Query 021029
Match_columns 318
No_of_seqs 158 out of 1406
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:02:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 6.6E-35 1.4E-39 260.4 25.8 269 12-290 19-296 (302)
2 PTZ00343 triose or hexose phos 100.0 1.9E-34 4.1E-39 261.3 29.0 271 11-288 65-349 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1.8E-34 3.9E-39 252.0 16.0 280 9-293 31-313 (316)
4 PLN00411 nodulin MtN21 family 100.0 8.5E-31 1.9E-35 236.6 28.8 272 12-292 30-333 (358)
5 PF06027 DUF914: Eukaryotic pr 100.0 3.7E-27 8E-32 208.8 24.9 269 14-292 32-310 (334)
6 PRK11272 putative DMT superfam 100.0 2.2E-26 4.8E-31 204.3 28.3 258 14-289 27-287 (292)
7 PF08449 UAA: UAA transporter 100.0 2.1E-26 4.5E-31 205.4 26.4 270 14-292 19-302 (303)
8 PRK11453 O-acetylserine/cystei 100.0 4.7E-26 1E-30 202.9 27.2 258 14-289 23-289 (299)
9 PRK11689 aromatic amino acid e 100.0 6E-26 1.3E-30 201.8 26.2 252 14-289 23-289 (295)
10 TIGR00950 2A78 Carboxylate/Ami 100.0 1.5E-25 3.1E-30 196.0 27.3 251 14-282 8-259 (260)
11 PRK15430 putative chlorampheni 99.9 9.3E-26 2E-30 200.6 25.1 253 24-289 32-287 (296)
12 KOG1443 Predicted integral mem 99.9 1.4E-26 3E-31 195.4 17.9 272 15-287 32-315 (349)
13 PRK10532 threonine and homoser 99.9 3.9E-25 8.4E-30 196.4 27.4 257 9-291 26-285 (293)
14 KOG1444 Nucleotide-sugar trans 99.9 1.3E-24 2.9E-29 186.0 20.8 278 10-295 27-308 (314)
15 KOG1442 GDP-fucose transporter 99.9 3.8E-25 8.2E-30 183.8 3.4 281 11-295 44-335 (347)
16 TIGR03340 phn_DUF6 phosphonate 99.9 5.8E-22 1.3E-26 175.1 23.5 250 31-284 30-280 (281)
17 TIGR00688 rarD rarD protein. T 99.9 8.2E-21 1.8E-25 165.6 23.1 226 24-261 26-255 (256)
18 COG0697 RhaT Permeases of the 99.9 7E-19 1.5E-23 155.8 29.0 247 28-288 36-288 (292)
19 COG5006 rhtA Threonine/homoser 99.9 8.9E-20 1.9E-24 150.5 19.9 252 13-290 30-285 (292)
20 COG5070 VRG4 Nucleotide-sugar 99.8 8.3E-20 1.8E-24 147.8 15.2 271 12-294 23-303 (309)
21 KOG1581 UDP-galactose transpor 99.8 4.9E-19 1.1E-23 150.0 19.7 261 22-291 45-317 (327)
22 KOG2765 Predicted membrane pro 99.8 5.5E-19 1.2E-23 153.6 19.1 227 63-290 157-393 (416)
23 KOG1580 UDP-galactose transpor 99.8 1.3E-19 2.8E-24 147.9 13.4 260 23-290 48-316 (337)
24 COG2962 RarD Predicted permeas 99.8 9.7E-17 2.1E-21 136.1 24.0 256 24-292 31-288 (293)
25 TIGR00776 RhaT RhaT L-rhamnose 99.8 6.3E-17 1.4E-21 143.2 23.6 243 24-287 25-288 (290)
26 PF04142 Nuc_sug_transp: Nucle 99.8 6.9E-17 1.5E-21 138.6 19.4 209 61-277 14-243 (244)
27 KOG3912 Predicted integral mem 99.8 1.6E-16 3.6E-21 133.0 19.4 259 24-287 35-334 (372)
28 KOG2234 Predicted UDP-galactos 99.7 4.3E-15 9.3E-20 129.6 27.4 268 15-291 35-326 (345)
29 KOG1583 UDP-N-acetylglucosamin 99.7 7.3E-18 1.6E-22 140.8 9.0 249 29-290 34-317 (330)
30 KOG1582 UDP-galactose transpor 99.7 1.1E-16 2.5E-21 133.3 11.6 264 14-289 62-334 (367)
31 KOG4510 Permease of the drug/m 99.7 3.4E-18 7.4E-23 142.1 1.7 255 21-288 58-326 (346)
32 PF03151 TPT: Triose-phosphate 99.7 6.4E-16 1.4E-20 124.0 13.5 141 146-287 1-153 (153)
33 KOG2766 Predicted membrane pro 99.6 9.7E-16 2.1E-20 126.8 3.3 257 14-289 37-301 (336)
34 PF00892 EamA: EamA-like trans 99.3 1.5E-11 3.2E-16 94.8 10.0 117 12-136 8-125 (126)
35 TIGR00803 nst UDP-galactose tr 99.3 2E-11 4.4E-16 104.1 11.6 190 89-285 2-222 (222)
36 KOG4314 Predicted carbohydrate 99.3 2.2E-11 4.9E-16 97.4 8.7 229 58-290 46-279 (290)
37 PF13536 EmrE: Multidrug resis 99.2 4E-11 8.7E-16 91.0 8.8 107 33-141 2-110 (113)
38 PF00892 EamA: EamA-like trans 99.2 2.6E-10 5.6E-15 87.8 10.1 125 155-286 1-125 (126)
39 COG2510 Predicted membrane pro 99.2 6E-10 1.3E-14 83.1 11.0 133 147-285 5-137 (140)
40 COG2510 Predicted membrane pro 99.2 1.4E-10 3E-15 86.4 7.4 117 14-136 22-138 (140)
41 PF06800 Sugar_transport: Suga 99.0 2.1E-07 4.5E-12 80.1 21.7 209 62-284 43-268 (269)
42 PRK15430 putative chlorampheni 98.8 1.5E-07 3.2E-12 83.9 14.5 140 140-286 3-144 (296)
43 TIGR00688 rarD rarD protein. T 98.8 1.8E-07 4E-12 81.5 14.4 136 145-286 2-141 (256)
44 TIGR03340 phn_DUF6 phosphonate 98.8 1.9E-07 4.1E-12 82.5 14.6 132 147-287 3-135 (281)
45 TIGR00950 2A78 Carboxylate/Ami 98.7 2.1E-07 4.6E-12 81.1 12.8 114 13-133 146-260 (260)
46 PF05653 Mg_trans_NIPA: Magnes 98.5 1.4E-06 2.9E-11 77.4 11.8 210 73-289 58-294 (300)
47 PLN00411 nodulin MtN21 family 98.5 2.9E-06 6.3E-11 77.2 13.9 137 146-287 14-156 (358)
48 PRK15051 4-amino-4-deoxy-L-ara 98.5 3.4E-06 7.3E-11 63.5 11.9 65 72-136 44-108 (111)
49 PRK11272 putative DMT superfam 98.3 1.1E-05 2.5E-10 71.6 12.8 109 28-138 177-286 (292)
50 PF03151 TPT: Triose-phosphate 98.3 1.4E-05 3E-10 63.7 11.9 122 13-135 18-151 (153)
51 PTZ00343 triose or hexose phos 98.2 4.9E-05 1.1E-09 69.3 15.3 138 144-287 48-186 (350)
52 PRK11689 aromatic amino acid e 98.2 5.5E-05 1.2E-09 67.3 14.5 130 145-287 4-137 (295)
53 PRK10532 threonine and homoser 98.2 3.8E-05 8.2E-10 68.3 12.9 105 28-137 176-281 (293)
54 PRK02971 4-amino-4-deoxy-L-ara 98.2 0.00012 2.7E-09 56.4 13.9 121 145-289 2-124 (129)
55 PRK11453 O-acetylserine/cystei 98.1 0.00012 2.6E-09 65.3 14.7 125 147-287 6-132 (299)
56 PRK13499 rhamnose-proton sympo 98.0 0.0027 5.8E-08 57.2 21.8 218 66-288 74-342 (345)
57 TIGR00817 tpt Tpt phosphate/ph 98.0 0.0002 4.4E-09 63.9 14.5 124 156-286 13-136 (302)
58 PF13536 EmrE: Multidrug resis 97.9 0.00013 2.8E-09 55.1 10.1 71 217-289 37-108 (113)
59 PRK02971 4-amino-4-deoxy-L-ara 97.9 0.0001 2.2E-09 56.9 8.7 71 68-138 51-123 (129)
60 KOG2922 Uncharacterized conser 97.9 3.4E-05 7.3E-10 67.2 6.6 66 72-137 71-136 (335)
61 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00024 5.2E-09 63.1 11.6 131 146-288 2-137 (290)
62 PF08449 UAA: UAA transporter 97.8 0.00052 1.1E-08 61.3 13.9 130 156-291 11-140 (303)
63 COG2962 RarD Predicted permeas 97.8 0.00036 7.8E-09 60.2 11.7 141 142-288 4-145 (293)
64 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.0011 2.3E-08 49.9 12.7 56 230-286 53-108 (111)
65 PF04657 DUF606: Protein of un 97.8 0.0019 4E-08 50.6 14.2 130 147-283 3-137 (138)
66 PF06027 DUF914: Eukaryotic pr 97.7 0.0008 1.7E-08 60.5 13.4 139 145-288 13-152 (334)
67 COG0697 RhaT Permeases of the 97.7 0.0022 4.8E-08 56.3 15.7 140 143-290 5-146 (292)
68 PRK10452 multidrug efflux syst 97.6 0.00051 1.1E-08 52.1 8.3 70 68-137 33-103 (120)
69 PRK09541 emrE multidrug efflux 97.4 0.0013 2.8E-08 49.2 8.3 69 69-137 34-103 (110)
70 PRK10452 multidrug efflux syst 97.3 0.0018 3.9E-08 49.1 8.1 55 234-289 50-105 (120)
71 COG4975 GlcU Putative glucose 97.3 0.00014 2.9E-09 61.1 2.2 214 59-286 54-284 (288)
72 PRK11431 multidrug efflux syst 97.2 0.0031 6.8E-08 46.7 8.6 69 68-136 32-101 (105)
73 PRK10650 multidrug efflux syst 97.2 0.0032 7E-08 46.9 8.7 68 68-135 38-106 (109)
74 PF04142 Nuc_sug_transp: Nucle 97.2 0.0012 2.6E-08 56.9 7.4 76 215-291 18-93 (244)
75 COG2076 EmrE Membrane transpor 97.2 0.0032 6.9E-08 46.3 8.1 70 68-137 33-103 (106)
76 PF07857 DUF1632: CEO family ( 97.0 0.002 4.3E-08 55.5 6.9 132 146-291 1-138 (254)
77 PRK13499 rhamnose-proton sympo 96.9 0.012 2.7E-07 53.0 11.4 138 143-289 5-155 (345)
78 PRK09541 emrE multidrug efflux 96.9 0.0064 1.4E-07 45.4 8.0 54 235-289 51-105 (110)
79 COG3238 Uncharacterized protei 96.9 0.071 1.5E-06 41.9 13.5 139 144-288 4-147 (150)
80 PRK10650 multidrug efflux syst 96.8 0.039 8.4E-07 41.1 11.4 52 234-286 55-107 (109)
81 PF00893 Multi_Drug_Res: Small 96.7 0.0065 1.4E-07 44.0 6.5 60 69-128 33-93 (93)
82 COG5006 rhtA Threonine/homoser 96.7 0.023 4.9E-07 48.2 10.0 101 30-134 178-279 (292)
83 COG2076 EmrE Membrane transpor 96.6 0.019 4.2E-07 42.2 8.1 54 234-288 50-104 (106)
84 PF05653 Mg_trans_NIPA: Magnes 96.6 0.01 2.2E-07 52.8 8.2 119 142-287 4-122 (300)
85 PRK11431 multidrug efflux syst 96.6 0.017 3.7E-07 42.7 8.0 53 234-287 49-102 (105)
86 KOG4510 Permease of the drug/m 96.5 0.00057 1.2E-08 58.1 -0.3 134 145-289 38-171 (346)
87 KOG2234 Predicted UDP-galactos 96.4 0.13 2.9E-06 45.9 13.8 138 149-288 19-165 (345)
88 PF10639 UPF0546: Uncharacteri 96.0 0.02 4.3E-07 42.8 5.7 63 73-135 49-112 (113)
89 PF06800 Sugar_transport: Suga 96.0 0.06 1.3E-06 46.7 9.5 111 176-291 11-126 (269)
90 TIGR00803 nst UDP-galactose tr 95.9 0.048 1E-06 46.3 8.3 65 70-134 157-221 (222)
91 PF04657 DUF606: Protein of un 95.8 0.22 4.8E-06 38.9 11.0 105 27-134 29-138 (138)
92 KOG1441 Glucose-6-phosphate/ph 95.5 0.012 2.6E-07 52.4 3.3 120 14-136 182-306 (316)
93 KOG1580 UDP-galactose transpor 95.2 0.11 2.4E-06 43.7 7.7 64 228-292 99-162 (337)
94 KOG1581 UDP-galactose transpor 94.5 0.12 2.6E-06 45.1 6.5 120 12-134 189-310 (327)
95 PF00893 Multi_Drug_Res: Small 94.0 0.18 3.8E-06 36.5 5.6 47 231-278 46-93 (93)
96 COG3238 Uncharacterized protei 93.0 1.9 4.1E-05 34.0 10.2 110 25-136 31-145 (150)
97 COG4975 GlcU Putative glucose 92.7 0.18 4E-06 42.7 4.4 131 146-289 3-138 (288)
98 KOG2765 Predicted membrane pro 92.3 0.17 3.7E-06 45.5 4.0 74 216-290 161-234 (416)
99 PF06379 RhaT: L-rhamnose-prot 90.4 4.1 8.9E-05 36.6 10.6 138 144-290 6-156 (344)
100 PF06379 RhaT: L-rhamnose-prot 90.0 14 0.00031 33.2 18.3 223 65-288 73-341 (344)
101 KOG4314 Predicted carbohydrate 88.9 0.26 5.6E-06 40.4 1.8 64 226-290 65-128 (290)
102 COG5070 VRG4 Nucleotide-sugar 86.6 7.6 0.00017 32.7 9.0 100 30-130 187-289 (309)
103 PF10639 UPF0546: Uncharacteri 83.1 1.4 3E-05 33.0 3.0 50 234-284 61-111 (113)
104 KOG3912 Predicted integral mem 82.3 27 0.00059 30.6 10.8 65 221-286 93-157 (372)
105 KOG2922 Uncharacterized conser 79.7 0.42 9.1E-06 42.2 -0.8 120 142-288 18-137 (335)
106 PRK06638 NADH:ubiquinone oxido 77.0 42 0.0009 27.9 11.8 24 256-280 134-157 (198)
107 PF04342 DUF486: Protein of un 73.4 4 8.6E-05 29.9 2.9 29 255-284 77-105 (108)
108 TIGR00892 2A0113 monocarboxyla 72.9 34 0.00075 32.2 10.1 14 304-317 442-455 (455)
109 KOG1444 Nucleotide-sugar trans 72.4 72 0.0016 28.5 11.9 132 149-287 16-149 (314)
110 PF02694 UPF0060: Uncharacteri 69.8 9.1 0.0002 28.1 4.1 40 99-138 65-104 (107)
111 PRK02237 hypothetical protein; 69.0 11 0.00024 27.8 4.3 45 244-289 63-107 (109)
112 PF02694 UPF0060: Uncharacteri 68.4 9.8 0.00021 28.0 4.0 45 244-289 61-105 (107)
113 PRK02237 hypothetical protein; 68.4 46 0.00099 24.6 9.6 39 99-137 67-105 (109)
114 PF04342 DUF486: Protein of un 66.4 50 0.0011 24.3 9.6 61 75-135 45-106 (108)
115 MTH00057 ND6 NADH dehydrogenas 65.6 75 0.0016 26.1 10.0 26 256-282 133-158 (186)
116 KOG1582 UDP-galactose transpor 65.4 51 0.0011 28.9 8.3 113 30-143 222-338 (367)
117 PF15471 TMEM171: Transmembran 63.7 8.1 0.00018 33.3 3.2 24 269-292 161-184 (319)
118 KOG1443 Predicted integral mem 61.1 96 0.0021 27.7 9.3 53 83-135 261-313 (349)
119 COG1742 Uncharacterized conser 60.5 65 0.0014 23.6 8.1 40 99-138 66-105 (109)
120 COG3169 Uncharacterized protei 58.3 15 0.00033 26.5 3.3 30 255-285 84-113 (116)
121 PF07857 DUF1632: CEO family ( 54.4 1.5E+02 0.0032 25.8 13.7 100 28-136 27-133 (254)
122 PF05977 MFS_3: Transmembrane 53.1 2.2E+02 0.0049 27.6 12.8 46 238-284 344-390 (524)
123 PF07444 Ycf66_N: Ycf66 protei 47.4 22 0.00048 25.0 2.7 23 267-289 5-27 (84)
124 PF05297 Herpes_LMP1: Herpesvi 45.8 6.8 0.00015 34.1 0.0 90 92-184 50-143 (381)
125 PF11044 TMEMspv1-c74-12: Plec 37.7 25 0.00054 21.3 1.5 16 267-282 2-17 (49)
126 KOG1583 UDP-N-acetylglucosamin 37.2 29 0.00064 30.4 2.5 55 239-294 90-144 (330)
127 KOG4831 Unnamed protein [Funct 36.7 51 0.0011 24.3 3.3 69 67-136 55-124 (125)
128 COG1742 Uncharacterized conser 36.5 24 0.00053 25.8 1.6 43 246-289 64-106 (109)
129 PF15102 TMEM154: TMEM154 prot 36.1 28 0.0006 27.3 2.0 22 272-293 66-87 (146)
130 COG4736 CcoQ Cbb3-type cytochr 34.6 47 0.001 21.7 2.6 24 272-295 15-38 (60)
131 COG2116 FocA Formate/nitrite f 33.6 3.3E+02 0.0071 23.8 9.4 23 115-137 58-80 (265)
132 COG4657 RnfA Predicted NADH:ub 32.7 2.1E+02 0.0046 22.9 6.3 62 106-167 86-154 (193)
133 PRK10666 ammonium transporter; 32.6 4.3E+02 0.0094 24.9 19.0 53 112-166 273-326 (428)
134 TIGR01167 LPXTG_anchor LPXTG-m 31.7 74 0.0016 17.6 2.9 18 267-284 10-27 (34)
135 PRK10644 arginine:agmatin anti 31.2 3.5E+02 0.0075 25.4 9.0 39 249-289 389-428 (445)
136 TIGR00905 2A0302 transporter, 30.4 4.7E+02 0.01 24.7 11.7 21 270-290 417-437 (473)
137 PRK10655 potE putrescine trans 30.4 3.6E+02 0.0077 25.2 9.0 23 270-292 409-431 (438)
138 PF06123 CreD: Inner membrane 30.1 4.8E+02 0.01 24.7 13.8 75 95-171 301-377 (430)
139 PF09930 DUF2162: Predicted tr 29.3 3.6E+02 0.0077 23.0 9.4 76 59-134 96-174 (224)
140 PF07123 PsbW: Photosystem II 28.9 64 0.0014 24.9 2.8 31 140-170 101-131 (138)
141 PF07168 Ureide_permease: Urei 28.0 75 0.0016 28.3 3.5 69 216-286 74-145 (336)
142 cd01324 cbb3_Oxidase_CcoQ Cyto 27.7 89 0.0019 19.4 2.9 22 273-294 17-38 (48)
143 PRK11357 frlA putative fructos 27.3 5.2E+02 0.011 24.2 13.2 20 272-291 418-437 (445)
144 PF06946 Phage_holin_5: Phage 27.0 2.4E+02 0.0053 20.3 6.4 57 234-290 24-83 (93)
145 PF05961 Chordopox_A13L: Chord 26.9 85 0.0018 21.0 2.8 22 270-291 5-26 (68)
146 KOG1442 GDP-fucose transporter 26.5 53 0.0012 28.8 2.3 107 27-133 214-323 (347)
147 PRK01637 hypothetical protein; 25.6 2.2E+02 0.0048 25.0 6.2 22 267-288 246-267 (286)
148 COG3086 RseC Positive regulato 24.2 1.1E+02 0.0023 24.0 3.4 30 236-265 70-104 (150)
149 TIGR02865 spore_II_E stage II 23.9 8E+02 0.017 25.2 14.4 43 93-135 12-54 (764)
150 PF09852 DUF2079: Predicted me 23.2 6.4E+02 0.014 23.8 11.6 29 24-52 55-83 (449)
151 KOG4812 Golgi-associated prote 22.4 2.9E+02 0.0063 23.7 5.8 69 215-286 161-238 (262)
152 PF13038 DUF3899: Domain of un 22.0 1.2E+02 0.0027 21.3 3.3 19 268-286 3-21 (92)
153 TIGR03810 arg_ornith_anti argi 21.7 6.9E+02 0.015 23.6 10.8 21 269-289 411-431 (468)
154 PRK12437 prolipoprotein diacyl 21.3 81 0.0018 27.6 2.6 21 267-287 235-255 (269)
155 PF10225 DUF2215: Uncharacteri 20.8 5.5E+02 0.012 22.1 10.2 32 234-265 115-146 (249)
156 PRK11715 inner membrane protei 20.2 7.5E+02 0.016 23.5 13.4 70 100-171 312-383 (436)
157 PF11023 DUF2614: Protein of u 20.1 1.3E+02 0.0029 22.4 3.0 54 114-167 5-67 (114)
158 PF05545 FixQ: Cbb3-type cytoc 20.1 1.8E+02 0.0038 17.9 3.3 18 274-291 17-34 (49)
159 PF08507 COPI_assoc: COPI asso 20.1 2.3E+02 0.0049 21.8 4.6 29 255-285 75-103 (136)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=6.6e-35 Score=260.37 Aligned_cols=269 Identities=23% Similarity=0.301 Sum_probs=219.3
Q ss_pred ccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchH
Q 021029 12 SKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISV 91 (318)
Q Consensus 12 ~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 91 (318)
-+||++++ ++++|..+++.|+.++.+.+.+. +..+. +++++.++++ ++..++.|++.+.++.+.|.+++|+++
T Consensus 19 ~~NK~~l~----~~~~P~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~s~ 91 (302)
T TIGR00817 19 IYNKKLLN----VFPYPYFKTLISLAVGSLYCLLS-WSSGL-PKRLKISSAL-LKLLLPVAIVHTIGHVTSNVSLSKVAV 91 (302)
T ss_pred HHHHHHHh----hCChhHHHHHHHHHHHHHHHHHH-HHhCC-CCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 46999999 67889999999999988776554 22222 2233456666 468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 021029 92 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRK 171 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~ 171 (318)
+.++++++++|+++++++++++|||++++++++++++++|+.+...++.+++..|++++++|+++||+|.++.||..+++
T Consensus 92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~ 171 (302)
T TIGR00817 92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK 171 (302)
T ss_pred HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999987766777778899999999999999999999987632
Q ss_pred CCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccccc--cc----ccc--cchHHhHHHH-HHHHHHHHHHHHHhhcchhh
Q 021029 172 GLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL--ET----WHF--PPLMLTLNCL-CTFALNLSVFLVISHTSALT 242 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~----~~~--~~~l~~~~~v-~~~~~~~~~~~~~~~~~a~~ 242 (318)
+.|+.+.+.|+...+++.+.|.....|.+..... .. +.. .+...+..+. +....|...+.++++++|.+
T Consensus 172 --~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t 249 (302)
T TIGR00817 172 --SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLT 249 (302)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence 4689999999999998888777665554322110 01 111 1122333333 34445566778899999999
Q ss_pred hhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 243 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 243 ~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
+++.++++|++++++|++++||+ +|..+++|+++++.|+.+|++.|+
T Consensus 250 ~sv~~~l~pv~~~~~~~~~lge~-lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 250 HSVGNCMKRVVVIVVSILFFGTK-ISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHhhhhhhheeeeehhhcCCC-CchhHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999 999999999999999999997654
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.9e-34 Score=261.28 Aligned_cols=271 Identities=19% Similarity=0.298 Sum_probs=226.6
Q ss_pred cccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCC-HHHHHHHHhHHHHHHHHHHHHhhhhhccc
Q 021029 11 SSKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMT-LEIYTTSVIPIGAMFAMTLWLGNTAYLYI 89 (318)
Q Consensus 11 s~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~ 89 (318)
..+||++++ .+|+|++++++|++++.+++..++ ..+..+ +++.+ ++.+++.+++.|+++...+...+.|++++
T Consensus 65 ~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~ 138 (350)
T PTZ00343 65 VVDNKLALN----MLPLPWTISSLQLFVGWLFALLYW-ATGFRK-IPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLG 138 (350)
T ss_pred HHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHH-HhCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 567999999 688999999999999988765553 233222 23343 55567899999999887787788999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021029 90 SVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVK 169 (318)
Q Consensus 90 ~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~ 169 (318)
+++.++++++++|+++++++++++|||++++++++++++++|+.+...+|.++++.|++++++|++++|+++++.||..+
T Consensus 139 svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~ 218 (350)
T PTZ00343 139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMK 218 (350)
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999888888899999999999999999999999987
Q ss_pred hcC---CCCChHHHHHHhhHHHHHHHHHHHHHhcCccccc--------cccc--cccchHHhHHHHHHHHHHHHHHHHHh
Q 021029 170 RKG---LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA--------LETW--HFPPLMLTLNCLCTFALNLSVFLVIS 236 (318)
Q Consensus 170 ~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~--~~~~~l~~~~~v~~~~~~~~~~~~~~ 236 (318)
+++ .+.++.....++.++++++++|.....|.+.... ...+ ......++.+++..+++|...+.+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~ 298 (350)
T PTZ00343 219 NKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLG 298 (350)
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 543 1356777777778888888877766566432111 0111 11224567778888888988999999
Q ss_pred hcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 237 HTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 237 ~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
+++|.++++.+++||++++++|++++||+ +|+.+++|.++++.|+++|++.
