-GKASG-RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCC-CCCCC-cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 5677889999999998443 23333 344455444444456999999999999999999999999985432 2346666
Q ss_pred HH-HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHH---------
Q 021023 92 LV-DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVIS--------- 161 (318)
Q Consensus 92 ~~-~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~--------- 161 (318)
++ .|+.++|+.+++ .....+.+.+|||+||.+.-.+. +++ +..+....+........+.....+..
T Consensus 86 wA~~D~~aal~~~~~--~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 86 WARLDFPAALAALKK--ALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhcchHHHHHHHHh--hCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeecccccc
Confidence 64 488899998843 23567899999999998765544 444 56666666665554333222111000
Q ss_pred HHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCc
Q 021023 162 VLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDK 241 (318)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 241 (318)
.+..+...++........++....+++ ..... ..+..+...+. .....+.++.+++|++.+...+|+
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~Rd--W~Rwc-R~p~y~fddp~----------~~~~~q~yaaVrtPi~~~~~~DD~ 228 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMRD--WARWC-RHPRYYFDDPA----------MRNYRQVYAAVRTPITFSRALDDP 228 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHHH--HHHHh-cCccccccChh----------HhHHHHHHHHhcCceeeeccCCCC
Confidence 000111111111111110111111110 00111 11111111111 123445667789999999999999
Q ss_pred ccChHHHHHHHHHhcCCCceEEEecC----CcccccccCCccchHHHHHHHHHHH
Q 021023 242 VTDKAVSVQLFKVASSSDKTMKLYEG----MWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
.+|+...+.+.....+...+...++. .||+...-+|- |.+++.+++|+
T Consensus 229 w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~---Ealwk~~L~w~ 280 (281)
T COG4757 229 WAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPF---EALWKEMLGWF 280 (281)
T ss_pred cCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccch---HHHHHHHHHhh
Confidence 99999999999888554456666654 49998885542 45888888876
No 95
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.78 E-value=6.1e-17 Score=132.29 Aligned_cols=242 Identities=10% Similarity=0.012 Sum_probs=143.9
Q ss_pred eEEEEeecCCC-CCCceEEEEEccCCcccccc----hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHH
Q 021023 23 KLFTCSWIPQN-QEPKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF 97 (318)
Q Consensus 23 ~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 97 (318)
.+....|.|.. ..-+.+||+++++-.....+ -.+++++|.++||+|+++|+++-+..... .+++++++.+.
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~----~~ldDYv~~i~ 275 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE----WGLSTYVDALK 275 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC----CCHHHHHHHHH
Confidence 34445566653 24457799999987443322 17899999999999999999986655422 58899999999
Q ss_pred HHHHHHHhhhhccCceEEEEEEchhHHHHHH----HHhhCCC-CcCEEEEeCCCcccccccCCchhH-HHHHhh----h-
Q 021023 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLL----LHRKKPD-YFDGAVLVAPMCKIAENVKPHPLV-ISVLTK----L- 166 (318)
Q Consensus 98 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~----~- 166 (318)
++++.++ ...+.+++.++|+|+||.+++. +++++++ +|++++++.++.++.......... ...... +
T Consensus 276 ~Ald~V~--~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~ 353 (560)
T TIGR01839 276 EAVDAVR--AITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSY 353 (560)
T ss_pred HHHHHHH--HhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHH
Confidence 9999984 3346789999999999999997 7888885 799999999998876422111111 000100 0
Q ss_pred -hhcCCCc------ccCCChh-hhhhhhc-----Chh-hhH--hhhhCCCCcCCccchhhHHHHhhhchhH---------
Q 021023 167 -CKFIPTW------KIIPSQD-IVDVAFK-----LPE-KRK--EIRANPYCYKGRPRLKTGYELMRVSMDL--------- 221 (318)
Q Consensus 167 -~~~~~~~------~~~~~~~-~~~~~~~-----~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 221 (318)
...++.. ....... +...... +.. ... .+..+...+. .........++....-.
T Consensus 354 ~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lP-g~~~~e~l~ly~~N~L~~pG~l~v~G 432 (560)
T TIGR01839 354 QAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLP-AAFHGDLLDMFKSNPLTRPDALEVCG 432 (560)
T ss_pred hcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccch-HHHHHHHHHHHhcCCCCCCCCEEECC
Confidence 0011110 0000000 0000000 000 000 0000111110 11111122222111101
Q ss_pred -HhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCccccc
Q 021023 222 -ENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLL 273 (318)
Q Consensus 222 -~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 273 (318)
.-.+++|++|++++.|..|.++|++.+....+.+.+ +++++..+ +||..-
T Consensus 433 ~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIgg 483 (560)
T TIGR01839 433 TPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQS 483 (560)
T ss_pred EEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcccc
Confidence 124678999999999999999999999999988865 56666665 678643
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=99.78 E-value=1.6e-17 Score=120.13 Aligned_cols=180 Identities=19% Similarity=0.181 Sum_probs=124.4
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC--CcCCC---CCCCCCCChHhHHH---HHHHHHHHHHhh
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG--HGKSA---GLSGYIDNFDDLVD---DCFNHFTSICEK 106 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~---~~~~~~~~~~~~~~---d~~~~l~~l~~~ 106 (318)
...|+||++||+|++...+ .++...+..+ +.++.+.=+- .|... ......++.++... .+.++++.+..+
T Consensus 16 p~~~~iilLHG~Ggde~~~-~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDL-VPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhh-hhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 6678999999999888767 5555555444 6666553221 11111 11111134444443 444555555445
Q ss_pred hhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhh
Q 021023 107 EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAF 186 (318)
Q Consensus 107 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (318)
...+.++++++|+|.||++++.+..++|..++++++++|.......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 5556789999999999999999999999999999999987755210
Q ss_pred cChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC--CCceEEE
Q 021023 187 KLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS--SDKTMKL 264 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~ 264 (318)
..-..-..|+++++|+.|++||...+.++.+.+.. .+++...
T Consensus 140 ------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~ 183 (207)
T COG0400 140 ------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRW 183 (207)
T ss_pred ------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEE
Confidence 00011257999999999999999998888877754 4678888
Q ss_pred ecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 265 YEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 265 ~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
++ .||.... + ..+.+.+|+.+.
T Consensus 184 ~~-~GH~i~~----e----~~~~~~~wl~~~ 205 (207)
T COG0400 184 HE-GGHEIPP----E----ELEAARSWLANT 205 (207)
T ss_pred ec-CCCcCCH----H----HHHHHHHHHHhc
Confidence 88 8998776 2 567777888754
No 97
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.78 E-value=6.5e-17 Score=128.09 Aligned_cols=287 Identities=14% Similarity=0.131 Sum_probs=176.9
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccch-----hHHHHHHHhcCcEEEEecCCCCcCCC
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGM-----NSTAIRLANEGYACYGIDYQGHGKSA 80 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~ 80 (318)
..+++.+++.+.+.||..+..... |..+.++|+|++.||+.+++..|. ..++-.|+++||+|..-+.||.-.|.
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRI-p~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRI-PRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeee-cCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 356789999999999997777766 433378899999999999988883 55667789999999999999976665
Q ss_pred C-----C----CCCCCChHhH-HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC---CcCEEEEeCCCc
Q 021023 81 G-----L----SGYIDNFDDL-VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVAPMC 147 (318)
Q Consensus 81 ~-----~----~~~~~~~~~~-~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~ 147 (318)
. + ....+++.++ ..|+-+.|+++.+ ..+.++++.+|||.|+.....++...|+ +|+.+++++|..
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~--~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILE--KTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHH--hccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 1 1 1234567775 4599999999944 3467899999999999999998888765 799999999998
Q ss_pred ccccccCCc-hhHHHH---HhhhhhcCCCcccCCChhhhhhh----hcCh-hhhHh---------------hhhC--CCC
Q 021023 148 KIAENVKPH-PLVISV---LTKLCKFIPTWKIIPSQDIVDVA----FKLP-EKRKE---------------IRAN--PYC 201 (318)
Q Consensus 148 ~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~---------------~~~~--~~~ 201 (318)
......... ...... ...+........+.+...+.+.+ .... ..... +... +..
T Consensus 200 ~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~ 279 (403)
T KOG2624|consen 200 FPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVY 279 (403)
T ss_pred hhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchh
Confidence 443111110 000000 00111222221222211111111 0000 00000 0000 000
Q ss_pred c---CCccchhhH---HHH-------------------hhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhc
Q 021023 202 Y---KGRPRLKTG---YEL-------------------MRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVAS 256 (318)
Q Consensus 202 ~---~~~~~~~~~---~~~-------------------~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 256 (318)
+ ....+.... .+. +.....+...+.++++|+.+.+|..|.++.++.+..+...+.
T Consensus 280 ~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~ 359 (403)
T KOG2624|consen 280 LAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLP 359 (403)
T ss_pred hccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcc
Confidence 0 000111111 111 111122234567789999999999999999999998888774
Q ss_pred CCCceEEE-ecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 257 SSDKTMKL-YEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 257 ~~~~~~~~-~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
.......+ +++-.|.-++ -.....+++.+.|.+.++...
T Consensus 360 ~~~~~~~~~~~~ynHlDFi-~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 360 NSVIKYIVPIPEYNHLDFI-WGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccccCCCccceeee-eccCcHHHHHHHHHHHHHhhh
Confidence 33332222 7888998776 223456778888888887554
No 98
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.76 E-value=3.7e-18 Score=103.91 Aligned_cols=79 Identities=42% Similarity=0.708 Sum_probs=72.4
Q ss_pred CeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHH
Q 021023 21 RVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHF 100 (318)
Q Consensus 21 g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 100 (318)
|.+|.++.|.|++. ++.+|+++||++.++..| ..+++.|+++||.|+++|+||||.|.+......+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 67899999999864 799999999999999867 9999999999999999999999999988877789999999999887
Q ss_pred H
Q 021023 101 T 101 (318)
Q Consensus 101 ~ 101 (318)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 3
No 99
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.75 E-value=8e-17 Score=121.42 Aligned_cols=246 Identities=15% Similarity=0.178 Sum_probs=96.1
Q ss_pred CCceEEEEEccCCcccc--cchhHHHHHHHhcCcEEEEecCC----CCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhh
Q 021023 35 EPKALIFICHGYAMECS--IGMNSTAIRLANEGYACYGIDYQ----GHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEE 108 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 108 (318)
..+.+||||.|++.... .|...+++.|.+.||.++-+.++ |+|. .++++-++|+.+++++++....
T Consensus 31 ~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--------~SL~~D~~eI~~~v~ylr~~~~ 102 (303)
T PF08538_consen 31 SAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--------SSLDRDVEEIAQLVEYLRSEKG 102 (303)
T ss_dssp TSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS-
T ss_pred CCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc--------chhhhHHHHHHHHHHHHHHhhc
Confidence 35668999999886532 35688889997779999999865 4443 3889999999999999965431
Q ss_pred --ccCceEEEEEEchhHHHHHHHHhhC-----CCCcCEEEEeCCCcccccccCCch---hHHHHHhhhhhcCCC---ccc
Q 021023 109 --NKEKMRYLLGESMGGAMVLLLHRKK-----PDYFDGAVLVAPMCKIAENVKPHP---LVISVLTKLCKFIPT---WKI 175 (318)
Q Consensus 109 --~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~ 175 (318)
.+.++|+|+|||-|+.-++.|+... ...|+++|+-+|..+......... ............... ...
T Consensus 103 g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~ 182 (303)
T PF08538_consen 103 GHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEI 182 (303)
T ss_dssp -----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-G
T ss_pred cccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCce
Confidence 2577999999999999999998764 257999999999987643322211 122222221111100 000
Q ss_pred CCChhhhhhhh-cChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHH-HHHHHH
Q 021023 176 IPSQDIVDVAF-KLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAV-SVQLFK 253 (318)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~-~~~~~~ 253 (318)
.+. .+..... ..+.....+..- .....-...+........+...+.+++.|+|++.+++|..||... .+.+.+
T Consensus 183 lp~-~~~~~~~~~~PiTA~Rf~SL----~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~ 257 (303)
T PF08538_consen 183 LPR-EFTPLVFYDTPITAYRFLSL----ASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLE 257 (303)
T ss_dssp G-----GGTTT-SS---HHHHHT-----S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-------------
T ss_pred eec-cccccccCCCcccHHHHHhc----cCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccc
Confidence 000 0000000 001000000000 000011111222222345566788899999999999999998753 223333
Q ss_pred HhcC---C---CceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 254 VASS---S---DKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 254 ~~~~---~---~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
++.. + ....-++||++|.+--+..++..+.+.+.+..||+
T Consensus 258 rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 258 RWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 3321 1 12355889999998865444445667888888874
No 100
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.75 E-value=1.9e-17 Score=127.76 Aligned_cols=144 Identities=16% Similarity=0.159 Sum_probs=96.6
Q ss_pred cccCCccceEEEeecCCeeEEEEeecCCC-CCCceEEEEEccCCccccc--------------c---hhHHHHHHHhcCc
Q 021023 5 IDHNIKYDEEFILNSRRVKLFTCSWIPQN-QEPKALIFICHGYAMECSI--------------G---MNSTAIRLANEGY 66 (318)
Q Consensus 5 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~--------------~---~~~~~~~l~~~g~ 66 (318)
...++..++..|...++..+..++..|.+ .++.|.||++||-++..+. + -..++..|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 45667778888888999999999999987 5788999999997654311 1 1357889999999
Q ss_pred EEEEecCCCCcCCCCCCCC----CCChHhH---------------HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHH
Q 021023 67 ACYGIDYQGHGKSAGLSGY----IDNFDDL---------------VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVL 127 (318)
Q Consensus 67 ~v~~~d~~G~G~s~~~~~~----~~~~~~~---------------~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~ 127 (318)
.|+++|.+|+|+....... .++...+ +-|...++++|.+++.++.++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 9999999999987644321 1122222 34666799999999999999999999999999999
Q ss_pred HHHhhCCCCcCEEEEeCCCccc
Q 021023 128 LLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 128 ~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
.+++..+ +|++.|..+-.+.+
T Consensus 242 ~LaALDd-RIka~v~~~~l~~~ 262 (390)
T PF12715_consen 242 WLAALDD-RIKATVANGYLCTT 262 (390)
T ss_dssp HHHHH-T-T--EEEEES-B--H
T ss_pred HHHHcch-hhHhHhhhhhhhcc
Confidence 9999874 69888887765543
No 101
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.74 E-value=6e-17 Score=130.03 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=89.1
Q ss_pred CCceEEEEEccCCccc--ccchhHHHHHHHh--cCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhcc
Q 021023 35 EPKALIFICHGYAMEC--SIGMNSTAIRLAN--EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENK 110 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~--~~~~~~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~ 110 (318)
..+|++|++||++.+. ..|...+...|.. ..|+|+++|++|+|.+..+... .....+++++.++++.+......+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCC
Confidence 4578999999998754 3353346666543 2599999999999988654333 244677888999999885443446
Q ss_pred CceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 111 EKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
.++++|+||||||.+|..++.+.|++|.++++++|....
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 789999999999999999999999999999999997654
No 102
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.73 E-value=1.7e-16 Score=112.49 Aligned_cols=155 Identities=19% Similarity=0.183 Sum_probs=103.6
Q ss_pred EEEEccCCccc-ccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEE
Q 021023 40 IFICHGYAMEC-SIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (318)
Q Consensus 40 iv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 118 (318)
|+++||++++. ..|+..+.+.|... ++|-.+++ . ..+.+++...+.+.+..+ .+++++||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~-----~P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D-----NPDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T-----S--HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C-----CCCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 68999999875 55756666677555 77777776 1 137788888888877765 45699999
Q ss_pred EchhHHHHHHHH-hhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhh
Q 021023 119 ESMGGAMVLLLH-RKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRA 197 (318)
Q Consensus 119 ~S~Gg~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (318)
||+|+..++.++ .....+|.+++|++|+......... +..
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~---------------~~~------------------------ 102 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFP---------------PEL------------------------ 102 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCT---------------CGG------------------------
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchh---------------hhc------------------------
Confidence 999999999999 7778899999999998542000000 000
Q ss_pred CCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCccccccc
Q 021023 198 NPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYG 275 (318)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 275 (318)
.. ... .....+.+|.+++.+++|+++|.+.++++++.+ +++++.++++||+...+
T Consensus 103 --------~~----------f~~--~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 103 --------DG----------FTP--LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNAAS 157 (171)
T ss_dssp --------CC----------CTT--SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSGGG
T ss_pred --------cc----------ccc--CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccccc
Confidence 00 000 111234567799999999999999999999999 68999999999987663
No 103
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.73 E-value=3.2e-17 Score=126.26 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=87.0
Q ss_pred CCceEEEEEccCCccc-ccchhHHHHHHHh-cCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 35 EPKALIFICHGYAMEC-SIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~-~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
..+|++|++||++++. ..|...+.+.+.. .+|+|+++|+++++.+.... ...+...+.+++..+++.+.+....+.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 4478899999999887 5564556665544 57999999999984332111 1134566678888888888544334567
Q ss_pred eEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 113 MRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
+++++||||||.+|..++.+.|++|.++++++|....
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 9999999999999999999999999999999988654
No 104
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.72 E-value=2.8e-15 Score=107.35 Aligned_cols=182 Identities=18% Similarity=0.155 Sum_probs=110.6
Q ss_pred EEEEccCCcccccch-hHHHHHHHhcC--cEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 40 IFICHGYAMECSIGM-NSTAIRLANEG--YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 40 iv~~hG~~~~~~~~~-~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
|+++||+.++....- ..+.+.+++.+ ..+.++|++ .......+.+.++++.. ..+.++|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~------~~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEEL------KPENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhC------CCCCeEE
Confidence 899999999887662 33445565554 466777765 35666677788888777 5556999
Q ss_pred EEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhh
Q 021023 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR 196 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (318)
+|.|+||..|..+|.+++ +++ |+++|...+...+. ..+.. ....
T Consensus 64 iGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~---------~~iG~----~~~~-------------------- 107 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQ---------DYIGE----QTNP-------------------- 107 (187)
T ss_pred EEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHH---------HhhCc----cccC--------------------
Confidence 999999999999999886 444 99999886632110 00000 0000
Q ss_pred hCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccC
Q 021023 197 ANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGE 276 (318)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 276 (318)
+. ...+............+......-..+++++.++.|.+++.+.+.. .. .++...+.+|++|.+.-
T Consensus 108 -----~~-~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~---~~--~~~~~~i~~ggdH~f~~-- 174 (187)
T PF05728_consen 108 -----YT-GESYELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAVA---KY--RGCAQIIEEGGDHSFQD-- 174 (187)
T ss_pred -----CC-CccceechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHHH---Hh--cCceEEEEeCCCCCCcc--
Confidence 00 0000000000000001101112235689999999999999976544 33 33455667888997653
Q ss_pred CccchHHHHHHHHHHH
Q 021023 277 PEENTQIVFRDILNWL 292 (318)
Q Consensus 277 p~~~~~~~~~~i~~fl 292 (318)
.++....|.+|+
T Consensus 175 ----f~~~l~~i~~f~ 186 (187)
T PF05728_consen 175 ----FEEYLPQIIAFL 186 (187)
T ss_pred ----HHHHHHHHHHhh
Confidence 445777888876
No 105
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.70 E-value=4e-15 Score=110.29 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=88.2
Q ss_pred EEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHh
Q 021023 26 TCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICE 105 (318)
Q Consensus 26 ~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 105 (318)
..++.|...+.-|++||+||+..... |+..+.++++++||.|+.+|+...+.. .-....+++.++++|+.+
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHh
Confidence 45667877778999999999996666 459999999999999999997654331 222335566666666543
Q ss_pred hh--------hccCceEEEEEEchhHHHHHHHHhhC-----CCCcCEEEEeCCCccc
Q 021023 106 KE--------ENKEKMRYLLGESMGGAMVLLLHRKK-----PDYFDGAVLVAPMCKI 149 (318)
Q Consensus 106 ~~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~ 149 (318)
.. ..+..++.|.|||.||-+|..++..+ +.+++++++++|+-..
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~ 133 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGM 133 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccc
Confidence 21 23567899999999999999999887 4589999999998754
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.69 E-value=2e-15 Score=113.16 Aligned_cols=101 Identities=23% Similarity=0.327 Sum_probs=74.4
Q ss_pred EEEEccCCcc---cccchhHHHHHHHh-cCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhh---hhccCc
Q 021023 40 IFICHGYAME---CSIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEK---EENKEK 112 (318)
Q Consensus 40 iv~~hG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 112 (318)
||++||++.. .... ..++..+++ .|+.|+.+|+|-... ..+.+..+|+.++++++.++ ...+.+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~--------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPE--------APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTT--------SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeecccccc--------ccccccccccccceeeecccccccccccc
Confidence 7999998743 3333 667777775 799999999994321 36778899999999999665 235778
Q ss_pred eEEEEEEchhHHHHHHHHhhCCC----CcCEEEEeCCCccc
Q 021023 113 MRYLLGESMGGAMVLLLHRKKPD----YFDGAVLVAPMCKI 149 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 149 (318)
+|+|+|+|.||.+++.++.+..+ .++++++++|..+.
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999864322 38999999997655
No 107
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.68 E-value=3.6e-15 Score=105.52 Aligned_cols=196 Identities=17% Similarity=0.198 Sum_probs=137.2
Q ss_pred EEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC-CCcCCCC-CCC------CCCChHhHHHH
Q 021023 24 LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ-GHGKSAG-LSG------YIDNFDDLVDD 95 (318)
Q Consensus 24 l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~-~~~------~~~~~~~~~~d 95 (318)
+..++.+... ++..||.+--+-+....-.+..+..++..||.|++||+- |-..+.. ... ...+.+...++
T Consensus 28 ldaYv~gs~~--~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~ 105 (242)
T KOG3043|consen 28 LDAYVVGSTS--SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKD 105 (242)
T ss_pred eeEEEecCCC--CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhH
Confidence 4445555553 334555555444333322288999999999999999975 3112221 000 01244455678
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCccc
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKI 175 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (318)
+..++++++ ......+|.++|+||||.++..+....| .+.+.+..-|...-
T Consensus 106 i~~v~k~lk--~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d-------------------------- 156 (242)
T KOG3043|consen 106 ITAVVKWLK--NHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD-------------------------- 156 (242)
T ss_pred HHHHHHHHH--HcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC--------------------------
Confidence 999999995 3335789999999999999999988887 57777776654321
Q ss_pred CCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHh
Q 021023 176 IPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVA 255 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 255 (318)
......+++|++++.|+.|.++|+.....+-+.+
T Consensus 157 ----------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~l 190 (242)
T KOG3043|consen 157 ----------------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKL 190 (242)
T ss_pred ----------------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHH
Confidence 1345677899999999999999999888887777
Q ss_pred cC---CCceEEEecCCcccccc-----cCCc--cchHHHHHHHHHHHHHHh
Q 021023 256 SS---SDKTMKLYEGMWHGLLY-----GEPE--ENTQIVFRDILNWLDERV 296 (318)
Q Consensus 256 ~~---~~~~~~~~~~~gH~~~~-----~~p~--~~~~~~~~~i~~fl~~~~ 296 (318)
.. .+.++.++++.+|.++. +.|+ ...++..+.+..|++..+
T Consensus 191 k~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 191 KENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred hcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 54 23479999999999884 2332 356788899999998765
No 108
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.67 E-value=1.3e-14 Score=111.19 Aligned_cols=113 Identities=17% Similarity=0.265 Sum_probs=94.4
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhc---CcEEEEecCCCCcCCCCC-----CCCCCChHhHHHHHHHHHHHHHhhhh
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANE---GYACYGIDYQGHGKSAGL-----SGYIDNFDDLVDDCFNHFTSICEKEE 108 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~l~~~~~ 108 (318)
+..|+|++|.+|-.+.| ..++..|.+. .+.|+++.+.||-.++.. ....++++++++...++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 57899999999999955 8898888744 799999999999877654 34568999999999999988854322
Q ss_pred ccCceEEEEEEchhHHHHHHHHhhCC---CCcCEEEEeCCCcccc
Q 021023 109 NKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIA 150 (318)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~ 150 (318)
....+++++|||.|++++++++.+.+ .+|.+++++-|.....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 25678999999999999999999998 7899999999886544
No 109
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.66 E-value=2.5e-14 Score=113.56 Aligned_cols=237 Identities=15% Similarity=0.177 Sum_probs=136.5
Q ss_pred ecCCeeEEEEeecC--CCCCCceEEEEEccCCccc---ccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhH
Q 021023 18 NSRRVKLFTCSWIP--QNQEPKALIFICHGYAMEC---SIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDL 92 (318)
Q Consensus 18 ~~~g~~l~~~~~~p--~~~~~~~~iv~~hG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 92 (318)
..++..+.+++|.| ....+.|+||++||++... ......+...+...|+.|+++|||-..+ ..+...
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe--------~~~p~~ 129 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPE--------HPFPAA 129 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCC--------CCCCch
Confidence 33455577889988 3334689999999987432 2221344445556799999999985432 255666
Q ss_pred HHHHHHHHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhhCCC----CcCEEEEeCCCcccccccCCchhHHHHHhh
Q 021023 93 VDDCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRKKPD----YFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (318)
.+|+.+++.++.++. ..+.++|.++|+|.||++++.++..-.+ ...+.+++.|..+... ..... ..
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~--~~---- 202 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL--PG---- 202 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch--hh----
Confidence 788888888886543 2457899999999999999999865432 4789999999887643 10000 00
Q ss_pred hhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccCh
Q 021023 166 LCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDK 245 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~ 245 (318)
... ............ ....+........ .... .......+.. -.|+++++|+.|.+.+
T Consensus 203 ---~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~-~p~~---------spl~~~~~~~-lPP~~i~~a~~D~l~~- 260 (312)
T COG0657 203 ---YGE-ADLLDAAAILAW------FADLYLGAAPDRE-DPEA---------SPLASDDLSG-LPPTLIQTAEFDPLRD- 260 (312)
T ss_pred ---cCC-ccccCHHHHHHH------HHHHhCcCccccC-CCcc---------CccccccccC-CCCEEEEecCCCcchh-
Confidence 000 000000000000 0000000000000 0000 0000011333 4689999999999987
Q ss_pred HHHHHHHHHhcC--CCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 246 AVSVQLFKVASS--SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
....+.+++.. ..+++..+++..|.+..-.. ....+....+.+|+.
T Consensus 261 -~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~a~~~~~~~~~~l~ 308 (312)
T COG0657 261 -EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PEARSALRQIAAFLR 308 (312)
T ss_pred -HHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HHHHHHHHHHHHHHH
Confidence 44555555533 45688999999997755333 223334556666665
No 110
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.66 E-value=6e-14 Score=93.67 Aligned_cols=187 Identities=16% Similarity=0.188 Sum_probs=125.1
Q ss_pred CCceEEEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCCC-----CCCCCCCChHhHHHHHHHHHHHHHhhhh
Q 021023 35 EPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSA-----GLSGYIDNFDDLVDDCFNHFTSICEKEE 108 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 108 (318)
....+||+-||.+.+.+. ++...+..|+.+|+.|..++++..-... .++....-...+...+.++-..+
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l----- 86 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL----- 86 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-----
Confidence 556689999999987654 3578889999999999999998653322 22222122334444444444444
Q ss_pred ccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcC
Q 021023 109 NKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKL 188 (318)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (318)
...+.++-|+||||-++..++..-.-.|+++++++-+..... .+.
T Consensus 87 -~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppG--KPe-------------------------------- 131 (213)
T COG3571 87 -AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPG--KPE-------------------------------- 131 (213)
T ss_pred -cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCC--Ccc--------------------------------
Confidence 567999999999999999988765445999999875543311 000
Q ss_pred hhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCC
Q 021023 189 PEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGM 268 (318)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
..-.+.+..+++|++|.+|+.|.+-..+.+ ....-+...++++++++
T Consensus 132 ------------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr~~V---a~y~ls~~iev~wl~~a 178 (213)
T COG3571 132 ------------------------------QLRTEHLTGLKTPTLITQGTRDEFGTRDEV---AGYALSDPIEVVWLEDA 178 (213)
T ss_pred ------------------------------cchhhhccCCCCCeEEeecccccccCHHHH---HhhhcCCceEEEEeccC
Confidence 011145677899999999999998777665 23333467899999999
Q ss_pred cccccccC------CccchHHHHHHHHHHHHH
Q 021023 269 WHGLLYGE------PEENTQIVFRDILNWLDE 294 (318)
Q Consensus 269 gH~~~~~~------p~~~~~~~~~~i~~fl~~ 294 (318)
.|.+--.. -+.......+.+..|...
T Consensus 179 dHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 179 DHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99764321 112344455666667654
No 111
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.65 E-value=1.7e-14 Score=125.52 Aligned_cols=228 Identities=11% Similarity=0.059 Sum_probs=135.0
Q ss_pred HHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhh--------------hhccCceEEEEEEch
Q 021023 56 STAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEK--------------EENKEKMRYLLGESM 121 (318)
Q Consensus 56 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--------------~~~~~~~~~l~G~S~ 121 (318)
.+.++|+.+||.|+.+|.||+|.|.+.... ...+..+|..++|+|+..+ ......+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 466889999999999999999999986533 2255688999999999632 112367999999999
Q ss_pred hHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhh----------hcChhh
Q 021023 122 GGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVA----------FKLPEK 191 (318)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 191 (318)
||.+++.+|...|+.++++|..++..+........... .....+.......+.... ......
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~--------~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~ 419 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLV--------RAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEA 419 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCce--------eccCCcCCcchhhHHHHhhhcccCcchhhcchHH
Confidence 99999999999888999999988876543221110000 000000000000000000 000000
Q ss_pred hHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC--CCceEEEecCCc
Q 021023 192 RKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS--SDKTMKLYEGMW 269 (318)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g 269 (318)
............... -.....++ ...++...+.++++|+|+++|..|..+++..+.++++.+.. ...++.+.+ .+
T Consensus 420 ~~~~~~~~~~~~~~~-~~~y~~fW-~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~ 496 (767)
T PRK05371 420 CEKLLAELTAAQDRK-TGDYNDFW-DDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GG 496 (767)
T ss_pred HHHHHhhhhhhhhhc-CCCccHHH-HhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CC
Confidence 000000000000000 00000011 11234456678999999999999999999988888888753 245565544 67
Q ss_pred ccccccCCccchHHHHHHHHHHHHHHhccC
Q 021023 270 HGLLYGEPEENTQIVFRDILNWLDERVATG 299 (318)
Q Consensus 270 H~~~~~~p~~~~~~~~~~i~~fl~~~~~~~ 299 (318)
|..... ....++.+.+.+|+...+...
T Consensus 497 H~~~~~---~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 497 HVYPNN---WQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred ccCCCc---hhHHHHHHHHHHHHHhccccC
Confidence 864431 123457788889998887653
No 112
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.64 E-value=1.5e-14 Score=109.85 Aligned_cols=102 Identities=20% Similarity=0.247 Sum_probs=80.5
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEE
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 117 (318)
++|+|+||.+++...| ..+++.|....+.|+.++.+|.+..... ..+++++++...+.|.... ...++.|+
T Consensus 1 ~~lf~~p~~gG~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~-----~~gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY-RPLARALPDDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQ-----PEGPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHT-----SSSSEEEE
T ss_pred CeEEEEcCCccCHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhC-----CCCCeeeh
Confidence 3699999999998877 9999999553499999999999822211 2489999988888887761 33499999
Q ss_pred EEchhHHHHHHHHhh---CCCCcCEEEEeCCCcc
Q 021023 118 GESMGGAMVLLLHRK---KPDYFDGAVLVAPMCK 148 (318)
Q Consensus 118 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 148 (318)
|||+||.+|..+|.+ .-..+..++++++...
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred ccCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999999999965 3345899999996654
No 113
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.64 E-value=1.5e-14 Score=117.90 Aligned_cols=141 Identities=16% Similarity=0.140 Sum_probs=113.4
Q ss_pred CCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEc--cCCcccccc--hhHHHH---HHHhcCcEEEEecCCCCcCCC
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICH--GYAMECSIG--MNSTAI---RLANEGYACYGIDYQGHGKSA 80 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~h--G~~~~~~~~--~~~~~~---~l~~~g~~v~~~d~~G~G~s~ 80 (318)
++......+...||++|...+|.|.+.++.|+++..+ .+.-....+ .....+ .++.+||.|+..|.||.|.|.
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 3445567788899999999999999888899999999 433221111 123334 588899999999999999999
Q ss_pred CCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccccc
Q 021023 81 GLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 81 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (318)
+......+ +.++|-.+.|+++.++++ ...+|..+|.|++|...+.+|+..|..+++++...+..+...
T Consensus 96 G~~~~~~~--~E~~Dg~D~I~Wia~QpW-sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 96 GVFDPESS--REAEDGYDTIEWLAKQPW-SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred cccceecc--ccccchhHHHHHHHhCCc-cCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 87766444 468899999999988766 677999999999999999999999988999999888877543
No 114
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.63 E-value=9.6e-15 Score=101.68 Aligned_cols=197 Identities=14% Similarity=0.147 Sum_probs=130.6
Q ss_pred CeeEEEEeecCCCCCCceEEEEEccCCc---ccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHH
Q 021023 21 RVKLFTCSWIPQNQEPKALIFICHGYAM---ECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF 97 (318)
Q Consensus 21 g~~l~~~~~~p~~~~~~~~iv~~hG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 97 (318)
|..-...+|+|. ...+.+||+||+-. +.... -..+..+.++||+|..+++- .+... .++++...++.
T Consensus 53 ~g~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY~---l~~q~----htL~qt~~~~~ 122 (270)
T KOG4627|consen 53 GGRQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGYN---LCPQV----HTLEQTMTQFT 122 (270)
T ss_pred CCceEEEEecCC--CCccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEeccC---cCccc----ccHHHHHHHHH
Confidence 336677889986 56789999999652 33333 34555666889999998763 33211 37777777877
Q ss_pred HHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh-CCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccC
Q 021023 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK-KPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKII 176 (318)
Q Consensus 98 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (318)
..++++.+... ..+.+.+-|||.|+.+|+.+..+ +..+|.++++.++..+..+...... ..
T Consensus 123 ~gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~--------------g~--- 184 (270)
T KOG4627|consen 123 HGVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTES--------------GN--- 184 (270)
T ss_pred HHHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcc--------------cc---
Confidence 77777744322 45568889999999999988765 4457999999988776532111000 00
Q ss_pred CChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhc
Q 021023 177 PSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVAS 256 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 256 (318)
...+....... ..-++ ..+..++.|+|++.|++|.-.-.++.+.+...+
T Consensus 185 ----------------------------dlgLt~~~ae~-~Scdl-~~~~~v~~~ilVv~~~~espklieQnrdf~~q~- 233 (270)
T KOG4627|consen 185 ----------------------------DLGLTERNAES-VSCDL-WEYTDVTVWILVVAAEHESPKLIEQNRDFADQL- 233 (270)
T ss_pred ----------------------------ccCcccchhhh-cCccH-HHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-
Confidence 00000000000 00111 345677899999999999877778888888888
Q ss_pred CCCceEEEecCCcccccccCC
Q 021023 257 SSDKTMKLYEGMWHGLLYGEP 277 (318)
Q Consensus 257 ~~~~~~~~~~~~gH~~~~~~p 277 (318)
..+.+..+++.+|+-.+++.
T Consensus 234 -~~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 234 -RKASFTLFKNYDHYDIIEET 253 (270)
T ss_pred -hhcceeecCCcchhhHHHHh
Confidence 55789999999999887554
No 115
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=5.5e-14 Score=121.95 Aligned_cols=232 Identities=18% Similarity=0.182 Sum_probs=152.9
Q ss_pred cCCeeEEEEeecCCC---CCCceEEEEEccCCcccc---cchhHHHH-HHHhcCcEEEEecCCCCcCCCCCCCC--CCCh
Q 021023 19 SRRVKLFTCSWIPQN---QEPKALIFICHGYAMECS---IGMNSTAI-RLANEGYACYGIDYQGHGKSAGLSGY--IDNF 89 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~---~~~~~~iv~~hG~~~~~~---~~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~ 89 (318)
.||....+....|++ .+.-|.+|.+||++++.. .+...+.. .+...|+.|+.+|.||.|........ ...+
T Consensus 505 ~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~l 584 (755)
T KOG2100|consen 505 IDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNL 584 (755)
T ss_pred eccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhc
Confidence 389999999999964 456688999999997332 12123333 35566999999999998876533111 0011
Q ss_pred -HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCc-CEEEEeCCCcccccccCCchhHHHHHhhhh
Q 021023 90 -DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYF-DGAVLVAPMCKIAENVKPHPLVISVLTKLC 167 (318)
Q Consensus 90 -~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v-~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (318)
..-++|...+++.+.+....+.+++.++|+|+||.+++.++...|+.+ +..+.++|..+..- ..... .
T Consensus 585 G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~-yds~~-t-------- 654 (755)
T KOG2100|consen 585 GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY-YDSTY-T-------- 654 (755)
T ss_pred CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee-ecccc-c--------
Confidence 112567777777776666678899999999999999999999998555 45599999887631 00000 0
Q ss_pred hcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccE-EEEEeCCCcccChH
Q 021023 168 KFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPF-IVLHGEEDKVTDKA 246 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-lii~G~~D~~~~~~ 246 (318)
+.+...+... ... + ........+..++.|. |++||+.|..|+.+
T Consensus 655 -------------------------erymg~p~~~------~~~---y-~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q 699 (755)
T KOG2100|consen 655 -------------------------ERYMGLPSEN------DKG---Y-EESSVSSPANNIKTPKLLLIHGTEDDNVHFQ 699 (755)
T ss_pred -------------------------HhhcCCCccc------cch---h-hhccccchhhhhccCCEEEEEcCCcCCcCHH
Confidence 0000000000 000 0 0012233445566665 99999999999999
Q ss_pred HHHHHHHHhcCC--CceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhcc
Q 021023 247 VSVQLFKVASSS--DKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT 298 (318)
Q Consensus 247 ~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 298 (318)
.+..+.+.+... ..+..++|+.+|.+..-. ....+...+..|+......
T Consensus 700 ~s~~~~~aL~~~gv~~~~~vypde~H~is~~~---~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 700 QSAILIKALQNAGVPFRLLVYPDENHGISYVE---VISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred HHHHHHHHHHHCCCceEEEEeCCCCccccccc---chHHHHHHHHHHHHHHcCc
Confidence 999998888543 368889999999988732 3356888999999865543
No 116
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.62 E-value=2.8e-13 Score=105.52 Aligned_cols=248 Identities=15% Similarity=0.198 Sum_probs=142.7
Q ss_pred EEeecCCeeEEEEeecCCCC---CCceEEEEEccCCcc-----cccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCC
Q 021023 15 FILNSRRVKLFTCSWIPQNQ---EPKALIFICHGYAME-----CSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGY 85 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~---~~~~~iv~~hG~~~~-----~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~ 85 (318)
.+.......+..++|.|... +..|.|||+||+|.. ...| ..+...++.. +..|+.+|||---+..-+
T Consensus 65 dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y-~~~~~~~a~~~~~vvvSVdYRLAPEh~~P--- 140 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAY-DSFCTRLAAELNCVVVSVDYRLAPEHPFP--- 140 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchh-HHHHHHHHHHcCeEEEecCcccCCCCCCC---
Confidence 34445566788899988752 457999999998742 3334 7788887554 899999999965443322
Q ss_pred CCChHhHHHHHHHHHHHHHhh----hhccCceEEEEEEchhHHHHHHHHhhC------CCCcCEEEEeCCCcccccccCC
Q 021023 86 IDNFDDLVDDCFNHFTSICEK----EENKEKMRYLLGESMGGAMVLLLHRKK------PDYFDGAVLVAPMCKIAENVKP 155 (318)
Q Consensus 86 ~~~~~~~~~d~~~~l~~l~~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~ 155 (318)
...+|...++.++.++ ...+.++++|+|-|.||.+|..+|.+. +.++++.|++.|.....+....
T Consensus 141 -----a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 141 -----AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred -----ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCH
Confidence 2234444555554332 344778999999999999999988652 3579999999998876433221
Q ss_pred chhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccc-ccEEE
Q 021023 156 HPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVS-IPFIV 234 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~li 234 (318)
... ...... +.........+......+... ...++.... .. ........... .|+++
T Consensus 216 e~~--~~~~~~----~~~~~~~~~~~w~~~lP~~~~---~~~~p~~np--------~~-----~~~~~d~~~~~lp~tlv 273 (336)
T KOG1515|consen 216 EKQ--QNLNGS----PELARPKIDKWWRLLLPNGKT---DLDHPFINP--------VG-----NSLAKDLSGLGLPPTLV 273 (336)
T ss_pred HHH--HhhcCC----cchhHHHHHHHHHHhCCCCCC---CcCCccccc--------cc-----cccccCccccCCCceEE
Confidence 110 000000 000000000000000000000 000000000 00 00001112223 35999
Q ss_pred EEeCCCcccChHHHHHHHHHhcCCC--ceEEEecCCcccccccCCc-cchHHHHHHHHHHHHHH
Q 021023 235 LHGEEDKVTDKAVSVQLFKVASSSD--KTMKLYEGMWHGLLYGEPE-ENTQIVFRDILNWLDER 295 (318)
Q Consensus 235 i~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~-~~~~~~~~~i~~fl~~~ 295 (318)
+.++.|.+. .....+.+++...+ +++..++++.|.++.-.|. ....++.+.+.+|+.+.
T Consensus 274 ~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 274 VVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999886 44445566664433 4566789999999886664 56778888999998753
No 117
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.62 E-value=2.7e-14 Score=104.70 Aligned_cols=125 Identities=19% Similarity=0.173 Sum_probs=87.6
Q ss_pred EEEEeecCCCC--CCceEEEEEccCCcccccchh-HHHHHHHh-cCcEEEEecCCCCcCCCCCC----CCCCChHhHHHH
Q 021023 24 LFTCSWIPQNQ--EPKALIFICHGYAMECSIGMN-STAIRLAN-EGYACYGIDYQGHGKSAGLS----GYIDNFDDLVDD 95 (318)
Q Consensus 24 l~~~~~~p~~~--~~~~~iv~~hG~~~~~~~~~~-~~~~~l~~-~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~d 95 (318)
|.|++|.|+.. .+.|.||++||.+++...+.. .-...+++ +||.|+.++........... .....-......
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 57899999852 356999999999998775521 01123544 48999999865322111110 000011123556
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
+.++++++..+..++..+|++.|+|.||+++..++..+|+.|.++...++...
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 77888888777777899999999999999999999999999999888877643
No 118
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.61 E-value=2e-13 Score=109.45 Aligned_cols=190 Identities=19% Similarity=0.226 Sum_probs=106.9
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCC------CC----CC--------------CCCCC--
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKS------AG----LS--------------GYIDN-- 88 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s------~~----~~--------------~~~~~-- 88 (318)
..-|+|||-||++++...| ..++..||++||.|+++|.|..-.+ +. .. .....
T Consensus 98 ~~~PvvIFSHGlgg~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 4579999999999999988 9999999999999999999953211 00 00 00000
Q ss_pred --------hHhHHHHHHHHHHHHHhhh--------------------hccCceEEEEEEchhHHHHHHHHhhCCCCcCEE
Q 021023 89 --------FDDLVDDCFNHFTSICEKE--------------------ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGA 140 (318)
Q Consensus 89 --------~~~~~~d~~~~l~~l~~~~--------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 140 (318)
++.-++++..+++.+.... ..+..++.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 1112456666666664211 12356899999999999999988776 569999
Q ss_pred EEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchh
Q 021023 141 VLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMD 220 (318)
Q Consensus 141 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (318)
|+++|+..... .
T Consensus 256 I~LD~W~~Pl~-------------------------------------------------------------------~- 267 (379)
T PF03403_consen 256 ILLDPWMFPLG-------------------------------------------------------------------D- 267 (379)
T ss_dssp EEES---TTS--------------------------------------------------------------------G-
T ss_pred EEeCCcccCCC-------------------------------------------------------------------c-
Confidence 99998753210 0
Q ss_pred HHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhc-CCCceEEEecCCccccccc-------------------CCccc
Q 021023 221 LENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVAS-SSDKTMKLYEGMWHGLLYG-------------------EPEEN 280 (318)
Q Consensus 221 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-------------------~p~~~ 280 (318)
+....++.|+|+|..+. +.-......+.+... ..+..++.+.|+.|.-+.+ +|...
