Query 021031
Match_columns 318
No_of_seqs 154 out of 846
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:44:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2plc_A PI-PLC, phosphatidylino 100.0 2.3E-48 8E-53 361.0 15.1 261 42-311 2-273 (274)
2 3ea1_A 1-phosphatidylinositol 100.0 1.8E-44 6.1E-49 336.3 21.4 262 41-313 8-295 (298)
3 3v1h_A 1-phosphatidylinositol 100.0 2.5E-44 8.6E-49 337.1 19.6 261 41-312 4-301 (306)
4 3h4x_A Phosphatidylinositol-sp 99.6 5E-15 1.7E-19 137.6 9.3 127 53-192 24-194 (339)
5 3qr0_A Phospholipase C-beta (P 97.4 0.00042 1.4E-08 72.5 10.1 131 54-190 326-469 (816)
6 1djx_A PLC-D1, phosphoinositid 97.4 0.00034 1.2E-08 71.3 9.0 131 54-190 167-306 (624)
7 2zkm_X 1-phosphatidylinositol- 97.4 0.00057 2E-08 71.5 10.2 131 54-190 315-461 (799)
8 3ohm_B 1-phosphatidylinositol- 97.0 0.0026 9E-08 67.0 10.6 131 54-190 319-465 (885)
9 1rbl_M Ribulose 1,5 bisphospha 41.9 28 0.00094 27.0 4.1 28 115-142 61-88 (109)
10 1svd_M Ribulose bisphosphate c 41.1 28 0.00096 27.0 4.0 28 115-142 63-90 (110)
11 3zxw_B Ribulose bisphosphate c 39.6 31 0.0011 27.1 4.1 29 114-142 59-87 (118)
12 1bwv_S Rubisco, protein (ribul 36.3 37 0.0013 27.4 4.1 28 115-142 55-82 (138)
13 1bxn_I Rubisco, protein (ribul 35.9 37 0.0013 27.5 4.1 28 115-142 55-82 (139)
14 1wdd_S Ribulose bisphosphate c 35.5 38 0.0013 27.0 4.1 27 116-142 74-100 (128)
15 1gk8_I Ribulose bisphosphate c 33.3 43 0.0015 27.1 4.1 27 116-142 81-107 (140)
16 4f0h_B Ribulose bisphosphate c 32.8 45 0.0015 26.9 4.1 27 115-141 55-81 (138)
17 3m91_B Prokaryotic ubiquitin-l 31.9 31 0.0011 22.1 2.4 22 120-141 15-36 (44)
18 2k7r_A Primosomal protein DNAI 24.5 25 0.00084 26.8 1.1 19 121-139 25-45 (106)
19 3rlg_A Sphingomyelin phosphodi 23.4 1.2E+02 0.0043 27.5 5.8 59 88-146 40-117 (302)
20 2pgf_A Adenosine deaminase; me 22.2 1.3E+02 0.0045 27.7 5.9 73 88-160 119-195 (371)
21 2o55_A Putative glycerophospho 21.0 2.8E+02 0.0094 23.7 7.5 61 88-148 27-119 (258)
No 1
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A*
Probab=100.00 E-value=2.3e-48 Score=361.05 Aligned_cols=261 Identities=22% Similarity=0.342 Sum_probs=194.6
Q ss_pred CcccccCCCCCCCccccceeccccccccccccCC-CCCCCCcccCCccCHHHHHHccCeEeeeeecCcceEEeccc-CCc
Q 021031 42 DRKKWMAGLNPEKVHLNKILWPGTHDSATNKIGI-PCITRPFAQCQSLSIYKQLVLGARVIDIRIQEDRRVCHGIL-LTY 119 (318)
Q Consensus 42 ~~~~WM~~l~~~~~~L~~l~iPGTHdS~~~~~~~-p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~~~~~~Hg~~-~~~ 119 (318)
+.++||++|+ +++||++|+|||||||++|..+. +.+..+|++||+.+|++||++||||||||++.++++|||.+ .+.
T Consensus 2 ~~~~WM~~l~-~~~~l~~l~ipGtHdS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~~~~~~~H~~~~~~~ 80 (274)
T 2plc_A 2 TTKQWMSALP-DTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLNIYHGPIFLNA 80 (274)
T ss_dssp CGGGTGGGSC-TTCBGGGSEEEEETTTTTTSCSHHHHHTHHHHCCCSSCHHHHHHTTCCEEEEEECTTSEEEETTEEEEE
T ss_pred ChhhHhhcCC-CCCeeeeeeeeeecchhhccCCCccccccccccCCCcCHHHHHHhCCcEEEEEECCcEEEEEcCCCCCC
Confidence 5689999999 78999999999999999998642 12335799999999999999999999999999999999998 457
Q ss_pred cHHHHHHHHHHHHhcCCCcEEEEEeeeCCCCCChhHH-HHHHHHHhCCccccCCC---CCCCCcHHHHhCCcEEEEEcCC
Q 021031 120 SVDVVINDVKKFLAETDSEIIILEIRTEFGHEDPPEF-DKYLEEQLGEFLIHQDD---NAFNKTIAELLPKRVICVWKPR 195 (318)
Q Consensus 120 ~~~~vL~~i~~FL~~hp~EvVil~~~~~~~~~~~~~~-~~~l~~~~g~~l~~~~~---~~~~~tL~~l~gk~vIv~~~~~ 195 (318)
+++++|.+|++||++||+|||||++++++..++...+ .+.+.+.+++++++++. ...+|||+|++||+||+.+.+.
