Query 021036
Match_columns 318
No_of_seqs 360 out of 1894
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 11:48:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 5E-37 1.7E-41 260.9 27.6 222 18-316 94-318 (344)
2 3ow8_A WD repeat-containing pr 100.0 1.9E-36 6.5E-41 255.2 27.4 239 16-317 47-309 (321)
3 1vyh_C Platelet-activating fac 100.0 2.9E-36 9.9E-41 262.6 28.5 236 17-317 120-399 (410)
4 2pbi_B Guanine nucleotide-bind 100.0 1.8E-35 6.1E-40 252.7 28.4 239 16-317 75-345 (354)
5 2ynn_A Coatomer subunit beta'; 100.0 2.5E-35 8.5E-40 246.6 28.3 248 16-317 24-291 (304)
6 1got_B GT-beta; complex (GTP-b 100.0 1.5E-35 5.1E-40 251.8 26.8 236 16-317 66-331 (340)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-34 3.9E-39 246.8 29.4 198 16-272 27-224 (345)
8 4g56_B MGC81050 protein; prote 100.0 6.9E-35 2.4E-39 249.3 25.5 242 16-317 53-331 (357)
9 3frx_A Guanine nucleotide-bind 100.0 3.2E-34 1.1E-38 241.5 28.2 231 12-317 25-256 (319)
10 3iz6_a 40S ribosomal protein R 100.0 4.7E-34 1.6E-38 246.3 29.0 242 16-317 77-363 (380)
11 2pm7_B Protein transport prote 100.0 1.2E-32 4.2E-37 229.5 30.4 233 15-317 19-273 (297)
12 2xzm_R RACK1; ribosome, transl 100.0 9.8E-33 3.3E-37 234.8 29.5 226 16-317 38-274 (343)
13 1nr0_A Actin interacting prote 100.0 7.4E-33 2.5E-37 252.9 29.9 271 13-317 156-555 (611)
14 1nr0_A Actin interacting prote 100.0 1.4E-32 4.8E-37 251.1 31.4 247 16-315 70-384 (611)
15 3ow8_A WD repeat-containing pr 100.0 4.6E-33 1.6E-37 234.6 24.7 203 18-271 93-319 (321)
16 2hes_X YDR267CP; beta-propelle 100.0 3.7E-32 1.3E-36 229.9 28.4 235 19-316 26-267 (330)
17 4ery_A WD repeat-containing pr 100.0 2.9E-32 9.9E-37 228.7 27.2 237 16-316 34-297 (312)
18 4gqb_B Methylosome protein 50; 100.0 1.3E-32 4.5E-37 233.7 25.2 180 86-317 95-277 (344)
19 2ynn_A Coatomer subunit beta'; 100.0 5.3E-32 1.8E-36 226.4 23.5 207 68-317 9-247 (304)
20 3frx_A Guanine nucleotide-bind 100.0 3.7E-31 1.3E-35 222.8 28.8 230 16-317 76-305 (319)
21 3bg1_A Protein SEC13 homolog; 100.0 1.3E-32 4.5E-37 231.3 19.6 235 16-317 24-281 (316)
22 2ymu_A WD-40 repeat protein; u 100.0 1.2E-31 4.1E-36 243.2 27.0 232 16-317 314-568 (577)
23 3dm0_A Maltose-binding peripla 100.0 1.8E-31 6.3E-36 247.3 28.5 231 11-317 389-621 (694)
24 3dwl_C Actin-related protein 2 100.0 3.9E-32 1.3E-36 233.7 20.6 230 16-317 22-270 (377)
25 1got_B GT-beta; complex (GTP-b 100.0 3.3E-31 1.1E-35 225.0 25.8 213 16-270 108-340 (340)
26 1erj_A Transcriptional repress 100.0 6.5E-31 2.2E-35 227.6 27.1 244 19-317 78-329 (393)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-31 1.4E-35 224.9 25.3 200 68-317 11-213 (345)
28 4e54_B DNA damage-binding prot 100.0 2E-31 6.9E-36 233.8 23.2 205 8-275 123-329 (435)
29 2pm7_B Protein transport prote 100.0 5.2E-31 1.8E-35 219.6 24.5 200 68-317 5-226 (297)
30 2j04_B YDR362CP, TAU91; beta p 100.0 8.7E-32 3E-36 240.0 20.9 245 17-317 225-505 (524)
31 1gxr_A ESG1, transducin-like e 100.0 5.2E-30 1.8E-34 216.5 30.4 236 17-317 63-325 (337)
32 1erj_A Transcriptional repress 100.0 1.5E-30 5.1E-35 225.4 27.3 229 16-317 134-377 (393)
33 4ery_A WD repeat-containing pr 100.0 1.7E-30 5.9E-35 217.9 26.8 194 67-317 18-211 (312)
34 1vyh_C Platelet-activating fac 100.0 3.7E-31 1.3E-35 230.3 23.1 184 68-309 104-287 (410)
35 4g56_B MGC81050 protein; prote 100.0 3.5E-31 1.2E-35 226.3 22.2 210 18-273 106-343 (357)
36 3jrp_A Fusion protein of prote 100.0 4.5E-30 1.5E-34 220.4 28.7 235 16-317 22-275 (379)
37 4aow_A Guanine nucleotide-bind 100.0 1.2E-29 4.2E-34 214.7 30.2 255 10-317 44-325 (340)
38 2hes_X YDR267CP; beta-propelle 100.0 3.4E-30 1.1E-34 217.9 25.7 205 68-317 10-218 (330)
39 2j04_B YDR362CP, TAU91; beta p 100.0 2.7E-31 9.4E-36 236.8 18.9 236 19-317 175-416 (524)
40 3f3f_A Nucleoporin SEH1; struc 100.0 6.6E-30 2.3E-34 216.4 26.1 263 16-317 22-325 (351)
41 2ymu_A WD-40 repeat protein; u 100.0 9.4E-30 3.2E-34 230.8 28.3 232 16-317 273-527 (577)
42 3iz6_a 40S ribosomal protein R 100.0 2.9E-30 1E-34 222.5 23.7 204 15-274 168-376 (380)
43 1k8k_C P40, ARP2/3 complex 41 100.0 8.4E-30 2.9E-34 218.4 26.1 226 16-316 19-262 (372)
44 2pm9_A Protein WEB1, protein t 100.0 1.7E-30 5.8E-35 226.1 21.9 264 7-317 15-325 (416)
45 4h5i_A Guanine nucleotide-exch 100.0 3.5E-30 1.2E-34 220.7 23.4 190 75-317 136-331 (365)
46 1r5m_A SIR4-interacting protei 100.0 7.4E-30 2.5E-34 222.2 25.8 273 11-317 52-413 (425)
47 4gq1_A NUP37; propeller, trans 100.0 1.1E-30 3.7E-35 226.2 20.1 245 17-317 101-378 (393)
48 2xzm_R RACK1; ribosome, transl 100.0 8.4E-30 2.9E-34 216.6 25.1 201 67-317 16-232 (343)
49 3dw8_B Serine/threonine-protei 100.0 9.4E-30 3.2E-34 223.6 25.7 216 69-317 174-435 (447)
50 3vl1_A 26S proteasome regulato 100.0 7.5E-30 2.6E-34 222.5 24.8 218 17-317 68-310 (420)
51 3ei3_B DNA damage-binding prot 100.0 2.9E-29 1E-33 216.3 28.1 203 11-275 80-284 (383)
52 2pbi_B Guanine nucleotide-bind 100.0 1E-29 3.5E-34 217.0 24.6 189 17-270 166-354 (354)
53 3bg1_A Protein SEC13 homolog; 100.0 2E-30 6.8E-35 218.0 18.5 198 69-317 10-235 (316)
54 3vl1_A 26S proteasome regulato 100.0 1.2E-29 4E-34 221.2 23.7 233 15-317 107-353 (420)
55 3k26_A Polycomb protein EED; W 100.0 1.4E-29 4.7E-34 216.3 22.7 239 17-317 85-354 (366)
56 1sq9_A Antiviral protein SKI8; 100.0 1.7E-29 6E-34 218.5 23.5 256 18-317 27-383 (397)
57 3mmy_A MRNA export factor; mRN 100.0 3.2E-29 1.1E-33 214.1 24.3 242 17-317 54-334 (368)
58 4a11_B DNA excision repair pro 100.0 2E-28 6.9E-33 212.2 29.5 256 12-317 51-353 (408)
59 3i2n_A WD repeat-containing pr 100.0 2E-29 7E-34 214.7 22.5 264 10-317 24-341 (357)
60 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-29 1.2E-33 217.3 24.3 223 21-315 51-284 (402)
61 2aq5_A Coronin-1A; WD40 repeat 100.0 3.9E-29 1.3E-33 217.1 23.5 231 12-315 89-330 (402)
62 3k26_A Polycomb protein EED; W 100.0 9E-30 3.1E-34 217.5 19.2 244 16-317 33-306 (366)
63 4gga_A P55CDC, cell division c 100.0 1.3E-28 4.3E-33 215.1 26.8 233 20-317 118-383 (420)
64 2pm9_A Protein WEB1, protein t 100.0 5.9E-29 2E-33 216.4 24.3 246 12-317 121-402 (416)
65 3lrv_A PRE-mRNA-splicing facto 100.0 1E-28 3.4E-33 210.0 24.8 224 16-316 47-278 (343)
66 4aez_A CDC20, WD repeat-contai 100.0 3.7E-28 1.3E-32 210.9 28.4 214 18-316 104-321 (401)
67 3jro_A Fusion protein of prote 100.0 1.1E-28 3.8E-33 230.3 26.4 234 16-317 20-273 (753)
68 4ggc_A P55CDC, cell division c 100.0 1.8E-28 6.3E-33 205.5 25.2 234 20-317 38-303 (318)
69 4e54_B DNA damage-binding prot 100.0 1.6E-29 5.3E-34 221.8 18.8 196 70-317 117-315 (435)
70 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-28 5.7E-33 205.2 24.1 229 16-316 28-284 (313)
71 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-28 9.1E-33 229.8 27.2 238 16-316 24-290 (814)
72 2xyi_A Probable histone-bindin 100.0 4.2E-28 1.4E-32 212.4 26.6 254 12-317 136-398 (430)
73 3v7d_B Cell division control p 100.0 6.4E-28 2.2E-32 213.2 27.3 245 17-317 132-410 (464)
74 3jrp_A Fusion protein of prote 100.0 1.6E-28 5.6E-33 210.7 22.9 200 68-317 7-228 (379)
75 4aow_A Guanine nucleotide-bind 100.0 9.6E-28 3.3E-32 203.1 27.1 209 68-316 34-274 (340)
76 3dm0_A Maltose-binding peripla 100.0 4.3E-28 1.5E-32 224.7 27.0 234 16-317 441-681 (694)
77 2j04_A TAU60, YPL007P, hypothe 100.0 4.8E-28 1.6E-32 212.3 25.2 231 15-317 25-286 (588)
78 3zwl_B Eukaryotic translation 100.0 1.7E-27 5.7E-32 203.5 28.2 228 16-317 43-278 (369)
79 1gxr_A ESG1, transducin-like e 100.0 1.6E-27 5.6E-32 201.2 27.6 190 70-317 95-284 (337)
80 4aez_A CDC20, WD repeat-contai 100.0 1.3E-27 4.6E-32 207.3 27.7 219 16-317 145-368 (401)
81 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-27 6E-32 203.9 27.6 238 16-317 63-349 (372)
82 3dwl_C Actin-related protein 2 100.0 7.4E-29 2.5E-33 213.2 19.0 205 72-317 11-224 (377)
83 3gre_A Serine/threonine-protei 100.0 8.1E-28 2.8E-32 210.9 24.8 249 16-317 122-428 (437)
84 4h5i_A Guanine nucleotide-exch 100.0 7E-28 2.4E-32 206.5 22.5 189 21-274 151-344 (365)
85 3gre_A Serine/threonine-protei 100.0 8.7E-28 3E-32 210.7 23.0 246 16-317 75-347 (437)
86 3ei3_B DNA damage-binding prot 100.0 4.5E-27 1.5E-31 202.6 25.1 195 67-317 68-270 (383)
87 2w18_A PALB2, fancn, partner a 100.0 2.5E-27 8.7E-32 195.7 22.3 240 18-317 54-345 (356)
88 1yfq_A Cell cycle arrest prote 100.0 2.5E-27 8.7E-32 200.7 22.8 234 17-317 23-311 (342)
89 3sfz_A APAF-1, apoptotic pepti 100.0 6E-27 2.1E-31 230.0 28.5 221 16-317 626-901 (1249)
90 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-26 3.6E-31 204.4 27.0 154 119-317 270-426 (445)
91 4gga_A P55CDC, cell division c 100.0 3.8E-27 1.3E-31 205.7 24.0 211 16-274 158-396 (420)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.4E-27 3.2E-31 205.0 25.8 209 68-317 98-326 (450)
93 3zwl_B Eukaryotic translation 100.0 1.7E-26 6E-31 197.2 26.4 228 16-317 85-334 (369)
94 1sq9_A Antiviral protein SKI8; 100.0 6.4E-27 2.2E-31 202.4 22.7 207 16-274 136-396 (397)
95 2oaj_A Protein SNI1; WD40 repe 100.0 8E-27 2.7E-31 221.1 24.7 226 19-271 366-659 (902)
96 3v7d_B Cell division control p 100.0 4E-26 1.4E-30 201.6 26.8 227 19-316 175-450 (464)
97 1pgu_A Actin interacting prote 100.0 3.7E-26 1.3E-30 208.4 27.2 239 12-317 168-602 (615)
98 3jro_A Fusion protein of prote 100.0 7.1E-27 2.4E-31 218.1 22.8 200 68-317 5-226 (753)
99 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-26 1.2E-30 224.6 28.0 204 16-272 668-912 (1249)
100 2oaj_A Protein SNI1; WD40 repe 100.0 3.5E-26 1.2E-30 216.7 26.7 237 16-316 28-294 (902)
101 3f3f_A Nucleoporin SEH1; struc 100.0 3.3E-26 1.1E-30 193.6 23.9 207 68-317 7-237 (351)
102 1p22_A F-BOX/WD-repeat protein 100.0 3E-26 1E-30 201.0 24.1 246 16-317 142-402 (435)
103 4ggc_A P55CDC, cell division c 100.0 2.2E-26 7.6E-31 192.8 22.1 217 16-273 78-315 (318)
104 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-26 2.7E-30 198.2 26.6 185 68-317 169-353 (435)
105 1r5m_A SIR4-interacting protei 99.9 9.3E-26 3.2E-30 196.3 25.2 201 71-317 107-349 (425)
106 3dw8_B Serine/threonine-protei 99.9 2.2E-26 7.5E-31 202.1 21.3 222 74-317 30-304 (447)
107 3i2n_A WD repeat-containing pr 99.9 8.2E-26 2.8E-30 192.3 23.5 208 15-275 127-355 (357)
108 4a11_B DNA excision repair pro 99.9 1.2E-25 4E-30 194.8 24.8 218 71-317 42-264 (408)
109 1pgu_A Actin interacting prote 99.9 1.4E-25 4.9E-30 204.5 26.5 224 19-317 32-271 (615)
110 3lrv_A PRE-mRNA-splicing facto 99.9 6E-26 2.1E-30 192.8 22.2 198 20-274 88-293 (343)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-25 3.8E-30 198.2 24.4 230 10-315 108-371 (450)
112 3mkq_A Coatomer beta'-subunit; 99.9 8.1E-26 2.8E-30 212.9 21.8 194 68-317 9-205 (814)
113 2xyi_A Probable histone-bindin 99.9 2.1E-25 7.3E-30 195.2 22.9 209 12-275 189-412 (430)
114 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-24 3.8E-29 185.9 26.6 241 18-317 32-324 (355)
115 2ovr_B FBW7, F-BOX/WD repeat p 99.9 6E-25 2.1E-29 193.1 25.5 208 17-317 129-336 (445)
116 2w18_A PALB2, fancn, partner a 99.9 2.8E-25 9.6E-30 183.6 20.9 205 18-271 128-355 (356)
117 2j04_A TAU60, YPL007P, hypothe 99.9 4E-25 1.4E-29 193.9 23.0 230 16-317 96-349 (588)
118 3mmy_A MRNA export factor; mRN 99.9 9.1E-25 3.1E-29 186.4 21.9 204 68-317 35-292 (368)
119 3odt_A Protein DOA1; ubiquitin 99.9 2E-24 6.9E-29 180.4 23.4 212 16-277 70-300 (313)
120 4gq1_A NUP37; propeller, trans 99.9 5.3E-25 1.8E-29 190.4 19.7 226 18-276 31-289 (393)
121 1l0q_A Surface layer protein; 99.9 1.6E-23 5.4E-28 180.8 27.6 212 18-317 3-218 (391)
122 1yfq_A Cell cycle arrest prote 99.9 1.5E-24 5E-29 183.7 18.8 193 70-317 9-213 (342)
123 3bws_A Protein LP49; two-domai 99.9 5.5E-23 1.9E-27 179.8 26.5 220 16-317 133-363 (433)
124 3vu4_A KMHSV2; beta-propeller 99.9 1.1E-23 3.9E-28 179.6 20.3 222 16-273 70-336 (355)