T Consensus 268 --~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a 343 (379)
T PF03403_consen 268 --EIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERA 343 (379)
T ss_dssp --GGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHH
T ss_pred --ccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHH
Confidence 11245678999998875 222333333332221 2567888999999985543 33344
Q ss_pred hHHHHHHHHHHHHHHhcc
Q 021023 281 TQIVFRDILNWLDERVAT 298 (318)
Q Consensus 281 ~~~~~~~i~~fl~~~~~~ 298 (318)
.+...+.+.+||++++.-
T Consensus 344 ~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 344 LRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 667788899999999764
No 119
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.61 E-value=1.8e-14 Score=123.09 Aligned_cols=135 Identities=18% Similarity=0.083 Sum_probs=97.5
Q ss_pred EEEeecCCeeEEEEeecCCC------CCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCC-----
Q 021023 14 EFILNSRRVKLFTCSWIPQN------QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL----- 82 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~------~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~----- 82 (318)
..+...++.++.|...+... ....|+|||+||++++...| ..+++.|+++||+|+++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHH-HHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 35566677777766543221 12357999999999999988 8999999989999999999999999432
Q ss_pred -----CCC------------CCChHhHHHHHHHHHHHHH------hh----hhccCceEEEEEEchhHHHHHHHHhhCCC
Q 021023 83 -----SGY------------IDNFDDLVDDCFNHFTSIC------EK----EENKEKMRYLLGESMGGAMVLLLHRKKPD 135 (318)
Q Consensus 83 -----~~~------------~~~~~~~~~d~~~~l~~l~------~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (318)
... ..++++.+.|+..+...+. .. ...+..+++++||||||.++..++.....
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~ 578 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANT 578 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCc
Confidence 111 1267889999999998884 10 11356799999999999999999875222
Q ss_pred -----------CcCEEEEeCCCccc
Q 021023 136 -----------YFDGAVLVAPMCKI 149 (318)
Q Consensus 136 -----------~v~~~vl~~~~~~~ 149 (318)
.+....+..|....
T Consensus 579 ~~~~~~~~~l~~~~~a~l~~pgGgi 603 (792)
T TIGR03502 579 PLGSPTADALYAVNAASLQNPGGGI 603 (792)
T ss_pred cccCCccccccccceeeeecCCccH
Confidence 24556666555444
No 120
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1.9e-13 Score=111.03 Aligned_cols=243 Identities=15% Similarity=0.076 Sum_probs=151.4
Q ss_pred ccccCCccceEEEeecCCeeEEEEeecCCC---CCCceEEEEEccCCcccc---cc--h-hHHHHHHHhcCcEEEEecCC
Q 021023 4 EIDHNIKYDEEFILNSRRVKLFTCSWIPQN---QEPKALIFICHGYAMECS---IG--M-NSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 4 ~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~~hG~~~~~~---~~--~-~~~~~~l~~~g~~v~~~d~~ 74 (318)
+.|+-.+.+...+....|..+..-+|.|.+ +++-|+++++-|+++-.- .| . .--...|+..||.|+.+|-|
T Consensus 606 ~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR 685 (867)
T KOG2281|consen 606 PPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNR 685 (867)
T ss_pred CCCccCChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCC
Confidence 444445556666778888999999999875 456799999999886421 12 1 11234688899999999999
Q ss_pred CCcCCCCC-------CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 75 GHGKSAGL-------SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 75 G~G~s~~~-------~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
|.-...-. .-....++++++-+.-+.+.. .-.+.++|.+-|+|+||++++....++|+.++.+|.-+|..
T Consensus 686 GS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~---gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 686 GSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT---GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred CccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc---CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 96444311 111123445554444444332 13477899999999999999999999999878777777665
Q ss_pred ccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCc
Q 021023 148 KIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDE 227 (318)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
.... .+...-+.+...+......-.... .....+.+..
T Consensus 763 ~W~~-----------------------------------YDTgYTERYMg~P~~nE~gY~agS-------V~~~Veklpd 800 (867)
T KOG2281|consen 763 DWRL-----------------------------------YDTGYTERYMGYPDNNEHGYGAGS-------VAGHVEKLPD 800 (867)
T ss_pred eeee-----------------------------------ecccchhhhcCCCccchhcccchh-------HHHHHhhCCC
Confidence 4311 000000111111100000000000 0111233444
Q ss_pred ccccEEEEEeCCCcccChHHHHHHHHHhcC--CCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 228 VSIPFIVLHGEEDKVTDKAVSVQLFKVASS--SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 228 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
-....|++||--|..|.......+...+.. +.-++.++|+-.|.+-.- +...-.-..+..|+++
T Consensus 801 epnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~---es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 801 EPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNP---ESGIYYEARLLHFLQE 866 (867)
T ss_pred CCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCC---ccchhHHHHHHHHHhh
Confidence 445689999999999998888788777633 446899999999987652 3334466778888865
No 121
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.60 E-value=8.9e-14 Score=108.16 Aligned_cols=264 Identities=14% Similarity=0.123 Sum_probs=151.7
Q ss_pred eecCCCCC-CceEEEEEccCCcccccc----hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHH-HHHHHHHH
Q 021023 28 SWIPQNQE-PKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV-DDCFNHFT 101 (318)
Q Consensus 28 ~~~p~~~~-~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~-~d~~~~l~ 101 (318)
.|.|...+ -+++++++|.+-.....+ -.+++..|.++|..|+.+++++-..+... .++++++ +.+...++
T Consensus 97 qy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid 172 (445)
T COG3243 97 QYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAID 172 (445)
T ss_pred ccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHH
Confidence 34454322 456789999876443322 17889999999999999999987666542 4788888 77888888
Q ss_pred HHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCC-cCEEEEeCCCcccccccCCch-----hHHHHHhhh--hhcCCCc
Q 021023 102 SICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY-FDGAVLVAPMCKIAENVKPHP-----LVISVLTKL--CKFIPTW 173 (318)
Q Consensus 102 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~ 173 (318)
.+++ ..+.++|.++|+|.||+++..+++.++.+ |+.++++.+..++.......- .+......+ ...++.+
T Consensus 173 ~v~~--itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~ 250 (445)
T COG3243 173 TVKD--ITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGW 250 (445)
T ss_pred HHHH--HhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChH
Confidence 7743 33668999999999999999999888877 999999998888764321111 011111111 0111111
Q ss_pred cc------CCCh-----hhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhc----h---------hHHhhcCccc
Q 021023 174 KI------IPSQ-----DIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVS----M---------DLENRLDEVS 229 (318)
Q Consensus 174 ~~------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~~~i~ 229 (318)
.. .... .+...+........+-..................+++.. . ...-.+.+|+
T Consensus 251 ~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It 330 (445)
T COG3243 251 YMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDIT 330 (445)
T ss_pred HHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcc
Confidence 10 0000 001111110000000000000000011111111121110 0 1112467889
Q ss_pred ccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccC-CccchHHHHH----HHHHHHHHHhccC
Q 021023 230 IPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGE-PEENTQIVFR----DILNWLDERVATG 299 (318)
Q Consensus 230 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~~~~----~i~~fl~~~~~~~ 299 (318)
||++++.|+.|.++|.+......+.+.+ .++++.. ++||....=+ |.....+.+. ....|+.+.....
T Consensus 331 ~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~~ 403 (445)
T COG3243 331 CPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEHP 403 (445)
T ss_pred cceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccCC
Confidence 9999999999999999999888888743 3555554 5899866544 3333333344 6778887665443
No 122
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.60 E-value=1.3e-13 Score=104.98 Aligned_cols=123 Identities=14% Similarity=0.055 Sum_probs=101.5
Q ss_pred EeecCCeeEEEEeecCCCC---CCceEEEEEccCCcccccchhHHHHHHHhc---C------cEEEEecCCCCcCCCCCC
Q 021023 16 ILNSRRVKLFTCSWIPQNQ---EPKALIFICHGYAMECSIGMNSTAIRLANE---G------YACYGIDYQGHGKSAGLS 83 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~---g------~~v~~~d~~G~G~s~~~~ 83 (318)
-+...|.+||+....|++. +.-.+++++|||+|+-..+ ..+++.|.+. | |.||++.+||+|.|+.+.
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EF-ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s 206 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREF-YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS 206 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHH-HhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc
Confidence 3456899999998877631 2224699999999998877 6788888654 2 899999999999999887
Q ss_pred CCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCC
Q 021023 84 GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (318)
Q Consensus 84 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (318)
....+..+.+.-+..++-.+ +..++.+=|..+|+.++..+|..+|++|.|+-+--+
T Consensus 207 k~GFn~~a~ArvmrkLMlRL------g~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 207 KTGFNAAATARVMRKLMLRL------GYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred cCCccHHHHHHHHHHHHHHh------CcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 77678888888888888887 899999999999999999999999999988755433
No 123
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.56 E-value=1.4e-12 Score=100.23 Aligned_cols=248 Identities=13% Similarity=0.046 Sum_probs=137.0
Q ss_pred EEEEeecCCC--CCCceEEEEEccCCcccccchhHH-HHHHHhcCcEEEEecCCCCcCCCCCCCC---CCChH-------
Q 021023 24 LFTCSWIPQN--QEPKALIFICHGYAMECSIGMNST-AIRLANEGYACYGIDYQGHGKSAGLSGY---IDNFD------- 90 (318)
Q Consensus 24 l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~~------- 90 (318)
-++....|.. .+.+|++|.+.|.|......-..+ +..|.+.|+..+.+..|-||...+.... ..+..
T Consensus 77 a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 77 ARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred eEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 3444445553 256888999999887654221334 7888888999999999999976533211 11222
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccccc---c-cCCchhHHHHHhhh
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE---N-VKPHPLVISVLTKL 166 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~---~-~~~~~~~~~~~~~~ 166 (318)
..+.+...+++|+.++ +..++.+.|.||||.+|...|...|..+..+-++++...... . +...-.+..+...+
T Consensus 157 ~~i~E~~~Ll~Wl~~~---G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~ 233 (348)
T PF09752_consen 157 ATILESRALLHWLERE---GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQF 233 (348)
T ss_pred HHHHHHHHHHHHHHhc---CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHh
Confidence 2356777888888544 777999999999999999999999987776666665433211 0 00011111111110
Q ss_pred hhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccc-----ccEEEEEeCCCc
Q 021023 167 CKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVS-----IPFIVLHGEEDK 241 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~P~lii~G~~D~ 241 (318)
.... +. ............ ...... .....-...........+....+.+.. -.+.++.+++|.
T Consensus 234 ~~~~----~~---~~~~~~~~~~~~-~~~~~~----~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~Da 301 (348)
T PF09752_consen 234 EDTV----YE---EEISDIPAQNKS-LPLDSM----EERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDA 301 (348)
T ss_pred cccc----hh---hhhcccccCccc-ccchhh----ccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCce
Confidence 0000 00 000000000000 000000 000000111111111112222233332 347899999999
Q ss_pred ccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 242 VTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
+||......+.+.. |++++.++++ ||...+= ...+.+.++|.+-+
T Consensus 302 YVPr~~v~~Lq~~W--PGsEvR~l~g-GHVsA~L---~~q~~fR~AI~Daf 346 (348)
T PF09752_consen 302 YVPRHGVLSLQEIW--PGSEVRYLPG-GHVSAYL---LHQEAFRQAIYDAF 346 (348)
T ss_pred EechhhcchHHHhC--CCCeEEEecC-CcEEEee---echHHHHHHHHHHh
Confidence 99999988988888 8899999986 8975441 12233555555544
No 124
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.56 E-value=3.5e-14 Score=105.20 Aligned_cols=178 Identities=17% Similarity=0.200 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCc
Q 021023 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTW 173 (318)
Q Consensus 94 ~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (318)
+-+..++++|++++.++.++|.|+|.|.||-+|+.+|..+| .|+++|.++|............... ..++..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~~ 75 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPYL 75 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE---
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCcC
Confidence 34677889998888888899999999999999999999999 5999999998876543211100000 000000
Q ss_pred ccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhh--hchhHHhhcCcccccEEEEEeCCCcccChHH-HHH
Q 021023 174 KIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMR--VSMDLENRLDEVSIPFIVLHGEEDKVTDKAV-SVQ 250 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~-~~~ 250 (318)
..... .... .... ............ ......-.+.++++|+|++.|++|.+.|... ++.
T Consensus 76 ~~~~~------------~~~~--~~~~----~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~ 137 (213)
T PF08840_consen 76 PFDIS------------KFSW--NEPG----LLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQ 137 (213)
T ss_dssp -B-GG------------G-EE---TTS-----EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHH
T ss_pred CcChh------------hcee--cCCc----ceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHH
Confidence 00000 0000 0000 000000000000 0011112357789999999999999998765 444
Q ss_pred HHHHhcC---C-CceEEEecCCccccccc-CCc-----------------------cchHHHHHHHHHHHHHHhc
Q 021023 251 LFKVASS---S-DKTMKLYEGMWHGLLYG-EPE-----------------------ENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 251 ~~~~~~~---~-~~~~~~~~~~gH~~~~~-~p~-----------------------~~~~~~~~~i~~fl~~~~~ 297 (318)
+.+++.. + +.+++.|+++||.+... .|. ...++.++.+++||++++.
T Consensus 138 i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 138 IEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4455532 2 46888999999986421 110 1346788999999999875
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.56 E-value=1.6e-13 Score=96.13 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=83.9
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEE
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 117 (318)
..+||+-|=++-...- ..+++.|+++|+.|+.+|-+-+-.+. -+.++.+.|+.+++++. ....+.++++|+
T Consensus 3 t~~v~~SGDgGw~~~d-~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y--~~~w~~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLD-KQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHY--RARWGRKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchhhh-HHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHH--HHHhCCceEEEE
Confidence 4578888866655544 88999999999999999987665543 37888999999999998 555578999999
Q ss_pred EEchhHHHHHHHHhhCC----CCcCEEEEeCCCccc
Q 021023 118 GESMGGAMVLLLHRKKP----DYFDGAVLVAPMCKI 149 (318)
Q Consensus 118 G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~~~ 149 (318)
|+|+|+-+......+-| ++|+.++|++|....
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTA 109 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcc
Confidence 99999988888777766 479999999987644
No 126
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.51 E-value=2.7e-12 Score=96.55 Aligned_cols=207 Identities=17% Similarity=0.174 Sum_probs=122.9
Q ss_pred CceEEEEEccCCcccccchhHHHHHHH-hcCc--E--EEEecCCCC----cCCC----CC-------CCCCCChHhHHHH
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLA-NEGY--A--CYGIDYQGH----GKSA----GL-------SGYIDNFDDLVDD 95 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~-~~g~--~--v~~~d~~G~----G~s~----~~-------~~~~~~~~~~~~d 95 (318)
...+.||+||++++...+ ..++..+. +.|. . ++.++--|. |.=. .+ .....+....++.
T Consensus 10 ~~tPTifihG~~gt~~s~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSF-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCCCC-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHH-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 456789999999999988 99999996 5543 2 333444342 2111 00 1111267788999
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC-----CcCEEEEeCCCcccccccCCchhHHHHHhhhhhcC
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD-----YFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFI 170 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (318)
+..++.+| +..+..+++.+|||||||..++.++..+.. .+..+|.++++..............
T Consensus 89 l~~vl~~L--~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~---------- 156 (255)
T PF06028_consen 89 LKKVLKYL--KKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQN---------- 156 (255)
T ss_dssp HHHHHHHH--HHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT----------
T ss_pred HHHHHHHH--HHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhh----------
Confidence 99999999 666789999999999999999999877432 4899999998776532111100000
Q ss_pred CCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhH-HhhcCcccccEEEEEeC------CCccc
Q 021023 171 PTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDL-ENRLDEVSIPFIVLHGE------EDKVT 243 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~lii~G~------~D~~~ 243 (318)
........... ..+...... +..++ -++.+|-|+|. .|..|
T Consensus 157 ----------------------------~~~~~gp~~~~---~~y~~l~~~~~~~~p-~~i~VLnI~G~~~~g~~sDG~V 204 (255)
T PF06028_consen 157 ----------------------------DLNKNGPKSMT---PMYQDLLKNRRKNFP-KNIQVLNIYGDLEDGSNSDGIV 204 (255)
T ss_dssp -----------------------------CSTT-BSS-----HHHHHHHHTHGGGST-TT-EEEEEEEESBTTCSBTSSS
T ss_pred ----------------------------hhcccCCcccC---HHHHHHHHHHHhhCC-CCeEEEEEecccCCCCCCCeEE
Confidence 00000000000 111111111 12222 24679999998 88999
Q ss_pred ChHHHHHHHHHhcC--CCceEEEecC--CcccccccCCccchHHHHHHHHHHH
Q 021023 244 DKAVSVQLFKVASS--SDKTMKLYEG--MWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 244 ~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
|...+..+...+.. ...+-.++.| +.|.-..|++ ++.+.|.+||
T Consensus 205 ~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-----~V~~~I~~FL 252 (255)
T PF06028_consen 205 PNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-----QVDKLIIQFL 252 (255)
T ss_dssp BHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-----HHHHHHHHHH
T ss_pred eHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-----HHHHHHHHHh
Confidence 99998887776643 2334455554 6898888665 3889999997
No 127
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.51 E-value=9.4e-13 Score=95.75 Aligned_cols=119 Identities=15% Similarity=0.119 Sum_probs=90.6
Q ss_pred eEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHH
Q 021023 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTS 102 (318)
Q Consensus 23 ~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 102 (318)
.....++.|...+.-|+|+|+||+.-....| ..+..+++++||-|+++++-..-. + +-.+.+++..++++|
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~---p-----~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLYNSFY-SQLLAHIASHGFIVVAPQLYTLFP---P-----DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhhhHHH-HHHHHHHhhcCeEEEechhhcccC---C-----CchHHHHHHHHHHHH
Confidence 4455667777777889999999999887745 999999999999999999874311 1 233446677777777
Q ss_pred HHhh--------hhccCceEEEEEEchhHHHHHHHHhhCC--CCcCEEEEeCCCcccc
Q 021023 103 ICEK--------EENKEKMRYLLGESMGGAMVLLLHRKKP--DYFDGAVLVAPMCKIA 150 (318)
Q Consensus 103 l~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~ 150 (318)
+... -..+..++.++|||.||-.|..+|..+. -.+.++|-++|.....
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 7432 1235679999999999999999998764 2478899999887653
No 128
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.50 E-value=2.1e-12 Score=95.56 Aligned_cols=124 Identities=18% Similarity=0.159 Sum_probs=80.8
Q ss_pred cCCeeEEEEeecCCC---CCCc-eEEEEEccCCcccccchhHHHH-------HHHhcCcEEEEecCCC-CcCCCCCCCCC
Q 021023 19 SRRVKLFTCSWIPQN---QEPK-ALIFICHGYAMECSIGMNSTAI-------RLANEGYACYGIDYQG-HGKSAGLSGYI 86 (318)
Q Consensus 19 ~~g~~l~~~~~~p~~---~~~~-~~iv~~hG~~~~~~~~~~~~~~-------~l~~~g~~v~~~d~~G-~G~s~~~~~~~ 86 (318)
.-|.+|.|+.|.|.+ ++.. |.+||+||.|..+..-...+.. ..-+.+|-|+++.+-- +..++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~----- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE----- 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-----
Confidence 468899999999964 2333 9999999998766533111111 1111123444444211 111111
Q ss_pred CChHhHHHHHHHHHH-HHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 87 DNFDDLVDDCFNHFT-SICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~-~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
..+........+++ .+.+..+++..+|+++|.|+||+-++.++.++|+.+.+.+++++..+
T Consensus 244 -~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 244 -KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred -ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 12233333444444 66667777889999999999999999999999999999999998654
No 129
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.49 E-value=5.3e-13 Score=102.83 Aligned_cols=225 Identities=16% Similarity=0.114 Sum_probs=133.9
Q ss_pred CeeEEEEeecCCCC-C-----CceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC--cCCCCCC----C-CCC
Q 021023 21 RVKLFTCSWIPQNQ-E-----PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH--GKSAGLS----G-YID 87 (318)
Q Consensus 21 g~~l~~~~~~p~~~-~-----~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~----~-~~~ 87 (318)
+.++...++.|... . ..|+|++-||.|++...+ ..+++.+++.||.|..+|.+|. |...... . ...
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 55677777777642 2 579999999999998877 9999999999999999999994 3332111 1 001
Q ss_pred ChHhHHHHHHHHHHHHHhh---h----hccCceEEEEEEchhHHHHHHHHhhCCCCcC--------EEEEeCCCcccccc
Q 021023 88 NFDDLVDDCFNHFTSICEK---E----ENKEKMRYLLGESMGGAMVLLLHRKKPDYFD--------GAVLVAPMCKIAEN 152 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~---~----~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~--------~~vl~~~~~~~~~~ 152 (318)
-+.+...|+..+|++|... + ..+..+|.++|||+||+.++.++.-..+... +.+...+....
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~--- 204 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLN--- 204 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcC---
Confidence 2345577888899888665 2 2356799999999999999998865443110 11111111100
Q ss_pred cCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccE
Q 021023 153 VKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPF 232 (318)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 232 (318)
.+..........+ .....++++..+..+..++.... ... ..-+.+++.|+
T Consensus 205 ------~~~l~q~~av~~~---------~~~~~~rDpriravvA~~p~~~~--------------~Fg-~tgl~~v~~P~ 254 (365)
T COG4188 205 ------GRLLNQCAAVWLP---------RQAYDLRDPRIRAVVAINPALGM--------------IFG-TTGLVKVTDPV 254 (365)
T ss_pred ------hhhhccccccccc---------hhhhccccccceeeeeccCCccc--------------ccc-cccceeeecce
Confidence 0000000000000 01111122221111111111000 001 24567889999
Q ss_pred EEEEeCCCcccChH-HHHHHHHHhcCCCceEEEecCCcccccccCCcc
Q 021023 233 IVLHGEEDKVTDKA-VSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEE 279 (318)
Q Consensus 233 lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 279 (318)
+++.|..|.+.|+. .....+..+.+....+..++++.|+-+++-+.+
T Consensus 255 ~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 255 LLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred eeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 99999999987764 344445566444457888999999999865543
No 130
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.49 E-value=6.1e-12 Score=86.15 Aligned_cols=175 Identities=15% Similarity=0.084 Sum_probs=113.8
Q ss_pred eEEEEEccCCcccc-cchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 38 ALIFICHGYAMECS-IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 38 ~~iv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
+.+|++||+.++.. .|...+...+ -.+-.+++.. ......+++++.+.+.+... .++++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l----~~a~rveq~~--------w~~P~~~dWi~~l~~~v~a~-------~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL----PNARRVEQDD--------WEAPVLDDWIARLEKEVNAA-------EGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC----ccchhcccCC--------CCCCCHHHHHHHHHHHHhcc-------CCCeEE
Confidence 45899999988764 3322222222 1233333321 11137888888888887765 456999
Q ss_pred EEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhh
Q 021023 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR 196 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (318)
|+||+|+.+++.++.+....|.|+++++|+-...+......
T Consensus 64 VAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~--------------------------------------- 104 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKH--------------------------------------- 104 (181)
T ss_pred EEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhh---------------------------------------
Confidence 99999999999999887778999999998754321000000
Q ss_pred hCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccC
Q 021023 197 ANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGE 276 (318)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 276 (318)
. ...+. ....++.-|.+++...+|++++++.++.+.+.. ++.++...++||....+.
T Consensus 105 ------------------~-~tf~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~~sG 161 (181)
T COG3545 105 ------------------L-MTFDP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINAESG 161 (181)
T ss_pred ------------------c-cccCC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccchhhc
Confidence 0 00010 112334569999999999999999999999998 467888888999755422
Q ss_pred CccchHHHHHHHHHHHHH
Q 021023 277 PEENTQIVFRDILNWLDE 294 (318)
Q Consensus 277 p~~~~~~~~~~i~~fl~~ 294 (318)
-....+....+.+|+.+
T Consensus 162 -~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 162 -FGPWPEGYALLAQLLSR 178 (181)
T ss_pred -CCCcHHHHHHHHHHhhh
Confidence 12334466666666544
No 131
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.49 E-value=1.5e-11 Score=101.60 Aligned_cols=128 Identities=18% Similarity=0.181 Sum_probs=89.8
Q ss_pred CeeEEEEeecCCC-CCCceEEEEEccCCcccccchhHHH------------------HHHHhcCcEEEEecCC-CCcCCC
Q 021023 21 RVKLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTA------------------IRLANEGYACYGIDYQ-GHGKSA 80 (318)
Q Consensus 21 g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~------------------~~l~~~g~~v~~~d~~-G~G~s~ 80 (318)
+..+.|+.+.... ....|+||+++|+++.+..+ ..+. -.+.+. .+++.+|.| |+|.|.
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~ 137 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSY 137 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCccc
Confidence 5789999887553 35679999999998877643 1111 012222 689999976 888887
Q ss_pred CCCC-CCCChHhHHHHHHHHHHHHHhh-hhccCceEEEEEEchhHHHHHHHHhhC----------CCCcCEEEEeCCCcc
Q 021023 81 GLSG-YIDNFDDLVDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHRKK----------PDYFDGAVLVAPMCK 148 (318)
Q Consensus 81 ~~~~-~~~~~~~~~~d~~~~l~~l~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~ 148 (318)
.... ...+.++.++|+..+++.+.+. +.....+++|+|+|+||..+..+|.+. +-.++++++.++..+
T Consensus 138 ~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 138 ADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 5332 2345678899999999866432 334568999999999999998887542 124789999888775
Q ss_pred cc
Q 021023 149 IA 150 (318)
Q Consensus 149 ~~ 150 (318)
..
T Consensus 218 p~ 219 (462)
T PTZ00472 218 PY 219 (462)
T ss_pred hh
Confidence 53
No 132
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.48 E-value=4.9e-12 Score=89.93 Aligned_cols=183 Identities=17% Similarity=0.054 Sum_probs=115.0
Q ss_pred CceEEEEEccCCcccccc---hhHHHHHHHhcCcEEEEecCCC----CcCCC--C------CC------CCCC-------
Q 021023 36 PKALIFICHGYAMECSIG---MNSTAIRLANEGYACYGIDYQG----HGKSA--G------LS------GYID------- 87 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G----~G~s~--~------~~------~~~~------- 87 (318)
.++-|||+||+-.+...+ ...+.+.|.+. +.++.+|-|- -+.+. + +. ...+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 466799999999988766 24455566555 7888888773 11111 1 00 0000
Q ss_pred -ChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC--------CCcCEEEEeCCCcccccccCCchh
Q 021023 88 -NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP--------DYFDGAVLVAPMCKIAENVKPHPL 158 (318)
Q Consensus 88 -~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--------~~v~~~vl~~~~~~~~~~~~~~~~ 158 (318)
.....-+-+..+.+++.+ +..=-.|+|+|.|+.++..++...+ ..++-+|+++++.....
T Consensus 83 ~~~~~~eesl~yl~~~i~e----nGPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~------- 151 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKE----NGPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK------- 151 (230)
T ss_pred ccccChHHHHHHHHHHHHH----hCCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc-------
Confidence 011112224444445433 2333469999999999999887211 12677788877643310
Q ss_pred HHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeC
Q 021023 159 VISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGE 238 (318)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~ 238 (318)
..+-......+++|.|.|.|+
T Consensus 152 -----------------------------------------------------------~~~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 152 -----------------------------------------------------------KLDESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred -----------------------------------------------------------hhhhhhhccCCCCCeeEEecc
Confidence 011112345689999999999
Q ss_pred CCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhcc
Q 021023 239 EDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT 298 (318)
Q Consensus 239 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~ 298 (318)
.|.++|.+.+..+++.+ ++..+..-+ +||.+.... ...+.+.+|+...+..
T Consensus 173 ~D~iv~~~~s~~L~~~~--~~a~vl~Hp-ggH~VP~~~------~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESF--KDATVLEHP-GGHIVPNKA------KYKEKIADFIQSFLQE 223 (230)
T ss_pred cceeecchHHHHHHHhc--CCCeEEecC-CCccCCCch------HHHHHHHHHHHHHHHh
Confidence 99999999999999999 555444444 789887644 2777888888776644
No 133
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.45 E-value=2.8e-12 Score=95.30 Aligned_cols=167 Identities=20% Similarity=0.131 Sum_probs=81.3
Q ss_pred CceEEEEEccCCcccccc---hhHHHHHHHhcCcEEEEecCCCCc-----CCCC---------CCCCCC----------C
Q 021023 36 PKALIFICHGYAMECSIG---MNSTAIRLANEGYACYGIDYQGHG-----KSAG---------LSGYID----------N 88 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G-----~s~~---------~~~~~~----------~ 88 (318)
.++-||||||++.+...+ ...+...|.+.++.++.+|-|--- -... .....+ .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 467799999999999876 244555554426888888865321 1100 000000 1
Q ss_pred hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh--------CCCCcCEEEEeCCCcccccccCCchhHH
Q 021023 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK--------KPDYFDGAVLVAPMCKIAENVKPHPLVI 160 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 160 (318)
...+.+.+..+.+.+.+ ...-..|+|+|.||.+|..++.. ....++.+|+++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~----~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~------- 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEE----NGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY------- 151 (212)
T ss_dssp G---HHHHHHHHHHHHH----H---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G-------
T ss_pred ccCHHHHHHHHHHHHHh----cCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh-------
Confidence 12222222222233321 23346799999999999988853 123478999998876542110
Q ss_pred HHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCC
Q 021023 161 SVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEED 240 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 240 (318)
.... .-.+|++|+|.|+|++|
T Consensus 152 ----------------------------------------------------------~~~~-~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 152 ----------------------------------------------------------QELY-DEPKISIPTLHVIGEND 172 (212)
T ss_dssp ----------------------------------------------------------TTTT---TT---EEEEEEETT-
T ss_pred ----------------------------------------------------------hhhh-ccccCCCCeEEEEeCCC
Confidence 0000 23557899999999999
Q ss_pred cccChHHHHHHHHHhcCCCceEEEecCCcccccc
Q 021023 241 KVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLY 274 (318)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 274 (318)
.+++++.++.+.+.+... .+++..+ +||.+..
T Consensus 173 ~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP~ 204 (212)
T PF03959_consen 173 PVVPPERSEALAEMFDPD-ARVIEHD-GGHHVPR 204 (212)
T ss_dssp SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS---
T ss_pred CCcchHHHHHHHHhccCC-cEEEEEC-CCCcCcC
Confidence 999999999999998432 5666666 6677665
No 134
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.41 E-value=3.2e-11 Score=87.00 Aligned_cols=266 Identities=15% Similarity=0.108 Sum_probs=146.7
Q ss_pred eecCCeeEEEEeecCC---CCCCceEEEEEccCCcccccchhHHHHHHHhc---CcEEEEecCCCCcCCC---C-----C
Q 021023 17 LNSRRVKLFTCSWIPQ---NQEPKALIFICHGYAMECSIGMNSTAIRLANE---GYACYGIDYQGHGKSA---G-----L 82 (318)
Q Consensus 17 ~~~~g~~l~~~~~~p~---~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~---~-----~ 82 (318)
.+..|..++...++|- .+..++.|+++.|.+|....| ..+++.|... .+.++.+-..||-.-+ . .
T Consensus 6 ~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 6 YTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT 84 (301)
T ss_pred eeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHH-HHHHHHHHHhcccccceeEEeccccccCCcccccccccc
Confidence 3445555554444443 236789999999999999856 8999888654 2558888888875543 1 1
Q ss_pred CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC--CCcCEEEEeCCCcccccccCCchhHH
Q 021023 83 SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP--DYFDGAVLVAPMCKIAENVKPHPLVI 160 (318)
Q Consensus 83 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~~~~~~~ 160 (318)
....++++++++.-.++++...- ...+++++|||.|+++.+.+..... -.|.+++++-|..--.........+.
T Consensus 85 ~~eifsL~~QV~HKlaFik~~~P----k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t 160 (301)
T KOG3975|consen 85 NEEIFSLQDQVDHKLAFIKEYVP----KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLT 160 (301)
T ss_pred cccccchhhHHHHHHHHHHHhCC----CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEee
Confidence 12346788888888888876632 5679999999999999999886432 35778888776543222211111111
Q ss_pred HHHhhhhh---cCCCcccCCChhhhhhh-----hcChhhhHhhhhCCCCcCCccchhh-----HHHHhhhchhHHhhcCc
Q 021023 161 SVLTKLCK---FIPTWKIIPSQDIVDVA-----FKLPEKRKEIRANPYCYKGRPRLKT-----GYELMRVSMDLENRLDE 227 (318)
Q Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 227 (318)
..+..+.. ............+.+.+ +.-..........+........++. ..++........+.+++
T Consensus 161 ~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~ee 240 (301)
T KOG3975|consen 161 KVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEE 240 (301)
T ss_pred eeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHh
Confidence 11111100 00000000000111000 0000000011000000000000000 00111111111233344
Q ss_pred ccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 228 VSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 228 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
-.+-+.+.+|..|..||.+....+.+.++..++++-+ ++..|.+...+ .+.++..+.+.+
T Consensus 241 n~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~----~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 241 NLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKH----AQYMANAVFDMI 300 (301)
T ss_pred cCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecc----cHHHHHHHHHhh
Confidence 4567899999999999999999999999766777777 88999999844 344665555543
No 135
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.39 E-value=5.9e-11 Score=88.38 Aligned_cols=131 Identities=19% Similarity=0.122 Sum_probs=94.0
Q ss_pred EEeecCCeeEEEEeecCCC-CCCceEEEEEccCCcccccchhHHH--HHHHhc-CcEEEEecCCC-------CcCCCCCC
Q 021023 15 FILNSRRVKLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTA--IRLANE-GYACYGIDYQG-------HGKSAGLS 83 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~--~~l~~~-g~~v~~~d~~G-------~G~s~~~~ 83 (318)
....++|.+..|++|.|.. ..+.|.||++||..++.... .... +.|+++ ||-|+.+|--. .+.+.++.
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~ 116 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPA 116 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCcc
Confidence 3445678899999999986 34558999999999887654 3333 445444 99999995322 22221221
Q ss_pred CCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 84 GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 84 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
.. ..-.+-+..+.+++..+..+..++..+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 117 ~~-~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 117 DR-RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cc-cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11 1122346778888888866666677799999999999999999999999999998887765
No 136
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.37 E-value=3.4e-11 Score=85.15 Aligned_cols=182 Identities=16% Similarity=0.122 Sum_probs=119.2
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCC--------C-------C--CCCCCChHhHHHHHHHH
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA--------G-------L--SGYIDNFDDLVDDCFNH 99 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~--------~-------~--~~~~~~~~~~~~d~~~~ 99 (318)
..+||++||.+.+...| ..+++.|.-.....+++.-|-.-.+. . . .....++...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 45799999999999988 77777776566777777555322211 0 0 00112334445555555
Q ss_pred HHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCCh
Q 021023 100 FTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQ 179 (318)
Q Consensus 100 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (318)
++...+ ......++.+-|+|+||.+++..+..+|..+.+++-..+......... +.
T Consensus 82 i~~e~~-~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~----------------~~------- 137 (206)
T KOG2112|consen 82 IDNEPA-NGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGL----------------PG------- 137 (206)
T ss_pred HHHHHH-cCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhc----------------cC-------
Confidence 555422 223456899999999999999999999887888877766543210000 00
Q ss_pred hhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC--
Q 021023 180 DIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS-- 257 (318)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-- 257 (318)
.....+ ..|++..||+.|++||....+...+.+..
T Consensus 138 -----------------------------------------~~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~ 174 (206)
T KOG2112|consen 138 -----------------------------------------WLPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLG 174 (206)
T ss_pred -----------------------------------------CccccC--cchhheecccCCceeehHHHHHHHHHHHHcC
Confidence 000001 57999999999999998876666555532
Q ss_pred CCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 258 SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 258 ~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
..++++.|++.+|.... + =...+..|+.+
T Consensus 175 ~~~~f~~y~g~~h~~~~----~----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 175 VRVTFKPYPGLGHSTSP----Q----ELDDLKSWIKT 203 (206)
T ss_pred CceeeeecCCccccccH----H----HHHHHHHHHHH
Confidence 23789999999998766 1 45677788876
No 137
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.37 E-value=7.8e-11 Score=91.60 Aligned_cols=228 Identities=21% Similarity=0.205 Sum_probs=120.6
Q ss_pred hHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhh---c-cCceEEEEEEchhHHHHHHHH
Q 021023 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEE---N-KEKMRYLLGESMGGAMVLLLH 130 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a 130 (318)
..++..+.++||.|+++|+.|.|.. + ..-...+..+...++..++... . ...++.++|||.||.-++..+
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~-----y-~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTP-----Y-LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCc-----c-cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 4556667789999999999999881 1 1223334444444444432221 1 246899999999999887766
Q ss_pred hh----CCCC---cCEEEEeCCCcccccccCC------chhHHHHHhhhhhcCCCcccCCChhhhhhhhcChh-------
Q 021023 131 RK----KPDY---FDGAVLVAPMCKIAENVKP------HPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPE------- 190 (318)
Q Consensus 131 ~~----~p~~---v~~~vl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 190 (318)
.. -|+. +.+.++.+++.+....... .......+..+....|... ......+....
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~-----~~~~~~l~~~g~~~~~~~ 164 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELD-----ELLDSYLTPEGRALLDDA 164 (290)
T ss_pred HHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHH-----HHHHHHhhHHHHHHHHHH
Confidence 43 2442 6788887777665432211 1111111122222222211 00111111000
Q ss_pred ----hhHhhhhCCCC--------c-CCccchhhHHHHhhhchhHHh---hcCcccccEEEEEeCCCcccChHHHHHHHHH
Q 021023 191 ----KRKEIRANPYC--------Y-KGRPRLKTGYELMRVSMDLEN---RLDEVSIPFIVLHGEEDKVTDKAVSVQLFKV 254 (318)
Q Consensus 191 ----~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~---~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 254 (318)
........... . .....+.....+.....+..- .-...+.|++|.+|..|.++|+.....+.++
T Consensus 165 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~ 244 (290)
T PF03583_consen 165 RTRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAK 244 (290)
T ss_pred HhhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHH
Confidence 00000000000 0 000000000011110011000 1123378999999999999999999998888
Q ss_pred hcC---CCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhccCC
Q 021023 255 ASS---SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGN 300 (318)
Q Consensus 255 ~~~---~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~ 300 (318)
+.. .+++++.+++.+|....-. -......|+.+++....
T Consensus 245 ~c~~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 245 WCAAGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGKP 286 (290)
T ss_pred HHHcCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCCC
Confidence 743 3578888899999865411 34667799999987654
No 138
>PRK04940 hypothetical protein; Provisional
Probab=99.35 E-value=7.3e-11 Score=82.81 Aligned_cols=175 Identities=13% Similarity=0.116 Sum_probs=98.9
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEE
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 119 (318)
||++||+.+++..- ..=++.+. .+.+|.+-+-.+ .......++.+.+.+..+.... ..+++.|||.
T Consensus 2 IlYlHGF~SS~~S~-~~Ka~~l~-----~~~p~~~~~~l~------~~~P~~a~~~l~~~i~~~~~~~--~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGN-HEKVLQLQ-----FIDPDVRLISYS------TLHPKHDMQHLLKEVDKMLQLS--DDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCcc-HHHHHhhe-----eeCCCCeEEECC------CCCHHHHHHHHHHHHHHhhhcc--CCCCcEEEEe
Confidence 89999999998862 11112221 112222222001 0244444455555555431110 1257999999
Q ss_pred chhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCC
Q 021023 120 SMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANP 199 (318)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (318)
|+||+.|..++.++. -..|+++|...+...+ ... + ...
T Consensus 68 SLGGyyA~~La~~~g---~~aVLiNPAv~P~~~L------~~~---i--------------------g~~---------- 105 (180)
T PRK04940 68 GLGGYWAERIGFLCG---IRQVIFNPNLFPEENM------EGK---I--------------------DRP---------- 105 (180)
T ss_pred ChHHHHHHHHHHHHC---CCEEEECCCCChHHHH------HHH---h--------------------CCC----------
Confidence 999999999999986 3678999988663211 000 0 000
Q ss_pred CCcCCccchhhHHHHhhhchhHHhhcC-cccccEEEEEeCCCcccChHHHHHHHHHhcCCCc-eEEEecCCcccccccCC
Q 021023 200 YCYKGRPRLKTGYELMRVSMDLENRLD-EVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDK-TMKLYEGMWHGLLYGEP 277 (318)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p 277 (318)
..+. .+. ....+.+. +-.-..+++..+.|.+.+...+.+.+. +. +..+.+|++|.+.
T Consensus 106 ~~y~---------~~~---~~h~~eL~~~~p~r~~vllq~gDEvLDyr~a~~~y~-----~~y~~~v~~GGdH~f~---- 164 (180)
T PRK04940 106 EEYA---------DIA---TKCVTNFREKNRDRCLVILSRNDEVLDSQRTAEELH-----PYYEIVWDEEQTHKFK---- 164 (180)
T ss_pred cchh---------hhh---HHHHHHhhhcCcccEEEEEeCCCcccCHHHHHHHhc-----cCceEEEECCCCCCCC----
Confidence 0000 000 00001111 112346899999999999987765443 33 6888898888764
Q ss_pred ccchHHHHHHHHHHHH
Q 021023 278 EENTQIVFRDILNWLD 293 (318)
Q Consensus 278 ~~~~~~~~~~i~~fl~ 293 (318)
..++....|.+|+.
T Consensus 165 --~fe~~l~~I~~F~~ 178 (180)
T PRK04940 165 --NISPHLQRIKAFKT 178 (180)
T ss_pred --CHHHHHHHHHHHHh
Confidence 34568888999884
No 139
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.35 E-value=1.9e-11 Score=91.18 Aligned_cols=109 Identities=15% Similarity=0.113 Sum_probs=75.2
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHh--------cCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhh
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLAN--------EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKE 107 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 107 (318)
.+.+|||+||.+++...+ +.++..+.+ ..++++++|+......-.. ..+.+..+.+...++.+.+..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g----~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG----RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHH-HHHHHHHhhhhhhccCccceeEEEeccCcccccccc----ccHHHHHHHHHHHHHHHHHhh
Confidence 356799999999988766 677666522 1488999998765322211 244455555555555553322
Q ss_pred ---hccCceEEEEEEchhHHHHHHHHhhCC---CCcCEEEEeCCCccc
Q 021023 108 ---ENKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKI 149 (318)
Q Consensus 108 ---~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~ 149 (318)
..+.++++++||||||.+|..++...+ +.|+.+|.++++...
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 336789999999999999988876533 579999999877654
No 140
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.33 E-value=9e-11 Score=110.99 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=83.9
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
.++++++||++++...| ..+++.|.. ++.|+.++.+|++.+.. ..++++++++++.+.++.+. ...++++
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~-----~~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQ-----PHGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhC-----CCCCEEE
Confidence 46799999999998877 999998955 59999999999986532 22589999999999888761 2458999
Q ss_pred EEEchhHHHHHHHHhh---CCCCcCEEEEeCCCc
Q 021023 117 LGESMGGAMVLLLHRK---KPDYFDGAVLVAPMC 147 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 147 (318)
+||||||.+|..+|.+ .++++..++++++..
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999999999985 577899999998754
No 141
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.30 E-value=1.2e-09 Score=83.40 Aligned_cols=115 Identities=23% Similarity=0.283 Sum_probs=84.8
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccch-----hHHHHHHH-hcCcEEEEecCCCCcCCCCCCCCCCC
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGM-----NSTAIRLA-NEGYACYGIDYQGHGKSAGLSGYIDN 88 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~-----~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~ 88 (318)
..+..|+..|-.....-++.++...||+.-|.++.-+... ......++ ..|.+|+.+++||.|.|.+.. +
T Consensus 115 v~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s 190 (365)
T PF05677_consen 115 VPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----S 190 (365)
T ss_pred EEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----C
Confidence 3444588888766654333467789999999887655410 12223333 348999999999999998774 5
Q ss_pred hHhHHHHHHHHHHHHHhhh-hccCceEEEEEEchhHHHHHHHHhhC
Q 021023 89 FDDLVDDCFNHFTSICEKE-ENKEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
.++++.|..+.+++++++. ..+.+++++.|||+||.++..++.++
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 7999999999999996543 33668999999999999998866654
No 142
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.29 E-value=3.1e-10 Score=84.85 Aligned_cols=112 Identities=13% Similarity=0.243 Sum_probs=77.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCC----CCC--CC--C--------------------
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA----GLS--GY--I-------------------- 86 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~----~~~--~~--~-------------------- 86 (318)
+.-|+|||-||++++...| ..++-.|+++||.|.+++.|-+..+. .+. .. .
