BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021036
(318 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P47025|MDV1_YEAST Mitochondrial division protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MDV1 PE=1 SV=1
Length = 714
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 35/200 (17%)
Query: 84 FSILAVGGRSGKVSLWRICVPK--CYSVEDCKVPTTAVL---IGLFQAHNSWITSISLAV 138
+ L GGR + LW + + + ++ PT + + F+AH +T++SL
Sbjct: 453 YGTLVTGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDSPCVHTFEAHTDEVTALSL-- 510
Query: 139 LSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLS 198
+P LV+GS D ++R WD L+ + S + T V +S S
Sbjct: 511 ------DPS-FLVSGSQDRTIRQWD-----LRSGKCLQTIDLSFANVLTTSTNVDLSK-S 557
Query: 199 LILPVQSPRLML---------LAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLA 249
+L ++ R + LA G G LW D+ K + + H +T L
Sbjct: 558 TLLTQRNERPSIGALQSFDAALATGTKDGVVRLW--DLRSGKV--IRTLKGHTDAITSLK 613
Query: 250 WAFDGCCLYSCSQDNFVRSW 269
FD CL + S D VR W
Sbjct: 614 --FDSACLVTGSYDRTVRIW 631
>sp|A6ZQL5|MDV1_YEAS7 Mitochondrial division protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MDV1 PE=3 SV=1
Length = 714
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 35/200 (17%)
Query: 84 FSILAVGGRSGKVSLWRICVPK--CYSVEDCKVPTTAVL---IGLFQAHNSWITSISLAV 138
+ L GGR + LW + + + ++ PT + + F+AH +T++SL
Sbjct: 453 YGTLVTGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDSPCVYTFEAHTDEVTALSL-- 510
Query: 139 LSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLS 198
+P LV+GS D ++R WD L+ + S + T V +S S
Sbjct: 511 ------DPS-FLVSGSQDRTIRQWD-----LRSGKCLQTIDLSFANVLTTSTNVDLSK-S 557
Query: 199 LILPVQSPRLML---------LAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLA 249
+L ++ R + LA G G LW D+ K + + H +T L
Sbjct: 558 TLLTQRNERPSIGALQSFDAALATGTKDGVVRLW--DLRSGKV--IRTLKGHTDAITSLK 613
Query: 250 WAFDGCCLYSCSQDNFVRSW 269
FD CL + S D VR W
Sbjct: 614 --FDSACLVTGSYDRTVRIW 631
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 77/185 (41%), Gaps = 44/185 (23%)
Query: 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144
S LA G V LW I KC + FQ H SW+ S+ V + D S
Sbjct: 1213 STLASGSSDQTVRLWEINSSKC--------------LCTFQGHTSWVNSV---VFNPDGS 1255
Query: 145 NPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQ 204
+L +GSSD +VR+WD + + + H VN+V
Sbjct: 1256 ----MLASGSSDKTVRLWDISSSKCLHTFQGH---------TNWVNSVAF---------- 1292
Query: 205 SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN 264
+P +LA G G + LW +IS +K + ++ H V+ + ++ DG L S S D
Sbjct: 1293 NPDGSMLASGSGDQTVRLW--EISSSKC--LHTFQGHTSWVSSVTFSPDGTMLASGSDDQ 1348
Query: 265 FVRSW 269
VR W
Sbjct: 1349 TVRLW 1353
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 88/229 (38%), Gaps = 62/229 (27%)
Query: 78 NGSSNWF---------SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN 128
G +NW S+LA G V LW I KC + FQ H
Sbjct: 1281 QGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKC--------------LHTFQGHT 1326
Query: 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVT 188
SW++S++ S +L +GS D +VR+W + C+ ++ L
Sbjct: 1327 SWVSSVTF-------SPDGTMLASGSDDQTVRLW--------SISSGECL-YTFLGHTNW 1370
Query: 189 VNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGL 248
V +V + SP +LA G G + LW IS K + + H+ V +
Sbjct: 1371 VGSV----------IFSPDGAILASGSGDQTVRLWS--ISSGKC--LYTLQGHNNWVGSI 1416
Query: 249 AWAFDGCCLYSCSQDNFVRSW---------IFHGNSLSQVSIPTNTPGL 288
++ DG L S S D VR W HG+ S S+ ++ GL
Sbjct: 1417 VFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGL 1465
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 75/199 (37%), Gaps = 53/199 (26%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+ A G G V W K + CK HNSW+ S+ S
Sbjct: 878 LFATGDSGGIVRFWEAATGK--ELLTCK------------GHNSWVNSVGF-------SQ 916
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
+L +GS D +VR+WD + K+ + H S ++ VV S
Sbjct: 917 DGKMLASGSDDQTVRLWDISSGQCLKTFKGHT---SRVRSVVF----------------S 957
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P ++LA G + LW DIS + + + H V +A+ DG L + S D
Sbjct: 958 PNSLMLASGSSDQTVRLW--DISSGECLYI--FQGHTGWVYSVAFNLDGSMLATGSGDQT 1013
Query: 266 VRSW---------IFHGNS 275
VR W IF G++
Sbjct: 1014 VRLWDISSSQCFYIFQGHT 1032
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 81/211 (38%), Gaps = 54/211 (25%)
Query: 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144
S+LA G V LW I +C+ + FQ H S + S+ V SSD +
Sbjct: 1003 SMLATGSGDQTVRLWDISSSQCFYI--------------FQGHTSCVRSV---VFSSDGA 1045
Query: 145 NPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVV---------------TV 189
+L +GS D +VR+WD + + H S ++ VV V
Sbjct: 1046 ----MLASGSDDQTVRLWDISSGNCLYTLQGHT---SCVRSVVFSPDGAMLASGGDDQIV 1098
Query: 190 NTVPISVLSLILPVQ-----------SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY 238
IS + + +Q SP + LA G LW DIS K + +
Sbjct: 1099 RLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLW--DISSKKC--LYTL 1154
Query: 239 NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
H V +A++ DG L S S D VR W
Sbjct: 1155 QGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 57/218 (26%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+LA G V LW I +C + F+ H S + S+ V S +S
Sbjct: 920 MLASGSDDQTVRLWDISSGQC--------------LKTFKGHTSRVRSV---VFSPNS-- 960
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHC-----VPFSLLKEVVTVNTVPISVLSLI 200
++L +GSSD +VR+WD E + H V F+L
Sbjct: 961 --LMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGS--------------- 1003
Query: 201 LPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSC 260
+LA G G + LW DIS ++ + + H V + ++ DG L S
Sbjct: 1004 ---------MLATGSGDQTVRLW--DISSSQCFYI--FQGHTSCVRSVVFSSDGAMLASG 1050
Query: 261 SQDNFVRSW-IFHGNSLSQVSIPTNTPGLQSCTDLPDA 297
S D VR W I GN L ++ +T ++S PD
Sbjct: 1051 SDDQTVRLWDISSGNCL--YTLQGHTSCVRSVVFSPDG 1086