125 1l0q_A Surface layer protein; 99.9 2.5E-22 8.4E-27 173.3 27.6 215 12-314 39-259 (391)
126 3bws_A Protein LP49; two-domai 99.9 1E-21 3.5E-26 171.7 27.2 214 16-316 180-418 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-21 8.4E-26 168.6 26.2 212 19-317 145-372 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-21 8.5E-26 168.5 22.9 231 16-317 74-329 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.5E-26 170.5 19.8 195 85-315 49-257 (434)
130 3u4y_A Uncharacterized protein 99.9 6.3E-19 2.2E-23 148.4 26.7 220 16-316 9-238 (331)
131 2oit_A Nucleoporin 214KDA; NH2 99.9 9.4E-20 3.2E-24 159.3 22.2 168 73-274 93-279 (434)
132 2ojh_A Uncharacterized protein 99.8 2.2E-19 7.6E-24 148.2 21.8 210 21-317 16-235 (297)
133 1ri6_A Putative isomerase YBHE 99.8 1.1E-18 3.9E-23 147.2 24.8 227 20-316 8-248 (343)
134 2ojh_A Uncharacterized protein 99.8 2.7E-19 9.2E-24 147.7 20.0 219 19-317 55-290 (297)
135 1ri6_A Putative isomerase YBHE 99.8 4.1E-18 1.4E-22 143.9 25.5 228 18-317 50-295 (343)
136 3vgz_A Uncharacterized protein 99.8 6.3E-18 2.2E-22 143.4 25.8 225 17-316 101-331 (353)
137 3hfq_A Uncharacterized protein 99.8 1.3E-17 4.6E-22 141.4 26.9 229 20-317 53-304 (347)
138 1xfd_A DIP, dipeptidyl aminope 99.8 4.1E-19 1.4E-23 165.2 17.5 227 20-315 30-322 (723)
139 1pby_B Quinohemoprotein amine 99.8 7E-18 2.4E-22 142.0 23.1 213 19-316 3-297 (337)
140 1nir_A Nitrite reductase; hemo 99.8 1.7E-17 5.7E-22 148.9 25.1 204 17-279 149-361 (543)
141 3vgz_A Uncharacterized protein 99.8 4.9E-17 1.7E-21 137.9 25.2 205 26-316 68-289 (353)
142 2ecf_A Dipeptidyl peptidase IV 99.8 4.4E-18 1.5E-22 158.7 19.8 255 16-316 47-354 (741)
143 2z3z_A Dipeptidyl aminopeptida 99.8 2.8E-17 9.4E-22 152.5 25.0 173 92-316 233-418 (706)
144 1k32_A Tricorn protease; prote 99.8 1.9E-17 6.4E-22 160.0 23.7 181 73-316 296-489 (1045)
145 1jmx_B Amine dehydrogenase; ox 99.8 7.2E-17 2.5E-21 136.6 22.9 216 15-316 9-312 (349)
146 3hfq_A Uncharacterized protein 99.8 1.6E-16 5.4E-21 134.8 24.4 229 24-315 13-256 (347)
147 1nir_A Nitrite reductase; hemo 99.8 1.1E-16 3.7E-21 143.7 22.7 179 79-316 144-341 (543)
148 3u4y_A Uncharacterized protein 99.8 4.9E-16 1.7E-20 130.7 24.6 229 18-316 53-290 (331)
149 2z3z_A Dipeptidyl aminopeptida 99.7 4.9E-17 1.7E-21 150.8 18.9 244 18-316 36-329 (706)
150 2ecf_A Dipeptidyl peptidase IV 99.7 6.2E-17 2.1E-21 151.0 19.6 180 78-316 42-303 (741)
151 1xfd_A DIP, dipeptidyl aminope 99.7 2.4E-17 8.1E-22 153.4 16.7 187 77-316 21-272 (723)
152 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.2E-15 4E-20 130.5 24.9 178 92-317 117-328 (365)
153 3scy_A Hypothetical bacterial 99.7 2.7E-15 9.1E-20 127.9 26.9 174 76-278 158-344 (361)
154 3scy_A Hypothetical bacterial 99.7 4.1E-15 1.4E-19 126.7 26.8 199 85-317 110-324 (361)
155 1z68_A Fibroblast activation p 99.7 4.3E-17 1.5E-21 151.6 13.2 230 19-315 28-328 (719)
156 1k32_A Tricorn protease; prote 99.7 3.2E-15 1.1E-19 144.5 25.9 198 71-315 335-573 (1045)
157 1pby_B Quinohemoprotein amine 99.7 4.8E-15 1.6E-19 124.6 23.8 205 16-277 45-314 (337)
158 1z68_A Fibroblast activation p 99.7 2.4E-16 8.2E-21 146.6 13.9 177 84-315 27-269 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.2E-14 1.4E-18 120.8 24.9 187 85-316 52-272 (365)
160 3o4h_A Acylamino-acid-releasin 99.7 2.7E-15 9.3E-20 136.1 17.9 176 75-316 24-212 (582)
161 4a5s_A Dipeptidyl peptidase 4 99.7 4.1E-15 1.4E-19 138.7 19.1 192 26-275 35-296 (740)
162 3o4h_A Acylamino-acid-releasin 99.6 1.5E-14 5.2E-19 131.2 21.0 162 86-316 124-299 (582)
163 1jmx_B Amine dehydrogenase; ox 99.6 5.2E-14 1.8E-18 118.9 20.0 162 77-278 4-180 (349)
164 3fvz_A Peptidyl-glycine alpha- 99.6 4E-13 1.4E-17 113.0 24.0 199 73-316 91-309 (329)
165 3pe7_A Oligogalacturonate lyas 99.6 9.7E-14 3.3E-18 119.2 20.4 160 126-316 185-368 (388)
166 1q7f_A NHL, brain tumor CG1071 99.6 9.6E-13 3.3E-17 108.3 25.5 221 18-316 42-268 (286)
167 3pe7_A Oligogalacturonate lyas 99.6 1.1E-13 3.7E-18 118.9 20.0 180 78-315 41-254 (388)
168 2oiz_A Aromatic amine dehydrog 99.6 4.6E-13 1.6E-17 114.1 22.7 227 10-311 8-360 (361)
169 4a5s_A Dipeptidyl peptidase 4 99.6 6.3E-14 2.2E-18 130.7 18.6 140 85-271 29-200 (740)
170 3c5m_A Oligogalacturonate lyas 99.6 1.2E-13 4.2E-18 118.7 16.3 169 85-316 93-300 (396)
171 3azo_A Aminopeptidase; POP fam 99.6 6.1E-13 2.1E-17 122.5 21.7 152 85-279 142-331 (662)
172 1q7f_A NHL, brain tumor CG1071 99.5 6.2E-12 2.1E-16 103.4 24.1 191 68-316 25-224 (286)
173 3azo_A Aminopeptidase; POP fam 99.5 9.8E-13 3.3E-17 121.1 20.9 157 127-317 128-312 (662)
174 1xip_A Nucleoporin NUP159; bet 99.5 3.6E-13 1.2E-17 114.5 16.1 188 75-315 40-230 (388)
175 2dg1_A DRP35, lactonase; beta 99.5 2E-11 6.8E-16 102.6 26.3 223 19-315 58-296 (333)
176 3c5m_A Oligogalacturonate lyas 99.5 1.2E-12 4.2E-17 112.5 16.6 237 16-316 91-368 (396)
177 3e5z_A Putative gluconolactona 99.5 2.8E-11 9.5E-16 100.1 23.7 213 19-316 42-274 (296)
178 3e5z_A Putative gluconolactona 99.5 1.3E-11 4.5E-16 102.0 21.4 183 59-315 32-234 (296)
179 3no2_A Uncharacterized protein 99.5 3.5E-11 1.2E-15 98.5 23.6 193 16-276 4-198 (276)
180 3fvz_A Peptidyl-glycine alpha- 99.4 4.9E-11 1.7E-15 100.2 23.7 189 72-308 23-250 (329)
181 2xdw_A Prolyl endopeptidase; a 99.4 4.3E-11 1.5E-15 111.1 24.3 207 28-314 152-395 (710)
182 3dsm_A Uncharacterized protein 99.4 5.5E-11 1.9E-15 99.9 22.7 213 17-315 54-284 (328)
183 1rwi_B Serine/threonine-protei 99.4 1E-10 3.5E-15 95.1 23.3 179 78-316 72-251 (270)
184 3no2_A Uncharacterized protein 99.4 3.6E-11 1.2E-15 98.3 20.0 150 84-280 5-162 (276)
185 2gop_A Trilobed protease; beta 99.4 9.2E-11 3.1E-15 99.0 21.9 190 26-316 42-279 (347)
186 2dg1_A DRP35, lactonase; beta 99.4 2.3E-11 7.7E-16 102.3 18.1 181 75-315 8-198 (333)
187 3dsm_A Uncharacterized protein 99.4 1.7E-10 5.9E-15 96.8 23.1 218 24-316 14-242 (328)
188 2bkl_A Prolyl endopeptidase; m 99.4 1.2E-10 4.1E-15 107.8 22.6 212 23-314 143-378 (695)
189 3g4e_A Regucalcin; six bladed 99.3 1.3E-09 4.6E-14 90.0 25.8 218 16-315 24-258 (297)
190 1qks_A Cytochrome CD1 nitrite 99.3 1.2E-09 4.1E-14 98.1 26.2 202 18-279 168-379 (567)
191 2gop_A Trilobed protease; beta 99.3 2.2E-10 7.6E-15 96.7 20.3 150 94-316 152-317 (347)
192 1xip_A Nucleoporin NUP159; bet 99.3 9.9E-10 3.4E-14 93.4 23.7 126 83-259 96-230 (388)
193 2xdw_A Prolyl endopeptidase; a 99.3 2.5E-10 8.5E-15 106.0 21.7 188 75-316 127-353 (710)
194 2z2n_A Virginiamycin B lyase; 99.3 7.5E-09 2.6E-13 85.1 27.3 181 77-315 61-241 (299)
195 2bkl_A Prolyl endopeptidase; m 99.3 1.8E-10 6.1E-15 106.7 18.6 187 74-316 122-336 (695)
196 3hrp_A Uncharacterized protein 99.3 6E-09 2E-13 90.1 26.5 195 84-315 182-396 (409)
197 1rwi_B Serine/threonine-protei 99.3 6.4E-10 2.2E-14 90.3 18.5 180 78-316 29-209 (270)
198 2z2n_A Virginiamycin B lyase; 99.2 7.9E-09 2.7E-13 84.9 24.8 185 74-316 16-200 (299)
199 2ghs_A AGR_C_1268P; regucalcin 99.2 1E-08 3.5E-13 85.9 25.2 173 85-315 102-288 (326)
200 1qks_A Cytochrome CD1 nitrite 99.2 7E-09 2.4E-13 93.1 24.0 177 82-316 165-359 (567)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.8E-08 6.1E-13 83.6 25.0 219 23-315 42-284 (314)
202 2qc5_A Streptogramin B lactona 99.2 6.5E-08 2.2E-12 79.4 27.2 182 77-316 66-247 (300)
203 2oiz_A Aromatic amine dehydrog 99.2 2.5E-09 8.5E-14 91.0 19.0 97 92-224 29-137 (361)
204 1yr2_A Prolyl oligopeptidase; 99.1 2.6E-08 8.8E-13 92.9 25.1 164 95-314 244-422 (741)
205 2mad_H Methylamine dehydrogena 99.1 1.7E-07 5.7E-12 80.0 28.0 233 12-316 27-336 (373)
206 2qc5_A Streptogramin B lactona 99.1 1.6E-07 5.6E-12 77.0 26.2 184 75-316 106-289 (300)
207 2qe8_A Uncharacterized protein 99.1 9.4E-09 3.2E-13 86.8 18.0 207 70-316 64-308 (343)
208 2ece_A 462AA long hypothetical 99.1 3.6E-08 1.2E-12 84.4 21.2 241 17-317 96-399 (462)
209 3c75_H MADH, methylamine dehyd 99.1 1.9E-08 6.6E-13 86.6 19.8 239 9-317 76-389 (426)
210 3g4e_A Regucalcin; six bladed 99.1 1.2E-07 4.2E-12 78.1 23.7 187 59-315 17-215 (297)
211 3iuj_A Prolyl endopeptidase; h 99.0 4.3E-08 1.5E-12 90.7 21.9 189 24-280 152-366 (693)
212 3dr2_A Exported gluconolactona 99.0 1E-07 3.5E-12 78.9 22.3 176 80-315 93-293 (305)
213 2hz6_A Endoplasmic reticulum t 99.0 1.3E-10 4.5E-15 99.2 4.5 185 16-277 8-196 (369)
214 3hrp_A Uncharacterized protein 99.0 9.8E-08 3.4E-12 82.5 21.0 202 72-315 130-339 (409)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 1.4E-07 4.7E-12 78.2 21.2 156 75-273 119-299 (314)
216 1yr2_A Prolyl oligopeptidase; 99.0 8.8E-08 3E-12 89.3 22.0 151 81-274 171-351 (741)
217 3dr2_A Exported gluconolactona 99.0 1.8E-07 6.2E-12 77.4 20.8 156 59-275 49-226 (305)
218 2ghs_A AGR_C_1268P; regucalcin 98.9 9.8E-07 3.4E-11 73.8 24.3 144 84-272 61-209 (326)
219 3sjl_D Methylamine dehydrogena 98.9 5.2E-07 1.8E-11 76.5 20.5 218 25-316 107-349 (386)
220 3iuj_A Prolyl endopeptidase; h 98.8 1.7E-07 5.8E-12 86.7 17.4 197 60-316 116-343 (693)
221 2mad_H Methylamine dehydrogena 98.8 4.1E-06 1.4E-10 71.3 24.4 73 197-279 272-356 (373)
222 2qe8_A Uncharacterized protein 98.7 8.2E-07 2.8E-11 74.8 18.0 163 76-270 20-223 (343)
223 2iwa_A Glutamine cyclotransfer 98.7 2.6E-06 9E-11 68.4 19.8 181 85-315 33-222 (266)
224 2hz6_A Endoplasmic reticulum t 98.7 1.7E-09 5.8E-14 92.3 0.5 144 84-276 9-152 (369)
225 2ece_A 462AA long hypothetical 98.7 9.8E-06 3.3E-10 69.5 22.2 203 77-317 86-339 (462)
226 1mda_H Methylamine dehydrogena 98.6 2.8E-06 9.4E-11 72.0 18.1 74 197-280 269-353 (368)
227 1kb0_A Quinohemoprotein alcoho 98.6 8.9E-06 3.1E-10 74.8 22.5 121 148-278 328-512 (677)
228 3nol_A Glutamine cyclotransfer 98.6 4.7E-06 1.6E-10 66.3 17.7 182 84-316 53-243 (262)
229 3nok_A Glutaminyl cyclase; bet 98.6 7.5E-06 2.6E-10 65.1 18.4 182 84-316 65-253 (268)
230 3mbr_X Glutamine cyclotransfer 98.6 1.3E-05 4.5E-10 63.1 19.6 181 85-316 32-222 (243)
231 1fwx_A Nitrous oxide reductase 98.6 2.7E-06 9.1E-11 75.5 17.1 109 193-317 278-406 (595)
232 1yiq_A Quinohemoprotein alcoho 98.6 1.3E-05 4.4E-10 74.0 22.3 55 218-277 455-509 (689)
233 3sjl_D Methylamine dehydrogena 98.6 2E-05 6.8E-10 66.8 21.6 198 26-280 159-370 (386)
234 3nok_A Glutaminyl cyclase; bet 98.5 3.1E-05 1.1E-09 61.6 19.8 179 16-261 64-254 (268)
235 3c75_H MADH, methylamine dehyd 98.5 4.5E-05 1.5E-09 65.7 22.4 73 197-279 324-408 (426)
236 3qqz_A Putative uncharacterize 98.5 0.00013 4.4E-09 58.2 23.0 194 84-316 39-241 (255)
237 2iwa_A Glutamine cyclotransfer 98.5 8.3E-05 2.8E-09 59.7 21.5 182 26-274 43-238 (266)
238 3nol_A Glutamine cyclotransfer 98.4 4.5E-05 1.5E-09 60.6 18.2 181 17-263 53-245 (262)
239 1npe_A Nidogen, entactin; glyc 98.4 0.00055 1.9E-08 55.0 25.0 169 84-311 91-263 (267)
240 1npe_A Nidogen, entactin; glyc 98.4 0.00054 1.8E-08 55.1 24.3 149 84-276 48-201 (267)
241 3mbr_X Glutamine cyclotransfer 98.4 0.00029 1E-08 55.4 21.4 176 20-261 34-222 (243)
242 3hxj_A Pyrrolo-quinoline quino 98.3 4.4E-05 1.5E-09 63.4 17.9 172 76-315 140-311 (330)
243 1k3i_A Galactose oxidase precu 98.3 0.00036 1.2E-08 64.0 25.3 96 206-317 409-529 (656)
244 2fp8_A Strictosidine synthase; 98.3 0.00017 5.8E-09 59.9 21.0 150 84-273 30-216 (322)
245 1fwx_A Nitrous oxide reductase 98.3 0.00013 4.5E-09 64.8 20.6 216 17-274 15-309 (595)
246 1mda_H Methylamine dehydrogena 98.3 3E-05 1E-09 65.6 15.5 68 85-175 33-114 (368)
247 1yiq_A Quinohemoprotein alcoho 98.2 0.00021 7.3E-09 65.9 21.2 166 84-277 121-342 (689)
248 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00014 4.6E-09 61.8 18.5 135 85-270 240-375 (376)
249 3hxj_A Pyrrolo-quinoline quino 98.2 3.1E-05 1.1E-09 64.3 13.9 98 147-274 107-204 (330)
250 1kb0_A Quinohemoprotein alcoho 98.2 0.00038 1.3E-08 64.0 22.1 163 84-277 128-350 (677)
251 2fp8_A Strictosidine synthase; 98.2 0.00096 3.3E-08 55.3 22.7 116 130-276 127-272 (322)
252 3sov_A LRP-6, low-density lipo 98.1 0.0019 6.5E-08 53.5 23.2 194 18-277 4-201 (318)