T Consensus 299 ~~s~~t~sv~~~lk~V~~iv~s~l~~ge~-lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 299 KVNQVTHAVANTLKRVVIIVSSIIIFQTQ-VTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred ccchhHHHHHHHHHHHHHhhhhHHHhCCC-CchHhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999 9999999999999999999875
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=252.03 Aligned_cols=280 Identities=36% Similarity=0.584 Sum_probs=242.0
Q ss_pred cccccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhcc
Q 021029 9 PSSSKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLY 88 (318)
Q Consensus 9 ~~s~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~ 88 (318)
....+||++++ .++|++|.+++..++..+.+..... +..+..+. .+.+.+.+++.+++.++.+.+++++.|.|+++
T Consensus 31 ~~~~~nK~il~--~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~~-~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~ 106 (316)
T KOG1441|consen 31 GVIILNKYILS--KYGFPFPITLTMLHLFCGALALLVI-KVLKLVPP-SKISSKLPLRTLLPLGLVFCISHVLGNVSLSY 106 (316)
T ss_pred eeEEeeHhhhc--cCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCC-CccccccchHHHHHHHHHHHHHHHhcchhhhc
Confidence 34567999999 5899999999999888776665544 44454443 34445667889999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021029 89 ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILV 168 (318)
Q Consensus 89 ~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~ 168 (318)
+++++++++|++.|+++.++++++.+|+.++..++++.....|+.+++.+|.++|+.|.+.++++.+..++++++.|+.+
T Consensus 107 v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll 186 (316)
T KOG1441|consen 107 VPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLL 186 (316)
T ss_pred cchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCChHHHHHHhhHHHHHHHHHHHH-HhcCccc--cccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhh
Q 021029 169 KRKGLKLNPISVMYYVSPCSALCLFIPWI-FLEKPKM--DALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRV 245 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~ 245 (318)
++++.++|+.+.+.|+++++...+++|.. ..|++.. .....|+.......+..++++.+|...|.+++++||+++++
T Consensus 187 ~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V 266 (316)
T KOG1441|consen 187 TSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSV 266 (316)
T ss_pred hccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhh
Confidence 86667899999999999999999985544 3344332 02234444444455555999999999999999999999999
Q ss_pred hhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccchh
Q 021029 246 AGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKE 293 (318)
Q Consensus 246 ~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~~ 293 (318)
.+.+|.++.+..|+++|+|+ .|+.+..|.++.++|+.+|++.|.+++
T Consensus 267 ~g~~K~~~vi~~s~~iF~~p-vt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 267 AGHMKRIVVIVVSWLIFGNP-VTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred hccceEEEEEEeEeeeecCC-CchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999998 999999999999999999998876543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=8.5e-31 Score=236.64 Aligned_cols=272 Identities=14% Similarity=0.134 Sum_probs=206.0
Q ss_pred ccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchH
Q 021029 12 SKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISV 91 (318)
Q Consensus 12 ~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 91 (318)
...|..++ .+.+ |..+.++|+.+++++++++.+.+++.+++++.+++++. .+...+++....+.+.+.+++|+++
T Consensus 30 ~~~k~a~~---~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~-~l~l~g~~g~~~~~~~~~gl~~tsa 104 (358)
T PLN00411 30 TLFKVATS---KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILS-KIGLLGFLGSMYVITGYIGIEYSNP 104 (358)
T ss_pred HHHHHHHH---CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHH-HHHHHHHHHHHHHHHHHHHHhhccH
Confidence 34577777 4666 99999999999999998887654432323334466543 4555665555566789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH------cccccchhHHHHHHHHhhhhhheecC-cc-----------------------c
Q 021029 92 AFAQMLKAIMPVAVFILGVAA------GLEVMSCRMLLIMSVISFGVVVASYG-EI-----------------------N 141 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~------l~ek~~~~~~~~i~l~~~Gv~~~~~~-~~-----------------------~ 141 (318)
+.++++.++.|++++++++++ +|||.++++++|+++++.|+.++... +. .
T Consensus 105 ~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (358)
T PLN00411 105 TLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSN 184 (358)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCc
Confidence 999999999999999999999 69999999999999999999975531 10 1
Q ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccc-cccccccchHHhH
Q 021029 142 IN-WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA-LETWHFPPLMLTL 219 (318)
Q Consensus 142 ~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 219 (318)
.+ ..|+++.+.|+++||+|++++|+..++.+ +.....+++..++.+...++....|...... ...+......++.
T Consensus 185 ~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~---~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y 261 (358)
T PLN00411 185 SDWLIGGALLTIQGIFVSVSFILQAHIMSEYP---AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVT 261 (358)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHH
Confidence 12 45999999999999999999999887542 3345566776666666666655555422211 1112222222444
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccch
Q 021029 220 NCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 220 ~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
.++.+.+.+..+++++++.+|..++++.+++|++++++|++++||+ +++.+++|+++++.|+++.++.++|+
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~-lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS-LYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4455555566677899999999999999999999999999999999 99999999999999999988765544
No 5
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=3.7e-27 Score=208.79 Aligned_cols=269 Identities=16% Similarity=0.189 Sum_probs=210.5
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAF 93 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 93 (318)
++.+-+ .+.+.|...++.-+..-.++-.+....++..++..+..++++ ++.+..+++...++++.+.|++|++++.
T Consensus 32 s~~l~~---~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~-w~y~lla~~Dv~aN~~~v~a~~yTsvtS 107 (334)
T PF06027_consen 32 SSLLAN---KGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPW-WKYFLLALLDVEANYLVVLAYQYTSVTS 107 (334)
T ss_pred HHHHHh---cCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhH-HHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence 444444 256678887777776544444333332222221112223443 4677789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcc---------cchHHHHHHHHHHHHHHHHHHHHH
Q 021029 94 AQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI---------NINWIGVVYQMGGVVGEALRLIFM 164 (318)
Q Consensus 94 ~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~~ 164 (318)
++++.+++.+++++++++++|+|+++.+++|++++++|+.++...|. +....|++++++|+++||+++|+.
T Consensus 108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~ 187 (334)
T PF06027_consen 108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE 187 (334)
T ss_pred HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998776541 234799999999999999999999
Q ss_pred HHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccccccccccc-chHHhHHHHHHHHHHHHHHHHHhhcchhhh
Q 021029 165 EILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFP-PLMLTLNCLCTFALNLSVFLVISHTSALTI 243 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~ 243 (318)
|+..++. +..+.+.+.++++.++..+....+|....... .|+.. ..+.+..+++.+..+...-..++..+|+..
T Consensus 188 E~~v~~~----~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~-~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~ 262 (334)
T PF06027_consen 188 EKLVKKA----PRVEFLGMLGLFGFIISGIQLAILERSGIESI-HWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFF 262 (334)
T ss_pred HHhcccC----CHHHHHHHHHHHHHHHHHHHHHheehhhhhcc-CCChhhHHHHHHHHHHHHHHHHHHHHHHHhCcccee
Confidence 9998853 77888999999999988877777776655433 23332 234444555556666666667899999999
Q ss_pred hhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccch
Q 021029 244 RVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 244 s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
++-.....+.++++++++||++ +++..++|.++++.|...|+..+.+.
T Consensus 263 nLsLLTsd~~ali~~i~~f~~~-~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 263 NLSLLTSDFYALIIDIFFFGYK-FSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred ehHHHHhhHHHHHHHHHhcCcc-ccHHHHHHHHHHHHHhheEEccCCcc
Confidence 9988899999999999999999 99999999999999999999776543
No 6
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=2.2e-26 Score=204.32 Aligned_cols=258 Identities=14% Similarity=0.081 Sum_probs=192.2
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHH-HHHHHHHhhhhh-ccchH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAM-FAMTLWLGNTAY-LYISV 91 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al-~~~~~ 91 (318)
.|...+ +.+ |..++++|+.+++++++++...+++ + +.+++++. .....|.+ ......+.+.+. +++++
T Consensus 27 ~K~~~~----~~~-p~~~~~~R~~~a~l~ll~~~~~~~~-~---~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~a 96 (292)
T PRK11272 27 IRIGVE----SWP-PLMMAGVRFLIAGILLLAFLLLRGH-P---LPTLRQWL-NAALIGLLLLAVGNGMVTVAEHQNVPS 96 (292)
T ss_pred HHHHhc----cCC-HHHHHHHHHHHHHHHHHHHHHHhCC-C---CCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence 677766 677 9999999999999888777554322 1 12345543 44455544 456677888888 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC-cccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021029 92 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG-EININWIGVVYQMGGVVGEALRLIFMEILVKR 170 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~ 170 (318)
+.++++.++.|+++.+++.+ +|||++++++++++++++|+.+...+ +.+.+..|++++++++++||.+.++.||..++
T Consensus 97 ~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~ 175 (292)
T PRK11272 97 GIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP 175 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999986 69999999999999999999987643 33455689999999999999999999997542
Q ss_pred cCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhh
Q 021029 171 KGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVK 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~ 250 (318)
++.....++...+++.+.+.....+.+.... .+......++..+.+.+...+...+.++++.++.+.+...+++
T Consensus 176 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~ 249 (292)
T PRK11272 176 -----VGMMAGAAEMLAAGVVLLIASLLSGERLTAL-PTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVN 249 (292)
T ss_pred -----cchHHHHHHHHHHHHHHHHHHHHcCCccccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 3344556776677666655544333221111 1111111222233333334455667789999999999999999
Q ss_pred hHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 251 DWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 251 ~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
|+++.+++++++||+ ++..+++|+++++.|++..+..+
T Consensus 250 Pi~a~i~~~~~l~E~-~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 250 PVVAVLLGTGLGGET-LSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHcCCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999877543
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=2.1e-26 Score=205.40 Aligned_cols=270 Identities=24% Similarity=0.360 Sum_probs=217.7
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAF 93 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 93 (318)
++.+.+++ .+.++|..+++.|++...+...+.....+ .+.+ ++..+++.++.++++.++..+.|.|++|+|.++
T Consensus 19 qE~i~~~~-~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 19 QEKIMTTP-YGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKS----RKIPLKKYAILSFLFFLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHcCC-CCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCC----CcChHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 45555532 22257999999999999888776655444 1112 233356778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCccc----c------hHHHHHHHHHHHHHHHHHHHH
Q 021029 94 AQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN----I------NWIGVVYQMGGVVGEALRLIF 163 (318)
Q Consensus 94 ~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~----~------~~~G~~~~l~s~~~~a~~~v~ 163 (318)
.+++|++.|+++++++++++|||++.++++++++.++|+++....|.+ . +..|+++.+++.+++|++.++
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~ 172 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY 172 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998764421 1 124999999999999999999
Q ss_pred HHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhc---Ccccccc-ccccccchHHhHHHHHHHHHHHHHHHHHhhcc
Q 021029 164 MEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE---KPKMDAL-ETWHFPPLMLTLNCLCTFALNLSVFLVISHTS 239 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~ 239 (318)
+||..+++ +.++++.++|...++.+..++.....+ ....... ...+..+..+...++.++..+...+..+++.+
T Consensus 173 qe~~~~~~--~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~ 250 (303)
T PF08449_consen 173 QEKLFKKY--GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFS 250 (303)
T ss_pred HHHHHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999865 568999999999999888877766522 1111111 11112334566677777777777888899999
Q ss_pred hhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccch
Q 021029 240 ALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 240 a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
|.+.++...++.+.++++++++||++ +++.||+|.++++.|..+|++.++|+
T Consensus 251 al~~t~v~t~Rk~~sillS~~~f~~~-~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 251 ALTTTIVTTLRKFLSILLSVIIFGHP-LSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcCCc-CChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999 99999999999999999999887654
No 8
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=4.7e-26 Score=202.88 Aligned_cols=258 Identities=14% Similarity=0.154 Sum_probs=183.2
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHH-HHHHHHhhhhhcc-chH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMF-AMTLWLGNTAYLY-ISV 91 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~-~~~ 91 (318)
.|..++ +++ |..+.++|+.++++.++++.+ + . +.+++ ..+..++.. .....+.+.+++| .++
T Consensus 23 ~k~~~~----~~~-p~~~~~~R~~~a~~~l~~~~~--~-~----~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~a 86 (299)
T PRK11453 23 IKVGLH----NMP-PLMLAGLRFMLVAFPAIFFVA--R-P----KVPLN----LLLGYGLTISFGQFAFLFCAINFGMPA 86 (299)
T ss_pred HHHHHh----cCC-HHHHHHHHHHHHHHHHHHHhc--C-C----CCchH----HHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 677777 687 999999999998766554421 1 1 11222 233344433 3344566788887 688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc---ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021029 92 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---ININWIGVVYQMGGVVGEALRLIFMEILV 168 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~ 168 (318)
+.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++ .+.+..|+++++.++++||.+.++.||..
T Consensus 87 ~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~ 166 (299)
T PRK11453 87 GLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIM 166 (299)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999876532 22345799999999999999999999986
Q ss_pred hhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccc----ccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhh
Q 021029 169 KRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD----ALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIR 244 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s 244 (318)
++.+ ..+......+....+.+.........|.+... ...++.....++..+.+.+...+..++..+++.+|.+.+
T Consensus 167 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s 245 (299)
T PRK11453 167 SHST-RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVA 245 (299)
T ss_pred cccC-ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 5422 12233334455444433333222333432211 011111122233333344444455567789999999999
Q ss_pred hhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 245 VAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 245 ~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
...+++|+++.+++++++||+ ++..+++|+++++.|+....+.+
T Consensus 246 ~~~~l~Pv~a~~~~~l~lgE~-~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 246 PLSLLVPVVGLASAALLLDER-LTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999999 99999999999999998876654
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=6e-26 Score=201.75 Aligned_cols=252 Identities=14% Similarity=0.063 Sum_probs=184.7
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhc----cc
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYL----YI 89 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~----~~ 89 (318)
.|...+ .++ |..+.++|+.++.+++.++. ++.+ . +++..+..+..++.+..+..+.+.+++ +.
T Consensus 23 ~k~~~~----~~~-P~~~~~~R~~~a~l~l~~~~---~~~~-~----~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~ 89 (295)
T PRK11689 23 IRGVSE----SLG-PVGGAAMIYSVSGLLLLLTV---GFPR-L----RQFPKRYLLAGGLLFVSYEICLALSLGYANTRR 89 (295)
T ss_pred HHHHHc----cCC-hHHHHHHHHHHHHHHHHHHc---cccc-c----ccccHHHHHHHhHHHHHHHHHHHHHHHHhhccc
Confidence 788888 788 99999999999988876542 1111 1 111123344455566667777777775 46
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcc-----------cchHHHHHHHHHHHHHHH
Q 021029 90 SVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI-----------NINWIGVVYQMGGVVGEA 158 (318)
Q Consensus 90 ~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~-----------~~~~~G~~~~l~s~~~~a 158 (318)
+++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++. ..+..|++++++++++||
T Consensus 90 ~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A 169 (295)
T PRK11689 90 QAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWA 169 (295)
T ss_pred cchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999999998765432 123569999999999999
Q ss_pred HHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhc
Q 021029 159 LRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHT 238 (318)
Q Consensus 159 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~ 238 (318)
.|+++.||..++ .++..... ..+...+.++... +.... ....+. .+..+...++.+...+..+++++++.
T Consensus 170 ~~~v~~k~~~~~----~~~~~~~~---~~~~~~l~~~~~~-~~~~~-~~~~~~-~~~~l~~~~~~t~~~~~l~~~al~~~ 239 (295)
T PRK11689 170 AYCNVTRKYARG----KNGITLFF---ILTALALWIKYFL-SPQPA-MVFSLP-AIIKLLLAAAAMGFGYAAWNVGILHG 239 (295)
T ss_pred HHHHHHhhccCC----CCchhHHH---HHHHHHHHHHHHH-hcCcc-ccCCHH-HHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999998653 34544322 2223333333332 22111 111121 12223344455656677788899999
Q ss_pred chhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 239 SALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 239 ~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
+|.+.+...+++|+++++++++++||+ +++.+++|+++++.|+......+
T Consensus 240 ~a~~~s~~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 240 NMTLLATASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhhhH
Confidence 999999999999999999999999999 99999999999999998876543
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=1.5e-25 Score=195.98 Aligned_cols=251 Identities=19% Similarity=0.146 Sum_probs=192.0
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAF 93 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 93 (318)
.|+.++ ...+ |..+.+.|++.+.+++.++.+. + .+++++.+.....+++..+++.+.+.|++|++++.
T Consensus 8 ~k~~~~---~~~~-~~~~~~~r~~~~~l~l~~~~~~-~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~ 75 (260)
T TIGR00950 8 IGQYLE---GQVP-LYFAVFRRLIFALLLLLPLLRR-R-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE 75 (260)
T ss_pred HHHHHh---cCCC-HHHHHHHHHHHHHHHHHHHHHh-c-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 688777 1345 8999999999888877665432 2 12444444555556678889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 021029 94 AQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-ININWIGVVYQMGGVVGEALRLIFMEILVKRKG 172 (318)
Q Consensus 94 ~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~ 172 (318)
++++.++.|+++++++.+++|||++++++.++.++++|+.+...++ .+.+..|+++++.++++|+.+.++.|+..++.
T Consensus 76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~- 154 (260)
T TIGR00950 76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKE- 154 (260)
T ss_pred hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-
Confidence 9999999999999999999999999999999999999999875443 44567899999999999999999999987642
Q ss_pred CCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhH
Q 021029 173 LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDW 252 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v 252 (318)
+.++.....+...++.+++.+.....+..... +......++..+.+.+...+...+.++++.++.+.+...+++|+
T Consensus 155 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv 230 (260)
T TIGR00950 155 -GPELLQFTGWVLLLGALLLLPFAWFLGPNPQA---LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPL 230 (260)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 22344444456666766665554443322111 11111123333334444556667788999999999999999999
Q ss_pred HHhhhhHhhcCCcccchhHHHHHHHHHHHH
Q 021029 253 VVVLFSALLFADTKLTIINLFGYGIAIAGV 282 (318)
Q Consensus 253 ~~~l~~~~~~~e~~~s~~~~~G~~lii~g~ 282 (318)
++.+++++++||+ ++..+++|..+++.|+
T Consensus 231 ~~~ll~~~~~~E~-~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 231 VALLLGLLILGET-LSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHhCCC-CCHHHHHHHHHHHHhc
Confidence 9999999999999 9999999999999986
No 11
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=9.3e-26 Score=200.63 Aligned_cols=253 Identities=11% Similarity=0.064 Sum_probs=183.3
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhcccc-CC-CCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHH
Q 021029 24 NFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKV-ED-GMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIM 101 (318)
Q Consensus 24 ~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~ 101 (318)
+.+ |..++++|++++.+++.++...+++.+. +. ..++++. ...+..+++.+.++.++++|+++++++.++++.++.
T Consensus 32 ~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~ 109 (296)
T PRK15430 32 YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFIN 109 (296)
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 577 9999999999998877766544332111 00 1123332 223455677788899999999999999999999999
Q ss_pred HHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHH
Q 021029 102 PVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVM 181 (318)
Q Consensus 102 pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~ 181 (318)
|+++.+++++++|||+++++|+++++++.|+.++..++.+.. .++++++++||+|.++.|+..++. ..+.....
T Consensus 110 Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~~~--~~~~~~~~ 183 (296)
T PRK15430 110 PLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKIAVEA--QTGMLIET 183 (296)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhcCCCC--chhHHHHH
Confidence 999999999999999999999999999999998764333322 467889999999999999975421 12333444
Q ss_pred HHhhHHHHHHHHHHHHHhcCccc-cccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHh
Q 021029 182 YYVSPCSALCLFIPWIFLEKPKM-DALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSAL 260 (318)
Q Consensus 182 ~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~ 260 (318)
.+..+.+.....+. .+.+.. .....+ ..+..++..++.+...+.+.+.++++.+|...+...+++|++++++|++
T Consensus 184 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l 259 (296)
T PRK15430 184 MWLLPVAAIYLFAI---ADSSTSHMGQNPM-SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVT 259 (296)
T ss_pred HHHHHHHHHHHHHH---ccCCcccccCCcH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443332111 111111 011111 1123344455556666778888999999999999999999999999999
Q ss_pred hcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 261 LFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 261 ~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
++||+ +++.+++|+++++.|+.......
T Consensus 260 ~l~E~-~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 260 FYGEK-PGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHcCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999887776543
No 12
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.95 E-value=1.4e-26 Score=195.39 Aligned_cols=272 Identities=23% Similarity=0.399 Sum_probs=234.8
Q ss_pred hhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHH
Q 021029 15 QWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVM--KVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVA 92 (318)
Q Consensus 15 K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 92 (318)
+|.+++...+|++|+.++.+|+++-.++.....+..+.. +.+.+++|++++|++.|.++..+....+.|++++|++.+
T Consensus 32 tf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlS 111 (349)
T KOG1443|consen 32 TFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLS 111 (349)
T ss_pred HHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeee
Confidence 334443344899999999999998877766554433322 224578899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 021029 93 FAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKG 172 (318)
Q Consensus 93 ~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~ 172 (318)
.+++.|+++++|+.+++.++.-||+++.-.+.++++..|+.+.++++.+++..|..+..+++++.++.+.+.+..+++.+
T Consensus 112 lYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~ 191 (349)
T KOG1443|consen 112 LYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQP 191 (349)
T ss_pred eeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred -CCCChHHHHHHhhHHHHHHHHHHHHHhcCccccc-cccc--------cccchHHhHHHHHHHHHHHHHHHHHhhcchhh
Q 021029 173 -LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA-LETW--------HFPPLMLTLNCLCTFALNLSVFLVISHTSALT 242 (318)
Q Consensus 173 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~--------~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~ 242 (318)
..-+|...++..++...+.+++....+|++.... ...+ ......+.++|..++..-...+..+.+++..+
T Consensus 192 ~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~lt 271 (349)
T KOG1443|consen 192 SAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLT 271 (349)
T ss_pred cccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeecccee
Confidence 3448899999999988888888888889865431 1111 11235578889999999888999999999999
Q ss_pred hhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 243 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 243 ~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
.++.+..|.+...+++..+.+|. ++..+|+|..++..|+..+..
T Consensus 272 lSIaGI~Kel~tl~la~ii~~d~-ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 272 LSIAGIVKEVCTLLLAIIILKDQ-LSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred eeHHHHHHHHHHHHHHHHHhhcc-hhhhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999 999999999999999999944
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=3.9e-25 Score=196.38 Aligned_cols=257 Identities=14% Similarity=0.120 Sum_probs=188.5
Q ss_pred cccccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhcc
Q 021029 9 PSSSKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLY 88 (318)
Q Consensus 9 ~~s~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~ 88 (318)
+.++..|++++ .++ |..+.++|+++++++++++.+..+ .+.+++++ +..+..+++.+..+.+.+++++|
T Consensus 26 ~~~~~~K~~~~----~~~-~~~~~~~R~~~a~l~l~~~~~~~~-----~~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~ 94 (293)
T PRK10532 26 SGASLAKSLFP----LVG-APGVTALRLALGTLILIAIFKPWR-----LRFAKEQR-LPLLFYGVSLGGMNYLFYLSIQT 94 (293)
T ss_pred hhHHHHHHHHH----HcC-HHHHHHHHHHHHHHHHHHHHhHHh-----ccCCHHHH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 34667899998 687 999999999999988876643211 12335554 45666777778888889999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC---cccchHHHHHHHHHHHHHHHHHHHHHH
Q 021029 89 ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG---EININWIGVVYQMGGVVGEALRLIFME 165 (318)
Q Consensus 89 ~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~---~~~~~~~G~~~~l~s~~~~a~~~v~~~ 165 (318)
++++.+.++..+.|+++.+++ +||++.. .++.+++.|+.++... ..+.+..|++++++++++||.|.++.|
T Consensus 95 ~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r 168 (293)
T PRK10532 95 VPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQ 168 (293)
T ss_pred ccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887 3555544 4566778998876532 223456899999999999999999999
Q ss_pred HHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhh
Q 021029 166 ILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRV 245 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~ 245 (318)
|..++ .++... .+....+++.+.+.....+. .. ..++.....++..+.+.+.+.+..++.++++.+|.+++.