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 45/192 (23%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+LA G V LW I +C + +FQ H W+ S++ + S
Sbjct: 962 MLASGSSDQTVRLWDISSGEC--------------LYIFQGHTGWVYSVAFNLDGS---- 1003
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
+L TGS D +VR+WD + + H S ++ VV S
Sbjct: 1004 ---MLATGSGDQTVRLWDISSSQCFYIFQGHT---SCVRSVVF----------------S 1041
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
+LA G + LW DIS + + + H V + ++ DG L S D
Sbjct: 1042 SDGAMLASGSDDQTVRLW--DISSG--NCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQI 1097
Query: 266 VRSW-IFHGNSL 276
VR W I GN L
Sbjct: 1098 VRLWDISSGNCL 1109
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 68/185 (36%), Gaps = 44/185 (23%)
Query: 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144
++LA GG V LW I C + Q + SW+ V S +
Sbjct: 1087 AMLASGGDDQIVRLWDISSGNC--------------LYTLQGYTSWV---RFLVFSPNG- 1128
Query: 145 NPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQ 204
V L GSSD VR+WD + C+ ++L VN V
Sbjct: 1129 ---VTLANGSSDQIVRLWD--------ISSKKCL-YTLQGHTNWVNAVAF---------- 1166
Query: 205 SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN 264
SP LA G G + LW DIS +K + H V + + DG L S S D
Sbjct: 1167 SPDGATLASGSGDQTVRLW--DISSSKCLYI--LQGHTSWVNSVVFNPDGSTLASGSSDQ 1222
Query: 265 FVRSW 269
VR W
Sbjct: 1223 TVRLW 1227
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 44/184 (23%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+LA GG +V+LW I P C I H S + S+ L +
Sbjct: 35 LLATGGDDCRVNLWSINKPNC--------------IMSLTGHTSPVESVRL-------NT 73
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
P+ L+V GS GS+R+WD ++ ++ H ++ SL
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA----------------NICSLDF---H 114
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P +A G + LW DI + V Y H Q V L ++ DG L S + D+
Sbjct: 115 PYGEFVASGSQDTNIKLW--DI--RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 266 VRSW 269
V+ W
Sbjct: 171 VKLW 174
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 44/184 (23%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+LA GG +V+LW I P C I H S + S+ L +
Sbjct: 35 LLATGGDDCRVNLWSINKPNC--------------IMSLTGHTSPVESVRL-------NT 73
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
P+ L+V GS GS+R+WD ++ ++ H ++ SL
Sbjct: 74 PEELIVAGSQSGSIRVWDLEAAKILRTLMGHKA----------------NICSLDF---H 114
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P +A G + LW DI + V Y H Q V L ++ DG L S + D+
Sbjct: 115 PYGEFVASGSQDTNIKLW--DI--RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 266 VRSW 269
V+ W
Sbjct: 171 VKLW 174
>sp|Q5EBD9|ELP2_XENTR Elongator complex protein 2 OS=Xenopus tropicalis GN=elp2 PE=2 SV=1
Length = 824
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 35/187 (18%)
Query: 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP 146
L GG KV +W I KC + P A + H + ++ AV + S N
Sbjct: 76 LVSGGSDKKVIIWAIEKNKC------EQPVAA------EGHTEVVNAVH-AVYTQRSEN- 121
Query: 147 QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVP-FSLLKEVVTVNTVPISVL-SLILPVQ 204
++L+V+ +SD +VR+W L+++ + C+ S K V V IS L ++PV
Sbjct: 122 ELLIVSAASDCTVRLW------LRRNVKTECLQTLSFGKGFVL--DVCISFLPGSLVPV- 172
Query: 205 SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLY--SCSQ 262
LA G L+ + +F+K + H+ + G+ WA G L+ SC+Q
Sbjct: 173 ------LACGADDSRIHLYV--LQNEQFEKTQVLHGHEDWIRGVEWAVTGQNLFLASCAQ 224
Query: 263 DNFVRSW 269
D +R W
Sbjct: 225 DCLIRIW 231
>sp|Q54D08|LST8_DICDI Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1
Length = 304
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 90/263 (34%), Gaps = 56/263 (21%)
Query: 63 SPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIG 122
SP + K V G + G G V +W + P C +C P V++
Sbjct: 67 SPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAPVNTVVLH 126
Query: 123 LFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD----GYIQELQKSAEAHCV 178
QA L++G +GS+R+WD +EL E
Sbjct: 127 PNQAE----------------------LISGDQNGSIRVWDLISNTCSRELVPDGEVGIT 164
Query: 179 PFSLLKE---VVTVNT--------VPISVLSLILPVQ--------------SPRLMLLAV 213
++ + VV NT + S P+Q SP LLA
Sbjct: 165 SLTISSDGGLVVASNTKGKCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLAT 224
Query: 214 GKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH- 272
+ +W + KF+ V + N H + V A++ D L + S D+ R W H
Sbjct: 225 CSADHTVKIW----NTKKFNVVQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQ 280
Query: 273 GNSLSQVSIPTNTPGLQSCTDLP 295
G+++ S + DLP
Sbjct: 281 GDAVKTYSGHIKAVNAVALNDLP 303
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
P ++L T S D +++ WD +S + C F + + +T + + I+ +
Sbjct: 2 PGIILATASYDHTIKFWDPPSGGCYRSID--CGEFHINRLEITHDKLYIAAAG------N 53
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P+ L +++ N S++ H VTG+ + +G +Y+ S+D
Sbjct: 54 PQTRLF--------------EVNTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGT 99
Query: 266 VRSW 269
V+ W
Sbjct: 100 VKIW 103
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR 207
LL + S D +V++WD +++++ + H K V+ V+ PR
Sbjct: 118 TLLASASEDATVKLWDWEAGDMERTLKGHT------KAVMDVDF-------------DPR 158
Query: 208 LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVR 267
L+A + LW + N++ V + + HD V+ + + DG L S S+D +R
Sbjct: 159 GGLMATCSSDLTLKLWD---TANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIR 215
Query: 268 SW 269
W
Sbjct: 216 VW 217
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR 207
LL + S D +V++WD +++++ + H K V+ V+ PR
Sbjct: 118 TLLASASEDATVKLWDWEAGDMERTLKGHT------KAVMDVDF-------------DPR 158
Query: 208 LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVR 267
L+A + LW + N++ V + + HD V+ + + DG L S S+D +R
Sbjct: 159 GGLMATCSSDLTLKLWD---TANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIR 215
Query: 268 SW 269
W
Sbjct: 216 VW 217