T Consensus 116 ~k~PvvvFSHGLggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 5679999999999999977 99999999999999999998765432 000 00 0
Q ss_pred CChHhHHHHHHHHHHHHHhhh---------------------hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCC
Q 021023 87 DNFDDLVDDCFNHFTSICEKE---------------------ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~---------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (318)
.....-++++..+++-+.+.. ..+..++.++|||+||..++.....+.+ ++..|+++.
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeee
Confidence 001122444555544442211 1233568899999999999888877654 888888877
Q ss_pred Ccc
Q 021023 146 MCK 148 (318)
Q Consensus 146 ~~~ 148 (318)
+..
T Consensus 274 WM~ 276 (399)
T KOG3847|consen 274 WMF 276 (399)
T ss_pred eec
Confidence 654
No 143
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.27 E-value=4.8e-10 Score=84.18 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=84.4
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEE
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 117 (318)
|+++++||.++....| ..++..|... ..|+..+.||.+.-... ..+++++++...+.|..+ + +..+++|+
T Consensus 1 ~pLF~fhp~~G~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~--Q---P~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRV--Q---PEGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHHH-HHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHh--C---CCCCEEEE
Confidence 4699999999999888 9999999777 99999999999863222 248899988888888777 3 56799999
Q ss_pred EEchhHHHHHHHHhh---CCCCcCEEEEeCCCcc
Q 021023 118 GESMGGAMVLLLHRK---KPDYFDGAVLVAPMCK 148 (318)
Q Consensus 118 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 148 (318)
|||+||.+|..+|.+ ..+.|..++++++...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999975 3346999999998877
No 144
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.27 E-value=2e-10 Score=80.83 Aligned_cols=128 Identities=16% Similarity=0.216 Sum_probs=84.5
Q ss_pred CCeeEEEEeecCCC---CCCceEEEEEccCCcccccch--hHHHHHHHhcCcEEEEecCCCCcCCC--CCCCC-------
Q 021023 20 RRVKLFTCSWIPQN---QEPKALIFICHGYAMECSIGM--NSTAIRLANEGYACYGIDYQGHGKSA--GLSGY------- 85 (318)
Q Consensus 20 ~g~~l~~~~~~p~~---~~~~~~iv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~--~~~~~------- 85 (318)
-+..+.+-+|.|+. +++-|++.++.|+.++.+.+. ..+.+..+++|+.|+.+|---.|..- ....+
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 35788888998875 345689999999999988763 23334455679999999964433211 00000
Q ss_pred ---CCChHhH----------HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 86 ---IDNFDDL----------VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 86 ---~~~~~~~----------~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
..+.+-| .+++.+++..- ....+..++.+.||||||.=|+..+.++|.+.+++-..+|.+..
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccc--cccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 0011112 22333333211 22335668999999999999999999999999998888887765
No 145
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.25 E-value=1e-10 Score=95.13 Aligned_cols=246 Identities=13% Similarity=0.110 Sum_probs=154.6
Q ss_pred CCccceEEEeecCCeeEEEEeecCCC--CCCceEEEEEccCCcccc--cchhHHHHHHHhcCcEEEEecCCCCcCCCCC-
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECS--IGMNSTAIRLANEGYACYGIDYQGHGKSAGL- 82 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~- 82 (318)
.+..++...++.||++|+|.+.. ++ ..++|++|+--|...-+. .| ......+.++|...+..+.||=|.-...
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsltP~f-s~~~~~WLerGg~~v~ANIRGGGEfGp~W 468 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVR-KGAKKDENPTLLYAYGGFNISLTPRF-SGSRKLWLERGGVFVLANIRGGGEFGPEW 468 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEe-cCCcCCCCceEEEeccccccccCCcc-chhhHHHHhcCCeEEEEecccCCccCHHH
Confidence 45677777888899999999996 32 236787776665433221 23 4555777799999999999997765421
Q ss_pred --CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHH
Q 021023 83 --SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVI 160 (318)
Q Consensus 83 --~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 160 (318)
.....+-....+|..++.+.|.++.....+++.+.|-|-||.+.-....++|+.+.++|+-.|..++...-..
T Consensus 469 H~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l----- 543 (648)
T COG1505 469 HQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLL----- 543 (648)
T ss_pred HHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhccc-----
Confidence 1111244556789999999998776667789999999999999999999999999999988887766311000
Q ss_pred HHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcC--cccccEEEEEeC
Q 021023 161 SVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLD--EVSIPFIVLHGE 238 (318)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~lii~G~ 238 (318)
...+ .++. -+.++.. ......+.....+ ..++ ..-.|+||-.+.
T Consensus 544 ---------~aG~------sW~~-EYG~Pd~-----------------P~d~~~l~~YSPy-~nl~~g~kYP~~LITTs~ 589 (648)
T COG1505 544 ---------TAGS------SWIA-EYGNPDD-----------------PEDRAFLLAYSPY-HNLKPGQKYPPTLITTSL 589 (648)
T ss_pred ---------ccch------hhHh-hcCCCCC-----------------HHHHHHHHhcCch-hcCCccccCCCeEEEccc
Confidence 0000 0000 0111110 0111111111111 1121 123589999999
Q ss_pred CCcccChHHHHHHHHHhcCCCceEEEe--cCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 239 EDKVTDKAVSVQLFKVASSSDKTMKLY--EGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 239 ~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
+|.-|.|..+++++.++...+.....+ .++||..--... ....-...+..||.+.+
T Consensus 590 ~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~--~~A~~~a~~~afl~r~L 647 (648)
T COG1505 590 HDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTA--EIARELADLLAFLLRTL 647 (648)
T ss_pred ccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChH--HHHHHHHHHHHHHHHhh
Confidence 999999999999998886533444333 568998765322 22234455667776654
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.25 E-value=1.5e-11 Score=96.68 Aligned_cols=115 Identities=11% Similarity=0.090 Sum_probs=75.2
Q ss_pred CCceEEEEEccCCccc--ccchhHHHHHHHhc---CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhc
Q 021023 35 EPKALIFICHGYAMEC--SIGMNSTAIRLANE---GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEEN 109 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~--~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 109 (318)
..+|++|++|||.++. ..|...+.+.+..+ +++|+++||...-...-. ..........+.+..+|..|......
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~-~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYP-QAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HH-HHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccccc-chhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5689999999999887 45667777765454 799999999643221100 00012344566677777777655566
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCC--CcCEEEEeCCCcccc
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKIA 150 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~ 150 (318)
..++++|||||+||++|-.++..... +|..++.++|+....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 88999999999999999999988776 899999999987653
No 147
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.21 E-value=2.3e-08 Score=81.59 Aligned_cols=124 Identities=14% Similarity=0.104 Sum_probs=76.8
Q ss_pred CCeeEEEEeecCCC--CCCceEEEEEccCCcccccchhHHHHHHHhcC----cEEEEecCCCCcCCCCCCCCCCChHhH-
Q 021023 20 RRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNSTAIRLANEG----YACYGIDYQGHGKSAGLSGYIDNFDDL- 92 (318)
Q Consensus 20 ~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~~~~~~~~~~~- 92 (318)
-|....+.+|.|.+ .++.|+|+++||-...........+..|...| ..++.+|..+.. .+.... .....+
T Consensus 190 Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~el-~~~~~f~ 266 (411)
T PRK10439 190 LGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQEL-PCNADFW 266 (411)
T ss_pred cCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cccccC-CchHHHH
Confidence 45677888888864 24579999999965332222245556666666 346777753211 111111 111222
Q ss_pred ---HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 93 ---VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 93 ---~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
++++.-.|+..- ....+.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 267 ~~l~~eLlP~I~~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIA-PFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhC-CCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 334433333320 011245678999999999999999999999999999999864
No 148
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.20 E-value=3e-08 Score=77.84 Aligned_cols=209 Identities=17% Similarity=0.227 Sum_probs=127.5
Q ss_pred ceEEEeecCCeeEEEEeecCC-CCCCceEEEEEccCCccccc--chhHHHHHHHhcCcEEEEecCCCC--cCCC------
Q 021023 12 DEEFILNSRRVKLFTCSWIPQ-NQEPKALIFICHGYAMECSI--GMNSTAIRLANEGYACYGIDYQGH--GKSA------ 80 (318)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~p~-~~~~~~~iv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~--G~s~------ 80 (318)
.+......++.+.-. +|.|. .+.++..||++||.+.+... ...++.+.|.+.||.++++.+|.- ....
T Consensus 62 ~e~~~L~~~~~~fla-L~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 62 DEVQWLQAGEERFLA-LWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred hhcEEeecCCEEEEE-EEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 444555555544443 34454 34677899999999988761 246777788889999999998871 1000
Q ss_pred ------CCCC-CC-------------CCh----HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC-
Q 021023 81 ------GLSG-YI-------------DNF----DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD- 135 (318)
Q Consensus 81 ------~~~~-~~-------------~~~----~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~- 135 (318)
+... .. ... +.+..-+.+++..+..+ +..+++|+||+.|+..++.+....+.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 0000 00 011 22333444555554332 55669999999999999999988764
Q ss_pred CcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHh
Q 021023 136 YFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELM 215 (318)
Q Consensus 136 ~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
.++++|++++.......
T Consensus 218 ~~daLV~I~a~~p~~~~--------------------------------------------------------------- 234 (310)
T PF12048_consen 218 MPDALVLINAYWPQPDR--------------------------------------------------------------- 234 (310)
T ss_pred ccCeEEEEeCCCCcchh---------------------------------------------------------------
Confidence 48999999987543110
Q ss_pred hhchhHHhhcCcccccEEEEEeCCCcccChHHHH---HHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHH
Q 021023 216 RVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSV---QLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 216 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
...+.+.+.++++|||=|++.....+ ...+. ...++....+-+-+.+.+..|...- ..+.+.+.|..||
T Consensus 235 --n~~l~~~la~l~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-----~~~~l~~rIrGWL 306 (310)
T PF12048_consen 235 --NPALAEQLAQLKIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-----WQEQLLRRIRGWL 306 (310)
T ss_pred --hhhHHHHhhccCCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChhh-----HHHHHHHHHHHHH
Confidence 02344667788999999998873322 22111 1222222234455566666554432 2234999999999
Q ss_pred HHH
Q 021023 293 DER 295 (318)
Q Consensus 293 ~~~ 295 (318)
.++
T Consensus 307 ~~~ 309 (310)
T PF12048_consen 307 KRH 309 (310)
T ss_pred Hhh
Confidence 865
No 149
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=3.4e-10 Score=92.71 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=103.9
Q ss_pred CCccceEEEeecCCeeEEEEeecCCC---CCCceEEEEEccCCccc-ccchhHHHHHHHhcCcEEEEecCCCCcCCC---
Q 021023 8 NIKYDEEFILNSRRVKLFTCSWIPQN---QEPKALIFICHGYAMEC-SIGMNSTAIRLANEGYACYGIDYQGHGKSA--- 80 (318)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~--- 80 (318)
.+..+...+.+.||+.+...+....+ .+++|.+|..+|.-+-+ ...|..-...|.++|+.....|.||=|.-.
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccch
Confidence 34566778888999988877765432 35778877777644322 212233334455789999999999976544
Q ss_pred CCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 81 GLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 81 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
...+....-....+|+.+..++|.++......+..+.|.|.||.++..++..+|+.+.++|+-.|+.+..
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL 587 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVL 587 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehh
Confidence 2222222334457788888888877777778899999999999999999999999999999999888763
No 150
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.14 E-value=1.3e-08 Score=84.60 Aligned_cols=129 Identities=21% Similarity=0.170 Sum_probs=86.0
Q ss_pred CCeeEEEEeecCCC-CCCceEEEEEccCCcccccchhHHHH-------------------HHHhcCcEEEEecCC-CCcC
Q 021023 20 RRVKLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTAI-------------------RLANEGYACYGIDYQ-GHGK 78 (318)
Q Consensus 20 ~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d~~-G~G~ 78 (318)
.+..+.|+.+...+ ...+|+||++.|+++++..+ ..+.+ .+.+. .+++.+|.| |.|.
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGf 99 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGF 99 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccccccccc-cceEEEeecCceEE
Confidence 57899999886654 36679999999999887754 22111 11122 689999966 8999
Q ss_pred CCCCCCC--CCChHhHHHHHHHHHHHHHh-hhhccCceEEEEEEchhHHHHHHHHhh----C------CCCcCEEEEeCC
Q 021023 79 SAGLSGY--IDNFDDLVDDCFNHFTSICE-KEENKEKMRYLLGESMGGAMVLLLHRK----K------PDYFDGAVLVAP 145 (318)
Q Consensus 79 s~~~~~~--~~~~~~~~~d~~~~l~~l~~-~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~~vl~~~ 145 (318)
|...... ..+.++.++|+..+|..... .++....+++|.|.|+||..+..+|.. . +-.++|+++.+|
T Consensus 100 S~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng 179 (415)
T PF00450_consen 100 SYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNG 179 (415)
T ss_dssp -EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE
T ss_pred eeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCc
Confidence 8754432 34778889999988876643 345566799999999999887777642 2 234889999999
Q ss_pred Ccccc
Q 021023 146 MCKIA 150 (318)
Q Consensus 146 ~~~~~ 150 (318)
..+..
T Consensus 180 ~~dp~ 184 (415)
T PF00450_consen 180 WIDPR 184 (415)
T ss_dssp -SBHH
T ss_pred ccccc
Confidence 87764
No 151
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.14 E-value=7.8e-11 Score=86.49 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=56.3
Q ss_pred eEEEEEccCCc-ccccchhHHHHHHHhcCcE---EEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCce
Q 021023 38 ALIFICHGYAM-ECSIGMNSTAIRLANEGYA---CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (318)
Q Consensus 38 ~~iv~~hG~~~-~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 113 (318)
.+|||+||.++ ....| ..+++.|.++||. ++++++-........... ....+.+.++.++|+.+++ ..+. +
T Consensus 2 ~PVVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~--~TGa-k 76 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLA--YTGA-K 76 (219)
T ss_dssp --EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHH--HHT---
T ss_pred CCEEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHH--hhCC-E
Confidence 35999999998 45567 9999999999999 899998544332211100 1123445778888887743 3366 9
Q ss_pred EEEEEEchhHHHHHHHHhhC
Q 021023 114 RYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~ 133 (318)
|-||||||||.++..+....
T Consensus 77 VDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 77 VDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEcCCcCHHHHHHHHHc
Confidence 99999999999998887643
No 152
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.12 E-value=3.7e-09 Score=87.41 Aligned_cols=144 Identities=13% Similarity=0.178 Sum_probs=99.7
Q ss_pred CccceEEEeecCCeeEEEEeecCCC---CCCceEEEEEccCCccc-ccchhHHHHHHHhcCcEEEEecCCCCcCCCCC--
Q 021023 9 IKYDEEFILNSRRVKLFTCSWIPQN---QEPKALIFICHGYAMEC-SIGMNSTAIRLANEGYACYGIDYQGHGKSAGL-- 82 (318)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-- 82 (318)
+..+.......||+.+...+..-.+ .+++|++|..-|.-+.+ ...|....-.|.++||.....-.||=|.-...
T Consensus 417 Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WY 496 (682)
T COG1770 417 YVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWY 496 (682)
T ss_pred eEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHH
Confidence 3444555555899888877765432 36778888877754432 22335455567789998888888887665421
Q ss_pred -CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccc
Q 021023 83 -SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAEN 152 (318)
Q Consensus 83 -~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 152 (318)
.+....-..-..|+.+..++|.+......+.++++|-|.||++...++...|+.++++|+-.|+++....
T Consensus 497 e~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltT 567 (682)
T COG1770 497 EDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTT 567 (682)
T ss_pred HhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhh
Confidence 1111112223456777777776655556779999999999999999999999999999999999887543
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.09 E-value=1.7e-09 Score=81.29 Aligned_cols=113 Identities=18% Similarity=0.192 Sum_probs=76.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCc--EEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGY--ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
+.+.++||+||+..+...-....++.....++ .++.+.||..|.-..-.....+.......+..+|..+.. ..+..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~--~~~~~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLAR--APGIK 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh--ccCCc
Confidence 56789999999998755332333333333333 799999998876332111112444556677778877732 33678
Q ss_pred eEEEEEEchhHHHHHHHHhh----CC-----CCcCEEEEeCCCccc
Q 021023 113 MRYLLGESMGGAMVLLLHRK----KP-----DYFDGAVLVAPMCKI 149 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~----~p-----~~v~~~vl~~~~~~~ 149 (318)
+|++++||||+.+.+..... .+ .++..+++++|-.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999887643 21 367899999987765
No 154
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.06 E-value=1.5e-07 Score=76.15 Aligned_cols=89 Identities=16% Similarity=0.254 Sum_probs=68.2
Q ss_pred hHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC
Q 021023 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
..+...| ..|+.|+.+.+.-. +....++++.+....++++.+..... +..+.+|+|.|.||..++.+|+.+|
T Consensus 91 SevG~AL-~~GHPvYFV~F~p~------P~pgQTl~DV~~ae~~Fv~~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 91 SEVGVAL-RAGHPVYFVGFFPE------PEPGQTLEDVMRAEAAFVEEVAERHP-DAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred cHHHHHH-HcCCCeEEEEecCC------CCCCCcHHHHHHHHHHHHHHHHHhCC-CCCCceEEeccHHHHHHHHHHhcCc
Confidence 4455556 56999998877522 22225888888888888888854433 2238999999999999999999999
Q ss_pred CCcCEEEEeCCCccccc
Q 021023 135 DYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 135 ~~v~~~vl~~~~~~~~~ 151 (318)
+.+.-+|+.+++...+.
T Consensus 163 d~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 163 DLVGPLVLAGAPLSYWA 179 (581)
T ss_pred CccCceeecCCCccccc
Confidence 99999999988887765
No 155
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.04 E-value=1.2e-09 Score=88.99 Aligned_cols=92 Identities=20% Similarity=0.267 Sum_probs=72.4
Q ss_pred chhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 53 GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 53 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
+|..+++.|.+.||.+ ..|++|+|.+.+.. ...++..+++.++++.+.+ ..+..+++|+||||||.++..++..
T Consensus 109 ~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~--~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 109 YFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYK--ASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHH--HcCCCCEEEEEECHhHHHHHHHHHH
Confidence 3489999999999865 88999999987542 2356667788888877732 3367899999999999999999988
Q ss_pred CCC----CcCEEEEeCCCcccc
Q 021023 133 KPD----YFDGAVLVAPMCKIA 150 (318)
Q Consensus 133 ~p~----~v~~~vl~~~~~~~~ 150 (318)
+|+ .|+++|.++++....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCC
Confidence 875 478999998876543
No 156
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.04 E-value=2.7e-09 Score=81.13 Aligned_cols=130 Identities=20% Similarity=0.173 Sum_probs=86.8
Q ss_pred eEEEeecCCeeEEEEee--cCC-CCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCCh
Q 021023 13 EEFILNSRRVKLFTCSW--IPQ-NQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNF 89 (318)
Q Consensus 13 ~~~~~~~~g~~l~~~~~--~p~-~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 89 (318)
...+.+.||..|..... .|. .+..+..|||+-|..+--+. .++..=++.||.|+.++.||++.|.+.+....+.
T Consensus 216 R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~ 292 (517)
T KOG1553|consen 216 RLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTL 292 (517)
T ss_pred EEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcccch
Confidence 34556666655544333 122 23456788888886655442 2222233569999999999999999876553333
Q ss_pred HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 90 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
.. +.++++.....-.+..+.|++.|+|.||.-++.+|..+|+ |+++|+-+++-+..
T Consensus 293 nA----~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDll 348 (517)
T KOG1553|consen 293 NA----ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLL 348 (517)
T ss_pred HH----HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhh
Confidence 22 2233333322334467899999999999999999999998 99999998876653
No 157
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.04 E-value=7e-09 Score=79.98 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=76.8
Q ss_pred CeeEEEEeecCCC---CCCceEEEEEccCCcccccc-hhHHHHHHHhcC----cEEEEecCCCCcCCCC----------C
Q 021023 21 RVKLFTCSWIPQN---QEPKALIFICHGYAMECSIG-MNSTAIRLANEG----YACYGIDYQGHGKSAG----------L 82 (318)
Q Consensus 21 g~~l~~~~~~p~~---~~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g----~~v~~~d~~G~G~s~~----------~ 82 (318)
|....+.+|.|.+ .++-|+|+++||.......+ .......+...| ..+++++..+.+.... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 5677888888876 46679999999972222111 123333344432 4566667655541110 0
Q ss_pred CCCCCChHhHHHHH-HHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 83 SGYIDNFDDLVDDC-FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 83 ~~~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
.........+.+.+ .+++.++.++-.....+..|+|+||||..|+.++.++|+.+.+++.++|....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 00111122222222 23344443332223333899999999999999999999999999999987654
No 158
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.01 E-value=5.3e-08 Score=71.03 Aligned_cols=204 Identities=19% Similarity=0.176 Sum_probs=123.4
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcC-----cEEEEecCCCC----cCCCC----C------CCCCCChHhHHHHHHH
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEG-----YACYGIDYQGH----GKSAG----L------SGYIDNFDDLVDDCFN 98 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~----~------~~~~~~~~~~~~d~~~ 98 (318)
-+.||+||.+++.+.. ..++..|...+ --++.+|--|. |.-+. + .....+..++...+..
T Consensus 46 iPTIfIhGsgG~asS~-~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTASSL-NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChhHH-HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3578999999999977 88888887763 23566666552 11110 0 1112356677889999
Q ss_pred HHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC-----CcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCc
Q 021023 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD-----YFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTW 173 (318)
Q Consensus 99 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (318)
++.+| +..++..++.++||||||.-...++..+.. .+..+|.++++... ....+..
T Consensus 125 ~msyL--~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~-~~l~~de---------------- 185 (288)
T COG4814 125 AMSYL--QKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNV-GNLVPDE---------------- 185 (288)
T ss_pred HHHHH--HHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccc-cccCCCc----------------
Confidence 99999 677789999999999999999999876431 38889988877651 1111100
Q ss_pred ccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHH-hhcCcc--cccEEEEEeCCC------cccC
Q 021023 174 KIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLE-NRLDEV--SIPFIVLHGEED------KVTD 244 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i--~~P~lii~G~~D------~~~~ 244 (318)
...+-....+. ..-... .++. .....+ ..-+|+|.|+-| -.||
T Consensus 186 ------~v~~v~~~~~~---------------~~~t~y-------~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp 237 (288)
T COG4814 186 ------TVTDVLKDGPG---------------LIKTPY-------YDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVP 237 (288)
T ss_pred ------chheeeccCcc---------------ccCcHH-------HHHHHhcceeCCCCcEEEEEecccccCCcCCCcee
Confidence 00000000000 000000 0111 111112 457899999854 4677
Q ss_pred hHHHHHHHHHhcCCCceEE--Ee--cCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 245 KAVSVQLFKVASSSDKTMK--LY--EGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~--~~--~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
...+......+......++ ++ +++.|.-+.|.|. +.+.+..||-+
T Consensus 238 ~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~-----v~~yv~~FLw~ 286 (288)
T COG4814 238 WASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPT-----VAKYVKNFLWE 286 (288)
T ss_pred chHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChh-----HHHHHHHHhhc
Confidence 7777776666644322222 33 4578998887774 88888888853
No 159
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.96 E-value=2.8e-08 Score=81.20 Aligned_cols=188 Identities=15% Similarity=0.099 Sum_probs=120.3
Q ss_pred CceEEEEEccCC--cccccchhHHHHHHHhcC--cEEEEecCCCC-cCCCCCCCCCCChHhHHHHHHHHHHHH--Hhhhh
Q 021023 36 PKALIFICHGYA--MECSIGMNSTAIRLANEG--YACYGIDYQGH-GKSAGLSGYIDNFDDLVDDCFNHFTSI--CEKEE 108 (318)
Q Consensus 36 ~~~~iv~~hG~~--~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~l--~~~~~ 108 (318)
..|.++++||.+ .....|+..+-..|...| ..+..+|++.- |. .++...++.+..+.++. .....
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhcc
Confidence 468899999988 222223233434443333 55667777632 21 26666666666666632 22445
Q ss_pred ccCceEEEEEEchhHHHHHHHHhhCC-CCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhc
Q 021023 109 NKEKMRYLLGESMGGAMVLLLHRKKP-DYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFK 187 (318)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (318)
+...+|+|+|.|||+.++..+...+. ..|.++|+++=+........
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr--------------------------------- 293 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR--------------------------------- 293 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc---------------------------------
Confidence 57789999999999888888776543 23788888875443311000
Q ss_pred ChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecC
Q 021023 188 LPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEG 267 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
....+.+-.++.|+|+|.|..|..+++...+++.+++. ...+++++.+
T Consensus 294 -------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-A~~elhVI~~ 341 (784)
T KOG3253|consen 294 -------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-AEVELHVIGG 341 (784)
T ss_pred -------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-ccceEEEecC
Confidence 00113344567899999999999999999999999987 4578999999
Q ss_pred CcccccccC-----CccchHHHHHHHHHHHHHHh
Q 021023 268 MWHGLLYGE-----PEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 268 ~gH~~~~~~-----p~~~~~~~~~~i~~fl~~~~ 296 (318)
++|.+-... ....+.++...+.+|+.+..
T Consensus 342 adhsmaipk~k~esegltqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 342 ADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFV 375 (784)
T ss_pred CCccccCCccccccccccHHHHHHHHHHHHHHHH
Confidence 999876532 11234445555555555444
No 160
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.93 E-value=5e-08 Score=73.11 Aligned_cols=96 Identities=17% Similarity=0.093 Sum_probs=67.4
Q ss_pred EEccCC--cccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEE
Q 021023 42 ICHGYA--MECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (318)
Q Consensus 42 ~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 119 (318)
++|+.+ ++...| ..+...|.. ++.++.++.+|++.+.... .+++..++.....+... ....+++++||
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~-----~~~~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPHEY-ARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRA-----AGGRPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHHHH-HHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHh-----cCCCCeEEEEE
Confidence 445533 444546 888888865 5999999999998654322 35666666555444332 14678999999
Q ss_pred chhHHHHHHHHhh---CCCCcCEEEEeCCCc
Q 021023 120 SMGGAMVLLLHRK---KPDYFDGAVLVAPMC 147 (318)
Q Consensus 120 S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 147 (318)
|+||.++..++.+ .+..+.+++++++..
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 9999999988875 456689998887654
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=98.92 E-value=1.8e-07 Score=63.77 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=63.2
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEE
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 119 (318)
||++||+.++....-..+...+... |.|-.+.+..... .+....++.+.+++... +.+...|+|.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~l~--h~p~~a~~ele~~i~~~------~~~~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPHLP--HDPQQALKELEKAVQEL------GDESPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCCCC--CCHHHHHHHHHHHHHHc------CCCCceEEee
Confidence 8999999998876522222222222 2222233322222 37888899999999888 6677999999
Q ss_pred chhHHHHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 120 SMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
|+||+.|..++.++. ++ .|+++|.....
T Consensus 67 sLGGY~At~l~~~~G--ir-av~~NPav~P~ 94 (191)
T COG3150 67 SLGGYYATWLGFLCG--IR-AVVFNPAVRPY 94 (191)
T ss_pred cchHHHHHHHHHHhC--Ch-hhhcCCCcCch
Confidence 999999999999875 33 45677776553
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.89 E-value=3.3e-08 Score=70.54 Aligned_cols=108 Identities=14% Similarity=0.060 Sum_probs=79.4
Q ss_pred ceEEEEEccCCccc--ccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceE
Q 021023 37 KALIFICHGYAMEC--SIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 37 ~~~iv~~hG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 114 (318)
+-.|||+-|++..- ..|...+..+|.+.+|.++-+.++.+-.- -...++.+-++|+..+++++. .......|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G----~Gt~slk~D~edl~~l~~Hi~--~~~fSt~v 109 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNG----YGTFSLKDDVEDLKCLLEHIQ--LCGFSTDV 109 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccc----cccccccccHHHHHHHHHHhh--ccCcccce
Confidence 45689999888653 33557888999899999999987633111 111477788999999999882 21123489
Q ss_pred EEEEEchhHHHHHHHHh--hCCCCcCEEEEeCCCcccc
Q 021023 115 YLLGESMGGAMVLLLHR--KKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~--~~p~~v~~~vl~~~~~~~~ 150 (318)
+|+|||-|+.-.+.+.. ..+..+.+.|+.+|..+..
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999998888873 2456688889999988765
No 163
>PLN02209 serine carboxypeptidase
Probab=98.89 E-value=1.5e-06 Score=71.55 Aligned_cols=128 Identities=17% Similarity=0.159 Sum_probs=82.9
Q ss_pred CCeeEEEEeecCCC-CCCceEEEEEccCCcccccchhHHH---H--------------------HHHhcCcEEEEecCC-
Q 021023 20 RRVKLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTA---I--------------------RLANEGYACYGIDYQ- 74 (318)
Q Consensus 20 ~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~---~--------------------~l~~~g~~v~~~d~~- 74 (318)
.+..+.|+.+.... ....|+|+++.|+++.+..+ ..+. + .+.+. .+++.+|.|
T Consensus 50 ~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPv 127 (437)
T PLN02209 50 ENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQPV 127 (437)
T ss_pred CCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecCCC
Confidence 36778888776553 24579999999998877644 1111 0 11122 689999955
Q ss_pred CCcCCCCCCC-CCCChHhHHHHHHHHHHHHH-hhhhccCceEEEEEEchhHHHHHHHHhh----C------CCCcCEEEE
Q 021023 75 GHGKSAGLSG-YIDNFDDLVDDCFNHFTSIC-EKEENKEKMRYLLGESMGGAMVLLLHRK----K------PDYFDGAVL 142 (318)
Q Consensus 75 G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~-~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~~vl 142 (318)
|.|.|-.... ...+-++.++|+..++.... ..++....+++|.|.|+||..+..+|.. . +-.++|+++
T Consensus 128 GtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~i 207 (437)
T PLN02209 128 GSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVL 207 (437)
T ss_pred CCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEe
Confidence 8888863322 11233445677777776653 2344456689999999999877766642 1 124789999
Q ss_pred eCCCccc
Q 021023 143 VAPMCKI 149 (318)
Q Consensus 143 ~~~~~~~ 149 (318)
.++..+.
T Consensus 208 gng~td~ 214 (437)
T PLN02209 208 GNPITHI 214 (437)
T ss_pred cCcccCh
Confidence 9987765
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.88 E-value=2.3e-07 Score=73.21 Aligned_cols=117 Identities=17% Similarity=0.267 Sum_probs=76.0
Q ss_pred EEeec-CCC--CCCceEEEEEccCCcccccc------hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHH
Q 021023 26 TCSWI-PQN--QEPKALIFICHGYAMECSIG------MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96 (318)
Q Consensus 26 ~~~~~-p~~--~~~~~~iv~~hG~~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 96 (318)
+++.. |.. .+..|+||++||+|-.-... +..+...| + ...+++.|+.-..... .+ ..+..+..++
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~--~~--~~yPtQL~ql 181 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDE--HG--HKYPTQLRQL 181 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEecccccccc--CC--CcCchHHHHH
Confidence 44444 543 23569999999988554433 12222233 3 4688999987543111 11 2455566777
Q ss_pred HHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh--C---CCCcCEEEEeCCCcccc
Q 021023 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK--K---PDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 97 ~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~---p~~v~~~vl~~~~~~~~ 150 (318)
.+..+++.+. .+.++|+|+|-|.||.+++.+... . ....+++|+++|++...
T Consensus 182 v~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 182 VATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 7777777522 267899999999999999988743 1 12368999999998775
No 165
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.87 E-value=1.7e-07 Score=74.25 Aligned_cols=252 Identities=18% Similarity=0.154 Sum_probs=131.7
Q ss_pred eeEEEEeecCCCC---CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCC---------CCh
Q 021023 22 VKLFTCSWIPQNQ---EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYI---------DNF 89 (318)
Q Consensus 22 ~~l~~~~~~p~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---------~~~ 89 (318)
..+...++.|... .+.|.+++.||+++..... ...+..++..++.++..+...+|.+....... ...
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQS-LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCc-chHHHHhhhceeEEeeeccccccccccccccccCccccccccch
Confidence 4566677777753 4578899999999998866 55778888888888888763333322111000 000
Q ss_pred HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC--CcCEEEEeCCCcccccccCCchh-HHHHHhhh
Q 021023 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKIAENVKPHPL-VISVLTKL 166 (318)
Q Consensus 90 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~ 166 (318)
.........++..-.........+....|.++|+..+..++...+. ....++.++.............. ........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~ 189 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELI 189 (299)
T ss_pred hheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhh
Confidence 0000000000000000001134788999999999999988887662 23334444333222111110000 00000000
Q ss_pred hhcCCCcccCCChhhhhhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccc-ccEEEEEeCCCcccCh
Q 021023 167 CKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVS-IPFIVLHGEEDKVTDK 245 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~lii~G~~D~~~~~ 245 (318)
............ ........ ..... .......+....+.++. +|+|+++|..|..+|.
T Consensus 190 ~~~~~~~~~~~~-----------------~~~~~~~~-~~~~~---~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~ 248 (299)
T COG1073 190 DYLITPGGFAPL-----------------PAPEAPLD-TLPLR---AVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPL 248 (299)
T ss_pred hhhccCCCCCCC-----------------Cccccccc-ccccc---hhhhccCcchhhHhhcCCcceEEEecCCCcccch
Confidence 000000000000 00000000 00000 00011123334445555 7999999999999999
Q ss_pred HHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 246 AVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
..+..++........+..++++++|......+ ...++....+.+|+.+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 249 RDAEDLYEAARERPKKLLFVPGGGHIDLYDNP-PAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhhHHHHhhhccCCceEEEecCCccccccCcc-HHHHHHHHHHHHHHHHhc
Confidence 99999998886434678888999998886332 334568889999998764
No 166
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.85 E-value=1.8e-08 Score=85.57 Aligned_cols=124 Identities=19% Similarity=0.182 Sum_probs=79.5
Q ss_pred eEEEEeecCCC---CCCceEEEEEccCCcccccchhHHHHHHHhc-C-cEEEEecCC-C---CcCCCCCCCCCCChHhHH
Q 021023 23 KLFTCSWIPQN---QEPKALIFICHGYAMECSIGMNSTAIRLANE-G-YACYGIDYQ-G---HGKSAGLSGYIDNFDDLV 93 (318)
Q Consensus 23 ~l~~~~~~p~~---~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g-~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~ 93 (318)
-|...+|.|.. .++.|+||++||++.....-.......|+.. + +.|+.+++| | +..+... . .....-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~--~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-E--LPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCC-C--CCcchhH
Confidence 45666677763 3567999999997632211101122344444 3 999999999 3 3222211 1 1222336
Q ss_pred HHHHHHHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCccc
Q 021023 94 DDCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 94 ~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~ 149 (318)
.|...++++++++. ..+..+|.|+|+|.||..+..++.. .+..++++|+.++....
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 78888888885542 2367799999999999999888765 34568899988876543
No 167
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.84 E-value=1.4e-06 Score=71.68 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=81.3
Q ss_pred CeeEEEEeecCCC-CCCceEEEEEccCCcccccc--hhHHHH-------------H-------HHhcCcEEEEecCC-CC
Q 021023 21 RVKLFTCSWIPQN-QEPKALIFICHGYAMECSIG--MNSTAI-------------R-------LANEGYACYGIDYQ-GH 76 (318)
Q Consensus 21 g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~--~~~~~~-------------~-------l~~~g~~v~~~d~~-G~ 76 (318)
+..+.|+.+.... ....|+|+++.|+++.+..+ +....+ . +.+. .+++.+|.| |.
T Consensus 49 ~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGt 127 (433)
T PLN03016 49 NVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQPVGS 127 (433)
T ss_pred CeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCCCCC
Confidence 5778888876543 35679999999998876632 111111 1 1122 689999955 89
Q ss_pred cCCCCCCCCCC-ChHhHHHHHHHHHHHH-HhhhhccCceEEEEEEchhHHHHHHHHhh----C------CCCcCEEEEeC
Q 021023 77 GKSAGLSGYID-NFDDLVDDCFNHFTSI-CEKEENKEKMRYLLGESMGGAMVLLLHRK----K------PDYFDGAVLVA 144 (318)
Q Consensus 77 G~s~~~~~~~~-~~~~~~~d~~~~l~~l-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~~vl~~ 144 (318)
|.|........ +-.+.++++..++... ...++....+++|+|.|+||..+..+|.. . +-.++|+++-+
T Consensus 128 GfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 207 (433)
T PLN03016 128 GFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGN 207 (433)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecC
Confidence 98864332211 2223346776666554 33344466789999999999877766643 1 12578999998
Q ss_pred CCccc
Q 021023 145 PMCKI 149 (318)
Q Consensus 145 ~~~~~ 149 (318)
|..+.
T Consensus 208 g~t~~ 212 (433)
T PLN03016 208 PVTYM 212 (433)
T ss_pred CCcCc
Confidence 87654
No 168
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.80 E-value=1.9e-06 Score=68.42 Aligned_cols=127 Identities=18% Similarity=0.258 Sum_probs=81.6
Q ss_pred CeeEEEEeecCCCCCCceEEEEEccCCccccc-chhHHHHHHHhcCcEE--EEecCCCCcCCCCCCC-------------
Q 021023 21 RVKLFTCSWIPQNQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYAC--YGIDYQGHGKSAGLSG------------- 84 (318)
Q Consensus 21 g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v--~~~d~~G~G~s~~~~~------------- 84 (318)
..+|.|+++.......+..|+++.|+|++... ++..+.+.+|+. |.| +.+++-|+|.......
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 35788888766655778889999999998874 346677777776 655 4556666553321000
Q ss_pred -----------CCC---ChHhH-------------------------------------------HHHHHHHHHHHHhhh
Q 021023 85 -----------YID---NFDDL-------------------------------------------VDDCFNHFTSICEKE 107 (318)
Q Consensus 85 -----------~~~---~~~~~-------------------------------------------~~d~~~~l~~l~~~~ 107 (318)
... +.... |-|+..++.++..+-
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 000 11111 234444444443332
Q ss_pred hccC--ceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 108 ENKE--KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 108 ~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
.... -|++++|+|.||++|..+|.-.|..+++++=-++.+.
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 2222 4899999999999999999999999998886666554
No 169
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.77 E-value=7.8e-07 Score=67.96 Aligned_cols=224 Identities=10% Similarity=0.003 Sum_probs=115.3
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEE
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 119 (318)
+|++=||.+.....+....+...+.|++++.+-.+-....... ......++.+...+... ...+..++++-.+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~---~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDS---QSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhh---ccCCCCCEEEEEE
Confidence 5666677766554446666667678999999887643222111 12333333333333322 1112248999999
Q ss_pred chhHHHHHHHHhh---------C-CCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccC---CChhhhhhhh
Q 021023 120 SMGGAMVLLLHRK---------K-PDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKII---PSQDIVDVAF 186 (318)
Q Consensus 120 S~Gg~~a~~~a~~---------~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 186 (318)
|.||...+..... . -.+++++|+-+++..... .......... ++..... ....+....+
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 146 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY----SSSARAFSAA----LPKSSPRWFVPLWPLLQFLL 146 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc----ccHHHHHHHH----cCccchhhHHHHHHHHHHHH
Confidence 9988776655431 1 124889998887754421 0011111111 1111000 0000000000
Q ss_pred cChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcC--CCceEEE
Q 021023 187 KLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASS--SDKTMKL 264 (318)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~ 264 (318)
........... . .......... ..+ .......+|-++++++.|.+++.+..++..+.... -.++...
T Consensus 147 ~~~~~~~~~~~----~--~~~~~~~~~~---~~~--~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~ 215 (240)
T PF05705_consen 147 RLSIISYFIFG----Y--PDVQEYYRRA---LND--FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEK 215 (240)
T ss_pred HHHHHHHHHhc----C--CcHHHHHHHH---Hhh--hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEec
Confidence 00000000000 0 0000000000 011 11233468999999999999999988888777643 3467788
Q ss_pred ecCCcccccccCCccchHHHHHHHHHHH
Q 021023 265 YEGMWHGLLYGEPEENTQIVFRDILNWL 292 (318)
Q Consensus 265 ~~~~gH~~~~~~p~~~~~~~~~~i~~fl 292 (318)
++++.|..++. ...++.++.+.+|+
T Consensus 216 f~~S~HV~H~r---~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 216 FEDSPHVAHLR---KHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCchhhhcc---cCHHHHHHHHHhhC
Confidence 89999998882 45567888888774
No 170
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.76 E-value=5.5e-08 Score=72.63 Aligned_cols=94 Identities=16% Similarity=0.106 Sum_probs=52.6
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc--CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
++...|||+||+.++...| ..+...+... .+.-..+...++....... ..+++..++.+..-|............
T Consensus 2 ~~~hLvV~vHGL~G~~~d~-~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T--~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADM-RYLKNHLEKIPEDLPNARIVVLGYSNNEFKT--FDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHHHH-HHHHHHHHHhhhhcchhhhhhhccccccccc--chhhHHHHHHHHHHHHHhccccccccc
Confidence 4567899999999998877 7776666551 1221222222221111111 124454444443333333211111245
Q ss_pred eEEEEEEchhHHHHHHHHh
Q 021023 113 MRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~ 131 (318)
++.+|||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999876554
No 171
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.73 E-value=3.3e-08 Score=79.54 Aligned_cols=125 Identities=19% Similarity=0.157 Sum_probs=81.9
Q ss_pred eEEEEeecCC-CCCCceEEEEEccCCc---ccccchhHHHHHHHhcC-cEEEEecCCC--CcCCCCCC---CCCCChHhH
Q 021023 23 KLFTCSWIPQ-NQEPKALIFICHGYAM---ECSIGMNSTAIRLANEG-YACYGIDYQG--HGKSAGLS---GYIDNFDDL 92 (318)
Q Consensus 23 ~l~~~~~~p~-~~~~~~~iv~~hG~~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~G--~G~s~~~~---~~~~~~~~~ 92 (318)
-|...+|.|. ..++.|++|+|||.+- +.... ..-...|+++| +.|+++++|- .|.-+... .....-.--
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 3666677887 5567899999999762 22222 22335788887 9999999982 23221110 000111234
Q ss_pred HHHHHHHHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCcc
Q 021023 93 VDDCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCK 148 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (318)
..|...+|+|++++- ..+.++|.|+|+|.||+.++.+.+- ....+.++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 678888888886542 2367789999999999988877654 2245777888888775
No 172
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.73 E-value=5.6e-07 Score=75.08 Aligned_cols=114 Identities=19% Similarity=0.165 Sum_probs=74.3
Q ss_pred CceEEEEEccCCcccccc-hhHHHHHHHhc-CcEEEEecCCCCcCCCCCC------CCCCChHhHHHHHHHHHHHHHhhh
Q 021023 36 PKALIFICHGYAMECSIG-MNSTAIRLANE-GYACYGIDYQGHGKSAGLS------GYIDNFDDLVDDCFNHFTSICEKE 107 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~d~~~~l~~l~~~~ 107 (318)
+.|++|++-|=+.-...+ ...+...|+++ |-.+++++.|-+|.|.+.. -...+.++..+|+..++++++.+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 366666665543222212 12344555555 8899999999999997321 112588999999999999996443
Q ss_pred -hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 108 -ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 108 -~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
.....|++++|-|+||++|..+-.++|+.|.+.+..+++...