T Consensus 169 ~~~~~----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 169 RAGAE----HGPATV-AIGSLIAALIFVPIGALQAG-EA--LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred HHhcc----CCchHH-HHHHHHHHHHHHHHHHHccC-cc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 98653 245554 45556666555544433222 11 111111112233333444444556778899999999999
Q ss_pred hhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccc
Q 021029 246 AGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 246 ~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~ 291 (318)
..+++|+++.++|++++||+ +++.+++|++++++|++.+....+|
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999 9999999999999999999766533
No 14
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.3e-24 Score=186.01 Aligned_cols=278 Identities=19% Similarity=0.311 Sum_probs=229.1
Q ss_pred ccccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccc
Q 021029 10 SSSKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYI 89 (318)
Q Consensus 10 ~s~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~ 89 (318)
+...||++++ .++|+..+.+..+|.+.+.+.+.. .+..|..+. ++++++.. |+.+|.++++.++..+.-.+++|+
T Consensus 27 m~vvNK~vls--~y~f~~~l~l~~~Q~l~s~~~v~~-lk~~~lv~~-~~l~~~~~-kk~~P~~~lf~~~i~t~~~slk~l 101 (314)
T KOG1444|consen 27 MTVVNKIVLS--SYNFPMGLLLMLLQSLASVLVVLV-LKRLGLVNF-RPLDLRTA-KKWFPVSLLFVGMLFTGSKSLKYL 101 (314)
T ss_pred HHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHH-HHHhceeec-CCcChHHH-HHHccHHHHHHHHHHHcccccccc
Confidence 3445999999 666665556666999987776654 344555443 36778774 789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021029 90 SVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVK 169 (318)
Q Consensus 90 ~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~ 169 (318)
+++.++++|..+|+++++.+..++|.|++...|.++..+.+|......+|.+++..|+.|++...++.+.+.++.||..+
T Consensus 102 nVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd 181 (314)
T KOG1444|consen 102 NVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVD 181 (314)
T ss_pred CchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcc-cc-cccccc--ccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhh
Q 021029 170 RKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK-MD-ALETWH--FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRV 245 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~--~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~ 245 (318)
.. +.+.+.+++|..+.+...+.+...+.+... .. +.+.|. ..+..+.++++++++.+++.+++.+..|+++.++
T Consensus 182 ~~--~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~ti 259 (314)
T KOG1444|consen 182 SA--NLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTI 259 (314)
T ss_pred cc--cccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceee
Confidence 55 568899999999998887766665544322 11 111122 2235688999999999999999999999999999
Q ss_pred hhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccchhhh
Q 021029 246 AGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEAS 295 (318)
Q Consensus 246 ~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~~~~ 295 (318)
++........+.+.+++|++ .++..++|..+.+.|...|++.+.++++.
T Consensus 260 vG~~n~l~t~l~~ll~~d~~-~~~~n~~gll~~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 260 VGAKNKLLTYLGGLLFGDKP-FTFLNVIGLLVGFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred hhhhhhHHHHHHHHhcCCce-echhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence 99555555566666666777 99999999999999999999887554433
No 15
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.8e-25 Score=183.79 Aligned_cols=281 Identities=18% Similarity=0.187 Sum_probs=230.9
Q ss_pred cccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccC-----CCCCHHHHHHHHhHHHHHHHHHHHHhhhh
Q 021029 11 SSKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVE-----DGMTLEIYTTSVIPIGAMFAMTLWLGNTA 85 (318)
Q Consensus 11 s~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 85 (318)
...||++++..+...+.|..+++.|+++...+++.+.+..++.+.. .+++.+ -.|+.++.++.+.++..+.|.+
T Consensus 44 vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~-t~r~vlplsvVfi~mI~fnnlc 122 (347)
T KOG1442|consen 44 VFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLA-TARQVLPLSVVFILMISFNNLC 122 (347)
T ss_pred hhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHH-HHHhhcchhheeeeehhcccee
Confidence 3459999997777788899999999999999998876655443221 123333 3578999999999999999999
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc---ccchHHHHHHHHHHHHHHHHHHH
Q 021029 86 YLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---ININWIGVVYQMGGVVGEALRLI 162 (318)
Q Consensus 86 l~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~---~~~~~~G~~~~l~s~~~~a~~~v 162 (318)
++|++++++++-++++.+|+++++++++|+|-+.....++.++++|-.+-...+ ...++.|.+++..|+++-|+..+
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnai 202 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAI 202 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988776655 45678999999999999999999
Q ss_pred HHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhc-Ccccccc-cccc-ccchHHhHHHHHHHHHHHHHHHHHhhcc
Q 021029 163 FMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE-KPKMDAL-ETWH-FPPLMLTLNCLCTFALNLSVFLVISHTS 239 (318)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~-~~~~l~~~~~v~~~~~~~~~~~~~~~~~ 239 (318)
+.||..... .-.-|.+..|+...+.+..+|...+.. ....... +.+. ..|.+..++|+++|.+++...+-+|.+|
T Consensus 203 ytkk~l~~v--~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TS 280 (347)
T KOG1442|consen 203 YTKKVLPPV--GDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTS 280 (347)
T ss_pred hhheecccc--cCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecc
Confidence 999876532 346678888888887776655544432 2222221 1222 2346789999999999999888999999
Q ss_pred hhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccchhhh
Q 021029 240 ALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEAS 295 (318)
Q Consensus 240 a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~~~~ 295 (318)
|.++.+.+..|...+.++++.+++|. -+..-|-|-.++++|...|++.|+++.++
T Consensus 281 plThnISgTAka~aQTvlAv~~y~E~-ks~lwwtsn~~vLvgs~~YT~vk~~em~~ 335 (347)
T KOG1442|consen 281 PLTHNISGTAKAAAQTVLAVAYYSET-KSGLWWTSNIVVLVGSLAYTLVKEHEMRK 335 (347)
T ss_pred cceeeecHhHHHHHHHHHHHHHHHHH-hhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence 99999999999999999999999999 99999999999999999999887654443
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.90 E-value=5.8e-22 Score=175.08 Aligned_cols=250 Identities=12% Similarity=0.038 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHH
Q 021029 31 LTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGV 110 (318)
Q Consensus 31 l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~ 110 (318)
..++++..+.+++.++...+.. +.+.+.+++++++..+..+......+.+.+.++++.+++.++.+.++.|+++.++++
T Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~ 108 (281)
T TIGR03340 30 FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWAT 108 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHH
Confidence 3577777776676666543211 111122233334455566677888899999999999999999999999999999999
Q ss_pred HHcccccchhHHHHHHHHhhhhhheecCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHH
Q 021029 111 AAGLEVMSCRMLLIMSVISFGVVVASYGE-ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSA 189 (318)
Q Consensus 111 ~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (318)
+++|||++.++|+|+.+++.|+.++..++ .+.+..|+.++++++++|+.|.+..|+..++.+...+......+......
T Consensus 109 ~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~ 188 (281)
T TIGR03340 109 LTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMG 188 (281)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHH
Confidence 99999999999999999999999776543 23455788899999999999999988764322101122222222222221
Q ss_pred HHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccch
Q 021029 190 LCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTI 269 (318)
Q Consensus 190 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~ 269 (318)
..+.+.....+...... .. ...+..+..+++.+...+...+.++++.++.+.+...+++|+++.++|++++||+ ++.
T Consensus 189 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~-~~~ 265 (281)
T TIGR03340 189 WPFLLLYLKRHGRSMFP-YA-RQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNER-WYL 265 (281)
T ss_pred HHHHHHHHHHhccchhh-hH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCC-ccH
Confidence 11112111111111100 11 1122445566666666677788899999999999999999999999999999999 999
Q ss_pred hHHHHHHHHHHHHHH
Q 021029 270 INLFGYGIAIAGVAA 284 (318)
Q Consensus 270 ~~~~G~~lii~g~~~ 284 (318)
.+++|+++++.|+.+
T Consensus 266 ~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 266 TRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHhHHh
Confidence 999999999999875
No 17
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.88 E-value=8.2e-21 Score=165.58 Aligned_cols=226 Identities=12% Similarity=0.043 Sum_probs=155.0
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhccc---cC-CCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHH
Q 021029 24 NFPFPLGLTLLHMVFSSVLCFLLTKVFKVMK---VE-DGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKA 99 (318)
Q Consensus 24 ~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~ 99 (318)
+.+ |..++++|++++.+++.++...+++.+ ++ ++.++++........+++.+.++.+++.|+++++++.++++.+
T Consensus 26 ~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~ 104 (256)
T TIGR00688 26 PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYL 104 (256)
T ss_pred cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 477 999999999999888766553333211 01 1111222223455667778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHH
Q 021029 100 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPIS 179 (318)
Q Consensus 100 ~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~ 179 (318)
+.|+++++++++++|||++++++++++++++|+.++..++.+.+ .++++++++||.|.+..|+..++ +..+
T Consensus 105 ~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~-----~~~~ 175 (256)
T TIGR00688 105 INPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT-----DLAG 175 (256)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC-----Ccch
Confidence 99999999999999999999999999999999997754333222 35788999999999999997542 2222
Q ss_pred HHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhH
Q 021029 180 VMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSA 259 (318)
Q Consensus 180 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~ 259 (318)
..... ........+.....+....... .....+..++..++.+...+.....++++.+|.+.+...+++|+++++++.
T Consensus 176 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~ 253 (256)
T TIGR00688 176 FCLET-LSLMPVAIYYLLQTDFATVQQT-NPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVS 253 (256)
T ss_pred HHHHH-HHHHHHHHHHHHHhccCccccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 22111 1111111111111111111111 111123334444556666777888899999999999999999999999987
Q ss_pred hh
Q 021029 260 LL 261 (318)
Q Consensus 260 ~~ 261 (318)
++
T Consensus 254 ~~ 255 (256)
T TIGR00688 254 FL 255 (256)
T ss_pred Hh
Confidence 64
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.86 E-value=7e-19 Score=155.77 Aligned_cols=247 Identities=17% Similarity=0.165 Sum_probs=179.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHH
Q 021029 28 PLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFI 107 (318)
Q Consensus 28 p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l 107 (318)
+....+.|...+.+...+... .++.+.+ +. .+++.+..+..++.......+++.++++++++.++.+.++.|+++.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~ 112 (292)
T COG0697 36 FLFAAALRFLIAALLLLPLLL-LEPRGLR-PA-LRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTAL 112 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-hhccccc-cc-ccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 566667799988777333322 1111111 11 11123345666677888889999999999999999999999999999
Q ss_pred HHH-HHcccccchhHHHHHHHHhhhhhheecCcccc---hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHH-
Q 021029 108 LGV-AAGLEVMSCRMLLIMSVISFGVVVASYGEINI---NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMY- 182 (318)
Q Consensus 108 ~~~-~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~---~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~- 182 (318)
++. +++|||++++++.++.+.+.|+.++..++... +..|+.+++.+++++|++.++.|+.. + .++.....
T Consensus 113 ~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~----~~~~~~~~~ 187 (292)
T COG0697 113 LAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R----LGPVTLALL 187 (292)
T ss_pred HHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C----CChHHHHHH
Confidence 997 77799999999999999999999998866543 35899999999999999999999986 2 24444444
Q ss_pred HhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHH-HHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhh
Q 021029 183 YVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF-ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALL 261 (318)
Q Consensus 183 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~-~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~ 261 (318)
+... ....+..+....+.+ ..... ..+......++... ..+...+..+++.++...+....++|+.+.++++++
T Consensus 188 ~~~~-~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~ 262 (292)
T COG0697 188 LQLL-LALLLLLLFFLSGFG---APILS-RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL 262 (292)
T ss_pred HHHH-HHHHHHHHHHhcccc---ccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 3333 222222222222221 11111 11233333444444 456667788999999999999999999999999999
Q ss_pred cCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 262 FADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 262 ~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
+||+ ++..+++|+.+++.|+...+..
T Consensus 263 ~~e~-~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 263 LGEP-LSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred hCCC-CcHHHHHHHHHHHHHHHHHhcc
Confidence 9999 9999999999999999998765
No 19
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.86 E-value=8.9e-20 Score=150.51 Aligned_cols=252 Identities=13% Similarity=0.077 Sum_probs=189.6
Q ss_pred cchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHH
Q 021029 13 KMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVA 92 (318)
Q Consensus 13 ~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 92 (318)
+.|.+|. .+. |...+++|..+++++++.+++-+|+ |++++++ +.++..|...+.+|.++|.+++.+|.+
T Consensus 30 ~Ak~LFP----~vG-~~g~t~lRl~~aaLIll~l~RPwr~-----r~~~~~~-~~~~~yGvsLg~MNl~FY~si~riPlG 98 (292)
T COG5006 30 FAKSLFP----LVG-AAGVTALRLAIAALILLALFRPWRR-----RLSKPQR-LALLAYGVSLGGMNLLFYLSIERIPLG 98 (292)
T ss_pred HHHHHcc----ccC-hhhHHHHHHHHHHHHHHHHhhHHHh-----ccChhhh-HHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 4688888 666 9999999999999999888764442 4456664 578899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC---cccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021029 93 FAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG---EININWIGVVYQMGGVVGEALRLIFMEILVK 169 (318)
Q Consensus 93 ~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~---~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~ 169 (318)
.+..+..+-|+.+.+++. ||..-..|+ .+++.|+.+.... ..+.|..|..+++.++.||+.|.+..||..+
T Consensus 99 iAVAiEF~GPL~vA~~~s----Rr~~d~vwv--aLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~ 172 (292)
T COG5006 99 IAVAIEFTGPLAVALLSS----RRLRDFVWV--ALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR 172 (292)
T ss_pred hhhhhhhccHHHHHHHhc----cchhhHHHH--HHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc
Confidence 999999999999887664 554444444 5556676654432 2456889999999999999999999999875
Q ss_pred hcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHH-HHHHHHHHhhcchhhhhhhhh
Q 021029 170 RKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFAL-NLSVFLVISHTSALTIRVAGV 248 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-~~~~~~~~~~~~a~~~s~~~~ 248 (318)
. .+...-+...+.+++++.+|......++.... +. ...+.+..++++... +..-..++++.++-+.++..+
T Consensus 173 ~----~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~---p~-ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS 244 (292)
T COG5006 173 A----EHGTAGVAVGMLVAALIVLPIGAAQAGPALFS---PS-LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS 244 (292)
T ss_pred c----CCCchHHHHHHHHHHHHHhhhhhhhcchhhcC---hH-HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence 3 25556666677777776655544222222211 11 112233334444444 334555799999999999999
Q ss_pred hhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 249 VKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 249 l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
+||.++.+.|++++||+ +|+.||+|++.++.+..-.....+
T Consensus 245 LePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 245 LEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred hhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhccccccC
Confidence 99999999999999999 999999999999999887665543
No 20
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.84 E-value=8.3e-20 Score=147.80 Aligned_cols=271 Identities=17% Similarity=0.271 Sum_probs=224.7
Q ss_pred ccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchH
Q 021029 12 SKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISV 91 (318)
Q Consensus 12 ~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 91 (318)
.+||++++ ..+|.....+.+.|.+++...++. +++.|..+.| .++ .++.+|.+++.....+....+++|.++
T Consensus 23 ltNKyVls--~~gfnMnflll~vQSlvcvv~l~i-Lk~l~~~~fR----~t~-aK~WfpiSfLLv~MIyt~SKsLqyL~v 94 (309)
T COG5070 23 LTNKYVLS--NLGFNMNFLLLAVQSLVCVVGLLI-LKFLRLVEFR----LTK-AKKWFPISFLLVVMIYTSSKSLQYLAV 94 (309)
T ss_pred HhhHheec--CCCCchhhHHHHHHHHHHHHHHHH-HHHHhHhhee----hhh-hhhhcCHHHHHHHHHHhcccceeeeee
Confidence 35999999 778888899999999987666544 3444443332 222 356788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCccc--------chHHHHHHHHHHHHHHHHHHHH
Q 021029 92 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN--------INWIGVVYQMGGVVGEALRLIF 163 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~--------~~~~G~~~~l~s~~~~a~~~v~ 163 (318)
+.+++++.++.+.++..+..++|.|++..+..+.+++++.-....++|.+ .+ -|++|.....+..+.+...
T Consensus 95 piYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~NclssaafVL~ 173 (309)
T COG5070 95 PIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSAAFVLI 173 (309)
T ss_pred eHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHHHHHHH
Confidence 99999999999999999999999999999999999999999998888763 33 4899999999999999999
Q ss_pred HHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccc-cccc-cchHHhHHHHHHHHHHHHHHHHHhhcchh
Q 021029 164 MEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE-TWHF-PPLMLTLNCLCTFALNLSVFLVISHTSAL 241 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~-~~~l~~~~~v~~~~~~~~~~~~~~~~~a~ 241 (318)
.||..+-. +....+.++|..+.+..++....++.|.....+.. .... .....+.+|+++++..++..++++-++.+
T Consensus 174 mrkri~lt--Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSST 251 (309)
T COG5070 174 MRKRIKLT--NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSST 251 (309)
T ss_pred HHHhhccc--ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhh
Confidence 99976643 35778899999999999888888877764433211 1111 12457889999999999999999999999
Q ss_pred hhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccchhh
Q 021029 242 TIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA 294 (318)
Q Consensus 242 ~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~~~ 294 (318)
+.++.+.+......+.|.++|||+ .+...+..+.+-..+...|...+.++++
T Consensus 252 tySMvGALNKlp~alaGlvffdap-~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 252 TYSMVGALNKLPIALAGLVFFDAP-VNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred HHHHHHHhhhChHHHhhhhhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 9999999999998888888887655433
No 21
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4.9e-19 Score=150.02 Aligned_cols=261 Identities=19% Similarity=0.211 Sum_probs=209.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHH
Q 021029 22 EINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIM 101 (318)
Q Consensus 22 ~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~ 101 (318)
+.+|.+|..+.+.|-+++.+.....+..++. + .+.++++++....++.......+++.|++|++-++..+.|++.
T Consensus 45 ~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~---~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscK 119 (327)
T KOG1581|consen 45 GERFEHSLFLVFCQRLVALLVSYAMLKWWKK---E--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCK 119 (327)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhcccc---c--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhh
Confidence 4578899999999999988887554332221 1 2223334567778888889999999999999999999999999
Q ss_pred HHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc---------ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 021029 102 PVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---------ININWIGVVYQMGGVVGEALRLIFMEILVKRKG 172 (318)
Q Consensus 102 pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~---------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~ 172 (318)
-+.++++..++.|+|++..+++..++..+|+.+....+ ...++.|+.+...+-+++++.+..++++.++
T Consensus 120 mIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~-- 197 (327)
T KOG1581|consen 120 MIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK-- 197 (327)
T ss_pred hhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc--
Confidence 99999999999999999999999999999999876531 1245899999999999999999999999984
Q ss_pred CCCChHHHHHHhhHHHHHHHHHHHHHhcCcccccc---ccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhh
Q 021029 173 LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL---ETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVV 249 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l 249 (318)
.+++++.+|++..+++++.-... .+..+....+. ...+..+.-+++.+.++...|...++.+++-++.+...++..
T Consensus 198 ~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~tt 276 (327)
T KOG1581|consen 198 YKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTT 276 (327)
T ss_pred CCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHH
Confidence 47899999999999988876555 22222211110 111112244556667777778888889999999999999999
Q ss_pred hhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccc
Q 021029 250 KDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 250 ~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~ 291 (318)
|..+++.++.+.||++ +++.||.|..+++.|+.+-...++|
T Consensus 277 Rk~~si~lS~i~f~h~-~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 277 RKMVSIMLSCIVFGHP-LSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHHhCCc-cchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999 9999999999999999887766544
No 22
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.83 E-value=5.5e-19 Score=153.59 Aligned_cols=227 Identities=15% Similarity=0.140 Sum_probs=187.7
Q ss_pred HHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcc--
Q 021029 63 IYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI-- 140 (318)
Q Consensus 63 ~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~-- 140 (318)
+-.+..+....+....+.+.|.|+.+++++..+++-+++-+|+..++.++..||+++.+.+++++.+.|+++++.+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 334455556777888999999999999999999999999999999999999999999999999999999999987632
Q ss_pred ------cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccc--cccc
Q 021029 141 ------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE--TWHF 212 (318)
Q Consensus 141 ------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~ 212 (318)
+....|+++++++|+.||.|.++.||...+++.++|-.....+.+++..+++.|+..+.+....+.+. ....
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q 316 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQ 316 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCce
Confidence 23479999999999999999999999988875688989999999999999998887665432221111 1111
Q ss_pred cchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 213 PPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 213 ~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
...+++.+.+.+++--+.+.++.-.++|....+..++.-+.+++.++++=|.+ +|+.+++|...|++|.+..++..+
T Consensus 317 ~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~-~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 317 FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKH-PSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHhheecccc
Confidence 11334444555666677788889999999999999999999999998887888 999999999999999999887654
No 23
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.3e-19 Score=147.89 Aligned_cols=260 Identities=18% Similarity=0.217 Sum_probs=201.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHH
Q 021029 23 INFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMP 102 (318)
Q Consensus 23 ~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~p 102 (318)
.+|++.+.+++.|+....++.-.+... |. +.+.+... .+.....++.|.+..+..|.|++|+|.++..+-+++.|
T Consensus 48 E~FTfalaLVf~qC~~N~vfAkvl~~i-r~---~~~~D~t~-~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKP 122 (337)
T KOG1580|consen 48 EKFTFALALVFFQCTANTVFAKVLFLI-RK---KTEIDNTP-TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKP 122 (337)
T ss_pred heehHHHHHHHHHHHHHHHHHHhheee-cc---cccccCCc-chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCC
Confidence 368889999999999887765433222 21 22222222 23566678888899999999999999999999999999
Q ss_pred HHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCccc-------chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 021029 103 VAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN-------INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKL 175 (318)
Q Consensus 103 v~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~-------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~ 175 (318)
+-+++++.++.|++.+|++++++++++.|+++..+.+.. ....|-++.+.|--..++....++++-.. ++-
T Consensus 123 IPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~--yq~ 200 (337)
T KOG1580|consen 123 IPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRAS--YQR 200 (337)
T ss_pred cceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHh--hcc
Confidence 999999999999999999999999999999998876432 12479999999999999999999997553 345
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHHh-cCcccccc-ccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHH
Q 021029 176 NPISVMYYVSPCSALCLFIPWIFL-EKPKMDAL-ETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 253 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~ 253 (318)
+...+|.+..+.+.+.+-...++. |......+ ...+..++-+.+-++++.+.|.+.|..+...+|.+-|++...+..+
T Consensus 201 ~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF 280 (337)
T KOG1580|consen 201 TGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF 280 (337)
T ss_pred CchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence 778889999988887775554432 21111111 1112223334555677777788888999999999999999999999
Q ss_pred HhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 254 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 254 ~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
.++.++++|+++ ++..||+|..+++.|...-....+
T Consensus 281 Til~SVllf~np-ls~rQwlgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 281 TILISVLLFNNP-LSGRQWLGTVLVFSALTADVVDGK 316 (337)
T ss_pred HHHHHHHHhcCc-CcHHHHHHHHHHHHHhhhHhhcCC
Confidence 999999999999 999999999999999877654443
No 24
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.79 E-value=9.7e-17 Score=136.11 Aligned_cols=256 Identities=14% Similarity=0.117 Sum_probs=194.5
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhccccCC--CCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHH
Q 021029 24 NFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVED--GMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIM 101 (318)
Q Consensus 24 ~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~ 101 (318)
..+ +..+...|...+..+++......|+.+.-. ..+++. +......++..+.++..+.+|..+-.+-.++.-....
T Consensus 31 ~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~-~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~In 108 (293)
T COG2962 31 PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKT-LLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFIN 108 (293)
T ss_pred cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHH
Confidence 355 889999999999888877766655544211 111222 2345556777888999999999998999999999999
Q ss_pred HHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHH
Q 021029 102 PVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVM 181 (318)
Q Consensus 102 pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~ 181 (318)
|++.++++.+++|||+++.||++++++.+||..-.....+.++.... =+++|++|...-|+. ++++.+-.
T Consensus 109 PL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~----la~sf~~Ygl~RK~~------~v~a~~g~ 178 (293)
T COG2962 109 PLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA----LALSFGLYGLLRKKL------KVDALTGL 178 (293)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH----HHHHHHHHHHHHHhc------CCchHHhH
Confidence 99999999999999999999999999999999988877778776543 356788887776665 46788888
Q ss_pred HHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhh
Q 021029 182 YYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALL 261 (318)
Q Consensus 182 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~ 261 (318)
+...+.-.+..+......+.............+.+++..|..+..--.....+-++.+-.+.+...+.+|....++++++
T Consensus 179 ~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i 258 (293)
T COG2962 179 TLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLI 258 (293)
T ss_pred HHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776555554444444443221111111223466777777777655555567789999999999999999999999999
Q ss_pred cCCcccchhHHHHHHHHHHHHHHHhhcccch
Q 021029 262 FADTKLTIINLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 262 ~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
+||+ ++..+....+++..|+.+|.....++
T Consensus 259 ~~E~-~~~~~~~~F~~IW~aL~l~~~d~l~~ 288 (293)
T COG2962 259 FGEP-FDSDQLVTFAFIWLALALFSIDGLYT 288 (293)
T ss_pred cCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999998776443
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.79 E-value=6.3e-17 Score=143.23 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=178.6
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHH-HHH
Q 021029 24 NFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKA-IMP 102 (318)
Q Consensus 24 ~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~-~~p 102 (318)
+.+ |.++. |..++.++...+....+..+ .+.+..+..-+..|..++.++.+++.+.++++++.+..+-+ +.+
T Consensus 25 g~~-~~~~~--~~~~g~l~~~~~~~~~~~~~----~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~ 97 (290)
T TIGR00776 25 GGP-YSQTL--GTTFGALILSIAIAIFVLPE----FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQL 97 (290)
T ss_pred CCH-HHHHH--HHHHHHHHHHHHHHHHhCCc----ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHH
Confidence 455 44443 78888777766555443211 22233344566667778899999999999999999999988 888
Q ss_pred HHHHHHHHHHcccccchhH----HHHHHHHhhhhhheecCccc-------ch-HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021029 103 VAVFILGVAAGLEVMSCRM----LLIMSVISFGVVVASYGEIN-------IN-WIGVVYQMGGVVGEALRLIFMEILVKR 170 (318)
Q Consensus 103 v~~~l~~~~~l~ek~~~~~----~~~i~l~~~Gv~~~~~~~~~-------~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~ 170 (318)
+++.+++.+++|||.+.++ +++++++++|+.+....+.+ .+ ..|.++++.|+++|++|.+..|+..