T Consensus 81 ~~~~~L~~i~~fL~~~P~EvVil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~pTL~e~rGK~vlv~~~~~ 160 (274)
T 2plc_A 81 SLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHT 160 (274)
T ss_dssp EHHHHHHHHHHHHHHSTTCCEEEEEEETTCSCSHHHHHHHHHHHHTGGGBCEEESSCCCCCCCBTTTTTTCEEEEEESTT
T ss_pred CHHHHHHHHHHHHHhCCCceEEEEEEeCCCCCCcHHHHHHHHHHHhhceeecCcccccCCCCCCHHHhCCCEEEEEeCCC
Confidence 9999999999999999999999999999876544333 35566889999988642 2358999999999999887643
Q ss_pred CCCCCCCC---CCCCCCC--CcccCCCCCCCchhhHHHHHHHHhcCCCCCCCCeEEEEEeeeccCCCcccccccccchhh
Q 021031 196 KSPQPKAG---GPLWSAG--YLKDNWVDTDLPSTKFDSNIKHLSQQPPVTSRKFFYRVENTVTPKADNPVVCVKPVTGRI 270 (318)
Q Consensus 196 ~~~~~~~~---~~~W~~~--~i~~~W~n~~~~~~kl~~~l~~l~~~~~~~~~~~l~v~q~~lTp~~~~~~~sl~~~a~~~ 270 (318)
..+..+.+ +.-|... .++|.|... +..+|+..+.+.+.+.. . .++.+|+++.+.+. .....+.+|..+
T Consensus 161 ~~~~~~~~~~~~~~w~~~~~~iqD~y~~~-~~~~K~~~i~~~l~~a~-~-~~~~~~iN~~S~~~----~~~~p~~~A~~~ 233 (274)
T 2plc_A 161 KKPLVINSRKFGMQFGAPNQVIQDDYNGP-SVKTKFKEIVQTAYQAS-K-ADNKLFLNHISATS----LTFTPRQYAAAL 233 (274)
T ss_dssp CSCEEETTEEESEETTCTTEEEECCCBSC-CHHHHHHHHHHHHHHHH-H-CSSSEEEEECCCBC----SSSCHHHHHHHH
T ss_pred CCCCCcCcccccccCCCCCccccccCCCC-cHHHHHHHHHHHHHHhh-c-CCCCeEEEEEcccC----CCCCHHHHHHHH
Confidence 21111111 0113221 266666432 22457776666555422 1 35678876654321 101245688999
Q ss_pred hHHHHHHHhhhhcCCCCCcccEEEecCCCchHHHHHHHHhh
Q 021031 271 HGYARLFINQCYSKGFADRLQIFSTDFIDGDFVDACVGLTH 311 (318)
Q Consensus 271 ~~~l~~wl~~~~~~~~~~~~NII~~DF~~~~lv~~vI~lN~ 311 (318)
|+.+..|+++....+ ..++|||++||++.++|+.+|++|.
T Consensus 234 n~~l~~~l~~~~~~~-~~~~gIV~~DFv~~~~i~~vI~~N~ 273 (274)
T 2plc_A 234 NNKVEQFVLNLTSEK-VRGLGILIMDFPEKQTIKNIIKNNK 273 (274)
T ss_dssp HHHHHHHHHHHHHTT-CCCCEEEEESSCCHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhcCC-CCcccEEEEeCCCchhHHHHHhccC
Confidence 999999998643323 3579999999999779999999995
No 2
>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A
Probab=100.00 E-value=1.8e-44 Score=336.33 Aligned_cols=262 Identities=19% Similarity=0.263 Sum_probs=194.0
Q ss_pred CCcccccCCCCCCCccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC----cceEEeccc
Q 021031 41 QDRKKWMAGLNPEKVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE----DRRVCHGIL 116 (318)
Q Consensus 41 ~~~~~WM~~l~~~~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~----~~~~~Hg~~ 116 (318)
.+.++||+.|+ +++||++|+||||||||+|..+.|. ...|+.||+++|++||++||||||||++. ++++|||.+
T Consensus 8 ~~~~~WM~~l~-d~~pl~~lsiPGTHdS~a~~~~~~~-~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~~~l~~~Hg~~ 85 (298)
T 3ea1_A 8 ENWSKWMQPIP-DNIPLARISIPGTHDSGTFKLQNPI-KQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPL 85 (298)
T ss_dssp GCTTSTTTTSC-TTSBTTTSCEEEETTTTCTTCCSHH-HHHHHCCCSSCHHHHHHTTCCEEEEEEEECTTSCEEEEETTE
T ss_pred hcHHHHHHhCc-cCCeeeeeeeccccccccccCCCch-hhhcccCccccHHHHHhcCCeEEEEEeEecCCCcEEEECCcc
Confidence 35679999998 7999999999999999999976543 35789999999999999999999999973 599999976
Q ss_pred C-CccHHHHHHHHHHHHhcCCCcEEEEEeeeCCCC--CChhHHHHHHHH-HhCCccccCCCCCCCCcHHHHhCCcEEEEE
Q 021031 117 L-TYSVDVVINDVKKFLAETDSEIIILEIRTEFGH--EDPPEFDKYLEE-QLGEFLIHQDDNAFNKTIAELLPKRVICVW 192 (318)
Q Consensus 117 ~-~~~~~~vL~~i~~FL~~hp~EvVil~~~~~~~~--~~~~~~~~~l~~-~~g~~l~~~~~~~~~~tL~~l~gk~vIv~~ 192 (318)
. ..+++++|.+|++||++||+|||||++++++.. +.+..|.+.+.+ .+.+..+..... +|||+|+|||+|++--
T Consensus 86 ~~~~~l~dvL~ei~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~--~ptLge~RGKivll~r 163 (298)
T 3ea1_A 86 YLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPIFLKTEG--NIKLGDARGKIVLLKR 163 (298)
T ss_dssp EEEEEHHHHHHHHHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBCCCCS--SCBHHHHTTSEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHHHHhcCcccccCCC--CCcHHHhcCCEEEEEe
Confidence 4 468999999999999999999999999998863 334578776655 466555444333 6899999999888642
Q ss_pred cCCCCCCCCCCCCCCCCC-------------CcccCCCCCCCchhhHHHHHHHHhcCC-CCCCCCeEEEEEeeeccCCCc
Q 021031 193 KPRKSPQPKAGGPLWSAG-------------YLKDNWVDTDLPSTKFDSNIKHLSQQP-PVTSRKFFYRVENTVTPKADN 258 (318)
Q Consensus 193 ~~~~~~~~~~~~~~W~~~-------------~i~~~W~n~~~~~~kl~~~l~~l~~~~-~~~~~~~l~v~q~~lTp~~~~ 258 (318)
-............-|+.. .+||.|.-. ..+|+..+..++.+.. ...+++.+|++..+.|.-..