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 235569999999999999999999999999999999887654
No 173
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.72 E-value=1.3e-05 Score=65.57 Aligned_cols=130 Identities=19% Similarity=0.171 Sum_probs=88.3
Q ss_pred CCeeEEEEeecCCC-CCCceEEEEEccCCcccccchhHHHHHH----Hh-c-------------CcEEEEecCC-CCcCC
Q 021023 20 RRVKLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTAIRL----AN-E-------------GYACYGIDYQ-GHGKS 79 (318)
Q Consensus 20 ~g~~l~~~~~~p~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~l----~~-~-------------g~~v~~~d~~-G~G~s 79 (318)
.+..|+|+.+.... ...+|.||++.|++|.+... .+..++ .. . -.+++-+|.| |.|.|
T Consensus 55 ~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~--G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFS 132 (454)
T KOG1282|consen 55 EGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG--GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFS 132 (454)
T ss_pred CCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh--hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcc
Confidence 58899999887654 35689999999999887633 111111 00 1 1478888988 77777
Q ss_pred CCCCC--CCCChHhHHHHHHHHH-HHHHhhhhccCceEEEEEEchhHHHHHHHHhh----C------CCCcCEEEEeCCC
Q 021023 80 AGLSG--YIDNFDDLVDDCFNHF-TSICEKEENKEKMRYLLGESMGGAMVLLLHRK----K------PDYFDGAVLVAPM 146 (318)
Q Consensus 80 ~~~~~--~~~~~~~~~~d~~~~l-~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~~vl~~~~ 146 (318)
-.... ...+-+..++|...+| +++.+.+++...+++|.|-|++|...-.+|.. + +-.++|+++-+|.
T Consensus 133 Ys~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~ 212 (454)
T KOG1282|consen 133 YSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGL 212 (454)
T ss_pred ccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcc
Confidence 53322 2235566677777665 55666677788899999999999777766642 2 1257899998887
Q ss_pred ccccc
Q 021023 147 CKIAE 151 (318)
Q Consensus 147 ~~~~~ 151 (318)
.+...
T Consensus 213 td~~~ 217 (454)
T KOG1282|consen 213 TDPEI 217 (454)
T ss_pred cCccc
Confidence 76543
No 174
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.67 E-value=3.1e-07 Score=71.03 Aligned_cols=113 Identities=18% Similarity=0.223 Sum_probs=77.6
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcC--cEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEG--YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
..+.++||+||+..+-..-....++.....| ...+.+.||..|.--+-.....+.+.-..+++.+|+.|.+ ....+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~--~~~~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLAT--DKPVK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHh--CCCCc
Confidence 4578999999998664433244555554444 5678889998776432222222445556788888988843 33578
Q ss_pred eEEEEEEchhHHHHHHHHhh--------CCCCcCEEEEeCCCccc
Q 021023 113 MRYLLGESMGGAMVLLLHRK--------KPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~~ 149 (318)
+|+|++||||..+++....+ .+.+++-+|+.+|-.+.
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999999887643 23467888888887665
No 175
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.66 E-value=9e-08 Score=76.27 Aligned_cols=103 Identities=18% Similarity=0.129 Sum_probs=74.7
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcE---EEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCce
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYA---CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 113 (318)
.-+++++||++.+...+ ..+...+...|+. ++.+++++. .. ........+++..-+.+++... +.++
T Consensus 59 ~~pivlVhG~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-~~--~~~~~~~~~ql~~~V~~~l~~~------ga~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGNF-LPLDYRLAILGWLTNGVYAFELSGG-DG--TYSLAVRGEQLFAYVDEVLAKT------GAKK 128 (336)
T ss_pred CceEEEEccCcCCcchh-hhhhhhhcchHHHhccccccccccc-CC--CccccccHHHHHHHHHHHHhhc------CCCc
Confidence 44799999997777767 7777778777887 888888866 11 1111123344444444444444 6789
Q ss_pred EEEEEEchhHHHHHHHHhhCC--CCcCEEEEeCCCccc
Q 021023 114 RYLLGESMGGAMVLLLHRKKP--DYFDGAVLVAPMCKI 149 (318)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 149 (318)
+.++||||||.++..++...+ .+|+.++.++++-..
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999999998887 789999999887554
No 176
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.65 E-value=3.3e-05 Score=61.60 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=98.7
Q ss_pred hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcccCCChhhhhhhhc
Q 021023 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFK 187 (318)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (318)
....++++|.|.|==|..++..|+. .+||++++-+.-...- ....+....+.+. +.|...-..
T Consensus 168 ~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN-----~~~~l~h~y~~yG---~~ws~a~~d-------- 230 (367)
T PF10142_consen 168 GVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLN-----MKANLEHQYRSYG---GNWSFAFQD-------- 230 (367)
T ss_pred CCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCC-----cHHHHHHHHHHhC---CCCccchhh--------
Confidence 4578899999999999999999984 4678888866432211 1111222222221 122111110
Q ss_pred ChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecC
Q 021023 188 LPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEG 267 (318)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
-...........+.+. .+....|......+++.|.++|.|..|++..+.....+++.+++ ...+..+||
T Consensus 231 ------Y~~~gi~~~l~tp~f~----~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN 299 (367)
T PF10142_consen 231 ------YYNEGITQQLDTPEFD----KLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPN 299 (367)
T ss_pred ------hhHhCchhhcCCHHHH----HHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCC
Confidence 0000001111111111 11222344455577899999999999999999999999999974 568899999
Q ss_pred CcccccccCCccchHHHHHHHHHHHHHHhccC
Q 021023 268 MWHGLLYGEPEENTQIVFRDILNWLDERVATG 299 (318)
Q Consensus 268 ~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~ 299 (318)
++|.... ..+.+.+..|+.......
T Consensus 300 ~~H~~~~-------~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 300 AGHSLIG-------SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred CCcccch-------HHHHHHHHHHHHHHHcCC
Confidence 9998776 248889999998876543
No 177
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.61 E-value=5.7e-07 Score=77.58 Aligned_cols=124 Identities=19% Similarity=0.145 Sum_probs=74.2
Q ss_pred eEEEEeecCCCCC---CceEEEEEccCCcc---cccchhHHHHHHHhcCcEEEEecCC----CCcCCCCCCCCCCChHhH
Q 021023 23 KLFTCSWIPQNQE---PKALIFICHGYAME---CSIGMNSTAIRLANEGYACYGIDYQ----GHGKSAGLSGYIDNFDDL 92 (318)
Q Consensus 23 ~l~~~~~~p~~~~---~~~~iv~~hG~~~~---~~~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 92 (318)
-|+..+|.|.... ..|++|++||.+.. .......-...++.++.-||.++|| |+-.+...... .-.--
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 4666677777533 46999999997632 2111123334556779999999999 33222211110 12334
Q ss_pred HHHHHHHHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCcc
Q 021023 93 VDDCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCK 148 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (318)
..|...+|+|++++- ..+.++|.|+|+|.||..+..++.. ....++++|+.++...
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 678888999996542 2366789999999999888776654 2357999999998544
No 178
>COG0627 Predicted esterase [General function prediction only]
Probab=98.60 E-value=3.5e-06 Score=65.94 Aligned_cols=113 Identities=18% Similarity=0.194 Sum_probs=73.0
Q ss_pred CCceEEEEEccCCcccccc--hhHHHHHHHhcCcEEEEecCC--------------CCcCCCC------CCCC-CCChHh
Q 021023 35 EPKALIFICHGYAMECSIG--MNSTAIRLANEGYACYGIDYQ--------------GHGKSAG------LSGY-IDNFDD 91 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~------~~~~-~~~~~~ 91 (318)
.+-|+++++||..++...+ ...+-+.....|+.++++|-. |-+.|-. +... .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 5678999999999886444 244555555668888887433 2222210 0000 134444
Q ss_pred H-HHHHHHHHHHHHhhhhccC--ceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 92 L-VDDCFNHFTSICEKEENKE--KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 92 ~-~~d~~~~l~~l~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
+ .+++-+.++.. ..... ....++||||||.=|+.+|+++|++++.+..++|.....
T Consensus 132 fl~~ELP~~~~~~---f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAA---FPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHh---cCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 3 33444333322 11111 378899999999999999999999999999999988765
No 179
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.59 E-value=2.6e-06 Score=66.85 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=69.9
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 115 (318)
....-||+.|=|+-...- ..+...|+++|+.|+.+|---+-.|. -+.++.+.|+..++++. ....+..++.
T Consensus 259 sd~~av~~SGDGGWr~lD-k~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y--~~~w~~~~~~ 329 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLD-KEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFY--ARRWGAKRVL 329 (456)
T ss_pred cceEEEEEecCCchhhhh-HHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHH--HHhhCcceEE
Confidence 445567777766655545 78999999999999999965544443 37888999999999998 5556888999
Q ss_pred EEEEchhHHHHHHHHhhCC
Q 021023 116 LLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p 134 (318)
|+|+|+|+-+.-..-.+-|
T Consensus 330 liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 330 LIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EEeecccchhhHHHHHhCC
Confidence 9999999988766655554
No 180
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=4.3e-06 Score=61.71 Aligned_cols=252 Identities=16% Similarity=0.108 Sum_probs=123.8
Q ss_pred eEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHH----H
Q 021023 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF----N 98 (318)
Q Consensus 23 ~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~----~ 98 (318)
+-++..+.|. +..+.-|++-|-|.....--..+...+.++|...++++-|-+|....+......+ +.+.|+. +
T Consensus 101 ~A~~~~liPQ--K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~L-e~vtDlf~mG~A 177 (371)
T KOG1551|consen 101 TARVAWLIPQ--KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHML-EYVTDLFKMGRA 177 (371)
T ss_pred ceeeeeeccc--CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHH-HHHHHHHHhhHH
Confidence 4445555664 4445555555544443311013556677888999999999999875432211111 1222322 1
Q ss_pred HHHHHHh----hhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccccccCCchhHHHHHhhhhhcCCCcc
Q 021023 99 HFTSICE----KEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWK 174 (318)
Q Consensus 99 ~l~~l~~----~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (318)
.|++... ....+..++.++|-||||.+|..+...++..|.-+=++++......... ..+......+.+......
T Consensus 178 ~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~te--g~l~~~~s~~~~~~~~t~ 255 (371)
T KOG1551|consen 178 TIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATE--GLLLQDTSKMKRFNQTTN 255 (371)
T ss_pred HHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhh--hhhhhhhHHHHhhccCcc
Confidence 2222211 1223678999999999999999998877766665544444322211000 011110111111111000
Q ss_pred cCCChhhhhhhhcChh--hhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCccccc-----EEEEEeCCCcccChHH
Q 021023 175 IIPSQDIVDVAFKLPE--KRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIP-----FIVLHGEEDKVTDKAV 247 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~lii~G~~D~~~~~~~ 247 (318)
......+.+. ..... .... +..-......++...+-...+....+| +.++.+++|..+|...
T Consensus 256 ------~~~~~~r~p~Q~~~~~~-~~~s----rn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~g 324 (371)
T KOG1551|consen 256 ------KSGYTSRNPAQSYHLLS-KEQS----RNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTG 324 (371)
T ss_pred ------hhhhhhhCchhhHHHHH-HHhh----hcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccC
Confidence 0000000000 00000 0000 000111111111111111122333333 5788899999999988
Q ss_pred HHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 248 SVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
...+.+.. |++++..++ +||...+- -..+.+.++|.+-|++..
T Consensus 325 v~~lQ~~W--Pg~eVr~~e-gGHVsayl---~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 325 VRSLQEIW--PGCEVRYLE-GGHVSAYL---FKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred cHHHHHhC--CCCEEEEee-cCceeeee---hhchHHHHHHHHHHHhhh
Confidence 88888888 889999998 78865431 223346677777776554
No 181
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.54 E-value=5.7e-06 Score=63.35 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=68.4
Q ss_pred eEEEEEccCCccccc-chhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE
Q 021023 38 ALIFICHGYAMECSI-GMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 115 (318)
.++|+.||+|.+... -+..+.+.+... |..+.++.. |.+ ...+......++++.+.+.+....+. . .-++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l---~-~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL---S-QGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh---h-CcEE
Confidence 458999999977653 235565555332 667776654 332 22233345666666666555543221 2 3599
Q ss_pred EEEEchhHHHHHHHHhhCCC--CcCEEEEeCCCcc
Q 021023 116 LLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCK 148 (318)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 148 (318)
++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999999876 5999999887543
No 182
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.46 E-value=1.8e-05 Score=57.86 Aligned_cols=81 Identities=27% Similarity=0.307 Sum_probs=52.8
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcE-EEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYA-CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 115 (318)
+..|||..|||.+...+ ..+. + ..++. ++++|||.. +++. | +. ..+.+.
T Consensus 11 ~~LilfF~GWg~d~~~f-~hL~--~-~~~~D~l~~yDYr~l-----------~~d~---~----~~--------~y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPF-SHLI--L-PENYDVLICYDYRDL-----------DFDF---D----LS--------GYREIY 60 (213)
T ss_pred CeEEEEEecCCCChHHh-hhcc--C-CCCccEEEEecCccc-----------cccc---c----cc--------cCceEE
Confidence 57899999999987755 4432 1 23454 466788733 1110 1 11 468999
Q ss_pred EEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 116 LLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
|+|+|||-.+|..+....| ++..|.+++....
T Consensus 61 lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred EEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 9999999999988766543 5666666654433
No 183
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.43 E-value=1.3e-05 Score=60.92 Aligned_cols=114 Identities=18% Similarity=0.152 Sum_probs=63.0
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcC----cEEEEecCCCCcCCCCCC-CCCCChHhHHHHHHHHHHHHHhhhhc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEG----YACYGIDYQGHGKSAGLS-GYIDNFDDLVDDCFNHFTSICEKEEN 109 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~ 109 (318)
.+.|++++.||-......-.....+.|...| -.++.+|.--.-...... .....+..+++++.-.++..-....
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~- 174 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA- 174 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc-
Confidence 5679999999844222211133445554443 456666653210000000 0001122223333333322200001
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
....-+|+|.|+||.+++..+..+|+.+..++..+|....
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 2334679999999999999999999999999999887654
No 184
>PLN02606 palmitoyl-protein thioesterase
Probab=98.43 E-value=8.9e-06 Score=62.27 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=65.1
Q ss_pred eEEEEEccCCc--ccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceE
Q 021023 38 ALIFICHGYAM--ECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 38 ~~iv~~hG~~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 114 (318)
.+||+.||+|. +.... ..+.+.+.+. |..+.++. .|-+. ..+......++++.+.+.+....+ .. .-+
T Consensus 27 ~PvViwHGlgD~~~~~~~-~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~---L~-~G~ 97 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKV-SNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKE---LS-EGY 97 (306)
T ss_pred CCEEEECCCCcccCCchH-HHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchh---hc-Cce
Confidence 45899999994 33333 7777777423 66555555 23221 112223455555555555544321 12 359
Q ss_pred EEEEEchhHHHHHHHHhhCCC--CcCEEEEeCCCcc
Q 021023 115 YLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCK 148 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 148 (318)
.++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999876 4999999887643
No 185
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.40 E-value=4.6e-06 Score=61.63 Aligned_cols=105 Identities=21% Similarity=0.253 Sum_probs=67.9
Q ss_pred eecCCCCCCceEEEEEccC--CcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHH----HHHHHHHH
Q 021023 28 SWIPQNQEPKALIFICHGY--AMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV----DDCFNHFT 101 (318)
Q Consensus 28 ~~~p~~~~~~~~iv~~hG~--~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~----~d~~~~l~ 101 (318)
+..|+ +|+.+|=|+-|. |......|+.+.+.|+++||.|++.-+.- | .+-...+ +.....++
T Consensus 10 vl~P~--~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t---------fDH~~~A~~~~~~f~~~~~ 77 (250)
T PF07082_consen 10 VLIPP--RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T---------FDHQAIAREVWERFERCLR 77 (250)
T ss_pred EEeCC--CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C---------CcHHHHHHHHHHHHHHHHH
Confidence 34455 577778888874 34445556999999999999999988742 1 1222223 33444444
Q ss_pred HHHhhhhcc--CceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeC
Q 021023 102 SICEKEENK--EKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVA 144 (318)
Q Consensus 102 ~l~~~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 144 (318)
.+..+.... .-+++-+|||+|+-+-+.+...++..-++.++++
T Consensus 78 ~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 78 ALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred HHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 443332222 2378899999999998888877654446667665
No 186
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.34 E-value=1.8e-06 Score=65.37 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=51.2
Q ss_pred ceEEEEEccCCccccc--chhHHHHHHHhc--CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 37 KALIFICHGYAMECSI--GMNSTAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~--~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
..+||+.||+|.+... -+..+...+.+. |--|.+++.-....++.......+..+.++.+.+.+.. .+.. ..
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~---~p~L-~~ 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLAN---DPEL-AN 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH----GGG-TT
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhh---Chhh-hc
Confidence 3458999999976431 124444443332 67777777632111110111001233334444443333 2221 24
Q ss_pred eEEEEEEchhHHHHHHHHhhCCC-CcCEEEEeCCCcc
Q 021023 113 MRYLLGESMGGAMVLLLHRKKPD-YFDGAVLVAPMCK 148 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 148 (318)
-++++|+|.||.++-.++.+.++ .|+.+|.++++-.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 69999999999999999999764 5999999886543
No 187
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.31 E-value=1.1e-05 Score=66.07 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=62.6
Q ss_pred chhHHHHHHHhcCcEE-----EE-ecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHH
Q 021023 53 GMNSTAIRLANEGYAC-----YG-IDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMV 126 (318)
Q Consensus 53 ~~~~~~~~l~~~g~~v-----~~-~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a 126 (318)
+|..+++.|.+.||.. .+ +|+|--- ...+++...+...|+..... ..++++|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~---------~~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP---------AERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch---------hhHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHH
Confidence 3489999998878742 22 6877211 13446677788888777432 37899999999999999
Q ss_pred HHHHhhCCC------CcCEEEEeCCCccc
Q 021023 127 LLLHRKKPD------YFDGAVLVAPMCKI 149 (318)
Q Consensus 127 ~~~a~~~p~------~v~~~vl~~~~~~~ 149 (318)
..+....+. .|+++|.++++...
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 999877642 59999999987654
No 188
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=3.8e-05 Score=57.08 Aligned_cols=102 Identities=18% Similarity=0.195 Sum_probs=67.3
Q ss_pred eEEEEEccCCcccccc-hhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE
Q 021023 38 ALIFICHGYAMECSIG-MNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~-~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 115 (318)
-++|++||.+.+.... +..+.+.+.+. |..|++.|. |-|- .........++++.+.+.+....+ -.+-+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~~m~~----lsqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVKQMPE----LSQGYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHhcchh----ccCceE
Confidence 3488999999877652 36777777665 889999986 4441 111112445555555555543322 245689
Q ss_pred EEEEchhHHHHHHHHhhCCC-CcCEEEEeCCCc
Q 021023 116 LLGESMGGAMVLLLHRKKPD-YFDGAVLVAPMC 147 (318)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 147 (318)
++|.|.||.++-.++..-++ .|+..|.++++-
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999999998876432 488888777653
No 189
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.26 E-value=1.4e-05 Score=68.06 Aligned_cols=106 Identities=13% Similarity=0.053 Sum_probs=66.3
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHh----------------cCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHH
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLAN----------------EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHF 100 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 100 (318)
.-+|+|++|..|+-... +.++..... ..|+.+++|+-+- -..-+..++.++++-+..+|
T Consensus 89 GIPVLFIPGNAGSyKQv-RSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQV-RSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHH-HHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHHH
Confidence 45799999998887655 566554431 1367777776431 00011136777777777777
Q ss_pred HHHHhhhh----cc---CceEEEEEEchhHHHHHHHHhh---CCCCcCEEEEeCCCc
Q 021023 101 TSICEKEE----NK---EKMRYLLGESMGGAMVLLLHRK---KPDYFDGAVLVAPMC 147 (318)
Q Consensus 101 ~~l~~~~~----~~---~~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 147 (318)
+++.+.-+ .. ...|+++||||||.+|...+.. .++.|.-++..+++-
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 77754322 22 4469999999999999877642 234455566555543
No 190
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.24 E-value=7.7e-06 Score=64.44 Aligned_cols=108 Identities=17% Similarity=0.082 Sum_probs=80.3
Q ss_pred eEEEEEccCCcccccc------hhHHHHHHHhcCcEEEEecCCCCcCCCCCCC---------CCCChHhHHHHHHHHHHH
Q 021023 38 ALIFICHGYAMECSIG------MNSTAIRLANEGYACYGIDYQGHGKSAGLSG---------YIDNFDDLVDDCFNHFTS 102 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~d~~~~l~~ 102 (318)
.+|+|.-|--++-+.+ +..+++.| +.-++..+.|-+|+|.+-.. ...+.++..+|...+|..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 5689999977765532 23344433 67899999999999863211 113667888999999999
Q ss_pred HHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 103 ICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 103 l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
++........+++.+|-|+||+++..+=.++|..+.|....+.+.-
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 9765444567999999999999999999999998888776655443
No 191
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.22 E-value=0.00022 Score=56.81 Aligned_cols=85 Identities=18% Similarity=0.171 Sum_probs=57.9
Q ss_pred cEEEEecCC-CCcCCCCCCCCC-CChHhHHHHHHHHHHHHH-hhhhccCceEEEEEEchhHHHHHHHHhh----C-----
Q 021023 66 YACYGIDYQ-GHGKSAGLSGYI-DNFDDLVDDCFNHFTSIC-EKEENKEKMRYLLGESMGGAMVLLLHRK----K----- 133 (318)
Q Consensus 66 ~~v~~~d~~-G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~-~~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~----- 133 (318)
.+++-+|.| |.|.|-...... .+-+..++|+..+|.... ..+.....+++|.|-|+||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 468999999 889886443221 222344577777776553 3355577899999999999887777653 1
Q ss_pred -CCCcCEEEEeCCCcccc
Q 021023 134 -PDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 134 -p~~v~~~vl~~~~~~~~ 150 (318)
+-.++|+++-+|.....
T Consensus 82 ~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 82 PPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CceeeeEEEeCCCCCCcc
Confidence 12478999988876553
No 192
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.20 E-value=0.00011 Score=55.37 Aligned_cols=117 Identities=12% Similarity=0.093 Sum_probs=83.0
Q ss_pred EEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHH
Q 021023 25 FTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSIC 104 (318)
Q Consensus 25 ~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 104 (318)
++....+....+.|.|+++-...++....++.-.+.|... ..|+.-||-.--.-+-..+. ++++++++-+.+++..+
T Consensus 91 ~F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~- 167 (415)
T COG4553 91 HFERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFL- 167 (415)
T ss_pred hhhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHh-
Confidence 3444445545667889999888888776667778888665 78999998654333323333 68999999999999998
Q ss_pred hhhhccCceEEEEEEchhHH-----HHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 105 EKEENKEKMRYLLGESMGGA-----MVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 105 ~~~~~~~~~~~l~G~S~Gg~-----~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
+. .+++++.|.-+. +++..+...|.....+++++++.+..
T Consensus 168 -----Gp-~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 168 -----GP-DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred -----CC-CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 44 488888887553 33333445677788999999887763
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.19 E-value=6.8e-05 Score=53.67 Aligned_cols=111 Identities=19% Similarity=0.229 Sum_probs=67.1
Q ss_pred CCceEEEEEccCCccc-ccch--------------hHHHHHHHhcCcEEEEecCCC---CcCC-CCCCCCCCChHhHHHH
Q 021023 35 EPKALIFICHGYAMEC-SIGM--------------NSTAIRLANEGYACYGIDYQG---HGKS-AGLSGYIDNFDDLVDD 95 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~-~~~~--------------~~~~~~l~~~g~~v~~~d~~G---~G~s-~~~~~~~~~~~~~~~d 95 (318)
.++..+|++||.|.-. ..|- -++++...+.||.|++.+.-- +-.+ ..+.....+. ++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~---veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTP---VEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccch---HHH
Confidence 4567899999987432 2221 345566667799999987531 1111 1111111122 223
Q ss_pred HHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC--CcCEEEEeCCCcccc
Q 021023 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKIA 150 (318)
Q Consensus 96 ~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~ 150 (318)
+.-+-..+ -.....+.+.++.||+||...+.+..++|+ +|.++.+.+++....
T Consensus 176 ~~yvw~~~--v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 176 AKYVWKNI--VLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSP 230 (297)
T ss_pred HHHHHHHH--hcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCc
Confidence 32222222 111257789999999999999999999874 677888887775443
No 194
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.19 E-value=8.5e-06 Score=52.81 Aligned_cols=60 Identities=20% Similarity=0.255 Sum_probs=50.8
Q ss_pred cccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 229 SIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
..|+|++.++.|+.+|.+.++.+.+.+ ++++++.+++.||.... .. ..-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~-~~---s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYA-GG---SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceec-CC---ChHHHHHHHHHHHc
Confidence 589999999999999999999999999 67899999999999885 22 12377778888863
No 195
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.02 E-value=0.00039 Score=52.33 Aligned_cols=42 Identities=26% Similarity=0.416 Sum_probs=37.0
Q ss_pred hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
..+.++..++|||+||.+++.....+|+.+...++++|....
T Consensus 133 ~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 133 RTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred ccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 346677999999999999999999999999999999987643
No 196
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.99 E-value=2.7e-05 Score=44.80 Aligned_cols=48 Identities=15% Similarity=0.136 Sum_probs=30.4
Q ss_pred ccCCccceEEEeecCCeeEEEEeecCCC-----CCCceEEEEEccCCcccccc
Q 021023 6 DHNIKYDEEFILNSRRVKLFTCSWIPQN-----QEPKALIFICHGYAMECSIG 53 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~-----~~~~~~iv~~hG~~~~~~~~ 53 (318)
..+++.+++.+.+.||.-|......+.. ..++|+|++.||+.+++..|
T Consensus 7 ~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 7 KHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp HTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred HcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 4578899999999999999988775443 25689999999999999887
No 197
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.87 E-value=0.00027 Score=57.53 Aligned_cols=115 Identities=12% Similarity=0.095 Sum_probs=84.2
Q ss_pred CCceEEEEEccCCcccccch----hHHHHHHHhcCcEEEEecCCCCcCCCCCCCC------CCChHhHHHHHHHHHHHHH
Q 021023 35 EPKALIFICHGYAMECSIGM----NSTAIRLANEGYACYGIDYQGHGKSAGLSGY------IDNFDDLVDDCFNHFTSIC 104 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~l~ 104 (318)
...|..|+|-|=+.-...|. ..+.....+.|-.|+..+.|-+|.|.+.... ..+..+...|+..+|+.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 45677777877554443231 2333334445899999999999988643222 2356788999999999995
Q ss_pred hhhhccC-ceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 105 EKEENKE-KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 105 ~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
.+..... .+.+.+|-|+-|.++..+=.++|+.+.|.|..+++...
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 5544444 39999999999999999999999999999988877654
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.87 E-value=0.0013 Score=46.96 Aligned_cols=120 Identities=13% Similarity=0.060 Sum_probs=73.9
Q ss_pred EeecCCCCCCceEEEEEccCCcccccchhH-------HHHHHH------hcCcEEEEecCCCCcCCCCC---CCCCCChH
Q 021023 27 CSWIPQNQEPKALIFICHGYAMECSIGMNS-------TAIRLA------NEGYACYGIDYQGHGKSAGL---SGYIDNFD 90 (318)
Q Consensus 27 ~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~-------~~~~l~------~~g~~v~~~d~~G~G~s~~~---~~~~~~~~ 90 (318)
..++..+ ....+.++++|.+.+....... +...+. ..+-.+-++-|-|+-..... ......-+
T Consensus 10 va~GD~d-~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~ 88 (177)
T PF06259_consen 10 VAVGDPD-TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYAR 88 (177)
T ss_pred EEECCcC-CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHH
Confidence 3455554 5677899999988775533211 111111 12234555555554333110 01111245
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
.-+.++..+++.|.... ....++.++|||+|+.++-..+...+..+..+|+++++.-
T Consensus 89 ~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 56778888888885433 2566899999999999998888776777999999887643
No 199
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.81 E-value=8.5e-05 Score=52.41 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=39.2
Q ss_pred HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC----CcCEEEEeCCCccc
Q 021023 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD----YFDGAVLVAPMCKI 149 (318)
Q Consensus 90 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 149 (318)
......+...++... ...+..+++++|||+||.+|..++..... .+..++.++++...
T Consensus 8 ~~~~~~i~~~~~~~~--~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 8 RSLANLVLPLLKSAL--AQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHH--HHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 334445555555542 22367899999999999999998877543 46667777766543
No 200
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.62 E-value=0.003 Score=50.07 Aligned_cols=238 Identities=10% Similarity=0.047 Sum_probs=121.7
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEE
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 118 (318)
+||.+=||.+..+.+...+.....+.||.++.+-.|-+-..........+......-+..++... ..+..++++--
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~----~~~~~pi~fh~ 115 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDY----NSDPCPIIFHV 115 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhc----cCCcCceEEEE
Confidence 46666667766665767777888888999999988866443322222223333334444444433 23567888889
Q ss_pred EchhHHHHHHHH---h-hC-C---CCcCEEEEeCCCcccccccCCch--hH---HHHHhhhhh---cCCCcccCCChhhh
Q 021023 119 ESMGGAMVLLLH---R-KK-P---DYFDGAVLVAPMCKIAENVKPHP--LV---ISVLTKLCK---FIPTWKIIPSQDIV 182 (318)
Q Consensus 119 ~S~Gg~~a~~~a---~-~~-p---~~v~~~vl~~~~~~~~~~~~~~~--~~---~~~~~~~~~---~~~~~~~~~~~~~~ 182 (318)
+|+||...+... . +. | +.+.+++..+.+........... .. ......+.. ..........
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 191 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGN---- 191 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeec----
Confidence 999997665443 1 12 2 34566776665554321111000 00 000000000 0000000000
Q ss_pred hhhhcChhhhHhhhhCCCCcCCccchhhHHHHhhhchhHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCC--Cc
Q 021023 183 DVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSS--DK 260 (318)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~ 260 (318)
............... ......++ ..+...-.....+.+.+++..|.++|....+++.+..... ++
T Consensus 192 --~~~~~~~~~~~~~~~--------~~r~~~~~---~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v 258 (350)
T KOG2521|consen 192 --EGGAYLLGPLAEKIS--------MSRKYHFL---DRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNV 258 (350)
T ss_pred --ccchhhhhhhhhccc--------cccchHHH---HHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceE
Confidence 000000000000000 00000000 0111122223467888989999999999998886665433 44
Q ss_pred eEEEecCCcccccccCCccchHHHHHHHHHHHHHHhccCC
Q 021023 261 TMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGN 300 (318)
Q Consensus 261 ~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~~~~ 300 (318)
+..-+.++-|..+. ..+.....+...+|+........
T Consensus 259 ~s~~~~ds~H~~h~---r~~p~~y~~~~~~Fl~~~~~~~~ 295 (350)
T KOG2521|consen 259 KSVKFKDSEHVAHF---RSFPKTYLKKCSEFLRSVISSYN 295 (350)
T ss_pred EEeeccCccceeee---ccCcHHHHHHHHHHHHhcccccC
Confidence 55556677888776 24556689999999988765443
No 201
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.59 E-value=0.00018 Score=60.29 Aligned_cols=90 Identities=14% Similarity=0.038 Sum_probs=58.6
Q ss_pred hHHHHHHHhcCcEEEEecCCCCcCCCCCCCC-CCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhC
Q 021023 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGY-IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
..+++.|++.||. --++.|....-+.... ....+++...+...|+.+.. ..+.++++|+||||||.+++.+...-
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~--~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVA--TNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHH--HcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 8999999999986 3444443322211110 11335666777777776632 22468999999999999999877532
Q ss_pred C---------------CCcCEEEEeCCCcc
Q 021023 134 P---------------DYFDGAVLVAPMCK 148 (318)
Q Consensus 134 p---------------~~v~~~vl~~~~~~ 148 (318)
. ..|++.|.++++..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 1 24788888887643
No 202
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.43 E-value=0.00071 Score=50.62 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=31.5
Q ss_pred CceEEEEEEchhHHHHHHHHhhC----CCCcCEEEEeCCCccc
Q 021023 111 EKMRYLLGESMGGAMVLLLHRKK----PDYFDGAVLVAPMCKI 149 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~~ 149 (318)
.+++++.|||.||.+|..++... .++|.+++..+++...
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 34699999999999999998763 3578899888876544
No 203
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.37 E-value=0.0014 Score=54.58 Aligned_cols=114 Identities=20% Similarity=0.287 Sum_probs=68.5
Q ss_pred EEEeecCCCCCCceEEEEEccCCcc------cccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHH
Q 021023 25 FTCSWIPQNQEPKALIFICHGYAME------CSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFN 98 (318)
Q Consensus 25 ~~~~~~p~~~~~~~~iv~~hG~~~~------~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 98 (318)
.|..|-++...++-.|+-+||+|.- .+.|++.++..| |+.|+.+||---...+ +....+++.-
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP--------FPRaleEv~f 452 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP--------FPRALEEVFF 452 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC--------CCcHHHHHHH
Confidence 4555554443556688889998842 233444454444 8999999985433322 2222344444
Q ss_pred HHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhh----CCCCcCEEEEeCCCccc
Q 021023 99 HFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRK----KPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 99 ~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~~ 149 (318)
+.-|+.++. ..-.++|+++|-|.||.+.+.++.+ .-...+|+++..++.-+
T Consensus 453 AYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 453 AYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred HHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 444543322 2246799999999999877666543 22234788887766544
No 204
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.35 E-value=0.0014 Score=49.76 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=35.2
Q ss_pred hHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhC-----CCCcCEEEEeCCCc
Q 021023 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK-----PDYFDGAVLVAPMC 147 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~ 147 (318)
+.....++...+..++ ...+..++++.|||+||.+|..++... +..+..+..-+|..
T Consensus 107 ~~~~~~~~~~~~~~~~--~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 107 YKSLYNQVLPELKSAL--KQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHH--hhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 3444445555555442 223567899999999999999888642 23355444444443
No 205
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.33 E-value=0.00061 Score=47.25 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+...++.+.+ .....++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~--~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVE--KYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHH--HSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh--cccCccchhhccchHHHHHHHHHHh
Confidence 44444444422 2245789999999999999988864
No 206
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.26 E-value=0.00094 Score=48.23 Aligned_cols=106 Identities=17% Similarity=0.105 Sum_probs=59.2
Q ss_pred EEEEEccCCccccc--chhHHHHHHHhc-C---cEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 39 LIFICHGYAMECSI--GMNSTAIRLANE-G---YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 39 ~iv~~hG~~~~~~~--~~~~~~~~l~~~-g---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
.||+..|.+..... .-..+.+.+... | ..+..++||-..... .+..+...-+.++...|+.. .......
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~--~~~CP~~ 81 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEY--AARCPNT 81 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHH--HHHSTTS
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHH--HHhCCCC
Confidence 46666676554321 112344444432 3 455556676432221 11124555566777777666 2334677
Q ss_pred eEEEEEEchhHHHHHHHHhh--C----CCCcCEEEEeCCCccc
Q 021023 113 MRYLLGESMGGAMVLLLHRK--K----PDYFDGAVLVAPMCKI 149 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~--~----p~~v~~~vl~~~~~~~ 149 (318)
+++|+|+|.|+.++..++.. . .++|.++++++-+...
T Consensus 82 kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 82 KIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred CEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 99999999999999999876 2 2568899998876543
No 207
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.21 E-value=0.0011 Score=54.43 Aligned_cols=117 Identities=18% Similarity=0.222 Sum_probs=73.6
Q ss_pred cCCCCCCceEEEEEccCCcccccchhHHHH-------------------HHHhcCcEEEEecCC-CCcCCCC-CCCCCCC
Q 021023 30 IPQNQEPKALIFICHGYAMECSIGMNSTAI-------------------RLANEGYACYGIDYQ-GHGKSAG-LSGYIDN 88 (318)
Q Consensus 30 ~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d~~-G~G~s~~-~~~~~~~ 88 (318)
.|.+..++|.|+++.|++|++..+ ..+.+ .+... -.++.+|+| |.|.|.. ......+
T Consensus 94 ~~ndp~~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d 171 (498)
T COG2939 94 SPNDPANRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKD 171 (498)
T ss_pred CCCCCCCCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccc
Confidence 334445789999999999988766 33211 01111 478899954 8888874 2222346
Q ss_pred hHhHHHHHHHHHHHHHhh-hhc--cCceEEEEEEchhHHHHHHHHhhCCC---CcCEEEEeCCCcc
Q 021023 89 FDDLVDDCFNHFTSICEK-EEN--KEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVAPMCK 148 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~-~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 148 (318)
.....+|+..+++.+... +.. ...+.+|+|-|+||.-+..+|..--+ ..++++++.+...
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 666677777766655321 111 33589999999999988888854322 3566666555443
No 208
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.15 E-value=0.0015 Score=53.17 Aligned_cols=74 Identities=19% Similarity=0.201 Sum_probs=52.2
Q ss_pred hhHHHHHHHhcCcE------EEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHH
Q 021023 54 MNSTAIRLANEGYA------CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVL 127 (318)
Q Consensus 54 ~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~ 127 (318)
|..+++.|+.-||. -..+|+|-.-.. ....+++...+...|+.. ....+.++++|++|||||.+.+
T Consensus 126 w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~------~e~rd~yl~kLK~~iE~~--~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 126 WHELIENLVGIGYERGKTLFGAPYDWRLSYHN------SEERDQYLSKLKKKIETM--YKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHhhCcccCceeeccccchhhccCC------hhHHHHHHHHHHHHHHHH--HHHcCCCceEEEecCCccHHHH
Confidence 48888889888886 456777731110 023455566666666666 3334669999999999999999
Q ss_pred HHHhhCCC
Q 021023 128 LLHRKKPD 135 (318)
Q Consensus 128 ~~a~~~p~ 135 (318)
.+....++
T Consensus 198 yFl~w~~~ 205 (473)
T KOG2369|consen 198 YFLKWVEA 205 (473)
T ss_pred HHHhcccc
Confidence 99988775
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.15 E-value=0.012 Score=49.60 Aligned_cols=130 Identities=26% Similarity=0.348 Sum_probs=79.3
Q ss_pred eecCCe--eEEEEeecCCCCCCceEEEEEccCCcccccchhH----HHHHHHhcCcEEEEecCCCCcCCCC--CCCCCCC
Q 021023 17 LNSRRV--KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS----TAIRLANEGYACYGIDYQGHGKSAG--LSGYIDN 88 (318)
Q Consensus 17 ~~~~g~--~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~ 88 (318)
...++. .|.+.++.|.. =+.-++.+-|.|......... +...+ .+||.++.=|- ||..+.. ......+
T Consensus 8 ~~~~~~~~~i~fev~LP~~--WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n 83 (474)
T PF07519_consen 8 HPSDGSAPNIRFEVWLPDN--WNGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNN 83 (474)
T ss_pred ecCCCCcceEEEEEECChh--hccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCC
Confidence 334444 89999999983 112266666655444322122 33444 67999999996 6665533 1111123
Q ss_pred hHhHHH-------HHHHHHHHHHhh-hhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcccc
Q 021023 89 FDDLVD-------DCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 89 ~~~~~~-------d~~~~l~~l~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
.+.+.+ +...+-+.+.+. -......-+..|.|-||.-++..|.++|+-+++++.-+|.....
T Consensus 84 ~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 84 PEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHH
Confidence 332222 111111222111 11245678899999999999999999999999999999987653
No 210
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.06 E-value=0.0014 Score=47.89 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=46.8
Q ss_pred HHHHHHhcCcEEEEecCCCCcCCCCC----CCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 57 TAIRLANEGYACYGIDYQGHGKSAGL----SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 57 ~~~~l~~~g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+..|... .+|++|-||-....... .....-.+---.|+.++.++..++.+ +.++++|+|||.|+.+..++...
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHH
Confidence 33445444 78999988853222111 00001222335677777777754443 56799999999999999999876
Q ss_pred C
Q 021023 133 K 133 (318)
Q Consensus 133 ~ 133 (318)
+
T Consensus 116 ~ 116 (207)
T PF11288_consen 116 E 116 (207)
T ss_pred H
Confidence 4
No 211
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.01 E-value=0.0071 Score=52.57 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=71.3
Q ss_pred eEEEEeecCCCCCC--ceEEEEEccCCccccc---c-hhHHHHHHHhcCcEEEEecCC----CCcCCCCCCCCCCChHhH
Q 021023 23 KLFTCSWIPQNQEP--KALIFICHGYAMECSI---G-MNSTAIRLANEGYACYGIDYQ----GHGKSAGLSGYIDNFDDL 92 (318)
Q Consensus 23 ~l~~~~~~p~~~~~--~~~iv~~hG~~~~~~~---~-~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 92 (318)
-|+.-+|.|..... .|++|++||.+-.... + .......+..+..-|+.+.+| |+......... -++.
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~-gN~g-- 172 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAP-GNLG-- 172 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCC-Cccc--
Confidence 35555667765322 6999999998743322 1 012222333445778888888 33222211110 1111
Q ss_pred HHHHHHHHHHHHhh---hhccCceEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCccc
Q 021023 93 VDDCFNHFTSICEK---EENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 93 ~~d~~~~l~~l~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~ 149 (318)
..|...++++++.. -..+.++|.++|||.||..+..+... ....+.++|.+++....
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 23666777777433 22367799999999999998777643 12456666766665443
No 212
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.94 E-value=0.18 Score=41.89 Aligned_cols=122 Identities=19% Similarity=0.112 Sum_probs=73.8
Q ss_pred EEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEe-cCCCCcCCCCCCCCCCChHhH
Q 021023 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGI-DYQGHGKSAGLSGYIDNFDDL 92 (318)
Q Consensus 15 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~-d~~G~G~s~~~~~~~~~~~~~ 92 (318)
.+.+..+..+.|+. -|.+ -..|..|+.-|+-. .+.+ -..+++.| |...+.+ |.|--|.+--. .-+++
T Consensus 269 r~~D~~reEi~yYF-nPGD-~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYl-----Gs~ey 337 (511)
T TIGR03712 269 RLVDSKRQEFIYYF-NPGD-FKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYL-----GSDEY 337 (511)
T ss_pred eEecCCCCeeEEec-CCcC-CCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeee-----CcHHH
Confidence 44555566666653 4654 45577899999876 3334 12233334 5655554 77766655422 22333
Q ss_pred HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
-+.+.++|+...+.-..+...++|-|-|||..-|+.++++.. ..++|+--|....
T Consensus 338 E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NL 392 (511)
T TIGR03712 338 EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccch
Confidence 344444444443333446678999999999999999998754 3677766665544
No 213
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.90 E-value=0.012 Score=41.08 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=34.9
Q ss_pred CceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCccc
Q 021023 111 EKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (318)
.....+-|-||||..|..+..++|+.+.++|.+++..+.
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 455778999999999999999999999999999988765
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.90 E-value=0.0023 Score=51.23 Aligned_cols=108 Identities=16% Similarity=0.089 Sum_probs=82.7
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCC--CCChHhHHHHHHHHHHHHHhhhhccCc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY--IDNFDDLVDDCFNHFTSICEKEENKEK 112 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~d~~~~l~~l~~~~~~~~~ 112 (318)
..+|+|+..-|++.+...........| +-+-+.+++|-+|.|...+.. ..++++.+.|.+++++.++.. -.+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i---Y~~ 134 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI---YPG 134 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh---ccC
Confidence 457889999998876544423444444 357899999999999855432 357889999999999998442 356
Q ss_pred eEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCcc
Q 021023 113 MRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (318)
+.+--|-|-||+.++.+=.-+|+-|.+.|....+.+
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 789999999999999988889999999987665543
No 215
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.80 E-value=0.0052 Score=40.23 Aligned_cols=40 Identities=8% Similarity=0.036 Sum_probs=24.5
Q ss_pred eEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccc
Q 021023 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG 53 (318)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~ 53 (318)
.++.++.+|..||+....+.+ ....+|||+||++++--.|
T Consensus 69 phf~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 69 PHFKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp -EEEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GGGG
T ss_pred CCeeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHHhH
Confidence 355667789999999887764 5566799999999986544
No 216
>PLN02162 triacylglycerol lipase
Probab=96.70 E-value=0.0063 Score=49.98 Aligned_cols=22 Identities=36% Similarity=0.522 Sum_probs=19.2
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..++++.|||+||.+|..+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 5668999999999999998764
No 217
>PLN00413 triacylglycerol lipase
Probab=96.67 E-value=0.0071 Score=49.81 Aligned_cols=22 Identities=32% Similarity=0.522 Sum_probs=19.7
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..++++.|||+||.+|..+|.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 5678999999999999998874
No 218
>PLN02454 triacylglycerol lipase
Probab=96.62 E-value=0.01 Score=48.27 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHhhhhccCc--eEEEEEEchhHHHHHHHHhh
Q 021023 91 DLVDDCFNHFTSICEKEENKEK--MRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (318)
...+++...++.+.+. +... +|++.|||+||.+|+..|..