T Consensus 98 v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~-- 175 (290)
T TIGR00776 98 VGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG-- 175 (290)
T ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 9999999999999999999 99999999999987653211 23 6899999999999999999999762
Q ss_pred cCCCCChHHH---HHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHh-hcchhhhhhh
Q 021029 171 KGLKLNPISV---MYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVIS-HTSALTIRVA 246 (318)
Q Consensus 171 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~-~~~a~~~s~~ 246 (318)
.+|... ..+....++.+..++.. ...+. ...........|+.....+..++...+ +.++.+.+..
T Consensus 176 ----~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~l 244 (290)
T TIGR00776 176 ----VDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPL------KKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSL 244 (290)
T ss_pred ----CCcceehhHHHHHHHHHHHHHHHHHh-cccch------HHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHH
Confidence 366666 33333334443333321 00111 111112233366666555666777888 9999999999
Q ss_pred hhhhhHHHhhhhHhhcCCcccchhHH----HHHHHHHHHHHHHhh
Q 021029 247 GVVKDWVVVLFSALLFADTKLTIINL----FGYGIAIAGVAAYNN 287 (318)
Q Consensus 247 ~~l~~v~~~l~~~~~~~e~~~s~~~~----~G~~lii~g~~~~~~ 287 (318)
..++|+.+.+++++++||+ .+..|+ +|+++++.|+.+...
T Consensus 245 s~~~pvia~~~~v~~l~E~-~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 245 SQLGVIISTLGGILILGEK-KTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHhccC-CCcceeehhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999 999999 999999999987653
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.76 E-value=6.9e-17 Score=138.64 Aligned_cols=209 Identities=14% Similarity=0.153 Sum_probs=164.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcc
Q 021029 61 LEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI 140 (318)
Q Consensus 61 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~ 140 (318)
+++.+ ++..-+++|...+.+.+.++++.++++++++..+..+++++++++++|||.+.+||.++.+.+.|+.+...++.
T Consensus 14 ~~~~~-~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDTL-KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 55554 56666888999999999999999999999999999999999999999999999999999999999998765311
Q ss_pred -----------------cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcc
Q 021029 141 -----------------NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK 203 (318)
Q Consensus 141 -----------------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 203 (318)
.....|++..++++++.++..|+.||.+|+.+ .+.+......+..+.++.++.....+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 11358999999999999999999999999764 56677777777777777666654444322
Q ss_pred ccc---ccccccc-chHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHH
Q 021029 204 MDA---LETWHFP-PLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGI 277 (318)
Q Consensus 204 ~~~---~~~~~~~-~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~l 277 (318)
..+ ..++... +..++..++.+... ...+|+.|...-+....+.-+...+.++.+||.+ +|....+|..+
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~-~s~~f~lg~~~ 243 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFP-PSLSFLLGAAL 243 (244)
T ss_pred cccCCchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC-CchHHhhheec
Confidence 221 2233322 22333344444333 3458999999999999999999999999999999 99999999765
No 27
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.75 E-value=1.6e-16 Score=132.99 Aligned_cols=259 Identities=15% Similarity=0.186 Sum_probs=191.4
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhccccC------------CCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchH
Q 021029 24 NFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVE------------DGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISV 91 (318)
Q Consensus 24 ~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~ 91 (318)
+|.||...+..-++--.+++..+...+++...+ .+.+.+. ...++-+++...+..+.|.++.++++
T Consensus 35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p--~lfl~Pal~Di~gsslm~vgL~lTsA 112 (372)
T KOG3912|consen 35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP--VLFLPPALCDIAGSSLMYVGLNLTSA 112 (372)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc--ceecChHHHHHhhhHHHHHHHHHhhH
Confidence 588897766666554334443333322221111 0011121 23556788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcc----------cchHHHHHHHHHHHHHHHHHH
Q 021029 92 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI----------NINWIGVVYQMGGVVGEALRL 161 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~----------~~~~~G~~~~l~s~~~~a~~~ 161 (318)
+.+|+++....+|+.+++.-+++++++.++|+++....+|++++...|. +.-..|+++.+.+-+.-|.+.
T Consensus 113 SsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~ 192 (372)
T KOG3912|consen 113 SSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQM 192 (372)
T ss_pred HHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998765431 223689999999999999999
Q ss_pred HHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHH---HHHhcCc-ccc-ccc----ccc-------ccc-hHHhHHH--H
Q 021029 162 IFMEILVKRKGLKLNPISVMYYVSPCSALCLFIP---WIFLEKP-KMD-ALE----TWH-------FPP-LMLTLNC--L 222 (318)
Q Consensus 162 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~-~~~-~~~----~~~-------~~~-~l~~~~~--v 222 (318)
++.+|..++. +++|.+...|...++.+++.+. ......+ ... +++ +|. -.. ..+...+ +
T Consensus 193 v~Eek~l~~~--nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~v 270 (372)
T KOG3912|consen 193 VCEEKQLKKS--NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTV 270 (372)
T ss_pred HHHHhhhhhc--cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhh
Confidence 9999999865 6899999999999996655333 2222211 111 111 110 111 1122222 2
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 223 CTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
.-..+|+......+..|+++-.+.+.++.....+++..++.|. +...|+.|.++.+.|+..|+.
T Consensus 271 SiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~-f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 271 SIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEY-FHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred heeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 2224477777888999999999999999999999999999999 999999999999999999984
No 28
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.3e-15 Score=129.64 Aligned_cols=268 Identities=15% Similarity=0.137 Sum_probs=199.5
Q ss_pred hhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhc---cccCCCCC------HHHHHHHHhHHHHHHHHHHHHhhhh
Q 021029 15 QWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKV---MKVEDGMT------LEIYTTSVIPIGAMFAMTLWLGNTA 85 (318)
Q Consensus 15 K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~a 85 (318)
|+.-+.++..|. |.+..++-=.+-.+++........+ .+....++ +++ ..+...-+++|+..+.+.+.+
T Consensus 35 ~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-~lk~~vPa~iYalqNnl~yva 112 (345)
T KOG2234|consen 35 RYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRE-TLKVSVPALIYALQNNLQYVA 112 (345)
T ss_pred HHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHH-HHHHHHHHHHHHHhhhHHHHH
Confidence 333343344565 7777777777777777766554321 11111111 223 345666688999988899999
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc-----------ccchHHHHHHHHHHH
Q 021029 86 YLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-----------ININWIGVVYQMGGV 154 (318)
Q Consensus 86 l~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~-----------~~~~~~G~~~~l~s~ 154 (318)
+.+.+++++++...+..+.++++..+++|||.+++||.++++.+.|+.+...+. .+..+.|....+.+.
T Consensus 113 l~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c 192 (345)
T KOG2234|consen 113 LSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVAC 192 (345)
T ss_pred HhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876211 123478999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccc---cccccccc-chHHhHHHHHHHHHHHH
Q 021029 155 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD---ALETWHFP-PLMLTLNCLCTFALNLS 230 (318)
Q Consensus 155 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~-~~l~~~~~v~~~~~~~~ 230 (318)
.+.++..++.+|++|+. +.+.|........++.++.+......|..... -..+|... |..++..++.+....
T Consensus 193 ~~SgfAgvYfEkiLK~s--~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs-- 268 (345)
T KOG2234|consen 193 FLSGFAGVYFEKILKGS--NVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVS-- 268 (345)
T ss_pred HHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHH--
Confidence 99999999999999865 35666666666777777666665554443322 12233332 334444454444433
Q ss_pred HHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccc
Q 021029 231 VFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 231 ~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~ 291 (318)
..+|+.|...-+....+..++..+.++.+||.+ +|....+|..+++.++..|...+.+
T Consensus 269 --~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~-~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 269 --LVMKYADNILKGFSTSVAIILTTVASIALFDFQ-LTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred --HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCC-chHHHHHHHHHHHHHHHHhhcCCcc
Confidence 347999999999999999999999999999999 9999999999999999999965544
No 29
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=7.3e-18 Score=140.81 Aligned_cols=249 Identities=19% Similarity=0.229 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhcc-chHHHHHHHHHHHHHHHHH
Q 021029 29 LGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLY-ISVAFAQMLKAIMPVAVFI 107 (318)
Q Consensus 29 ~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~-~~~~~~~vl~~~~pv~~~l 107 (318)
..+|+.|+++-+.-.+++. .+....+++.+.|++ ...-..+...+.++|+++++ ++.+...++++-.++-+++
T Consensus 34 NLITFaqFlFia~eGlif~--skf~~~k~kiplk~Y----~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFT--SKFFTVKPKIPLKDY----AITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred eehHHHHHHHHHHhceeee--ccccccCCCCchhhh----heehheeeeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence 5889999998777766553 333333455555554 34555677788999999996 9999999999999999999
Q ss_pred HHHHHcccccchhHHHHHHHHhhhhhheecC---ccc-------------c-h--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 021029 108 LGVAAGLEVMSCRMLLIMSVISFGVVVASYG---EIN-------------I-N--WIGVVYQMGGVVGEALRLIFMEILV 168 (318)
Q Consensus 108 ~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~---~~~-------------~-~--~~G~~~~l~s~~~~a~~~v~~~~~~ 168 (318)
++++++|+|.+.+|+.++++..+|+++.+.. |.. . . ..|+.+...+.+..|...++++..+
T Consensus 108 ~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y 187 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY 187 (330)
T ss_pred HHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987642 111 0 0 3799999999999999999999999
Q ss_pred hhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcc---c------c----ccc--cccccchHHhHHHHHHHHHHHHHHH
Q 021029 169 KRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK---M------D----ALE--TWHFPPLMLTLNCLCTFALNLSVFL 233 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~------~----~~~--~~~~~~~l~~~~~v~~~~~~~~~~~ 233 (318)
|+.+ -++-+.++|....+...++ +...+- . + +.. ..+..+..++...+..+.+--..+.
T Consensus 188 ~kyG--Kh~~EalFytH~LsLP~Fl----f~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~ 261 (330)
T KOG1583|consen 188 QKYG--KHWKEALFYTHFLSLPLFL----FMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYI 261 (330)
T ss_pred HHhc--CChHHHHHHHHHhccchHH----HhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhh
Confidence 9764 5899999999866544332 211110 0 0 000 1222345566777777776666666
Q ss_pred HHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 234 VISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 234 ~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
.-.++++.+.+++..++..++.++|++.|+++ +++..|+|..+++.|...|.-..+
T Consensus 262 L~te~~sLTVTlvltlRKFvSLl~SiiyF~Np-ft~~h~lGa~lVF~Gt~~fa~~~~ 317 (330)
T KOG1583|consen 262 LTTETSSLTVTLVLTLRKFVSLLFSIIYFENP-FTPWHWLGAALVFFGTLLFANVWN 317 (330)
T ss_pred hhceecceEEEEeeeHHHHHHHhheeeEecCC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence 67889999999999999999999999999999 999999999999999999875443
No 30
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.1e-16 Score=133.33 Aligned_cols=264 Identities=17% Similarity=0.184 Sum_probs=207.6
Q ss_pred chhhcccCcccCC-chHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHH
Q 021029 14 MQWVLSSKEINFP-FPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVA 92 (318)
Q Consensus 14 ~K~~~~~~~~~~~-~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~ 92 (318)
++++++ ..+|. +-+.+++.|+++-..+.+..+...+ .++...| +|.....+....+.+.+.+-++.|.+.+
T Consensus 62 qElif~--~~gfkp~GWylTlvQf~~Ysg~glie~~~~~--~k~r~iP----~rtY~~la~~t~gtmGLsn~SlgYLNYP 133 (367)
T KOG1582|consen 62 QELIFN--VEGFKPFGWYLTLVQFLVYSGFGLIELQLIQ--TKRRVIP----WRTYVILAFLTVGTMGLSNGSLGYLNYP 133 (367)
T ss_pred HHHHhc--cccCcccchHHHHHHHHHHHhhhheEEEeec--ccceecc----hhHhhhhHhhhhhccccCcCccccccCc
Confidence 567777 66776 6789999999987666554432211 1122233 4556667888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc----ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021029 93 FAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE----ININWIGVVYQMGGVVGEALRLIFMEILV 168 (318)
Q Consensus 93 ~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~----~~~~~~G~~~~l~s~~~~a~~~v~~~~~~ 168 (318)
.-.++++|..+-+++.+.++-++|..+..+.+..+..+|++.....| .++|..|+.+.-.+-++.|+-...++|.+
T Consensus 134 tQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m 213 (367)
T KOG1582|consen 134 TQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAM 213 (367)
T ss_pred HHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999887654 56888999999999999999999999999
Q ss_pred hhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcC-cc-cc--ccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhh
Q 021029 169 KRKGLKLNPISVMYYVSPCSALCLFIPWIFLEK-PK-MD--ALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIR 244 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~-~~--~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s 244 (318)
+.++ -+..++++|...++.+.++.+..+... .. +. ..+++.. ....++-+..+++.+......++..+|.+++
T Consensus 214 ~~~~--~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~t-yGy~~~~s~~gylG~~~VLalI~~fGA~~aa 290 (367)
T KOG1582|consen 214 KMNP--ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRT-YGYAFLFSLAGYLGIVFVLALIKLFGALIAA 290 (367)
T ss_pred hhCC--CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhH-HHHHHHHHHHhHhhHHHHHHHHHHhchhHHH
Confidence 8654 466888899999999988877665322 11 11 1122211 1223333445555555566678999999999
Q ss_pred hhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 245 VAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 245 ~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
.+...+....+++|+++|..+ +|....-|..++..|+++--+.+
T Consensus 291 tvTTaRKavTi~lSfllFsKP-fT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 291 TVTTARKAVTILLSFLLFSKP-FTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHhHhHHHHHHHHHHHcCc-hHHHHhhhhHHHHHHHHhhcccC
Confidence 999999999999999999999 99999999999999999876655
No 31
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.70 E-value=3.4e-18 Score=142.12 Aligned_cols=255 Identities=15% Similarity=0.098 Sum_probs=189.1
Q ss_pred CcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHH
Q 021029 21 KEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAI 100 (318)
Q Consensus 21 ~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~ 100 (318)
+...++ |..+..-|+++-.++..++...++..-.- +-..| +.+++-|+....+....++|++|.+.+.+.++..+
T Consensus 58 ~~~e~~-p~e~a~~r~l~~mlit~pcliy~~~~v~g-p~g~R---~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFs 132 (346)
T KOG4510|consen 58 KVLEND-PMELASFRLLVRMLITYPCLIYYMQPVIG-PEGKR---KWLILRGFMGFTGVMLMYYALMYMSLADAVVITFS 132 (346)
T ss_pred hhhccC-hhHhhhhhhhhehhhhheEEEEEeeeeec-CCCcE---EEEEeehhhhhhHHHHHHHHHhhcchhheEEEEec
Confidence 345566 88888888776666655554332221100 11111 12444566667777888999999999999999999
Q ss_pred HHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC-----cc---------cchHHHHHHHHHHHHHHHHHHHHHHH
Q 021029 101 MPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG-----EI---------NINWIGVVYQMGGVVGEALRLIFMEI 166 (318)
Q Consensus 101 ~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~-----~~---------~~~~~G~~~~l~s~~~~a~~~v~~~~ 166 (318)
+|+++.++++.++|||+++.+.++..+.+.|++++..+ |. +.+..|-..++.+.++-|.-.++.|+
T Consensus 133 sPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~ 212 (346)
T KOG4510|consen 133 SPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRY 212 (346)
T ss_pred ChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHH
Confidence 99999999999999999999999999999999987642 10 22356888888899998988999999
Q ss_pred HhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhh
Q 021029 167 LVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVA 246 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~ 246 (318)
+.++ .|..-.+.|...++.+..++........+++. .+ .++++++.-|+.+++.|....+.+++=-|...++.
T Consensus 213 iGk~----~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~--cg-kdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim 285 (346)
T KOG4510|consen 213 IGKN----AHAIMSVSYFSLITLVVSLIGCASIGAVQLPH--CG-KDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIM 285 (346)
T ss_pred hhcc----ccEEEEehHHHHHHHHHHHHHHhhccceecCc--cc-cceEEEEEehhhhhHHHHHHHHHhhhhccCCeehh
Confidence 8774 35555566777776666555544332222211 11 22345566688889999988899988888888999
Q ss_pred hhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 247 GVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 247 ~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
.+.+-+++.++.+++|||. +|++.|+|+++++.+..+....
T Consensus 286 ~~~dvvfAf~wqv~ff~~~-Pt~ws~~Ga~~vvsS~v~~a~~ 326 (346)
T KOG4510|consen 286 TYTDVVFAFFWQVLFFGHW-PTIWSWVGAVMVVSSTVWVALK 326 (346)
T ss_pred hHHHHHHHHHHHHHHhcCC-ChHHHhhceeeeehhHHHHHHH
Confidence 9999999999999999999 9999999999999888776543
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.69 E-value=6.4e-16 Score=124.03 Aligned_cols=141 Identities=33% Similarity=0.517 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc---CCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccccc----c--c---cccc
Q 021029 146 GVVYQMGGVVGEALRLIFMEILVKRK---GLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL----E--T---WHFP 213 (318)
Q Consensus 146 G~~~~l~s~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~--~---~~~~ 213 (318)
|.++++.|.++.|+++++.|+.++++ +.+.++.+++.+.++.+.++++++....|.+..... . + ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78899999999999999999999873 347899999999999999999999888887653211 1 1 1123
Q ss_pred chHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 214 PLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 214 ~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
+..++.+++.++..|+..+.+++++||+++++.+.+|.+..+++|+++|||+ +|..+++|.++.+.|...|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~-~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEP-ITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCc-CCHHHHHHHHHHHHHHheeeC
Confidence 4668889999999999999999999999999999999999999999999999 999999999999999999875
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.57 E-value=9.7e-16 Score=126.79 Aligned_cols=257 Identities=15% Similarity=0.153 Sum_probs=195.1
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAF 93 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 93 (318)
+.++-+| +.+-|..-+|.-+..-+++-.++..+++. ..+..+|+.++.++...-++++...|.||++...
T Consensus 37 ss~la~k---~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-------~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtS 106 (336)
T KOG2766|consen 37 SSELARK---GINAPTSQTFLNYVLLALVYGPIMLFRRK-------YIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTS 106 (336)
T ss_pred hHHHHhc---cCCCccHHHHHHHHHHHHHHhhHHHhhhH-------HHHHHHHHhhheeEEeecccEEEeeehhhcchHH
Confidence 4455442 34557777777776655555555443321 1233345677777777778888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCc--------ccchHHHHHHHHHHHHHHHHHHHHHH
Q 021029 94 AQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE--------ININWIGVVYQMGGVVGEALRLIFME 165 (318)
Q Consensus 94 ~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~--------~~~~~~G~~~~l~s~~~~a~~~v~~~ 165 (318)
.+.+..-..+.+++++++++|-|.++.++.|+.++..|+.++..+| .+....|+++.++++-+||..++..+
T Consensus 107 i~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EE 186 (336)
T KOG2766|consen 107 IMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEE 186 (336)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHH
Confidence 9999999999999999999999999999999999999999887654 23456899999999999999999999
Q ss_pred HHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhh
Q 021029 166 ILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRV 245 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~ 245 (318)
-+.+ +.+..+++...+++++++..+= +..|...... -+|++.....+...++.+..+...-..+|..+++..++
T Consensus 187 flvk----n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t-l~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nl 260 (336)
T KOG2766|consen 187 FLVK----NADRVELMGFLGLFGAIISAIQ-FIFERHHVST-LHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNL 260 (336)
T ss_pred HHHh----cCcHHHHHHHHHHHHHHHHHHH-Hhhhccceee-EeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEh
Confidence 9987 4589999999999999988666 4455543322 23333323333344555555555555678889988888
Q ss_pred hhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 246 AGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 246 ~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
-.......++++ -.||-+ .+|..++..+.+..|.++|...+
T Consensus 261 slLTsDmwsl~i--~~FgYh-v~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 261 SLLTSDMWSLLI--RTFGYH-VDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred hHhHHHHHHHHH--HHHhcc-hhhhhHHHHHHHHHhhEEeeccc
Confidence 888888888887 678888 99999999999999999996443
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.31 E-value=1.5e-11 Score=94.81 Aligned_cols=117 Identities=22% Similarity=0.278 Sum_probs=93.8
Q ss_pred ccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHH-HHHHHHHhhhhhccch
Q 021029 12 SKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAM-FAMTLWLGNTAYLYIS 90 (318)
Q Consensus 12 ~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~ 90 (318)
..+|...+ +.+ |...+++|+..+.+ ++++....++.+ ..+.++++.. ..+..+.+ ...+..+++.++++++
T Consensus 8 ~~~k~~~~----~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 8 VFSKKLLK----KIS-PLSITFWRFLIAGI-LLILLLILGRKP-FKNLSPRQWL-WLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred HHHHHHhc----cCC-HHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCChhhhh-hhhHhhccceehHHHHHHHHHHhcc
Confidence 34677777 577 99999999999987 555544444433 2344455544 34444444 6889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhee
Q 021029 91 VAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 91 ~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
++..+.+..+.|+++.+++++++||++++++++|+.++++|+.+..
T Consensus 80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998753
No 35
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.31 E-value=2e-11 Score=104.09 Aligned_cols=190 Identities=14% Similarity=0.124 Sum_probs=128.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecCcc---------------------------c
Q 021029 89 ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI---------------------------N 141 (318)
Q Consensus 89 ~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~---------------------------~ 141 (318)
++++.....++..++++++.+....+||++..++++.++...|+.....+|. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 4567788889999999999999999999999999999999999875222110 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccc-c---cccccccchHH
Q 021029 142 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD-A---LETWHFPPLML 217 (318)
Q Consensus 142 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~---~~~~~~~~~l~ 217 (318)
..+.|....+.+..+.++..+++++..++++ ...+.......+.+.+...... ..+..... . ...++...+.+
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~--~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 158 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD--TMFWSRNLQLPLFGLFSTFSVL-LWSDGTLISNFGFFIGYPTAVWIV 158 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC--CchHHHHHHHHHHHHHHHHHHH-hhcccchhhccCcccCCchHHHHH
Confidence 3357888888888999999999999866532 2233323333333322211111 11111111 1 11122111222
Q ss_pred hHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHH
Q 021029 218 TLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY 285 (318)
Q Consensus 218 ~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~ 285 (318)
+ +.....+.+....+++.|+.+.+....++++.+.++++++|||+ ++..++.|+.+++.|++.|
T Consensus 159 ~---~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 159 G---LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFLY 222 (222)
T ss_pred H---HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEeC
Confidence 2 22233334455679999999999999999999999999999999 9999999999999987764
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.27 E-value=2.2e-11 Score=97.41 Aligned_cols=229 Identities=15% Similarity=0.148 Sum_probs=163.6
Q ss_pred CCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 58 GMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 58 ~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
.++-|.++.+.-|.++.+.+.++.+..+++.++++.++.+..+.-.|+.+++++++|+|+...++++..+++.|+.++.+
T Consensus 46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 44455556677788888999999999999999999999999999999999999999999999999999999999999987
Q ss_pred Cc--ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHH--hcC-ccccccccccc
Q 021029 138 GE--ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIF--LEK-PKMDALETWHF 212 (318)
Q Consensus 138 ~~--~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~-~~~~~~~~~~~ 212 (318)
.| ..+++.|+..+..|+...|+|.|..|+...+.+.+ +....+.-...+...+...|... +.+ .++.+....
T Consensus 126 ~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G-daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~-- 202 (290)
T KOG4314|consen 126 ADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG-DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAA-- 202 (290)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch-hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhC--
Confidence 55 45689999999999999999999999988754211 22222222222222222222221 111 111111111
Q ss_pred cchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 213 PPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 213 ~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
.|........+....|+.....+..+.|...|+-....-+-...++. +++|.+.+.....|..++..|..+.-....
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDi-L~q~l~~ntl~La~T~iI~i~FiLiiiP~d 279 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDI-LFQELEFNTLFLAATCIICIGFILIIIPED 279 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHH-HHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence 12333334444445566655667788888888777776666677765 455555889999999999999887765543
No 37
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.24 E-value=4e-11 Score=90.98 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCC-CCHHHHHHHHhHHHHHH-HHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHH
Q 021029 33 LLHMVFSSVLCFLLTKVFKVMKVEDG-MTLEIYTTSVIPIGAMF-AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGV 110 (318)
Q Consensus 33 ~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~ 110 (318)
.+|+.++.+++..+....++.+...+ .+++. +...+..+.+. ..+..++++|+++.+ +....+.+++|+++.+++.