T Consensus 164 f~~~~~~~g~~~~~W~dn~~f~~~~~~~~~~~vQD~y~v~--~~~K~~~I~~~l~~a~~~~~~~~~~yinf~S~s~g~~- 240 (298)
T 3ea1_A 164 YSGSNESGGYNNFYWPDNETFTTTVNQNVNVTVQDKYKVN--YDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGT- 240 (298)
T ss_dssp SSCCCSCCSBCCCCCCTTSEEEEECSSSCEEEEECCTTSC--HHHHHHHHHHHHHHHHTTTTCTTEEEEEECCCCCCSS-
T ss_pred cCCcccCCCcCcccCCCccccccccCCCccEEeCceeecC--cHHHHHHHHHHHHHhhcccccCCcEEEEEEcccCCCc-
Confidence 111110001112346442 477788643 4568887766665422 12335689999876552111
Q ss_pred ccccccccchhhhHHHHHHHhhhhcCCCCCcccEEEecCCCc----hHHHHHHHHhhhc
Q 021031 259 PVVCVKPVTGRIHGYARLFINQCYSKGFADRLQIFSTDFIDG----DFVDACVGLTHAR 313 (318)
Q Consensus 259 ~~~sl~~~a~~~~~~l~~wl~~~~~~~~~~~~NII~~DF~~~----~lv~~vI~lN~~~ 313 (318)
.....+.+|.++||.+.+++... .+ .+.+||.+||++. ++++.+|+.|...
T Consensus 241 ~~~~P~~~A~~iNp~~~~~l~~~---~~-~~~Giv~~DF~~~~~~~~l~~~li~~n~~~ 295 (298)
T 3ea1_A 241 AWNSPYSYASSINPEIANDIKQK---NP-TRVGWVIQDYINEKWSPLLYQEVIRANKSL 295 (298)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHH---CC-SCCCEEEESCCSSSSSSCHHHHHHHTTGGG
T ss_pred ccCCHHHHHHhhCHHHHHHHHhc---CC-CceeEEEEecCCCccchHHHHHHHHhhHHh
Confidence 11123568999999999999865 22 5899999999985 3999999999543
No 3
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=100.00 E-value=2.5e-44 Score=337.15 Aligned_cols=261 Identities=19% Similarity=0.276 Sum_probs=193.4
Q ss_pred CCcccccCCCCCCCccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC----cceEEeccc
Q 021031 41 QDRKKWMAGLNPEKVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE----DRRVCHGIL 116 (318)
Q Consensus 41 ~~~~~WM~~l~~~~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~----~~~~~Hg~~ 116 (318)
..+++||+.|+ +++||++|+|||||||++|.++.|. ...|++||+++|++||++||||||||++. .+++|||.+
T Consensus 4 ~~~~~WM~~l~-d~~~l~~lsiPGTHdS~~~~~~~p~-~~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~~~l~~~Hg~~ 81 (306)
T 3v1h_A 4 KSPENWMSKLD-DGKHLTEINIPGSHDSGSFTLKDPV-KSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMV 81 (306)
T ss_dssp GSGGGSGGGSC-TTSBGGGSCEEEETTGGGGGCCCHH-HHHHHCCCSSCHHHHHHTTCCEEEEEEEEEETTEEEEEETTE
T ss_pred CChhhHHhcCC-CCCEeecceeccccchhhccCCCcc-cchhhccCCCCHHHHHHhCcceEEEEeeecCCCcEEEEccCc
Confidence 45789999998 7899999999999999999976543 35789999999999999999999999974 599999976
Q ss_pred C-CccHHHHHHHHHHHHhcCCCcEEEEEeeeCCCCCC--hhHHHHHHHHHh------CCccccCCCCCCCCcHHHHhCCc
Q 021031 117 L-TYSVDVVINDVKKFLAETDSEIIILEIRTEFGHED--PPEFDKYLEEQL------GEFLIHQDDNAFNKTIAELLPKR 187 (318)
Q Consensus 117 ~-~~~~~~vL~~i~~FL~~hp~EvVil~~~~~~~~~~--~~~~~~~l~~~~------g~~l~~~~~~~~~~tL~~l~gk~ 187 (318)
. +.+++++|++|++||++||+|||||+|+++++... ...|.+.+.+.. .++++..+. ..|||+|+|||+
T Consensus 82 ~~~~~l~dvL~~i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~~~--~~PtLge~RGKI 159 (306)
T 3v1h_A 82 YLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSN--ANPTLKETKGKI 159 (306)
T ss_dssp EEEEEHHHHHHHHHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCCSC--SSCBHHHHTTSE
T ss_pred ccCCcHHHHHHHHHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecCCC--CCCchHHhcCcE
Confidence 4 57999999999999999999999999999997532 357888776532 223333322 379999999998
Q ss_pred EEEEEcCCCCCCCCCCC----CCCCCC--------------CcccCCCCCCCchhhHHHHHHHHhcCCCCCCCCeEEEEE
Q 021031 188 VICVWKPRKSPQPKAGG----PLWSAG--------------YLKDNWVDTDLPSTKFDSNIKHLSQQPPVTSRKFFYRVE 249 (318)
Q Consensus 188 vIv~~~~~~~~~~~~~~----~~W~~~--------------~i~~~W~n~~~~~~kl~~~l~~l~~~~~~~~~~~l~v~q 249 (318)
|++---.........+. .-|+.. .|||.|... ...|+..+.+++.+.....+.+.+|++.