T Consensus 207 S~r~qvl~~V~~l~~~--Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLER--YKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHh--CCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3455666666666332 2333 49999999999999998854
No 219
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.54 E-value=0.005 Score=44.03 Aligned_cols=65 Identities=14% Similarity=0.277 Sum_probs=51.2
Q ss_pred cccEEEEEeCCCcccChHHHHHHHHHhcC---CCceEEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 229 SIPFIVLHGEEDKVTDKAVSVQLFKVASS---SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
++++|-|-|+.|.++.+.+.....+.+.+ .....++.+++||+..+.-+ ...+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-RWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-hhhhhhhHHHHHHHHh
Confidence 56788899999999999887766665533 34567788999999988444 6788899999999875
No 220
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.50 E-value=0.042 Score=42.64 Aligned_cols=132 Identities=20% Similarity=0.204 Sum_probs=88.7
Q ss_pred ecCCeeEEEEeecCCC--CCCceEEEEEccCCcccccchhHH---H-----------HHHHhcCcEEEEecCC-CCcCCC
Q 021023 18 NSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNST---A-----------IRLANEGYACYGIDYQ-GHGKSA 80 (318)
Q Consensus 18 ~~~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~~~~---~-----------~~l~~~g~~v~~~d~~-G~G~s~ 80 (318)
..++..+.+++|.... ...+|..+.+.|.++.+..-+..| . ..| +. ..++.+|-| |.|.|-
T Consensus 10 vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl-k~-adllfvDnPVGaGfSy 87 (414)
T KOG1283|consen 10 VRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL-KD-ADLLFVDNPVGAGFSY 87 (414)
T ss_pred eecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh-hh-ccEEEecCCCcCceee
Confidence 3456677777775432 356788999999876654321222 1 122 22 567888877 777775
Q ss_pred --CCCCCCCChHhHHHHHHHHHHHHHh-hhhccCceEEEEEEchhHHHHHHHHhhC---------CCCcCEEEEeCCCcc
Q 021023 81 --GLSGYIDNFDDLVDDCFNHFTSICE-KEENKEKMRYLLGESMGGAMVLLLHRKK---------PDYFDGAVLVAPMCK 148 (318)
Q Consensus 81 --~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---------p~~v~~~vl~~~~~~ 148 (318)
+...+..+..+.+.|+.++++.+.. ++++...|++|+..|+||-+|..++... ...+.+++|-+++..
T Consensus 88 Vdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 88 VDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 4444455788899999999987743 3556778999999999999998887532 124677888777765
Q ss_pred ccc
Q 021023 149 IAE 151 (318)
Q Consensus 149 ~~~ 151 (318)
..+
T Consensus 168 P~D 170 (414)
T KOG1283|consen 168 PED 170 (414)
T ss_pred hhH
Confidence 543
No 221
>PLN02571 triacylglycerol lipase
Probab=96.42 E-value=0.0054 Score=49.85 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=18.0
Q ss_pred eEEEEEEchhHHHHHHHHhh
Q 021023 113 MRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~ 132 (318)
++++.|||+||.+|...|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 78999999999999998864
No 222
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.41 E-value=0.054 Score=37.41 Aligned_cols=80 Identities=20% Similarity=0.105 Sum_probs=51.7
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhcCc-EEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceE
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANEGY-ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 114 (318)
+...||+.-||+..+... ..+ .+ ..++ -++++|++..... .++. ..+.+
T Consensus 10 gd~LIvyFaGwgtpps~v-~HL--il-peN~dl~lcYDY~dl~ld-------fDfs-------------------Ay~hi 59 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAV-NHL--IL-PENHDLLLCYDYQDLNLD-------FDFS-------------------AYRHI 59 (214)
T ss_pred CCEEEEEEecCCCCHHHH-hhc--cC-CCCCcEEEEeehhhcCcc-------cchh-------------------hhhhh
Confidence 344789999999887755 433 12 3334 4678888744211 1111 23567
Q ss_pred EEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 115 YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
.++++|||-.+|-++....+ ++..+.+++..
T Consensus 60 rlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 60 RLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 89999999999999887765 66666666543
No 223
>PLN02310 triacylglycerol lipase
Probab=96.32 E-value=0.016 Score=47.07 Aligned_cols=21 Identities=33% Similarity=0.436 Sum_probs=18.4
Q ss_pred ceEEEEEEchhHHHHHHHHhh
Q 021023 112 KMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+|.+.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999988853
No 224
>PLN02408 phospholipase A1
Probab=96.13 E-value=0.0098 Score=47.67 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=18.4
Q ss_pred ceEEEEEEchhHHHHHHHHhh
Q 021023 112 KMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+|++.|||+||.+|..+|..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999998864
No 225
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.12 E-value=0.032 Score=51.20 Aligned_cols=99 Identities=15% Similarity=0.146 Sum_probs=66.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceE
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 114 (318)
...|+++|+|..-+..... ..++..| ..|-+|.......+..+++..+.-...-++.+ + ...++
T Consensus 2121 se~~~~Ffv~pIEG~tt~l-~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkv--Q---P~GPY 2184 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTAL-ESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKV--Q---PEGPY 2184 (2376)
T ss_pred ccCCceEEEeccccchHHH-HHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhc--C---CCCCe
Confidence 4567899999987766544 5554444 23444443333333357887777766666666 2 56799
Q ss_pred EEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCccc
Q 021023 115 YLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~ 149 (318)
.++|+|+|+.++..+|.. ..+....+|++++...+
T Consensus 2185 rl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2185 RLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred eeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 999999999999998854 23345668888876544
No 226
>PLN02934 triacylglycerol lipase
Probab=95.96 E-value=0.013 Score=48.73 Aligned_cols=22 Identities=32% Similarity=0.554 Sum_probs=19.7
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..++++.|||+||.+|..++.
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHH
Confidence 6679999999999999998874
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.83 E-value=0.016 Score=48.38 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
..+++..+++.... .....++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~--~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKD--RGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccc--cCCcceEEEeccCHHHHHHHHHHHH
Confidence 34555555554421 0123479999999999999988853
No 228
>PLN02324 triacylglycerol lipase
Probab=95.71 E-value=0.026 Score=45.97 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=18.3
Q ss_pred ceEEEEEEchhHHHHHHHHhh
Q 021023 112 KMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+|.+.|||+||.+|...|..
T Consensus 215 ~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999998853
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.59 E-value=0.048 Score=43.65 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=31.6
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCC-----CCcCEEEEeCCCccc
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKP-----DYFDGAVLVAPMCKI 149 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~ 149 (318)
+.+|+.|+|||+|+.+...+...-. ..|..+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 6778999999999999888765433 347889999877654
No 230
>PF03283 PAE: Pectinacetylesterase
Probab=95.39 E-value=0.5 Score=38.57 Aligned_cols=56 Identities=16% Similarity=0.053 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHh----hCCCCcCEEEEeCCCcc
Q 021023 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR----KKPDYFDGAVLVAPMCK 148 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~----~~p~~v~~~vl~~~~~~ 148 (318)
...+.++++++....-...++++|.|.|.||.-++..+- ..|..++-..+.++...
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 445777888876552335689999999999998877553 45644444444444433
No 231
>PLN02802 triacylglycerol lipase
Probab=95.37 E-value=0.034 Score=46.38 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=18.3
Q ss_pred ceEEEEEEchhHHHHHHHHhh
Q 021023 112 KMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+|++.|||+||.+|...|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 378999999999999988764
No 232
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.34 E-value=0.16 Score=40.37 Aligned_cols=64 Identities=9% Similarity=0.181 Sum_probs=48.1
Q ss_pred CcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 226 DEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 226 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
.++..|-.|+.|+.|.+.++..+.-.++.+++ ..-+.++|+..|.... . -+.+.+..|++....
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~n----~---~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLIN----Q---FIKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhhH----H---HHHHHHHHHHHHHhc
Confidence 56789999999999999999998888899853 3567888999997765 1 244555566655443
No 233
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.29 E-value=0.023 Score=45.68 Aligned_cols=87 Identities=11% Similarity=0.101 Sum_probs=47.2
Q ss_pred CCceEEEEEccCCc-ccccchhHHHHHHHhc--CcEEEEecCCCCcCCCCCCCCC-CChHhHHHHHHHHHHHHHhhhhcc
Q 021023 35 EPKALIFICHGYAM-ECSIGMNSTAIRLANE--GYACYGIDYQGHGKSAGLSGYI-DNFDDLVDDCFNHFTSICEKEENK 110 (318)
Q Consensus 35 ~~~~~iv~~hG~~~-~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~~~~~~~ 110 (318)
+++-.+|+.||+-+ +...| ..-+...... +..++.-.+.| ......... .--...++++...+... .
T Consensus 78 k~~HLvVlthGi~~~~~~~~-~~~~~~~~kk~p~~~iv~~g~~~--~~~~T~~Gv~~lG~Rla~~~~e~~~~~------s 148 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYW-KEKIEQMTKKMPDKLIVVRGKMN--NMCQTFDGVDVLGERLAEEVKETLYDY------S 148 (405)
T ss_pred CCceEEEeccccccccHHHH-HHHHHhhhcCCCcceEeeecccc--chhhccccceeeecccHHHHhhhhhcc------c
Confidence 56678999999888 34434 5555555444 33333333332 221111110 01122344444444444 4
Q ss_pred CceEEEEEEchhHHHHHHHH
Q 021023 111 EKMRYLLGESMGGAMVLLLH 130 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a 130 (318)
.+++-.+|||+||.++..+.
T Consensus 149 i~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cceeeeeeeecCCeeeeEEE
Confidence 68999999999998876543
No 234
>PLN02753 triacylglycerol lipase
Probab=95.21 E-value=0.036 Score=46.47 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=18.7
Q ss_pred CceEEEEEEchhHHHHHHHHh
Q 021023 111 EKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
..+|.+.|||+||.+|...|.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 458999999999999999885
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=95.13 E-value=0.13 Score=38.74 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=39.1
Q ss_pred CcEEEEecCCCC-cCCC--CCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 65 GYACYGIDYQGH-GKSA--GLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 65 g~~v~~~d~~G~-G~s~--~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
|+.+..+++|.. +--. +......+..+-++.+.+.|+.... ..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 577788888862 1100 1111123444545555555554311 56789999999999999887754
No 236
>PLN02719 triacylglycerol lipase
Probab=95.13 E-value=0.038 Score=46.15 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=18.1
Q ss_pred ceEEEEEEchhHHHHHHHHh
Q 021023 112 KMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~ 131 (318)
.+|.+.|||+||.+|...|.
T Consensus 298 ~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 47999999999999999885
No 237
>PLN02847 triacylglycerol lipase
Probab=95.06 E-value=0.047 Score=46.46 Aligned_cols=24 Identities=25% Similarity=0.333 Sum_probs=20.2
Q ss_pred ccCceEEEEEEchhHHHHHHHHhh
Q 021023 109 NKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
++.-+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 356689999999999999988754
No 238
>PLN02761 lipase class 3 family protein
Probab=95.05 E-value=0.053 Score=45.44 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=18.0
Q ss_pred ceEEEEEEchhHHHHHHHHh
Q 021023 112 KMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~ 131 (318)
.+|.+.|||+||.+|...|.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 47999999999999998884
No 239
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.89 E-value=0.047 Score=43.97 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=28.1
Q ss_pred HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 90 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
..+.+++..+++.. ..-++.+.|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~------~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY------PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc------CCcEEEEecCChHHHHHHHHHHH
Confidence 34555666666555 67799999999999999988853
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.40 E-value=0.12 Score=39.48 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=27.8
Q ss_pred hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCC
Q 021023 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (318)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (318)
.+...++.+.|||+||.+|..+..++. +-.+..-+|.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 346779999999999999999888774 4444444443
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.40 E-value=0.12 Score=39.48 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=27.8
Q ss_pred hccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCC
Q 021023 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (318)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (318)
.+...++.+.|||+||.+|..+..++. +-.+..-+|.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 346779999999999999999888774 4444444443
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.24 E-value=0.38 Score=41.04 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh-----CCC------CcCEEEEeCCCc
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK-----KPD------YFDGAVLVAPMC 147 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~~ 147 (318)
.+.-...+++.+....-.+.++++.+||||||.++=.+... .|+ .-.|+++++.+-
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 34444455555533322247799999999999888766543 232 356777776553
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.17 E-value=0.29 Score=41.57 Aligned_cols=67 Identities=15% Similarity=0.216 Sum_probs=50.5
Q ss_pred cccEEEEEeCCCcccChHHHHHHHHHhcC----------CCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHhc
Q 021023 229 SIPFIVLHGEEDKVTDKAVSVQLFKVASS----------SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVA 297 (318)
Q Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~~ 297 (318)
--.+++.||..|.++|+..+..+++++.. .-.++..+||.+|+.--.-+.. -.....|.+|+++-..
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~--~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDP--FDALTALVDWVENGKA 429 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCC--CCHHHHHHHHHhCCCC
Confidence 45899999999999999888887776632 1358889999999976543321 2488999999986543
No 244
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=92.05 E-value=1.9 Score=27.70 Aligned_cols=82 Identities=13% Similarity=0.034 Sum_probs=53.4
Q ss_pred hHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhH--HHHHHHHhh
Q 021023 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGG--AMVLLLHRK 132 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~ 132 (318)
..+.+.+...||..-.+.++..|.+....-.....+.=...+..+++.. ...+++++|-|--. -+-..+|.+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f------P~~kfiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF------PERKFILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC------CCCcEEEEeeCCCcCHHHHHHHHHH
Confidence 5666667667787777777777555322111011123345566666666 88899999999654 344456788
Q ss_pred CCCCcCEEEE
Q 021023 133 KPDYFDGAVL 142 (318)
Q Consensus 133 ~p~~v~~~vl 142 (318)
+|++|.++.+
T Consensus 88 ~P~~i~ai~I 97 (100)
T PF09949_consen 88 FPGRILAIYI 97 (100)
T ss_pred CCCCEEEEEE
Confidence 9999988764
No 245
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=91.79 E-value=2 Score=33.82 Aligned_cols=95 Identities=11% Similarity=-0.006 Sum_probs=51.7
Q ss_pred ceEEEEEccCCcccccc-----hhHHHHHH-HhcCcEEEEecCCCCcCC--------CCCCC---CCCChHhHHHHHHHH
Q 021023 37 KALIFICHGYAMECSIG-----MNSTAIRL-ANEGYACYGIDYQGHGKS--------AGLSG---YIDNFDDLVDDCFNH 99 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~-----~~~~~~~l-~~~g~~v~~~d~~G~G~s--------~~~~~---~~~~~~~~~~d~~~~ 99 (318)
|..|||+-|.+.+...- ...+.+.+ ...+-..+++=.+|.|.. ..... ....-....+.+..+
T Consensus 1 k~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 1 KRIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred CcEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 34678888876554322 12344444 222335555666788772 11000 000112233445555
Q ss_pred HHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 100 FTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 100 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
...+..+- ....+|.++|+|-|+..|-.++..
T Consensus 81 y~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 81 YRFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 55553322 266789999999999999998864
No 246
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=90.85 E-value=4.3 Score=32.15 Aligned_cols=97 Identities=16% Similarity=0.031 Sum_probs=56.7
Q ss_pred CCceEEEEEccCCc----ccccchhHHHHHHHh-cCcEEEEecCCCCcCCCCCC----------CCCC--ChHhHHHHHH
Q 021023 35 EPKALIFICHGYAM----ECSIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLS----------GYID--NFDDLVDDCF 97 (318)
Q Consensus 35 ~~~~~iv~~hG~~~----~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~----------~~~~--~~~~~~~d~~ 97 (318)
..+..|+|+-|... ..-.-.-.+...|.. .+-.++++-.+|.|.-.-.. .... --..+.+.+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 56778888888432 221111345555654 47888888889988653110 0000 0112234455
Q ss_pred HHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 98 ~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+...|..+.+ ..++|+++|+|-|+..|--+|..
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 55555433222 67799999999999999877754
No 247
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=90.54 E-value=1.2 Score=37.23 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=60.0
Q ss_pred eEEEEeecCC-CCCCceEEEEEccCCccc---ccchhHHHHHHHhc-CcEEEEecCCC--Cc-----CCCCCCCCCCChH
Q 021023 23 KLFTCSWIPQ-NQEPKALIFICHGYAMEC---SIGMNSTAIRLANE-GYACYGIDYQG--HG-----KSAGLSGYIDNFD 90 (318)
Q Consensus 23 ~l~~~~~~p~-~~~~~~~iv~~hG~~~~~---~~~~~~~~~~l~~~-g~~v~~~d~~G--~G-----~s~~~~~~~~~~~ 90 (318)
-|...+|.|. +.....++|++-|+|.-+ ..- -.=.+.|+.. .--|+.+++|= +| ..+..++. ..+-
T Consensus 120 CLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLd-vYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGN-mGl~ 197 (601)
T KOG4389|consen 120 CLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLD-VYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGN-MGLL 197 (601)
T ss_pred ceEEEEeccCCCCCCceEEEEEEcCccccCCccee-eeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCc-cchH
Confidence 3566677773 334456788898876322 211 1123445444 34566667761 11 12111221 1222
Q ss_pred hHHHHHHHHHHHHHhhh---hccCceEEEEEEchhHHHHHHHHhh--CCCCcCEEEEeCCCcc
Q 021023 91 DLVDDCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCK 148 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (318)
|-.-++++++++. ..+..++.|+|.|.|+.-...-... -...++..|+-++...
T Consensus 198 ----DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 198 ----DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred ----HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 2223445553321 2256789999999998654332221 1134666666665543
No 248
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=86.82 E-value=5.7 Score=26.81 Aligned_cols=59 Identities=15% Similarity=0.130 Sum_probs=35.7
Q ss_pred CCceEEEEEccCCcccccch-hHHHHHHHhcCcE-------EEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 35 EPKALIFICHGYAMECSIGM-NSTAIRLANEGYA-------CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~-------v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
..+|.|+-+||+.|.+..|. +-+++.|-..|.. +...|+|- ...++++-+++...|...
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP~----------~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFPH----------NSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCCC----------chHHHHHHHHHHHHHHHH
Confidence 67899999999999998773 3344554444421 12223321 125666667777666554
No 249
>PRK12467 peptide synthase; Provisional
Probab=84.54 E-value=11 Score=41.91 Aligned_cols=98 Identities=13% Similarity=0.004 Sum_probs=66.7
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
.+.+++.|+..+....+ ..+...+.. +..++.+..++.-.... ...+++..+....+.+.+. + ...+..+
T Consensus 3692 ~~~l~~~h~~~r~~~~~-~~l~~~l~~-~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~--~---~~~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDY-EPLAVILEG-DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQ--Q---AKGPYGL 3761 (3956)
T ss_pred ccceeeechhhcchhhh-HHHHHHhCC-CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHh--c---cCCCeee
Confidence 45699999988877756 777777744 47888888766532221 1136677777777777666 2 3467899
Q ss_pred EEEchhHHHHHHHHhh---CCCCcCEEEEeC
Q 021023 117 LGESMGGAMVLLLHRK---KPDYFDGAVLVA 144 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~---~p~~v~~~vl~~ 144 (318)
.|+|+||.++..++.. ..+.+..+.++.
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999999999888753 334455555553
No 250
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.43 E-value=4.5 Score=34.27 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=31.9
Q ss_pred cCceEEEEEEchhHHHHHHHHhh-----CCCCcCEEEEeCCCccc
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRK-----KPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~~ 149 (318)
+.+||.|+|+|+|+.+...+... .-..|..+++++.+...
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 78899999999999998866542 23458889999887765
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=83.94 E-value=7.1 Score=29.05 Aligned_cols=72 Identities=10% Similarity=-0.057 Sum_probs=47.4
Q ss_pred HHHHHHhcCc-EEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEch----hHHHHHHHHh
Q 021023 57 TAIRLANEGY-ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESM----GGAMVLLLHR 131 (318)
Q Consensus 57 ~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~ 131 (318)
....+...|. .|+..+.+.... ++.+.+++-+.++++.. + ..++++|+|. |..++.++|.
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~------~-p~lVL~~~t~~~~~grdlaprlAa 132 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKI------G-VDLILTGKQSIDGDTGQVGPLLAE 132 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHh------C-CCEEEEcCCcccCCcCcHHHHHHH
Confidence 3344445565 677776654321 46778888888877765 4 5789999998 8889999887
Q ss_pred hCC-CCcCEEEEe
Q 021023 132 KKP-DYFDGAVLV 143 (318)
Q Consensus 132 ~~p-~~v~~~vl~ 143 (318)
+.. ..+..++-+
T Consensus 133 rLga~lvsdv~~l 145 (202)
T cd01714 133 LLGWPQITYVSKI 145 (202)
T ss_pred HhCCCccceEEEE
Confidence 642 234445444
No 252
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=83.36 E-value=15 Score=26.63 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=30.6
Q ss_pred CCceEEEEEccCCcccccch-hHHHHHHHhcCcEEEEecC
Q 021023 35 EPKALIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~ 73 (318)
..++.+|++.|++++...-. ..+.+.|.+.|++++..|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 45678999999998876442 4566778888999999984
No 253
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=81.09 E-value=1.9 Score=35.39 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=46.8
Q ss_pred hHHhhcCcccccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccC-CccchHHHHHHHHHHHH
Q 021023 220 DLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGE-PEENTQIVFRDILNWLD 293 (318)
Q Consensus 220 ~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-p~~~~~~~~~~i~~fl~ 293 (318)
++...+++-...+|+|+|+.|+..-... .+-+ ...++.+.+.||++|...+.. |+....+....|.+|..
T Consensus 342 dI~~Wvr~~~~rmlFVYG~nDPW~A~~f--~l~~--g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 342 DIDRWVRNNGPRMLFVYGENDPWSAEPF--RLGK--GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHHhCCCeEEEEeCCCCCcccCcc--ccCC--CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 4444455556689999999998753221 1111 225778888899999877642 44566778888888864
No 254
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=80.21 E-value=16 Score=27.13 Aligned_cols=42 Identities=14% Similarity=0.267 Sum_probs=29.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCc-EEEEecCCCC
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGY-ACYGIDYQGH 76 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~ 76 (318)
+..-+|++.||...++...+.-+-..|.++|| .|++...-|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 55678999999887776564555556667788 6776665544
No 255
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=79.96 E-value=6.6 Score=23.62 Aligned_cols=45 Identities=11% Similarity=0.032 Sum_probs=30.8
Q ss_pred hHhHHHHHHHHHHHHHhhhhc-cCceEEEEEEchhHHHHHHHHhhC
Q 021023 89 FDDLVDDCFNHFTSICEKEEN-KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 89 ~~~~~~d~~~~l~~l~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
..-..+.+...+++++++... +.+++.++|-|-|=.+|.+.++.+
T Consensus 16 P~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 16 PVGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 445567788888888665443 447899999999999998877664
No 256
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=79.52 E-value=19 Score=30.07 Aligned_cols=37 Identities=16% Similarity=0.018 Sum_probs=28.1
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKS 79 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 79 (318)
|||+|+.... .| +.+++.|+++|+.|.++-..+.+..
T Consensus 2 il~~~~~~p~--~~-~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPG--QF-RHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCch--hH-HHHHHHHHHCCCEEEEEecCCCCCC
Confidence 7889875432 25 8999999999999998877666543
No 257
>PLN02748 tRNA dimethylallyltransferase
Probab=79.08 E-value=17 Score=31.05 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=50.2
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEec----CCCC--cCCC----------------CCCCCCCChHh
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGID----YQGH--GKSA----------------GLSGYIDNFDD 91 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d----~~G~--G~s~----------------~~~~~~~~~~~ 91 (318)
..++.+|++-|-.+++. ..++..|+.+ +..++..| |+|. |... -.+...++..+
T Consensus 19 ~~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 44566888888887777 4566667665 56788888 3332 1111 11223478899
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEc
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGES 120 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S 120 (318)
+.++...+|+.+..+ ..-.+|+|-|
T Consensus 96 F~~~A~~~I~~I~~r----gk~PIlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSR----NGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhc----CCCeEEEcCh
Confidence 999999999988553 3344555543
No 258
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=76.92 E-value=4.5 Score=31.49 Aligned_cols=48 Identities=27% Similarity=0.266 Sum_probs=32.6
Q ss_pred HHHhhhhccCceEEEEEEchhHHHHHHHHh---hCCCCcCEEEEeCCCccc
Q 021023 102 SICEKEENKEKMRYLLGESMGGAMVLLLHR---KKPDYFDGAVLVAPMCKI 149 (318)
Q Consensus 102 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~~ 149 (318)
.+...+.....+++|.|.|+|++-+..... ..-+++.+++..+|+...
T Consensus 99 ~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 99 RWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 333334445568999999999876655432 233569999999987654
No 259
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=74.13 E-value=6.2 Score=27.85 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=26.8
Q ss_pred ceEEEEEccCCcccccch-hHHHHHHHhcCcEEEEecC
Q 021023 37 KALIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~ 73 (318)
+|.+|++-|.+++...-. ..+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 468999999998876432 4566677778999999974
No 260
>PRK02399 hypothetical protein; Provisional
Probab=73.47 E-value=53 Score=27.47 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=58.7
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC---------CCCCh-------------HhHHHHHHH
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG---------YIDNF-------------DDLVDDCFN 98 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~~-------------~~~~~d~~~ 98 (318)
|++=|...+...-+..+.+.+.++|..|+.+|.-..|....... ...++ +.+.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 45556666655443566666767799999999844442211100 00011 222233333
Q ss_pred HHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEe
Q 021023 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLV 143 (318)
Q Consensus 99 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 143 (318)
++..+ .......-++-+|-|.|..++.......|=-+-++++.
T Consensus 86 ~v~~L--~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVREL--YERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHH--HhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 44333 12224667889999999999999988887656555543
No 261
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=73.41 E-value=18 Score=27.17 Aligned_cols=41 Identities=2% Similarity=-0.062 Sum_probs=30.0
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCC
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQG 75 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G 75 (318)
+..+.|+|+.-.+.....|...+...|.+. |+.+..++...
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 345679999877765554557777888888 99998887643
No 262
>PLN02840 tRNA dimethylallyltransferase
Probab=73.25 E-value=28 Score=29.33 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=47.4
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecC----CCC--cCCC----------------CCCCCCCChHh
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY----QGH--GKSA----------------GLSGYIDNFDD 91 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~G~--G~s~----------------~~~~~~~~~~~ 91 (318)
..+..+|++-|-.+++. ..++..|++. +..++..|- +|. |... -.+...++..+
T Consensus 18 ~~~~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~ 94 (421)
T PLN02840 18 TKKEKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGA 94 (421)
T ss_pred ccCCeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHH
Confidence 34455788888777766 4466666655 456777774 222 1111 11223468889
Q ss_pred HHHHHHHHHHHHHhhhhccCceEEEEEEc
Q 021023 92 LVDDCFNHFTSICEKEENKEKMRYLLGES 120 (318)
Q Consensus 92 ~~~d~~~~l~~l~~~~~~~~~~~~l~G~S 120 (318)
+.++....++.+.++ ....+|+|-+
T Consensus 95 F~~~A~~~I~~i~~r----gkiPIvVGGT 119 (421)
T PLN02840 95 FFDDARRATQDILNR----GRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHHhc----CCCEEEEcCc
Confidence 999999999988553 3334555533
No 263
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=73.09 E-value=3 Score=36.11 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=33.1
Q ss_pred cccEEEEEeCCCcccChHHHHHHHHHhc----C--CCceEEEecCCcccccc
Q 021023 229 SIPFIVLHGEEDKVTDKAVSVQLFKVAS----S--SDKTMKLYEGMWHGLLY 274 (318)
Q Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~gH~~~~ 274 (318)
..|.+++||..|.++|.....+-+-.+. . ....+++++++.|+-.+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 6799999999999999865444333221 1 34678888999998653
No 264
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=73.05 E-value=23 Score=28.46 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=39.9
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCC----C--CcCCC----------------CCCCCCCChHhHHH
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQ----G--HGKSA----------------GLSGYIDNFDDLVD 94 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~----G--~G~s~----------------~~~~~~~~~~~~~~ 94 (318)
+.+|++-|-.+++. ..++..|++. +..++..|-. + +|... ......++..++.+
T Consensus 4 ~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 4 PKVIVIVGPTASGK---TALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred ceEEEEECCCCcCH---HHHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 45888888888777 5567777666 5677777653 1 11111 11122356777888
Q ss_pred HHHHHHHHHHh
Q 021023 95 DCFNHFTSICE 105 (318)
Q Consensus 95 d~~~~l~~l~~ 105 (318)
+....++.+.+
T Consensus 81 ~a~~~i~~i~~ 91 (307)
T PRK00091 81 DALAAIADILA 91 (307)
T ss_pred HHHHHHHHHHh
Confidence 88888887643
No 265
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=72.62 E-value=23 Score=26.22 Aligned_cols=72 Identities=17% Similarity=0.153 Sum_probs=45.6
Q ss_pred HHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhC-C-
Q 021023 57 TAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK-P- 134 (318)
Q Consensus 57 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p- 134 (318)
..+.+..++++++.+|-+|... .-.+..+++..+++.+ ....++++=-+..+.-.+..+..+ .
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~------~~~~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEAL------NPDEVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHH------SSSEEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhc------CCccceEEEecccChHHHHHHHHHhhc
Confidence 3445556689999999998742 3455677787877777 566666666665555555444332 1
Q ss_pred CCcCEEEEe
Q 021023 135 DYFDGAVLV 143 (318)
Q Consensus 135 ~~v~~~vl~ 143 (318)
-.+.++|+.
T Consensus 140 ~~~~~lIlT 148 (196)
T PF00448_consen 140 FGIDGLILT 148 (196)
T ss_dssp SSTCEEEEE
T ss_pred ccCceEEEE
Confidence 237888865
No 266
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=72.11 E-value=58 Score=27.29 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=59.2
Q ss_pred EEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCC---------CCC-------------hHhHHHHHHHH
Q 021023 42 ICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY---------IDN-------------FDDLVDDCFNH 99 (318)
Q Consensus 42 ~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~~~-------------~~~~~~d~~~~ 99 (318)
++=|...+...-+..+.+.+.+.|..++.+|.-=.+.+...... ..+ ++.+.+-+..+
T Consensus 5 ~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~ 84 (403)
T PF06792_consen 5 AIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARF 84 (403)
T ss_pred EEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHH
Confidence 34455555544446777778888999999997544443321100 001 11222333344
Q ss_pred HHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEe
Q 021023 100 FTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLV 143 (318)
Q Consensus 100 l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 143 (318)
+..+ .......-++-+|-|.|..++.......|=-+-++++.
T Consensus 85 v~~l--~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 85 VSDL--YDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHH--HhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 4444 12223556889999999999999988877656665543
No 267
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=72.06 E-value=14 Score=27.59 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=29.8
Q ss_pred ceEEEEEccCCccccc--chhHHHHHHHhcCcEEEEecC
Q 021023 37 KALIFICHGYAMECSI--GMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+.|.|++-.+.+... |.......|.+.|+.+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 6689999988877765 556777888889999888876
No 268
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=71.97 E-value=24 Score=27.32 Aligned_cols=40 Identities=15% Similarity=0.012 Sum_probs=27.1
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcE-EEEecCC
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYA-CYGIDYQ 74 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 74 (318)
++.+.|++++-.++....+...+.+.|.+.|+. |-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 456779999876655544446677778788884 5666664
No 269
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=71.51 E-value=19 Score=27.46 Aligned_cols=39 Identities=15% Similarity=-0.023 Sum_probs=28.0
Q ss_pred CceEEEEEccCCc--ccccchhHHHHHHHhcCcEEEEecCC
Q 021023 36 PKALIFICHGYAM--ECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 36 ~~~~iv~~hG~~~--~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
..|.|+|++-.+. ....|...+...|.+.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3567999997663 33445566777788889999888765
No 270
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=69.95 E-value=27 Score=24.84 Aligned_cols=49 Identities=16% Similarity=0.085 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCC
Q 021023 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (318)
.+++.++++.++. ...+|+++|-|..|...+.++...++.+..++=.+|
T Consensus 54 ~~~l~~~L~~~~~----~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKA----EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHH----TT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHH----cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3444455544433 567899999999999988888776776777765554
No 271
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=69.61 E-value=9.7 Score=27.39 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=21.0
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
+...-.+.|-|.|+.++..++...+
T Consensus 24 gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 24 GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 5567789999999999999988643
No 272
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=68.99 E-value=7.9 Score=25.67 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=28.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhc-CcEEEEecC--CCCcCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY--QGHGKS 79 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~--~G~G~s 79 (318)
+|++.|.++++. ..+++.|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecceEEecccc
Confidence 688999999988 5578888887 999999987 444433
No 273
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=68.36 E-value=9.2 Score=30.65 Aligned_cols=24 Identities=17% Similarity=0.218 Sum_probs=20.7
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.++|.|+|+.++..++...
T Consensus 41 gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 41 GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCC
Confidence 566678999999999999999864
No 274
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=68.19 E-value=10 Score=27.91 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=19.9
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.++|-|.||.+|..++...
T Consensus 25 ~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 25 GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred CCCcceEEEECHHHHHHHHHHcCC
Confidence 455678999999999999998753
No 275
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=68.03 E-value=19 Score=26.08 Aligned_cols=29 Identities=10% Similarity=0.186 Sum_probs=11.8
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEEEE
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G 118 (318)
+.+.+.+-+..+++.+ +...+..||+++-
T Consensus 72 ~~~~~~~~~~~fv~~i--R~~hP~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTI--REAHPDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHH--HTT-SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHH--HHhCCCCCEEEEe
Confidence 3344444455555555 2222334444443
No 276
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=67.95 E-value=43 Score=26.83 Aligned_cols=74 Identities=9% Similarity=0.093 Sum_probs=47.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC----CCC--cCCC----------------CCCCCCCChHhHHHHHH
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY----QGH--GKSA----------------GLSGYIDNFDDLVDDCF 97 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~----~G~--G~s~----------------~~~~~~~~~~~~~~d~~ 97 (318)
||++-|-.+++. ..++-.|++++..++..|- +|. |... -.+...++..++.++..
T Consensus 6 ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a~ 82 (300)
T PRK14729 6 IVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEAL 82 (300)
T ss_pred EEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHHH
Confidence 788888887777 4566677777567888883 332 1111 12233478888999999
Q ss_pred HHHHHHHhhhhccCceEEEEEEc
Q 021023 98 NHFTSICEKEENKEKMRYLLGES 120 (318)
Q Consensus 98 ~~l~~l~~~~~~~~~~~~l~G~S 120 (318)
..++.+..+ ....+|+|-|
T Consensus 83 ~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 83 KIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHC----CCCEEEEeCc
Confidence 999988542 3334566543
No 277
>PRK10279 hypothetical protein; Provisional
Probab=66.97 E-value=9.2 Score=30.52 Aligned_cols=24 Identities=13% Similarity=0.137 Sum_probs=20.9
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.++|.|+|+.++..+|...
T Consensus 31 gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 31 GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 667788999999999999999754
No 278
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=66.86 E-value=35 Score=27.22 Aligned_cols=37 Identities=19% Similarity=0.175 Sum_probs=25.5
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCC
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA 80 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 80 (318)
|++-|..+... ...+..|.+.||.|+++|---.|...
T Consensus 3 iLVtGGAGYIG---SHtv~~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 3 VLVTGGAGYIG---SHTVRQLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred EEEecCcchhH---HHHHHHHHHCCCeEEEEecCCCCCHH
Confidence 34445444433 45667788899999999988766544
No 279
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.26 E-value=14 Score=28.00 Aligned_cols=24 Identities=17% Similarity=0.041 Sum_probs=19.8
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.++|-|.|+.++..++...
T Consensus 26 gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 26 GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred CCCceEEEEeCHHHHHHHHHHcCC
Confidence 455667999999999999998754
No 280
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=64.46 E-value=9.3 Score=30.38 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=18.8
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..+-.++|||+|-+.|+.++.
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhC
Confidence 6778899999999998887764
No 281
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=63.78 E-value=12 Score=30.10 Aligned_cols=24 Identities=17% Similarity=0.185 Sum_probs=21.2
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.+.|-|+|+.++..+|...
T Consensus 37 gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 37 GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred CCCccEEEecCHHHHHHHHHHcCC
Confidence 678889999999999999999754
No 282
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=63.44 E-value=14 Score=29.04 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=20.4
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.+.|.|+|+.++..+|...
T Consensus 36 gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 36 GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred CCCccEEEEECHHHHHHHHHHcCC
Confidence 566678999999999999999764
No 283
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=63.30 E-value=5.7 Score=32.04 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=18.6
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..+-.++|||+|=+.|+.++.
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp THCESEEEESTTHHHHHHHHTT
T ss_pred ccccceeeccchhhHHHHHHCC
Confidence 6788899999999988887654
No 284
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=63.29 E-value=10 Score=30.16 Aligned_cols=22 Identities=14% Similarity=0.111 Sum_probs=18.8
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..+..++|||+|=..|+.++.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhC
Confidence 6688999999999988887764
No 285
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=61.76 E-value=93 Score=25.83 Aligned_cols=89 Identities=13% Similarity=0.051 Sum_probs=58.3
Q ss_pred CceEEEEEccCCccc-------ccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhh
Q 021023 36 PKALIFICHGYAMEC-------SIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEE 108 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~-------~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~ 108 (318)
+...||++||-+.++ +.| ..+++.+.++|. +-.+|.-..|.-+ .+++-+.-+..++...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW-~~l~~~~~~r~l-ip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----- 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQW-QELADLIKERGL-IPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----- 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHH-HHHHHHHHHcCC-eeeeehhhhhhcc-------chHHHHHHHHHHHHhC-----
Confidence 456799999866543 446 888888888864 5567776555443 3444444454444432
Q ss_pred ccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEEeCCCc
Q 021023 109 NKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (318)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (318)
+-.++..|+.=.+++ |.+||-++.+++...
T Consensus 236 ----~~~lva~S~SKnfgL-----YgERVGa~~vva~~~ 265 (396)
T COG1448 236 ----PELLVASSFSKNFGL-----YGERVGALSVVAEDA 265 (396)
T ss_pred ----CcEEEEehhhhhhhh-----hhhccceeEEEeCCH
Confidence 238888898776654 568899999886543
No 286
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=61.23 E-value=20 Score=25.91 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=20.5
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
+...-.++|.|.|+.++..++...+
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 4556789999999999999987654
No 287
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=61.22 E-value=80 Score=24.95 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=50.3
Q ss_pred EccCCcccccchhHHHHHHHhcCcEEEEe------cCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 43 CHGYAMECSIGMNSTAIRLANEGYACYGI------DYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 43 ~hG~~~~~~~~~~~~~~~l~~~g~~v~~~------d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
+||.-+++. ....|...|++|.++ +.+|+|...+... .. +++..+++.+.+......-..++
T Consensus 11 v~G~vGn~A-----A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~----~~---e~l~~~l~~l~~~~~~~~~davl 78 (281)
T COG2240 11 VYGSVGNSA-----AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVM----PP---EQLADLLNGLEAIDKLGECDAVL 78 (281)
T ss_pred eecccccHh-----HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCC----CH---HHHHHHHHHHHhcccccccCEEE
Confidence 456555543 334555668876554 6788888655432 22 33334444442222223345666
Q ss_pred EEEc----hhHHHHHHHHhhCCCCcCEEEEeCCCccccc
Q 021023 117 LGES----MGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (318)
Q Consensus 117 ~G~S----~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (318)
.|+= .+-.++-.+.......-+.+++++|...-..
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 6652 2333333333322234568899999876544
No 288
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=60.58 E-value=82 Score=25.38 Aligned_cols=76 Identities=18% Similarity=0.241 Sum_probs=47.9
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecC----CCC----cCCC--------------CCCCCCCChHhHHH
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY----QGH----GKSA--------------GLSGYIDNFDDLVD 94 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~G~----G~s~--------------~~~~~~~~~~~~~~ 94 (318)
+.++++-|-.+++. ..++-.|+++ |-.|+..|- +|. +..+ ..+...++..++.+
T Consensus 3 ~~~i~I~GPTAsGK---T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGK---TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCH---HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 45777777777766 3455566655 678888884 332 2221 12233478888999
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEEc
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGES 120 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~S 120 (318)
++.+.++.+..+ .+-.+++|-|
T Consensus 80 ~a~~~i~~i~~r----gk~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILAR----GKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhC----CCCcEEEccH
Confidence 999999988552 3445667644
No 289
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=60.45 E-value=50 Score=26.76 Aligned_cols=58 Identities=14% Similarity=0.018 Sum_probs=36.9
Q ss_pred EeecCCeeEEEEeecCCC--CCCceEEEEEccCCcccccchhHHHHHHHhc--CcEEEEecCCC
Q 021023 16 ILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNSTAIRLANE--GYACYGIDYQG 75 (318)
Q Consensus 16 ~~~~~g~~l~~~~~~p~~--~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G 75 (318)
|.+..+-..||...+|.- +..+++=+|+||.|.... . ..+.+++.++ +..|+..|.-+
T Consensus 188 f~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGT-i-tgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 188 FHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGT-I-TGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred hcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCce-e-echhHHHHHhCCCCEEEEeCCCc
Confidence 445555667887776651 123444578888776554 3 5677777665 57888888654
No 290
>PRK14974 cell division protein FtsY; Provisional
Probab=59.63 E-value=82 Score=25.80 Aligned_cols=66 Identities=20% Similarity=0.250 Sum_probs=40.9
Q ss_pred hcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC--CCcCEE
Q 021023 63 NEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP--DYFDGA 140 (318)
Q Consensus 63 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~ 140 (318)
..|+.++.+|-+|... +-..+.+.+..+.+.+ ....++++.-+.-|.-+...+..+. -.+.++
T Consensus 220 ~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~------~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~gi 284 (336)
T PRK14974 220 ARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVT------KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGV 284 (336)
T ss_pred hCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhh------CCceEEEeeccccchhHHHHHHHHHhcCCCCEE
Confidence 4578899999887643 2334456666666555 4556677777766666665554432 246777
Q ss_pred EEe
Q 021023 141 VLV 143 (318)
Q Consensus 141 vl~ 143 (318)
|+.