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 49/120 (40%), Gaps = 23/120 (19%)
Query: 150 LVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM 209
+ TGS+D +VR+WD +CV + T + PI L+ SP
Sbjct: 643 VATGSADRTVRLWD--------VLNGNCV------RIFTGHKGPIHSLTF-----SPNGR 683
Query: 210 LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
LA G G LW DI VG H V L ++ DG L S S DN VR W
Sbjct: 684 FLATGATDGRVLLW--DIGHGLM--VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
>sp|A7THX0|MDV1_VANPO Mitochondrial division protein 1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=MDV1 PE=3 SV=1
Length = 706
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 78/206 (37%), Gaps = 33/206 (16%)
Query: 84 FSILAVGGRSGKVSLWRICVP-KCYSVEDCKVPTT-AVLIGLFQAHNSWITSISLAVLSS 141
+++L GG+ + +W I + + Y + + + I F +H+ IT++S
Sbjct: 451 YNMLITGGKDAMLKIWDINLATQLYQEDQSSIESDYNSCIHTFDSHSGGITALSF----- 505
Query: 142 DSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLIL 201
V LV+ S D ++R WD C+ L VV N I +
Sbjct: 506 ----DSVHLVSASQDKTIRQWD--------LVNGKCIQTIDLSSVVKQNQTDIVNIPDFY 553
Query: 202 PVQSPRLM--------LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253
P + LA G G LW D+ K V ++ H VT L FD
Sbjct: 554 SSSEPFVTGSLQCFDAALATGTRDGLVRLW--DMRSGKV--VRTFMGHTNAVTSLK--FD 607
Query: 254 GCCLYSCSQDNFVRSWIFHGNSLSQV 279
L S S D +R+W SLS +
Sbjct: 608 SYNLISGSLDKSIRTWDLRTGSLSDL 633
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 49/120 (40%), Gaps = 23/120 (19%)
Query: 150 LVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM 209
+ TGS+D +VR+WD +CV + T + PI L+ SP
Sbjct: 642 VATGSADRTVRLWD--------VLNGNCV------RIFTGHKGPIHSLTF-----SPNGR 682
Query: 210 LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
LA G G LW DI VG H V L ++ DG L S S DN VR W
Sbjct: 683 FLATGATDGRVLLW--DIGHGLM--VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 45/196 (22%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
++A GG +V LW + P C I H + + S+ +N
Sbjct: 35 LVATGGDDCRVHLWSVNKPNC--------------IMSLTGHTTPVESVRF-------NN 73
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
+ L+V GS GS+RIWD EA + +L+ V+++
Sbjct: 74 SEELIVAGSQSGSLRIWD---------LEAAKILRTLMGHKANVSSLDF----------H 114
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P +A G + LW + V Y H Q V L ++ DG L S S D+
Sbjct: 115 PYGEFVASGSLDTNIKLW----DVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHS 170
Query: 266 VRSW-IFHGNSLSQVS 280
V+ W + G ++++S
Sbjct: 171 VKLWDLTAGKMMAELS 186
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 45/185 (24%)
Query: 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144
S++A G R G LW + ++V + H ++ +++ S D S
Sbjct: 556 SMVASGSRDGTARLWNVATGTEHAV--------------LKGHTDYVYAVAF---SPDGS 598
Query: 145 NPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQ 204
++ +GS DG++R+WD + KE + +V+SL
Sbjct: 599 ----MVASGSRDGTIRLWD----------------VATGKERDVLQAPAENVVSLAF--- 635
Query: 205 SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN 264
SP +L G S + LW D++ + + ++ H V +A++ DG L S S D
Sbjct: 636 SPDGSMLVHGSDS-TVHLW--DVASGE--ALHTFEGHTDWVRAVAFSPDGALLASGSDDR 690
Query: 265 FVRSW 269
+R W
Sbjct: 691 TIRLW 695
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 30/146 (20%)
Query: 124 FQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLL 183
+ H W+ +++ S D + LL +GS D +VR+WD E + E H
Sbjct: 497 LEGHTDWVRAVAF---SPDGA----LLASGSDDATVRLWDVAAAEERAVFEGHT------ 543
Query: 184 KEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ 243
VL + SP ++A G G+ LW H
Sbjct: 544 ----------HYVLDIAF---SPDGSMVASGSRDGTARLWNVATGTEH----AVLKGHTD 586
Query: 244 VVTGLAWAFDGCCLYSCSQDNFVRSW 269
V +A++ DG + S S+D +R W
Sbjct: 587 YVYAVAFSPDGSMVASGSRDGTIRLW 612
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 34/122 (27%)
Query: 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKV---------PTTAVLIG------------- 122
S++A G R G + LW + K V P ++L+
Sbjct: 598 SMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVAS 657
Query: 123 -----LFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHC 177
F+ H W+ +++ S D + LL +GS D ++R+WD QE + E H
Sbjct: 658 GEALHTFEGHTDWVRAVAF---SPDGA----LLASGSDDRTIRLWDVAAQEEHTTLEGHT 710
Query: 178 VP 179
P
Sbjct: 711 EP 712
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 99/264 (37%), Gaps = 59/264 (22%)
Query: 42 LITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRI 101
+ T Y + + HS AV + R SS+ +L GG KV+LW I
Sbjct: 1 MTTKRAYKLQEFVAHSAAVNCLKIGRKSSR--------------VLVTGGEDHKVNLWAI 46
Query: 102 CVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRI 161
P ++ L+ H+S I S++ D+S +VL+ G++ G++++
Sbjct: 47 GKPNA-------------ILSLY-GHSSGIDSVTF-----DAS--EVLVAAGAASGTIKL 85
Query: 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFD 221
WD L+E V T+ + I P A G +
Sbjct: 86 WD-------------------LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 222 LWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSI 281
+W DI K + +Y H + V L + DG + S +DN V+ W L
Sbjct: 127 IW--DI--RKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL-LTEF 181
Query: 282 PTNTPGLQSCTDLPDAFVSCLGMA 305
++ +QS P F+ G A
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSA 205
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 34/158 (21%)
Query: 121 IGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPF 180
IGL Q H SW+ + A S D +VT S+DG+ R+WD + C F
Sbjct: 1171 IGLCQGHTSWVRN---AQFSPDGQ----WIVTCSADGTARLWD---------LSSQC--F 1212
Query: 181 SLLKEVVT-VNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN 239
++LK VN + SP + G+ +W C +G+
Sbjct: 1213 AVLKGHQNWVNNA----------LWSPDGQHIITSSSDGTARVWSRHGKC-----LGTLR 1257
Query: 240 AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277
HD + G ++ DG + + S DN R W G L+
Sbjct: 1258 GHDHNIHGARFSLDGQKIVTYSTDNTARLWTKEGTLLT 1295