253 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00052 1.8E-08 58.2 19.3 146 84-277 188-341 (376)
254 1kv9_A Type II quinohemoprotei 98.1 0.00084 2.9E-08 61.7 21.3 56 217-277 437-492 (668)
255 3v64_C Agrin; beta propeller, 98.0 0.0039 1.3E-07 52.3 23.6 189 19-276 45-237 (349)
256 2p4o_A Hypothetical protein; p 98.0 0.004 1.4E-07 51.1 23.9 193 76-316 75-275 (306)
257 3v65_B Low-density lipoprotein 98.0 0.0035 1.2E-07 53.4 23.0 189 19-276 88-280 (386)
258 4a2l_A BT_4663, two-component 97.9 0.0089 3E-07 56.1 26.4 191 75-315 359-559 (795)
259 3p5b_L Low density lipoprotein 97.9 0.0072 2.5E-07 51.7 25.4 198 17-279 82-283 (400)
260 2xe4_A Oligopeptidase B; hydro 97.9 0.0058 2E-07 56.9 24.7 177 28-271 202-398 (751)
261 2ad6_A Methanol dehydrogenase 97.9 0.0027 9.2E-08 57.2 21.6 56 217-277 443-498 (571)
262 1k3i_A Galactose oxidase precu 97.9 0.00081 2.8E-08 61.7 18.1 118 78-234 191-328 (656)
263 2p4o_A Hypothetical protein; p 97.9 0.0052 1.8E-07 50.4 21.4 144 85-273 44-198 (306)
264 1ijq_A LDL receptor, low-densi 97.9 0.0072 2.5E-07 49.9 25.7 194 20-278 3-200 (316)
265 4hw6_A Hypothetical protein, I 97.9 0.0055 1.9E-07 53.1 22.0 161 130-315 229-419 (433)
266 4a2l_A BT_4663, two-component 97.9 0.013 4.5E-07 54.9 26.0 198 74-315 311-514 (795)
267 2xe4_A Oligopeptidase B; hydro 97.8 0.00069 2.3E-08 63.2 16.5 155 74-273 175-354 (751)
268 3v64_C Agrin; beta propeller, 97.8 0.011 3.6E-07 49.7 22.6 145 128-316 72-220 (349)
269 2p9w_A MAL S 1 allergenic prot 97.7 0.0044 1.5E-07 51.0 17.9 173 59-273 17-215 (334)
270 3v65_B Low-density lipoprotein 97.7 0.015 5.2E-07 49.4 21.4 165 93-316 95-263 (386)
271 3tc9_A Hypothetical hydrolase; 97.7 0.0035 1.2E-07 54.3 17.5 143 130-316 138-287 (430)
272 1kv9_A Type II quinohemoprotei 97.7 0.0021 7.3E-08 59.0 16.9 166 84-277 117-337 (668)
273 3tc9_A Hypothetical hydrolase; 97.7 0.0056 1.9E-07 53.0 18.7 153 75-273 139-301 (430)
274 3m0c_C LDL receptor, low-densi 97.7 0.037 1.3E-06 51.7 24.9 156 84-279 436-595 (791)
275 4a0p_A LRP6, LRP-6, low-densit 97.5 0.047 1.6E-06 49.7 24.4 189 20-276 8-200 (628)
276 1flg_A Protein (quinoprotein e 97.5 0.009 3.1E-07 53.8 18.8 56 217-277 465-520 (582)
277 3v9f_A Two-component system se 97.5 0.019 6.6E-07 53.7 21.4 166 74-279 408-574 (781)
278 3v9f_A Two-component system se 97.5 0.065 2.2E-06 50.1 24.9 191 74-315 314-511 (781)
279 1n7d_A LDL receptor, low-densi 97.5 0.0014 4.9E-08 60.4 13.1 153 85-277 419-575 (699)
280 1w6s_A Methanol dehydrogenase 97.5 0.035 1.2E-06 50.1 21.8 27 148-174 324-350 (599)
281 3qqz_A Putative uncharacterize 97.5 0.027 9.4E-07 44.7 20.3 156 85-270 82-250 (255)
282 1ijq_A LDL receptor, low-densi 97.5 0.034 1.2E-06 45.8 23.1 165 94-316 10-181 (316)
283 4hw6_A Hypothetical protein, I 97.4 0.048 1.6E-06 47.2 21.5 155 73-272 139-303 (433)
284 3p5b_L Low density lipoprotein 97.4 0.045 1.5E-06 46.8 24.1 166 93-316 91-263 (400)
285 3s94_A LRP-6, low-density lipo 97.4 0.051 1.7E-06 49.4 22.2 194 18-277 9-206 (619)
286 2vpj_A Kelch-like protein 12; 97.3 0.055 1.9E-06 44.0 19.9 152 84-279 113-284 (301)
287 3amr_A 3-phytase; beta-propell 97.2 0.076 2.6E-06 44.1 19.7 197 16-272 39-262 (355)
288 2p9w_A MAL S 1 allergenic prot 97.2 0.02 7E-07 47.1 15.1 160 128-316 12-202 (334)
289 2xn4_A Kelch-like protein 2; s 97.1 0.067 2.3E-06 43.5 18.2 153 84-280 62-236 (302)
290 3ii7_A Kelch-like protein 7; p 97.1 0.078 2.7E-06 43.2 18.5 153 84-280 56-232 (306)
291 3amr_A 3-phytase; beta-propell 97.1 0.093 3.2E-06 43.6 22.1 154 85-272 41-209 (355)
292 3sre_A PON1, serum paraoxonase 97.0 0.11 3.8E-06 43.4 19.1 147 144-317 58-239 (355)
293 1w6s_A Methanol dehydrogenase 97.0 0.067 2.3E-06 48.3 17.8 159 87-277 124-346 (599)
294 1n7d_A LDL receptor, low-densi 97.0 0.021 7.2E-07 52.7 14.8 157 77-276 457-617 (699)
295 3sre_A PON1, serum paraoxonase 97.0 0.13 4.5E-06 43.0 21.0 178 92-316 81-284 (355)
296 2vpj_A Kelch-like protein 12; 96.9 0.12 4.2E-06 41.9 18.4 112 146-280 62-191 (301)
297 2ad6_A Methanol dehydrogenase 96.9 0.11 3.9E-06 46.6 18.9 72 84-175 115-194 (571)
298 2xbg_A YCF48-like protein; pho 96.9 0.14 4.7E-06 42.4 19.0 149 126-316 160-310 (327)
299 2xn4_A Kelch-like protein 2; s 96.9 0.062 2.1E-06 43.7 15.9 70 207-280 204-283 (302)
300 1zgk_A Kelch-like ECH-associat 96.9 0.11 3.6E-06 42.5 17.1 70 207-280 168-247 (308)
301 2xzh_A Clathrin heavy chain 1; 96.8 0.16 5.6E-06 41.7 19.1 229 18-277 78-336 (365)
302 2uvk_A YJHT; unknown function, 96.8 0.083 2.8E-06 44.1 16.1 74 207-280 200-301 (357)
303 3kya_A Putative phosphatase; s 96.8 0.12 4E-06 45.3 17.1 117 130-272 140-277 (496)
304 3kya_A Putative phosphatase; s 96.7 0.29 9.8E-06 42.9 22.4 168 132-314 250-460 (496)
305 1flg_A Protein (quinoprotein e 96.6 0.025 8.6E-07 50.9 12.4 80 156-259 465-546 (582)
306 3ii7_A Kelch-like protein 7; p 96.5 0.24 8.4E-06 40.2 19.4 152 85-280 13-185 (306)
307 3sov_A LRP-6, low-density lipo 96.5 0.26 9E-06 40.5 22.9 147 84-275 91-240 (318)
308 2g8s_A Glucose/sorbosone dehyd 96.5 0.21 7.2E-06 41.8 16.5 113 129-261 18-148 (353)
309 3ei3_A DNA damage-binding prot 96.5 0.35 1.2E-05 47.2 19.9 146 84-273 844-999 (1158)
310 1zgk_A Kelch-like ECH-associat 96.4 0.21 7.2E-06 40.7 15.9 112 146-280 168-294 (308)
311 1cru_A Protein (soluble quinop 96.4 0.45 1.5E-05 41.3 20.2 115 129-262 27-163 (454)
312 4a0p_A LRP6, LRP-6, low-densit 96.3 0.59 2E-05 42.5 22.7 168 92-316 13-183 (628)
313 1bpo_A Protein (clathrin); cla 96.3 0.43 1.5E-05 40.8 20.7 229 18-277 77-335 (494)
314 3pbp_A Nucleoporin NUP82; beta 96.3 0.43 1.5E-05 40.7 17.4 145 146-311 31-192 (452)
315 4asc_A Kelch repeat and BTB do 96.3 0.2 6.9E-06 40.9 15.3 111 146-279 148-283 (315)
316 2woz_A Kelch repeat and BTB do 96.2 0.4 1.4E-05 39.2 16.9 70 207-280 158-238 (318)
317 4asc_A Kelch repeat and BTB do 96.2 0.41 1.4E-05 39.1 17.8 70 207-280 148-228 (315)
318 2ism_A Putative oxidoreductase 96.1 0.51 1.7E-05 39.4 17.0 107 129-261 31-153 (352)
319 3m0c_C LDL receptor, low-densi 96.0 1 3.4E-05 42.1 25.3 155 78-275 476-634 (791)
320 3a9g_A Putative uncharacterize 95.8 0.67 2.3E-05 38.7 18.0 108 129-261 29-153 (354)
321 3das_A Putative oxidoreductase 95.7 0.73 2.5E-05 38.4 21.1 119 123-261 26-158 (347)
322 2xbg_A YCF48-like protein; pho 95.5 0.83 2.8E-05 37.6 22.1 144 128-316 79-222 (327)
323 3pbp_A Nucleoporin NUP82; beta 95.5 0.91 3.1E-05 38.7 15.5 124 130-269 67-208 (452)
324 3s94_A LRP-6, low-density lipo 95.5 1.4 4.9E-05 39.9 25.7 150 84-277 361-514 (619)
325 2zwa_A Leucine carboxyl methyl 95.4 1.5 5.1E-05 40.4 18.3 110 146-275 451-579 (695)
326 1cru_A Protein (soluble quinop 95.4 0.89 3.1E-05 39.4 15.9 19 192-215 144-162 (454)
327 2zwa_A Leucine carboxyl methyl 95.2 1.2 4.1E-05 41.0 17.0 118 145-278 499-640 (695)
328 1xi4_A Clathrin heavy chain; a 94.7 1.4 4.9E-05 43.6 16.1 230 16-276 75-334 (1630)
329 1tl2_A L10, protein (tachylect 93.8 1.6 5.4E-05 33.7 11.8 109 131-265 90-202 (236)
330 2woz_A Kelch repeat and BTB do 93.7 2.3 8E-05 34.5 17.2 70 207-280 109-191 (318)
331 2ism_A Putative oxidoreductase 93.7 2.6 9E-05 35.0 21.1 57 244-316 269-332 (352)
332 1tl2_A L10, protein (tachylect 93.7 1.1 3.7E-05 34.6 10.7 112 129-267 41-157 (236)
333 3a9g_A Putative uncharacterize 93.6 1.1 3.9E-05 37.3 12.0 102 193-315 30-151 (354)
334 3s25_A Hypothetical 7-bladed b 93.1 3 0.0001 33.9 13.7 67 206-279 113-182 (302)
335 3das_A Putative oxidoreductase 93.1 3.3 0.00011 34.4 15.6 145 84-259 43-218 (347)
336 3s25_A Hypothetical 7-bladed b 91.5 4.8 0.00016 32.6 14.3 106 144-279 153-261 (302)
337 3ei3_A DNA damage-binding prot 90.8 13 0.00045 36.4 27.8 117 85-232 524-641 (1158)
338 2xzh_A Clathrin heavy chain 1; 90.6 6.3 0.00022 32.5 16.9 108 144-277 75-193 (365)
339 2g8s_A Glucose/sorbosone dehyd 89.8 6.9 0.00024 32.5 12.6 18 85-102 30-47 (353)
340 2be1_A Serine/threonine-protei 89.6 3.1 0.0001 34.5 10.0 71 85-173 11-83 (339)
341 3sbq_A Nitrous-oxide reductase 89.5 11 0.00038 33.6 14.1 82 76-166 326-408 (638)
342 2uvk_A YJHT; unknown function, 89.2 8.3 0.00028 31.7 18.2 59 218-279 168-234 (357)
343 2be1_A Serine/threonine-protei 88.5 3.7 0.00013 34.0 9.8 114 147-277 10-134 (339)
344 1bpo_A Protein (clathrin); cla 88.4 11 0.00039 32.4 16.3 107 144-276 74-191 (494)
345 3q6k_A 43.2 kDa salivary prote 85.1 16 0.00055 30.7 23.0 210 71-315 85-340 (381)
346 4gq2_M Nucleoporin NUP120; bet 84.7 29 0.00098 33.3 15.7 39 130-175 237-275 (950)
347 3sbq_A Nitrous-oxide reductase 81.3 6.4 0.00022 35.0 8.2 74 194-273 325-408 (638)
348 3zwu_A Alkaline phosphatase PH 80.7 7.1 0.00024 35.0 8.5 57 246-315 479-547 (592)
349 2wg3_C Hedgehog-interacting pr 80.5 11 0.00036 32.8 9.5 54 193-253 15-79 (463)
350 4a9v_A PHOX; hydrolase, beta-p 78.5 12 0.00041 33.4 9.1 60 244-316 477-548 (592)
351 4gq2_M Nucleoporin NUP120; bet 74.4 21 0.00072 34.2 10.3 34 244-277 237-270 (950)
352 1xi4_A Clathrin heavy chain; a 71.6 31 0.001 34.7 10.6 107 144-276 74-191 (1630)
353 3ott_A Two-component system se 67.6 77 0.0026 29.2 21.4 162 75-277 375-549 (758)
354 4fhn_B Nucleoporin NUP120; pro 67.3 8.3 0.00028 37.8 6.0 32 144-175 246-277 (1139)
355 4fhn_B Nucleoporin NUP120; pro 63.5 22 0.00074 34.9 8.1 33 245-277 240-272 (1139)
356 3f7f_A Nucleoporin NUP120; nuc 63.3 12 0.00041 34.3 5.8 38 129-175 222-259 (729)
357 2wg3_C Hedgehog-interacting pr 57.1 95 0.0033 26.8 14.4 30 129-165 14-44 (463)
358 3f7f_A Nucleoporin NUP120; nuc 54.0 32 0.0011 31.6 6.9 32 75-108 224-255 (729)
359 3q6k_A 43.2 kDa salivary prote 51.1 1.1E+02 0.0037 25.7 21.2 118 91-224 178-303 (381)
360 3zwu_A Alkaline phosphatase PH 51.0 68 0.0023 28.8 8.4 61 194-260 478-548 (592)
361 4a9v_A PHOX; hydrolase, beta-p 47.0 1.1E+02 0.0038 27.4 8.9 61 193-260 477-548 (592)
362 3b7f_A Glycosyl hydrolase, BNR 44.1 1.4E+02 0.0046 24.7 18.6 69 193-268 116-203 (394)
363 3ott_A Two-component system se 42.0 2.1E+02 0.0071 26.3 22.7 121 129-279 146-266 (758)
364 3qhy_B Beta-lactamase inhibito 41.6 1.3E+02 0.0044 23.8 12.3 50 93-166 41-90 (282)
365 3qhy_B Beta-lactamase inhibito 32.7 1.8E+02 0.0062 22.9 15.1 66 193-273 181-246 (282)
366 1olz_A Semaphorin 4D; developm 30.3 2.3E+02 0.008 25.8 8.7 73 193-268 398-477 (663)
367 1q47_A Semaphorin 3A; beta pro 28.8 1.9E+02 0.0063 25.3 7.5 75 193-268 405-487 (495)
368 3b7f_A Glycosyl hydrolase, BNR 28.4 2.5E+02 0.0085 23.1 14.4 70 193-269 56-143 (394)
369 3al9_A Plexin-A2; beta-propell 27.3 1.8E+02 0.0061 25.7 7.2 73 193-268 401-476 (539)
370 3kvp_A Uncharacterized protein 24.8 1.2E+02 0.004 18.1 5.0 32 207-239 28-59 (72)
371 4gz8_A Semaphorin-3A; multi-do 23.8 3.2E+02 0.011 24.9 8.3 60 209-268 430-495 (667)
372 3nvq_A Semaphorin-7A; beta-pro 23.1 3.4E+02 0.012 24.3 8.1 60 209-268 381-444 (590)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=260.93 Aligned_cols=222 Identities=18% Similarity=0.180 Sum_probs=176.4
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVS 97 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 97 (318)
..+++|+.||+|++||+.+++.+........+|.+. +.+++|+|+ +++|++|+.||+|+
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~---V~~v~~spd------------------g~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDI---VSTVSVLSS------------------GTQAVSGSKDICIK 152 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSC---EEEEEECTT------------------SSEEEEEETTSCEE
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCC---EEEEEECCC------------------CCEEEEEeCCCeEE
Confidence 568999999999999999988755544322233333 333555555 49999999999999
Q ss_pred EEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC-cEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ-VLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
+||++++ +.+..+.+|.+.|++++| ++++ .+|++++.|++|++||+++++....+...