T Consensus 285 IlT 287 (336)
T PRK14974 285 ILT 287 (336)
T ss_pred EEe
Confidence 765
No 291
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.42 E-value=17 Score=27.40 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=21.0
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
+...-.+.|.|.|+.++..++...+
T Consensus 24 g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 24 GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 4556689999999999999998764
No 292
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=59.09 E-value=29 Score=26.38 Aligned_cols=60 Identities=8% Similarity=-0.007 Sum_probs=36.4
Q ss_pred cEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE--EEEEchhH-HHHHHHHh
Q 021023 66 YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY--LLGESMGG-AMVLLLHR 131 (318)
Q Consensus 66 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~--l~G~S~Gg-~~a~~~a~ 131 (318)
=-|+.+|-+|...+....- ..+......+...+...+. ...+++ ++|++++| .++.-+.+
T Consensus 66 pIv~lVD~~sQa~grreEl--lGi~~alAhla~a~a~AR~----~GHpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRREEL--LGINQALAHLAKAYALARL----AGHPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred CEEEEEeCCccccchHHHH--hhHHHHHHHHHHHHHHHHH----cCCCeEEEEecccccHHHHHHHHHh
Confidence 4678889998776653322 2455555555555555432 455665 89999965 55555544
No 293
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=58.93 E-value=73 Score=23.71 Aligned_cols=33 Identities=18% Similarity=0.118 Sum_probs=24.9
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
+..+.|.+.... +.++..|++.|++|++.|+.-
T Consensus 16 ~~~vtGg~sGIG---rAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 16 VAAVTGGSSGIG---RAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred eeEEecCCchHH---HHHHHHHHhcCcEEEEeecch
Confidence 555666554444 788899999999999998753
No 294
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=58.91 E-value=1.1e+02 Score=25.75 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=40.5
Q ss_pred hHHHHHHHhcCcEEEEecCCCC--cCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEE-------------
Q 021023 55 NSTAIRLANEGYACYGIDYQGH--GKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE------------- 119 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~------------- 119 (318)
..-...|.+.|+.|+-+..--+ |.... +...++++.+..+...+..- ......++.+.|-
T Consensus 132 ~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~---~~~~~~~vlit~g~t~E~iD~VR~it 206 (390)
T TIGR00521 132 QENIKRLKDDGYIFIEPDSGLLACGDEGK--GRLAEPETIVKAAEREFSPK---EDLEGKRVLITAGPTREPIDPVRFIS 206 (390)
T ss_pred HHHHHHHHHCCcEEECCCCcccccccccC--CCCCCHHHHHHHHHHHHhhc---cccCCceEEEecCCccCCCCceeeec
Confidence 4555677777887766653222 33221 11246666666666655331 1125667777776
Q ss_pred -----chhHHHHHHHHhh
Q 021023 120 -----SMGGAMVLLLHRK 132 (318)
Q Consensus 120 -----S~Gg~~a~~~a~~ 132 (318)
.+|..+|..++.+
T Consensus 207 N~SSG~~g~~~a~~~~~~ 224 (390)
T TIGR00521 207 NLSSGKMGLALAEAAYKR 224 (390)
T ss_pred CCCcchHHHHHHHHHHHC
Confidence 3666777666654
No 295
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=58.36 E-value=73 Score=23.69 Aligned_cols=43 Identities=19% Similarity=0.109 Sum_probs=28.4
Q ss_pred CceEEEEEccCCcccccc--hhHHHHHHHhcCcEEEEecCCCCcC
Q 021023 36 PKALIFICHGYAMECSIG--MNSTAIRLANEGYACYGIDYQGHGK 78 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~ 78 (318)
.+++++++||.....-.. -..+...|.+.|..+...-+++-|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 467899999976543322 1567778888887776666665443
No 296
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=57.37 E-value=46 Score=26.49 Aligned_cols=74 Identities=19% Similarity=0.219 Sum_probs=42.3
Q ss_pred EEEEccCCcccccchhHHHHHHHhc-CcEEEEecCC----CC--cCCC----------------CCCCCCCChHhHHHHH
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQ----GH--GKSA----------------GLSGYIDNFDDLVDDC 96 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~----G~--G~s~----------------~~~~~~~~~~~~~~d~ 96 (318)
||++-|-.+++. ..++..|++. +..++..|-. |. |... ......++..++..+.
T Consensus 1 vi~i~G~t~~GK---s~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~~a 77 (287)
T TIGR00174 1 VIFIMGPTAVGK---SQLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQTLA 77 (287)
T ss_pred CEEEECCCCCCH---HHHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHHHH
Confidence 356666666665 4566666655 6677777652 21 1111 1112235677888888
Q ss_pred HHHHHHHHhhhhccCceEEEEEEc
Q 021023 97 FNHFTSICEKEENKEKMRYLLGES 120 (318)
Q Consensus 97 ~~~l~~l~~~~~~~~~~~~l~G~S 120 (318)
.+.++.+.+ .....+++|-|
T Consensus 78 ~~~i~~~~~----~g~~pi~vGGT 97 (287)
T TIGR00174 78 LNAIADITA----RGKIPLLVGGT 97 (287)
T ss_pred HHHHHHHHh----CCCCEEEEcCc
Confidence 888888744 23445666644
No 297
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=57.27 E-value=13 Score=28.12 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=25.6
Q ss_pred eEEEEEccCC-cccccchhHHHHHHHhcCcEEEEec
Q 021023 38 ALIFICHGYA-MECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 38 ~~iv~~hG~~-~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
..||++|... .+.. .+..+++.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~-aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAE-ALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHH-HHHHHHHHHHHCCCEEEEhH
Confidence 4689999753 3334 34889999999999998875
No 298
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=57.25 E-value=14 Score=29.27 Aligned_cols=22 Identities=23% Similarity=0.261 Sum_probs=18.6
Q ss_pred CceEEEEEEchhHHHHHHHHhh
Q 021023 111 EKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
..+..++|||+|=+.|+.++..
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC
Confidence 7788999999999988877643
No 299
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=57.25 E-value=37 Score=29.04 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=53.8
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEc
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGES 120 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S 120 (318)
+|--|+|.+....-..-+++-..+||.|+.+|-.|.-. +-..+...+..+++.- ..+.|+.+|.-
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~---------~~~~lm~~l~k~~~~~------~pd~i~~vgea 506 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH---------NNAPLMTSLAKLIKVN------KPDLILFVGEA 506 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc---------CChhHHHHHHHHHhcC------CCceEEEehhh
Confidence 34446665544332333445556699999999887532 2333455566666554 67789999988
Q ss_pred hhHHHHHHHHhh---------CCCCcCEEEEe
Q 021023 121 MGGAMVLLLHRK---------KPDYFDGAVLV 143 (318)
Q Consensus 121 ~Gg~~a~~~a~~---------~p~~v~~~vl~ 143 (318)
+=|.=++.-+.. .|..++++++.
T Consensus 507 lvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 507 LVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred hhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 877666554422 34567777765
No 300
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=57.09 E-value=22 Score=28.00 Aligned_cols=82 Identities=15% Similarity=0.067 Sum_probs=45.3
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCc-------EEEEecCCCCcCCCCCCCCCCChHhHH--------HHHHHHHHHHH
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGY-------ACYGIDYQGHGKSAGLSGYIDNFDDLV--------DDCFNHFTSIC 104 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~~--------~d~~~~l~~l~ 104 (318)
-|++.|.|...-..-+.+...+.+.|. +++.+|..|-=..+..... .....++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAV- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhc-
Confidence 345556664443232556666666677 8999999985333222100 0111222 2455555544
Q ss_pred hhhhccCceEEEEEEch-hHHHHHHHH
Q 021023 105 EKEENKEKMRYLLGESM-GGAMVLLLH 130 (318)
Q Consensus 105 ~~~~~~~~~~~l~G~S~-Gg~~a~~~a 130 (318)
++-+++|-|- ||.+.-.+.
T Consensus 105 -------~ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 105 -------KPTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred -------CCCEEEEeCCCCCCCCHHHH
Confidence 6778999994 776655443
No 301
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=56.62 E-value=26 Score=25.19 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=19.5
Q ss_pred cCceEEEEEEchhHHHHHHHHhhC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
+...-.++|-|.|+.+|..++...
T Consensus 26 ~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 26 GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCCeeEEEEECHHHHHHHHHHcCC
Confidence 345568999999999999998653
No 302
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=56.52 E-value=16 Score=28.56 Aligned_cols=70 Identities=9% Similarity=0.130 Sum_probs=45.2
Q ss_pred CceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHH-HHHHHHHHHhhhhccCce
Q 021023 36 PKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDD-CFNHFTSICEKEENKEKM 113 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~ 113 (318)
..|+||++.|+.+++..- ...+...|..+|++|.++.-| +-++...+ +-.+-..+ ...+.
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P-------------t~eE~~~p~lWRfw~~l-----P~~G~ 115 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP-------------SAEELDHDFLWRIHKAL-----PERGE 115 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcCchHHHHHHhC-----CCCCe
Confidence 458999999998776532 367778888889999999665 22222222 33444444 13567
Q ss_pred EEEEEEchhH
Q 021023 114 RYLLGESMGG 123 (318)
Q Consensus 114 ~~l~G~S~Gg 123 (318)
+.|+=-|+=+
T Consensus 116 i~IF~RSWY~ 125 (264)
T TIGR03709 116 IGIFNRSHYE 125 (264)
T ss_pred EEEEcCcccc
Confidence 7777777633
No 303
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.89 E-value=0.57 Score=36.94 Aligned_cols=108 Identities=18% Similarity=0.016 Sum_probs=58.7
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEE
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l 116 (318)
...++..||...+...........+...++.++..|+++++.+.+..... .+..-..++...+.... ......++++
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~--~~~~~~~~~~ 164 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA-GLSLGGPSAGALLAWGP--TRLDASRIVV 164 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEE-EEEeeccchHHHhhcch--hHHHhhcccc
Confidence 34467788875444433123334444557899999999999887443210 11111111222222210 0113568999
Q ss_pred EEEchhHHHHHHHHhh----CCCCcCEEEEeCCCc
Q 021023 117 LGESMGGAMVLLLHRK----KPDYFDGAVLVAPMC 147 (318)
Q Consensus 117 ~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 147 (318)
+|.|+||..++..... .++.+..++.-++..
T Consensus 165 ~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (299)
T COG1073 165 WGESLGGALALLLLGANPELARELIDYLITPGGFA 199 (299)
T ss_pred eeeccCceeeccccccchHHHHhhhhhhccCCCCC
Confidence 9999999999886654 234444444444433
No 304
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=55.43 E-value=1.1e+02 Score=25.75 Aligned_cols=58 Identities=14% Similarity=0.225 Sum_probs=32.8
Q ss_pred hHHHHHHHhcCcEEEEecCCCC---cCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEE
Q 021023 55 NSTAIRLANEGYACYGIDYQGH---GKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~ 119 (318)
..-...|.+.|+.|+-+. +|+ |.... +...+.++.+..+...+.. ......++.+.|-
T Consensus 136 ~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~--gr~~~~~~I~~~~~~~~~~----~~l~gk~vlITgG 196 (399)
T PRK05579 136 QRNLATLRSRGVEIIGPA-SGRLACGDVGP--GRMAEPEEIVAAAERALSP----KDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHHCCCEEECCC-CccccCCCcCC--CCCCCHHHHHHHHHHHhhh----cccCCCEEEEeCC
Confidence 455567878899888665 343 22221 1124666666666555532 1225567777776
No 305
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=54.90 E-value=24 Score=18.80 Aligned_cols=35 Identities=17% Similarity=0.337 Sum_probs=24.6
Q ss_pred hcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 63 NEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 63 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
..+|.+.++|+||.-... .+.++..+.+..++...
T Consensus 11 ~~~y~~~~pdlpg~~t~G------~t~eea~~~~~eal~~~ 45 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQG------DTLEEALENAKEALELW 45 (48)
T ss_dssp SSSEEEEETTCCTCEEEE------SSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhcC------CCHHHHHHHHHHHHHHH
Confidence 347999999999874221 37777777777776543
No 306
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=54.89 E-value=10 Score=27.81 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=23.9
Q ss_pred eEEEEEccC---CcccccchhHHHHHHHhcCcEEEEec
Q 021023 38 ALIFICHGY---AMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 38 ~~iv~~hG~---~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
..||++|.. ..+.... ..+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l-~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKAL-PTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHH-HHHHHHHHHCCCEEEEHH
Confidence 359999942 2223333 788889989999998874
No 307
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=54.32 E-value=17 Score=27.64 Aligned_cols=71 Identities=8% Similarity=0.014 Sum_probs=46.6
Q ss_pred CceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHH-HHHHHHHHHhhhhccCce
Q 021023 36 PKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDD-CFNHFTSICEKEENKEKM 113 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~ 113 (318)
..|+||++.|+.+++..- ...+...|..+|+.|.++.-| +-++...+ +-.+-..+ ...+.
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p-------------t~eE~~~p~lwRfw~~l-----P~~G~ 90 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP-------------SDRERTQWYFQRYVQHL-----PAAGE 90 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcChHHHHHHHhC-----CCCCe
Confidence 368999999998776532 367777887889999998765 33333332 33444444 14567
Q ss_pred EEEEEEchhHH
Q 021023 114 RYLLGESMGGA 124 (318)
Q Consensus 114 ~~l~G~S~Gg~ 124 (318)
+.++=-|+=+-
T Consensus 91 i~IF~rSwY~~ 101 (230)
T TIGR03707 91 IVLFDRSWYNR 101 (230)
T ss_pred EEEEeCchhhh
Confidence 88887776444
No 308
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=53.92 E-value=41 Score=22.86 Aligned_cols=16 Identities=19% Similarity=0.277 Sum_probs=11.7
Q ss_pred HHHHHHHhcCcEEEEe
Q 021023 56 STAIRLANEGYACYGI 71 (318)
Q Consensus 56 ~~~~~l~~~g~~v~~~ 71 (318)
.....|.+.|++|+++
T Consensus 99 r~~~~L~~~GwrvlvV 114 (150)
T COG3727 99 RDIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHHcCCeEEEE
Confidence 4456777789998765
No 309
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=53.87 E-value=75 Score=27.06 Aligned_cols=68 Identities=13% Similarity=0.169 Sum_probs=42.7
Q ss_pred HHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC--CcC
Q 021023 61 LANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YFD 138 (318)
Q Consensus 61 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~ 138 (318)
+...+|.++.+|-+|.-. .-+.+.+.+..+.+.. ....++++--++-|.-+...+..+.+ .+.
T Consensus 178 ~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~------~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~ 242 (429)
T TIGR01425 178 FKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI------QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVG 242 (429)
T ss_pred HHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc------CCcEEEEEeccccChhHHHHHHHHHhccCCc
Confidence 334579999999988522 2334555666655544 55667777777777666666655432 367
Q ss_pred EEEEe
Q 021023 139 GAVLV 143 (318)
Q Consensus 139 ~~vl~ 143 (318)
++|+.
T Consensus 243 g~IlT 247 (429)
T TIGR01425 243 SVIIT 247 (429)
T ss_pred EEEEE
Confidence 77765
No 310
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=53.38 E-value=16 Score=30.81 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=21.8
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPDY 136 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 136 (318)
+..+-++.|-|.|+.+|..++...++.
T Consensus 99 gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 99 NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 455668999999999999999865543
No 311
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=51.53 E-value=15 Score=28.73 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=26.5
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEec
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
..||++|....+.... ..+++.|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL-~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGL-EEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHH-HHHHHHHHHCCCEEEeHH
Confidence 4588999766555544 889999999999998875
No 312
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.09 E-value=1.1e+02 Score=25.93 Aligned_cols=69 Identities=19% Similarity=0.209 Sum_probs=46.9
Q ss_pred HHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCC--cC
Q 021023 61 LANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY--FD 138 (318)
Q Consensus 61 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~ 138 (318)
+...+|.|+.+|-.|.- .--+++.+++.++-+.+ .+..+.+|--++=|.-|...|..+.+. +.
T Consensus 178 ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~------~P~E~llVvDam~GQdA~~~A~aF~e~l~it 242 (451)
T COG0541 178 AKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVI------NPDETLLVVDAMIGQDAVNTAKAFNEALGIT 242 (451)
T ss_pred HHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhc------CCCeEEEEEecccchHHHHHHHHHhhhcCCc
Confidence 33445677777765541 12344556666665555 788899999999999999998776543 67
Q ss_pred EEEEeC
Q 021023 139 GAVLVA 144 (318)
Q Consensus 139 ~~vl~~ 144 (318)
++|+.-
T Consensus 243 GvIlTK 248 (451)
T COG0541 243 GVILTK 248 (451)
T ss_pred eEEEEc
Confidence 888764
No 313
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=51.00 E-value=16 Score=29.46 Aligned_cols=19 Identities=37% Similarity=0.644 Sum_probs=16.7
Q ss_pred EEEEEchhHHHHHHHHhhC
Q 021023 115 YLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~ 133 (318)
.+.|.|.||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5899999999999998744
No 314
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=50.91 E-value=8.4 Score=29.27 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=27.3
Q ss_pred CceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCC
Q 021023 36 PKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~ 74 (318)
..|+||++.|+.+++..- ...+...|..+|+.|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 357999999999887632 255556666779999999876
No 315
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=50.57 E-value=12 Score=26.47 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=29.9
Q ss_pred EEecCCCCcCCC--CCCCCCCChHhHHHHHHHHHHHHHhhh--hccCceEEEEEEchhHH
Q 021023 69 YGIDYQGHGKSA--GLSGYIDNFDDLVDDCFNHFTSICEKE--ENKEKMRYLLGESMGGA 124 (318)
Q Consensus 69 ~~~d~~G~G~s~--~~~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~~~l~G~S~Gg~ 124 (318)
+.+-+-|||... ...-..++..+++.-+..+-+.+.... ...+++|.|+|-|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 344455788762 111112467777777755556664332 23567999999999887
No 316
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=50.56 E-value=73 Score=21.18 Aligned_cols=52 Identities=21% Similarity=0.129 Sum_probs=33.3
Q ss_pred EEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 41 FICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
|++||-.|++... +++.+++. |+.++.+|..-...+ ...+..+.+..+++..
T Consensus 1 ill~G~~G~GKT~---l~~~la~~l~~~~~~i~~~~~~~~--------~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGKTT---LARALAQYLGFPFIEIDGSELISS--------YAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSHHH---HHHHHHHHTTSEEEEEETTHHHTS--------STTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeH---HHHHHHhhcccccccccccccccc--------cccccccccccccccc
Confidence 6899998888743 55555544 788888887655422 2334455566666655
No 317
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=50.41 E-value=27 Score=25.13 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=26.4
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEe
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGI 71 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~ 71 (318)
...+.|+++-|-|.+...- -..++.|..+|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDg-l~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDG-LVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHH-HHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHH-HHHHHHHHHCCCeEEEE
Confidence 3456688888888777655 67889999999998883
No 318
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=50.20 E-value=1.1e+02 Score=24.92 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=20.4
Q ss_pred EEEccCCcccccchhHHHHHHHhcC--cEEEEec
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEG--YACYGID 72 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g--~~v~~~d 72 (318)
|+++|+|+-...- ..|++.+.... +.|++++
T Consensus 57 lL~YG~GSKr~lL-~~Fa~~~l~~~~~~~~vvvn 89 (326)
T PF04084_consen 57 LLFYGYGSKRKLL-NDFAEKYLSDWGDGPVVVVN 89 (326)
T ss_pred EEEEecChHHHHH-HHHHHHHhhccCCCcEEEEE
Confidence 6788888766644 77777665552 5666666
No 319
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=49.31 E-value=37 Score=20.20 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=18.9
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHh-cCcEEEEe
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLAN-EGYACYGI 71 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~ 71 (318)
.|.++++||...... ..++...++ +|..++.+
T Consensus 31 ~~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGA---DRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEe
Confidence 366889999763333 445555544 36665554
No 320
>COG3933 Transcriptional antiterminator [Transcription]
Probab=49.17 E-value=1.3e+02 Score=25.55 Aligned_cols=76 Identities=22% Similarity=0.181 Sum_probs=53.9
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 115 (318)
.-.+||+.||...-++ - ..++..|.+. =-+.++|+|-- .+..+..+.+.+.++.. +..+=+
T Consensus 108 ~v~vIiiAHG~sTASS-m-aevanrLL~~-~~~~aiDMPLd----------vsp~~vle~l~e~~k~~------~~~~Gl 168 (470)
T COG3933 108 RVKVIIIAHGYSTASS-M-AEVANRLLGE-EIFIAIDMPLD----------VSPSDVLEKLKEYLKER------DYRSGL 168 (470)
T ss_pred ceeEEEEecCcchHHH-H-HHHHHHHhhc-cceeeecCCCc----------CCHHHHHHHHHHHHHhc------CccCce
Confidence 3467999999876655 3 6788888777 46889999732 46777777777777766 556656
Q ss_pred EEEEchhHHHHHHHH
Q 021023 116 LLGESMGGAMVLLLH 130 (318)
Q Consensus 116 l~G~S~Gg~~a~~~a 130 (318)
++=..||......=.
T Consensus 169 llLVDMGSL~~f~~~ 183 (470)
T COG3933 169 LLLVDMGSLTSFGSI 183 (470)
T ss_pred EEEEecchHHHHHHH
Confidence 666789987766543
No 321
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=48.88 E-value=56 Score=25.32 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=24.9
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
++++-|..+.-. ..+++.|+++|+.|+..+...
T Consensus 11 ~vlItG~s~gIG---~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSGIG---LAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEEeCCc
Confidence 466777665444 678889999999999988654
No 322
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=48.17 E-value=17 Score=30.61 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=22.4
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCCCc
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPDYF 137 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 137 (318)
+..+-++.|.|.|+.+|..++...++.+
T Consensus 93 gllp~iI~GtSAGAivaalla~~t~~el 120 (407)
T cd07232 93 DLLPNVISGTSGGSLVAALLCTRTDEEL 120 (407)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 5566779999999999999998655444
No 323
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=48.07 E-value=36 Score=26.08 Aligned_cols=22 Identities=18% Similarity=0.057 Sum_probs=18.6
Q ss_pred eEEEEEEchhHHHHHHHHhhCC
Q 021023 113 MRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
.-.++|-|.|+.++..++...+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 3479999999999999998653
No 324
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.59 E-value=32 Score=26.89 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=19.2
Q ss_pred eEEEEEEchhHHHHHHHHhhCCC
Q 021023 113 MRYLLGESMGGAMVLLLHRKKPD 135 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~ 135 (318)
.-.++|.|.|+.++..++...+.
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 44799999999999999887543
No 325
>PRK00131 aroK shikimate kinase; Reviewed
Probab=47.12 E-value=26 Score=24.98 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=24.3
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecC
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (318)
.+.+|++.|.+++.. ..++..|++. |+.++..|.
T Consensus 3 ~~~~i~l~G~~GsGK---stla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 3 KGPNIVLIGFMGAGK---STIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCCeEEEEcCCCCCH---HHHHHHHHHHhCCCEEEChH
Confidence 345899999998888 4577777665 676666553
No 326
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=46.53 E-value=22 Score=28.32 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=17.1
Q ss_pred CCceEEEEEccCCcccccc
Q 021023 35 EPKALIFICHGYAMECSIG 53 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~ 53 (318)
..+|.++-+||+.|++..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCeEEEecCCCCCchhH
Confidence 6789999999999999866
No 327
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=46.30 E-value=21 Score=26.97 Aligned_cols=28 Identities=21% Similarity=0.367 Sum_probs=21.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
=+|+.|-|-+.. +..|+++||.|+.+|+
T Consensus 40 rvLvPgCG~g~D------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 40 RVLVPGCGKGYD------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEETTTTTSCH------HHHHHHTTEEEEEEES
T ss_pred eEEEeCCCChHH------HHHHHHCCCeEEEEec
Confidence 467777665533 3578899999999997
No 328
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.25 E-value=1.1e+02 Score=22.08 Aligned_cols=85 Identities=20% Similarity=0.061 Sum_probs=48.7
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCC--CCCC--CCChH--hHHHHHHHHHHHHHhhhhcc
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAG--LSGY--IDNFD--DLVDDCFNHFTSICEKEENK 110 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~--~~~~--~~~~~--~~~~d~~~~l~~l~~~~~~~ 110 (318)
+..|-++.|..+.-. ..-++.|+++|..|+..|+|..+..+. ..+. .+... ..-+|+.+.+...+. .
T Consensus 8 kglvalvtggasglg---~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~----k 80 (260)
T KOG1199|consen 8 KGLVALVTGGASGLG---KATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKA----K 80 (260)
T ss_pred cCeeEEeecCccccc---HHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHh----h
Confidence 445666776554443 677899999999999999997765441 0000 00111 113456666655532 3
Q ss_pred CceEEEEEEchhHHHHHH
Q 021023 111 EKMRYLLGESMGGAMVLL 128 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~ 128 (318)
..++-+.=.|.|-..+..
T Consensus 81 fgrld~~vncagia~a~k 98 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAYAFK 98 (260)
T ss_pred ccceeeeeeccceeeeee
Confidence 455656666666554443
No 329
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=46.19 E-value=77 Score=23.74 Aligned_cols=58 Identities=22% Similarity=0.154 Sum_probs=34.2
Q ss_pred ceEEEEEccCCccccc--chhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHH
Q 021023 37 KALIFICHGYAMECSI--GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTS 102 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 102 (318)
+.+|+++||-....-. +.....+.|.+.|.+|-.-.++|.|.+ ...+..+++.++|+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 4579999998765432 236677788788887877777765543 234455666666543
No 330
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=46.03 E-value=1.1e+02 Score=22.17 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=35.7
Q ss_pred cCcEEEEecCCCCcCCCCCCCCCCChHhHHH---HHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC
Q 021023 64 EGYACYGIDYQGHGKSAGLSGYIDNFDDLVD---DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD 135 (318)
Q Consensus 64 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~---d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (318)
.|.+++.+..+ .+...........++..+. .+...+..|++ .+..+=+|+|||--|-. +.+-.-.|+
T Consensus 19 ~GV~~~~y~~~-~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~---~Gf~PDvI~~H~GWGe~-Lflkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPP-RGPTPGTHPYVRDFEAAVLRGQAVARAARQLRA---QGFVPDVIIAHPGWGET-LFLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCC-CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHH---cCCCCCEEEEcCCcchh-hhHHHhCCC
Confidence 57778887772 2222222222235555443 34444444433 37778889999865542 333344675
No 331
>PRK13690 hypothetical protein; Provisional
Probab=45.46 E-value=57 Score=23.52 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=28.5
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchh
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMG 122 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~G 122 (318)
+++++.+++..+++.+.+........+.++|-|-.
T Consensus 2 ~~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcSTS 36 (184)
T PRK13690 2 DLEEIKKQTRQILEELLEQANLKPGQIFVLGCSTS 36 (184)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEecchH
Confidence 45677788888888888777778889999999853
No 332
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=44.57 E-value=29 Score=28.94 Aligned_cols=26 Identities=15% Similarity=0.213 Sum_probs=21.8
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPD 135 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (318)
+..+-++.|.|.|+.+|..+|...++
T Consensus 109 gl~p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 109 GLLPRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred CCCCceEEEecHHHHHHHHHHcCCHH
Confidence 66777899999999999999985443
No 333
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=43.99 E-value=48 Score=25.63 Aligned_cols=20 Identities=25% Similarity=0.250 Sum_probs=17.2
Q ss_pred EEEEEchhHHHHHHHHhhCC
Q 021023 115 YLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p 134 (318)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999987644
No 334
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=43.12 E-value=96 Score=20.46 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=48.2
Q ss_pred EEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEE
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 117 (318)
.||.-|| . -+... ...++.+... -..+.++++.-. .+.++..+.+.+.++.+. ..+.++++
T Consensus 2 iii~sHG-~-~A~g~-~~~~~~i~G~~~~~i~~~~~~~~----------~~~~~~~~~l~~~i~~~~-----~~~~vlil 63 (116)
T PF03610_consen 2 IIIASHG-S-LAEGL-LESAEMILGEDQDNIEAVDLYPD----------ESIEDFEEKLEEAIEELD-----EGDGVLIL 63 (116)
T ss_dssp EEEEEET-T-HHHHH-HHHHHHHHTSTCSSEEEEEETTT----------SCHHHHHHHHHHHHHHCC-----TTSEEEEE
T ss_pred EEEEECc-H-HHHHH-HHHHHHHcCCCcccEEEEECcCC----------CCHHHHHHHHHHHHHhcc-----CCCcEEEE
Confidence 5788899 3 22224 6666777666 346777775421 378888888888887761 25677777
Q ss_pred EEchhHHHHHHHHh
Q 021023 118 GESMGGAMVLLLHR 131 (318)
Q Consensus 118 G~S~Gg~~a~~~a~ 131 (318)
.-=+||......+.
T Consensus 64 ~Dl~ggsp~n~a~~ 77 (116)
T PF03610_consen 64 TDLGGGSPFNEAAR 77 (116)
T ss_dssp ESSTTSHHHHHHHH
T ss_pred eeCCCCccchHHHH
Confidence 77777765555443
No 335
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=42.72 E-value=42 Score=25.72 Aligned_cols=38 Identities=21% Similarity=0.148 Sum_probs=22.6
Q ss_pred CCceEEEEEccCCcccccc----hhHHHHHHHhcCcEEEEec
Q 021023 35 EPKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGID 72 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d 72 (318)
..++.|++.+|.+.....| |..+++.|.+.++.|+.+=
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 3567888888887766555 4778888888887776543
No 336
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=42.25 E-value=58 Score=26.34 Aligned_cols=35 Identities=11% Similarity=-0.058 Sum_probs=24.2
Q ss_pred CceEEEEEccCCcccccc----hhHHHHHHHhcCcEEEE
Q 021023 36 PKALIFICHGYAMECSIG----MNSTAIRLANEGYACYG 70 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~ 70 (318)
.++.|+++||.......| |..+++.+.++|+.++.
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 345677788876544445 47778888777888764
No 337
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=42.18 E-value=21 Score=27.13 Aligned_cols=28 Identities=11% Similarity=0.211 Sum_probs=19.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
=||+.|-|-+.. +.+|+++||.|+.+|+
T Consensus 46 rvLvPgCGkg~D------~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSID------MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHH------HHHHHhCCCcEEEEec
Confidence 456666554322 3478899999999997
No 338
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=41.85 E-value=1.1e+02 Score=27.60 Aligned_cols=63 Identities=11% Similarity=0.033 Sum_probs=38.4
Q ss_pred CCceEEEEEccCCcccccc--hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 35 EPKALIFICHGYAMECSIG--MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
.-+.+++++||........ -..+...|...|..|-..-+|+-|..-.. .+...+-+..+++++
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~------~~~~~~~~~~~~~~~ 613 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR------PENRVKVLKEILDWF 613 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC------chhHHHHHHHHHHHH
Confidence 4456799999987654322 15677788778888877777764433211 233344455555555
No 339
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=41.77 E-value=34 Score=27.29 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=20.1
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
+..+-++.|.|.|+.+|..++....
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCc
Confidence 4455679999999999999987543
No 340
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=41.76 E-value=35 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.118 Sum_probs=22.6
Q ss_pred EEEccCCcccccc-hhHHHHHHHhcCcEEEEecCC
Q 021023 41 FICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 41 v~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+..+-||.+... -..++..|+.+|++|+.+|.=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 4445545444433 257888899999999999983
No 341
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=41.46 E-value=48 Score=25.85 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=44.2
Q ss_pred hHHHHHHHhcCcEEEEecCCCC-cCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHH----HH
Q 021023 55 NSTAIRLANEGYACYGIDYQGH-GKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVL----LL 129 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~----~~ 129 (318)
...++.+++.|-+++++.+--. |.+-+.... .++++.++.+.++.+..++ -...++++.| ||-++. .+
T Consensus 160 ~e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~~-~sl~~a~~~~~~i~~aa~~----v~~dii~l~h--GGPI~~p~D~~~ 232 (268)
T PF09370_consen 160 EEQARAMAEAGADIIVAHMGLTTGGSIGAKTA-LSLEEAAERIQEIFDAARA----VNPDIIVLCH--GGPIATPEDAQY 232 (268)
T ss_dssp HHHHHHHHHHT-SEEEEE-SS----------S---HHHHHHHHHHHHHHHHC----C-TT-EEEEE--CTTB-SHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCccCCCCcCcccc-CCHHHHHHHHHHHHHHHHH----hCCCeEEEEe--CCCCCCHHHHHH
Confidence 5567788888999999987432 333232222 4888888888888877643 2445666666 787652 33
Q ss_pred HhhCCCCcCEEEEeCCC
Q 021023 130 HRKKPDYFDGAVLVAPM 146 (318)
Q Consensus 130 a~~~p~~v~~~vl~~~~ 146 (318)
..++-+.+.+.+--++.
T Consensus 233 ~l~~t~~~~Gf~G~Ss~ 249 (268)
T PF09370_consen 233 VLRNTKGIHGFIGASSM 249 (268)
T ss_dssp HHHH-TTEEEEEESTTT
T ss_pred HHhcCCCCCEEecccch
Confidence 33333335666655443
No 342
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=41.41 E-value=34 Score=30.01 Aligned_cols=25 Identities=24% Similarity=0.045 Sum_probs=20.9
Q ss_pred ccCceEEEEEEchhHHHHHHHHhhC
Q 021023 109 NKEKMRYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (318)
.+.++-.++|||+|=+.|+..|.-.
T Consensus 262 ~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 262 FAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred cCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3788899999999999998887543
No 343
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=41.22 E-value=1e+02 Score=20.29 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=33.3
Q ss_pred eEEEeecCCeeEEEEeecCCCCCCceEEEEEccC-C-cccccc---hhHHHHHHHhcCcEEEEecC
Q 021023 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGY-A-MECSIG---MNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~-~-~~~~~~---~~~~~~~l~~~g~~v~~~d~ 73 (318)
...+.+.+|..+....+ ..+++||++-.. . ...... +..+...+.+.|..++.+..
T Consensus 7 ~f~l~~~~g~~~~l~~l-----~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 7 DFTLTDSDGKTVSLSDL-----KGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp CEEEETTTSEEEEGGGG-----TTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CcEeECCCCCEEEHHHH-----CCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 45566778888777665 336666666544 2 222111 24444556666899999885
No 344
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=41.05 E-value=1.2e+02 Score=25.30 Aligned_cols=75 Identities=15% Similarity=0.130 Sum_probs=47.8
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEE
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 117 (318)
-.|++.--++.+...- +.+++.|.+.|..|..+++.- . |...+++.+ ...+-+++
T Consensus 249 V~l~Y~smyg~T~~ma-~aiaegl~~~gv~v~~~~~~~--------------~----~~~eI~~~i------~~a~~~vv 303 (388)
T COG0426 249 VDLIYDSMYGNTEKMA-QAIAEGLMKEGVDVEVINLED--------------A----DPSEIVEEI------LDAKGLVV 303 (388)
T ss_pred EEEEEecccCCHHHHH-HHHHHHhhhcCCceEEEEccc--------------C----CHHHHHHHH------hhcceEEE
Confidence 3444444455554434 788888888899999998741 1 344444444 34567788
Q ss_pred EEc---------hhHHHHHHHHhhCCCCc
Q 021023 118 GES---------MGGAMVLLLHRKKPDYF 137 (318)
Q Consensus 118 G~S---------~Gg~~a~~~a~~~p~~v 137 (318)
|.+ ++..+....+...+.+.
T Consensus 304 GsPT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 304 GSPTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred ecCcccCCCCchHHHHHHHHHhccCcCce
Confidence 887 66667666777766644
No 345
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=40.86 E-value=84 Score=20.39 Aligned_cols=35 Identities=20% Similarity=0.411 Sum_probs=20.3
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEec
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
+.+++||++.+..... - ...+..|...||.|..++
T Consensus 63 ~~~~vvvyc~~g~~~~--s-~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 63 KEKLFVVYCDGPGCNG--A-TKAALKLAELGFPVKEMI 97 (110)
T ss_pred CCCeEEEEECCCCCch--H-HHHHHHHHHcCCeEEEec
Confidence 3456777776533211 1 445567777899865543
No 346
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=40.80 E-value=1.5e+02 Score=21.87 Aligned_cols=53 Identities=9% Similarity=0.004 Sum_probs=37.1
Q ss_pred CCeeEEEEeecCCCCCCc-eEEEEEccCCcccccchhHHHHHHHhcCcEE------EEecC
Q 021023 20 RRVKLFTCSWIPQNQEPK-ALIFICHGYAMECSIGMNSTAIRLANEGYAC------YGIDY 73 (318)
Q Consensus 20 ~g~~l~~~~~~p~~~~~~-~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v------~~~d~ 73 (318)
+|..+.|.-|...+-..+ ..|-++-|++..++.. .++...|.++|+.+ +.++.
T Consensus 43 ~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e-~P~l~~l~~~~~~~~~y~~t~~IN~ 102 (184)
T TIGR01626 43 SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXN-ASLIDAIKAAKFPPVKYQTTTIINA 102 (184)
T ss_pred cCCcccceeccHHHcCCCEEEEEEEecCCChhhcc-chHHHHHHHcCCCcccccceEEEEC
Confidence 456888888866543333 3344555777777767 89999998889888 77764
No 347
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=40.77 E-value=57 Score=26.62 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=26.5
Q ss_pred ceEEEEEcc-CCcccccc----hhHHHHHHHhcCcEEEEec
Q 021023 37 KALIFICHG-YAMECSIG----MNSTAIRLANEGYACYGID 72 (318)
Q Consensus 37 ~~~iv~~hG-~~~~~~~~----~~~~~~~l~~~g~~v~~~d 72 (318)
+|.|++.|| ..+....| |..+++.|.++|+.|+.+=
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578999999 44454445 4888889988887887753
No 348
>PHA02114 hypothetical protein
Probab=40.54 E-value=53 Score=20.85 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=27.0
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEec
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
-.+||+=--+..+...| -.++..|-+.||.|++-.
T Consensus 82 ~gtivldvn~amsr~pw-i~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAPW-IKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCcH-HHHHHHHHhcCceeeehh
Confidence 35677777777777778 788888888899998753
No 349
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=40.40 E-value=16 Score=28.57 Aligned_cols=17 Identities=18% Similarity=0.194 Sum_probs=13.7
Q ss_pred cCceEEEEEEchhHHHH
Q 021023 110 KEKMRYLLGESMGGAMV 126 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a 126 (318)
+...|+++|||+|..=.
T Consensus 233 ~i~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDY 249 (270)
T ss_pred CCCEEEEEeCCCchhhH
Confidence 56789999999997533
No 350
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=39.97 E-value=1e+02 Score=27.32 Aligned_cols=51 Identities=10% Similarity=0.197 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEE------chhHHHHHHHHhhCCCCcCEEEEeCCC
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGE------SMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (318)
.-++++-.++..+.. ..++++++|| |.|+.+++..-+..-.+ .+.+.++|.
T Consensus 321 vRaRvis~al~d~i~----e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 321 VRARVISTALSDIIK----ESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHHh----hcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 335666666666543 4689999999 78999998766654443 556666653
No 351
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=39.92 E-value=1.4e+02 Score=27.45 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=27.0
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecC
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (318)
.|..-|+++||.+|-+. ..++...|++ ||.|+-++-
T Consensus 323 RP~kKilLL~GppGlGK---TTLAHViAkqaGYsVvEINA 359 (877)
T KOG1969|consen 323 RPPKKILLLCGPPGLGK---TTLAHVIAKQAGYSVVEINA 359 (877)
T ss_pred CCccceEEeecCCCCCh---hHHHHHHHHhcCceEEEecc
Confidence 44456999999998887 3466666655 999999884
No 352
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=39.62 E-value=38 Score=29.10 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=31.8
Q ss_pred hcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEE-----EEEEchhHHHHHHHHhh
Q 021023 63 NEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY-----LLGESMGGAMVLLLHRK 132 (318)
Q Consensus 63 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~-----l~G~S~Gg~~a~~~a~~ 132 (318)
.+|.+++.+|--|.- .+ ..-.+..-|+.+ ..++|+ +.|.|-||.+|..+..+
T Consensus 414 g~G~rILSiDGGGtr----------G~--~~lqiL~kiekl------sgKpIheLFD~ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 414 GQGLRILSIDGGGTR----------GL--ATLQILKKIEKL------SGKPIHELFDLICGVSTGGILAIALGVK 470 (763)
T ss_pred CCceEEEEecCCCcc----------ch--hHHHHHHHHHHh------cCCcHHHHHHHHhccCchHHHHHHHHhc
Confidence 457888888853321 11 111233333334 455654 88999999999988764
No 353
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=39.17 E-value=1.2e+02 Score=21.08 Aligned_cols=57 Identities=11% Similarity=0.203 Sum_probs=32.3
Q ss_pred cceEEEeecCCeeEEEEeecCCCCCCceEEEEEccC-Ccc-ccc---chhHHHHHHHhcCcEEEEec
Q 021023 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGY-AME-CSI---GMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~-~~~-~~~---~~~~~~~~l~~~g~~v~~~d 72 (318)
.....+.+.+|..+....+ +.+++||++-+. .+. ... .+..+.+.+.+.|..++.+.
T Consensus 10 ~p~f~l~~~~G~~~~l~~~-----~gk~~ll~f~~~~~~p~C~~~~~~l~~~~~~~~~~~v~vi~Is 71 (154)
T PRK09437 10 APKFSLPDQDGEQVSLTDF-----QGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVVVLGIS 71 (154)
T ss_pred CCCcEeeCCCCCEEeHHHh-----CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 3344566677766555443 335666666432 221 110 12556667777789999996
No 354
>PLN02412 probable glutathione peroxidase
Probab=39.04 E-value=1.1e+02 Score=21.90 Aligned_cols=69 Identities=12% Similarity=0.114 Sum_probs=37.5
Q ss_pred CccccccCCccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCccccc-c---hhHHHHHHHhcCcEEEEecCCCC
Q 021023 1 MASEIDHNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI-G---MNSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~-~---~~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
|+.+.+... ......+.+|..+....+ ..+++||......+.... . +..+.+.+.++|+.|+.+....+
T Consensus 1 ~~~~~~~~~--pdf~l~d~~G~~v~l~~~-----~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~~ 73 (167)
T PLN02412 1 MAEESPKSI--YDFTVKDIGGNDVSLNQY-----KGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQF 73 (167)
T ss_pred CCcccCCCC--CceEEECCCCCEEeHHHh-----CCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEeccccc
Confidence 444444332 233455667866654443 336666655543322211 1 25566667777999999986543
No 355
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=38.79 E-value=65 Score=27.14 Aligned_cols=66 Identities=12% Similarity=0.203 Sum_probs=34.2
Q ss_pred cccEEEEEeCCCcccChHHHHHHHHHhcCCCceE--EEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 229 SIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTM--KLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
..|++|+.|.-|.+-+. ....+.+.+...+.-. +-+||.|+.....-. +..+.+.+.+++||...-
T Consensus 189 p~P~VIv~gGlDs~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp -EEEEEEE--TTS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHST
T ss_pred CCCEEEEeCCcchhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCC
Confidence 57999999999987532 2222223232234434 445888876432111 234568899999997653
No 356
>COG3621 Patatin [General function prediction only]
Probab=38.64 E-value=63 Score=26.15 Aligned_cols=55 Identities=20% Similarity=0.253 Sum_probs=32.0
Q ss_pred cEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceE-EEEEEchhHHHHHHHHhhCC
Q 021023 66 YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR-YLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 66 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p 134 (318)
|++..+|=-|.- .....++...|+.+ +..--.+.+ .+-|.|.||.+++.+|...+
T Consensus 9 ~rIlsldGGGvr------------G~i~lE~lr~ieqi--qGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 9 YRILSLDGGGVR------------GAILLEKLRIIEQI--QGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eeEEEecCCccc------------cHHHHHHHHHHHHH--hCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 777777743321 13345556666665 111011122 26799999999999987543
No 357
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=38.61 E-value=68 Score=27.31 Aligned_cols=41 Identities=20% Similarity=0.046 Sum_probs=25.5
Q ss_pred ccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCccccccc
Q 021023 230 IPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYG 275 (318)
Q Consensus 230 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 275 (318)
..|+++.|+.|+....... +.. +.....++|+|++|+.-+-
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~-~~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDS-SDSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-S-SSSEEEEEETT--TTGGGS
T ss_pred CeEEeeCCCCCCcccccCC----CCC-CCCcccEEECCCeeecccc
Confidence 4799999999998665522 222 2456678899999998773
No 358
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=38.59 E-value=2.5e+02 Score=23.95 Aligned_cols=65 Identities=18% Similarity=0.337 Sum_probs=46.3
Q ss_pred hHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC
Q 021023 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
...+..|.+.|..|++.-- .+.+++...+..++++. +.++-+++ .-||.++..+...+|
T Consensus 75 d~vaa~l~~~gi~v~a~~~-------------~~~~~y~~~~~~~l~~~------~~~p~~i~--DdGg~~~~~~~~~~~ 133 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWKG-------------ETLEEYWWCIEQALKFP------DGEPNMIL--DDGGDLTLLIHKKHP 133 (413)
T ss_pred HHHHHHHHhcCceEEEEcC-------------CCHHHHHHHHHHHHhcc------CCCCcEEE--ecchHHHHHHHhhhh
Confidence 7788899888888887642 36777777788888765 34565565 788988888877666
Q ss_pred CCcCEE
Q 021023 135 DYFDGA 140 (318)
Q Consensus 135 ~~v~~~ 140 (318)
+....+
T Consensus 134 ~~~~~~ 139 (413)
T cd00401 134 ELLPGI 139 (413)
T ss_pred hhhhcc
Confidence 543333
No 359
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=38.48 E-value=50 Score=22.04 Aligned_cols=15 Identities=20% Similarity=0.372 Sum_probs=11.4
Q ss_pred HHHHHHhcCcEEEEe
Q 021023 57 TAIRLANEGYACYGI 71 (318)
Q Consensus 57 ~~~~l~~~g~~v~~~ 71 (318)
....|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 445677889999876
No 360
>PRK10867 signal recognition particle protein; Provisional
Probab=38.32 E-value=2.6e+02 Score=24.05 Aligned_cols=69 Identities=16% Similarity=0.211 Sum_probs=39.1
Q ss_pred HHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC--Cc
Q 021023 60 RLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YF 137 (318)
Q Consensus 60 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v 137 (318)
.....+|.++.+|-+|.... -+...+.+..+.+.+ ....++++.-++-|.-+...+..+.+ .+
T Consensus 178 ~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v------~p~evllVlda~~gq~av~~a~~F~~~~~i 242 (433)
T PRK10867 178 EAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAV------NPDEILLVVDAMTGQDAVNTAKAFNEALGL 242 (433)
T ss_pred HHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhh------CCCeEEEEEecccHHHHHHHHHHHHhhCCC
Confidence 33345799999999987421 233344555555444 34455666656555555555544322 35
Q ss_pred CEEEEe
Q 021023 138 DGAVLV 143 (318)
Q Consensus 138 ~~~vl~ 143 (318)
.++|+.