Score = 31.6 bits (70), Expect = 8.0, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 193 PISVLSLILPVQ-SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWA 251
P++VL + ++ +P L+L A G LW + + H + +T L W+
Sbjct: 1012 PVTVLRISPSMENTPPLVLTATTNGIAY--LWSF-----HGELINVLRGHQEAITALDWS 1064
Query: 252 FDGCCLYSCSQDNFVRSWIFHGNSLSQV 279
DG + S D+ V+ W HG ++ +
Sbjct: 1065 ADGQYFATASADHTVKLWQRHGEEVATL 1092
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 109/296 (36%), Gaps = 55/296 (18%)
Query: 9 SNKMKDSNTHPTVAASKSKGNSITKIPS---------NCCLPLITADQYASRSAMLHSLA 59
S++ + T+PT+ G+ IT +P + +P T S ++ HS+
Sbjct: 367 SHRNRRRKTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTM---CSAGSLDHSVK 423
Query: 60 VAWSPVLRLSSKKYPVPQNG--------SSNWFSILAVGGRSGKVSLWRICVPKCYSVED 111
V W LS KK +G + +S L GGR + LW I +
Sbjct: 424 V-WD----LSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASN 478
Query: 112 CKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQK 171
A L F +H IT+IS D N LV+GS D +VR WD L
Sbjct: 479 SSEDNDACLY-TFDSHVDEITAISF-----DGDN----LVSGSQDRTVRQWD-----LNS 523
Query: 172 SAEAHCVPFSLLK-EVVTVNTVPISVLSLILPVQSPRL-------MLLAVGKGSGSFDLW 223
+ S + + +P+ S++L + P + LA G G LW
Sbjct: 524 GKCTQTIDISFATGPMRSQRNIPLRN-SVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
Query: 224 KCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQV 279
D+ K V H +T L FD L + + D +R W LS V
Sbjct: 583 --DLRSGKV--VRMLEGHTDAITSL--QFDSVNLVTGAMDRSIRIWDLRTGILSDV 632
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 45/196 (22%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
++A GG +V+LW + P C I H + + S+ +N
Sbjct: 35 LVATGGDDCRVNLWSVNKPNC--------------IMSLTGHTTPVESVRF-------NN 73
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
+ L+V GS GS+R+WD ++ ++ H +V SL
Sbjct: 74 AEELIVAGSQSGSLRVWDLEAAKILRTLMGHKA----------------NVCSLDF---H 114
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P +A G + LW + V Y H Q V L ++ DG L S S D+
Sbjct: 115 PYGDFVASGSLDTNIKLW----DVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHS 170
Query: 266 VRSW-IFHGNSLSQVS 280
V+ W + G ++++S
Sbjct: 171 VKLWDLTAGKMMAELS 186
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 71/184 (38%), Gaps = 44/184 (23%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+LA GG +V++W + P C I H S + I +SS
Sbjct: 35 LLATGGEDCRVNIWAVSKPNC--------------IMSLTGHTSAVGCIQF-----NSSE 75
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
+V V GS GS+R+WD EA + +L+ +++++
Sbjct: 76 ERV--VAGSLSGSLRLWD---------LEAAKILRTLMGHKASISSLDFH---------- 114
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P LA G + LW + V Y H Q V LA++ DG L S S D+
Sbjct: 115 PMGEYLASGSVDSNIKLW----DVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDST 170
Query: 266 VRSW 269
V+ W
Sbjct: 171 VKLW 174
>sp|Q6IA86|ELP2_HUMAN Elongator complex protein 2 OS=Homo sapiens GN=ELP2 PE=1 SV=2
Length = 826
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 67 RLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA 126
R++ ++ Q+GS + + L GG +V W I ED ++ L Q
Sbjct: 60 RVNCIQWICKQDGSPS--TELVSGGSDNQVIHWEI--------EDNQLLKAVHL----QG 105
Query: 127 HNSWITSISLAVLSSDSSNPQV--LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLK 184
H + ++ AV +S+P + L+V+ ++D +VR+W +K E C L+
Sbjct: 106 HEGPVYAVH-AVYQRRTSDPALCTLIVSAAADSAVRLWS------KKGPEVMC-----LQ 153
Query: 185 EVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQV 244
+ N +++ LP + + +LA G ++ ++F KV S H+
Sbjct: 154 TLNFGNGFALALCLSFLP--NTDVPILACGNDDCRIHIFA--QQNDQFQKVLSLCGHEDW 209
Query: 245 VTGLAWAFDGCCLY--SCSQDNFVRSWIFHGNSLS 277
+ G+ WA G L+ SCSQD +R W + S S
Sbjct: 210 IRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTS 244
>sp|Q758R7|MDV1_ASHGO Mitochondrial division protein 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MDV1
PE=3 SV=1
Length = 715
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 32/203 (15%)
Query: 82 NWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSS 141
+ ++ L GGR + +W I ++++ +P+ V I F +H IT++S
Sbjct: 463 DQYNTLITGGRDALLKMWDIQK----AIDNDSIPSDEVCIYTFDSHIDEITALSF----- 513
Query: 142 DSSNPQVLLVTGSSDGSVRIWD----GYIQELQKS-AEAHCVPFSLLKE--VVTVNTVPI 194
+++N LV+GS D ++R WD +Q L + A + S++ + T N PI
Sbjct: 514 EANN----LVSGSQDRTIRQWDLNNGKCVQTLDINFATGGNLSRSMIGSGFLNTNNDHPI 569
Query: 195 SVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG 254
I +Q LA G G LW D+ + V + H VT L FD
Sbjct: 570 -----IGAIQCYD-AALATGTKDGIVRLW--DLRSGRV--VRTLEGHSDAVTSL--QFDS 617
Query: 255 CCLYSCSQDNFVRSWIFHGNSLS 277
L + S DN +R W +L+
Sbjct: 618 LNLVTGSLDNSIRIWDLRTGTLA 640
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=slr0143 PE=4 SV=1
Length = 1191
Score = 41.2 bits (95), Expect = 0.012, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 19/161 (11%)
Query: 125 QAHNSWITSISLAV---LSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFS 181
Q +W T IS L + ++PQ + + G V++W G ++ VP
Sbjct: 922 QLLKTWRTDISRVYDVDLRTTPTSPQWAIAMATGSGEVQLWQGTKNNQTSGNQSQGVPIE 981
Query: 182 LLKEVVTV--NTV----PISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV 235
L +V N++ PI +SL P L LA G G+ LW D + +
Sbjct: 982 LNDPIVLALGNSIQRKEPIRSVSL-----HPTLPQLAAGDEQGNLTLWNFDGTL-----I 1031
Query: 236 GSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276
S AH + L ++ +G L S ++ + W G L
Sbjct: 1032 RSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVEGQLL 1072
>sp|B2B766|LIS12_PODAN Nuclear distribution protein PAC1-2 OS=Podospora anserina (strain S
/ ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=PAC1-2 PE=3
SV=1
Length = 468
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 107/273 (39%), Gaps = 57/273 (20%)
Query: 45 ADQYAS-RSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSN-WFSILAVGGRSGKVSLWRIC 102
ADQY + R+ H V SS ++ VP NG++ ++L + + LW +