T Consensus 160 vll~rf~~~~~~~g~~~~~~g~~W~dn~~f~~~~~~~~~~~~iQD~y~~~--~~~K~~~i~~~l~~a~~~~~~~~l~iNf 237 (306)
T 3v1h_A 160 VLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDY--YDKKVEAVKNLLAKAKTDSNKDNVYVNF 237 (306)
T ss_dssp EEEEESSSCSCCSSBTCSTTCCCCCTTEEEEEEETTTTEEEEEEECTTCC--HHHHHHHHHHHHHHHHTCCCTTEEEEEE
T ss_pred EEEEecCCccccCCccccccCCCCCCCcccceeccCCCceEEeCcccccC--hHHHHHHHHHHHHHHHhCcCCCeEEEEE
Confidence 88752211100000111 346421 478888743 3568887777775532222357899998
Q ss_pred eeeccCCCcccccccccchhhhHHHHHHHhhhhcCCCCCcccEEEecCCCc------hHHHHHHHHhhh
Q 021031 250 NTVTPKADNPVVCVKPVTGRIHGYARLFINQCYSKGFADRLQIFSTDFIDG------DFVDACVGLTHA 312 (318)
Q Consensus 250 ~~lTp~~~~~~~sl~~~a~~~~~~l~~wl~~~~~~~~~~~~NII~~DF~~~------~lv~~vI~lN~~ 312 (318)
.+.+.... .....+.+|..+||.+.+||.... . .+.+||++||++. ++|+.+|+.|..
T Consensus 238 ~Sas~g~~-~~~~P~~~A~~iNp~~~~~L~~~~---~-~~~GIv~~Df~~~~w~~~~~Lv~~iI~~N~~ 301 (306)
T 3v1h_A 238 LSVASGGS-AFNSTYNYASYINPEIAKTIKANG---K-ARTGWLIVDYAGYTWPGYDDIVSEIIDSNKL 301 (306)
T ss_dssp CCCCCCSS-SCCCHHHHHHHHHHHHHHHHHHTC---S-CCCCEEEESSTTCCCTTSCCHHHHHHHHSCC
T ss_pred EcccCCCc-cccCHHHHHHHHCHHHHHHHHhcC---C-CceEEEEEeCCCCCccchHHHHHHHHHhCcc
Confidence 76542111 122334588999999999997642 2 5799999999986 599999999954
No 4
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=99.57 E-value=5e-15 Score=137.60 Aligned_cols=127 Identities=17% Similarity=0.256 Sum_probs=97.4
Q ss_pred CCccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC-----cceEEecc-------cC---
Q 021031 53 EKVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE-----DRRVCHGI-------LL--- 117 (318)
Q Consensus 53 ~~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~-----~~~~~Hg~-------~~--- 117 (318)
.++||++++++|+|||..-. . ..+|.+||+.|||.|.|.+.. ++.++||. |.