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKP-WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW 79 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence 47889888888877666444321111 11122 22344445554 488899999999999 5888999999999999999
Q ss_pred HHcccccchhHHHHHHHHhhhhhheecCccc
Q 021029 111 AAGLEVMSCRMLLIMSVISFGVVVASYGEIN 141 (318)
Q Consensus 111 ~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~ 141 (318)
+++|||++++++.++.++++|++++..+|.+
T Consensus 80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 80 LFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999998877654
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.17 E-value=2.6e-10 Score=87.77 Aligned_cols=125 Identities=18% Similarity=0.225 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHH
Q 021029 155 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLV 234 (318)
Q Consensus 155 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~ 234 (318)
++||.+.++.|+..++ .++.....+....+.+ +.+.....+.... ..............+.+.....+...+.+
T Consensus 1 ~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK----ISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred ceeeeHHHHHHHHhcc----CCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 4689999999999873 6899999999988887 5444444433221 11111112233333333345556667788
Q ss_pred HhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 235 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 235 ~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
+++.++...+...+++|+++.++++++++|+ +++.+++|+++++.|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999999998754
No 39
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.16 E-value=6e-10 Score=83.06 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHH
Q 021029 147 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 226 (318)
Q Consensus 147 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~ 226 (318)
.++++.+++++++..++.|--.+ ++||...+..-+....+++..........+.... .-+..+..++++|+.+..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~----~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~-~~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE----GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE-IGPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc----ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc-cCcceehhhhHHHHHHHH
Confidence 58899999999999999999877 4577777777766665555444433222111111 112233556778888888
Q ss_pred HHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHH
Q 021029 227 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY 285 (318)
Q Consensus 227 ~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~ 285 (318)
-..++|++++.-.+......+-..+++++++|++++||+ +|..+++|++++..|..+.
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeE
Confidence 888899999999999999999999999999999999999 9999999999999998654
No 40
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.15 E-value=1.4e-10 Score=86.45 Aligned_cols=117 Identities=14% Similarity=0.045 Sum_probs=102.0
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHH
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAF 93 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~ 93 (318)
.|.-++ +.+ |.+-++.|-.+..+++..+....++.+.....+.|.+. .+..-|+..+.++.++|.|++.-+++.
T Consensus 22 ~KIGl~----~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~l-flilSGla~glswl~Yf~ALk~G~as~ 95 (140)
T COG2510 22 AKIGLE----GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWL-FLILSGLAGGLSWLLYFRALKKGKASR 95 (140)
T ss_pred HHHhcc----ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceeh-hhhHHHHHHHHHHHHHHHHHhcCCcce
Confidence 566667 677 99999999999999998888888877766556666654 455667888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhee
Q 021029 94 AQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 94 ~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
..-+..++|+++.+++++++|||++..+|+|+.+.++|+++..
T Consensus 96 VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 96 VVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred EEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999998765
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.00 E-value=2.1e-07 Score=80.14 Aligned_cols=209 Identities=14% Similarity=0.080 Sum_probs=150.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHHH----HHHHHhhhhhhee
Q 021029 62 EIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLL----IMSVISFGVVVAS 136 (318)
Q Consensus 62 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~~----~i~l~~~Gv~~~~ 136 (318)
+.+ ..-+..|+++..++..++.++++.++|.+.=+. ...-+.+.+++.++++|..+..+++ ++++.++|+.+.+
T Consensus 43 ~~~-~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 43 TSF-IVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 443 456778899999999999999999888765544 5778889999999999977766655 7788889999887
Q ss_pred cCccc--------chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccc
Q 021029 137 YGEIN--------INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE 208 (318)
Q Consensus 137 ~~~~~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 208 (318)
..|.+ ....|....+++.+.|..|.++.|-. +.+++....=++.. .++..............+
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqaiG-m~i~a~i~~~~~~~~~~~-- 192 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAIG-MLIGAFIFNLFSKKPFFE-- 192 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHHH-HHHHHHHHhhcccccccc--
Confidence 65422 12469999999999999999997764 35777776655432 222222222211111111
Q ss_pred cccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchh----HHHHHHHHHHHHHH
Q 021029 209 TWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTII----NLFGYGIAIAGVAA 284 (318)
Q Consensus 209 ~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~----~~~G~~lii~g~~~ 284 (318)
...+.-+.+|++-...|..++...++.+..+.=...-+..+++.+.|++++||+ =+.. .++|.++++.|..+
T Consensus 193 ---k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~-Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 193 ---KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK-KTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred ---cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec-CchhhHHHHHHHHHHHHHhhhc
Confidence 111334556666666677777788888888888888899999999999999999 5544 56788888887653
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.80 E-value=1.5e-07 Score=83.86 Aligned_cols=140 Identities=9% Similarity=0.110 Sum_probs=105.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcC-cccc-ccccccccchHH
Q 021029 140 ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEK-PKMD-ALETWHFPPLML 217 (318)
Q Consensus 140 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~-~~~~~~~~~~l~ 217 (318)
.+....|.++.+.++++|+...++.|.. . +++|.++..+...++.+++.+....... +... ....+ ..+...
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 76 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTP-QKIFML 76 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCH-HHHHHH
Confidence 3445689999999999999999999764 3 4689999999999988766554433211 1100 00011 111223
Q ss_pred hHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 218 TLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 218 ~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
..++......+...+.+++++++.++++..+..|++..++++++++|+ ++..+++|+++.+.|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~-~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGER-FRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHH
Confidence 344555555677788899999999999999999999999999999999 99999999999999988654
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.79 E-value=1.8e-07 Score=81.47 Aligned_cols=136 Identities=13% Similarity=0.105 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccc--cccc--cccccchHHhHH
Q 021029 145 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM--DALE--TWHFPPLMLTLN 220 (318)
Q Consensus 145 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~--~~~~~~~l~~~~ 220 (318)
.|.++.++++++|+...++.|.. . +++|.++.++-..++++++.+.......... .... ............
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence 48899999999999999999973 3 3799999999999988776554433221100 0000 111112335556
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 221 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 221 ~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
+++....+...+.+++++++.++++..+..|++..++++++++|+ ++..+++|..+.+.|+.+..
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek-~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKER-ISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHH
Confidence 666666677788899999999999999999999999999999999 99999999999999987653
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.79 E-value=1.9e-07 Score=82.53 Aligned_cols=132 Identities=11% Similarity=0.105 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhc-CccccccccccccchHHhHHHHHHH
Q 021029 147 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE-KPKMDALETWHFPPLMLTLNCLCTF 225 (318)
Q Consensus 147 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~v~~~ 225 (318)
.++.+.+++++|.+.+..|+..+++ ++. ..+....+++.+.+...... ....... . ...+.....+++...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~----~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 74 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE----PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRL-P-ATFWLLLAISAVANM 74 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch----hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCc-c-hhhHHHHHHHHHHHH
Confidence 5678999999999999999887642 333 34444445555544433221 1111111 1 112234555666666
Q ss_pred HHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 226 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 226 ~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
..+...+.++++.++...+...+..|++..+++++++||+ ++..+++|.++++.|+.....
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhc
Confidence 7777788889999999999999999999999999999999 999999999999999987653
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.73 E-value=2.1e-07 Score=81.14 Aligned_cols=114 Identities=15% Similarity=0.138 Sum_probs=84.9
Q ss_pred cchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHH-HHHHHHHHHhhhhhccchH
Q 021029 13 KMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIG-AMFAMTLWLGNTAYLYISV 91 (318)
Q Consensus 13 ~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~al~~~~~ 91 (318)
++|...+ +.+.+ +.....+|+.++.+++.++....++.. ..+.+++. ..+..+ +.......++++++++.++
T Consensus 146 ~~k~~~~--~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~ 218 (260)
T TIGR00950 146 LYKRLVK--KEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNP---QALSLQWG-ALLYLGLIGTALAYFLWNKGLTLVDP 218 (260)
T ss_pred HHhHHhh--cCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCC---CcchHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3566655 22222 445666789999888877765433221 22344443 334344 4456788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhh
Q 021029 92 AFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 133 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~ 133 (318)
+.++++..+.|+++++++++++||+++..++.|..+.+.|+.
T Consensus 219 ~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 219 SAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999863
No 46
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.51 E-value=1.4e-06 Score=77.38 Aligned_cols=210 Identities=15% Similarity=0.056 Sum_probs=117.2
Q ss_pred HHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC---ccc-ch-----
Q 021029 73 AMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG---EIN-IN----- 143 (318)
Q Consensus 73 ~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~---~~~-~~----- 143 (318)
+.+..+..+.+.|+.+.|.+..+-+.+..-++..+++..++|||++++.+.|+.+++.|..++... +.+ .+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 456778889999999999999999999999999999999999999999999999999999875431 111 11
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHH----HHHHHhcCcccc-cccccc
Q 021029 144 -------WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF----IPWIFLEKPKMD-ALETWH 211 (318)
Q Consensus 144 -------~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~-~~~~~~ 211 (318)
+..+... ...++..+.....+|..++ +...-....+.+++.... ....+.+..... ....+
T Consensus 138 ~~~~~~~fl~y~~~-~~~~~~~L~~~~~~r~g~~-----~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~- 210 (300)
T PF05653_consen 138 ALLSQPGFLVYFIL-VLVLILILIFFIKPRYGRR-----NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYP- 210 (300)
T ss_pred HHhcCcceehhHHH-HHHHHHHHHHhhcchhccc-----ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhh-
Confidence 1111111 1112222222222232221 111001111111111110 111111110111 11111
Q ss_pred ccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhh-hhhHHHhhhhHhhcCCcc-cch----hHHHHHHHHHHHHHHH
Q 021029 212 FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTK-LTI----INLFGYGIAIAGVAAY 285 (318)
Q Consensus 212 ~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~-l~~v~~~l~~~~~~~e~~-~s~----~~~~G~~lii~g~~~~ 285 (318)
..+.+++...++....-.....++++.|+.......+ .-...+++-|.++|+|.. .+. ...+|..+++.|+++.
T Consensus 211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL 290 (300)
T PF05653_consen 211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL 290 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence 1112222223333333345667788887765544433 456677888899999762 444 3467888888898887
Q ss_pred hhcc
Q 021029 286 NNHK 289 (318)
Q Consensus 286 ~~~~ 289 (318)
+..+
T Consensus 291 ~~~~ 294 (300)
T PF05653_consen 291 SSSK 294 (300)
T ss_pred eccC
Confidence 6554
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.50 E-value=2.9e-06 Score=77.25 Aligned_cols=137 Identities=8% Similarity=0.075 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHH
Q 021029 146 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 225 (318)
Q Consensus 146 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 225 (318)
-+...+..-++|+.+.++.|..+++ .+++.....+-..++++++++.....+.........+.. +..+...++++.
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~---G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~-~~~l~l~g~~g~ 89 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSK---GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI-LSKIGLLGFLGS 89 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHC---CCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH-HHHHHHHHHHHH
Confidence 3556677789999999999999974 679999999998888888766655443221111112221 223344555555
Q ss_pred HHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhh------cCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 226 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALL------FADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 226 ~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~------~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
.++...+..+++++|..+++..+..|++..++++++ ++|+ ++..+++|+++.++|+.....
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er-~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER-SSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccc-ccHHHHHHHHHHHHHHHHHHH
Confidence 555567888999999999999999999999999999 6999 999999999999999987553
No 48
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.50 E-value=3.4e-06 Score=63.46 Aligned_cols=65 Identities=20% Similarity=0.078 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhee
Q 021029 72 GAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 72 ~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
..+++....+...+++..|.+.+..+.++.++++.+++++++|||++.++++|+.+++.|+.++.
T Consensus 44 ~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 44 LACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 35678888999999999999999999999999999999999999999999999999999998764
No 49
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.31 E-value=1.1e-05 Score=71.60 Aligned_cols=109 Identities=18% Similarity=0.140 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHH-HHHHHHHHhhhhhccchHHHHHHHHHHHHHHHH
Q 021029 28 PLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGA-MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF 106 (318)
Q Consensus 28 p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~ 106 (318)
+...+.+++.++..++.++........ ....+.+.+. ..+..++ .......+++.++++.+++.++++..++|++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~ 254 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGERL-TALPTLSGFL-ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAV 254 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCcc-cccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 566778999988888776654332211 1112334433 3333343 456778899999999999999999999999999
Q ss_pred HHHHHHcccccchhHHHHHHHHhhhhhheecC
Q 021029 107 ILGVAAGLEVMSCRMLLIMSVISFGVVVASYG 138 (318)
Q Consensus 107 l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~ 138 (318)
++++++++|+++..+++|..+.+.|+.+....
T Consensus 255 i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 255 LLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876543
No 50
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.30 E-value=1.4e-05 Score=63.74 Aligned_cols=122 Identities=13% Similarity=0.067 Sum_probs=95.4
Q ss_pred cchhhcccC---cccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCC--------C-HHHHHHHHhHHHHHHHHHHH
Q 021029 13 KMQWVLSSK---EINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGM--------T-LEIYTTSVIPIGAMFAMTLW 80 (318)
Q Consensus 13 ~~K~~~~~~---~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~l~~~~~~~~~~~ 80 (318)
+.|..++++ ..+.+ |..+..+.-..+.+++++.....+..+..... + ..+....++..++.....+.
T Consensus 18 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 96 (153)
T PF03151_consen 18 LIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNL 96 (153)
T ss_pred HHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 357777742 24666 99999999999999988887665544411110 0 22333445556777778889
Q ss_pred HhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhe
Q 021029 81 LGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 135 (318)
Q Consensus 81 ~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~ 135 (318)
..+..++++++-+.+++.....+.+.+++.++++|+++..++.|+.+++.|..+-
T Consensus 97 ~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 97 SSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999999999999999999998753
No 51
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.23 E-value=4.9e-05 Score=69.31 Aligned_cols=138 Identities=12% Similarity=0.133 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-hHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHH
Q 021029 144 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLN-PISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCL 222 (318)
Q Consensus 144 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 222 (318)
+.-..+.+.-=.+...++.+.|...++ .+ |+.+..++..++.++..+..... ....+....+...+..++..++
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~----~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl 122 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNM----LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGL 122 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHH
Confidence 333344444445556668888888874 46 99999999988877654443321 1111111111112234555666
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 223 CTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
++...+...+.+++++++..+++...++|++.++++.++++|+ ++..++.|++++++|+.+...
T Consensus 123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek-~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQF-LNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHheec
Confidence 6666566666789999999999999999999999999999999 999999999999999987653
No 52
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.19 E-value=5.5e-05 Score=67.32 Aligned_cols=130 Identities=15% Similarity=0.210 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHH
Q 021029 145 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 224 (318)
Q Consensus 145 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 224 (318)
.++++++.+.++|+...+..|...+ +++|.....+-...+.+++.+.. ..+... .. .......+++..
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~----~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~---~~--~~~~~~~~~l~~ 71 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE----SLGPVGGAAMIYSVSGLLLLLTV---GFPRLR---QF--PKRYLLAGGLLF 71 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc----cCChHHHHHHHHHHHHHHHHHHc---cccccc---cc--cHHHHHHHhHHH
Confidence 4577899999999999999998876 56899999888877777665431 111111 11 112223333333
Q ss_pred HHHHHHHHHHH----hhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 225 FALNLSVFLVI----SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 225 ~~~~~~~~~~~----~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
..++...+... +..++.+.++..++.|++..++++++++|+ ++..+++|+++.+.|+.+...
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheec
Confidence 33333333333 356778889999999999999999999999 999999999999999987653
No 53
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.17 E-value=3.8e-05 Score=68.31 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHH-HHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHH
Q 021029 28 PLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIG-AMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF 106 (318)
Q Consensus 28 p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~ 106 (318)
|.... +...++.+.+.++...... ....++..+. ..+..+ ++..+.+.++++++++++++.++.+..++|++..
T Consensus 176 ~~~~~-~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~-~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~ 250 (293)
T PRK10532 176 PATVA-IGSLIAALIFVPIGALQAG---EALWHWSILP-LGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAA 250 (293)
T ss_pred chHHH-HHHHHHHHHHHHHHHHccC---cccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHH
Confidence 65554 4556666666655443221 1112333222 222333 3456777899999999999999999999999999
Q ss_pred HHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 107 ILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 107 l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
++++++++|+++..+++|..+.+.|++....
T Consensus 251 l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 251 VSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999987643
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.16 E-value=0.00012 Score=56.40 Aligned_cols=121 Identities=13% Similarity=0.035 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHH
Q 021029 145 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 224 (318)
Q Consensus 145 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 224 (318)
.|.++.+.+.++.+...++.|+-.++.+ +.+... . . . .... ...+ +. ..+..+.++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~---~-~-~----~~~~-~~~~--------p~----~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAW---D-F-I----AALL-AFGL--------AL----RAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-Cccchh---H-H-H----HHHH-HHhc--------cH----HHHHHHHHHH
Confidence 3788899999999999999999877543 111111 0 0 0 0000 0000 00 1122222333
Q ss_pred HHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHh--hcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 225 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSAL--LFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~--~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
.........++++.+...+.....+.++...+.++. +|||+ +|+.+++|++++++|++..+..+
T Consensus 59 ~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~-ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 59 ALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNET-FSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhccCC
Confidence 333445566789999988888888887777777774 89999 99999999999999999987543
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.10 E-value=0.00012 Score=65.33 Aligned_cols=125 Identities=18% Similarity=0.139 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHH
Q 021029 147 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 226 (318)
Q Consensus 147 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~ 226 (318)
.++.++++++|+...+..|...+ +++|.....+-..++++.+++.. ..+.. .+ ......++....
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~----~~~p~~~~~~R~~~a~~~l~~~~---~~~~~----~~----~~~~~~g~~~~~ 70 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH----NMPPLMLAGLRFMLVAFPAIFFV---ARPKV----PL----NLLLGYGLTISF 70 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHh---cCCCC----ch----HHHHHHHHHHHH
Confidence 36688899999999999998776 47999999999877665543322 11110 11 112222332222
Q ss_pred -HHHHHHHHHhh-cchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 227 -LNLSVFLVISH-TSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 227 -~~~~~~~~~~~-~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
.....+...++ .++...++.....|++..++++++++|+ ++..+++|.++.+.|+.+...
T Consensus 71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhcc
Confidence 22234556676 5778889899999999999999999999 999999999999999887653
No 56
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.04 E-value=0.0027 Score=57.19 Aligned_cols=218 Identities=11% Similarity=0.012 Sum_probs=137.1
Q ss_pred HHHhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHccccc-------chhHHHHHHHHhhhhhheec
Q 021029 66 TSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVM-------SCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 66 ~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~-------~~~~~~~i~l~~~Gv~~~~~ 137 (318)
...++.|++...++..+..+.++.+++...-+. .++-+...++..++++|-. ...-.+++++.++|+++...
T Consensus 74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 356777899999999999999999999876554 6788888899999988643 23466788888999998766
Q ss_pred ----Ccc--------c-chHHHHHHHHHHHHHHHHHH-------HHHHHHhhhcCCCCChHHHHHHhhH---HHHHHHHH
Q 021029 138 ----GEI--------N-INWIGVVYQMGGVVGEALRL-------IFMEILVKRKGLKLNPISVMYYVSP---CSALCLFI 194 (318)
Q Consensus 138 ----~~~--------~-~~~~G~~~~l~s~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ 194 (318)
.|. + ....|.++++++.+.+++|+ ...+.... .+.++.....-+.. .+..+.-.
T Consensus 154 Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~---~g~~~~~~~lp~~~~~~~G~~~~n~ 230 (345)
T PRK13499 154 AGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA---LGVDPLYAALPSYVVIMGGGAITNL 230 (345)
T ss_pred hhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh---cCCCchHHHHHHHHHHHHHHHHHHH
Confidence 332 1 12589999999999999999 44333211 13344433333322 22222211
Q ss_pred HHHHh---cCccc--ccc-cc----ccccchHHhHHHHHHHHHHHHHHHHHhhcchhh----hhhhhhhhhHHHhhhhHh
Q 021029 195 PWIFL---EKPKM--DAL-ET----WHFPPLMLTLNCLCTFALNLSVFLVISHTSALT----IRVAGVVKDWVVVLFSAL 260 (318)
Q Consensus 195 ~~~~~---~~~~~--~~~-~~----~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~----~s~~~~l~~v~~~l~~~~ 260 (318)
..-.. ..... ..+ .. +.....+..++|+.-+..+..+...-++.+... ..+.+.+.-+++.+.|.
T Consensus 231 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi- 309 (345)
T PRK13499 231 GFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL- 309 (345)
T ss_pred HHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-
Confidence 11011 11111 111 11 011123456666666666666666556553322 22444666688899998
Q ss_pred hcCCcccc------hhHHHHHHHHHHHHHHHhhc
Q 021029 261 LFADTKLT------IINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 261 ~~~e~~~s------~~~~~G~~lii~g~~~~~~~ 288 (318)
+++|. =+ ...++|+++++.|..+....
T Consensus 310 ~lkE~-K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 310 VLKEW-KGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhhhc-cCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 59998 44 56799999999998876654
No 57
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.01 E-value=0.0002 Score=63.88 Aligned_cols=124 Identities=10% Similarity=0.053 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHH
Q 021029 156 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVI 235 (318)
Q Consensus 156 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~ 235 (318)
+...+++++|...++. ..|.....+....+.+...+......... ... .. .++..+...|++....+...+.++
T Consensus 13 ~~~~~~~~NK~~l~~~---~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~g~~~~~~~~~~~~~l 86 (302)
T TIGR00817 13 LNVYFNIYNKKLLNVF---PYPYFKTLISLAVGSLYCLLSWSSGLPKR-LKI-SS-ALLKLLLPVAIVHTIGHVTSNVSL 86 (302)
T ss_pred HHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCC-CH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556778777642 26788888777766555433311111111 111 11 122334445555555566778889
Q ss_pred hhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 236 SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 236 ~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
+++++...++...+.|++..++++++++|+ ++..++.|.+++++|+....
T Consensus 87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~-~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQE-FPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HhccHHHHHHHHhcchHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999 99999999999999997653
No 58
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.93 E-value=0.00013 Score=55.10 Aligned_cols=71 Identities=21% Similarity=0.213 Sum_probs=58.0
Q ss_pred HhHHHHHHH-HHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 217 LTLNCLCTF-ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 217 ~~~~~v~~~-~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
.+..+++.. ..+...+.+.++.++ .......+.|++..++++++++|+ ++..+++|.+++..|+......+
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er-~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKER-LSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhhhh
Confidence 334344444 445566678899885 777889999999999999999999 99999999999999999877654
No 59
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.88 E-value=0.0001 Score=56.88 Aligned_cols=71 Identities=20% Similarity=0.135 Sum_probs=62.7
Q ss_pred HhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHH--HcccccchhHHHHHHHHhhhhhheecC
Q 021029 68 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVA--AGLEVMSCRMLLIMSVISFGVVVASYG 138 (318)
Q Consensus 68 ~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~--~l~ek~~~~~~~~i~l~~~Gv~~~~~~ 138 (318)
....-.++.+...+++.+++..+.+.+.-+.+..++.+.+.++. ++||+++..+++|+.+.+.|+.++..+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 33445678889999999999999999999999999889888885 899999999999999999999987654
No 60
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=3.4e-05 Score=67.19 Aligned_cols=66 Identities=14% Similarity=0.026 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 72 GAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 72 ~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
.+.+..+-..++.|+.+.|.+..+-+.++..+..++++..++|||+++.-.+|..+++.|-.++..
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 345677888999999999999999999999999999999999999999999999999999997765
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.84 E-value=0.00024 Score=63.06 Aligned_cols=131 Identities=13% Similarity=-0.016 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHH
Q 021029 146 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 225 (318)
Q Consensus 146 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 225 (318)
|.+++++++++|+...+..|+.. +.++.+... ..++..++.........+.. .....+...+.+|+.-.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-----g~~~~~~~~--~~~g~l~~~~~~~~~~~~~~----~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-----GGPYSQTLG--TTFGALILSIAIAIFVLPEF----WALSIFLVGLLSGAFWA 70 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-----CCHHHHHHH--HHHHHHHHHHHHHHHhCCcc----cccHHHHHHHHHHHHHH
Confidence 57899999999999999999874 235555542 33344443333222221111 11111233455555555
Q ss_pred HHHHHHHHHHhhcchhhhhhhhh-hhhHHHhhhhHhhcCCcccchhH----HHHHHHHHHHHHHHhhc
Q 021029 226 ALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLTIIN----LFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 226 ~~~~~~~~~~~~~~a~~~s~~~~-l~~v~~~l~~~~~~~e~~~s~~~----~~G~~lii~g~~~~~~~ 288 (318)
..|..++.++++.+....-...+ +.++.+.+++.++|||+ .+..+ ++|.++++.|+.+....
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEec
Confidence 56788888999998888766666 78889999999999999 99999 99999999998886544
No 62
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.83 E-value=0.00052 Score=61.31 Aligned_cols=130 Identities=15% Similarity=0.084 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHH
Q 021029 156 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVI 235 (318)
Q Consensus 156 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~ 235 (318)
++..+.+++|++.++....-.+..+++.+.....+...+.......+.... .. +.-....+++..+.......++
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~al 85 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRK-IP----LKKYAILSFLFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCc-Ch----HHHHHHHHHHHHHHHHHHHHHH
Confidence 334577888888876532224677777776666555444333222011111 11 1122333455556666677889
Q ss_pred hhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccc
Q 021029 236 SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 236 ~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~ 291 (318)
++.+-.+..+....+++...+++.++++++ .+..++++.+++.+|+......+.+
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~-y~~~~~~~v~li~~Gv~~~~~~~~~ 140 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKR-YSRRQYLSVLLITIGVAIFTLSDSS 140 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHhhHheeeecccc
Confidence 999999999999999999999999999999 9999999999999999998876543
No 63
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.82 E-value=0.00036 Score=60.18 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=102.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcC-ccccccccccccchHHhHH
Q 021029 142 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEK-PKMDALETWHFPPLMLTLN 220 (318)
Q Consensus 142 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~ 220 (318)
.+..|+++++.+-+.|+.--.+.|-+.+ .++.++..+-.+.+.+++......... .+..+...-+..+..+..+
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~-----~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLLEP-----LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT 78 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHcc-----CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence 3457999999999999999998888743 588999999888887776555443321 1111111111122334444
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 221 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 221 ~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
++.-..-.....++.+.-....+|.--++.|.+.+++|.++++|+ ++..|++..++..+|+..-...