T Consensus 153 iwd~~~~--------------~~~~~~~~h~~~V~~~~~-------~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 153 VWDLAQQ--------------VVLSSYRAHAAQVTCVAA-------SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp EEETTTT--------------EEEEEECCCSSCEEEEEE-------CSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred EEECCCC--------------cEEEEEcCcCCceEEEEe-------cCCCCCceeeeccccccccccccccceeeeeecc
Confidence 9999984 467889999999999999 6766 58899999999999999998877765432
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCC-C
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG-C 255 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 255 (318)
. +...+.+++|+ |.++.+|++|+.||.|++| |.++++ ++.++.+|...|++++|+|++ +
T Consensus 212 ~------------~~~~~~~~~~~----p~~~~~l~sg~~dg~v~~w--d~~~~~--~~~~~~~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 212 A------------PGYLPTSLAWH----PQQSEVFVFGDENGTVSLV--DTKSTS--CVLSSAVHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp --------------CCCEEEEEEC----SSCTTEEEEEETTSEEEEE--ESCC----CCEEEECCSSCEEEEEECSSSSC
T ss_pred e------------eeccceeeeec----CCCCcceEEeccCCcEEEE--ECCCCc--EEEEEcCCCCCEEEEEEccCCCe
Confidence 2 33468899998 2356789999999999999 566665 677899999999999999997 5
Q ss_pred EEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc-EEEEE
Q 021036 256 CLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL-VVAMV 316 (318)
Q Consensus 256 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~~~ 316 (318)
+|++|+.|++|++||+.++++..+. +|.+.|++++|+|+++ +|+++
T Consensus 272 ~lasgs~D~~i~vwd~~~~~~~~~~---------------~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 272 FLASLSEDCSLAVLDSSLSELFRSQ---------------AHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp CEEEEETTSCEEEECTTCCEEEEEC---------------CCSSCEEEEEECSSSTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEc---------------CCCCCEEEEEEeCCCCeEEEEE
Confidence 8999999999999999888765432 3667999999999886 56665
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=255.22 Aligned_cols=239 Identities=21% Similarity=0.224 Sum_probs=189.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------CCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------LSSK 71 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~~~~ 71 (318)
+...+++||.|+++++||+.+++....... .+|... +.+++|+|++. +..|
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l--~gh~~~---v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~ 121 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQWSL--EGHQLG---VVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAG 121 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSC---EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeeeeee--ccCCCC---EEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCC
Confidence 345689999999999999977543222111 113322 22244443321 2345
Q ss_pred cccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE
Q 021036 72 KYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV 151 (318)
Q Consensus 72 ~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~ 151 (318)
...+.+++++|++++|++|+.||.|++|++++++ ....+..|...|.+++| ++++++|+
T Consensus 122 ~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--------------~~~~~~~~~~~v~~~~~-------spdg~~la 180 (321)
T 3ow8_A 122 PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--------------KEYSLDTRGKFILSIAY-------SPDGKYLA 180 (321)
T ss_dssp TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS--------------EEEEEECSSSCEEEEEE-------CTTSSEEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--------------eeEEecCCCceEEEEEE-------CCCCCEEE
Confidence 6677888899999999999999999999988744 45567788899999999 89999999
Q ss_pred EEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCe
Q 021036 152 TGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNK 231 (318)
Q Consensus 152 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 231 (318)
+|+.|+.|++||+++++.+..+..+. .+|.+++|+ |++.+|++|+.|+.|++| +.+..+
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~~h~--------------~~v~~l~~s-----pd~~~l~s~s~dg~i~iw--d~~~~~ 239 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLEGHA--------------MPIRSLTFS-----PDSQLLVTASDDGYIKIY--DVQHAN 239 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCS--------------SCCCEEEEC-----TTSCEEEEECTTSCEEEE--ETTTCC
T ss_pred EEcCCCeEEEEECCCCcEEEEEcccC--------------CceeEEEEc-----CCCCEEEEEcCCCeEEEE--ECCCcc
Confidence 99999999999999998877776544 489999999 999999999999999999 555655
Q ss_pred eeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc
Q 021036 232 FDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 232 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
.+..+.+|...|.+++|+|++.+|++++.|++|++||+.++..... +.+|...|.+++|+|+++
T Consensus 240 --~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~--------------~~~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 240 --LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT--------------FFDHQDQVWGVKYNGNGS 303 (321)
T ss_dssp --EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--------------ECCCSSCEEEEEECTTSS
T ss_pred --eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE--------------EcCCCCcEEEEEECCCCC
Confidence 5677889999999999999999999999999999999988765532 233566999999999999
Q ss_pred EEEEEe
Q 021036 312 VVAMVQ 317 (318)
Q Consensus 312 ~l~~~~ 317 (318)
+|+++.
T Consensus 304 ~l~s~~ 309 (321)
T 3ow8_A 304 KIVSVG 309 (321)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999874
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-36 Score=262.60 Aligned_cols=236 Identities=15% Similarity=0.246 Sum_probs=197.4
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------CCCCc
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------LSSKK 72 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~~~~~ 72 (318)
...+++|+.|++|++||+.+++....+.. |.+. +.+++|+|++. +.+|.
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~----h~~~---V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 192 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGDFERTLKG----HTDS---VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCCCCEEECC----CSSC---EEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec----cCCc---EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC
Confidence 34689999999999999999887665543 3333 33355555432 45788
Q ss_pred ccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE
Q 021036 73 YPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 73 ~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
.+|.+++++|++++|++|+.|+.|++||+.++. .+..+.+|...|.++.| ++++.+|++
T Consensus 193 ~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~--------------~~~~~~~h~~~v~~~~~-------~~~g~~l~s 251 (410)
T 1vyh_C 193 HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY--------------CVKTFTGHREWVRMVRP-------NQDGTLIAS 251 (410)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEE-------CTTSSEEEE
T ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEeCCCccEEEEEE-------CCCCCEEEE
Confidence 899999999999999999999999999999854 56778899999999999 899999999
Q ss_pred EeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC--------------------ceEEE
Q 021036 153 GSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR--------------------LMLLA 212 (318)
Q Consensus 153 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~--------------------~~~l~ 212 (318)
|+.|++|++||+.++++...+..|. ..|.+++|+ |+ +.+|+
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~l~ 312 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHR--------------HVVECISWA-----PESSYSSISEATGSETKKSGKPGPFLL 312 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCS--------------SCEEEEEEC-----CSCGGGGGGGCCSCC-------CCEEE
T ss_pred EcCCCeEEEEECCCCceeeEecCCC--------------ceEEEEEEc-----CcccccchhhhccccccccCCCCCEEE
Confidence 9999999999999988777665544 478999998 54 67999
Q ss_pred EEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccc
Q 021036 213 VGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCT 292 (318)
Q Consensus 213 ~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
+|+.|+.|++| |.+++. .+..+.+|...|.+++|+|+|++|++++.|++|++||+.++....
T Consensus 313 sgs~D~~i~iw--d~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~-------------- 374 (410)
T 1vyh_C 313 SGSRDKTIKMW--DVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK-------------- 374 (410)
T ss_dssp EEETTSEEEEE--ETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE--------------
T ss_pred EEeCCCeEEEE--ECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE--------------
Confidence 99999999999 666766 677889999999999999999999999999999999998765432
Q ss_pred cCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 293 DLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 293 ~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+.+|...|++++|+|++.+|++|.
T Consensus 375 ~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 375 TLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp EEECCSSCEEEEEECSSSSCEEEEE
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 1223566899999999999999985
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-35 Score=252.69 Aligned_cols=239 Identities=16% Similarity=0.197 Sum_probs=191.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc----------------------------
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR---------------------------- 67 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~---------------------------- 67 (318)
+...+++||.|+++++||..+++....+.. +... +.+++|+|++.
T Consensus 75 d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~----~~~~---v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~ 147 (354)
T 2pbi_B 75 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTM----PCTW---VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 147 (354)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEEC----SSSC---CCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCcceEEec----CCCC---EEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccc
Confidence 346789999999999999988776554443 2222 33466665432
Q ss_pred --CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC
Q 021036 68 --LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145 (318)
Q Consensus 68 --~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 145 (318)
+..|...|.++.+++++..|++++.||+|++||++++ +.+..+.+|...|.+++|.| ++
T Consensus 148 ~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------------~~~~~~~~h~~~v~~~~~~~-----~~ 208 (354)
T 2pbi_B 148 KSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------------QLLQSFHGHGADVLCLDLAP-----SE 208 (354)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------------CEEEEEECCSSCEEEEEECC-----CS
T ss_pred eeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------------eEEEEEcCCCCCeEEEEEEe-----CC
Confidence 2347788999999999999999999999999999985 46678899999999999922 22
Q ss_pred CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeee
Q 021036 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKC 225 (318)
Q Consensus 146 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~ 225 (318)
++++|++|+.||+|++||++++++...+..|. ..|++++|+ |++.+|++|+.|++|++|
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~--------------~~v~~v~~~-----p~~~~l~s~s~D~~v~lw-- 267 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHE--------------SDVNSVRYY-----PSGDAFASGSDDATCRLY-- 267 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCS--------------SCEEEEEEC-----TTSSEEEEEETTSCEEEE--
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--------------CCeEEEEEe-----CCCCEEEEEeCCCeEEEE--
Confidence 56899999999999999999998877766544 489999999 999999999999999999
Q ss_pred ccCCCeeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeE
Q 021036 226 DISCNKFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLG 303 (318)
Q Consensus 226 ~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 303 (318)
|++..+ .+..+. .+...+.+++|+|++.+|++++.|++|++||+.++.... .+.+|...|.+
T Consensus 268 d~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~--------------~l~~h~~~v~~ 331 (354)
T 2pbi_B 268 DLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS--------------ILFGHENRVST 331 (354)
T ss_dssp ETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE--------------EECCCSSCEEE
T ss_pred ECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE--------------EEECCCCcEEE
Confidence 555554 333333 234578999999999999999999999999998765442 22346679999
Q ss_pred EEEcCCCcEEEEEe
Q 021036 304 MAVSPGNLVVAMVQ 317 (318)
Q Consensus 304 v~~sp~~~~l~~~~ 317 (318)
++|+|||++|++|.
T Consensus 332 l~~spdg~~l~sgs 345 (354)
T 2pbi_B 332 LRVSPDGTAFCSGS 345 (354)
T ss_dssp EEECTTSSCEEEEE
T ss_pred EEECCCCCEEEEEc
Confidence 99999999999985
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-35 Score=246.62 Aligned_cols=248 Identities=11% Similarity=0.099 Sum_probs=189.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhc-------cccccc-----cceeeeecccc-----cCCCCccccccc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYA-------SRSAML-----HSLAVAWSPVL-----RLSSKKYPVPQN 78 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~w~p~~-----~~~~~~~~v~~~ 78 (318)
+...+++++.|+++++||+++++.+..+...... ..+..+ ......|+... .+.+|...|.++
T Consensus 24 ~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~ 103 (304)
T 2ynn_A 24 TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI 103 (304)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 3456899999999999999988765554432111 111100 01123344322 145788999999
Q ss_pred CCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCC
Q 021036 79 GSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDG 157 (318)
Q Consensus 79 ~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~ 157 (318)
+++|++++|++|+.||+|++||++++. .....+.+|...|.+++| +| ++.+|++|+.|+
T Consensus 104 ~~~~~~~~l~sgs~D~~v~lWd~~~~~-------------~~~~~~~~h~~~v~~v~~-------~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 104 AVHPTKPYVLSGSDDLTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAF-------NPKDPSTFASGCLDR 163 (304)
T ss_dssp EECSSSSEEEEEETTSCEEEEEGGGTT-------------EEEEEECCCCSCEEEEEE-------CTTCTTEEEEEETTS
T ss_pred EEcCCCCEEEEECCCCeEEEEECCCCc-------------chhhhhcccCCcEEEEEE-------CCCCCCEEEEEeCCC
Confidence 999999999999999999999998753 345678899999999999 66 678999999999
Q ss_pred cEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeee
Q 021036 158 SVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGS 237 (318)
Q Consensus 158 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 237 (318)
+|++||++++.....+.. .+...+..+.+++. +++.+|++|+.|+.|++| |.++++ .+..
T Consensus 164 ~v~iwd~~~~~~~~~~~~-------------~~~~~v~~~~~~~~---~~~~~l~s~s~D~~i~iW--d~~~~~--~~~~ 223 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTT-------------GQERGVNYVDYYPL---PDKPYMITASDDLTIKIW--DYQTKS--CVAT 223 (304)
T ss_dssp EEEEEETTCSSCSEEEEC-------------CCTTCEEEEEECCS---TTCCEEEEEETTSEEEEE--ETTTTE--EEEE
T ss_pred eEEEEECCCCCccceecc-------------CCcCcEEEEEEEEc---CCCCEEEEEcCCCeEEEE--eCCCCc--ccee
Confidence 999999987765444332 23347888888710 367899999999999999 566666 7788
Q ss_pred eecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc--EEEE
Q 021036 238 YNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL--VVAM 315 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~l~~ 315 (318)
+.+|...|.+++|+|++.+|++|+.||+|++||+.+++..... ..|...+.+++|+|++. ++|+
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~as 289 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL--------------NVGLERSWCIATHPTGRKNYIAS 289 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE--------------CCSSSSEEEEEECTTCGGGCEEE
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec--------------cCCCccEEEEEECCCCCceEEEE
Confidence 9999999999999999999999999999999999887655322 22445889999999875 5787
Q ss_pred Ee
Q 021036 316 VQ 317 (318)
Q Consensus 316 ~~ 317 (318)
|.
T Consensus 290 g~ 291 (304)
T 2ynn_A 290 GF 291 (304)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.5e-35 Score=251.82 Aligned_cols=236 Identities=17% Similarity=0.189 Sum_probs=188.5
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc----------------------------
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR---------------------------- 67 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~---------------------------- 67 (318)
+...+++|+.|+++++||+.+++.+..+.. +... +.+++|+|++.
T Consensus 66 d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~----~~~~---v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~ 138 (340)
T 1got_B 66 DSRLLLSASQDGKLIIWDSYTTNKVHAIPL----RSSW---VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138 (340)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEEC----SSSC---EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCCcceEeec----CCcc---EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEE
Confidence 455689999999999999998876555443 2222 22345544431
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 147 (318)
+.+|...|.++.+++++. +++++.|+.|++||++++ +.+..+.+|...|.+++| ++++
T Consensus 139 ~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~--------------~~~~~~~~h~~~v~~~~~-------~~~~ 196 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG--------------QQTTTFTGHTGDVMSLSL-------APDT 196 (340)
T ss_dssp EECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEE-------CTTS
T ss_pred ecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC--------------cEEEEEcCCCCceEEEEE-------CCCC
Confidence 345777888888887765 788899999999999874 466788899999999999 8999
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
++|++|+.|++|++||+++++....+..|. ..|.+++|+ |++++|++|+.||.|++| |.
T Consensus 197 ~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~--------------~~v~~v~~~-----p~~~~l~s~s~d~~v~iw--d~ 255 (340)
T 1got_B 197 RLFVSGACDASAKLWDVREGMCRQTFTGHE--------------SDINAICFF-----PNGNAFATGSDDATCRLF--DL 255 (340)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCS--------------SCEEEEEEC-----TTSSEEEEEETTSCEEEE--ET
T ss_pred CEEEEEeCCCcEEEEECCCCeeEEEEcCCc--------------CCEEEEEEc-----CCCCEEEEEcCCCcEEEE--EC
Confidence 999999999999999999988877766544 489999999 999999999999999999 55
Q ss_pred CCCeeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEE
Q 021036 228 SCNKFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMA 305 (318)
Q Consensus 228 ~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 305 (318)
+..+ .+..+. .+...|++++|+|+|++|++|+.|+.|++||+.++.... .+.+|...|.+++
T Consensus 256 ~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~--------------~~~~h~~~v~~~~ 319 (340)
T 1got_B 256 RADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG--------------VLAGHDNRVSCLG 319 (340)
T ss_dssp TTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--------------EEECCSSCEEEEE
T ss_pred CCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee--------------EeecCCCcEEEEE
Confidence 5555 333333 234579999999999999999999999999998765442 2234667999999
Q ss_pred EcCCCcEEEEEe
Q 021036 306 VSPGNLVVAMVQ 317 (318)
Q Consensus 306 ~sp~~~~l~~~~ 317 (318)
|+|+|++||+|.
T Consensus 320 ~s~dg~~l~s~s 331 (340)
T 1got_B 320 VTDDGMAVATGS 331 (340)
T ss_dssp ECTTSSCEEEEE
T ss_pred EcCCCCEEEEEc
Confidence 999999999984
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=246.85 Aligned_cols=198 Identities=18% Similarity=0.203 Sum_probs=156.8
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++||+++++...... ...+|...|.+++|+|++++|++|+.|+.
T Consensus 27 ~g~~las~~~D~~i~iw~~~~~~~~~~~~----------------------~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 27 AGTLLASCGGDRRIRIWGTEGDSWICKSV----------------------LSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp TSSCEEEEETTSCEEEEEEETTEEEEEEE----------------------ECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCEEEEEcCCCeEEEEEcCCCcceeeee----------------------eccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 45678999999999999998764321111 01234444445555555599999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
|+||+...++ .+.+..+.+|...|.+++| ++++++|++|+.|++|++||++.+.....+
T Consensus 85 v~iw~~~~~~------------~~~~~~~~~h~~~v~~v~~-------sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~-- 143 (345)
T 3fm0_A 85 TCIWKKNQDD------------FECVTTLEGHENEVKSVAW-------APSGNLLATCSRDKSVWVWEVDEEDEYECV-- 143 (345)
T ss_dssp EEEEEECCC-------------EEEEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEEECTTSCEEEE--
T ss_pred EEEEEccCCC------------eEEEEEccCCCCCceEEEE-------eCCCCEEEEEECCCeEEEEECCCCCCeEEE--
Confidence 9999998754 3466788999999999999 899999999999999999999876432211
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC 255 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 255 (318)
.....|...|.+++|+ |++.+|++|+.|+.|++|+ .+.........+.+|...|++++|+|+|+
T Consensus 144 ---------~~~~~h~~~v~~~~~~-----p~~~~l~s~s~d~~i~~w~--~~~~~~~~~~~~~~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 144 ---------SVLNSHTQDVKHVVWH-----PSQELLASASYDDTVKLYR--EEEDDWVCCATLEGHESTVWSLAFDPSGQ 207 (345)
T ss_dssp ---------EEECCCCSCEEEEEEC-----SSSSCEEEEETTSCEEEEE--EETTEEEEEEEECCCSSCEEEEEECTTSS
T ss_pred ---------EEecCcCCCeEEEEEC-----CCCCEEEEEeCCCcEEEEE--ecCCCEEEEEEecCCCCceEEEEECCCCC
Confidence 1123355689999999 9999999999999999995 44555556678899999999999999999
Q ss_pred EEEEecCCCcEEEEEec
Q 021036 256 CLYSCSQDNFVRSWIFH 272 (318)
Q Consensus 256 ~l~s~~~d~~v~iwd~~ 272 (318)
+|++++.|++|++||..