T Consensus 24 ~~~pls~~T~~g~HNSY~~g--------~-----~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~as 90 (339)
T 3h4x_A 24 AATTYGTSTSVGVHNAYEKE--------K-----YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGAA 90 (339)
T ss_dssp -CCBTTSEEEEEETTTTCTT--------T-----CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCCS
T ss_pred ccCccccceEeecccccccc--------C-----cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCcccccccccccc
Confidence 47999999999999997643 1 579999999999998777753 58899965 11
Q ss_pred ----------CccHHHHHHHHHHHHhcCCCc---EEEEEeeeCCCC---CChhHHHHHHHHHhCCccccCCC------CC
Q 021031 118 ----------TYSVDVVINDVKKFLAETDSE---IIILEIRTEFGH---EDPPEFDKYLEEQLGEFLIHQDD------NA 175 (318)
Q Consensus 118 ----------~~~~~~vL~~i~~FL~~hp~E---vVil~~~~~~~~---~~~~~~~~~l~~~~g~~l~~~~~------~~ 175 (318)
..+|.+.|++|++|++.||+| +|+|..|..+.. ..+..+.++|.+.||+.++.|+. .+
T Consensus 91 ~~~dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~~vFGd~L~tPddvrG~~~TL 170 (339)
T 3h4x_A 91 NASELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATA 170 (339)
T ss_dssp SGGGTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHHHHHGGGBCCHHHHHTTSSSH
T ss_pred cccccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHHHHhccceEcchhhcccccCH
Confidence 268999999999999999999 555555543321 12367999999999987776542 11
Q ss_pred -------CCCcHHHHhCCcEEEEE
Q 021031 176 -------FNKTIAELLPKRVICVW 192 (318)
Q Consensus 176 -------~~~tL~~l~gk~vIv~~ 192 (318)
.||||++++||.+|++-
T Consensus 171 ~eAVla~GWPSl~slRGKVlf~Ld 194 (339)
T 3h4x_A 171 DEAVRAGGWPSRADLAGKFLFELI 194 (339)
T ss_dssp HHHHHHHCCCBTGGGTTCEEEEEE
T ss_pred HHHHhcCCCCChHHhCCCEEEEEe
Confidence 38999999999877553
No 5
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.44 E-value=0.00042 Score=72.54 Aligned_cols=131 Identities=16% Similarity=0.195 Sum_probs=94.0
Q ss_pred CccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC----cceEEeccc--CCccHHHHHHH
Q 021031 54 KVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE----DRRVCHGIL--LTYSVDVVIND 127 (318)
Q Consensus 54 ~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~----~~~~~Hg~~--~~~~~~~vL~~ 127 (318)
+.||++..|-.|||+- -.+. .-.+.+=......=|..|+|.+.|.+.. +..++||.- +..+|.+|+..
T Consensus 326 ~~Pl~~YfI~sshnty--L~g~----ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tlts~i~f~~v~~~ 399 (816)
T 3qr0_A 326 KLTLAAYYINSSHNTY--LTGH----QLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMCTEVLFKDVVYA 399 (816)
T ss_dssp CSCGGGEEECBBSSTT--BSSC----TTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSSCCCEEHHHHHHH
T ss_pred CCchhhheecccccch--hccc----cccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCcccccccHHHHHHH
Confidence 6799999999999954 4331 1112333345666799999999999964 578999963 46799999999
Q ss_pred HHHHHhcCCCcEEEEEeeeCCCCCChhHHHHHHHHHhCCccccCCC-------CCCCCcHHHHhCCcEEE
Q 021031 128 VKKFLAETDSEIIILEIRTEFGHEDPPEFDKYLEEQLGEFLIHQDD-------NAFNKTIAELLPKRVIC 190 (318)
Q Consensus 128 i~~FL~~hp~EvVil~~~~~~~~~~~~~~~~~l~~~~g~~l~~~~~-------~~~~~tL~~l~gk~vIv 190 (318)
|+++.=....=-|||.+...-+.+......+++.+.||+.|+.... ....|+.++|+||++|-
T Consensus 400 I~~~AF~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lpsP~~Lk~kIlik 469 (816)
T 3qr0_A 400 IAESAFKVSDYPVILSFENHCSVAQQKLLAQYCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRKKILIK 469 (816)
T ss_dssp HHHHTTSSCCSCEEEEEEECCCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSTTCCCCCTTTTTTCEEEE
T ss_pred HHHhcccCCCCCEEEEEecCCCHHHHHHHHHHHHHHhhhhhccCCccccccccCCcCCCHHHHcCCEEEE
Confidence 9998654322348888886554443456788899999999875321 12368899999997664
No 6
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.42 E-value=0.00034 Score=71.26 Aligned_cols=131 Identities=15% Similarity=0.194 Sum_probs=94.6
Q ss_pred CccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC----cceEEeccc--CCccHHHHHHH
Q 021031 54 KVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE----DRRVCHGIL--LTYSVDVVIND 127 (318)
Q Consensus 54 ~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~----~~~~~Hg~~--~~~~~~~vL~~ 127 (318)
+.||++..|--|||+---+-.+ .+.+=..-...=|..|+|.+.|.+.. +..++||.- +..+|.+|+..