T Consensus 79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkEr-ls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKER-LSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 444333333455578888999999999999999999999999999 9999999999999999766543
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.79 E-value=0.0011 Score=49.88 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=49.0
Q ss_pred HHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 230 SVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 230 ~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
....++++.+...+-....+.++...++|+++|||+ +|+.+++|..++++|+....
T Consensus 53 ~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~-ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 53 LWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEP-VSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHh
Confidence 344567888888888877899999999999999999 99999999999999997654
No 65
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.76 E-value=0.0019 Score=50.57 Aligned_cols=130 Identities=19% Similarity=0.240 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHH
Q 021029 147 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA 226 (318)
Q Consensus 147 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~ 226 (318)
.++++.+.++-+++..++.++.++.+ +|+...+.....+.+.+.+.....+.++....... .+....+|+++..
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g---s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~---p~w~~lGG~lG~~ 76 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG---SPLVASFISFGVGFILLLIILLITGRPSLASLSSV---PWWAYLGGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccC---ChHHhccHHHHHH
Confidence 57788899999999999999987532 68998888888888888777666655422222211 1333457888887
Q ss_pred HHHHHHHHHhhcchhhhhhhhhhh-hHHHhhhhHh-h---cCCcccchhHHHHHHHHHHHHH
Q 021029 227 LNLSVFLVISHTSALTIRVAGVVK-DWVVVLFSAL-L---FADTKLTIINLFGYGIAIAGVA 283 (318)
Q Consensus 227 ~~~~~~~~~~~~~a~~~s~~~~l~-~v~~~l~~~~-~---~~e~~~s~~~~~G~~lii~g~~ 283 (318)
.-......+++.++.........- -+.+.+++.+ . -+++ +++..++|.+++++|+.
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~-~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRP-FSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCC-CCHHHHHHHHHHHHHHh
Confidence 777777788999988777766654 4445666664 2 3355 99999999999999986
No 66
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.74 E-value=0.0008 Score=60.45 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCc-cccccccccccchHHhHHHHH
Q 021029 145 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP-KMDALETWHFPPLMLTLNCLC 223 (318)
Q Consensus 145 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~v~ 223 (318)
.+.+++-+-++|-+..++....+.++ +.+.+..+. ++....-.++..+........ .... .....++--++-+++
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs-~~~Y~~l~~vy~~~~~~r~~~~~~~~--~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQS-FFNYVLLALVYTPILLYRRGFKKWLK--VLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHH-HHHHHHHHHHHhhhhhhccccccchh--hcchhHHHHHHHHHH
Confidence 45555555666666666666666554 334444443 333322222222222221111 1111 111112222333677
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 224 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
=...|+....++++++.+...+.+...-++..++++++++++ +++.|++|++++++|+......
T Consensus 89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~r-y~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRR-YSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhheeee
Confidence 778899999999999999999999999999999999999999 9999999999999998876544
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.70 E-value=0.0022 Score=56.34 Aligned_cols=140 Identities=22% Similarity=0.166 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCc-cccccccccccchHHhHHH
Q 021029 143 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP-KMDALETWHFPPLMLTLNC 221 (318)
Q Consensus 143 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~ 221 (318)
...+....+..++.|+......|+..++ ..+...........+.... .+....+.. ....... .....+..+
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ 77 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLL-LPLLLLEPRGLRPALRP---WLLLLLLAL 77 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHH-HHHHHhhcccccccccc---hHHHHHHHH
Confidence 3467788888889999999999988763 2345555554554444432 222211110 1111111 123344445
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhH-hhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 222 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSA-LLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 222 v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~-~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
+.....+...+..++++++.......+..|++..+++. ++++|+ ++..++.|..+.+.|+.+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGER-LSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHheecCCC
Confidence 55555566677789999999999999999999999996 777999 999999999999999998876554
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.59 E-value=0.00051 Score=52.09 Aligned_cols=70 Identities=17% Similarity=0.108 Sum_probs=62.7
Q ss_pred HhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 68 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 68 ~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
.....++++....+...++++.|.+.+..+- ....+.+.+.+.++++|++++.+++++.+.++|++.+..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 3456677888999999999999999988884 789999999999999999999999999999999987754
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.39 E-value=0.0013 Score=49.17 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHhhhhhccchHHHHHHH-HHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 69 IPIGAMFAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 69 l~~~~~~~~~~~~~~~al~~~~~~~~~vl-~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
+..-+++.....+...+++..|.+.+..+ .....+.+.+.++++++|++++.+++++.+.+.|++....
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34566788888889999999999998888 4588999999999999999999999999999999997654
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.29 E-value=0.0018 Score=49.14 Aligned_cols=55 Identities=18% Similarity=0.370 Sum_probs=41.9
Q ss_pred HHhhcch-hhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 234 VISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 234 ~~~~~~a-~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
++++.+- ...++..-+-.+...+.|+++|||+ +|+.+++|+.+++.|+...+...
T Consensus 50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~-~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 50 AVKKIALGVAYALWEGIGILFITLFSVLLFDES-LSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHhhcCC
Confidence 4455433 3344444556677788999999999 99999999999999999886554
No 71
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.00014 Score=61.06 Aligned_cols=214 Identities=14% Similarity=0.120 Sum_probs=140.9
Q ss_pred CCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHH----HHHHHHhhhhh
Q 021029 59 MTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRML----LIMSVISFGVV 133 (318)
Q Consensus 59 ~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~----~~i~l~~~Gv~ 133 (318)
.+.+.+. --++.|+...+++..++.|.++.+++.+.=+. .+.-+-+-+++.+.+||..+..+. .++++.++|+.
T Consensus 54 ~T~~~~i-v~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~ 132 (288)
T COG4975 54 LTLTIFI-VGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIY 132 (288)
T ss_pred cchhhHH-HHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhhe
Confidence 3455443 45667888999999999999999988876544 467788889999999998776664 46777888988
Q ss_pred heecCccc--------chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCcccc
Q 021029 134 VASYGEIN--------INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD 205 (318)
Q Consensus 134 ~~~~~~~~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 205 (318)
+-+..|.+ ..-.|....+.|.+.|-.|.+..+... .+.+....-++. +.++..+..-.... +.
T Consensus 133 lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~------v~g~saiLPqAi-GMv~~ali~~~~~~-~~- 203 (288)
T COG4975 133 LTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD------VDGLSAILPQAI-GMVIGALILGFFKM-EK- 203 (288)
T ss_pred EeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc------ccchhhhhHHHH-HHHHHHHHHhhccc-cc-
Confidence 88775531 123688888899999999999888863 355555444432 22222222211111 00
Q ss_pred ccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhH----HHHHHHHHHH
Q 021029 206 ALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIIN----LFGYGIAIAG 281 (318)
Q Consensus 206 ~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~----~~G~~lii~g 281 (318)
..+...++-...|+.-...|...+.+-++.+-.+.=...-+--+.+.+-|.++++|+ =|..+ ++|+++++.|
T Consensus 204 ---~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ek-KtkkEm~~v~iGiilivvg 279 (288)
T COG4975 204 ---RFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEK-KTKKEMVYVIIGIILIVVG 279 (288)
T ss_pred ---chHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEecc-CchhhhhhhhhhHHHHHHH
Confidence 111111233344444445566666666666655554556667788899999999999 66665 5788888887
Q ss_pred HHHHh
Q 021029 282 VAAYN 286 (318)
Q Consensus 282 ~~~~~ 286 (318)
..+..
T Consensus 280 ai~lg 284 (288)
T COG4975 280 AILLG 284 (288)
T ss_pred hhhhh
Confidence 76543
No 72
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.23 E-value=0.0031 Score=46.66 Aligned_cols=69 Identities=22% Similarity=0.108 Sum_probs=59.9
Q ss_pred HhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhee
Q 021029 68 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 68 ~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
.+...+++.....+...+++..|.+.+..+= ....+.+.+.+++++||++++.+++++.+.+.|++...
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3445667888889999999999999976655 58899999999999999999999999999999998764
No 73
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.22 E-value=0.0032 Score=46.88 Aligned_cols=68 Identities=15% Similarity=-0.034 Sum_probs=58.8
Q ss_pred HhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhe
Q 021029 68 VIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 135 (318)
Q Consensus 68 ~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~ 135 (318)
.....+++.....+...+++++|.+.+..+- ....+.+.+.+++++||++++.+++++.+.+.|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4445667778888999999999999976655 5888999999999999999999999999999999864
No 74
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.22 E-value=0.0012 Score=56.92 Aligned_cols=76 Identities=24% Similarity=0.208 Sum_probs=67.5
Q ss_pred hHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccc
Q 021029 215 LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 215 ~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~ 291 (318)
......+++....|...+.++++.+|.+..+....|.++..++++++++++ ++..||++..+...|+...+.....
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~-ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRR-LSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcc-cchhhHHHHHHHHHHHheeecCCcc
Confidence 345566777777788899999999999999999999999999999999999 9999999999999999998776543
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.18 E-value=0.0032 Score=46.25 Aligned_cols=70 Identities=23% Similarity=0.182 Sum_probs=59.8
Q ss_pred HhHHHHHHHHHHHHhhhhhccchHHHHHHH-HHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 68 VIPIGAMFAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 68 ~l~~~~~~~~~~~~~~~al~~~~~~~~~vl-~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
.+...+++.....+.-.+++++|.+.+..+ ...-.+.+.+.++++++|+.+..+++++.+.+.|++..-.
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 444566778888889999999999986554 5688999999999999999999999999999999986543
No 76
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.04 E-value=0.002 Score=55.45 Aligned_cols=132 Identities=13% Similarity=0.054 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHH
Q 021029 146 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 225 (318)
Q Consensus 146 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 225 (318)
|++.+++|+++++...|=.||.-. .|+.....++.....+.-++.....+.+... .+..++|.+-.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~-----gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~---------p~amlgG~lW~ 66 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT-----GDGFFFQWVMCSGIFLVGLVVNLILGFPPFY---------PWAMLGGALWA 66 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC-----CCcHHHHHHHHHHHHHHHHHHHHhcCCCcce---------eHHHhhhhhhh
Confidence 567889999999999999998743 2666655555443333333333333332211 22344444444
Q ss_pred HHHHHHHHHHhhcc-hhhhhhhhhhhhHHHhhhhHh-hcCCcc----cchhHHHHHHHHHHHHHHHhhcccc
Q 021029 226 ALNLSVFLVISHTS-ALTIRVAGVVKDWVVVLFSAL-LFADTK----LTIINLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 226 ~~~~~~~~~~~~~~-a~~~s~~~~l~~v~~~l~~~~-~~~e~~----~s~~~~~G~~lii~g~~~~~~~~~~ 291 (318)
..|.+..-.++..+ +.-..+.+...-+.+...|-+ +||+++ -.+.+++|++++++|...+...|.+
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 44554444555544 234445555566666666644 565432 4577999999999999998866543
No 77
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.95 E-value=0.012 Score=52.97 Aligned_cols=138 Identities=14% Similarity=0.050 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHH--HHHHH--HHHhcCccccccccccc-cchHH
Q 021029 143 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSAL--CLFIP--WIFLEKPKMDALETWHF-PPLML 217 (318)
Q Consensus 143 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~~~~~~~~~-~~~l~ 217 (318)
...|+++.+++++|++.+.+-+|| .++ -++|.. |- ..+.. ++.+. ..+.++.......+.+. .+...
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~-----w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~ 76 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKK-----WSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPV 76 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCC-----CchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHH
Confidence 357999999999999999999998 442 234433 33 11111 11121 11122111111121221 22445
Q ss_pred hHHHHHHHHHHHHHHHHHhhcch-hhhhhhhhhhhHHHhhhhHhhcCCccc---c----hhHHHHHHHHHHHHHHHhhcc
Q 021029 218 TLNCLCTFALNLSVFLVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKL---T----IINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 218 ~~~~v~~~~~~~~~~~~~~~~~a-~~~s~~~~l~~v~~~l~~~~~~~e~~~---s----~~~~~G~~lii~g~~~~~~~~ 289 (318)
+++|++-..-|..++..+++.+- ....+..-+.-+.+.+++.+++||- . + ..-++|.++++.|+.+..+..
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew-~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNF-DVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccc-ccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 56666666667778888888765 4445555577888899999999975 3 2 346889999999999888743
No 78
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.93 E-value=0.0064 Score=45.44 Aligned_cols=54 Identities=19% Similarity=0.200 Sum_probs=40.6
Q ss_pred Hhhcch-hhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 235 ISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 235 ~~~~~a-~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
+++.+- ...++..-+..+...+.|+++|||+ +|+.+++|+.+++.|+...+...
T Consensus 51 l~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~-~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 51 LAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhcCC
Confidence 444433 3334444455666688999999999 99999999999999999986543
No 79
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.86 E-value=0.071 Score=41.89 Aligned_cols=139 Identities=13% Similarity=0.077 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHH
Q 021029 144 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC 223 (318)
Q Consensus 144 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 223 (318)
++..++++++.++-..+.-++.++.+..+ +|..........+.+.+.......+...... ...... +....+|++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~---spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~~~~~p-wW~~~GG~l 78 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG---SPLLASLISFLVGTVLLLILLLIKQGHPGLA-AVASAP-WWAWIGGLL 78 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-hccCCc-hHHHHccch
Confidence 45678899999999999999999877533 6777777777777777766655544432222 111111 233445566
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhh-hhhhHHHhhhhHhhcC----CcccchhHHHHHHHHHHHHHHHhhc
Q 021029 224 TFALNLSVFLVISHTSALTIRVAG-VVKDWVVVLFSALLFA----DTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~a~~~s~~~-~l~~v~~~l~~~~~~~----e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
+..+-........+.++.+..... .-+-+.+.+++.+=+. .+ ++...++|++++++|+...+..
T Consensus 79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~-~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRP-LNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCC-CCHHHHHHHHHHHHHHHHhccc
Confidence 666655555566777765554443 3455555666654333 44 9999999999999996665543
No 80
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.83 E-value=0.039 Score=41.11 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=41.3
Q ss_pred HHhhcch-hhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 234 VISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 234 ~~~~~~a-~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
++|+.+- +..++..-+-.+...+.|+++|||+ +|+.+++|+.+++.|+...+
T Consensus 55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~-~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQR-LNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhc
Confidence 4555443 4456666666777788999999999 99999999999999998754
No 81
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.73 E-value=0.0065 Score=44.03 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHhhhhhccchHHHHHHH-HHHHHHHHHHHHHHHcccccchhHHHHHHHH
Q 021029 69 IPIGAMFAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVI 128 (318)
Q Consensus 69 l~~~~~~~~~~~~~~~al~~~~~~~~~vl-~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~ 128 (318)
.....++.....+...+++++|.+.+..+ .+...+.+.+.+.+++||+++..+++++.+.
T Consensus 33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33445788888999999999999998655 5699999999999999999999999998763
No 82
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.66 E-value=0.023 Score=48.25 Aligned_cols=101 Identities=9% Similarity=0.037 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHH-HHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHH
Q 021029 30 GLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAM-FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFIL 108 (318)
Q Consensus 30 ~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~ 108 (318)
.=+..-+.+++++.+++-..... +.-+++.. .-.-+..+++ ......+-..++...|...+.++.++.|.+.++.
T Consensus 178 ~g~a~gm~vAaviv~Pig~~~ag---~~l~~p~l-l~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~ 253 (292)
T COG5006 178 AGVAVGMLVAALIVLPIGAAQAG---PALFSPSL-LPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALS 253 (292)
T ss_pred hHHHHHHHHHHHHHhhhhhhhcc---hhhcChHH-HHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHH
Confidence 44455566666666665432111 11111221 1112222322 3346677888999999999999999999999999
Q ss_pred HHHHcccccchhHHHHHHHHhhhhhh
Q 021029 109 GVAAGLEVMSCRMLLIMSVISFGVVV 134 (318)
Q Consensus 109 ~~~~l~ek~~~~~~~~i~l~~~Gv~~ 134 (318)
++++++|.+|..||+++...+.+..-
T Consensus 254 G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 254 GLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999987776653
No 83
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.59 E-value=0.019 Score=42.18 Aligned_cols=54 Identities=20% Similarity=0.333 Sum_probs=42.7
Q ss_pred HHhhcch-hhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 234 VISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 234 ~~~~~~a-~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
++|+.+- +..++..-.-.+...+.|+++|||+ ++..+++|+.++++|+...+..
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~-l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGES-LSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCc-CCHHHHHHHHHHHHHHHHhhhc
Confidence 4555443 4456666666777789999999999 9999999999999999987654
No 84
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.59 E-value=0.01 Score=52.77 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=79.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHH
Q 021029 142 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC 221 (318)
Q Consensus 142 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 221 (318)
+...|+.++++++++.+...+++|+-..|.+. ++..-- .. .. .....+.| +.....-
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~--~~~~~~--~~--------~~-------~~l~~~~W----~~G~~~~ 60 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR--GSLRAG--SG--------GR-------SYLRRPLW----WIGLLLM 60 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccccc--ch--------hh-------HHHhhHHH----HHHHHHH
Confidence 34689999999999999999999998765431 000000 00 00 00000111 1111111
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 222 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 222 v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
+.+... .+.++...++...+..+.+.-++..+++..+++|+ ++...++|..+++.|....-.
T Consensus 61 ~~g~~~---~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~-~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 61 VLGEIL---NFVALGFAPASLVAPLGALSLVFNAVLARFFLGEK-LTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred hcchHH---HHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhccc-chHhHHhhHHHHHhhheeeEE
Confidence 222222 33457788888888889999999999999999999 999999999999999876543
No 85
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.59 E-value=0.017 Score=42.74 Aligned_cols=53 Identities=9% Similarity=0.144 Sum_probs=42.4
Q ss_pred HHhhcch-hhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 234 VISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 234 ~~~~~~a-~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
++|+.+- +..++..-+-.+...+.|+++|||+ +|+.+++|+.+++.|+...+.
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~-~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGES-ASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHhhhc
Confidence 4555443 4556666667777889999999999 999999999999999988654
No 86
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.52 E-value=0.00057 Score=58.12 Aligned_cols=134 Identities=12% Similarity=0.140 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHH
Q 021029 145 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT 224 (318)
Q Consensus 145 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 224 (318)
.|.++..++ .++....+..++....+ |.+.-..-.+.-.+...|.....-.+-..+. .-. -.+++-|+.+
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~~~v~gp~-g~R---~~LiLRg~mG 107 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYMQPVIGPE-GKR---KWLILRGFMG 107 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEeeeeecCC-CcE---EEEEeehhhh
Confidence 577777777 77777788888877643 3333322211111111111111000000000 000 1123345555
Q ss_pred HHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 225 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
+..-+..|+++++.+-..+.++....|++.++++|.+++|+ .|....+|..+.+.|+.+..+.+
T Consensus 108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~-~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEP-FTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCC-CcHHHHHHHHHhhheEEEEecCC
Confidence 55555566778888888899999999999999999999999 99999999999999999877654
No 87
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.41 E-value=0.13 Score=45.87 Aligned_cols=138 Identities=16% Similarity=0.177 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcC-c---cc-ccc--ccccc--cchHHhH
Q 021029 149 YQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEK-P---KM-DAL--ETWHF--PPLMLTL 219 (318)
Q Consensus 149 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---~~-~~~--~~~~~--~~~l~~~ 219 (318)
..++..+-.+......|...++++.+..|....+..=.+-.++.... .+.|. . .. ... ..+.. ....+..
T Consensus 19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v 97 (345)
T KOG2234|consen 19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFL-LLFEERKYAKKSLKSLSKEILAAPRETLKVSV 97 (345)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence 33333344444444444433333345667766665555444433322 33332 1 11 111 11111 2244555
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 220 NCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 220 ~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
.+.+....|...+.+.++.+|.+..+...+|-....++++++++++ ++..||....+...|+...+..
T Consensus 98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rk-Ls~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRK-LSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHhcc
Confidence 6667777787888899999999999999999999999999999999 9999999999999999998843
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.03 E-value=0.02 Score=42.80 Aligned_cols=63 Identities=22% Similarity=0.109 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhe
Q 021029 73 AMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 135 (318)
Q Consensus 73 ~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~ 135 (318)
+++..+...+++.++..+.|.+.-+. ++.=+++++.++++.+|..++++++|+.+.+.|+.+.
T Consensus 49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 34555667788899999999988885 8899999999999988888999999999999999864
No 89
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.03 E-value=0.06 Score=46.75 Aligned_cols=111 Identities=11% Similarity=0.069 Sum_probs=71.2
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhh-hhhHHH
Q 021029 176 NPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGV-VKDWVV 254 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~-l~~v~~ 254 (318)
+|.+....+..-+.++. +...+...+....+ ...+...+.+|++-..-|..++...++.+-..+..... ++-+..
T Consensus 11 ~~~~Q~lG~t~Gali~a-lv~~~~~~p~~~~~---~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~ 86 (269)
T PF06800_consen 11 KPANQILGTTIGALIFA-LVVFLFRQPAFSMS---GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGT 86 (269)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHHHhCCCcchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHH
Confidence 66666666655444443 33333333333210 11224556677777777888888888887766655554 556667
Q ss_pred hhhhHhhcCCcccchhHH----HHHHHHHHHHHHHhhcccc
Q 021029 255 VLFSALLFADTKLTIINL----FGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 255 ~l~~~~~~~e~~~s~~~~----~G~~lii~g~~~~~~~~~~ 291 (318)
.++++++|||. -+..++ ++.++++.|+.+-.+.+++
T Consensus 87 sl~gv~~fgEW-~~~~~~~~G~~Al~liiiGv~lts~~~~~ 126 (269)
T PF06800_consen 87 SLIGVLFFGEW-TTTTQKIIGFLALVLIIIGVILTSYQDKK 126 (269)
T ss_pred HHHHHhhcCCC-CCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence 89999999998 666554 4788888999887776544
No 90
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.88 E-value=0.048 Score=46.27 Aligned_cols=65 Identities=9% Similarity=-0.021 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhh
Q 021029 70 PIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 134 (318)
Q Consensus 70 ~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~ 134 (318)
...+..+....+..+.++|.+.....+...+.++++.+++.++++|+++..++.|+.+.+.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 34455666667788999999999999999999999999999999999999999999999988753
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.78 E-value=0.22 Score=38.86 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=76.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHH-HHHHH
Q 021029 27 FPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAI-MPVAV 105 (318)
Q Consensus 27 ~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~-~pv~~ 105 (318)
.|+.-++.-+..+.+.+..+....++.+.+ +. ++.++ .....|++-.....+........+++....+.-+ .-+..
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~-~~-~~~p~-w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~s 105 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLA-SL-SSVPW-WAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIAS 105 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccc-hh-ccCCh-HHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 499999999999999888777666543211 11 11122 3444778878888888889999988888777654 55556
Q ss_pred HHHHHH----HcccccchhHHHHHHHHhhhhhh
Q 021029 106 FILGVA----AGLEVMSCRMLLIMSVISFGVVV 134 (318)
Q Consensus 106 ~l~~~~----~l~ek~~~~~~~~i~l~~~Gv~~ 134 (318)
.++..+ ..|++++.+|.+++.+.+.|+.+
T Consensus 106 l~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 106 LLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 666664 45789999999999999999864
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.54 E-value=0.012 Score=52.40 Aligned_cols=120 Identities=10% Similarity=-0.015 Sum_probs=90.5
Q ss_pred chhhcccCcccCCchHHHHHHHHHHHHHHHH-HHHHHhhcccc----CCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhcc
Q 021029 14 MQWVLSSKEINFPFPLGLTLLHMVFSSVLCF-LLTKVFKVMKV----EDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLY 88 (318)
Q Consensus 14 ~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~ 88 (318)
.|.++++++.+.+ ++.+..++--++...++ |+.......+. ....+.. ....+..+++..+.+...+..+..
T Consensus 182 ~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~sv~~f~~Nls~f~~ig~ 258 (316)
T KOG1441|consen 182 SKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT--FLILLLNSVLAFLLNLSAFLVIGR 258 (316)
T ss_pred HHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh--hHHHHHHHHHHHHHHHHHHHHHcc
Confidence 5666654566777 88998888888888888 76543222111 1111222 223444457777788889999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhee
Q 021029 89 ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 89 ~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
+++-++++.....-+.+.+.++++++++.+..+.+|..++++|+.+-.
T Consensus 259 tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 259 TSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred cCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998643
No 93
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.21 E-value=0.11 Score=43.67 Aligned_cols=64 Identities=14% Similarity=0.063 Sum_probs=55.3
Q ss_pred HHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccch
Q 021029 228 NLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 228 ~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
......++++.+--+.-+-.+-+|+-..++|+++.+.+ .+|..++-..+|++|+.++.+.++|.