Sbjct: 194 ADQYKNIRTLHGHDHIV--------SSVRF-VPANGTAGAGGNLLVSASKDNTLKLWDV- 243
Query: 103 VPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIW 162
TT + + HN W +++ S++ + LL TGS D + R+W
Sbjct: 244 -------------TTGYCVKTIEGHNDWPRAVA------PSADGRWLLSTGS-DKAARLW 283
Query: 163 D--GYIQELQKSAEAHCVPFSLLKEVVTVNTVP----ISVLSLILPVQSPRLMLLAVGKG 216
D G E + H F+L E + P ++ + P S +A G
Sbjct: 284 DIGGTEPECRVVMFGH-ENFNLCCEFAPSTSYPHLARLAGHEKVPPANSA-AEFMATGSR 341
Query: 217 SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276
LW C K HD V GLA+ G L S + D +R W L
Sbjct: 342 DKQIRLWDRRGQCIKV-----LEGHDNWVRGLAFHPAGKFLISVADDRTMRCW-----DL 391
Query: 277 SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPG 309
SQ + +Q+ + + D FVSC+ A PG
Sbjct: 392 SQ-----DGKCVQTLSGMFDGFVSCVRWA--PG 417
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 56/225 (24%)
Query: 58 LAVAWSPVLRLSSKKYPVPQNGSSNWFSI-----LAVGGRSGKVSLWRICVPKCYSVEDC 112
L W+ V+RL K + + I LA+ ++ + W P Y++E
Sbjct: 60 LEKKWTSVIRLQKKVLDLQAENAHLKNEIENAGPLALSRKNQDPANWLPKGPPRYTLEGH 119
Query: 113 KVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKS 172
++P T+V V SS L + S D +++IWD + EL+++
Sbjct: 120 RLPITSVAFH--------------PVFSS--------LASASEDNTIKIWDWELGELERT 157
Query: 173 AEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNK 231
+ H K V+ V+ PR LLA S LW ++
Sbjct: 158 LKGHT------KAVLDVD------------FGGPRGNTLLASCSSDMSIKLWD---PADQ 196
Query: 232 FDKVGSYNAHDQVVTGLAW-------AFDGCCLYSCSQDNFVRSW 269
+ + + + HD +V+ + + G L S S+DN ++ W
Sbjct: 197 YKNIRTLHGHDHIVSSVRFVPANGTAGAGGNLLVSASKDNTLKLW 241
>sp|A9V790|LIS1_MONBE Lissencephaly-1 homolog OS=Monosiga brevicollis GN=35260 PE=3 SV=1
Length = 410
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 28/206 (13%)
Query: 117 TAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQK--SAE 174
T + Q H+ W+ SI D S + + SSD +VR+W E + S
Sbjct: 221 TGYCLQTLQGHSDWVRSI-------DVSADGAWICSASSDHTVRVWSVASGECKHVWSDH 273
Query: 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK--GSGSFDLWKCDISCNKF 232
H V + +V L+L++ P + G S S D C +
Sbjct: 274 EHVVEHASFAPLV-----AHEALNLMIFGSKPSAEAASKGPFVASASRDKSICLFDVSTG 328
Query: 233 DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCT 292
+ HD V AW+ G L+S + D +R W +S+ +IP +
Sbjct: 329 QHLARLTGHDNWVRATAWSRGGRYLFSVADDKTMRVWDIATKRVSK-TIPAH-------- 379
Query: 293 DLPDAFVSCLGMAVSPGNLVVAMVQI 318
+ FVSC+ + ++V V +
Sbjct: 380 ---NHFVSCIAVHAKNTHVVTGSVDL 402
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 166 IQELQKSAEA-HCVPFSLLKEVVTVNTVPISVLSLILPVQS----PRLMLLAVGKGSGSF 220
++EL+ SA A + ++E V ++V LP+ + P ++A S
Sbjct: 71 VEELRSSARAPRSRTTTKMEEWVPRPPATVAVDGHRLPITAVAIHPSFAVMASASEDASI 130
Query: 221 DLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
LW D+ F++ S H V +A+ +G L SCS D ++ W
Sbjct: 131 KLW--DMESGNFER--SLKGHTNAVNDIAYDREGNRLVSCSTDMTIKVW 175
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 36/146 (24%)
Query: 134 ISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVP 193
+ + S DSS+ LV+G SDGS+ +WD + L+++ VN
Sbjct: 100 VRVCAFSPDSSH----LVSGGSDGSIALWDFTSRTLRRTG--------------VVNDTS 141
Query: 194 ISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHD------QVVTG 247
I S +P + G G LW D++ N NAHD Q
Sbjct: 142 IVACSF-----TPCGQMFITGSTYGDLRLW--DLNMNHLH--AEKNAHDLGVSCAQFAPK 192
Query: 248 LAWAFDGCC---LYSCSQDNFVRSWI 270
+ DGC L SC QD+ ++ WI
Sbjct: 193 MMKGTDGCVQFRLASCGQDSLLKIWI 218
>sp|Q9DB94|WDR53_MOUSE WD repeat-containing protein 53 OS=Mus musculus GN=Wdr53 PE=2 SV=1
Length = 358
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144
+I + G GKV ++R+ KC +G F+ H ++ + SS
Sbjct: 210 NIFSCGAEDGKVRIFRVMGVKCERE-----------LG-FKGHTLGVSQVCFLPESS--- 254
Query: 145 NPQVLLVTGSSDGSVRIWD--GYIQELQKSAEAH 176
LL+TG +DG +R+WD G +++LQKS H
Sbjct: 255 ----LLLTGGNDGRIRLWDVSGKMEKLQKSPARH 284
>sp|A8NEG8|LIS1_COPC7 Nuclear distribution protein PAC1 OS=Coprinopsis cinerea (strain
Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=PAC1
PE=3 SV=3
Length = 434
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 24/156 (15%)
Query: 121 IGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPF 180
+ H+ W+ + + S+D + +L +GS D +VR+WD E + H
Sbjct: 228 VRTLSGHSEWVRCV---IPSADGT----MLASGSKDQTVRLWDPLTGEPKSELRGHE--- 277
Query: 181 SLLKEVVTVNTVPISVLSLI-----LPVQSPRL--MLLAVGKGSGSFDLWKCDISCNKFD 233
+V V PIS + I +P + + LA G + LW D +
Sbjct: 278 ---NDVEAVAFAPISAYAAIRELAGIPNDRTKRHGLFLASGARDKTVKLW--DTQTGQM- 331
Query: 234 KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
+ + HD V LA+ G L S S D VR W
Sbjct: 332 -IRNLAGHDNWVRALAFHPSGKYLLSSSDDKTVRVW 366
>sp|Q5TTP0|WDY_ANOGA WD repeat-containing protein on Y chromosome OS=Anopheles gambiae
GN=WDY PE=4 SV=4
Length = 1059
Score = 40.0 bits (92), Expect = 0.023, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 24/50 (48%)
Query: 235 VGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTN 284
+ SY AH VTGL + D L SCS D VR W G + + P N
Sbjct: 844 LNSYQAHRACVTGLTYLDDTGLLLSCSSDRTVRLWTLGGRYIGLLGSPVN 893
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 44/184 (23%)
Query: 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145
+LA GG +V++W + P C + H + I S+ + S
Sbjct: 35 LLATGGDDCRVNVWSVNKPNC--------------VMSLTGHTTPIESLQI-------SA 73
Query: 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
+ L+V GS GS+R+WD EA + +LL + ++
Sbjct: 74 KEELIVAGSQSGSIRVWD---------LEAAKILRTLLGHKANICSLDF----------H 114
Query: 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNF 265
P +A G LW + + Y +H Q V L ++ DG L S + D+
Sbjct: 115 PYGSFVASGSLDTDIKLW----DVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHT 170
Query: 266 VRSW 269
V+ W
Sbjct: 171 VKLW 174
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 125 QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-QELQKSAEAHCVPFSLL 183