T Consensus 167 ~~pLs~Yfi~SsHNTYL~G~Ql------~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlts~i~f~~v~~~ 240 (624)
T 1djx_A 167 DQPLSHYLVSSSHNTYLLEDQL------TGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFTSKILFCDVLRA 240 (624)
T ss_dssp TSCGGGEEECEESSTTBSSCSS------SCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSCCCCEEHHHHHHH
T ss_pred cCcchhheeecccchhhhcCcc------cCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCcccccccHHHHHHH
Confidence 5799999999999986543211 12333455667789999999999964 578999963 46799999999
Q ss_pred HHHHHhcCCCcEEEEEeeeCCCCCChhHHHHHHHHHhCCccccCCC---CCCCCcHHHHhCCcEEE
Q 021031 128 VKKFLAETDSEIIILEIRTEFGHEDPPEFDKYLEEQLGEFLIHQDD---NAFNKTIAELLPKRVIC 190 (318)
Q Consensus 128 i~~FL~~hp~EvVil~~~~~~~~~~~~~~~~~l~~~~g~~l~~~~~---~~~~~tL~~l~gk~vIv 190 (318)
|+++.=..-.=-|||.+...-+.+.-....+++.+.||+.|+.+.. ....|+.++|++|++|-
T Consensus 241 I~~~AF~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd~L~~~~~~~~~~~lpsp~~Lk~kilik 306 (624)
T 1djx_A 241 IRDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLK 306 (624)
T ss_dssp HHHHTTTSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGGGBCCSCCTTCCSSCCCTTTTTTCEEEE
T ss_pred HHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCccCCcCCCCCHHHHCCCEEEE
Confidence 9997543322238888876444333456788899999998876531 12368999999997663
No 7
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.37 E-value=0.00057 Score=71.50 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=94.9
Q ss_pred CccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC------cceEEeccc--CCccHHHHH
Q 021031 54 KVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE------DRRVCHGIL--LTYSVDVVI 125 (318)
Q Consensus 54 ~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~------~~~~~Hg~~--~~~~~~~vL 125 (318)
+.||++..|--|||+---+-. -.+.+=..-+..=|..|+|.+.|.+.. +..++||.- +..+|.+||
T Consensus 315 ~~PLshYfI~SSHNTYL~g~Q------l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tlts~i~f~~v~ 388 (799)
T 2zkm_X 315 TQPLNHYFINSSHNTYLTAGQ------FSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTDIFFKEAI 388 (799)
T ss_dssp CSCGGGEEECBBSSTTBSSCS------SSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSCCCEEHHHHH
T ss_pred CCchhhheEeccccceeecCc------ccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCcccccccHHHHH
Confidence 689999999999997654321 123444556777899999999999953 478999963 467999999
Q ss_pred HHHHHHHhcCCCcEEEEEeeeCC-CCCChhHHHHHHHHHhCCccccCCCC-------CCCCcHHHHhCCcEEE
Q 021031 126 NDVKKFLAETDSEIIILEIRTEF-GHEDPPEFDKYLEEQLGEFLIHQDDN-------AFNKTIAELLPKRVIC 190 (318)
Q Consensus 126 ~~i~~FL~~hp~EvVil~~~~~~-~~~~~~~~~~~l~~~~g~~l~~~~~~-------~~~~tL~~l~gk~vIv 190 (318)
..|+++.=..-.=-|||.+...- +.+......+++.+.||+.|+..... ...|+.++|++|++|-
T Consensus 389 ~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd~L~~~~~~~~~~~~~~~lPSP~~Lk~kIlik 461 (799)
T 2zkm_X 389 EAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIK 461 (799)
T ss_dssp HHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEE
T ss_pred HHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhhheecCCccccccccCCCCCCHHHHCCCEEEE
Confidence 99999754331223888887654 44334567888999999988754311 2358999999996663
No 8
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=97.00 E-value=0.0026 Score=67.05 Aligned_cols=131 Identities=11% Similarity=0.189 Sum_probs=93.1
Q ss_pred CccccceeccccccccccccCCCCCCCCcccCCccCHHHHHHccCeEeeeeecC------cceEEeccc--CCccHHHHH
Q 021031 54 KVHLNKILWPGTHDSATNKIGIPCITRPFAQCQSLSIYKQLVLGARVIDIRIQE------DRRVCHGIL--LTYSVDVVI 125 (318)
Q Consensus 54 ~~~L~~l~iPGTHdS~~~~~~~p~~~~~~s~tQ~~si~~QL~~GIRyfDlRv~~------~~~~~Hg~~--~~~~~~~vL 125 (318)
+.||++..|--|||+ |-.+. .-.+.+=......=|..|+|.+.|.+.. +..++||.- +..+|.+|+
T Consensus 319 ~~Pls~YfI~ssHNt--YL~g~----Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~t~~i~f~~v~ 392 (885)
T 3ohm_B 319 TQPLSAYFINSSHNT--YLTAG----QLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMTTEVPLRDVL 392 (885)
T ss_dssp CSCGGGEEECCBSST--TBSSC----SSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSEECCEEHHHHH
T ss_pred Ccchhhheeeccccc--eeccc----cccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCcccCcccHHHHH
Confidence 679999999999995 44331 1123333445667799999999999963 578999963 357999999
Q ss_pred HHHHHHHhcCCCcEEEEEeeeCC-CCCChhHHHHHHHHHhCCccccCCC-------CCCCCcHHHHhCCcEEE
Q 021031 126 NDVKKFLAETDSEIIILEIRTEF-GHEDPPEFDKYLEEQLGEFLIHQDD-------NAFNKTIAELLPKRVIC 190 (318)
Q Consensus 126 ~~i~~FL~~hp~EvVil~~~~~~-~~~~~~~~~~~l~~~~g~~l~~~~~-------~~~~~tL~~l~gk~vIv 190 (318)
..|+++.=..-.=-|||.+...- ..+....+.+++.+.||+.|+.... ....|+..+|++|++|-