T Consensus 208 ~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 208 RLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred EEEEEeCCCeEEEeccc
Confidence 99999999999999974
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.9e-35 Score=249.29 Aligned_cols=242 Identities=17% Similarity=0.182 Sum_probs=191.2
Q ss_pred CccceEEeeC------CCceeEeecCCCCCCCceecchhccccccccceeeeeccccc----------------------
Q 021036 16 NTHPTVAASK------SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR---------------------- 67 (318)
Q Consensus 16 ~~~~~~t~s~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~---------------------- 67 (318)
+...++++|. |+.+++|+..++.....+......|... +.+++|+|++.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~---V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~ 129 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAG---VTDVAWVSEKGILVASDSGAVELWEILEKESLL 129 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSC---EEEEEEETTTEEEEEETTSCEEEC--------C
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCC---EEEEEEcCCCCEEEEECCCEEEEeeccccceeE
Confidence 4566788887 6778889888776544443333334443 44577777543
Q ss_pred -----CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCC
Q 021036 68 -----LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSD 142 (318)
Q Consensus 68 -----~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 142 (318)
..+|..+|.++++++++++|++|+.||.|++||++++ +.+..+.+|...|++++|
T Consensus 130 ~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~--------------~~~~~~~~h~~~v~~v~~------ 189 (357)
T 4g56_B 130 VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK--------------AVLKSYNAHSSEVNCVAA------ 189 (357)
T ss_dssp CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEE------
T ss_pred EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------------cEEEEEcCCCCCEEEEEE------
Confidence 1257889999999999999999999999999999984 466788999999999999
Q ss_pred CCCCC-cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCCCcE
Q 021036 143 SSNPQ-VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGSGSF 220 (318)
Q Consensus 143 ~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~dg~i 220 (318)
++++ .+|++++.|++|++||+++++....+.... +...+.+++|+ |+ +.+|++|+.|+.|
T Consensus 190 -s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~------------~~~~v~~v~~s-----p~~~~~la~g~~d~~i 251 (357)
T 4g56_B 190 -CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA------------SDTIPTSVTWH-----PEKDDTFACGDETGNV 251 (357)
T ss_dssp -CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT------------CCSCEEEEEEC-----TTSTTEEEEEESSSCE
T ss_pred -ccCCCceeeeeccCCceEEEECCCCceeeeeeecc------------ccccccchhhh-----hcccceEEEeecccce
Confidence 6665 478999999999999999887665544322 34478999999 66 5789999999999
Q ss_pred EEeeeccCCCeeeEeeeeecccCceeEEEEcCCC-CEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcce
Q 021036 221 DLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG-CCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFV 299 (318)
Q Consensus 221 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 299 (318)
++| |.++.+ .+..+.+|...|++++|+|++ ++|++++.|++|+|||++++++.... +|.+
T Consensus 252 ~~w--d~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~---------------~H~~ 312 (357)
T 4g56_B 252 SLV--NIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL---------------SHRD 312 (357)
T ss_dssp EEE--ESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC---------------CCSS
T ss_pred eEE--ECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC---------------CCCC
Confidence 999 566665 667788999999999999987 58999999999999999988766433 3667
Q ss_pred eeeEEEEcC-CCcEEEEEe
Q 021036 300 SCLGMAVSP-GNLVVAMVQ 317 (318)
Q Consensus 300 ~v~~v~~sp-~~~~l~~~~ 317 (318)
.|++|+|+| |+++|+++.
T Consensus 313 ~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 313 FVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp CEEEEEECSSSTTEEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEc
Confidence 999999999 899999874
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-34 Score=241.49 Aligned_cols=231 Identities=13% Similarity=0.165 Sum_probs=179.5
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEec
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG 91 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~ 91 (318)
+.+.+...+++||.|+++++||+......... |...+.+|..+|.++++++++++|++|+
T Consensus 25 ~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~--------------------~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 25 TSAGQPNLLLSASRDKTLISWKLTGDDQKFGV--------------------PVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEEEEETTEEEE--------------------EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ccCCCccEEEEecCCccEEEecCCCCCccccc--------------------cceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 44445567999999999999998653321100 1112445667777777777779999999
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceee
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQK 171 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 171 (318)
.|++|++||++++ +.+..+.+|...|.+++| ++++.+|++|+.|++|++||++. ++..
T Consensus 85 ~D~~v~~wd~~~~--------------~~~~~~~~h~~~v~~~~~-------~~~~~~l~s~s~D~~i~vwd~~~-~~~~ 142 (319)
T 3frx_A 85 WDKTLRLWDVATG--------------ETYQRFVGHKSDVMSVDI-------DKKASMIISGSRDKTIKVWTIKG-QCLA 142 (319)
T ss_dssp TTSEEEEEETTTT--------------EEEEEEECCSSCEEEEEE-------CTTSCEEEEEETTSCEEEEETTS-CEEE
T ss_pred CCCEEEEEECCCC--------------CeeEEEccCCCcEEEEEE-------cCCCCEEEEEeCCCeEEEEECCC-CeEE
Confidence 9999999999984 466788999999999999 89999999999999999999964 4444
Q ss_pred eecccccccccceeeeeecccceeEEEEeeccC-CCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEE
Q 021036 172 SAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQ-SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAW 250 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 250 (318)
.+.. |...|.++.+.+... .+++..+++++.|+.|++| +.+..+ ....+.+|...|.+++|
T Consensus 143 ~~~~--------------h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~w--d~~~~~--~~~~~~~h~~~v~~~~~ 204 (319)
T 3frx_A 143 TLLG--------------HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW--NLNQFQ--IEADFIGHNSNINTLTA 204 (319)
T ss_dssp EECC--------------CSSCEEEEEECCC------CCEEEEEETTSCEEEE--ETTTTE--EEEEECCCCSCEEEEEE
T ss_pred EEec--------------cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEE--ECCcch--hheeecCCCCcEEEEEE
Confidence 4443 344788999981100 0145589999999999999 555655 56678899999999999
Q ss_pred cCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 251 AFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 251 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+|+|++|++++.|++|++||+.+++........ ..|.+++|+|++.+|+++.
T Consensus 205 sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 205 SPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---------------DEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---------------SCEEEEEECSSSSEEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---------------CcEEEEEEcCCCCEEEEEc
Confidence 999999999999999999999887654432222 2789999999999998864
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.7e-34 Score=246.28 Aligned_cols=242 Identities=17% Similarity=0.190 Sum_probs=187.2
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccc-----------------------------
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVL----------------------------- 66 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~----------------------------- 66 (318)
+...+++||.|+++++||+.+++....+.. |... +.+++|+|++
T Consensus 77 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~----h~~~---v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~ 149 (380)
T 3iz6_a 77 EKNWIVSASQDGRLIVWNALTSQKTHAIKL----HCPW---VMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPV 149 (380)
T ss_dssp TSSCEEEEETTSEEEEEETTTTEEEEEEEC----CCTT---CCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCccceEEec----CCCC---EEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccc
Confidence 445689999999999999998876655543 3332 2235555543
Q ss_pred --cCCCCcccccccCCCCC-ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeee-----ccccccEEEEEeee
Q 021036 67 --RLSSKKYPVPQNGSSNW-FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF-----QAHNSWITSISLAV 138 (318)
Q Consensus 67 --~~~~~~~~v~~~~~s~~-~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~p 138 (318)
.+.+|...|.++.++++ +..|++|+.|++|++||+.+++. +..+ .+|...|.++.|
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~-- 213 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR--------------ISIFGSEFPSGHTADVLSLSI-- 213 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE--------------EEEECCCSSSSCCSCEEEEEE--
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE--------------EEEeecccCCCCccCeEEEEe--
Confidence 14578888999999997 56799999999999999998653 2333 579999999999
Q ss_pred ecCCCCCCCcEEEEEeCCCcEEEEECCC-cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC
Q 021036 139 LSSDSSNPQVLLVTGSSDGSVRIWDGYI-QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS 217 (318)
Q Consensus 139 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d 217 (318)
++.++.+|++|+.|++|++||++. ++....+.. |...|++++|+ |++.+|++|+.|
T Consensus 214 ----~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--------------h~~~v~~v~~~-----p~~~~l~s~s~D 270 (380)
T 3iz6_a 214 ----NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--------------HEGDINSVKFF-----PDGQRFGTGSDD 270 (380)
T ss_dssp ----CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC--------------CSSCCCEEEEC-----TTSSEEEEECSS
T ss_pred ----ecCCCCEEEEEECCCeEEEEECCCCCcceEEECC--------------cCCCeEEEEEe-----cCCCeEEEEcCC
Confidence 334788999999999999999984 455555544 44589999999 999999999999
Q ss_pred CcEEEeeeccCCCeeeEeeeeecc-------cCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccc
Q 021036 218 GSFDLWKCDISCNKFDKVGSYNAH-------DQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQS 290 (318)
Q Consensus 218 g~i~vw~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 290 (318)
|+|++| |++++. .+..+..+ ...|++++|+|+|++|++|+.||.|++||+..+........
T Consensus 271 ~~i~lw--d~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~-------- 338 (380)
T 3iz6_a 271 GTCRLF--DMRTGH--QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT-------- 338 (380)
T ss_dssp SCEEEE--ETTTTE--EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC--------
T ss_pred CeEEEE--ECCCCc--EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec--------
Confidence 999999 566665 44444332 23489999999999999999999999999987655432111
Q ss_pred cccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 291 CTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 291 ~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
...+|.+.|.+++|+|||++|++|.
T Consensus 339 --~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 339 --LQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp --SCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred --ccCCCCCceEEEEECCCCCEEEEee
Confidence 1134778999999999999999984
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-32 Score=229.51 Aligned_cols=233 Identities=17% Similarity=0.214 Sum_probs=172.3
Q ss_pred CCccceEEeeCCCceeEeecCCCC--CCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecC
Q 021036 15 SNTHPTVAASKSKGNSITKIPSNC--CLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGR 92 (318)
Q Consensus 15 ~~~~~~~t~s~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~ 92 (318)
.+...+++|+.|++|++||++... .+..+. +|... +.+++|+|.. ++++|++|+.
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~----gH~~~---V~~v~~s~~~----------------~g~~l~s~s~ 75 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLT----GHEGP---VWRVDWAHPK----------------FGTILASCSY 75 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC----CCSSC---EEEEEECCGG----------------GCSEEEEEET
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc----cccCC---eEEEEecCCC----------------cCCEEEEEcC
Confidence 345678999999999999997542 221111 13333 3335554320 1589999999
Q ss_pred CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC--CcEEEEEeCCCcEEEEECCCccee
Q 021036 93 SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP--QVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 93 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
||+|+|||+++++ ...+..+.+|...|.+++| +++ +.+|++++.|++|++||++.+...
T Consensus 76 D~~v~iWd~~~~~------------~~~~~~~~~h~~~v~~v~~-------~p~~~g~~l~s~s~d~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 76 DGKVMIWKEENGR------------WSQIAVHAVHSASVNSVQW-------APHEYGPMLLVASSDGKVSVVEFKENGTT 136 (297)
T ss_dssp TTEEEEEEBSSSC------------BCCCEEECCCSSCEEEEEE-------CCGGGCSEEEEEETTSEEEEEEBCSSSCB
T ss_pred CCEEEEEEcCCCc------------eEEEEEeecCCCceeEEEe-------CcCCCCcEEEEEECCCcEEEEEecCCCce
Confidence 9999999998764 2244567789999999999 665 789999999999999999875321
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCC-------------ceEEEEEeCCCcEEEeeeccCCCeeeEeee
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-------------LMLLAVGKGSGSFDLWKCDISCNKFDKVGS 237 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-------------~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 237 (318)
.. .....|...|.+++|+ |+ +++|++|+.|+.|++||++...........
T Consensus 137 ~~------------~~~~~h~~~v~~~~~~-----p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~ 199 (297)
T 2pm7_B 137 SP------------IIIDAHAIGVNSASWA-----PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (297)
T ss_dssp CC------------EEEECCSSCEEEEEEC-----CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred ee------------eeeecccCccceEeec-----CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE
Confidence 10 1123456689999998 65 579999999999999976544444445667
Q ss_pred eecccCceeEEEEcCCC---CEEEEecCCCcEEEEEecCCce--eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcE
Q 021036 238 YNAHDQVVTGLAWAFDG---CCLYSCSQDNFVRSWIFHGNSL--SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLV 312 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 312 (318)
+.+|...|.+++|+|++ .+|++++.|++|++||+..... ...... ...|...|.+++|+|+|++
T Consensus 200 l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~-----------~~~~~~~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 200 LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLK-----------EEKFPDVLWRASWSLSGNV 268 (297)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS-----------SSCCSSCEEEEEECSSSCC
T ss_pred ecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeee-----------cccCCCcEEEEEECCCCCE
Confidence 88999999999999985 7999999999999999976431 111110 1235568999999999999
Q ss_pred EEEEe
Q 021036 313 VAMVQ 317 (318)
Q Consensus 313 l~~~~ 317 (318)
||++.
T Consensus 269 las~~ 273 (297)
T 2pm7_B 269 LALSG 273 (297)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99874
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.8e-33 Score=234.76 Aligned_cols=226 Identities=15% Similarity=0.145 Sum_probs=174.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++||+.+.+....... +...+.+|..+|.++++++++.+|++|+.|++
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~------------------~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~ 99 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGI------------------PHKALTGHNHFVSDLALSQENCFAISSSWDKT 99 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEE------------------EEEEECCCSSCEEEEEECSSTTEEEEEETTSE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCccccccc------------------ccchhccCCCceEEEEECCCCCEEEEEcCCCc
Confidence 566799999999999999976543211100 11134566677777777777799999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
|++||+++++ .+..+.+|...|.+++| ++++++|++++.|++|++||+.... ......
T Consensus 100 v~lwd~~~~~--------------~~~~~~~h~~~v~~v~~-------sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~ 157 (343)
T 2xzm_R 100 LRLWDLRTGT--------------TYKRFVGHQSEVYSVAF-------SPDNRQILSAGAEREIKLWNILGEC-KFSSAE 157 (343)
T ss_dssp EEEEETTSSC--------------EEEEEECCCSCEEEEEE-------CSSTTEEEEEETTSCEEEEESSSCE-EEECCT
T ss_pred EEEEECCCCc--------------EEEEEcCCCCcEEEEEE-------CCCCCEEEEEcCCCEEEEEeccCCc-eeeeec
Confidence 9999999854 56778899999999999 8999999999999999999997432 222110
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCc----------eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCce
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL----------MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVV 245 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~----------~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v 245 (318)
. ..|...|.+++|+ |++ .+|++++.||.|++|| . ... ....+.+|...|
T Consensus 158 ~-----------~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~l~s~~~d~~i~iwd--~-~~~--~~~~~~~h~~~v 216 (343)
T 2xzm_R 158 K-----------ENHSDWVSCVRYS-----PIMKSANKVQPFAPYFASVGWDGRLKVWN--T-NFQ--IRYTFKAHESNV 216 (343)
T ss_dssp T-----------TSCSSCEEEEEEC-----CCCCSCSCCCSSCCEEEEEETTSEEEEEE--T-TTE--EEEEEECCSSCE
T ss_pred c-----------cCCCceeeeeeec-----cccccccccCCCCCEEEEEcCCCEEEEEc--C-CCc--eeEEEcCccccc
Confidence 0 1345589999998 665 7999999999999995 3 233 566788999999
Q ss_pred eEEEEcCCCCEEEEecCCCcEEEEEecCCc-eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 246 TGLAWAFDGCCLYSCSQDNFVRSWIFHGNS-LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 246 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+++|+|+|++|++|+.|+.|++||+.... ...... +...|.+++|+|++++++++.
T Consensus 217 ~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~---------------~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 217 NHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD---------------AGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE---------------CSSCEEEEEECSSSCEEEEEE
T ss_pred eEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec---------------CCCcEEEEEECCCCCEEEEEC
Confidence 999999999999999999999999995422 221111 123689999999999998763
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.4e-33 Score=252.94 Aligned_cols=271 Identities=17% Similarity=0.140 Sum_probs=196.5
Q ss_pred CCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------C
Q 021036 13 KDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------L 68 (318)
Q Consensus 13 ~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~ 68 (318)
.+.....+++++.|+++++||.+++++...+.. |... +.+++|+|++. +
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~----H~~~---V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE----HTKF---VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEECC----CSSC---EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc----ccCc---eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 333344689999999999999887765444432 3333 33356665542 2
Q ss_pred -C------CCcccccccCCCCCccEEEEecCCCcEEEEEccCCcccccccc-----------------------------
Q 021036 69 -S------SKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDC----------------------------- 112 (318)
Q Consensus 69 -~------~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~----------------------------- 112 (318)
. +|...|.+++|+|++++|++++.|++|++||+.++++......
T Consensus 229 ~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~ 308 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 308 (611)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEE
T ss_pred ccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEE
Confidence 1 6889999999999999999999999999999998765432110
Q ss_pred ccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeee-ccccccccc---------
Q 021036 113 KVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSA-EAHCVPFSL--------- 182 (318)
Q Consensus 113 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~--------- 182 (318)
......+....+.+|...|++++| ++++++|++++.|++|++||+.+++....+ ..|...+..
T Consensus 309 ~~~~~~~~~~~~~gh~~~v~~l~~-------spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l 381 (611)
T 1nr0_A 309 VNPELGSIDQVRYGHNKAITALSS-------SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 381 (611)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE
T ss_pred EeCCCCCcceEEcCCCCCEEEEEE-------eCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcE
Confidence 001112345567799999999999 899999999999999999999887654332 111100000
Q ss_pred ----------------------------------------c------------------eeeeeecccceeEEEEeeccC
Q 021036 183 ----------------------------------------L------------------KEVVTVNTVPISVLSLILPVQ 204 (318)
Q Consensus 183 ----------------------------------------~------------------~~~~~~~~~~v~~l~~~~~~~ 204 (318)
. ......+...+.+++|+
T Consensus 382 ~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~s---- 457 (611)
T 1nr0_A 382 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALS---- 457 (611)
T ss_dssp EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEEC----
T ss_pred EEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEe----
Confidence 0 00001134567899999
Q ss_pred CCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecC-CceeeeecCC
Q 021036 205 SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHG-NSLSQVSIPT 283 (318)
Q Consensus 205 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~ 283 (318)
|+|++|++|+.|+.|++|++ .+.....+.. .+|...|++++|+|+|++|++++.|++|++||+.+ +++....