Q H W+ SIS S D L +G +G + +WD +++ ++ H
Sbjct: 154 QGHRHWVLSISW---SPDGKK----LASGCKNGQILLWDPSTGKQVGRALTGHS------ 200
Query: 184 KEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ 243
K + ++ P+ +P +A GS +W D + + ++ + H Q
Sbjct: 201 KWITALSWEPLHA--------NPECRYVASSSKDGSVRVW--DTTAGRCER--TLTGHAQ 248
Query: 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276
VT L W DG LYS SQD ++ W H L
Sbjct: 249 SVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVL 280
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGL-FQAHNSWITSISLAVLSSDSSN 145
LA G ++G++ LW P+T +G H+ WIT++S L + N
Sbjct: 172 LASGCKNGQILLWD--------------PSTGKQVGRALTGHSKWITALSWEPLHA---N 214
Query: 146 PQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLK 184
P+ V SS DGSVR+WD +++ H + L+
Sbjct: 215 PECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLR 254
>sp|Q15061|WDR43_HUMAN WD repeat-containing protein 43 OS=Homo sapiens GN=WDR43 PE=1 SV=3
Length = 677
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Query: 143 SSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVT-VNTVPISVLSLIL 201
S + Q S+DG +R+W+ L + VP + L T + P + +
Sbjct: 22 SPHSQAYFALASTDGHLRVWETANNRLHQEY----VPSAHLSGTCTCLAWAPARLQAKES 77
Query: 202 PVQSPRLM----------LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWA 251
P + R LLA+G GS L+ + K+ S HD V + W
Sbjct: 78 PQRKKRKSEAVGMSNQTDLLALGTAVGSILLYST-VKGELHSKLIS-GGHDNRVNCIQWH 135
Query: 252 FDGCCLYSCSQDNFVRSW 269
D CLYSCS D + W
Sbjct: 136 QDSGCLYSCSDDKHIVEW 153
>sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=4
Length = 485
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 29/154 (18%)
Query: 125 QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLK 184
+ H W+ SIS S D L +G +G V +WD P + L+
Sbjct: 153 KGHRHWVLSISW---SPDGKK----LASGCKNGQVLLWD---------------PSTGLQ 190
Query: 185 --EVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHD 242
+T ++ I+ LS +P +A GS +W D + + +++ H
Sbjct: 191 VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW--DTTAGRCERI--LTGHT 246
Query: 243 QVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276
Q VT L W DG LYS SQD ++ W H L
Sbjct: 247 QSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVL 279
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIG-LFQAHNSWITSISLAVLSSDSSN 145
LA G ++G+V LW P+T + +G H+ WIT +S L N
Sbjct: 171 LASGCKNGQVLLWD--------------PSTGLQVGRTLTGHSKWITGLSWEPLHM---N 213
Query: 146 PQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLK 184
P+ V SS DGSVR+WD ++ H + L+
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR 253
>sp|Q5RFF8|NLE1_PONAB Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3
Length = 485
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 125 QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-QELQKSAEAHCVPFSLL 183
+ H W+ SIS S D L +G +G + +WD +++ ++ H
Sbjct: 153 KGHRHWVLSISW---SPDGKK----LASGCKNGQILLWDPSTGKQVGRTLAGHS------ 199
Query: 184 KEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ 243
K + ++ P+ +P +A GS +W D + + +++ H Q
Sbjct: 200 KWITGLSWEPLHA--------NPECRYVASSSKDGSVRIW--DTTAGRCERI--LTGHTQ 247
Query: 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276
VT L W DG LYS SQD ++ W H L
Sbjct: 248 SVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVL 279
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIG-LFQAHNSWITSISLAVLSSDSSN 145
LA G ++G++ LW P+T +G H+ WIT +S L + N
Sbjct: 171 LASGCKNGQILLWD--------------PSTGKQVGRTLAGHSKWITGLSWEPLHA---N 213
Query: 146 PQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLK 184
P+ V SS DGSVRIWD ++ H + L+
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLR 253
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 30/153 (19%)
Query: 117 TAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176
T + + H S++ S A PQ L+ TGS DG+V++WD ++K A
Sbjct: 141 TGERVKRLKGHTSFVNSCYPA-----RRGPQ-LVCTGSDDGTVKLWD-----IRKKAAVQ 189
Query: 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236
+ VT N ++S G +W D+ NK
Sbjct: 190 TFQNTYQVLAVTFNDTSDQIIS---------------GGIDNDIKVW--DLRQNKL--TY 230
Query: 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
+ H VTGL+ + +G L S + DN VR W
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>sp|Q9NVX2|NLE1_HUMAN Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=4
Length = 485
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 125 QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-QELQKSAEAHCVPFSLL 183
+ H W+ SIS S D L +G +G + +WD +++ ++ H
Sbjct: 153 KGHRHWVLSISW---SPDGRK----LASGCKNGQILLWDPSTGKQVGRTLAGHS------ 199
Query: 184 KEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ 243
K + ++ P+ +P +A GS +W D + + +++ H Q
Sbjct: 200 KWITGLSWEPLHA--------NPECRYVASSSKDGSVRIW--DTTAGRCERI--LTGHTQ 247
Query: 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276
VT L W DG LYS SQD ++ W H L
Sbjct: 248 SVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVL 279
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIG-LFQAHNSWITSISLAVLSSDSSN 145
LA G ++G++ LW P+T +G H+ WIT +S L + N
Sbjct: 171 LASGCKNGQILLWD--------------PSTGKQVGRTLAGHSKWITGLSWEPLHA---N 213
Query: 146 PQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLK 184
P+ V SS DGSVRIWD ++ H + L+
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLR 253
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 124 FQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLL 183
F+ H W+ +++A SD S L+ + S+D +VRIW +E ++ H +
Sbjct: 229 FEGHREWVRRVAVA---SDGS----LMASCSNDQTVRIWSLSSKECKEELRGHEHVVECI 281
Query: 184 KEV-VTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHD 242
K + N +P LA G +W + F VG HD
Sbjct: 282 KWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLFSLVG----HD 337
Query: 243 QVVTGLAWAFDGCCLYSCSQDNFVRSW 269
V GLA+ G L S S D ++ W