T Consensus 393 ~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~~~~g~~L~~~~~~~~~~~~~~~lpsp~~Lk~kilik 465 (885)
T 3ohm_B 393 EAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIEPLDKYPLAPGVPLPSPQDLMGRILVK 465 (885)
T ss_dssp HHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHHHHHGGGBCCSCBTTBCSSSSCCCCCTTTTTTCEEEE
T ss_pred HHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHHHHhhHhhccCcccccccccCCcCCCHHHHcCcEEEE
Confidence 99999764332234777776544 4444567888999999998875321 11358889999996664
No 9
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=41.86 E-value=28 Score=27.03 Aligned_cols=28 Identities=14% Similarity=0.217 Sum_probs=23.2
Q ss_pred ccCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 115 ILLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 115 ~~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
++......+||.+|.+.+++||+|.|=|
T Consensus 61 mf~~~d~~~Vl~Ele~C~k~~p~~yVRl 88 (109)
T 1rbl_M 61 LFACAAPQQVLDEVRECRSEYGDCYIRV 88 (109)
T ss_dssp CTTCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 3445678999999999999999997644
No 10
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=41.14 E-value=28 Score=27.03 Aligned_cols=28 Identities=14% Similarity=0.199 Sum_probs=23.2
Q ss_pred ccCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 115 ILLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 115 ~~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
++......+||.+|.+.+++||+|.|=|
T Consensus 63 mf~~~d~~~Vl~El~~C~k~~p~~yVRl 90 (110)
T 1svd_M 63 FFGEQNVDNVLAEIEACRSAYPTHQVKL 90 (110)
T ss_dssp CTTCCCHHHHHHHHHHHHHHSTTSEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 4445678999999999999999997644
No 11
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=39.61 E-value=31 Score=27.14 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=23.9
Q ss_pred cccCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 114 GILLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 114 g~~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
.++......+||.+|.+.+++||+|.|=|
T Consensus 59 Pmf~~~d~~~Vl~Ele~C~k~~p~~yVRl 87 (118)
T 3zxw_B 59 PLFNCTNAQDVLNEVQQCRSEYPNCFIRV 87 (118)
T ss_dssp CCTTCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCcCCCCHHHHHHHHHHHHHHCCCceEEE
Confidence 34455688999999999999999998744
No 12
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=36.31 E-value=37 Score=27.44 Aligned_cols=28 Identities=7% Similarity=0.045 Sum_probs=23.1
Q ss_pred ccCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 115 ILLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 115 ~~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
++......+||.+|.+.+++||+|.|=|
T Consensus 55 mF~~td~~~Vl~Ele~C~k~~p~~YVRl 82 (138)
T 1bwv_S 55 LFDVTDPAAVLFEINACRKARSNFYIKV 82 (138)
T ss_dssp BCSCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 3445679999999999999999997643
No 13
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=35.89 E-value=37 Score=27.47 Aligned_cols=28 Identities=4% Similarity=0.023 Sum_probs=23.2
Q ss_pred ccCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 115 ILLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 115 ~~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
++......+||.+|.+.+++||+|.|=|
T Consensus 55 mF~~td~~~Vl~Ele~C~k~~p~~YVRl 82 (139)
T 1bxn_I 55 MFDLRDAAGILMEINNARNTFPNHYIRV 82 (139)
T ss_dssp BTTCCCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 3445679999999999999999997643
No 14
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=35.52 E-value=38 Score=26.97 Aligned_cols=27 Identities=4% Similarity=0.074 Sum_probs=22.5
Q ss_pred cCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 116 LLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 116 ~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
+......+||.+|.+.+++||++.|=|
T Consensus 74 Fg~td~~~Vl~El~~C~k~~P~~YVRl 100 (128)
T 1wdd_S 74 FGCTDATQVLKELEEAKKAYPDAFVRI 100 (128)
T ss_dssp TTCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 344678999999999999999997643
No 15
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=33.33 E-value=43 Score=27.09 Aligned_cols=27 Identities=7% Similarity=-0.012 Sum_probs=22.4
Q ss_pred cCCccHHHHHHHHHHHHhcCCCcEEEE
Q 021031 116 LLTYSVDVVINDVKKFLAETDSEIIIL 142 (318)
Q Consensus 116 ~~~~~~~~vL~~i~~FL~~hp~EvVil 142 (318)
+......+||.+|.+.+++||++.|=|
T Consensus 81 Fg~td~~qVl~El~~C~k~~P~~YVRl 107 (140)
T 1gk8_I 81 FGCRDPMQVLREIVACTKAFPDAYVRL 107 (140)
T ss_dssp TTCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 334578999999999999999997643
No 16
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=32.84 E-value=45 Score=26.92 Aligned_cols=27 Identities=7% Similarity=0.020 Sum_probs=22.9
Q ss_pred ccCCccHHHHHHHHHHHHhcCCCcEEE