T Consensus 458 -pdg~~lasgs~D~~v~lwd~--~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~--- 530 (611)
T 1nr0_A 458 -NDKQFVAVGGQDSKVHVYKL--SGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN--- 530 (611)
T ss_dssp -TTSCEEEEEETTSEEEEEEE--ETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC---
T ss_pred -CCCCEEEEeCCCCeEEEEEc--cCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeee---
Confidence 99999999999999999955 4444334444 67999999999999999999999999999999986 4332210
Q ss_pred CCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 284 NTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 284 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
....|...|++++|+|||++||+|.
T Consensus 531 ---------~~~~H~~~V~~v~fspdg~~lasgs 555 (611)
T 1nr0_A 531 ---------SWTFHTAKVACVSWSPDNVRLATGS 555 (611)
T ss_dssp ---------CCCCCSSCEEEEEECTTSSEEEEEE
T ss_pred ---------eeeecccceeEEEECCCCCEEEEEE
Confidence 1223778999999999999999974
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-32 Score=251.13 Aligned_cols=247 Identities=12% Similarity=0.162 Sum_probs=192.2
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc--------------------------CC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR--------------------------LS 69 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~--------------------------~~ 69 (318)
+...+++|+.|++|++||+.+++........ .|... +.+++|+|++. +.
T Consensus 70 dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~--~~~~~---v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~ 144 (611)
T 1nr0_A 70 SGYYCASGDVHGNVRIWDTTQTTHILKTTIP--VFSGP---VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 144 (611)
T ss_dssp TSSEEEEEETTSEEEEEESSSTTCCEEEEEE--CSSSC---EEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC
T ss_pred CCcEEEEEeCCCCEEEeECCCCcceeeEeec--ccCCc---eEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceec
Confidence 4566899999999999999765543222211 13333 44477777642 45
Q ss_pred CCcccccccCCCCCcc-EEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc
Q 021036 70 SKKYPVPQNGSSNWFS-ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV 148 (318)
Q Consensus 70 ~~~~~v~~~~~s~~~~-~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 148 (318)
+|..+|.+++|+|++. .|++|+.|++|++||..+ .+....+.+|...|++++| +|+++
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~--------------~~~~~~l~~H~~~V~~v~f-------spdg~ 203 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP--------------FKFKSTFGEHTKFVHSVRY-------NPDGS 203 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT--------------BEEEEEECCCSSCEEEEEE-------CTTSS
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC--------------CeEeeeeccccCceEEEEE-------CCCCC
Confidence 7888999999999986 699999999999999876 4566788999999999999 89999
Q ss_pred EEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccC
Q 021036 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDIS 228 (318)
Q Consensus 149 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 228 (318)
+|++++.|++|++||+.+++....+..... ....|...|.+++|+ |++++|++++.|++|++||+ +
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~-------~~~~h~~~V~~v~~s-----pdg~~l~s~s~D~~v~lWd~--~ 269 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSL-------KNVAHSGSVFGLTWS-----PDGTKIASASADKTIKIWNV--A 269 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTS-------SSCSSSSCEEEEEEC-----TTSSEEEEEETTSEEEEEET--T
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccc-------cccccCCCEEEEEEC-----CCCCEEEEEeCCCeEEEEeC--C
Confidence 999999999999999998887766531100 012466799999999 99999999999999999954 4
Q ss_pred CCeee-----------------------------------------EeeeeecccCceeEEEEcCCCCEEEEecCCCcEE
Q 021036 229 CNKFD-----------------------------------------KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVR 267 (318)
Q Consensus 229 ~~~~~-----------------------------------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~ 267 (318)
+++.. ....+.+|...|++++|+|+|++|++++.|++|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 270 TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp TTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 33311 2234568999999999999999999999999999
Q ss_pred EEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 268 SWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 268 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+||+.++....... .+|...|.+++|++++.++..
T Consensus 350 ~Wd~~~~~~~~~~~-------------~~h~~~v~~~~~s~~~~l~s~ 384 (611)
T 1nr0_A 350 SWDISTGISNRVFP-------------DVHATMITGIKTTSKGDLFTV 384 (611)
T ss_dssp EEETTTCCEEECSS-------------CSCSSCEEEEEECTTSCEEEE
T ss_pred EEECCCCceeeecc-------------cCCcceEEEEEECCCCcEEEE
Confidence 99998876654221 236678999999988765543
No 15
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=234.56 Aligned_cols=203 Identities=20% Similarity=0.250 Sum_probs=172.6
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------CCCCcc
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------LSSKKY 73 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~~~~~~ 73 (318)
..+++++.|++|++||+.+++++..+... ... +.+++|+|++. +..|..
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~~~~~~~~~~----~~~---~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~ 165 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENGKQIKSIDAG----PVD---AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK 165 (321)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECC----TTC---CCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS
T ss_pred CEEEEEeCCCcEEEEECCCCCEEEEEeCC----Ccc---EEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc
Confidence 45789999999999999998776655432 222 23366666543 234566
Q ss_pred cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
.|.+++++|++++|++|+.||.|++||++++ +.+..+.+|..+|.+++| ++++++|++|
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--------------~~~~~~~~h~~~v~~l~~-------spd~~~l~s~ 224 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATG--------------KLLHTLEGHAMPIRSLTF-------SPDSQLLVTA 224 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCCCEEEE-------CTTSCEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------------cEEEEEcccCCceeEEEE-------cCCCCEEEEE
Confidence 7899999999999999999999999999984 466788999999999999 8999999999
Q ss_pred eCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeee
Q 021036 154 SSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFD 233 (318)
Q Consensus 154 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 233 (318)
+.|++|++||+++++....+..|. ..|.+++|+ |++.+|++++.|+.|++| +.++++
T Consensus 225 s~dg~i~iwd~~~~~~~~~~~~h~--------------~~v~~~~~s-----p~~~~l~s~s~D~~v~iw--d~~~~~-- 281 (321)
T 3ow8_A 225 SDDGYIKIYDVQHANLAGTLSGHA--------------SWVLNVAFC-----PDDTHFVSSSSDKSVKVW--DVGTRT-- 281 (321)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCS--------------SCEEEEEEC-----TTSSEEEEEETTSCEEEE--ETTTTE--
T ss_pred cCCCeEEEEECCCcceeEEEcCCC--------------CceEEEEEC-----CCCCEEEEEeCCCcEEEE--eCCCCE--
Confidence 999999999999888777665544 489999999 999999999999999999 566666
Q ss_pred EeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEe
Q 021036 234 KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIF 271 (318)
Q Consensus 234 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 271 (318)
++.++.+|...|.+++|+|++.+|++++.|++|++||.
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 67788899999999999999999999999999999996
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-32 Score=229.94 Aligned_cols=235 Identities=20% Similarity=0.213 Sum_probs=163.9
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSL 98 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 98 (318)
.+++|+.|++|++||+.++.......... . .|..+|.+++|+|++++|++|+.|+.|+|
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~-~--------------------~h~~~v~~v~~sp~~~~las~s~D~~v~i 84 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDE-T--------------------AHKKAIRSVAWRPHTSLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECT-T--------------------CCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEec-C--------------------CccCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 78999999999999998753211100000 1 13334444444444499999999999999
Q ss_pred EEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCc----ceeeeec
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQ----ELQKSAE 174 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~----~~~~~~~ 174 (318)
|+++..... ....+.+..+.+|...|.+++| ++++++|++|+.|++|++||++.. +++..+.
T Consensus 85 w~~~~~~~~-------~~~~~~~~~~~~h~~~V~~v~~-------sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 85 WAKEESADR-------TFEMDLLAIIEGHENEVKGVAW-------SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp EEC--------------CCCEEEEEEC----CEEEEEE-------CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred EEcccCcCc-------cccceeEEEEcCCCCcEEEEEE-------CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 998642100 0013456778899999999999 899999999999999999999532 2233333
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC-
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD- 253 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~- 253 (318)
.|...|.+++|+ |++.+|++|+.|++|++|+ ......+++..+.+|...|.+++|+|+
T Consensus 151 --------------~h~~~v~~v~~~-----p~~~~l~s~s~D~~i~iW~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 151 --------------EHSQDVKHVIWH-----PSEALLASSSYDDTVRIWK--DYDDDWECVAVLNGHEGTVWSSDFDKTE 209 (330)
T ss_dssp --------------CCSSCEEEEEEC-----SSSSEEEEEETTSCEEEEE--EETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred --------------cCCCceEEEEEC-----CCCCEEEEEcCCCeEEEEE--CCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence 355589999999 9999999999999999995 444544577889999999999999998
Q ss_pred -CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCC-CcceeeeEEEEcCCCcEEEEE
Q 021036 254 -GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLP-DAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 254 -~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+.+|++++.|++|++||+..+...... .......+. .|...|++++|++++ +|+++
T Consensus 210 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~------~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~ 267 (330)
T 2hes_X 210 GVFRLCSGSDDSTVRVWKYMGDDEDDQQ------EWVCEAILPDVHKRQVYNVAWGFNG-LIASV 267 (330)
T ss_dssp SSCEEEEEETTSCEEEEEEEEECTTSCE------EEEEEEECCSCCSSCEEEEEECTTS-CEEEE
T ss_pred CeeEEEEEeCCCeEEEEEecCCCccccc------eeEEeeecccccccceEEEEEcCCC-EEEEE
Confidence 678999999999999999754210000 000001122 266799999999876 56655
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.9e-32 Score=228.67 Aligned_cols=237 Identities=21% Similarity=0.268 Sum_probs=189.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------CCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------LSSK 71 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~~~~ 71 (318)
+...+++++.|+.+++|++.+++....+.. |... +.+++|+|++. +.+|
T Consensus 34 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~----h~~~---v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 106 (312)
T 4ery_A 34 NGEWLASSSADKLIKIWGAYDGKFEKTISG----HKLG---ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 106 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECC----CSSC---EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEeeCCCeEEEEeCCCcccchhhcc----CCCc---eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCC
Confidence 445689999999999999988876554432 3332 33466666542 3467
Q ss_pred cccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE
Q 021036 72 KYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV 151 (318)
Q Consensus 72 ~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~ 151 (318)
...|.++.+++++++|++|+.||.|++||+++++ .+..+..|..+|.+++| ++++++|+
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~-------~~~~~~l~ 165 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK--------------CLKTLPAHSDPVSAVHF-------NRDGSLIV 165 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEE-------CTTSSEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE--------------EEEEecCCCCcEEEEEE-------cCCCCEEE
Confidence 8889999999999999999999999999998743 56778899999999999 89999999
Q ss_pred EEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCe
Q 021036 152 TGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNK 231 (318)
Q Consensus 152 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 231 (318)
+++.|+.|++||+++++....+... +..++..++|+ |++++|++++.||.|++| |.++++
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~-------------~~~~~~~~~~~-----~~~~~l~~~~~d~~i~iw--d~~~~~ 225 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDD-------------DNPPVSFVKFS-----PNGKYILAATLDNTLKLW--DYSKGK 225 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCS-------------SCCCEEEEEEC-----TTSSEEEEEETTTEEEEE--ETTTTE
T ss_pred EEeCCCcEEEEECCCCceeeEEecc-------------CCCceEEEEEC-----CCCCEEEEEcCCCeEEEE--ECCCCc
Confidence 9999999999999988776654322 23478899999 999999999999999999 566665
Q ss_pred eeEeeeeecccCceeE--EEEc-CCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcC
Q 021036 232 FDKVGSYNAHDQVVTG--LAWA-FDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP 308 (318)
Q Consensus 232 ~~~~~~~~~h~~~v~~--~~~~-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 308 (318)
.+..+.+|...+.+ ..++ +++.+|++|+.||.|++||+.++.... .+.+|...|.+++|+|
T Consensus 226 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--------------~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 226 --CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ--------------KLQGHTDVVISTACHP 289 (312)
T ss_dssp --EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE--------------EECCCSSCEEEEEECS
T ss_pred --EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh--------------hhhccCCcEEEEeecC
Confidence 56677777654433 2344 578899999999999999998876543 2334667999999999
Q ss_pred CCcEEEEE
Q 021036 309 GNLVVAMV 316 (318)
Q Consensus 309 ~~~~l~~~ 316 (318)
++.+|+++
T Consensus 290 ~~~~l~s~ 297 (312)
T 4ery_A 290 TENIIASA 297 (312)
T ss_dssp SSSEEEEE
T ss_pred cCCceEEE
Confidence 99999987
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=233.70 Aligned_cols=180 Identities=20% Similarity=0.236 Sum_probs=141.9
Q ss_pred EEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECC
Q 021036 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGY 165 (318)
Q Consensus 86 ~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~ 165 (318)
.|++|+.||+|+|||+++++.. ......+.+|.+.|++++| ++++++|++|+.|++|++||++
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~----------~~~~~~~~~H~~~V~~v~~-------spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETL----------IVSKFCKYEHDDIVSTVSV-------LSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSC----------EEEEEEEECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETT
T ss_pred eEEEEECCCEEEEEeccCCCce----------eEeeccccCCCCCEEEEEE-------CCCCCEEEEEeCCCeEEEEECC
Confidence 6789999999999999987643 2233445689999999999 8999999999999999999999
Q ss_pred CcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCc
Q 021036 166 IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQV 244 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~ 244 (318)
+++++..+..|. ..|++++|+ +++ .+|++|+.|++|++| |.++++.........|...
T Consensus 158 ~~~~~~~~~~h~--------------~~V~~~~~~-----~~~~~~l~s~s~D~~v~iw--d~~~~~~~~~~~~~~~~~~ 216 (344)
T 4gqb_B 158 QQVVLSSYRAHA--------------AQVTCVAAS-----PHKDSVFLSCSEDNRILLW--DTRCPKPASQIGCSAPGYL 216 (344)
T ss_dssp TTEEEEEECCCS--------------SCEEEEEEC-----SSCTTEEEEEETTSCEEEE--ETTSSSCEEECC----CCC
T ss_pred CCcEEEEEcCcC--------------CceEEEEec-----CCCCCceeeeccccccccc--cccccceeeeeecceeecc
Confidence 998888776554 489999999 776 588999999999999 5566552222223456678
Q ss_pred eeEEEEcCC-CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCC-cEEEEEe
Q 021036 245 VTGLAWAFD-GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGN-LVVAMVQ 317 (318)
Q Consensus 245 v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~~~~ 317 (318)
+.+++|+|+ +.+|++|+.|++|++||+++++... .+.+|...|++++|+|++ ++||+|.
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~--------------~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL--------------SSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE--------------EEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE--------------EEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 999999995 5689999999999999998765442 223466699999999998 5788874
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.3e-32 Score=226.40 Aligned_cols=207 Identities=17% Similarity=0.188 Sum_probs=167.8
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 147 (318)
+.+|..+|.+++|+|++++|++|+.||.|++||++++ ..++.+..|..+|.+++| ++++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--------------~~~~~~~~~~~~v~~~~~-------~~~~ 67 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--------------VEVRSIQVTETPVRAGKF-------IARK 67 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------------EEEEEEECCSSCEEEEEE-------EGGG
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--------------ceeEEeeccCCcEEEEEE-------eCCC
Confidence 4456677777777777899999999999999999984 466788899999999999 8899
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
++|++|+.|++|++||+.+++.+..+..|. ..|.+++|+ |++.+|++|+.|++|++||+
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~-----~~~~~l~sgs~D~~v~lWd~-- 126 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHP--------------DYIRSIAVH-----PTKPYVLSGSDDLTVKLWNW-- 126 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCS--------------SCEEEEEEC-----SSSSEEEEEETTSCEEEEEG--
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCC--------------CcEEEEEEc-----CCCCEEEEECCCCeEEEEEC--
Confidence 999999999999999999998877776554 489999999 99999999999999999954
Q ss_pred CCCeeeEeeeeecccCceeEEEEcC-CCCEEEEecCCCcEEEEEecCCcee------------eeecC--CCCCCcc-cc
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAF-DGCCLYSCSQDNFVRSWIFHGNSLS------------QVSIP--TNTPGLQ-SC 291 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~------------~~~~~--~~~~~~~-~~ 291 (318)
+++. .....+.+|...|.+++|+| ++.+|++|+.|++|++||++..... .+... +....++ ++
T Consensus 127 ~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s 205 (304)
T 2ynn_A 127 ENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (304)
T ss_dssp GGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE
T ss_pred CCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc
Confidence 4432 24567889999999999999 6789999999999999998653321 11111 2233343 22
Q ss_pred cc----------------CCCcceeeeEEEEcCCCcEEEEEe
Q 021036 292 TD----------------LPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 292 ~~----------------~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+ +.+|...|.+++|+|++++|++|.
T Consensus 206 ~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS 247 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEc
Confidence 22 348999999999999999999984
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.7e-31 Score=222.78 Aligned_cols=230 Identities=16% Similarity=0.237 Sum_probs=172.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++++.|++|++||+.+++.+..+.. |... +.+++|+|++ ++|++|+.|+.
T Consensus 76 dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~----h~~~---v~~~~~~~~~------------------~~l~s~s~D~~ 130 (319)
T 3frx_A 76 DGAYALSASWDKTLRLWDVATGETYQRFVG----HKSD---VMSVDIDKKA------------------SMIISGSRDKT 130 (319)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSC---EEEEEECTTS------------------CEEEEEETTSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCeeEEEcc----CCCc---EEEEEEcCCC------------------CEEEEEeCCCe
Confidence 455689999999999999998876444332 3332 3335555555 99999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
|++||++. +.+..+.+|...|.++.|.|.... ..++..|++++.|+.|++||+++++....+..