Sbjct: 338 NWVRGLAFHAGGKYLTSASDDKTIKIW 364
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 23/103 (22%)
Query: 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITS 133
VP+ S F LA G R + +W + TTAV + H++W+
Sbjct: 299 EVPKGQKSGPF--LASGSRDRVIKIWDV--------------TTAVCLFSLVGHDNWVRG 342
Query: 134 ISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176
++ L + S D +++IW+ + KS EAH
Sbjct: 343 LAFHAGGK-------YLTSASDDKTIKIWELRHKRCSKSLEAH 378
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 30/153 (19%)
Query: 117 TAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176
T + + H S++ S A PQ L+ TGS DG+V++WD ++K A
Sbjct: 141 TGERVKRLKGHTSFVNSCYPA-----RRGPQ-LVCTGSDDGTVKLWD-----IRKKAAIQ 189
Query: 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236
+ VT N ++S G +W D+ NK
Sbjct: 190 TFQNTYQVLAVTFNDTSDQIIS---------------GGIDNDIKVW--DLRQNKL--TY 230
Query: 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
+ H VTGL+ + +G L S + DN VR W
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
>sp|Q6ZQL4|WDR43_MOUSE WD repeat-containing protein 43 OS=Mus musculus GN=Wdr43 PE=1 SV=2
Length = 677
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 11/135 (8%)
Query: 143 SSNPQVLLVTGSSDGSVRIWD--------GYIQELQKSAEAHCVPFSLLKEVVTVNTVPI 194
S + Q SSDG +R+W+ Y+ S C+ ++ + +
Sbjct: 22 SPDSQAYFALASSDGQLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESHQRK 81
Query: 195 SVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG 254
S + + + LLA+G GS L+ + K+ S H+ V + W D
Sbjct: 82 KRKSEVTGTKD-QADLLALGTAVGSILLYST-VRGELHSKLTS-GGHENRVNCIQWHQDN 138
Query: 255 CCLYSCSQDNFVRSW 269
CLYSCS D ++ W
Sbjct: 139 DCLYSCSDDKYIVEW 153
>sp|P49026|GBLP_TOBAC Guanine nucleotide-binding protein subunit beta-like protein
OS=Nicotiana tabacum GN=ARCA PE=2 SV=1
Length = 326
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 119 VLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCV 178
VL G +AH W+T+I+ AV +SD ++VT S D S+ +W + K + V
Sbjct: 7 VLRGTMRAHTDWVTAIATAVDNSD------MIVTSSRDKSIIVW-----SITKDGPQYGV 55
Query: 179 PFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY 238
P + +T + + + L S M G G LW VG
Sbjct: 56 P----RRRLTGHGHFVQDVVL-----SSDGMFALSGSWDGELRLWDLQAGTTARRFVG-- 104
Query: 239 NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
H + V +A++ D + S S+D +R W
Sbjct: 105 --HTKDVLSVAFSVDNRQIVSASRDKSIRLW 133
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 30/153 (19%)
Query: 117 TAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176
T + + H S++ S A PQ L+ TGS DG+V++WD ++K A
Sbjct: 140 TGERVKRLKGHTSFVNSCYPA-----RRGPQ-LVCTGSDDGTVKLWD-----IRKKAAIQ 188
Query: 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236
+ VT N ++S G +W D+ NK
Sbjct: 189 TFQNTYQVLAVTFNDTSDQIIS---------------GGIDNDIKVW--DLRQNKL--TY 229
Query: 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
+ H VTGL+ + +G L S + DN VR W
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 30/153 (19%)
Query: 117 TAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176
T + + H S++ S A PQ L+ TGS DG+V++WD ++K A
Sbjct: 140 TGERVKRLKGHTSFVNSCYPA-----RRGPQ-LVCTGSDDGTVKLWD-----IRKKAAIQ 188
Query: 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236
+ VT N ++S G +W D+ NK
Sbjct: 189 TFQNTYQVLAVTFNDTSDQIIS---------------GGIDNDIKVW--DLRQNKL--TY 229
Query: 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
+ H VTGL+ + +G L S + DN VR W
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208
++ + S+D ++R+WD + L KS AH V +VN +P
Sbjct: 1502 IIASASADKTIRLWDSFSGNLIKSLPAHN------DLVYSVNF-------------NPDG 1542
Query: 209 MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRS 268
+LA + LW+ + + +++ H VV +++ DG + S S+D V+
Sbjct: 1543 SMLASTSADKTVKLWR----SHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKI 1598
Query: 269 WIFHGNSLSQVSIPTNTPGLQSCTDLPDA 297
W G+ L+ ++P + G+ S PD
Sbjct: 1599 WQIDGHLLT--TLPQHQAGVMSAIFSPDG 1625
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 25/150 (16%)
Query: 150 LVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM 209
+ GS D +V++W H LLK T+N V SL SP
Sbjct: 1212 IAAGSEDKTVKLW-------------HRQDGKLLK---TLNGHQDWVNSLSF---SPDGK 1252
Query: 210 LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
LA + LW+ I+ K V + H+ V + ++ DG + S S+DN ++ W
Sbjct: 1253 TLASASADKTIKLWR--IADGKL--VKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLW 1308
Query: 270 IFHGNSLSQVSIPTNTPGLQSCTDLPDAFV 299
HG L + ++ G+ + LPD+ +
Sbjct: 1309 NRHGIELE--TFTGHSGGVYAVNFLPDSNI 1336
>sp|A6ZZZ8|CAF4_YEAS7 CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CAF4 PE=3 SV=2
Length = 645
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 23/81 (28%)
Query: 83 WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSD 142
+ S LA G + G V LW + V K + L + H ITS+ D
Sbjct: 500 YNSALATGTKDGLVRLWDLRVGKP--------------VRLLEGHTDGITSLKF-----D 540
Query: 143 SSNPQVLLVTGSSDGSVRIWD 163
S LVTGS D SVRIWD
Sbjct: 541 SEK----LVTGSMDNSVRIWD 557
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 58/179 (32%)
Query: 87 LAVGGRSGKVSLWRICVPKCY---------SVEDCKVP------------TTAVLIGLFQ 125
L G R K+ W + KC + D K+P T A +IG Q
Sbjct: 439 LVSGSRDKKIFHWDLTTGKCIQQLDLIFTPTHSDIKMPARSLNNGTCLLGTEAPMIGALQ 498
Query: 126 AHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLK- 184
+NS L TG+ DG VR+WD + + + E H + LK
Sbjct: 499 CYNS-------------------ALATGTKDGLVRLWDLRVGKPVRLLEGHTDGITSLKF 539
Query: 185 ---EVVT---VNTVPI------SVLSLI---LPVQSPRL--MLLAVGKGSGSFDLWKCD 226
++VT N+V I S+L +I LPV S L+ VG G +++ +
Sbjct: 540 DSEKLVTGSMDNSVRIWDLRTSSILDVIAYDLPVSSLDFDGKLITVGANEGGVNVFNME 598
>sp|A8PT44|YTM1_MALGO Ribosome biogenesis protein YTM1 OS=Malassezia globosa (strain ATCC
MYA-4612 / CBS 7966) GN=YTM1 PE=3 SV=1
Length = 528
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 82 NWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSS 141