Q 021031 115 ILLTYSVDVVINDVKKFLAETDSEIII 141 (318)
Q Consensus 115 ~~~~~~~~~vL~~i~~FL~~hp~EvVi 141 (318)
++......+||.+|.+.+++||+|.|=
T Consensus 55 mFg~~d~~~Vl~Ele~C~k~~p~~YVR 81 (138)
T 4f0h_B 55 LFEVTDPAPVLFEINACRKAKSNFYIK 81 (138)
T ss_dssp BCSCCSHHHHHHHHHHHHHHTTTSEEE
T ss_pred CcCCCCHHHHHHHHHHHHHHCCCCeEE
Confidence 344567999999999999999999773
No 17
>3m91_B Prokaryotic ubiquitin-like protein PUP; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis}
Probab=31.92 E-value=31 Score=22.14 Aligned_cols=22 Identities=14% Similarity=0.427 Sum_probs=15.8
Q ss_pred cHHHHHHHHHHHHhcCCCcEEE
Q 021031 120 SVDVVINDVKKFLAETDSEIII 141 (318)
Q Consensus 120 ~~~~vL~~i~~FL~~hp~EvVi 141 (318)
.++++|.+|-.-|.+|..|+|-
T Consensus 15 ~~D~lLDeId~vLE~NAeeFV~ 36 (44)
T 3m91_B 15 ETDDLLDEIDDVLEENAEDFVR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHTC-----
T ss_pred hHHHHHHHHHHHHHHhHHHHHH
Confidence 5789999999999999988874
No 18
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=24.47 E-value=25 Score=26.77 Aligned_cols=19 Identities=37% Similarity=0.613 Sum_probs=13.2
Q ss_pred HHHHHH--HHHHHHhcCCCcE
Q 021031 121 VDVVIN--DVKKFLAETDSEI 139 (318)
Q Consensus 121 ~~~vL~--~i~~FL~~hp~Ev 139 (318)
.+++|+ +|.+||.+||+|+
T Consensus 25 ~~~vl~dP~V~~Fl~~h~~~l 45 (106)
T 2k7r_A 25 KEKVMKDQDVQAFLKENEEVI 45 (106)
T ss_dssp HHHHTTCHHHHHHHHHSTTTC
T ss_pred HHHHHcCHHHHHHHHHChhhC
Confidence 344443 4999999998654
No 19
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=23.43 E-value=1.2e+02 Score=27.52 Aligned_cols=59 Identities=15% Similarity=0.257 Sum_probs=42.7
Q ss_pred cCHHHHHHccCeEeeeeecC-----cceEEecc---cC-----CccHHHHHHHHHHHHh----cCCCc--EEEEEeee
Q 021031 88 LSIYKQLVLGARVIDIRIQE-----DRRVCHGI---LL-----TYSVDVVINDVKKFLA----ETDSE--IIILEIRT 146 (318)
Q Consensus 88 ~si~~QL~~GIRyfDlRv~~-----~~~~~Hg~---~~-----~~~~~~vL~~i~~FL~----~hp~E--vVil~~~~ 146 (318)
..|.+=++.|+..+.+.|.. -.+++||. |. ...+.+.|+.|++-.. .++++ +|++|++-
T Consensus 40 ~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ttpg~~k~~~~l~lv~~DlK~ 117 (302)
T 3rlg_A 40 GQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSATTPGNSKYQEKLVLVVFDLKT 117 (302)
T ss_dssp HHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHHHSTTSTTCCTTCCEEEEEECG
T ss_pred HHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCCCccHHHHHHHHHHhcCCCCCccccceEEEEEEcCC
Confidence 45677788899999888875 27899993 21 4588999999988776 23344 56666665
No 20
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=22.25 E-value=1.3e+02 Score=27.69 Aligned_cols=73 Identities=7% Similarity=0.137 Sum_probs=39.0
Q ss_pred cCHHHHHHccCeEeeeeecCcc-eEEecccCCccHHHHHHHHHHHHhcCCCc--E-EEEEeeeCCCCCChhHHHHHH
Q 021031 88 LSIYKQLVLGARVIDIRIQEDR-RVCHGILLTYSVDVVINDVKKFLAETDSE--I-IILEIRTEFGHEDPPEFDKYL 160 (318)
Q Consensus 88 ~si~~QL~~GIRyfDlRv~~~~-~~~Hg~~~~~~~~~vL~~i~~FL~~hp~E--v-Vil~~~~~~~~~~~~~~~~~l 160 (318)
.-+.+.+..||+|+++|+.-.+ ...+|+-...-++.+++.+.++-.++|.- + +|+-+-+....+...+..+..
T Consensus 119 ~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r~~~~~~~~~~~~~a 195 (371)
T 2pgf_A 119 HAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHEAANIKASADFC 195 (371)
T ss_dssp HHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEESSTTCCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCHHHHHHHHHHH
Confidence 4577888999999999985322 11222211112333556677777778532 3 555555443333333333333
No 21
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=20.99 E-value=2.8e+02 Score=23.71 Aligned_cols=61 Identities=15% Similarity=0.153 Sum_probs=38.5
Q ss_pred cCHHHHHHccCeEeeeeecC----cceEEecc---c-----------CCccHHHH-------------HHHHHHHHhcCC
Q 021031 88 LSIYKQLVLGARVIDIRIQE----DRRVCHGI---L-----------LTYSVDVV-------------INDVKKFLAETD 136 (318)
Q Consensus 88 ~si~~QL~~GIRyfDlRv~~----~~~~~Hg~---~-----------~~~~~~~v-------------L~~i~~FL~~hp 136 (318)
.++..=++.|+.++.+.|+. .+.++|.. . ...+++++ |+++.+++..+|
T Consensus 27 ~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~g~v~~~t~~eL~~l~~~~~~~iptL~evl~~~~~~~ 106 (258)
T 2o55_A 27 RSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGTSRIGDLSLEELKRLDVGGGHTIPSLEELFVAIEEQK 106 (258)
T ss_dssp HHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTTCBGGGSCHHHHTTCBSSSSCBCCBHHHHHHHHHHSC
T ss_pred HHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCCCeehhhCcHHHHhhcCCCCCCccCCHHHHHHHhhhhc
Confidence 35666778899999777753 47888876 2 11233332 455555666665
Q ss_pred -CcEEEEEeeeCC
Q 021031 137 -SEIIILEIRTEF 148 (318)
Q Consensus 137 -~EvVil~~~~~~ 148 (318)
+=.+.++++...
T Consensus 107 ~~~~l~iEiK~~~ 119 (258)
T 2o55_A 107 FNLKLNLELKGEE 119 (258)
T ss_dssp SCCEEEEEECCSS
T ss_pred CceEEEEEEccCC
Confidence 456889998754
Done!