T Consensus 99 MVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~Ks-Y~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 99 MVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKS-YHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HHhccchhcccCCcHHHhcccCCCcceeeeehhhhccc-ccHHHHHHHHHHHHHHHHhhcccccc
Confidence 44566678888877888888999999999999999999 99999999999999999988876553
No 94
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.51 E-value=0.12 Score=45.12 Aligned_cols=120 Identities=8% Similarity=-0.050 Sum_probs=87.2
Q ss_pred ccchhhcccCcccCCchHHHHHHHHHHHHHHHHHHHHHhhccccCCC--CCHHHHHHHHhHHHHHHHHHHHHhhhhhccc
Q 021029 12 SKMQWVLSSKEINFPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDG--MTLEIYTTSVIPIGAMFAMTLWLGNTAYLYI 89 (318)
Q Consensus 12 ~~~K~~~~~~~~~~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~ 89 (318)
+.++.+++ .++.+ +..+.+.-=++.++.........+.....-. -..++..++++..+.+.+.++.+-+.-++.-
T Consensus 189 ~tQd~lf~--~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~F 265 (327)
T KOG1581|consen 189 ATQDSLFK--KYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERF 265 (327)
T ss_pred hHHHHHhc--cCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhc
Confidence 34666777 55665 6666665555555555544333332221100 0124556789999999999999999999987
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhh
Q 021029 90 SVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 134 (318)
Q Consensus 90 ~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~ 134 (318)
++-..+++..+-=++.++++.++.+.+.++.+|.++.+.+.|+..
T Consensus 266 Gslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 266 GSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 887888888888999999999999999999999999998888764
No 95
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=93.97 E-value=0.18 Score=36.49 Aligned_cols=47 Identities=17% Similarity=0.245 Sum_probs=24.3
Q ss_pred HHHHHhhcchhh-hhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHH
Q 021029 231 VFLVISHTSALT-IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIA 278 (318)
Q Consensus 231 ~~~~~~~~~a~~-~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~li 278 (318)
...++++.+... ..+..-+..+...+.|+++|||+ +|+.+++|+.++
T Consensus 46 l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~-~s~~~~~gi~lI 93 (93)
T PF00893_consen 46 LSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGES-LSLSKWLGIGLI 93 (93)
T ss_dssp HHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHhheeeC
Confidence 334567665533 35556677788889999999999 999999999875
No 96
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.02 E-value=1.9 Score=33.97 Aligned_cols=110 Identities=14% Similarity=0.020 Sum_probs=68.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHH
Q 021029 25 FPFPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPV 103 (318)
Q Consensus 25 ~~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv 103 (318)
..+|+.-.+.-+.++...+..+... ++.++.....++.++ .....|++-+..............++...++. +-.-+
T Consensus 31 ~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pw-W~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli 108 (150)
T COG3238 31 LGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPW-WAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLI 108 (150)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCch-HHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHH
Confidence 3359999999999988888777765 333322222223233 23344555555555555666666666655554 34455
Q ss_pred HHHHHHHHHc----ccccchhHHHHHHHHhhhhhhee
Q 021029 104 AVFILGVAAG----LEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 104 ~~~l~~~~~l----~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
.-+++..+=+ +++++..+++++++.++|+.++.
T Consensus 109 ~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 109 MGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 5555554433 36899999999999999965543
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=92.68 E-value=0.18 Score=42.75 Aligned_cols=131 Identities=9% Similarity=0.033 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHHHHHH
Q 021029 146 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF 225 (318)
Q Consensus 146 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~ 225 (318)
+++.+++=++.|+.......|... +|.+....+.+-+.++. +..++...|.. .+. .+..-+.+|..-.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG------~p~qQ~lGtT~GALifa-iiv~~~~~p~~----T~~-~~iv~~isG~~Ws 70 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG------KPYQQTLGTTLGALIFA-IIVFLFVSPEL----TLT-IFIVGFISGAFWS 70 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC------ChhHhhhhccHHHHHHH-HHHheeecCcc----chh-hHHHHHHhhhHhh
Confidence 567888889999987777766533 66666666655444443 33332222211 111 1133445555555
Q ss_pred HHHHHHHHHHhhcchhhhhhhhh-hhhHHHhhhhHhhcCCcccchhHH----HHHHHHHHHHHHHhhcc
Q 021029 226 ALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLTIINL----FGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 226 ~~~~~~~~~~~~~~a~~~s~~~~-l~~v~~~l~~~~~~~e~~~s~~~~----~G~~lii~g~~~~~~~~ 289 (318)
.-|..++.+.+..+...+....+ .+-+-+.+++++.|||. .+..++ +.+++++.|+++..+.+
T Consensus 71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG~~lTs~~~ 138 (288)
T COG4975 71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIGIYLTSKQD 138 (288)
T ss_pred hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHhheEeeeec
Confidence 55777888888877666665554 45566689999999999 887764 35566777777655443
No 98
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.34 E-value=0.17 Score=45.52 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=64.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 216 MLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 216 l~~~~~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
+.+.-+.+-+..|+....++++++.....+..+....+...++.++-+|+ +|+...++.++.++|+++.+...-
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~-ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVER-FTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcch-hhHHHHHHHHHhhccEEEEEeccc
Confidence 34455667778888888899999999999999999999999999999999 999999999999999998876643
No 99
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.43 E-value=4.1 Score=36.61 Aligned_cols=138 Identities=12% Similarity=0.073 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHH-hhHHHHHHHHHHHH-HhcCccccc-ccccc--ccchHHh
Q 021029 144 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYY-VSPCSALCLFIPWI-FLEKPKMDA-LETWH--FPPLMLT 218 (318)
Q Consensus 144 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~~~~~-~~~~~--~~~~l~~ 218 (318)
..|+++-.+++++.+.+.+-.||..+ =+||.... +.+++- +.+|+.. ..+.|+..+ ....+ ..+...+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~------WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l 78 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG------WSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFL 78 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC------ccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence 57999999999999999999999732 23343322 233332 3334432 233333321 11111 1111122
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-hhhhhhhhhhhhHHHhhhhHhhc-------CCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 219 LNCLCTFALNLSVFLVISHTS-ALTIRVAGVVKDWVVVLFSALLF-------ADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 219 ~~~v~~~~~~~~~~~~~~~~~-a~~~s~~~~l~~v~~~l~~~~~~-------~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
++...+.. ....=..+++.+ +...++..-+-.+++.++-.++. +++ -....++|.++++.|+....+...
T Consensus 79 ~G~lWGIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~-~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 79 FGVLWGIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATP-SGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred HHHHHhcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCC-CchhhhhHHHHHHHHHHHHhHHHH
Confidence 22222221 111112355543 23344444444455555544432 233 345689999999999998876643
No 100
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=89.97 E-value=14 Score=33.24 Aligned_cols=223 Identities=12% Similarity=0.033 Sum_probs=123.1
Q ss_pred HHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcc-------cccchhHHHHHHHHhhhhhhee
Q 021029 65 TTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGL-------EVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 65 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~-------ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
+......|++.+.+...+-.+.+|+..+..+-+. .++.++-.++-.++.+ ++-....+++++++++|+++..
T Consensus 73 l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g 152 (344)
T PF06379_consen 73 LFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG 152 (344)
T ss_pred HHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence 3456677888888889999999998888765443 4444444444444433 2334578899999999999865
Q ss_pred c----Cc-------ccch-HHHHHHHHHHHHHHHHHHHHHHHHhh--h--cCCCCChHHHH----HHhhHHHHHHHHHHH
Q 021029 137 Y----GE-------ININ-WIGVVYQMGGVVGEALRLIFMEILVK--R--KGLKLNPISVM----YYVSPCSALCLFIPW 196 (318)
Q Consensus 137 ~----~~-------~~~~-~~G~~~~l~s~~~~a~~~v~~~~~~~--~--~~~~~~~~~~~----~~~~~~~~~~l~~~~ 196 (318)
. +| .+++ -.|.+.++.|.+..|+.+.-.+.-.+ + .....+|.... .....-+.+.-+...
T Consensus 153 ~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc 232 (344)
T PF06379_consen 153 KAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYC 232 (344)
T ss_pred HHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHH
Confidence 3 11 1222 37999999999999988776554211 0 00112222211 111111222222222
Q ss_pred HHh--cCcccc---ccc----cccccchHHhHHHHHHHHHHHHHHHHHhhcc----hhhhhhhhhhhhHHHhhhhHhhcC
Q 021029 197 IFL--EKPKMD---ALE----TWHFPPLMLTLNCLCTFALNLSVFLVISHTS----ALTIRVAGVVKDWVVVLFSALLFA 263 (318)
Q Consensus 197 ~~~--~~~~~~---~~~----~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~----a~~~s~~~~l~~v~~~l~~~~~~~ 263 (318)
... ...+.. +.. .+........+.|+.-+...+.+-+.-.+.+ ...-.+.+.+.-+++-+.|. .++
T Consensus 233 ~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl-~lk 311 (344)
T PF06379_consen 233 LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL-ILK 311 (344)
T ss_pred HHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH-HHH
Confidence 211 111110 110 1111123455556655554444333333333 45556667777777778875 466
Q ss_pred Ccc-----cchhHHHHHHHHHHHHHHHhhc
Q 021029 264 DTK-----LTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 264 e~~-----~s~~~~~G~~lii~g~~~~~~~ 288 (318)
|-+ .-...++|+++++.++...-+.
T Consensus 312 EWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 312 EWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 643 2345688999888888765543
No 101
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=88.87 E-value=0.26 Score=40.37 Aligned_cols=64 Identities=14% Similarity=0.170 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 226 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 226 ~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
+.|+.+..++++.+|+.++....-...+..+++++++||+ +....++..++.+.|+....+..+
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~-~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDR-FMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccc-hhhhhHHHHHHHhCcEEEEEeccc
Confidence 3467777789999999999999999999999999999999 999999999999999887765443
No 102
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=86.55 E-value=7.6 Score=32.73 Aligned_cols=100 Identities=7% Similarity=-0.011 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccC---CCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHH
Q 021029 30 GLTLLHMVFSSVLCFLLTKVFKVMKVE---DGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF 106 (318)
Q Consensus 30 ~l~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~ 106 (318)
.-.++.=+++..+++.+......+... ..++ .+.+..+++-|++-.+..++.-|.+.-++...++++.++.-....
T Consensus 187 dtmfYnNllslPiL~~~s~~~edws~~n~annl~-~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~a 265 (309)
T COG5070 187 DTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIA 265 (309)
T ss_pred hHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC-hHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHH
Confidence 344555555666655555444433321 1222 222445667778888888888899999999999999998888888
Q ss_pred HHHHHHcccccchhHHHHHHHHhh
Q 021029 107 ILGVAAGLEVMSCRMLLIMSVISF 130 (318)
Q Consensus 107 l~~~~~l~ek~~~~~~~~i~l~~~ 130 (318)
+.+.+++.|..+...+.+++++++
T Consensus 266 laGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 266 LAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred HhhhhhcCCchhHHHHHHHHHHHH
Confidence 888888888888777777666443
No 103
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=83.14 E-value=1.4 Score=33.03 Aligned_cols=50 Identities=18% Similarity=0.160 Sum_probs=37.9
Q ss_pred HHhhcchhhhhh-hhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHH
Q 021029 234 VISHTSALTIRV-AGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA 284 (318)
Q Consensus 234 ~~~~~~a~~~s~-~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~ 284 (318)
.+++.+=..+.. .+.+.=++.++.++++.+|. .+...++|+++++.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~-~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEV-ISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcc-cchhHHHHHHHHHcCeee
Confidence 356655444333 35777788899998888887 899999999999999753
No 104
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=82.28 E-value=27 Score=30.65 Aligned_cols=65 Identities=22% Similarity=0.239 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHh
Q 021029 221 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 221 ~v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~ 286 (318)
+++-.......+..+..++|....+.--..-++.-+++.-+++.+ ++..||.|+..+..|+...-
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~t-i~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRT-ITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcc-cchhhHHHHHHHHhhhheee
Confidence 333333333445567888888888888888888999999999999 99999999999999987654
No 105
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.68 E-value=0.42 Score=42.22 Aligned_cols=120 Identities=14% Similarity=0.128 Sum_probs=80.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHHhcCccccccccccccchHHhHHH
Q 021029 142 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC 221 (318)
Q Consensus 142 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 221 (318)
++..|..+++.|++..+....+.||-.+|.+ . .... ..+++...- .. +.|+..++.-
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~----~---~~~r-------------a~~gg~~yl-~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAG----A---SGLR-------------AGEGGYGYL-KE--PLWWAGMLTM 74 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHh----h---hccc-------------ccCCCcchh-hh--HHHHHHHHHH
Confidence 4568999999999999998888888766421 0 0000 011111111 01 1223333333
Q ss_pred HHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhc
Q 021029 222 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 222 v~~~~~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~ 288 (318)
.++-..|+ .++...++.-.+..+.+.-+.+.+++..+++|+ +++.-.+|++++++|....-..
T Consensus 75 ~vGei~NF---aAYaFAPasLVtPLGAlsvi~saila~~~L~Ek-l~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 75 IVGEIANF---AAYAFAPASLVTPLGALSVIISAILASFFLKEK-LNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHhHhhH---HHHhhchHhhhccchhHHHHHHHHHHHHHHHHH-HHHhhhhheeEEecccEEEEEe
Confidence 33444444 346778888888889999999999999999999 9999999999999998765433
No 106
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=76.95 E-value=42 Score=27.91 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=17.1
Q ss_pred hhhHhhcCCcccchhHHHHHHHHHH
Q 021029 256 LFSALLFADTKLTIINLFGYGIAIA 280 (318)
Q Consensus 256 l~~~~~~~e~~~s~~~~~G~~lii~ 280 (318)
.+|..++++- .=+...+|..+.++
T Consensus 134 ~iG~~L~t~y-~l~fe~~silLLvA 157 (198)
T PRK06638 134 AIGILLFTDY-LLPFELASVLLLVA 157 (198)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4567777777 77778888777655
No 107
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=73.41 E-value=4 Score=29.89 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=25.3
Q ss_pred hhhhHhhcCCcccchhHHHHHHHHHHHHHH
Q 021029 255 VLFSALLFADTKLTIINLFGYGIAIAGVAA 284 (318)
Q Consensus 255 ~l~~~~~~~e~~~s~~~~~G~~lii~g~~~ 284 (318)
+.+++++++|+ +++.+..|.++++++++.
T Consensus 77 ~~Fsv~~l~E~-l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEP-LKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCC-ccHHHHHHHHHHHHhhhe
Confidence 46778899999 999999999999888764
No 108
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=72.92 E-value=34 Score=32.19 Aligned_cols=14 Identities=29% Similarity=0.235 Sum_probs=9.5
Q ss_pred ccccccCCCCCCCC
Q 021029 304 QTQLTATTTSSTSE 317 (318)
Q Consensus 304 ~~~~~~~~~s~~~~ 317 (318)
.++.++|.+|+++|
T Consensus 442 ~~~~~~~~~~~~~~ 455 (455)
T TIGR00892 442 RDKKDAEGDSRESE 455 (455)
T ss_pred ccccccccccccCC
Confidence 34456778888776
No 109
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=72.41 E-value=72 Score=28.51 Aligned_cols=132 Identities=11% Similarity=-0.008 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCChHHHHHHhhHHHHHHHHHHHHH--hcCccccccccccccchHHhHHHHHHHH
Q 021029 149 YQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIF--LEKPKMDALETWHFPPLMLTLNCLCTFA 226 (318)
Q Consensus 149 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~~ 226 (318)
.++.-+++..+-.+..|-.....+.+ .....+.+|++.+.+.+...-.. .+.+..+......+. -..++-++
T Consensus 16 sa~~Y~~sS~lm~vvNK~vls~y~f~-~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~-----P~~~lf~~ 89 (314)
T KOG1444|consen 16 SALFYCLSSILMTVVNKIVLSSYNFP-MGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWF-----PVSLLFVG 89 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHc-----cHHHHHHH
Confidence 33333444444555566666654321 22334457777666555433221 111111111111111 11222233
Q ss_pred HHHHHHHHHhhcchhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhh
Q 021029 227 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 227 ~~~~~~~~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~ 287 (318)
..+.....+++.+--...++..+.++...+....+++.. ++...+.....+++|...+..
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhcc
Confidence 333344457888888899999999999999999999998 999999999999999876653
No 110
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=69.84 E-value=9.1 Score=28.13 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC
Q 021029 99 AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG 138 (318)
Q Consensus 99 ~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~ 138 (318)
....+...+..+.+.|+||+...+++..++++|+.++...
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 4566677788999999999999999999999999987653
No 111
>PRK02237 hypothetical protein; Provisional
Probab=68.97 E-value=11 Score=27.78 Aligned_cols=45 Identities=16% Similarity=0.037 Sum_probs=36.2
Q ss_pred hhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 244 RVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 244 s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
+..+-.--+.++++++.+-|++ ++...++|..+++.|+....+.+
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~-Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVR-PDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcC-CChhHHHhHHHHHHhHHHheecC
Confidence 3344445567788999999999 99999999999999998776544
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=68.43 E-value=9.8 Score=27.97 Aligned_cols=45 Identities=20% Similarity=0.076 Sum_probs=36.7
Q ss_pred hhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 244 RVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 244 s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
+..+-.--+.++++++.+-+++ ++...++|..+++.|+....+.+
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~-Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVR-PDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcC-CChHHHHhHHHHHHhHHheEecC
Confidence 3344455677789999999999 99999999999999998876554
No 113
>PRK02237 hypothetical protein; Provisional
Probab=68.42 E-value=46 Score=24.63 Aligned_cols=39 Identities=8% Similarity=-0.024 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheec
Q 021029 99 AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 99 ~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
....+...+..+.+.++||+...+++..++++|+.++..
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 455666678899999999999999999999999987754
No 114
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=66.45 E-value=50 Score=24.32 Aligned_cols=61 Identities=16% Similarity=0.099 Sum_probs=39.2
Q ss_pred HHHHHHHhhhhhccchHHHHHHHHH-HHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhe
Q 021029 75 FAMTLWLGNTAYLYISVAFAQMLKA-IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 135 (318)
Q Consensus 75 ~~~~~~~~~~al~~~~~~~~~vl~~-~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~ 135 (318)
|.+..-.+-.+.+.-+.+.--+++= .+-..-..++.+++||++++....|.+..++++.++
T Consensus 45 Y~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 45 YCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3333344444555555555545543 233334567788999999999999999888777654
No 115
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=65.63 E-value=75 Score=26.10 Aligned_cols=26 Identities=15% Similarity=0.340 Sum_probs=18.6
Q ss_pred hhhHhhcCCcccchhHHHHHHHHHHHH
Q 021029 256 LFSALLFADTKLTIINLFGYGIAIAGV 282 (318)
Q Consensus 256 l~~~~~~~e~~~s~~~~~G~~lii~g~ 282 (318)
.+|..++.|- .-+....|..+.++=+
T Consensus 133 ~iG~~Lyt~Y-~l~fe~~s~lLLvAmI 158 (186)
T MTH00057 133 VLGRVLYTDY-YYLFILASFILLVAMI 158 (186)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 4577777877 7778888887766533
No 116
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=65.35 E-value=51 Score=28.89 Aligned_cols=113 Identities=7% Similarity=0.015 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccC----CCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHH
Q 021029 30 GLTLLHMVFSSVLCFLLTKVFKVMKVE----DGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAV 105 (318)
Q Consensus 30 ~l~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~ 105 (318)
-+.++...++..+++..+.+.+..-.- ...+++.+. ..+..+....++....-.-.+.-++.++..+...--..+
T Consensus 222 EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyG-y~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavT 300 (367)
T KOG1582|consen 222 EMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYG-YAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVT 300 (367)
T ss_pred eEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHH-HHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHH
Confidence 444455555555555444444432211 122344432 333333333333332222233456666777777777889
Q ss_pred HHHHHHHcccccchhHHHHHHHHhhhhhheecCcccch
Q 021029 106 FILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININ 143 (318)
Q Consensus 106 ~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~~~~~~ 143 (318)
.+++++++.++++....-+..+.+.|+.+-..++.+..
T Consensus 301 i~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~ 338 (367)
T KOG1582|consen 301 ILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKI 338 (367)
T ss_pred HHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence 99999999999999999999999999999877664433
No 117
>PF15471 TMEM171: Transmembrane protein family 171
Probab=63.68 E-value=8.1 Score=33.28 Aligned_cols=24 Identities=21% Similarity=0.383 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHhhcccch
Q 021029 269 IINLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 269 ~~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
..|++|-++++.|++++-....|+
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKK 184 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKK 184 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeee
Confidence 579999999999999987665443
No 118
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=61.07 E-value=96 Score=27.71 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=40.4
Q ss_pred hhhhccchHHHHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhe
Q 021029 83 NTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 135 (318)
Q Consensus 83 ~~al~~~~~~~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~ 135 (318)
+.-+..+++-+.++..--.-+.+.+++..+++++.+...|+|..++..|+..=
T Consensus 261 flLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 261 FLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 44444566555555555666778888999999999999999999999998865
No 119
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=60.52 E-value=65 Score=23.65 Aligned_cols=40 Identities=13% Similarity=-0.024 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhheecC
Q 021029 99 AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG 138 (318)
Q Consensus 99 ~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~~~ 138 (318)
....+...+..+++.++++++..|.+..+++.|+.++...
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 3456666778889999999999999999999999877653
No 120
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.30 E-value=15 Score=26.49 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=26.6
Q ss_pred hhhhHhhcCCcccchhHHHHHHHHHHHHHHH
Q 021029 255 VLFSALLFADTKLTIINLFGYGIAIAGVAAY 285 (318)
Q Consensus 255 ~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~ 285 (318)
+.+|++.++|+ +.+.++.|..++..|+...
T Consensus 84 v~Fsvfyl~ep-l~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEP-LRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCc-chHHHHHHHHHHHHHHHHh
Confidence 46789999999 9999999999999988764
No 121
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=54.45 E-value=1.5e+02 Score=25.82 Aligned_cols=100 Identities=6% Similarity=-0.069 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHHH
Q 021029 28 PLGLTLLHMVFSSVLCFLLTKVFKVMKVEDGMTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFI 107 (318)
Q Consensus 28 p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~l 107 (318)
++...++.+....+..+......+. ++ +....++.|.+++.++.+..-..+.+..+....+=++.-+.+.-
T Consensus 27 g~~fQw~~~~~i~~~g~~v~~~~~~----p~-----f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw 97 (254)
T PF07857_consen 27 GFFFQWVMCSGIFLVGLVVNLILGF----PP-----FYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGW 97 (254)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCC----Cc-----ceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHH
Confidence 7777777776555555444333221 11 12235567788999999999999999999999999886666654
Q ss_pred HHH-H-Hcc---c--ccchhHHHHHHHHhhhhhhee
Q 021029 108 LGV-A-AGL---E--VMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 108 ~~~-~-~l~---e--k~~~~~~~~i~l~~~Gv~~~~ 136 (318)
..- + +++ | +-.+..++|++++++|..+..
T Consensus 98 ~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 98 ASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred HHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 433 2 222 2 346778889999888888754
No 122
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=53.12 E-value=2.2e+02 Score=27.58 Aligned_cols=46 Identities=11% Similarity=-0.051 Sum_probs=20.8
Q ss_pred cchhhhhhhhhhhhHHHhhhhHhhcCCcccc-hhHHHHHHHHHHHHHH
Q 021029 238 TSALTIRVAGVVKDWVVVLFSALLFADTKLT-IINLFGYGIAIAGVAA 284 (318)
Q Consensus 238 ~~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s-~~~~~G~~lii~g~~~ 284 (318)
..+....+.....|+-+.+.|.+.-.-. .+ ...+.|+.+++.+.+.
T Consensus 344 v~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 344 VFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Confidence 3334444444456666666766532222 22 2234444444444443
No 123
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=47.37 E-value=22 Score=25.03 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=20.0
Q ss_pred cchhHHHHHHHHHHHHHHHhhcc
Q 021029 267 LTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 267 ~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
.++..++|.+++++|..+|....
T Consensus 5 ~~~~~iLgi~l~~~~~~Ly~lr~ 27 (84)
T PF07444_consen 5 FGPSYILGIILILGGLALYFLRF 27 (84)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999997543
No 124
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=45.82 E-value=6.8 Score=34.10 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHccccc-chhHHHHHHHHhhhhhheecCc--ccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 021029 92 AFAQMLKAIMPVAVFILGV-AAGLEVM-SCRMLLIMSVISFGVVVASYGE--ININWIGVVYQMGGVVGEALRLIFMEIL 167 (318)
Q Consensus 92 ~~~~vl~~~~pv~~~l~~~-~~l~ek~-~~~~~~~i~l~~~Gv~~~~~~~--~~~~~~G~~~~l~s~~~~a~~~v~~~~~ 167 (318)
+...++.+...+.++++-. +++|||. -..-.++++++++-+.+...-. .+.-+.|+++.+...+..-.-+.| -.+
T Consensus 50 ~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Y-m~l 128 (381)
T PF05297_consen 50 GALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFY-MWL 128 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 3344455544444443333 3345443 4444555555555444443322 222345655544443332222222 223
Q ss_pred hhhcCCCCChHHHHHHh
Q 021029 168 VKRKGLKLNPISVMYYV 184 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~ 184 (318)
.++. .-+.|+++.+.