T Consensus 131 i~vwd~~~---------------~~~~~~~~h~~~v~~~~~~~~~~~-~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 194 (319)
T 3frx_A 131 IKVWTIKG---------------QCLATLLGHNDWVSQVRVVPNEKA-DDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194 (319)
T ss_dssp EEEEETTS---------------CEEEEECCCSSCEEEEEECCC-------CCEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEECCC---------------CeEEEEeccCCcEEEEEEccCCCC-CCCccEEEEEeCCCEEEEEECCcchhheeecC
Confidence 99999974 355678899999999999443321 23556899999999999999998877666554
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC 255 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 255 (318)
| ...|.+++|+ |++++|++|+.||.|++| |.++.+ .+..+.. ...|.+++|+|++.
T Consensus 195 h--------------~~~v~~~~~s-----p~g~~l~s~~~dg~i~iw--d~~~~~--~~~~~~~-~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 195 H--------------NSNINTLTAS-----PDGTLIASAGKDGEIMLW--NLAAKK--AMYTLSA-QDEVFSLAFSPNRY 250 (319)
T ss_dssp C--------------CSCEEEEEEC-----TTSSEEEEEETTCEEEEE--ETTTTE--EEEEEEC-CSCEEEEEECSSSS
T ss_pred C--------------CCcEEEEEEc-----CCCCEEEEEeCCCeEEEE--ECCCCc--EEEEecC-CCcEEEEEEcCCCC
Confidence 4 4489999999 999999999999999999 566665 5556654 46899999999999
Q ss_pred EEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 256 CLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 256 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+|++++.+ .+++|++..+........... .....|...+.+++|+|||++|++|.
T Consensus 251 ~la~~~~~-~i~v~~~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 251 WLAAATAT-GIKVFSLDPQYLVDDLRPEFA------GYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EEEEEETT-EEEEEEETTEEEEEEECCCCT------TCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCC-CcEEEEeCcCeeeeccCcccc------ccccCcCcceeEEEECCCCCEEEEee
Confidence 99888754 599999987654432211110 01123456789999999999999984
No 21
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-32 Score=231.31 Aligned_cols=235 Identities=20% Similarity=0.221 Sum_probs=168.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++||+.+++....... .+|... +.+++|+|.. ++++|++|+.|++
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l--~gH~~~---V~~v~~~~~~----------------~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADL--RGHEGP---VWQVAWAHPM----------------YGNILASCSYDRK 82 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEE--ECCSSC---EEEEEECCGG----------------GSSCEEEEETTSC
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEE--cCCCcc---EEEEEeCCCC----------------CCCEEEEEECCCE
Confidence 456689999999999999987642111111 113333 3335554320 2589999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC--CcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP--QVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|++||+++++ ......+.+|...|++++| +++ +.+|++|+.|++|++||++.+......
T Consensus 83 v~iWd~~~~~------------~~~~~~~~~h~~~V~~v~~-------~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 83 VIIWREENGT------------WEKSHEHAGHDSSVNSVCW-------APHDYGLILACGSSDGAISLLTYTGEGQWEVK 143 (316)
T ss_dssp EEEECCSSSC------------CCEEEEECCCSSCCCEEEE-------CCTTTCSCEEEECSSSCEEEEEECSSSCEEEC
T ss_pred EEEEECCCCc------------ceEEEEccCCCCceEEEEE-------CCCCCCcEEEEEcCCCCEEEEecCCCCCccee
Confidence 9999998754 2345677899999999999 665 789999999999999999875322111
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCC-----------------ceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-----------------LMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-----------------~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
. ....|...+.+++|+ |+ +.+|++|+.|+.|++|+++. ...++++.
T Consensus 144 ~-----------~~~~h~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~-~~~~~~~~ 206 (316)
T 3bg1_A 144 K-----------INNAHTIGCNAVSWA-----PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE-DGQWKEEQ 206 (316)
T ss_dssp C-----------BTTSSSSCBCCCEEC-----CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT-TSCEEEEE
T ss_pred e-----------eeccccCCcceEEEc-----cccCCccccccccccCccccceEEEecCCCeEEEEEeCC-CCccceee
Confidence 0 012344578888888 54 47899999999999996532 22334677
Q ss_pred eeecccCceeEEEEcCCC----CEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcE
Q 021036 237 SYNAHDQVVTGLAWAFDG----CCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLV 312 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~----~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 312 (318)
.+.+|...|.+++|+|++ .+|++++.|++|++|++.+........ ..+..|...|.+++|+|++++
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~----------~~~~~~~~~v~~v~~sp~g~~ 276 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP----------KLLHKFNDVVWHVSWSITANI 276 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBC----------CEEEECSSCEEEEEECTTTCC
T ss_pred ecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhh----------hhhhcCCCcEEEEEEcCCCCE
Confidence 888999999999999986 789999999999999987631100000 001124568999999999999
Q ss_pred EEEEe
Q 021036 313 VAMVQ 317 (318)
Q Consensus 313 l~~~~ 317 (318)
||++.
T Consensus 277 las~~ 281 (316)
T 3bg1_A 277 LAVSG 281 (316)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99874
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-31 Score=243.20 Aligned_cols=232 Identities=21% Similarity=0.302 Sum_probs=184.5
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccc-------------------c----CCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVL-------------------R----LSSKK 72 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~-------------------~----~~~~~ 72 (318)
+...+++++.|+++++||+..... ..+.. +... +.+++|+|++ . +..|.
T Consensus 314 ~~~~l~t~~~d~~i~~w~~~~~~~-~~~~~----~~~~---v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~ 385 (577)
T 2ymu_A 314 DGQTIASASDDKTVKLWNRNGQHL-QTLTG----HSSS---VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS 385 (577)
T ss_dssp TSSEEEEEETTSCEEEEETTSCEE-EEECC----CSSC---EEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCS
T ss_pred CCCEEEEEeCCCeEEEEeCCCCee-EEEeC----CCCC---EEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCC
Confidence 445689999999999999865432 22211 1111 2223333332 1 44688
Q ss_pred ccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE
Q 021036 73 YPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 73 ~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
.+|.++++++++++|++++.|+.|++|+.. .+.+..+.+|...|++++| ++++++|++
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~---------------~~~~~~~~~~~~~v~~~~~-------s~d~~~l~~ 443 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNRN---------------GQLLQTLTGHSSSVWGVAF-------SPDDQTIAS 443 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTT---------------CCEEEEEECCSSCEEEEEE-------CTTSSEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCC---------------CCEEEEecCCCCCeEEEEE-------CCCCCEEEE
Confidence 899999999999999999999999999964 3466778899999999999 899999999
Q ss_pred EeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCee
Q 021036 153 GSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKF 232 (318)
Q Consensus 153 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 232 (318)
++.|++|++||.. ++.+..+.. |...|.+++|+ |++++|++++.|+.|++|+ . +++
T Consensus 444 ~~~d~~v~~w~~~-~~~~~~~~~--------------~~~~v~~~~~s-----pd~~~las~~~d~~i~iw~--~-~~~- 499 (577)
T 2ymu_A 444 ASDDKTVKLWNRN-GQLLQTLTG--------------HSSSVRGVAFS-----PDGQTIASASDDKTVKLWN--R-NGQ- 499 (577)
T ss_dssp EETTSEEEEEETT-SCEEEEEEC--------------CSSCEEEEEEC-----TTSCEEEEEETTSEEEEEE--T-TSC-
T ss_pred EcCCCEEEEEECC-CCEEEEEcC--------------CCCCEEEEEEc-----CCCCEEEEEeCCCEEEEEc--C-CCC-
Confidence 9999999999964 455554443 44589999999 9999999999999999995 3 334
Q ss_pred eEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcE
Q 021036 233 DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLV 312 (318)
Q Consensus 233 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 312 (318)
.+..+.+|...|++++|+|+|++|++++.|+.|++||.....+..+ .+|.+.|++++|+|||++
T Consensus 500 -~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~---------------~~h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 500 -LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL---------------TGHSSSVWGVAFSPDGQT 563 (577)
T ss_dssp -EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEE---------------ECCSSCEEEEEECTTSSC
T ss_pred -EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEE---------------cCCCCCEEEEEEcCCCCE
Confidence 6678899999999999999999999999999999999754444333 346679999999999999
Q ss_pred EEEEe
Q 021036 313 VAMVQ 317 (318)
Q Consensus 313 l~~~~ 317 (318)
|+++.
T Consensus 564 l~s~~ 568 (577)
T 2ymu_A 564 IASAS 568 (577)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-31 Score=247.30 Aligned_cols=231 Identities=18% Similarity=0.174 Sum_probs=181.5
Q ss_pred cCCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEe
Q 021036 11 KMKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVG 90 (318)
Q Consensus 11 ~~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g 90 (318)
.+.+.+...+++||.|++|++||+.+......... ..+.+|...|.++++++++++|++|
T Consensus 389 ~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~--------------------~~~~~h~~~v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 389 ATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ--------------------RRLTGHSHFVEDVVLSSDGQFALSG 448 (694)
T ss_dssp ECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEE--------------------EEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EecCCCCCEEEEEeCCCcEEEEEccCCCccccccc--------------------ceecCCCCcEEEEEECCCCCEEEEE
Confidence 34445567799999999999999987543221111 1234566666677777777999999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCccee
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
+.||.|+|||+.++ +..+.+.+|...|.+++| ++++++|++|+.|++|++||.......
T Consensus 449 s~Dg~v~vwd~~~~--------------~~~~~~~~h~~~v~~~~~-------s~~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 449 SWDGELRLWDLAAG--------------VSTRRFVGHTKDVLSVAF-------SLDNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp ETTSEEEEEETTTT--------------EEEEEEECCSSCEEEEEE-------CTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred eCCCcEEEEECCCC--------------cceeEEeCCCCCEEEEEE-------eCCCCEEEEEeCCCEEEEEECCCCcce
Confidence 99999999999884 456778899999999999 899999999999999999998654332
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCc--eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEE
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL--MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGL 248 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~--~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 248 (318)
...... ..|...|.+++|+ |++ ..+++|+.|+.|++| |++..+ ....+.+|...|+++
T Consensus 508 ~~~~~~-----------~~h~~~v~~~~~~-----~~~~~~~l~s~s~d~~v~vw--d~~~~~--~~~~~~~h~~~v~~v 567 (694)
T 3dm0_A 508 TISEGG-----------EGHRDWVSCVRFS-----PNTLQPTIVSASWDKTVKVW--NLSNCK--LRSTLAGHTGYVSTV 567 (694)
T ss_dssp EECSST-----------TSCSSCEEEEEEC-----SCSSSCEEEEEETTSCEEEE--ETTTCC--EEEEECCCSSCEEEE
T ss_pred eeccCC-----------CCCCCcEEEEEEe-----CCCCcceEEEEeCCCeEEEE--ECCCCc--EEEEEcCCCCCEEEE
Confidence 221111 2355689999999 775 689999999999999 555655 567788999999999
Q ss_pred EEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 249 AWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 249 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+|+|++++|++++.|++|++||++++....... +...|.+++|+|++.+|+++.
T Consensus 568 ~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~---------------~~~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 568 AVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE---------------ANSVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp EECTTSSEEEEEETTSBCEEEETTTTEEEECCB---------------CSSCEEEEEECSSSSEEEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCceEEEec---------------CCCcEEEEEEcCCCcEEEEEc
Confidence 999999999999999999999998876543221 123789999999999998764
No 24
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-32 Score=233.71 Aligned_cols=230 Identities=11% Similarity=0.031 Sum_probs=167.1
Q ss_pred CccceEEeeCCCceeEeecCCC--CCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSN--CCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS 93 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d 93 (318)
+...+++++.|+.+++||+.++ +.+..+.. |... +.+++|+|++ ++|++++.|
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----h~~~---v~~~~~s~~~------------------~~l~s~s~d 76 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSD----HDKI---VTCVDWAPKS------------------NRIVTCSQD 76 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCC----CSSC---EEEEEECTTT------------------CCEEEEETT
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEec----CCce---EEEEEEeCCC------------------CEEEEEeCC
Confidence 4556889999999999999876 33333221 2222 3335555555 999999999
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce---e
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL---Q 170 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~ 170 (318)
|.|++||+.+++. ......+.+|...|.+++| ++++++|++++.|+.|++||++.++. .
T Consensus 77 ~~v~vwd~~~~~~-----------~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 138 (377)
T 3dwl_C 77 RNAYVYEKRPDGT-----------WKQTLVLLRLNRAATFVRW-------SPNEDKFAVGSGARVISVCYFEQENDWWVS 138 (377)
T ss_dssp SSEEEC------C-----------CCCEEECCCCSSCEEEEEC-------CTTSSCCEEEESSSCEEECCC-----CCCC
T ss_pred CeEEEEEcCCCCc-----------eeeeeEecccCCceEEEEE-------CCCCCEEEEEecCCeEEEEEECCcccceee
Confidence 9999999987541 1245567789999999999 88999999999999999999998763 3
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC--------------CeeeEee
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC--------------NKFDKVG 236 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~--------------~~~~~~~ 236 (318)
..+.. .|...|.+++|+ |++++|++++.|+.|++|+++... ...+.+.
T Consensus 139 ~~~~~-------------~h~~~v~~~~~~-----~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T 3dwl_C 139 KHLKR-------------PLRSTILSLDWH-----PNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA 200 (377)
T ss_dssp EEECS-------------SCCSCEEEEEEC-----TTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE
T ss_pred eEeec-------------ccCCCeEEEEEc-----CCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhh
Confidence 33332 245689999999 999999999999999999763211 1123555
Q ss_pred eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.+ +|...|.+++|+|++++|++++.|+.|++||+.++....... ..+.+|...|.+++|+|++++|+++
T Consensus 201 ~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 201 EY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL----------ITVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp CC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC----------CCEECSSSCEEEEEEEETTEEEEEE
T ss_pred cc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee----------EeecCCCCceEEEEEcCCCCEEEEE
Confidence 66 899999999999999999999999999999998876421000 1233466789999999999999987
Q ss_pred e
Q 021036 317 Q 317 (318)
Q Consensus 317 ~ 317 (318)
.
T Consensus 270 ~ 270 (377)
T 3dwl_C 270 Y 270 (377)
T ss_dssp S
T ss_pred c
Confidence 4
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-31 Score=225.04 Aligned_cols=213 Identities=17% Similarity=0.188 Sum_probs=167.8
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhcccccccc---------------ceeeeecccc-----cCCCCcccc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLH---------------SLAVAWSPVL-----RLSSKKYPV 75 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~w~p~~-----~~~~~~~~v 75 (318)
+...+++++.|+.+++||+.+.+........-.+|...+.. .....|+... .+.+|..+|
T Consensus 108 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence 34568999999999999998764322221111122222111 1123344321 255789999
Q ss_pred cccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC
Q 021036 76 PQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS 155 (318)
Q Consensus 76 ~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~ 155 (318)
.++++++++++|++|+.||.|++||+.++. ....+.+|...|++++| +|++++|++|+.
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~-------~p~~~~l~s~s~ 246 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDASAKLWDVREGM--------------CRQTFTGHESDINAICF-------FPNGNAFATGSD 246 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCS--------------EEEEECCCSSCEEEEEE-------CTTSSEEEEEET
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCe--------------eEEEEcCCcCCEEEEEE-------cCCCCEEEEEcC
Confidence 999999999999999999999999998854 56778899999999999 899999999999
Q ss_pred CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe
Q 021036 156 DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 156 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 235 (318)
|++|++||+++++....+.... +...|.+++|+ |++.+|++|+.||.|++| +....+ .+
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~------------~~~~v~~~~~s-----~~g~~l~~g~~d~~i~vw--d~~~~~--~~ 305 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDN------------IICGITSVSFS-----KSGRLLLAGYDDFNCNVW--DALKAD--RA 305 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTT------------CCSCEEEEEEC-----TTSSEEEEEETTSEEEEE--ETTTCC--EE
T ss_pred CCcEEEEECCCCcEEEEEccCC------------cccceEEEEEC-----CCCCEEEEECCCCeEEEE--EcccCc--Ee
Confidence 9999999999887665543211 12368999999 999999999999999999 555555 66
Q ss_pred eeeecccCceeEEEEcCCCCEEEEecCCCcEEEEE
Q 021036 236 GSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWI 270 (318)
Q Consensus 236 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 270 (318)
..+.+|...|.+++|+|+|.+|++|+.|++|++||
T Consensus 306 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 78899999999999999999999999999999996
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-31 Score=227.62 Aligned_cols=244 Identities=18% Similarity=0.201 Sum_probs=172.6
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSL 98 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 98 (318)
.+++| .++++++|++.+++.+..+........... . +. ......+...|.+++|++++++|++|+.||.|++
T Consensus 78 ~la~g-~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~-~---~~---~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~i 149 (393)
T 1erj_A 78 YLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPE-N---LN---TSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRI 149 (393)
T ss_dssp EEEEE-CBSCEEEEETTTCCEEEEECC------------------------CCCCBEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEE-cCCcEEEEEecCCCEEEEecCccccccccc-c---cc---ccccCCCceeEEEEEECCCCCEEEEEcCCCeEEE
Confidence 34554 578999999998876555433211000000 0 00 0001112234666666777799999999999999
Q ss_pred EEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeeccccc
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCV 178 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 178 (318)
||++++ +.+..+.+|...|.+++| ++++++|++++.|++|++||+++++....+..