T Consensus 243 ~giIlT 248 (433)
T PRK10867 243 TGVILT 248 (433)
T ss_pred CEEEEe
Confidence 677763
No 361
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=38.09 E-value=53 Score=26.54 Aligned_cols=23 Identities=17% Similarity=0.348 Sum_probs=19.4
Q ss_pred cCceEEEEEEchhHHHHHHHHhh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
+..+-++.|-|.|+.+|..++..
T Consensus 94 gl~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 94 QLLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCCCEEEEECHHHHHHHHHHcC
Confidence 55666799999999999998864
No 362
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.09 E-value=55 Score=24.70 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=24.9
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+..|++-|.....- - ..++..|++.||.|++--.+
T Consensus 6 ~~k~VlItgcs~GGI-G-~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGI-G-YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCcch-h-HHHHHHHHhCCeEEEEEccc
Confidence 344666766443332 3 67999999999999987654
No 363
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=37.53 E-value=2.2e+02 Score=22.90 Aligned_cols=98 Identities=11% Similarity=-0.043 Sum_probs=60.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChH---------------------hHHHHHHH
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFD---------------------DLVDDCFN 98 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~---------------------~~~~d~~~ 98 (318)
.|++-|.+.+...-+..+++.....|..++.+|.--.+..... ..++.+ ..+....+
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~--~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A 81 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSE--VDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEA 81 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCC--cccCHHHHhhhCCCcceeEeccCchhHHHHHHHHH
Confidence 5777888877776656677777777999999997543221110 011111 22333445
Q ss_pred HHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEE
Q 021023 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAV 141 (318)
Q Consensus 99 ~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v 141 (318)
+.+.+.+ ..+..-++-+|-|.|..++...+.+.|--+-+++
T Consensus 82 ~~r~l~s--R~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 82 FVRFLSS--RGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHHHhhc--ccchhheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 6666633 3345567888999999999888888775554443
No 364
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=37.22 E-value=46 Score=26.81 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=18.7
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..+.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999999888765
No 365
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=37.12 E-value=62 Score=24.92 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=27.9
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
-++++-|.++.-. ...++.|++.|+.|+....|
T Consensus 7 kv~lITGASSGiG---~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 7 KVALITGASSGIG---EATARALAEAGAKVVLAARR 39 (246)
T ss_pred cEEEEecCcchHH---HHHHHHHHHCCCeEEEEecc
Confidence 3888998877655 78999999999999999876
No 366
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=36.60 E-value=2.8e+02 Score=23.85 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=39.9
Q ss_pred HHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCC--CCc
Q 021023 60 RLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP--DYF 137 (318)
Q Consensus 60 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v 137 (318)
.+...+|.++.+|-+|.... -+...+.+..+.+.+ ....++++--++-|.-+...|..+- -.+
T Consensus 177 ~~~~~~~DvVIIDTaGr~~~---------d~~l~~eL~~i~~~~------~p~e~lLVvda~tgq~~~~~a~~f~~~v~i 241 (428)
T TIGR00959 177 YAKENGFDVVIVDTAGRLQI---------DEELMEELAAIKEIL------NPDEILLVVDAMTGQDAVNTAKTFNERLGL 241 (428)
T ss_pred HHHhcCCCEEEEeCCCcccc---------CHHHHHHHHHHHHhh------CCceEEEEEeccchHHHHHHHHHHHhhCCC
Confidence 33356799999999886421 123445555555544 4555666665665555555554432 246
Q ss_pred CEEEEe
Q 021023 138 DGAVLV 143 (318)
Q Consensus 138 ~~~vl~ 143 (318)
.++|+.
T Consensus 242 ~giIlT 247 (428)
T TIGR00959 242 TGVVLT 247 (428)
T ss_pred CEEEEe
Confidence 777765
No 367
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=36.53 E-value=1.3e+02 Score=23.83 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=23.5
Q ss_pred EEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCCCc
Q 021023 39 LIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHG 77 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G 77 (318)
++|++-|+++++... -..+...|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 378899999888644 255666677778999888865554
No 368
>PRK06523 short chain dehydrogenase; Provisional
Probab=36.49 E-value=1.1e+02 Score=23.58 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=24.6
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|+++|++|+..+..
T Consensus 11 ~vlItGas~gIG---~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKGIG---AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCchh---HHHHHHHHHCCCEEEEEeCC
Confidence 567777665544 67889999999999998764
No 369
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=36.49 E-value=78 Score=25.50 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=26.0
Q ss_pred CceEEEEEccCCcccccc----hhHHHHHHHhcCcEEEEe
Q 021023 36 PKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGI 71 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~ 71 (318)
+++.|++.||.......| |..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 467788888876665556 467788887778887754
No 370
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=36.49 E-value=1.8e+02 Score=21.73 Aligned_cols=39 Identities=5% Similarity=-0.125 Sum_probs=25.3
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
..+.|+++.-.......+...+.+.+.+.|+.+..+...
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~ 66 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLI 66 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEecc
Confidence 355677777666554444466777777778877766543
No 371
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=36.22 E-value=46 Score=24.11 Aligned_cols=34 Identities=21% Similarity=0.095 Sum_probs=25.1
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
+|.+.|..+++. ..++..|.+.|+.++..|.-.+
T Consensus 1 ii~itG~~gsGK---st~~~~l~~~g~~~i~~D~~~~ 34 (179)
T cd02022 1 IIGLTGGIGSGK---STVAKLLKELGIPVIDADKIAH 34 (179)
T ss_pred CEEEECCCCCCH---HHHHHHHHHCCCCEEecCHHHH
Confidence 467788888777 4577777778999988886544
No 372
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=36.06 E-value=40 Score=28.95 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=33.1
Q ss_pred ccEEEEEeCCCcccChHHHHHHHHHhcC----CCceEEEecCCcccccccCCccchHHHHHHHHHHHH
Q 021023 230 IPFIVLHGEEDKVTDKAVSVQLFKVASS----SDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLD 293 (318)
Q Consensus 230 ~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~ 293 (318)
.+++..+|-.|..+++-....-.+.++. .+..+..+-.+||++..++|+. ..+.+..|+.
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~----~~~~~~~~~~ 489 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPES----SLEMVNLWIN 489 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHH----HHHHHHHHHh
Confidence 4556666666666665444333333321 2233333345899999988865 4555555554
No 373
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=35.86 E-value=86 Score=19.80 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=17.8
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEE
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYAC 68 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v 68 (318)
+.+++||+++.... - ...+..|.+.||.+
T Consensus 60 ~~~~ivv~C~~G~r----s-~~aa~~L~~~G~~~ 88 (100)
T cd01523 60 DDQEVTVICAKEGS----S-QFVAELLAERGYDV 88 (100)
T ss_pred CCCeEEEEcCCCCc----H-HHHHHHHHHcCcee
Confidence 34566776664322 1 45667788889983
No 374
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=35.80 E-value=76 Score=24.52 Aligned_cols=20 Identities=15% Similarity=0.199 Sum_probs=17.7
Q ss_pred EEEEEchhHHHHHHHHhhCC
Q 021023 115 YLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p 134 (318)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999987653
No 375
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=35.27 E-value=1.5e+02 Score=22.68 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=23.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
.+++.|.++.-. ..+++.|+++|+.|+..+...
T Consensus 10 ~vlItGas~~iG---~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 10 TVWVTGAAQGIG---YAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEecch
Confidence 355666555444 568888989999999998643
No 376
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=35.20 E-value=1.7e+02 Score=20.92 Aligned_cols=58 Identities=9% Similarity=0.025 Sum_probs=36.9
Q ss_pred ccceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccc-----hhHHHHHHHhcCcEEEEec
Q 021023 10 KYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG-----MNSTAIRLANEGYACYGID 72 (318)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~-----~~~~~~~l~~~g~~v~~~d 72 (318)
..-.....+.+|..+....+ ..+++||+......+..+- ++...+.|.+.|..|+.+.
T Consensus 9 ~aPdF~Lp~~~g~~v~Lsd~-----~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS 71 (157)
T COG1225 9 KAPDFELPDQDGETVSLSDL-----RGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGIS 71 (157)
T ss_pred cCCCeEeecCCCCEEehHHh-----cCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 33445566677766555544 4457777777655444322 3667777878899998775
No 377
>PRK12828 short chain dehydrogenase; Provisional
Probab=35.17 E-value=60 Score=24.48 Aligned_cols=31 Identities=23% Similarity=0.065 Sum_probs=24.1
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|+++|+.|+.++.
T Consensus 9 ~vlItGatg~iG---~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLG---RATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHh---HHHHHHHHHCCCeEEEEeC
Confidence 466777666554 6788899899999999985
No 378
>PRK00889 adenylylsulfate kinase; Provisional
Probab=34.78 E-value=82 Score=22.60 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=24.7
Q ss_pred ceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecC
Q 021023 37 KALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~ 73 (318)
++.++.+.|.+++...- -..++..|...|..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 34588888988887643 24455566566777777753
No 379
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=34.71 E-value=1.7e+02 Score=22.63 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=34.5
Q ss_pred ceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
+...+++++|+++... ..+|=|+--+....+ - ..-+++|.+.||.|+.+-..
T Consensus 31 rrIVlVTSGGTtVPLE---------~ntVRFiDNFSaGtR-G-AaSAE~Fl~agYaVIFl~R~ 82 (302)
T KOG2728|consen 31 RRIVLVTSGGTTVPLE---------QNTVRFIDNFSAGTR-G-AASAEYFLAAGYAVIFLYRE 82 (302)
T ss_pred ceEEEEecCCeEeecc---------cCceEeeeccCcCCc-c-chhHHHHHhCCceEEEEeec
Confidence 4466777777666543 234778877765544 2 45667888899999987654
No 380
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=34.70 E-value=2e+02 Score=24.28 Aligned_cols=94 Identities=19% Similarity=0.225 Sum_probs=54.7
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCC-----CCCChHhHHHHHHHHHHHHHhhhhc
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-----YIDNFDDLVDDCFNHFTSICEKEEN 109 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~d~~~~l~~l~~~~~~ 109 (318)
.+...++++---.+-...- ...++.+...|+-|+-.|..++=....... ....++.+.+++......-
T Consensus 46 ~~~~~villSd~~G~~d~~-~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g------ 118 (456)
T COG3946 46 DPQGLVILLSDEAGIGDQE-RSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLG------ 118 (456)
T ss_pred CcceeeEEEEcccChhhhh-cchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhcc------
Confidence 4444555555433333333 466778888899999999887633221111 1233444444444333221
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCC
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPD 135 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (318)
....-+|.|---||.++...+++-|.
T Consensus 119 ~yr~PVl~g~g~Gg~~A~asaaqSp~ 144 (456)
T COG3946 119 VYRLPVLTGPGQGGTLAYASAAQSPD 144 (456)
T ss_pred CcccceEeecCCCcHHHHHHHhhChh
Confidence 23445688899999999998877653
No 381
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=34.67 E-value=42 Score=27.55 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=16.0
Q ss_pred EEEEEchhHHHHHHHHhh
Q 021023 115 YLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~ 132 (318)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 589999999999999864
No 382
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=34.43 E-value=81 Score=21.83 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=26.5
Q ss_pred EEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCCC
Q 021023 40 IFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSA 80 (318)
Q Consensus 40 iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 80 (318)
+|.+-|...+... ....++..|.++||+|.++=.-+||...
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 5666676655543 3478888998899999977666676554
No 383
>PRK13948 shikimate kinase; Provisional
Probab=34.42 E-value=59 Score=23.77 Aligned_cols=35 Identities=9% Similarity=-0.005 Sum_probs=26.3
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecC
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (318)
+.+..|++.|+.++.. ..+.+.|+++ |+.++-.|.
T Consensus 8 ~~~~~I~LiG~~GsGK---STvg~~La~~lg~~~iD~D~ 43 (182)
T PRK13948 8 RPVTWVALAGFMGTGK---SRIGWELSRALMLHFIDTDR 43 (182)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHHcCCCEEECCH
Confidence 3456888999998887 5577777754 888887774
No 384
>PRK08177 short chain dehydrogenase; Provisional
Probab=34.35 E-value=74 Score=23.91 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=24.1
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
.+++.|..+.-. ..+++.|+++|++|++.+...
T Consensus 3 ~vlItG~sg~iG---~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 3 TALIIGASRGLG---LGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred EEEEeCCCchHH---HHHHHHHHhCCCEEEEEeCCC
Confidence 355666655444 568889999999999998653
No 385
>PRK09072 short chain dehydrogenase; Provisional
Probab=34.09 E-value=65 Score=24.93 Aligned_cols=32 Identities=16% Similarity=0.053 Sum_probs=24.3
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|+++|+.|++.+..
T Consensus 7 ~vlItG~s~~iG---~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGGIG---QALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEECC
Confidence 466777665444 67888999999999999853
No 386
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.93 E-value=63 Score=25.01 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=15.6
Q ss_pred EEEEEchhHHHHHHHHh
Q 021023 115 YLLGESMGGAMVLLLHR 131 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (318)
.+.|-|.|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 387
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=33.82 E-value=41 Score=24.27 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=18.1
Q ss_pred cCceEEEEEEchhHHHHHHHHhh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
....-.+.|-|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 44556799999999999888765
No 388
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=33.76 E-value=1e+02 Score=22.22 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=21.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEec
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
-|++.|.|.+...- ..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~~A-~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVG-KAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHH-HHHHHHHHhCCCeEEEeC
Confidence 47777877665433 566667767788887774
No 389
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=33.71 E-value=1.1e+02 Score=28.20 Aligned_cols=22 Identities=27% Similarity=0.403 Sum_probs=18.2
Q ss_pred cCceEEEEEEchhHHHHHHHHh
Q 021023 110 KEKMRYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (318)
+..--++.|.|+||.++..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4455679999999999988886
No 390
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.64 E-value=80 Score=25.20 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=29.6
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCc
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG 77 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 77 (318)
.-++++-|.|+.-. +.++..|+++|..++.+|.-..|
T Consensus 38 g~~vLITGgg~GlG---r~ialefa~rg~~~vl~Din~~~ 74 (300)
T KOG1201|consen 38 GEIVLITGGGSGLG---RLIALEFAKRGAKLVLWDINKQG 74 (300)
T ss_pred CCEEEEeCCCchHH---HHHHHHHHHhCCeEEEEeccccc
Confidence 34788888877666 77899999999999999976544
No 391
>PLN02200 adenylate kinase family protein
Probab=33.59 E-value=1e+02 Score=23.66 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=23.6
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEe
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGI 71 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~ 71 (318)
...|.+|++.|.++++. ..++..|++. |+..+..
T Consensus 40 ~~~~~ii~I~G~PGSGK---sT~a~~La~~~g~~his~ 74 (234)
T PLN02200 40 EKTPFITFVLGGPGSGK---GTQCEKIVETFGFKHLSA 74 (234)
T ss_pred CCCCEEEEEECCCCCCH---HHHHHHHHHHhCCeEEEc
Confidence 34578999999999988 4466666655 5554444
No 392
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=33.27 E-value=44 Score=26.55 Aligned_cols=20 Identities=25% Similarity=0.240 Sum_probs=17.1
Q ss_pred EEEEEEchhHHHHHHHHhhC
Q 021023 114 RYLLGESMGGAMVLLLHRKK 133 (318)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~ 133 (318)
=.++|.|.||.+|+.++...
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 36999999999999998653
No 393
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=33.09 E-value=51 Score=21.90 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=18.7
Q ss_pred hhHHHHHHHhcCcEEEEecCC
Q 021023 54 MNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 54 ~~~~~~~l~~~g~~v~~~d~~ 74 (318)
+..+++.|+++||.|++.|.-
T Consensus 25 ~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred HHHHHHHHHHcCCcEEEEecc
Confidence 378999999999999999974
No 394
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=33.00 E-value=66 Score=25.44 Aligned_cols=31 Identities=29% Similarity=0.624 Sum_probs=24.1
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
+-|.|+|.-|.+ ...+.|+..||.|+..|+-
T Consensus 251 ~vPmi~fakG~g--------~~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 251 PVPMILFAKGSG--------GALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CCceEEEEcCcc--------hHHHHHHhcCCcEEeeccc
Confidence 458899988854 2456788899999999984
No 395
>COG0218 Predicted GTPase [General function prediction only]
Probab=32.98 E-value=33 Score=25.40 Aligned_cols=64 Identities=22% Similarity=0.356 Sum_probs=35.8
Q ss_pred hhcCcccccEEEEEeCCCcccChHHHH---HHHHHhcC-CCce--EEEecCCcccccccCCccchHHHHHHHHHHHHH
Q 021023 223 NRLDEVSIPFIVLHGEEDKVTDKAVSV---QLFKVASS-SDKT--MKLYEGMWHGLLYGEPEENTQIVFRDILNWLDE 294 (318)
Q Consensus 223 ~~~~~i~~P~lii~G~~D~~~~~~~~~---~~~~~~~~-~~~~--~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~ 294 (318)
+.+....+|++++.-..|.+-..+..+ ...+.+.. +... +..++-... ...+++.+.|.+|+..
T Consensus 129 ~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k--------~Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 129 EFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKK--------KGIDELKAKILEWLKE 198 (200)
T ss_pred HHHHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccc--------cCHHHHHHHHHHHhhc
Confidence 444556789999999999987655432 23333321 1111 333332211 2234578888888754
No 396
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=32.81 E-value=1.3e+02 Score=23.65 Aligned_cols=62 Identities=18% Similarity=0.103 Sum_probs=45.3
Q ss_pred ccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHHh
Q 021023 230 IPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERV 296 (318)
Q Consensus 230 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~~ 296 (318)
.|+.++=+. +--....+++.+.+ |+.+++.+-+..++++=+.+++...+..-.+.+||.++-
T Consensus 6 ~~IgvFDSG---VGGLsVlrei~~~L--P~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ 67 (269)
T COG0796 6 PPIGVFDSG---VGGLSVLREIRRQL--PDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG 67 (269)
T ss_pred CeEEEEECC---CCcHHHHHHHHHHC--CCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 456655322 22345667778888 788899998899999998888877777778888887664
No 397
>PRK05876 short chain dehydrogenase; Provisional
Probab=32.73 E-value=77 Score=24.89 Aligned_cols=32 Identities=19% Similarity=0.016 Sum_probs=24.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|.++.-. ..+++.|+++|++|+..+.+
T Consensus 8 ~vlVTGas~gIG---~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 8 GAVITGGASGIG---LATGTEFARRGARVVLGDVD 39 (275)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466777765544 67889999999999988754
No 398
>PRK07856 short chain dehydrogenase; Provisional
Probab=32.52 E-value=1.9e+02 Score=22.16 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=24.5
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
.+++-|.++.-. ..+++.|+++|+.|+..+...
T Consensus 8 ~~lItGas~gIG---~~la~~l~~~g~~v~~~~r~~ 40 (252)
T PRK07856 8 VVLVTGGTRGIG---AGIARAFLAAGATVVVCGRRA 40 (252)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCCh
Confidence 456666665544 678889999999999987643
No 399
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=32.44 E-value=38 Score=27.21 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=15.3
Q ss_pred EEEEEchhHHHHHHHHh
Q 021023 115 YLLGESMGGAMVLLLHR 131 (318)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (318)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999875
No 400
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B ....
Probab=32.40 E-value=1.5e+02 Score=20.06 Aligned_cols=32 Identities=25% Similarity=0.169 Sum_probs=23.0
Q ss_pred EEEEccCCcccccchhHHHHHHH-hcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLA-NEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~-~~g~~v~~~d~~ 74 (318)
||++-|.++++. ..+++.|+ ..|+.++..|.-
T Consensus 1 lii~~G~pgsGK---St~a~~l~~~~~~~~i~~D~~ 33 (143)
T PF13671_consen 1 LIILCGPPGSGK---STLAKRLAKRLGAVVISQDEI 33 (143)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHSTEEEEEHHHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHCCCEEEeHHHH
Confidence 577888888887 44677776 347778877763
No 401
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=32.32 E-value=2.9e+02 Score=22.75 Aligned_cols=77 Identities=18% Similarity=0.171 Sum_probs=48.7
Q ss_pred HHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCC--C
Q 021023 59 IRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--Y 136 (318)
Q Consensus 59 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~ 136 (318)
++-..+||.|+.+|--|.= .+-..+.+.+..+.+-+.......+..+.++--+.-|.-++.-|..+.+ .
T Consensus 215 ~~Akar~~DvvliDTAGRL---------hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~ 285 (340)
T COG0552 215 QAAKARGIDVVLIDTAGRL---------HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVG 285 (340)
T ss_pred HHHHHcCCCEEEEeCcccc---------cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcC
Confidence 4444568999999977642 3445556666666665522111123347777789889888888876543 3
Q ss_pred cCEEEEeC
Q 021023 137 FDGAVLVA 144 (318)
Q Consensus 137 v~~~vl~~ 144 (318)
+.|+|+.-
T Consensus 286 l~GiIlTK 293 (340)
T COG0552 286 LDGIILTK 293 (340)
T ss_pred CceEEEEe
Confidence 67887753
No 402
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=32.23 E-value=90 Score=21.99 Aligned_cols=19 Identities=32% Similarity=0.333 Sum_probs=16.6
Q ss_pred ceEEEEEEchhHHHHHHHH
Q 021023 112 KMRYLLGESMGGAMVLLLH 130 (318)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a 130 (318)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4567889999999999998
No 403
>PRK07326 short chain dehydrogenase; Provisional
Probab=32.18 E-value=74 Score=24.04 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=23.1
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|.++.-. ..+++.|+++|+.|++.+.
T Consensus 8 ~ilItGatg~iG---~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 8 VALITGGSKGIG---FAIAEALLAEGYKVAITAR 38 (237)
T ss_pred EEEEECCCCcHH---HHHHHHHHHCCCEEEEeeC
Confidence 566777655544 6788888889999999874
No 404
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=32.09 E-value=1.2e+02 Score=18.17 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=24.8
Q ss_pred hcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 63 NEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 63 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
+.+|.+..+|+||+-.-. .+.++..+.+..+++..
T Consensus 13 dg~y~~~~Pdlpgc~s~G------~T~eea~~n~~eai~l~ 47 (73)
T COG1598 13 DGGYVASVPDLPGCHSQG------ETLEEALQNAKEAIELH 47 (73)
T ss_pred CCCEEEEeCCCCCccccC------CCHHHHHHHHHHHHHHH
Confidence 457999999999974322 37777777777666654
No 405
>PTZ00256 glutathione peroxidase; Provisional
Probab=32.08 E-value=1.4e+02 Score=21.78 Aligned_cols=54 Identities=9% Similarity=0.031 Sum_probs=29.7
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcc---cccc---hhHHHHHHHhcCcEEEEecC
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAME---CSIG---MNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~---~~~~---~~~~~~~l~~~g~~v~~~d~ 73 (318)
....+.+|..+....+ ..+++||++. +... .... +..+.+.+.++|+.|+++..
T Consensus 23 f~l~d~~G~~vsLs~~-----~Gk~vvlv~n-~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~ 82 (183)
T PTZ00256 23 FEAIDIDGQLVQLSKF-----KGKKAIIVVN-VACKCGLTSDHYTQLVELYKQYKSQGLEILAFPC 82 (183)
T ss_pred eEeEcCCCCEEeHHHh-----CCCcEEEEEE-ECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEec
Confidence 3455667766655444 3456555554 3221 1111 24455556667899999864
No 406
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.87 E-value=95 Score=24.19 Aligned_cols=22 Identities=23% Similarity=0.384 Sum_probs=18.2
Q ss_pred eEEEEEEchhHHHHHHHHhhCC
Q 021023 113 MRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987654
No 407
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.79 E-value=17 Score=30.99 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=24.5
Q ss_pred cCceEEEEEEchhHHHHHHHHhhCCCCcCEE
Q 021023 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDGA 140 (318)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 140 (318)
+.-|-++.|-|+||.+|..++.+.-+.++.+
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~L 230 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQL 230 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHH
Confidence 5667789999999999999998765545544
No 408
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=31.50 E-value=79 Score=24.29 Aligned_cols=31 Identities=16% Similarity=0.004 Sum_probs=23.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|+++|++|+..+.
T Consensus 12 ~vlItGa~g~iG---~~ia~~l~~~G~~V~~~~r 42 (255)
T PRK07523 12 RALVTGSSQGIG---YALAEGLAQAGAEVILNGR 42 (255)
T ss_pred EEEEECCcchHH---HHHHHHHHHcCCEEEEEeC
Confidence 466777655544 6788889999999998764
No 409
>COG0237 CoaE Dephospho-CoA kinase [Coenzyme metabolism]
Probab=31.47 E-value=94 Score=23.22 Aligned_cols=35 Identities=23% Similarity=0.156 Sum_probs=27.6
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
.+|-+-|..+++. ..+++.|.+.||.|+..|-..|
T Consensus 3 ~iIglTG~igsGK---Stva~~~~~~G~~vidaD~v~r 37 (201)
T COG0237 3 LIIGLTGGIGSGK---STVAKILAELGFPVIDADDVAR 37 (201)
T ss_pred eEEEEecCCCCCH---HHHHHHHHHcCCeEEEccHHHH
Confidence 4778888888877 5688888888899998886544
No 410
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=31.46 E-value=1.3e+02 Score=20.81 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=25.2
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
|-+=|........-..+.++|.++||+|+=++..
T Consensus 19 IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~ 52 (140)
T COG1832 19 IAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNPK 52 (140)
T ss_pred EEEEecCCCCCccHHHHHHHHHHCCCEEEeeCcc
Confidence 4445666666555467889999999999998864
No 411
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=31.22 E-value=1.1e+02 Score=22.97 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=27.7
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
..+.+|.+-|..+++. ..++..|.+.|+.|+-.|.-+
T Consensus 3 ~~~~~igitG~igsGK---St~~~~l~~~g~~v~d~D~i~ 39 (208)
T PRK14731 3 SLPFLVGVTGGIGSGK---STVCRFLAEMGCELFEADRVA 39 (208)
T ss_pred CCCEEEEEECCCCCCH---HHHHHHHHHCCCeEEeccHHH
Confidence 3456788888888777 557788888899999888543
No 412
>PF00148 Oxidored_nitro: Nitrogenase component 1 type Oxidoreductase; InterPro: IPR000510 Enzymes belonging to this family include cofactor-requiring nitrogenases and protochlorophyllide reductase. The key enzymatic reactions in nitrogen fixation are catalysed by the nitrogenase complex, which has two components, the iron protein (component 2), and a component (component 1) which is either a molybdenum-iron, vanadium-iron or iron-iron protein. The enzyme (1.18.6.1 from EC) forms a hexamer of two alpha, two beta and two delta chains. Protochlorophyllide reductase (1.3.1.33 from EC) is involved in the light-dependent accumulation of chlorophyll, probably at the step of reduction of protochlorophyllide to chlorophyllide.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QH1_C 1QH8_A 1H1L_C 1QGU_A 3AEK_C 3AET_C 3AER_C 3AEU_A 3AES_C 3AEQ_C ....
Probab=31.11 E-value=2.8e+02 Score=23.32 Aligned_cols=60 Identities=20% Similarity=0.242 Sum_probs=39.1
Q ss_pred hHHHHHHHhc-CcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHh-hhhccCceEEEEEEc-hh
Q 021023 55 NSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICE-KEENKEKMRYLLGES-MG 122 (318)
Q Consensus 55 ~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~~~l~G~S-~G 122 (318)
..+++.+.++ |..|+.++.+|+..+ ....+..-+.++++.+.. ........+.|+|.+ ++
T Consensus 94 ~~v~~~~~~~~~~~vi~v~~~gf~~~--------~~~G~~~a~~~l~~~~~~~~~~~~~~~VNiiG~~~~~ 156 (398)
T PF00148_consen 94 EAVARELQEEYGIPVIPVHTPGFSGS--------YSQGYDAALRALAEQLVKPPEEKKPRSVNIIGGSPLG 156 (398)
T ss_dssp HHHHHHHHHHHSSEEEEEE--TTSSS--------HHHHHHHHHHHHHHHHTTGTTTTSSSEEEEEEESTBT
T ss_pred HHHHHHhhcccCCcEEEEECCCccCC--------ccchHHHHHHHHHhhcccccccCCCCceEEecCcCCC
Confidence 7888888765 679999999999332 334445556666776633 333355689999998 55
No 413
>PRK08339 short chain dehydrogenase; Provisional
Probab=30.96 E-value=86 Score=24.36 Aligned_cols=31 Identities=13% Similarity=0.003 Sum_probs=24.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
++++.|.++.-. ..+++.|+++|++|+..+.
T Consensus 10 ~~lItGas~gIG---~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTASSKGIG---FGVARVLARAGADVILLSR 40 (263)
T ss_pred EEEEeCCCCcHH---HHHHHHHHHCCCEEEEEeC
Confidence 566777665544 6788999999999998874
No 414
>PRK09135 pteridine reductase; Provisional
Probab=30.83 E-value=85 Score=23.88 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=24.4
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++-|..+.-. ..+++.|+++|+.|+.++.+
T Consensus 8 ~vlItGa~g~iG---~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 8 VALITGGARRIG---AAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 466777655444 67888999999999999864
No 415
>PRK06953 short chain dehydrogenase; Provisional
Probab=30.78 E-value=91 Score=23.34 Aligned_cols=30 Identities=7% Similarity=0.098 Sum_probs=23.1
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
+++.|..+.-. ..+++.|+++|+.|++.+.
T Consensus 4 vlvtG~sg~iG---~~la~~L~~~G~~v~~~~r 33 (222)
T PRK06953 4 VLIVGASRGIG---REFVRQYRADGWRVIATAR 33 (222)
T ss_pred EEEEcCCCchh---HHHHHHHHhCCCEEEEEEC
Confidence 56777665544 6788889889999999875
No 416
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=30.74 E-value=3.6e+02 Score=24.10 Aligned_cols=90 Identities=12% Similarity=0.042 Sum_probs=45.5
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCC---CCCCChHhHHHHHHHHHHHHHhhhhccCceE-
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS---GYIDNFDDLVDDCFNHFTSICEKEENKEKMR- 114 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~- 114 (318)
.+|++-|-++... - ..+++++.+.|+.+-++=.|..-..+-.. .....++..++-+..++..+........+++
T Consensus 169 ~LviIGGddS~~~-A-~~Lae~~~~~g~~i~VIGVPKTIDNDl~~t~id~s~GFdTA~k~~a~~I~ni~~Da~s~~~~~~ 246 (550)
T cd00765 169 ALVVIGGDDSNTN-A-ALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSELIGNVMRDARSTGKYWH 246 (550)
T ss_pred EEEEeCCchHHHH-H-HHHHHHHHhcCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 4565555444333 3 56777777778644444444433222111 1123566666666666666642222122232
Q ss_pred --EEEEEchhHHHHHHHHh
Q 021023 115 --YLLGESMGGAMVLLLHR 131 (318)
Q Consensus 115 --~l~G~S~Gg~~a~~~a~ 131 (318)
=++|.+. |++|+..+.
T Consensus 247 ~VEvMGR~a-G~LAl~~aL 264 (550)
T cd00765 247 FVKLMGRSA-SHIALECAL 264 (550)
T ss_pred EEEeCCCch-HHHHHHHHH
Confidence 2678776 456665554
No 417
>PRK03482 phosphoglycerate mutase; Provisional
Probab=30.51 E-value=2.3e+02 Score=21.19 Aligned_cols=39 Identities=18% Similarity=0.199 Sum_probs=24.6
Q ss_pred CChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHH
Q 021023 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLL 129 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~ 129 (318)
.++.++.+-+..+++.+... ...+++.+|+|+ +.+...+
T Consensus 120 Es~~~~~~Rv~~~l~~~~~~--~~~~~vliVsHg--~~i~~l~ 158 (215)
T PRK03482 120 ESMQELSDRMHAALESCLEL--PQGSRPLLVSHG--IALGCLV 158 (215)
T ss_pred ccHHHHHHHHHHHHHHHHHh--CCCCeEEEEeCc--HHHHHHH
Confidence 47777777777777776332 134578899984 4444433
No 418
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=30.50 E-value=74 Score=24.39 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=24.4
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|.++|+.|+..+..
T Consensus 6 ~vlItG~sg~iG---~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 6 VALVTGAASGIG---LEIALALAKEGAKVVIADLN 37 (258)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 466777665554 67888998999999998753
No 419
>PRK06924 short chain dehydrogenase; Provisional
Probab=30.01 E-value=87 Score=23.95 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=23.3
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++-|.++.-. ..+++.|+++|++|+..+..
T Consensus 3 ~vlItGasggiG---~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 3 YVIITGTSQGLG---EAIANQLLEKGTHVISISRT 34 (251)
T ss_pred EEEEecCCchHH---HHHHHHHHhcCCEEEEEeCC
Confidence 355566555444 67889999999999998754
No 420
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.89 E-value=1.1e+02 Score=24.55 Aligned_cols=38 Identities=21% Similarity=0.350 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhhhccCceEEEEEEc--hhHHHHHHHHhh
Q 021023 93 VDDCFNHFTSICEKEENKEKMRYLLGES--MGGAMVLLLHRK 132 (318)
Q Consensus 93 ~~d~~~~l~~l~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 132 (318)
..-+.+++++. .-....+++.++|.| ||--++..+..+
T Consensus 143 p~aii~lL~~~--~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDT--CGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHh--CCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 34556666665 334467899999997 899999888765
No 421
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=29.81 E-value=87 Score=24.10 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=23.0
Q ss_pred EEEEccCCcccccchhHH-HHHHHhc-CcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNST-AIRLANE-GYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~-~~~l~~~-g~~v~~~d~ 73 (318)
.|.+-|=|++....+..+ +..|.++ ||+|+++|-
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 456677777666554444 5666666 499999995
No 422
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=29.57 E-value=2.1e+02 Score=21.89 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=25.4
Q ss_pred hhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEE
Q 021023 54 MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (318)
Q Consensus 54 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~ 117 (318)
++.++..|.++||.|..+.+.-.. +...+.+-+...++.. +.+.+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~~~----------~~~s~~~~L~~~~~~~------~~~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDDPE----------NTQSFEDALARALKQH------GIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-TT------------SSHHHHHHHHHHHH----------EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCCcc----------ccccHHHHHHHHHHHc------CCCEEEEE
Confidence 478888999999999999875211 2223345565666655 56666655
No 423
>PTZ00056 glutathione peroxidase; Provisional
Probab=29.41 E-value=1.7e+02 Score=21.75 Aligned_cols=60 Identities=10% Similarity=-0.015 Sum_probs=31.6
Q ss_pred cceEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcc-cccc---hhHHHHHHHhcCcEEEEecCCC
Q 021023 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAME-CSIG---MNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~-~~~~---~~~~~~~l~~~g~~v~~~d~~G 75 (318)
.-+....+.+|..+....+ ..+++||..-+..+. .... +..+.+.+.++|+.|+++...-
T Consensus 19 ~pdf~l~d~~G~~vsL~~~-----kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~ 82 (199)
T PTZ00056 19 IYDYTVKTLEGTTVPMSSL-----KNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQ 82 (199)
T ss_pred CCceEEECCCCCEEeHHHh-----CCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchh
Confidence 3444556667766655544 335555554332211 1111 2344455556689999997543
No 424
>PRK08703 short chain dehydrogenase; Provisional
Probab=29.37 E-value=97 Score=23.50 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=22.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|+++|++|+..+.
T Consensus 8 ~vlItG~sggiG---~~la~~l~~~g~~V~~~~r 38 (239)
T PRK08703 8 TILVTGASQGLG---EQVAKAYAAAGATVILVAR 38 (239)
T ss_pred EEEEECCCCcHH---HHHHHHHHHcCCEEEEEeC
Confidence 456666554444 6788899999999999874
No 425
>PRK05717 oxidoreductase; Validated
Probab=29.35 E-value=92 Score=23.95 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=24.2
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|+++|+.|+..|.
T Consensus 12 ~vlItG~sg~IG---~~~a~~l~~~g~~v~~~~~ 42 (255)
T PRK05717 12 VALVTGAARGIG---LGIAAWLIAEGWQVVLADL 42 (255)
T ss_pred EEEEeCCcchHH---HHHHHHHHHcCCEEEEEcC
Confidence 566777765554 6788999999999999874
No 426
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=29.30 E-value=72 Score=21.25 Aligned_cols=31 Identities=29% Similarity=0.424 Sum_probs=23.5
Q ss_pred eEEEEE-EchhHHHHHHHHhhCCCCcCEEEEeC
Q 021023 113 MRYLLG-ESMGGAMVLLLHRKKPDYFDGAVLVA 144 (318)
Q Consensus 113 ~~~l~G-~S~Gg~~a~~~a~~~p~~v~~~vl~~ 144 (318)
++.|+| ..+.|.-.+.+...+|. +.-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 578999 88989888888888886 55444444
No 427
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=29.29 E-value=2.1e+02 Score=20.26 Aligned_cols=64 Identities=17% Similarity=0.155 Sum_probs=40.8
Q ss_pred hHHHHHHHhcCc-EEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEc-hhHHHHHHHHhh
Q 021023 55 NSTAIRLANEGY-ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGES-MGGAMVLLLHRK 132 (318)
Q Consensus 55 ~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S-~Gg~~a~~~a~~ 132 (318)
..+...++..|. .|+.++.+.... ++.+.+++-+.++++.. + ..++++|++ .|.-++..+|.+
T Consensus 48 ~~l~~~l~~~G~d~v~~~~~~~~~~--------~~~~~~a~~l~~~~~~~------~-~~lVl~~~t~~g~~la~~lA~~ 112 (164)
T PF01012_consen 48 EALRKALAKYGADKVYHIDDPALAE--------YDPEAYADALAELIKEE------G-PDLVLFGSTSFGRDLAPRLAAR 112 (164)
T ss_dssp HHHHHHHHSTTESEEEEEE-GGGTT--------C-HHHHHHHHHHHHHHH------T--SEEEEESSHHHHHHHHHHHHH
T ss_pred HHHhhhhhhcCCcEEEEecCccccc--------cCHHHHHHHHHHHHHhc------C-CCEEEEcCcCCCCcHHHHHHHH
Confidence 344455655776 688887654321 46777888888888775 3 457777776 466777777765
Q ss_pred C
Q 021023 133 K 133 (318)
Q Consensus 133 ~ 133 (318)
.
T Consensus 113 L 113 (164)
T PF01012_consen 113 L 113 (164)
T ss_dssp H
T ss_pred h
Confidence 3
No 428
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=29.15 E-value=63 Score=24.33 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=26.8
Q ss_pred EEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecC
Q 021023 39 LIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~ 73 (318)
++|++.|+++++..- -..+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 378899999887644 36788888888888887754
No 429
>PRK08265 short chain dehydrogenase; Provisional
Probab=29.12 E-value=94 Score=24.08 Aligned_cols=31 Identities=23% Similarity=0.148 Sum_probs=23.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|+++|++|+..+.
T Consensus 8 ~vlItGas~gIG---~~ia~~l~~~G~~V~~~~r 38 (261)
T PRK08265 8 VAIVTGGATLIG---AAVARALVAAGARVAIVDI 38 (261)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeC
Confidence 566777655444 6788999999999999875
No 430
>PRK06720 hypothetical protein; Provisional
Probab=29.11 E-value=98 Score=22.24 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=24.1
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
++++.|.++... ..++..|++.|++|+..|.
T Consensus 18 ~~lVTGa~~GIG---~aia~~l~~~G~~V~l~~r 48 (169)
T PRK06720 18 VAIVTGGGIGIG---RNTALLLAKQGAKVIVTDI 48 (169)
T ss_pred EEEEecCCChHH---HHHHHHHHHCCCEEEEEEC
Confidence 677888766544 5678889899999998874
No 431
>PRK08643 acetoin reductase; Validated
Probab=29.03 E-value=98 Score=23.78 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=22.4
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
++++-|..+.-. ..+++.|+++|++|+..+.
T Consensus 4 ~~lItGas~giG---~~la~~l~~~G~~v~~~~r 34 (256)
T PRK08643 4 VALVTGAGQGIG---FAIAKRLVEDGFKVAIVDY 34 (256)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeC
Confidence 345556554444 6788899999999999874
No 432
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=28.96 E-value=2.7e+02 Score=21.37 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=45.2
Q ss_pred HHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHH----HHHHHHh
Q 021023 56 STAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGA----MVLLLHR 131 (318)
Q Consensus 56 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~----~a~~~a~ 131 (318)
..++.|.+.+..|+..|+-|-...-.. .|.+..-++|....+..+++. ....-+-+.+|-++|+. -|+.+..
T Consensus 101 ~~~eklk~~~vdvvsLDfvgDn~vIk~---vy~l~ksv~dyl~~l~~L~e~-~irvvpHitiGL~~gki~~e~kaIdiL~ 176 (275)
T COG1856 101 SDLEKLKEELVDVVSLDFVGDNDVIKR---VYKLPKSVEDYLRSLLLLKEN-GIRVVPHITIGLDFGKIHGEFKAIDILV 176 (275)
T ss_pred HHHHHHHHhcCcEEEEeecCChHHHHH---HHcCCccHHHHHHHHHHHHHc-CceeceeEEEEeccCcccchHHHHHHHh
Confidence 445666666788999998764322100 012222255555556555331 11334556999999885 4566666
Q ss_pred hCCCCcCEEEEe
Q 021023 132 KKPDYFDGAVLV 143 (318)
Q Consensus 132 ~~p~~v~~~vl~ 143 (318)
.++ .+.+|+.
T Consensus 177 ~~~--~DalVl~ 186 (275)
T COG1856 177 NYE--PDALVLV 186 (275)
T ss_pred cCC--CCeEEEE
Confidence 554 3455443
No 433
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=28.91 E-value=57 Score=26.46 Aligned_cols=30 Identities=17% Similarity=0.053 Sum_probs=24.7
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEe
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGI 71 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~ 71 (318)
..||+-|.+|--..| ++..|.++||.|.+-
T Consensus 7 ~~VcVTGAsGfIgsw---ivk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 7 KKVCVTGASGFIGSW---IVKLLLSRGYTVRGT 36 (327)
T ss_pred cEEEEeCCchHHHHH---HHHHHHhCCCEEEEE
Confidence 478999998887755 788898999998764
No 434
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=28.83 E-value=96 Score=23.81 Aligned_cols=31 Identities=23% Similarity=0.028 Sum_probs=23.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|.++.-. ..++..|+++|++|+..+.
T Consensus 11 ~~lItGas~giG---~~ia~~L~~~G~~vvl~~r 41 (254)
T PRK08085 11 NILITGSAQGIG---FLLATGLAEYGAEIIINDI 41 (254)
T ss_pred EEEEECCCChHH---HHHHHHHHHcCCEEEEEcC
Confidence 567777665544 6788999999999998764
No 435
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=28.70 E-value=2.3e+02 Score=20.45 Aligned_cols=56 Identities=7% Similarity=0.038 Sum_probs=36.5
Q ss_pred eEEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccc-----hhHHHHHHHhcCcEEEEec
Q 021023 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG-----MNSTAIRLANEGYACYGID 72 (318)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~-----~~~~~~~l~~~g~~v~~~d 72 (318)
.....+.||..|...-+. ..+|+|+|+-...+...+- |+.-.+.|.+.|+.|+.+.