T Consensus 129 Lr~~--GAs~WtiLaFc 143 (381)
T PF05297_consen 129 LREL--GASFWTILAFC 143 (381)
T ss_dssp -----------------
T ss_pred HHHh--hhHHHHHHHHH
Confidence 3322 33666666544
No 125
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=37.66 E-value=25 Score=21.25 Aligned_cols=16 Identities=19% Similarity=0.123 Sum_probs=7.3
Q ss_pred cchhHHHHHHHHHHHH
Q 021029 267 LTIINLFGYGIAIAGV 282 (318)
Q Consensus 267 ~s~~~~~G~~lii~g~ 282 (318)
++|..++=.++++.|+
T Consensus 2 p~wlt~iFsvvIil~I 17 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGI 17 (49)
T ss_pred chHHHHHHHHHHHHHH
Confidence 3455444444444444
No 126
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=37.21 E-value=29 Score=30.37 Aligned_cols=55 Identities=5% Similarity=-0.037 Sum_probs=44.4
Q ss_pred chhhhhhhhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcccchhh
Q 021029 239 SALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA 294 (318)
Q Consensus 239 ~a~~~s~~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~~~~~~ 294 (318)
+--.+-++-.-.++...+.++++.|.+ .+..|+...+++-+|+++.+..+.++.+
T Consensus 90 ~~PlHiIfRsgsll~nM~~g~il~~k~-Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~ 144 (330)
T KOG1583|consen 90 PMPLHIIFRSGSLLANMILGWILLGKR-YSLRQYSSVLMITIGIIICTLFSSKDGR 144 (330)
T ss_pred cceEEEEEecCcHHHHHHHHHHhccce-eehhhhhhHHhhhhhheeEEeecCcchh
Confidence 333455556667888899999999999 9999999999999999998877655433
No 127
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=36.71 E-value=51 Score=24.29 Aligned_cols=69 Identities=22% Similarity=0.149 Sum_probs=48.6
Q ss_pred HHhHHHHHHHHHHHHhhhhhccchHHHHHHHH-HHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhee
Q 021029 67 SVIPIGAMFAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS 136 (318)
Q Consensus 67 ~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~-~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~~ 136 (318)
+.+|..+ .-.+..++++-++..+.+.+.=+. +++-.|+.+.+..+-.|-...+..++..+.++|+.++.
T Consensus 55 Y~iPFll-NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 55 YLIPFLL-NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHH-HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 3344333 333446677778888877765444 56778888888887767778888899999999987653
No 128
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=36.50 E-value=24 Score=25.80 Aligned_cols=43 Identities=19% Similarity=0.037 Sum_probs=34.4
Q ss_pred hhhhhhHHHhhhhHhhcCCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 246 AGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 246 ~~~l~~v~~~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
.+-.--+.++++.+++=+.. ++.+.++|.+++++|+......+
T Consensus 64 YGGvyI~~sL~W~~~Vdg~~-pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 64 YGGVYIAASLAWLWVVDGVR-PDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hcchHHHHHHHHHHHHcCcC-CcHHHhhhHHHHHhceeeeEeCC
Confidence 34445667788889888998 99999999999999977665543
No 129
>PF15102 TMEM154: TMEM154 protein family
Probab=36.10 E-value=28 Score=27.28 Aligned_cols=22 Identities=14% Similarity=-0.026 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHhhcccchh
Q 021029 272 LFGYGIAIAGVAAYNNHKLKKE 293 (318)
Q Consensus 272 ~~G~~lii~g~~~~~~~~~~~~ 293 (318)
+++.+|++..++++.+.|+|+.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHHHHHheeEEeeccc
Confidence 5666666777777766655443
No 130
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=34.63 E-value=47 Score=21.74 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHhhcccchhhh
Q 021029 272 LFGYGIAIAGVAAYNNHKLKKEAS 295 (318)
Q Consensus 272 ~~G~~lii~g~~~~~~~~~~~~~~ 295 (318)
.+-+.+++.|++++.+.+.++++.
T Consensus 15 t~~~~l~fiavi~~ayr~~~K~~~ 38 (60)
T COG4736 15 TIAFTLFFIAVIYFAYRPGKKGEF 38 (60)
T ss_pred HHHHHHHHHHHHHHHhcccchhhH
Confidence 344567777888887776554443
No 131
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=33.58 E-value=3.3e+02 Score=23.84 Aligned_cols=23 Identities=17% Similarity=0.112 Sum_probs=12.7
Q ss_pred cccchhHHHHHHHHhhhhhheec
Q 021029 115 EVMSCRMLLIMSVISFGVVVASY 137 (318)
Q Consensus 115 ek~~~~~~~~i~l~~~Gv~~~~~ 137 (318)
+.....+.++-+..-.|++++..
T Consensus 58 ~~~~~~~lvg~~~F~~GLilVv~ 80 (265)
T COG2116 58 APGGLAKLVGGLVFSLGLILVVI 80 (265)
T ss_pred CCcchHHHHHHHHHHHHHHHhhh
Confidence 33444556666666666665443
No 132
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=32.71 E-value=2.1e+02 Score=22.92 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=38.1
Q ss_pred HHHHHHHcccccchhHHHHHHH-------HhhhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 021029 106 FILGVAAGLEVMSCRMLLIMSV-------ISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEIL 167 (318)
Q Consensus 106 ~l~~~~~l~ek~~~~~~~~i~l-------~~~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~ 167 (318)
=+...++.|..|+..+.+|+.+ ++.|+.+....+...-.-....++.+++.+++-.++...+
T Consensus 86 Qf~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~i 154 (193)
T COG4657 86 QFTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAI 154 (193)
T ss_pred HHHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHH
Confidence 3445566677888888888776 3456665554433222345667777777777766665444
No 133
>PRK10666 ammonium transporter; Provisional
Probab=32.64 E-value=4.3e+02 Score=24.94 Aligned_cols=53 Identities=8% Similarity=-0.182 Sum_probs=27.3
Q ss_pred HcccccchhHHHHHHHHhhhhhheecC-cccchHHHHHHHHHHHHHHHHHHHHHHH
Q 021029 112 AGLEVMSCRMLLIMSVISFGVVVASYG-EININWIGVVYQMGGVVGEALRLIFMEI 166 (318)
Q Consensus 112 ~l~ek~~~~~~~~i~l~~~Gv~~~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~~~ 166 (318)
+.++|++......-.+ .|+.-++.. +.-..+...+.+.++++..-....+.|+
T Consensus 273 ~~~gk~~~~~~~nG~L--aGLVaITa~a~~v~p~~A~iiG~vag~v~~~~~~~l~~ 326 (428)
T PRK10666 273 ALRGKPSLLGACSGAI--AGLVGVTPACGYVGVGGALIIGVVAGLAGLWGVTMLKR 326 (428)
T ss_pred HHhCCCCHHHHHHHHh--hhhhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456777655544433 444433332 2223455667777777665444444454
No 134
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=31.71 E-value=74 Score=17.57 Aligned_cols=18 Identities=17% Similarity=0.115 Sum_probs=10.1
Q ss_pred cchhHHHHHHHHHHHHHH
Q 021029 267 LTIINLFGYGIAIAGVAA 284 (318)
Q Consensus 267 ~s~~~~~G~~lii~g~~~ 284 (318)
-++..++|+.++..+.++
T Consensus 10 ~~~~~~~G~~l~~~~~~~ 27 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLL 27 (34)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 556677777444443333
No 135
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=31.20 E-value=3.5e+02 Score=25.36 Aligned_cols=39 Identities=5% Similarity=0.070 Sum_probs=17.1
Q ss_pred hhhHHHhhhhHhhc-CCcccchhHHHHHHHHHHHHHHHhhcc
Q 021029 249 VKDWVVVLFSALLF-ADTKLTIINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 249 l~~v~~~l~~~~~~-~e~~~s~~~~~G~~lii~g~~~~~~~~ 289 (318)
.-++.+++...++. ... ... ...+...+..|...|...+
T Consensus 389 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~y~~~~ 428 (445)
T PRK10644 389 AVTLIAFVYCIWAVVGSG-AKE-VMWSFVTLMVITAFYALNY 428 (445)
T ss_pred HHHHHHHHHHHHHHHHhh-HHH-HHHHHHHHHHHHHHHHHHH
Confidence 44555554443332 222 222 2333444555666664443
No 136
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=30.43 E-value=4.7e+02 Score=24.72 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHhhccc
Q 021029 270 INLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 270 ~~~~G~~lii~g~~~~~~~~~ 290 (318)
....|.++...|...|.+.++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~ 437 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARK 437 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456788888999887776544
No 137
>PRK10655 potE putrescine transporter; Provisional
Probab=30.36 E-value=3.6e+02 Score=25.17 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHhhcccch
Q 021029 270 INLFGYGIAIAGVAAYNNHKLKK 292 (318)
Q Consensus 270 ~~~~G~~lii~g~~~~~~~~~~~ 292 (318)
....|..+++.|...|...++|+
T Consensus 409 ~~~~~~~~~~~g~~~y~~~~~~~ 431 (438)
T PRK10655 409 AMLYGSIVTFLGWTLYGLISPRF 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34668888899988887655443
No 138
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=30.14 E-value=4.8e+02 Score=24.68 Aligned_cols=75 Identities=13% Similarity=0.114 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHh--hhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 021029 95 QMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVIS--FGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRK 171 (318)
Q Consensus 95 ~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~--~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~ 171 (318)
.++.-..++.+.++-=++.|.|+...|++=+.+++ .=+.+.+.++. -..+..+.+.|+.|-++-..|.+...+++
T Consensus 301 giLFI~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh--i~F~~AYliAa~a~i~Li~~Y~~~vl~~~ 377 (430)
T PF06123_consen 301 GILFIGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH--IGFNLAYLIAALACIGLISLYLSSVLKSW 377 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33333444445555555667788888887444332 22223333332 12466788888888899999999988853
No 139
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=29.34 E-value=3.6e+02 Score=22.95 Aligned_cols=76 Identities=8% Similarity=-0.018 Sum_probs=39.5
Q ss_pred CCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHHHHH--HHHH-HHcccccchhHHHHHHHHhhhhhh
Q 021029 59 MTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF--ILGV-AAGLEVMSCRMLLIMSVISFGVVV 134 (318)
Q Consensus 59 ~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv~~~--l~~~-~~l~ek~~~~~~~~i~l~~~Gv~~ 134 (318)
.+++.++...+|.-+|.+......-...+.++.+...+-....-+|.. +.+. ++.+.+.+....++-+..+.|...
T Consensus 96 ~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~Glyf 174 (224)
T PF09930_consen 96 SSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGLYF 174 (224)
T ss_pred CcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 344555556777777777665555555555555555554444333332 2222 333334445555666665655543
No 140
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=28.92 E-value=64 Score=24.92 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=26.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021029 140 ININWIGVVYQMGGVVGEALRLIFMEILVKR 170 (318)
Q Consensus 140 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~ 170 (318)
.+.+.+|.++.-+-.+.|++|.++.+.+-++
T Consensus 101 lsn~~LgwIL~gVf~lIWslY~~~~~~l~ed 131 (138)
T PF07123_consen 101 LSNNLLGWILLGVFGLIWSLYFVYTSTLDED 131 (138)
T ss_pred ccCchhHHHHHHHHHHHHHHHHhhccccCCC
Confidence 3566799999999999999999999997644
No 141
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=28.01 E-value=75 Score=28.33 Aligned_cols=69 Identities=9% Similarity=-0.062 Sum_probs=36.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhcchhhhh-hhhhhhhHHHhhhhHhhcCCcccc--hhHHHHHHHHHHHHHHHh
Q 021029 216 MLTLNCLCTFALNLSVFLVISHTSALTIR-VAGVVKDWVVVLFSALLFADTKLT--IINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 216 l~~~~~v~~~~~~~~~~~~~~~~~a~~~s-~~~~l~~v~~~l~~~~~~~e~~~s--~~~~~G~~lii~g~~~~~ 286 (318)
..+.+|++--+.|...-.++...+-..+- +...+.-+.++.+.++ .+++ .+ ...+.|.+++++++++-.
T Consensus 74 ~A~aGGvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~-~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 74 FAMAGGVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPK-INRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HHHHhhHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCC-CCCceEEEccHHHHHHHHHHHH
Confidence 34555555555566555555544332221 1122334445555543 3344 44 356778888888887654
No 142
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=27.66 E-value=89 Score=19.36 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHhhcccchhh
Q 021029 273 FGYGIAIAGVAAYNNHKLKKEA 294 (318)
Q Consensus 273 ~G~~lii~g~~~~~~~~~~~~~ 294 (318)
+-+.+++.|++.+.+.++++++
T Consensus 17 ~~~~~~Figiv~wa~~p~~k~~ 38 (48)
T cd01324 17 LYLALFFLGVVVWAFRPGRKKA 38 (48)
T ss_pred HHHHHHHHHHHHHHhCCCcchh
Confidence 3346788899999887655433
No 143
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=27.34 E-value=5.2e+02 Score=24.16 Aligned_cols=20 Identities=15% Similarity=0.233 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q 021029 272 LFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 272 ~~G~~lii~g~~~~~~~~~~ 291 (318)
+.|..+++.|+..|-..++|
T Consensus 418 ~~~~~~~~~g~~~y~~~~~~ 437 (445)
T PRK11357 418 ICAVIVIATGLPAYAFWAKR 437 (445)
T ss_pred HHHHHHHHHhhhHHhheech
Confidence 35788888898887765544
No 144
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=26.95 E-value=2.4e+02 Score=20.25 Aligned_cols=57 Identities=16% Similarity=0.202 Sum_probs=27.6
Q ss_pred HHhhcchhhhhhhhhhhhHHHhhhhHh---hcCCcccchhHHHHHHHHHHHHHHHhhccc
Q 021029 234 VISHTSALTIRVAGVVKDWVVVLFSAL---LFADTKLTIINLFGYGIAIAGVAAYNNHKL 290 (318)
Q Consensus 234 ~~~~~~a~~~s~~~~l~~v~~~l~~~~---~~~e~~~s~~~~~G~~lii~g~~~~~~~~~ 290 (318)
+++++.-...-..-.+.-+.++++|.+ +-++..+-...|.|.+-=+++.-++....+
T Consensus 24 ~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~ 83 (93)
T PF06946_consen 24 AIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTN 83 (93)
T ss_pred HHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHh
Confidence 455554333333333333444444433 233221333457888777777777665544
No 145
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=26.88 E-value=85 Score=20.97 Aligned_cols=22 Identities=27% Similarity=0.246 Sum_probs=14.3
Q ss_pred hHHHHHHHHHHHHHHHhhcccc
Q 021029 270 INLFGYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 270 ~~~~G~~lii~g~~~~~~~~~~ 291 (318)
...+++-.++.|..+|..-+++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~ 26 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3456667777788877755443
No 146
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=26.47 E-value=53 Score=28.83 Aligned_cols=107 Identities=15% Similarity=-0.028 Sum_probs=65.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhccccCCC---CCHHHHHHHHhHHHHHHHHHHHHhhhhhccchHHHHHHHHHHHHH
Q 021029 27 FPLGLTLLHMVFSSVLCFLLTKVFKVMKVEDG---MTLEIYTTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPV 103 (318)
Q Consensus 27 ~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~vl~~~~pv 103 (318)
.-+.++++.-..+.++.++.....+..+.-.. .+...++-.+.+.|++.....+...+=++.+++-++.+-......
T Consensus 214 ~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~ 293 (347)
T KOG1442|consen 214 CIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAA 293 (347)
T ss_pred eehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHH
Confidence 45678888888888888888776665543222 212222223333344444344445555666777666665555555
Q ss_pred HHHHHHHHHcccccchhHHHHHHHHhhhhh
Q 021029 104 AVFILGVAAGLEVMSCRMLLIMSVISFGVV 133 (318)
Q Consensus 104 ~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~ 133 (318)
.=.+++..+++|.-+..+|-+..+.+.|-.
T Consensus 294 aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~ 323 (347)
T KOG1442|consen 294 AQTVLAVAYYSETKSGLWWTSNIVVLVGSL 323 (347)
T ss_pred HHHHHHHHHHHHHhhhheeeeeEEEEehhH
Confidence 666788889999888888877666555543
No 147
>PRK01637 hypothetical protein; Reviewed
Probab=25.63 E-value=2.2e+02 Score=25.02 Aligned_cols=22 Identities=5% Similarity=-0.124 Sum_probs=13.6
Q ss_pred cchhHHHHHHHHHHHHHHHhhc
Q 021029 267 LTIINLFGYGIAIAGVAAYNNH 288 (318)
Q Consensus 267 ~s~~~~~G~~lii~g~~~~~~~ 288 (318)
+-|..+.+.++.+++-+-....
T Consensus 246 llWlyl~~~ilL~Gaelna~~~ 267 (286)
T PRK01637 246 FVWVYLSWCIVLLGAEITATLG 267 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777766666544443
No 148
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=24.22 E-value=1.1e+02 Score=24.04 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=14.9
Q ss_pred hhcchhhhhhhhhhhhHHHhhhh-----HhhcCCc
Q 021029 236 SHTSALTIRVAGVVKDWVVVLFS-----ALLFADT 265 (318)
Q Consensus 236 ~~~~a~~~s~~~~l~~v~~~l~~-----~~~~~e~ 265 (318)
..-|....+...|+-|.+..+++ .++++|.
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~ 104 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAILAQYLFFSEL 104 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence 33444445555555555554444 4445555
No 149
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=23.87 E-value=8e+02 Score=25.19 Aligned_cols=43 Identities=9% Similarity=0.114 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhHHHHHHHHhhhhhhe
Q 021029 93 FAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA 135 (318)
Q Consensus 93 ~~~vl~~~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~~Gv~~~ 135 (318)
-+.++..+.|+-.+.++.+...+|.+...+.+.+-.++|.+-.
T Consensus 12 Ra~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 12 RAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 3466778899999999998877776555566666666676544
No 150
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=23.19 E-value=6.4e+02 Score=23.79 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=22.3
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q 021029 24 NFPFPLGLTLLHMVFSSVLCFLLTKVFKV 52 (318)
Q Consensus 24 ~~~~p~~l~~~r~~~~~~~~~~~~~~~~~ 52 (318)
-+|+|.++...|.+.-++...++.+.-++
T Consensus 55 l~Ps~~tLli~Qal~la~~~~pl~~lar~ 83 (449)
T PF09852_consen 55 LFPSPLTLLIVQALLLALGAIPLYRLARR 83 (449)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999998887777777665554
No 151
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=22.42 E-value=2.9e+02 Score=23.70 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=33.0
Q ss_pred hHHhHHHHHHHHHHHHHHHH---HhhcchhhhhhhhhhhhHHHhhhhHhhc---CCc---ccchhHHHHHHHHHHHHHHH
Q 021029 215 LMLTLNCLCTFALNLSVFLV---ISHTSALTIRVAGVVKDWVVVLFSALLF---ADT---KLTIINLFGYGIAIAGVAAY 285 (318)
Q Consensus 215 ~l~~~~~v~~~~~~~~~~~~---~~~~~a~~~s~~~~l~~v~~~l~~~~~~---~e~---~~s~~~~~G~~lii~g~~~~ 285 (318)
..+++.-+.+++.|+..|.. +..+.+...+... -.--.++.|++- .+. ..+...|++-++++.|.++.
T Consensus 161 ~~F~~af~vAflFnwIGFlltycl~tT~agRYGA~~---GfGLsLikwilIv~~sd~f~~y~n~q~wLwwi~~vlG~ll~ 237 (262)
T KOG4812|consen 161 GIFMWAFIVAFLFNWIGFLLTYCLTTTHAGRYGAIS---GFGLSLIKWILIVRFSDDFESYFNGQYWLWWIFLVLGLLLF 237 (262)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhhh---ccchhhheeeEEeecccccccccccchHHHHHHHHHHHHHH
Confidence 44566666677766655543 3333333333221 111122223221 111 04445677777777777655
Q ss_pred h
Q 021029 286 N 286 (318)
Q Consensus 286 ~ 286 (318)
.
T Consensus 238 l 238 (262)
T KOG4812|consen 238 L 238 (262)
T ss_pred H
Confidence 3
No 152
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=21.95 E-value=1.2e+02 Score=21.35 Aligned_cols=19 Identities=26% Similarity=0.315 Sum_probs=13.7
Q ss_pred chhHHHHHHHHHHHHHHHh
Q 021029 268 TIINLFGYGIAIAGVAAYN 286 (318)
Q Consensus 268 s~~~~~G~~lii~g~~~~~ 286 (318)
+...++|..+.+.|.+.+-
T Consensus 3 N~~Fl~~l~lliig~~~~v 21 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFV 21 (92)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4556788888888876654
No 153
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=21.69 E-value=6.9e+02 Score=23.58 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHHHhhcc
Q 021029 269 IINLFGYGIAIAGVAAYNNHK 289 (318)
Q Consensus 269 ~~~~~G~~lii~g~~~~~~~~ 289 (318)
.....|.++.+.|+.+|...+
T Consensus 411 ~~~~~~~~~~~~g~~~y~~~~ 431 (468)
T TIGR03810 411 KYLLLSAILYAPGIYFYARAR 431 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356888888999998887644
No 154
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.30 E-value=81 Score=27.59 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=17.9
Q ss_pred cchhHHHHHHHHHHHHHHHhh
Q 021029 267 LTIINLFGYGIAIAGVAAYNN 287 (318)
Q Consensus 267 ~s~~~~~G~~lii~g~~~~~~ 287 (318)
+|..|+++..+++.|+.+..+
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~ 255 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIY 255 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999876643
No 155
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=20.75 E-value=5.5e+02 Score=22.14 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=24.4
Q ss_pred HHhhcchhhhhhhhhhhhHHHhhhhHhhcCCc
Q 021029 234 VISHTSALTIRVAGVVKDWVVVLFSALLFADT 265 (318)
Q Consensus 234 ~~~~~~a~~~s~~~~l~~v~~~l~~~~~~~e~ 265 (318)
+.++-++......+.++-...++...+++.-.
T Consensus 115 cy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss 146 (249)
T PF10225_consen 115 CYRYGPPVDPRSRNFVKWALQLIGLVLIYFSS 146 (249)
T ss_pred hcccCCCccHhHHHHHHHHHHHHHHHHHHHHc
Confidence 45678888888888888888877777777655
No 156
>PRK11715 inner membrane protein; Provisional
Probab=20.25 E-value=7.5e+02 Score=23.46 Aligned_cols=70 Identities=13% Similarity=0.116 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHcccccchhHHHHHHHHh--hhhhheecCcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 021029 100 IMPVAVFILGVAAGLEVMSCRMLLIMSVIS--FGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRK 171 (318)
Q Consensus 100 ~~pv~~~l~~~~~l~ek~~~~~~~~i~l~~--~Gv~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~ 171 (318)
..++.+.++-=++-|.|+...|++=+.+++ .=+.+.+.++. -..+..+.+.|+.|-.+-..|.....++.
T Consensus 312 ~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEH--igF~~AYliAa~a~v~li~~Y~~~vl~~~ 383 (436)
T PRK11715 312 ALTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEH--IGFTLAYLIAALACVLLIGFYLSAVLRSW 383 (436)
T ss_pred HHHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444444444556788888886443332 22233333332 12466788888888899999999988743
No 157
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=20.12 E-value=1.3e+02 Score=22.37 Aligned_cols=54 Identities=11% Similarity=0.076 Sum_probs=33.5
Q ss_pred ccccchhHHHHHHHHhhhhhheecCc---cc------chHHHHHHHHHHHHHHHHHHHHHHHH
Q 021029 114 LEVMSCRMLLIMSVISFGVVVASYGE---IN------INWIGVVYQMGGVVGEALRLIFMEIL 167 (318)
Q Consensus 114 ~ek~~~~~~~~i~l~~~Gv~~~~~~~---~~------~~~~G~~~~l~s~~~~a~~~v~~~~~ 167 (318)
+.|++..+-.|+.+.++|++++-.+- .+ +-.+|.+..+.|...|..-..+.-+.
T Consensus 5 ~~KiN~~R~~al~lif~g~~vmy~gi~f~~~~~im~ifmllG~L~~l~S~~VYfwIGmlStka 67 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIGMIVMYIGIFFKASPIIMVIFMLLGLLAILASTAVYFWIGMLSTKA 67 (114)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 35788889999999999998765431 11 12356666666665555544444443
No 158
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=20.10 E-value=1.8e+02 Score=17.85 Aligned_cols=18 Identities=6% Similarity=0.122 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhhcccc
Q 021029 274 GYGIAIAGVAAYNNHKLK 291 (318)
Q Consensus 274 G~~lii~g~~~~~~~~~~ 291 (318)
-+.+++.|++++.+.+++
T Consensus 17 ~~~~~F~gi~~w~~~~~~ 34 (49)
T PF05545_consen 17 LFFVFFIGIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHHHHHHHHcccc
Confidence 345566677777776554
No 159
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=20.07 E-value=2.3e+02 Score=21.77 Aligned_cols=29 Identities=14% Similarity=0.332 Sum_probs=14.6
Q ss_pred hhhhHhhcCCcccchhHHHHHHHHHHHHHHH
Q 021029 255 VLFSALLFADTKLTIINLFGYGIAIAGVAAY 285 (318)
Q Consensus 255 ~l~~~~~~~e~~~s~~~~~G~~lii~g~~~~ 285 (318)
+++|.+.+++. -...++|..+...|+...
T Consensus 75 if~G~l~~~~~--~~~~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 75 IFLGTLCLGQS--ILSIIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHhhH--HHHHHHHHHHHHHHHHHH
Confidence 33444444443 234456666666665433
Done!