N + G SG V++WR+ E VP + + H S ++SI +AV ++
Sbjct: 195 NTADAIVTGSMSGTVAVWRVP-----GTETKSVPV--LQAAELEHHTSPVSSIDVAVAAT 247
Query: 142 DSSNPQVLLVTGSSDGSVRIWD-GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLI 200
++S + +V+ DGS+ +WD + E P ++ + PIS ++I
Sbjct: 248 NASAERATIVSAGWDGSIALWDVPADARFETQEETGGAPGKKRRKQHGSDARPISS-AII 306
Query: 201 LPVQSPRLMLL 211
P P LM+L
Sbjct: 307 TP---PPLMVL 314
>sp|P36130|CAF4_YEAST CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CAF4 PE=1 SV=3
Length = 643
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 23/81 (28%)
Query: 83 WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSD 142
+ S LA G + G V LW + V K + L + H ITS+ D
Sbjct: 498 YNSALATGTKDGIVRLWDLRVGKP--------------VRLLEGHTDGITSLKF-----D 538
Query: 143 SSNPQVLLVTGSSDGSVRIWD 163
S LVTGS D SVRIWD
Sbjct: 539 SEK----LVTGSMDNSVRIWD 555
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 58/179 (32%)
Query: 87 LAVGGRSGKVSLWRICVPKCY---------SVEDCKVP------------TTAVLIGLFQ 125
L G R K+ W + KC + D K+P T A +IG Q
Sbjct: 437 LVSGSRDKKIFHWDLTTGKCIQQLDLIFTPTHSDIKMPARSLNNGACLLGTEAPMIGALQ 496
Query: 126 AHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLK- 184
+NS L TG+ DG VR+WD + + + E H + LK
Sbjct: 497 CYNS-------------------ALATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSLKF 537
Query: 185 ---EVVT---VNTVPI------SVLSLI---LPVQSPRL--MLLAVGKGSGSFDLWKCD 226
++VT N+V I S+L +I LPV S L+ VG G +++ +
Sbjct: 538 DSEKLVTGSMDNSVRIWDLRTSSILDVIAYDLPVSSLDFDGKLITVGANEGGVNVFNME 596
>sp|Q01369|GBLP_NEUCR Guanine nucleotide-binding protein subunit beta-like protein
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=cpc-2 PE=3 SV=1
Length = 316
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 37/169 (21%)
Query: 105 KCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD- 163
K + + CK+ T + H +I ++++ S D S L +G DG+ +WD
Sbjct: 175 KVWELSSCKLQTDHI------GHTGYINAVTI---SPDGS----LCASGGKDGTTMLWDL 221
Query: 164 ---GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSF 220
++ L + E H + FS + + T S +++ + K S
Sbjct: 222 NESKHLYSLNANDEIHALVFSPNRYWLCAAT-------------SSSIIIFDLEKKS--- 265
Query: 221 DLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSW 269
K D +F +G + + V+ LAW+ DG L++ DN +R+W
Sbjct: 266 ---KVDELKPEFQNIGKKSREPECVS-LAWSADGQTLFAGYTDNIIRAW 310
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 119 VLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD 163
+L G + HN W+TS++ ++ NP +LL +GS D S+ IW+
Sbjct: 6 ILKGTLEGHNGWVTSLATSL-----ENPNMLL-SGSRDKSLIIWN 44
>sp|B9WD30|LIS1_CANDC Nuclear distribution protein PAC1 OS=Candida dubliniensis (strain
CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=PAC1 PE=3 SV=1
Length = 489
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208
L++ G +DG++ IW+ S + + +P ++K +T I+ + + P
Sbjct: 135 LVLNGCNDGNLYIWNI-------SNDDNTIPEKMIK----AHTRAIN--KICFTYKKP-- 179
Query: 209 MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWA-FDGCCLYSCSQDNFVR 267
LA + +W KF+ + + N H+ V+ + ++ D LYS S+D +R
Sbjct: 180 YYLATCSSDLTIKIWD-----EKFNHIRTLNGHEHTVSSIQFSPIDNSILYSVSRDKNIR 234
Query: 268 SW-IFHGNSL 276
W IF G SL
Sbjct: 235 VWDIFQGISL 244
>sp|Q91WG4|ELP2_MOUSE Elongator complex protein 2 OS=Mus musculus GN=Elp2 PE=1 SV=1
Length = 831
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 32/190 (16%)
Query: 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP 146
L GG +V W + E+ +V + L Q H + ++ S S
Sbjct: 78 LVSGGSDNRVIHWEL--------ENNQVLKSVRL----QGHEGPVCAVHAIYQSGPSEGE 125
Query: 147 Q-VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205
Q L+ + +SD +VRIW E++ L+ + + +SV ILP
Sbjct: 126 QHALIASAASDSTVRIWSKKGSEVK-----------YLQTLSFRDGFVLSVCLAILP--G 172
Query: 206 PRLMLLAVGKGSGSFDLW-KCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLY--SCSQ 262
+ +LA G L+ + D ++F K S H+ + G+ WA G L+ SCSQ
Sbjct: 173 TNVPVLACGDDDCRIHLYIQQD---DQFQKALSLCGHEDWIRGVEWATFGRDLFLASCSQ 229
Query: 263 DNFVRSWIFH 272
D +R W +
Sbjct: 230 DCLIRIWRLY 239
>sp|C4YPI7|LIS1_CANAW Nuclear distribution protein PAC1 OS=Candida albicans (strain WO-1)
GN=PAC1 PE=3 SV=1
Length = 486
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208
L++ G +DG++ IW+ S + + +P ++K +T I+ + + P
Sbjct: 135 LVLNGCNDGNLYIWN-------ISNDDNTIPEKMIK----AHTRAIN--KICFTYKKP-- 179
Query: 209 MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWA-FDGCCLYSCSQDNFVR 267
LA + +W KF+ + + N H+ V+ + ++ D LYS S+D +R
Sbjct: 180 YYLATCSSDLTIKIWD-----EKFNHIRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIR 234
Query: 268 SW-IFHGNSL 276
W IF G SL
Sbjct: 235 VWDIFQGISL 244
>sp|Q5A7Q6|LIS1_CANAL Nuclear distribution protein PAC1 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=PAC1 PE=3 SV=1
Length = 486
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208
L++ G +DG++ IW+ S + + +P ++K +T I+ + + P
Sbjct: 135 LVLNGCNDGNLYIWN-------ISNDDNTIPEKMIK----AHTRAIN--KICFTYKKP-- 179
Query: 209 MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWA-FDGCCLYSCSQDNFVR 267
LA + +W KF+ + + N H+ V+ + ++ D LYS S+D +R
Sbjct: 180 YYLATCSSDLTIKIWD-----EKFNHIRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIR 234
Query: 268 SW-IFHGNSL 276
W IF G SL
Sbjct: 235 VWDIFQGISL 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,441,150
Number of Sequences: 539616
Number of extensions: 4492775
Number of successful extensions: 15596
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 14439
Number of HSP's gapped (non-prelim): 1449
length of query: 318
length of database: 191,569,459
effective HSP length: 117
effective length of query: 201
effective length of database: 128,434,387
effective search space: 25815311787
effective search space used: 25815311787
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)