T Consensus 71 D~tL~dedg~sisLkkit----~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS 131 (211)
T KOG0855|consen 71 DFTLKDEDGKSISLKKIT----GNKPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLS 131 (211)
T ss_pred CcccccCCCCeeeeeeec----CCCcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeec
Confidence 345566778888887763 3458888887654443211 2666677877789998764
No 436
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=28.58 E-value=2.8e+02 Score=21.52 Aligned_cols=61 Identities=8% Similarity=0.125 Sum_probs=39.5
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEE---EEEchhHHHH-HHHHhhCCCCcCEEEEeCCCcccc
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYL---LGESMGGAMV-LLLHRKKPDYFDGAVLVAPMCKIA 150 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l---~G~S~Gg~~a-~~~a~~~p~~v~~~vl~~~~~~~~ 150 (318)
+..++-+++...|... ....+.-+.++ .|+++-|-.| ..++.-.|..|+++.+++|.-...
T Consensus 18 ~~~~Ls~QL~~wL~~~--~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHHv~ 82 (296)
T KOG3086|consen 18 SGPQLSAQLEGWLSQV--TLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHHVY 82 (296)
T ss_pred CHHHHHHHHHHHHhcc--CCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCcceee
Confidence 4556666777776655 22223334554 4888866554 455666788999999999987653
No 437
>PRK07814 short chain dehydrogenase; Provisional
Probab=28.48 E-value=98 Score=23.98 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=23.4
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|.++.-. ..+++.|.++|++|+..+.
T Consensus 12 ~vlItGasggIG---~~~a~~l~~~G~~Vi~~~r 42 (263)
T PRK07814 12 VAVVTGAGRGLG---AAIALAFAEAGADVLIAAR 42 (263)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeC
Confidence 466777655444 6788889999999998875
No 438
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=28.44 E-value=1.1e+02 Score=23.82 Aligned_cols=33 Identities=21% Similarity=0.149 Sum_probs=25.2
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEec
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
.|+++-|-|.+...- .-.+++|..+||.|.++-
T Consensus 62 ~V~VlcG~GNNGGDG-lv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDG-LVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhH-HHHHHHHHHCCCeEEEEE
Confidence 477777777776655 568889988999988776
No 439
>PRK04148 hypothetical protein; Provisional
Probab=28.41 E-value=1.2e+02 Score=20.97 Aligned_cols=22 Identities=18% Similarity=-0.008 Sum_probs=18.0
Q ss_pred CceEEEEEEchhHHHHHHHHhh
Q 021023 111 EKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
..++..+|-.+|..+|..++..
T Consensus 17 ~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 17 NKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CCEEEEEEecCCHHHHHHHHHC
Confidence 4679999999998888888754
No 440
>PRK06696 uridine kinase; Validated
Probab=28.37 E-value=1.1e+02 Score=23.19 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=25.4
Q ss_pred CCceEEEEEccCCcccccch-hHHHHHHHhcCcEEEEe
Q 021023 35 EPKALIFICHGYAMECSIGM-NSTAIRLANEGYACYGI 71 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~ 71 (318)
...|.||.+.|.++++...+ ..+++.|...|..++.+
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~ 56 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRA 56 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEe
Confidence 34688999999988877442 45555665557777763
No 441
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.20 E-value=1.1e+02 Score=23.81 Aligned_cols=21 Identities=24% Similarity=0.197 Sum_probs=17.7
Q ss_pred EEEEEEchhHHHHHHHHhhCC
Q 021023 114 RYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p 134 (318)
-.++|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 458899999999999987654
No 442
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=28.12 E-value=1e+02 Score=25.21 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=24.2
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCc
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG 77 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 77 (318)
-+|++||-+|++. ..+++.|+++ ..+-+-|.-.+|
T Consensus 178 RliLlhGPPGTGK---TSLCKaLaQk-LSIR~~~~y~~~ 212 (423)
T KOG0744|consen 178 RLILLHGPPGTGK---TSLCKALAQK-LSIRTNDRYYKG 212 (423)
T ss_pred eEEEEeCCCCCCh---hHHHHHHHHh-heeeecCccccc
Confidence 4899999999988 5678888765 555444444333
No 443
>COG3911 Predicted ATPase [General function prediction only]
Probab=28.07 E-value=1.1e+02 Score=21.79 Aligned_cols=30 Identities=23% Similarity=0.180 Sum_probs=23.4
Q ss_pred EEEEEccCCcccccchhHHHHHHHhcCcEEEEe
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGI 71 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~ 71 (318)
-++++.|.++... ..+...|+.+||.++--
T Consensus 10 ~~fIltGgpGaGK---TtLL~aLa~~Gfatvee 39 (183)
T COG3911 10 KRFILTGGPGAGK---TTLLAALARAGFATVEE 39 (183)
T ss_pred eEEEEeCCCCCcH---HHHHHHHHHcCceeecc
Confidence 4778888888877 56888999999877643
No 444
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.99 E-value=91 Score=23.57 Aligned_cols=31 Identities=13% Similarity=-0.084 Sum_probs=24.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|.++.-. ..+++.|.++|+.|+..+.
T Consensus 7 ~vlItGa~g~iG---~~~a~~l~~~G~~V~~~~r 37 (238)
T PRK05786 7 KVAIIGVSEGLG---YAVAYFALKEGAQVCINSR 37 (238)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 467888765555 5688888899999999875
No 445
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=27.92 E-value=1e+02 Score=23.42 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=24.5
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 4 ~vlItG~s~~iG---~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 4 IALVTGAKRGIG---SAIARELLNDGYRVIATYFS 35 (245)
T ss_pred EEEEeCCCchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 467777655544 67889999999999999854
No 446
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=27.87 E-value=2e+02 Score=21.89 Aligned_cols=65 Identities=11% Similarity=-0.006 Sum_probs=33.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcE---EEEecCCCCcCCCCCCC----CCCChHhHHHHHHHHHHHHH
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYA---CYGIDYQGHGKSAGLSG----YIDNFDDLVDDCFNHFTSIC 104 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~----~~~~~~~~~~d~~~~l~~l~ 104 (318)
=|++-|+.|....|-..+.+.+-..+-. +.+.=+-|-..|.-+.. ....++++.+.+.+++.+++
T Consensus 39 Dv~~RGysGynSRwALkvL~~ifp~~~s~~p~lvtVffGaNDs~l~~~~~~~~hvPl~Ey~dNlr~iv~~lk 110 (245)
T KOG3035|consen 39 DVLLRGYSGYNSRWALKVLPEIFPKGSSIQPVLVTVFFGANDSCLPEPSSLGQHVPLEEYKDNLRKIVSHLK 110 (245)
T ss_pred hhhhcccccchhHHHHHHhhhhccccccCCceEEEEEecCccccCCCCCCCCCccCHHHHHHHHHHHHHHhh
Confidence 3556666665555533344443333221 34444445444432211 12457888888888888873
No 447
>PRK13947 shikimate kinase; Provisional
Probab=27.70 E-value=78 Score=22.51 Aligned_cols=31 Identities=13% Similarity=0.259 Sum_probs=23.2
Q ss_pred EEEccCCcccccchhHHHHHHHhc-CcEEEEecCC
Q 021023 41 FICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQ 74 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~ 74 (318)
|++.|.+++.. ..++..|++. |+.++..|.-
T Consensus 4 I~l~G~~GsGK---st~a~~La~~lg~~~id~d~~ 35 (171)
T PRK13947 4 IVLIGFMGTGK---TTVGKRVATTLSFGFIDTDKE 35 (171)
T ss_pred EEEEcCCCCCH---HHHHHHHHHHhCCCEEECchh
Confidence 67889888887 5577777665 8888877753
No 448
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=27.65 E-value=72 Score=24.07 Aligned_cols=30 Identities=20% Similarity=0.203 Sum_probs=22.1
Q ss_pred EEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 42 ICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 42 ~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
++.|..+.-. ..+++.|.++|++|+..+.+
T Consensus 2 lItG~~g~iG---~~la~~l~~~G~~v~~~~r~ 31 (239)
T TIGR01830 2 LVTGASRGIG---RAIALKLAKEGAKVIITYRS 31 (239)
T ss_pred EEECCCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4566554433 67888999999999998764
No 449
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2
Probab=27.55 E-value=56 Score=27.88 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=32.8
Q ss_pred ecCCCCCCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC
Q 021023 29 WIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 29 ~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
++....+|+-.||=..+.+...+ + ..+.+.|.+.||.++..|.+--
T Consensus 179 ~~~~~~~P~IAIvDf~~~~~~~E-f-~~f~~~f~~~G~~~vI~d~~~L 224 (445)
T PF14403_consen 179 FGGRVEKPNIAIVDFLEYPTLSE-F-EVFQRLFEEHGYDCVICDPRDL 224 (445)
T ss_pred hcCcCCCCcEEEEecccCCccch-H-HHHHHHHHHcCCceEecChHHc
Confidence 33333345556777778666655 6 8899999999999999987643
No 450
>PRK06194 hypothetical protein; Provisional
Probab=27.52 E-value=90 Score=24.55 Aligned_cols=31 Identities=19% Similarity=-0.031 Sum_probs=23.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|+++|+.|++.|.
T Consensus 8 ~vlVtGasggIG---~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 8 VAVITGAASGFG---LAFARIGAALGMKLVLADV 38 (287)
T ss_pred EEEEeCCccHHH---HHHHHHHHHCCCEEEEEeC
Confidence 456777665544 6788899999999999885
No 451
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.52 E-value=1.1e+02 Score=23.06 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=24.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|+++|+.|+..+..
T Consensus 7 ~~lVtGas~~iG---~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 7 TVLITGAASGIG---LAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred EEEEcCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456667655444 67889999999999998765
No 452
>PRK07035 short chain dehydrogenase; Provisional
Probab=27.45 E-value=1e+02 Score=23.60 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=23.3
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++-|.++.-. ..+++.|+++|++|+..+.
T Consensus 10 ~vlItGas~gIG---~~l~~~l~~~G~~Vi~~~r 40 (252)
T PRK07035 10 IALVTGASRGIG---EAIAKLLAQQGAHVIVSSR 40 (252)
T ss_pred EEEEECCCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 456666655544 6788899999999999975
No 453
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=27.44 E-value=3e+02 Score=21.48 Aligned_cols=14 Identities=29% Similarity=0.235 Sum_probs=8.0
Q ss_pred cEEEEecCCCCcCC
Q 021023 66 YACYGIDYQGHGKS 79 (318)
Q Consensus 66 ~~v~~~d~~G~G~s 79 (318)
.+|+.+--||.|.|
T Consensus 53 nnvLL~G~rGtGKS 66 (249)
T PF05673_consen 53 NNVLLWGARGTGKS 66 (249)
T ss_pred cceEEecCCCCCHH
Confidence 35555666666654
No 454
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=27.40 E-value=1.2e+02 Score=24.22 Aligned_cols=41 Identities=10% Similarity=0.085 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhhhc--cCceEEEEEEchhHHHHHHHHhhCC
Q 021023 94 DDCFNHFTSICEKEEN--KEKMRYLLGESMGGAMVLLLHRKKP 134 (318)
Q Consensus 94 ~d~~~~l~~l~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (318)
..+...|++.+..... +.+++.++|-|-|=.+|.+.++.+.
T Consensus 22 ~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 22 ANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 3556666666544322 5778999999999999998887764
No 455
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=27.25 E-value=59 Score=22.05 Aligned_cols=35 Identities=11% Similarity=-0.122 Sum_probs=23.4
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
++...|..|+-.-+ -.+++.|.++|+.|...-.++
T Consensus 2 li~~~Gt~Ghv~P~-lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 2 LIATGGTRGHVYPF-LALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEEEESSHHHHHHH-HHHHHHHHHTT-EEEEEETGG
T ss_pred EEEEcCChhHHHHH-HHHHHHHhccCCeEEEeeccc
Confidence 45555666666655 788899999999987654443
No 456
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=27.18 E-value=2.9e+02 Score=21.83 Aligned_cols=53 Identities=13% Similarity=0.162 Sum_probs=33.4
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHH
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 103 (318)
.-.+ +=|.+|++..-...++.+++ ++.++-++... .|+..++-+|+..++...
T Consensus 32 Gh~L-LvG~~GsGr~sl~rLaa~i~--~~~~~~i~~~~----------~y~~~~f~~dLk~~~~~a 84 (268)
T PF12780_consen 32 GHAL-LVGVGGSGRQSLARLAAFIC--GYEVFQIEITK----------GYSIKDFKEDLKKALQKA 84 (268)
T ss_dssp EEEE-EECTTTSCHHHHHHHHHHHT--TEEEE-TTTST----------TTHHHHHHHHHHHHHHHH
T ss_pred CCeE-EecCCCccHHHHHHHHHHHh--ccceEEEEeeC----------CcCHHHHHHHHHHHHHHH
Confidence 3344 44666665533355555553 68888887521 168889999999888765
No 457
>PLN02924 thymidylate kinase
Probab=27.17 E-value=1.5e+02 Score=22.57 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=30.1
Q ss_pred CCceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCCC
Q 021023 35 EPKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
...+.+|.+=|..+++..- ...+.+.|..+|+.|+....|+.
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~~ 55 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPDR 55 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 4456688888887776533 36677788788999888877763
No 458
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=27.09 E-value=1.1e+02 Score=23.31 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=22.4
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++-|..+.-. ..+++.|++.|++|++.+.
T Consensus 14 ~vlItG~~g~iG---~~la~~l~~~G~~Vi~~~r 44 (247)
T PRK08945 14 IILVTGAGDGIG---REAALTYARHGATVILLGR 44 (247)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCcEEEEeC
Confidence 455666554433 5688888899999999875
No 459
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=27.06 E-value=89 Score=22.08 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=24.8
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEE
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYG 70 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~ 70 (318)
...+++||.+|.+.... ..+.+.|++.|..++.
T Consensus 39 ~~~~pLVCt~G~p~~A~---~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 39 ASCPPLVCTSGQPSAAA---RRLLDRLAAAGARLYY 71 (152)
T ss_pred CCCCeEEEcCCcHHHHH---HHHHHHHHhCCCEEEE
Confidence 45678999999887665 5688888888876543
No 460
>PLN02165 adenylate isopentenyltransferase
Probab=27.03 E-value=3.6e+02 Score=22.23 Aligned_cols=74 Identities=11% Similarity=0.039 Sum_probs=40.4
Q ss_pred EEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCC----CC--cCC----------------CCCCC-CCCChHhHHH
Q 021023 39 LIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQ----GH--GKS----------------AGLSG-YIDNFDDLVD 94 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~----G~--G~s----------------~~~~~-~~~~~~~~~~ 94 (318)
.+++|-|-.+++. ..++..|+.. ++.++..|-. |. |.. ..... ..++..++.+
T Consensus 44 ~iivIiGPTGSGK---StLA~~LA~~l~~eIIsaDs~QvYkgldIgTakpt~~er~gv~Hhli~~~~~~~~~~sv~~F~~ 120 (334)
T PLN02165 44 KVVVIMGATGSGK---SRLSVDLATRFPSEIINSDKMQVYDGLKITTNQITIQDRRGVPHHLLGELNPDDGELTASEFRS 120 (334)
T ss_pred CEEEEECCCCCcH---HHHHHHHHHHcCCceecCChheeECCcccccCCCCHHHHcCCChhhhheeccccceeeHHHHHH
Confidence 3777777777766 4455666665 6666766643 21 110 00111 1245667777
Q ss_pred HHHHHHHHHHhhhhccCceEEEEEE
Q 021023 95 DCFNHFTSICEKEENKEKMRYLLGE 119 (318)
Q Consensus 95 d~~~~l~~l~~~~~~~~~~~~l~G~ 119 (318)
+....++.+.+ ..+..+++|-
T Consensus 121 ~a~~~I~~i~~----~~~~PI~vGG 141 (334)
T PLN02165 121 LASLSISEITS----RQKLPIVAGG 141 (334)
T ss_pred HHHHHHHHHHH----CCCcEEEECC
Confidence 77777777643 2344556653
No 461
>PRK06762 hypothetical protein; Provisional
Probab=26.96 E-value=84 Score=22.25 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=16.9
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhc
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANE 64 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~ 64 (318)
|.+|++.|..+++. ..+++.|++.
T Consensus 2 ~~li~i~G~~GsGK---ST~A~~L~~~ 25 (166)
T PRK06762 2 TTLIIIRGNSGSGK---TTIAKQLQER 25 (166)
T ss_pred CeEEEEECCCCCCH---HHHHHHHHHH
Confidence 56888999988887 3455666544
No 462
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=26.96 E-value=89 Score=23.66 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=23.5
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|.++|+.|+..+.
T Consensus 7 ~ilItGasg~iG---~~l~~~l~~~g~~v~~~~r 37 (246)
T PRK05653 7 TALVTGASRGIG---RAIALRLAADGAKVVIYDS 37 (246)
T ss_pred EEEEECCCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 466777665544 6788899899999988874
No 463
>PRK06490 glutamine amidotransferase; Provisional
Probab=26.95 E-value=3e+02 Score=21.27 Aligned_cols=84 Identities=15% Similarity=0.183 Sum_probs=43.2
Q ss_pred ceEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCC-CC------cCCC-----CCCCCCCChHhHHHHHHHHHHHHH
Q 021023 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ-GH------GKSA-----GLSGYIDNFDDLVDDCFNHFTSIC 104 (318)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~------G~s~-----~~~~~~~~~~~~~~d~~~~l~~l~ 104 (318)
..++|+.|--.+.. ..+.+.|.+.|+.+-.++.. |- ..-+ +.+...++...+...+.++|+...
T Consensus 8 ~~vlvi~h~~~~~~----g~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~ 83 (239)
T PRK06490 8 RPVLIVLHQERSTP----GRVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPL 83 (239)
T ss_pred ceEEEEecCCCCCC----hHHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHH
Confidence 45566667644443 34555666666665555321 10 0000 111111233345556666666542
Q ss_pred hhhhccCceEEEEEEchhHHHHHHHH
Q 021023 105 EKEENKEKMRYLLGESMGGAMVLLLH 130 (318)
Q Consensus 105 ~~~~~~~~~~~l~G~S~Gg~~a~~~a 130 (318)
. ..+=++|.|+|..+...+.
T Consensus 84 ~------~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 84 K------ENKPFLGICLGAQMLARHL 103 (239)
T ss_pred H------CCCCEEEECHhHHHHHHHc
Confidence 1 2345889999998877654
No 464
>PRK07454 short chain dehydrogenase; Provisional
Probab=26.94 E-value=1.1e+02 Score=23.27 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=22.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
.+++.|..+.-. ..+++.|.++|+.|++.+.
T Consensus 8 ~vlItG~sg~iG---~~la~~l~~~G~~V~~~~r 38 (241)
T PRK07454 8 RALITGASSGIG---KATALAFAKAGWDLALVAR 38 (241)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 455666544433 6788899999999999985
No 465
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.91 E-value=1e+02 Score=26.87 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=32.2
Q ss_pred CCceEEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCC
Q 021023 35 EPKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G 75 (318)
...|+||++-|+-+++..- ...+...|..+|++|+++..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 3578999999988776532 3778888888899999998874
No 466
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=26.90 E-value=80 Score=25.37 Aligned_cols=36 Identities=11% Similarity=-0.091 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.+.+++..+++++++ ...-++|-|+|+.+++.+..-
T Consensus 119 ~YW~El~~i~~w~~~------~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 119 DYWDELKEILDWAKT------HVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred chHHHHHHHHHHHHH------cCCCEEEEcHHHHHHHHHcCC
Confidence 345568888888843 245688999999998877643
No 467
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=26.89 E-value=1.1e+02 Score=23.50 Aligned_cols=32 Identities=19% Similarity=0.080 Sum_probs=23.6
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
++++-|..+.-. ..++..|+++|+.|+.++.+
T Consensus 4 ~vlItG~sg~iG---~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 4 VALVTGGRRGIG---LGIARALAAAGFDLAINDRP 35 (256)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEecC
Confidence 455666554444 67888999999999999865
No 468
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.79 E-value=1.5e+02 Score=25.26 Aligned_cols=37 Identities=22% Similarity=0.105 Sum_probs=27.4
Q ss_pred CCceEEEEEccCCcccccchhHHHHHHHhcCcEEEEec
Q 021023 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (318)
...|.|+++-|-+.+...- .-.+++|+..||.++.+-
T Consensus 264 ~~~P~V~Ilcgpgnnggdg-~v~gRHL~~~G~~~vi~~ 300 (453)
T KOG2585|consen 264 HQWPLVAILCGPGNNGGDG-LVCGRHLAQHGYTPVIYY 300 (453)
T ss_pred CCCceEEEEeCCCCccchh-HHHHHHHHHcCceeEEEe
Confidence 4567788888877776655 558899999998766653
No 469
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=26.74 E-value=1.5e+02 Score=21.70 Aligned_cols=54 Identities=15% Similarity=0.376 Sum_probs=33.3
Q ss_pred EEEeecCCeeEEEEeecCCCCCCceEEEEEccCCcccccchhHHHHHHHhc-CcEEEEecCCCC
Q 021023 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGH 76 (318)
Q Consensus 14 ~~~~~~~g~~l~~~~~~p~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~ 76 (318)
..+...||..+....+ + .|+|...++..+... .+....++++ |+.|+.+...+.
T Consensus 56 ~~f~l~dG~~v~lsd~-----~---lV~FwaswCp~C~~e-~P~L~~l~~~~g~~Vi~Vs~D~~ 110 (181)
T PRK13728 56 RWFRLSNGRQVNLADW-----K---VVLFMQGHCPYCHQF-DPVLKQLAQQYGFSVFPYTLDGQ 110 (181)
T ss_pred CccCCCCCCEeehhHc-----e---EEEEECCCCHhHHHH-HHHHHHHHHHcCCEEEEEEeCCC
Confidence 3444456755555444 1 677777776655555 5555556554 899999987544
No 470
>PRK07069 short chain dehydrogenase; Validated
Probab=26.69 E-value=1e+02 Score=23.50 Aligned_cols=31 Identities=23% Similarity=0.225 Sum_probs=22.9
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
+++.|..+.-. ..+++.|+++|++|+..+..
T Consensus 2 ilVtG~~~~iG---~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLG---RAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45666655444 67888999999999998753
No 471
>PRK07024 short chain dehydrogenase; Provisional
Probab=26.62 E-value=1e+02 Score=23.74 Aligned_cols=32 Identities=13% Similarity=0.035 Sum_probs=23.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|+++|++|+..+.+
T Consensus 4 ~vlItGas~gIG---~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 4 KVFITGASSGIG---QALAREYARQGATLGLVARR 35 (257)
T ss_pred EEEEEcCCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 356666655444 67888899999999998864
No 472
>PRK07933 thymidylate kinase; Validated
Probab=26.61 E-value=1.5e+02 Score=22.37 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=28.2
Q ss_pred EEEEccCCccccc-chhHHHHHHHhcCcEEEEecCCCCcCC
Q 021023 40 IFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKS 79 (318)
Q Consensus 40 iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s 79 (318)
+|.+=|.-+++.. -...+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4555565555432 236788888888999999999977644
No 473
>PRK08226 short chain dehydrogenase; Provisional
Probab=26.60 E-value=1.1e+02 Score=23.64 Aligned_cols=32 Identities=16% Similarity=0.080 Sum_probs=23.9
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..+++.|+++|+.|+..+..
T Consensus 8 ~~lItG~s~giG---~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 8 TALITGALQGIG---EGIARVFARHGANLILLDIS 39 (263)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEecCC
Confidence 456777665544 56888999999999999753
No 474
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=26.50 E-value=1.1e+02 Score=24.15 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=25.5
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
-+++-|..+.-. ..+++.|+++||+++.+-.+
T Consensus 8 ~~lITGASsGIG---~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 8 TALITGASSGIG---AELAKQLARRGYNLILVARR 39 (265)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeCc
Confidence 456777666655 78999999999999999764
No 475
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=26.41 E-value=27 Score=25.32 Aligned_cols=37 Identities=8% Similarity=-0.068 Sum_probs=27.8
Q ss_pred HhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhh
Q 021023 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (318)
Q Consensus 90 ~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (318)
.++-+.+.+++++.++ .-.-.+|-|||+..|+.++.-
T Consensus 81 v~Yw~El~~i~dwa~~------~v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 81 VDYWEELTEILDWAKT------HVTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred cchHHHHHHHHHHHHH------hCcchHHHHHHHHHHHHHHcC
Confidence 4456678999999843 234678999999999988753
No 476
>PRK00081 coaE dephospho-CoA kinase; Reviewed
Probab=26.32 E-value=1.4e+02 Score=22.07 Aligned_cols=34 Identities=21% Similarity=0.081 Sum_probs=24.8
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH 76 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 76 (318)
+|.+-|..+++. ..++..|.+.|+.++..|.-.+
T Consensus 4 ~i~ltG~~gsGK---st~~~~l~~~g~~~i~~D~~~~ 37 (194)
T PRK00081 4 IIGLTGGIGSGK---STVANLFAELGAPVIDADAIAH 37 (194)
T ss_pred EEEEECCCCCCH---HHHHHHHHHcCCEEEEecHHHH
Confidence 677777777766 4566777777999988886544
No 477
>PRK10673 acyl-CoA esterase; Provisional
Probab=26.30 E-value=2.9e+02 Score=20.95 Aligned_cols=63 Identities=22% Similarity=0.242 Sum_probs=36.4
Q ss_pred cccEEEEEeCCCcccChHHHHHHHHHhcCCCceEEEecCCcccccccCCccchHHHHHHHHHHHHHH
Q 021023 229 SIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDER 295 (318)
Q Consensus 229 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~i~~fl~~~ 295 (318)
..|++++||.-+... .-..+...+. .+..++.++--||......+....+...+.+.++++..
T Consensus 16 ~~~iv~lhG~~~~~~---~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 16 NSPIVLVHGLFGSLD---NLGVLARDLV-NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL 78 (255)
T ss_pred CCCEEEECCCCCchh---HHHHHHHHHh-hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 468999999765432 2223344443 34577777766776443222234455677777777653
No 478
>PRK07791 short chain dehydrogenase; Provisional
Probab=26.30 E-value=3.2e+02 Score=21.56 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=24.2
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
++++-|.++.-. ..++..|++.|++|+..+.+
T Consensus 8 ~~lITGas~GIG---~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 8 VVIVTGAGGGIG---RAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEeeCC
Confidence 567777665444 67888999999999998753
No 479
>PRK14734 coaE dephospho-CoA kinase; Provisional
Probab=26.21 E-value=1.2e+02 Score=22.59 Aligned_cols=31 Identities=19% Similarity=0.087 Sum_probs=23.9
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (318)
+|.+.|..+++. ..++..|...|+.++-.|-
T Consensus 3 ~igitG~igsGK---st~~~~l~~~g~~vid~D~ 33 (200)
T PRK14734 3 RIGLTGGIGSGK---STVADLLSSEGFLIVDADQ 33 (200)
T ss_pred EEEEECCCCCCH---HHHHHHHHHCCCeEEeCcH
Confidence 678888888877 4577788778998887773
No 480
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=26.19 E-value=1.1e+02 Score=22.03 Aligned_cols=73 Identities=14% Similarity=0.128 Sum_probs=43.0
Q ss_pred EEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCCCCC-----CCCCChHhHHHHHHHHHHHHHhhhhccCceEE
Q 021023 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-----GYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (318)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~ 115 (318)
|++-|.|++...- +.++..|..+ |..-.+-+|..-.|.... ...|.++.. ....++.+ +..-=+
T Consensus 44 vl~cGNGgSaadA-qHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~------g~~GDv 112 (176)
T COG0279 44 VLACGNGGSAADA-QHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEAL------GQPGDV 112 (176)
T ss_pred EEEECCCcchhhH-HHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhc------CCCCCE
Confidence 4555777776666 8888888776 766666666655443211 112344433 33444444 445557
Q ss_pred EEEEchhHH
Q 021023 116 LLGESMGGA 124 (318)
Q Consensus 116 l~G~S~Gg~ 124 (318)
|+|.|--|.
T Consensus 113 LigISTSGN 121 (176)
T COG0279 113 LIGISTSGN 121 (176)
T ss_pred EEEEeCCCC
Confidence 888888774
No 481
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=26.19 E-value=1.7e+02 Score=19.36 Aligned_cols=33 Identities=18% Similarity=0.176 Sum_probs=22.1
Q ss_pred EccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 43 CHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 43 ~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
+=|...+...+-..+.+.|.+.||.|+.++.++
T Consensus 5 VvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 5 VVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG 37 (116)
T ss_dssp EET--SSTTSHHHHHHHHHHHTT-EEEEESTTC
T ss_pred EEcccCCCCChHHHHHHHHHhCCCEEEEECCCc
Confidence 445555545454667788888999999999887
No 482
>PF01121 CoaE: Dephospho-CoA kinase; InterPro: IPR001977 This family contains dephospho-CoA kinases (2.7.1.24 from EC), which catalyzes the final step in CoA biosynthesis, the phosphorylation of the 3'-hydroxyl group of ribose using ATP as a phosphate donor. The crystal structures of a number of the proteins in this entry have been determined, including the structure of the protein from Haemophilus influenzae to 2.0-A resolution in a comlex with ATP. The protein consists of three domains: the nucleotide-binding domain with a five-stranded parallel beta-sheet, the substrate-binding alpha-helical domain, and the lid domain formed by a pair of alpha-helices; the overall topology of the protein resembles the structures of other nucleotide kinases [].; GO: 0004140 dephospho-CoA kinase activity, 0005524 ATP binding, 0015937 coenzyme A biosynthetic process; PDB: 1VHL_A 1N3B_A 1VIY_A 1VHT_B 1T3H_B 1UF9_C 2F6R_A 2GRJ_D 2IF2_C 1JJV_A.
Probab=26.19 E-value=1.1e+02 Score=22.42 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=25.7
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCc
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG 77 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 77 (318)
+|-+-|.-+++. ..++..|.+.|+.|+-.|.-+|-
T Consensus 2 iIglTG~igsGK---Stv~~~l~~~G~~vidaD~i~~~ 36 (180)
T PF01121_consen 2 IIGLTGGIGSGK---STVSKILAELGFPVIDADEIAHE 36 (180)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHTT-EEEEHHHHHHH
T ss_pred EEEEECCCcCCH---HHHHHHHHHCCCCEECccHHHHH
Confidence 566777777766 45778888899999999876653
No 483
>PTZ00445 p36-lilke protein; Provisional
Probab=26.17 E-value=3e+02 Score=20.96 Aligned_cols=64 Identities=11% Similarity=-0.048 Sum_probs=37.6
Q ss_pred hHHHHHHHhcCcEEEEecCCCC------cCCCCCC-CCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchh
Q 021023 55 NSTAIRLANEGYACYGIDYQGH------GKSAGLS-GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMG 122 (318)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~G~------G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~G 122 (318)
..+.+.|.+.|..+++.|+-.. |.-..+. ....-......++..++..+.+ ..-++.|+-+|--
T Consensus 32 ~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~----~~I~v~VVTfSd~ 102 (219)
T PTZ00445 32 DKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN----SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH----CCCeEEEEEccch
Confidence 6778889899999999998542 1111111 0000111223456666666643 3558889988854
No 484
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=26.08 E-value=2e+02 Score=21.26 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=22.7
Q ss_pred EEEccCCcc-cccchhHHHHHHHh----cCcEEEEecCCCCcCC
Q 021023 41 FICHGYAME-CSIGMNSTAIRLAN----EGYACYGIDYQGHGKS 79 (318)
Q Consensus 41 v~~hG~~~~-~~~~~~~~~~~l~~----~g~~v~~~d~~G~G~s 79 (318)
+++-|..++ ...+...++..++. ....++.+|..|.+..
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~ 84 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLA 84 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCG
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccc
Confidence 334444444 34344666777766 5799999999876433
No 485
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=26.06 E-value=1.3e+02 Score=24.42 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=25.2
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
.+++-|..+.-. ..+++.|.++|+.|++.+.+.
T Consensus 8 ~vlVTGatGfiG---~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 8 VALITGITGQDG---SYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred EEEEECCCCccH---HHHHHHHHHCCCEEEEEeccc
Confidence 467777666555 568899999999999988654
No 486
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=26.03 E-value=3.9e+02 Score=22.89 Aligned_cols=75 Identities=9% Similarity=0.019 Sum_probs=42.7
Q ss_pred eEEEEEccCCcc--cccchhHHHHHHHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhh-hccCceE
Q 021023 38 ALIFICHGYAME--CSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKE-ENKEKMR 114 (318)
Q Consensus 38 ~~iv~~hG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~-~~~~~~~ 114 (318)
|-+|++-..+.+ ...-+..+++.+.+.|..|+.++-+|+..+.. ..+..-+.++++.+.... ......|
T Consensus 87 p~~I~V~ttC~~~~IGdDi~~v~~~~~~~~~~vi~v~t~gf~g~~~--------~G~~~a~~al~~~~~~~~~~~~~~~V 158 (427)
T cd01971 87 ADLFVVLTGCIAEIIGDDVGAVVSEFQEGGAPIVYLETGGFKGNNY--------AGHEIVLKAIIDQYVGQSEEKEPGLV 158 (427)
T ss_pred CCEEEEEcCCcHHHhhcCHHHHHHHhhhcCCCEEEEECCCcCcccc--------cHHHHHHHHHHHHhccCCCCCCCCeE
Confidence 445555554432 22223777777755589999999999866431 222333455555553221 1244578
Q ss_pred EEEEEc
Q 021023 115 YLLGES 120 (318)
Q Consensus 115 ~l~G~S 120 (318)
.|+|.+
T Consensus 159 NiiG~~ 164 (427)
T cd01971 159 NLWGPV 164 (427)
T ss_pred EEEecc
Confidence 899864
No 487
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=26.00 E-value=2.9e+02 Score=20.79 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=27.9
Q ss_pred CChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHH
Q 021023 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLH 130 (318)
Q Consensus 87 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a 130 (318)
++-.+|+--+..+++.+ ...+.=++|-++|-.+..++.
T Consensus 73 f~d~dWI~KLcs~~kkl------d~mkkkvlGICFGHQiiara~ 110 (245)
T KOG3179|consen 73 FSDADWIKKLCSFVKKL------DFMKKKVLGICFGHQIIARAK 110 (245)
T ss_pred cccchHHHHHHHHHHHH------HhhccceEEEeccHHHHHHhh
Confidence 35566777777777777 455567889999998877765
No 488
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=25.97 E-value=1.2e+02 Score=23.26 Aligned_cols=32 Identities=22% Similarity=0.130 Sum_probs=24.2
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++-|..+.-. ..+++.|.++|+.|++.+..
T Consensus 3 ~vlItGa~g~lG---~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 3 TALVTGAASGIG---LAIALALAAAGANVVVNDLG 34 (255)
T ss_pred EEEEcCCcchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 366777665544 67888998999999999864
No 489
>PRK14527 adenylate kinase; Provisional
Probab=25.95 E-value=63 Score=23.66 Aligned_cols=26 Identities=31% Similarity=0.268 Sum_probs=19.4
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhc
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANE 64 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~ 64 (318)
++|.++++.|.+++.. ..++..|+++
T Consensus 4 ~~~~~i~i~G~pGsGK---sT~a~~La~~ 29 (191)
T PRK14527 4 TKNKVVIFLGPPGAGK---GTQAERLAQE 29 (191)
T ss_pred CCCcEEEEECCCCCCH---HHHHHHHHHH
Confidence 3567999999999888 4566677655
No 490
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=25.95 E-value=3.5e+02 Score=21.79 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=22.5
Q ss_pred EEEEccCC--cccccchhHHHHHHHhcCcEEEEecCCC
Q 021023 40 IFICHGYA--MECSIGMNSTAIRLANEGYACYGIDYQG 75 (318)
Q Consensus 40 iv~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G 75 (318)
+++++|.+ |... ....+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~-~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEK-QVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHH-HHHHHHHhcccCCceEEEEEEeC
Confidence 44555543 3333 33678889988899888776544
No 491
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family. This subfamily of the adenylate kinase superfamily contains examples of UMP-CMP kinase, as well as others proteins with unknown specificity, some currently designated adenylate kinase. All known members are eukaryotic.
Probab=25.88 E-value=86 Score=22.63 Aligned_cols=29 Identities=7% Similarity=0.227 Sum_probs=20.6
Q ss_pred EEEEccCCcccccchhHHHHHHHhc-CcEEEEe
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANE-GYACYGI 71 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~ 71 (318)
||++.|.++++. ..++..|+++ |+..+..
T Consensus 1 ~i~i~G~pGsGK---st~a~~la~~~~~~~is~ 30 (183)
T TIGR01359 1 VVFVLGGPGSGK---GTQCAKIVENFGFTHLSA 30 (183)
T ss_pred CEEEECCCCCCH---HHHHHHHHHHcCCeEEEC
Confidence 578889888887 4566777665 6666665
No 492
>PRK06114 short chain dehydrogenase; Provisional
Probab=25.80 E-value=1.1e+02 Score=23.42 Aligned_cols=32 Identities=22% Similarity=0.216 Sum_probs=23.6
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++.|..+.-. ..++..|+++|++|+..+.+
T Consensus 10 ~~lVtG~s~gIG---~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 10 VAFVTGAGSGIG---QRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 455666555444 67889999999999998754
No 493
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=25.77 E-value=1.6e+02 Score=21.16 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=31.2
Q ss_pred EEEEEccCCcccccc-hhHHHHHHHhcCcEEEEecCCCCc
Q 021023 39 LIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHG 77 (318)
Q Consensus 39 ~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G 77 (318)
.|+=+-|+..++..- ...+++.|..+||+|.++-..+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 366677777665533 578889999999999999999998
No 494
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=25.63 E-value=1.2e+02 Score=18.52 Aligned_cols=31 Identities=23% Similarity=0.119 Sum_probs=20.5
Q ss_pred EEccCCccccc-chhHHHHHHHhcCcEEEEec
Q 021023 42 ICHGYAMECSI-GMNSTAIRLANEGYACYGID 72 (318)
Q Consensus 42 ~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d 72 (318)
++-|.++.... ....++..|++.|++|+.+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 33344443332 23677888888899999998
No 495
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=25.59 E-value=2.3e+02 Score=20.53 Aligned_cols=53 Identities=11% Similarity=0.143 Sum_probs=32.4
Q ss_pred HHhcCcEEEEecCCCCcCCCCCCCCCCChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchh
Q 021023 61 LANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMG 122 (318)
Q Consensus 61 l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~G 122 (318)
|.+.|+..+.+|.=+.=..... .+...++.+.++.+++ ....+++.++.-|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~-------~~i~~~~~~~~~~l~~--~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE-------DEIPPEYAEWLNELKK--QFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc-------CcCCHHHHHHHHHHHH--HCCCCeEEEEECCCC
Confidence 7788999999998665322211 1222344444555522 224458999999986
No 496
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=25.52 E-value=5e+02 Score=23.39 Aligned_cols=94 Identities=11% Similarity=0.014 Sum_probs=46.6
Q ss_pred eEEEEEccCCcccccchhHHHHHHHhcCcEEEEecCCCCcCCC--CCCC-CCCChHhHHHHHHHHHHHHHhhhhccCceE
Q 021023 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA--GLSG-YIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (318)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~--~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~ 114 (318)
..+|++-|-++... - ..+++++.+.|+.+-++=.|..-..+ .... ....++..++-+..++..+........+.+
T Consensus 192 d~LViIGGddS~~~-A-~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ni~~da~S~~k~~ 269 (568)
T PLN02251 192 DGLVVIGGDDSNTN-A-CLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYY 269 (568)
T ss_pred CEEEEeCCchHHHH-H-HHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCEE
Confidence 34666655444433 3 56777787778555554334332222 1110 123566666666666666643222122222
Q ss_pred ---EEEEEchhHHHHHHHHh-hCC
Q 021023 115 ---YLLGESMGGAMVLLLHR-KKP 134 (318)
Q Consensus 115 ---~l~G~S~Gg~~a~~~a~-~~p 134 (318)
=++|-+.| ++|+..+. ..|
T Consensus 270 ~~VevMGR~aG-~LAL~~aLat~p 292 (568)
T PLN02251 270 HFVRLMGRAAS-HITLECALQTHP 292 (568)
T ss_pred EEEEeCCCchH-HHHHHHHHhhCC
Confidence 26787775 55555543 344
No 497
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=25.35 E-value=56 Score=26.76 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=14.9
Q ss_pred EEEEEEchhHHHHHHHHh
Q 021023 114 RYLLGESMGGAMVLLLHR 131 (318)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~ 131 (318)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999998888774
No 498
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=25.31 E-value=1.8e+02 Score=20.83 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHhhhhccCceEEEEEEc--hhHHHHHHHHhh
Q 021023 91 DLVDDCFNHFTSICEKEENKEKMRYLLGES--MGGAMVLLLHRK 132 (318)
Q Consensus 91 ~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 132 (318)
--..-+.+++++. ......+++.++|.| .|--++..+..+
T Consensus 18 cTp~aii~lL~~~--~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 18 CTPLAIIELLEYY--GIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHHT--T-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhc--CCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 3455667777765 334467899999999 577777777665
No 499
>PRK04220 2-phosphoglycerate kinase; Provisional
Probab=25.31 E-value=3.7e+02 Score=21.77 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=50.8
Q ss_pred CceEEEEEccCCcccccchhHHHHHHHhc-CcE-EEEecC--------------CCCcCCC---------CCCC---CCC
Q 021023 36 PKALIFICHGYAMECSIGMNSTAIRLANE-GYA-CYGIDY--------------QGHGKSA---------GLSG---YID 87 (318)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~-v~~~d~--------------~G~G~s~---------~~~~---~~~ 87 (318)
..|.+|++-|.++++. ..++..|+.+ |+. |+.-|. |+.-.|. .+.. ...
T Consensus 90 ~~p~iIlI~G~sgsGK---StlA~~La~~l~~~~vi~~D~~re~~R~~~~~e~~p~L~~S~Y~a~~~l~~~~~~~~~~l~ 166 (301)
T PRK04220 90 KEPIIILIGGASGVGT---STIAFELASRLGIRSVIGTDSIREVMRKIISKELLPTLHESSYTAWKSLRRPPPPEPPVIY 166 (301)
T ss_pred CCCEEEEEECCCCCCH---HHHHHHHHHHhCCCEEEechHHHHHHHHhcchhhccchhhhhhhhhhcccCCCCCchhhhh
Confidence 4688899999888877 3355556554 554 443332 2221121 0000 112
Q ss_pred ChHhHHHHHHHHHHHHHhhhhccCceEEEEEEchhHHHHHHHHhhCCCCcCEEEE
Q 021023 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVL 142 (318)
Q Consensus 88 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl 142 (318)
.+...++.+...++.+.+.......++++=|...=-.+.-.....+|..+.-++.
T Consensus 167 g~~~~~~~v~~gi~~~I~~~~~~g~s~IiEGvhl~P~~i~~~~~~~~~~i~~~l~ 221 (301)
T PRK04220 167 GFERHVEPVSVGVEAVIERALKEGISVIIEGVHIVPGFIKEKYLENPNVFMFVLT 221 (301)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcEEEecCCCCHHHHHHhhhcCCCEEEEEEE
Confidence 2333343333334443333222567788888776444444444456654443333
No 500
>PRK06483 dihydromonapterin reductase; Provisional
Probab=25.31 E-value=1.1e+02 Score=23.04 Aligned_cols=32 Identities=13% Similarity=0.007 Sum_probs=0.0
Q ss_pred EEEEccCCcccccchhHHHHHHHhcCcEEEEecCC
Q 021023 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (318)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (318)
.+++-|.++.-. ..++..|+++|++|+..+..
T Consensus 4 ~vlItGas~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (236)
T PRK06483 4 PILITGAGQRIG---LALAWHLLAQGQPVIVSYRT 35 (236)
T ss_pred eEEEECCCChHH---HHHHHHHHHCCCeEEEEeCC
Done!