T Consensus 150 wd~~~~--------------~~~~~~~~h~~~v~~~~~-------~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--- 205 (393)
T 1erj_A 150 WDIENR--------------KIVMILQGHEQDIYSLDY-------FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--- 205 (393)
T ss_dssp EETTTT--------------EEEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSEEEEEETTTTEEEEEEEC---
T ss_pred EECCCC--------------cEEEEEccCCCCEEEEEE-------cCCCCEEEEecCCCcEEEEECCCCeeEEEEEc---
Confidence 999874 466778999999999999 89999999999999999999999877665542
Q ss_pred ccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeeeccCCCeeeEeeee-------ecccCceeEEEE
Q 021036 179 PFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY-------NAHDQVVTGLAW 250 (318)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-------~~h~~~v~~~~~ 250 (318)
...+.+++++ | ++.+|++|+.|+.|++| |.+++. .+..+ .+|...|++++|
T Consensus 206 ------------~~~v~~~~~~-----~~~~~~l~~~s~d~~v~iw--d~~~~~--~~~~~~~~~~~~~~h~~~v~~v~~ 264 (393)
T 1erj_A 206 ------------EDGVTTVAVS-----PGDGKYIAAGSLDRAVRVW--DSETGF--LVERLDSENESGTGHKDSVYSVVF 264 (393)
T ss_dssp ------------SSCEEEEEEC-----STTCCEEEEEETTSCEEEE--ETTTCC--EEEEEC------CCCSSCEEEEEE
T ss_pred ------------CCCcEEEEEE-----CCCCCEEEEEcCCCcEEEE--ECCCCc--EEEeecccccCCCCCCCCEEEEEE
Confidence 2368899998 6 89999999999999999 555554 33333 578999999999
Q ss_pred cCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 251 AFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 251 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+|+|++|++++.|++|++||+++.........+... .....+.+|...|.+++|+|++++|++|.
T Consensus 265 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 265 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG--TCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp CTTSSEEEEEETTSEEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC--cceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 999999999999999999999764332111000000 01123446888999999999999999874
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-31 Score=224.86 Aligned_cols=200 Identities=18% Similarity=0.175 Sum_probs=158.4
Q ss_pred CCCCcc-cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC
Q 021036 68 LSSKKY-PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 68 ~~~~~~-~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 146 (318)
+.+|.. .|.+++|+|++++|++|+.|+.|+||+++++... .......+|...|.+++| +++
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----------~~~~~~~~h~~~v~~~~~-------sp~ 72 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----------CKSVLSEGHQRTVRKVAW-------SPC 72 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----------EEEEECSSCSSCEEEEEE-------CTT
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----------eeeeeccccCCcEEEEEE-------CCC
Confidence 334544 5666666666699999999999999999875421 112234689999999999 899
Q ss_pred CcEEEEEeCCCcEEEEECCCcc--eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEee
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWK 224 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~ 224 (318)
+++|++|+.|+++++||+..+. +...+. +|...|.+++|+ |++++|++|+.|+.|++|+
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~--------------~h~~~v~~v~~s-----p~~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLE--------------GHENEVKSVAWA-----PSGNLLATCSRDKSVWVWE 133 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEEC--------------CCSSCEEEEEEC-----TTSSEEEEEETTSCEEEEE
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEcc--------------CCCCCceEEEEe-----CCCCEEEEEECCCeEEEEE
Confidence 9999999999999999988663 333343 345589999999 9999999999999999996
Q ss_pred eccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEE
Q 021036 225 CDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGM 304 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 304 (318)
++... ....+..+.+|...|.+++|+|++.+|++++.|++|++||+..+...... .+.+|...|+++
T Consensus 134 ~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~------------~~~~h~~~v~~l 200 (345)
T 3fm0_A 134 VDEED-EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCA------------TLEGHESTVWSL 200 (345)
T ss_dssp ECTTS-CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEE------------EECCCSSCEEEE
T ss_pred CCCCC-CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEE------------EecCCCCceEEE
Confidence 54322 23356678889999999999999999999999999999999876533211 233467799999
Q ss_pred EEcCCCcEEEEEe
Q 021036 305 AVSPGNLVVAMVQ 317 (318)
Q Consensus 305 ~~sp~~~~l~~~~ 317 (318)
+|+|+|++|++|.
T Consensus 201 ~~sp~g~~l~s~s 213 (345)
T 3fm0_A 201 AFDPSGQRLASCS 213 (345)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCEEEEEe
Confidence 9999999999974
No 28
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-31 Score=233.84 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=153.0
Q ss_pred ccCcCCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEE
Q 021036 8 TSNKMKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSIL 87 (318)
Q Consensus 8 ~~~~~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l 87 (318)
++.++.+.+...+++|+.||+|++||+.+++....+.. .+|.+. +.+++|+|.. +++|
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~--~gH~~~---V~~l~f~p~~-----------------~~~l 180 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG--IGAGGS---ITGLKFNPLN-----------------TNQF 180 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC--CSSSCC---CCEEEECSSC-----------------TTEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc--cCCCCC---EEEEEEeCCC-----------------CCEE
Confidence 34455566677899999999999999988765333322 124443 3346666543 5899
Q ss_pred EEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCc
Q 021036 88 AVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQ 167 (318)
Q Consensus 88 ~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 167 (318)
++|+.||+|++||++++. .........+...+.+++| ++++.+|++|+.||.|++||++.
T Consensus 181 ~s~s~D~~v~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~g~~dg~i~~wd~~~- 240 (435)
T 4e54_B 181 YASSMEGTTRLQDFKGNI------------LRVFASSDTINIWFCSLDV-------SASSRMVVTGDNVGNVILLNMDG- 240 (435)
T ss_dssp EEECSSSCEEEEETTSCE------------EEEEECCSSCSCCCCCEEE-------ETTTTEEEEECSSSBEEEEESSS-
T ss_pred EEEeCCCEEEEeeccCCc------------eeEEeccCCCCccEEEEEE-------CCCCCEEEEEeCCCcEeeeccCc-
Confidence 999999999999998643 1222222334556889999 89999999999999999999864
Q ss_pred ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCee-eEeeeeecccCce
Q 021036 168 ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNKF-DKVGSYNAHDQVV 245 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~~h~~~v 245 (318)
+.+..+.. |...|.+++|+ |++. +|++|+.|+.|++||+ +..+. ..+....+|...|
T Consensus 241 ~~~~~~~~--------------h~~~v~~v~~~-----p~~~~~~~s~s~d~~v~iwd~--~~~~~~~~~~~~~~h~~~v 299 (435)
T 4e54_B 241 KELWNLRM--------------HKKKVTHVALN-----PCCDWFLATASVDQTVKIWDL--RQVRGKASFLYSLPHRHPV 299 (435)
T ss_dssp CBCCCSBC--------------CSSCEEEEEEC-----TTCSSEEEEEETTSBCCEEET--TTCCSSSCCSBCCBCSSCE
T ss_pred ceeEEEec--------------ccceEEeeeec-----CCCceEEEEecCcceeeEEec--ccccccceEEEeeeccccc
Confidence 34444443 45589999999 7765 8889999999999954 33321 1223346799999
Q ss_pred eEEEEcCCCCEEEEecCCCcEEEEEecCCc
Q 021036 246 TGLAWAFDGCCLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 246 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 275 (318)
++++|+|+|.+|++++.|++|++||+.++.
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 999999999999999999999999998644
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.2e-31 Score=219.63 Aligned_cols=200 Identities=17% Similarity=0.182 Sum_probs=157.8
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC--
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-- 145 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-- 145 (318)
+.+|...|.+++|+++|++|++|+.|++|+||++..+. .+.+..+.+|.++|++++| ++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~------------~~~~~~l~gH~~~V~~v~~-------s~~~ 65 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGPVWRVDW-------AHPK 65 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC------------BCCCEEECCCSSCEEEEEE-------CCGG
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC------------cEEEEEEccccCCeEEEEe-------cCCC
Confidence 45678888888888888999999999999999997533 3456788999999999999 54
Q ss_pred CCcEEEEEeCCCcEEEEECCCcc--eeeeecccccccccceeeeeecccceeEEEEeeccCCCC--ceEEEEEeCCCcEE
Q 021036 146 PQVLLVTGSSDGSVRIWDGYIQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR--LMLLAVGKGSGSFD 221 (318)
Q Consensus 146 ~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~--~~~l~~~~~dg~i~ 221 (318)
++++|++|+.|++|++||+++++ ....+. .|...|.+++|+ |+ +.+|++++.|+.|+
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~--------------~h~~~v~~v~~~-----p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHA--------------VHSASVNSVQWA-----PHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEEC--------------CCSSCEEEEEEC-----CGGGCSEEEEEETTSEEE
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEee--------------cCCCceeEEEeC-----cCCCCcEEEEEECCCcEE
Confidence 37899999999999999998764 222222 345589999999 76 78999999999999
Q ss_pred EeeeccCCCeeeEeeeeecccCceeEEEEcCC-------------CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCc
Q 021036 222 LWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD-------------GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGL 288 (318)
Q Consensus 222 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-------------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 288 (318)
+|+++ .........+.+|...|.+++|+|+ +++|++|+.|++|++||++++......
T Consensus 127 ~wd~~--~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~-------- 196 (297)
T 2pm7_B 127 VVEFK--ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL-------- 196 (297)
T ss_dssp EEEBC--SSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE--------
T ss_pred EEEec--CCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE--------
Confidence 99654 3321123457789999999999997 569999999999999999875421100
Q ss_pred cccccCCCcceeeeEEEEcCCC---cEEEEEe
Q 021036 289 QSCTDLPDAFVSCLGMAVSPGN---LVVAMVQ 317 (318)
Q Consensus 289 ~~~~~~~~h~~~v~~v~~sp~~---~~l~~~~ 317 (318)
...+.+|...|.+++|+|++ .+||++.
T Consensus 197 --~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 197 --ESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp --EEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred --EEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 01334577899999999984 8899874
No 30
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-32 Score=239.98 Aligned_cols=245 Identities=13% Similarity=0.051 Sum_probs=177.1
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++++.|++|++||+.++++...... . .. .|...+.+|..+|++++|+++ ..|++|+.||+|
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~-~--~~-----------~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV 289 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFK-M--CE-----------KPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFV 289 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEE-C--CC-----------SCSEEECCTTTCEEEEEESSS-SEEEEEETTSEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccce-e--ec-----------CceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEE
Confidence 35689999999999999987754311000 0 00 011123455566667776654 489999999999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEE--EeeeecCCCCCCC-cEEEEEeCCCcEEEEECCCcceeeee
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSI--SLAVLSSDSSNPQ-VLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
++||+++++. +...+.+|...|+++ .| ++++ .+|+||+.|++|+|||++++++...+
T Consensus 290 ~lWD~~~~~~-------------~~~~~~~H~~~V~sv~~~~-------s~~g~~~laS~S~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 290 AEFDLTDPEV-------------PSFYDQVHDSYILSVSTAY-------SDFEDTVVSTVAVDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp EEEETTBCSS-------------CSEEEECSSSCEEEEEEEC-------CTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred EEEECCCCCC-------------ceEEeecccccEEEEEEEc-------CCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence 9999987532 334578999999999 56 7777 89999999999999999988766555
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 253 (318)
..+.. ...|.+++|+ |++..|++++.|++|++| +.+... .+..+.+|.+.|++++|+|+
T Consensus 350 ~~~~~------------~~~v~~v~fs-----p~~~~l~s~~~d~tv~lw--d~~~~~--~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 350 VSRFR------------GSNLVPVVYC-----PQIYSYIYSDGASSLRAV--PSRAAF--AVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp EEECS------------CCSCCCEEEE-----TTTTEEEEECSSSEEEEE--ETTCTT--CCEEEEECSSCEEEEECCSS
T ss_pred ccccc------------cCcccceEeC-----CCcCeEEEeCCCCcEEEE--ECcccc--cceeeecCCCceEEEEeCCC
Confidence 43321 1247889999 999999999999999999 556655 45667889999999999999
Q ss_pred CCEEEEecCCCcEEEEEecCCcee---------------eeecCCCCCCcc---------------ccccCCCcceeeeE
Q 021036 254 GCCLYSCSQDNFVRSWIFHGNSLS---------------QVSIPTNTPGLQ---------------SCTDLPDAFVSCLG 303 (318)
Q Consensus 254 ~~~l~s~~~d~~v~iwd~~~~~~~---------------~~~~~~~~~~~~---------------~~~~~~~h~~~v~~ 303 (318)
|++|++|+.|++|++||+..+... .+.+.+.+..+. ....+.+|...|.+
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~ 488 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITC 488 (524)
T ss_dssp CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCC
T ss_pred CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEE
Confidence 999999999999999997543211 222333322110 11235589999999
Q ss_pred EEEcCCCc---EEEEEe
Q 021036 304 MAVSPGNL---VVAMVQ 317 (318)
Q Consensus 304 v~~sp~~~---~l~~~~ 317 (318)
|+|+|++. ++|+|.
T Consensus 489 Vafsp~~~~~~~lAsg~ 505 (524)
T 2j04_B 489 TKWNETSAGGKCYAFSN 505 (524)
T ss_dssp EEECCSTTTTTEEEEEC
T ss_pred EECCCCCCccHHHHhhc
Confidence 99999954 899874
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.2e-30 Score=216.52 Aligned_cols=236 Identities=19% Similarity=0.171 Sum_probs=186.7
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecch-hccccccccceeeeeccccc--------------------------CC
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQ-YASRSAMLHSLAVAWSPVLR--------------------------LS 69 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~p~~~--------------------------~~ 69 (318)
...+++++ |+.+++||+.+++....+.... ..+... +.+++|+|++. +.
T Consensus 63 ~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 138 (337)
T 1gxr_A 63 TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNY---IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT 138 (337)
T ss_dssp SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSB---EEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE
T ss_pred CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCc---EEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc
Confidence 34456666 9999999998876544433211 112222 33355555432 23
Q ss_pred CCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcE
Q 021036 70 SKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 70 ~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
.|...|.++++++++++|++++.||.|++||++++ +.+..+..|...|.+++| ++++++
T Consensus 139 ~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~--------------~~~~~~~~~~~~i~~~~~-------~~~~~~ 197 (337)
T 1gxr_A 139 SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ--------------TLVRQFQGHTDGASCIDI-------SNDGTK 197 (337)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEE-------CTTSSE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC--------------ceeeeeecccCceEEEEE-------CCCCCE
Confidence 46677899999999999999999999999999874 466778889999999999 889999
Q ss_pred EEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC
Q 021036 150 LVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 150 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 229 (318)
|++++.|+.|++||+++++....+. +...+.+++|+ |+++++++++.++.|++| +.+.
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~~~---------------~~~~v~~~~~s-----~~~~~l~~~~~~~~i~~~--~~~~ 255 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQHD---------------FTSQIFSLGYC-----PTGEWLAVGMESSNVEVL--HVNK 255 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE---------------CSSCEEEEEEC-----TTSSEEEEEETTSCEEEE--ETTS
T ss_pred EEEEecCCcEEEEECCCCceEeeec---------------CCCceEEEEEC-----CCCCEEEEEcCCCcEEEE--ECCC
Confidence 9999999999999999887666543 23478999999 999999999999999999 4555
Q ss_pred CeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCC
Q 021036 230 NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPG 309 (318)
Q Consensus 230 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 309 (318)
.+ ...+..|...|.+++|+|++++|++++.||.|++||+.++....... |...+.+++|+|+
T Consensus 256 ~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~---------------~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 256 PD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK---------------ESSSVLSCDISVD 317 (337)
T ss_dssp SC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---------------CSSCEEEEEECTT
T ss_pred CC---eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec---------------CCCcEEEEEECCC
Confidence 44 23567899999999999999999999999999999998876653332 2348899999999
Q ss_pred CcEEEEEe
Q 021036 310 NLVVAMVQ 317 (318)
Q Consensus 310 ~~~l~~~~ 317 (318)
+++|+++.
T Consensus 318 ~~~l~~~~ 325 (337)
T 1gxr_A 318 DKYIVTGS 325 (337)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEec
Confidence 99999874
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-30 Score=225.37 Aligned_cols=229 Identities=17% Similarity=0.156 Sum_probs=172.7
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++||+.+++.+..+.. |... +.+++|+|++ ++|++|+.|+.
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~----h~~~---v~~~~~~p~~------------------~~l~s~s~d~~ 188 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQG----HEQD---IYSLDYFPSG------------------DKLVSGSGDRT 188 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC----CSSC---EEEEEECTTS------------------SEEEEEETTSE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcc----CCCC---EEEEEEcCCC------------------CEEEEecCCCc
Confidence 445689999999999999988765333321 2222 3335555555 99999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
|++||+++++ ....+. +...+.+++| ++ ++++|++|+.|+.|++||+++++....+.
T Consensus 189 v~iwd~~~~~--------------~~~~~~-~~~~v~~~~~-------~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~ 246 (393)
T 1erj_A 189 VRIWDLRTGQ--------------CSLTLS-IEDGVTTVAV-------SPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 246 (393)
T ss_dssp EEEEETTTTE--------------EEEEEE-CSSCEEEEEE-------CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEECCCCe--------------eEEEEE-cCCCcEEEEE-------ECCCCCEEEEEcCCCcEEEEECCCCcEEEeec
Confidence 9999999854 333333 5678999999 66 88999999999999999999987766553
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCC--------eeeEeeeeecccCcee
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCN--------KFDKVGSYNAHDQVVT 246 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--------~~~~~~~~~~h~~~v~ 246 (318)
... .....|...|.+++|+ |++.+|++|+.|+.|++||+..... .......+.+|...|.
T Consensus 247 ~~~-------~~~~~h~~~v~~v~~~-----~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 314 (393)
T 1erj_A 247 SEN-------ESGTGHKDSVYSVVFT-----RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL 314 (393)
T ss_dssp -------------CCCSSCEEEEEEC-----TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEE
T ss_pred ccc-------cCCCCCCCCEEEEEEC-----CCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEE
Confidence 221 1113567789999999 9999999999999999996532111 0123456788999999
Q ss_pred EEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcC------CCcEEEEEe
Q 021036 247 GLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP------GNLVVAMVQ 317 (318)
Q Consensus 247 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp------~~~~l~~~~ 317 (318)
+++|+|++.+|++|+.|+.|++||+.++.... .+.+|...|.+++|++ ++.+||+|.
T Consensus 315 ~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~--------------~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 315 SVATTQNDEYILSGSKDRGVLFWDKKSGNPLL--------------MLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTCCEEE--------------EEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--------------EECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 99999999999999999999999998876543 1234666899999986 688999874
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-30 Score=217.87 Aligned_cols=194 Identities=21% Similarity=0.259 Sum_probs=166.9
Q ss_pred cCCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC
Q 021036 67 RLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 67 ~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 146 (318)
.+.+|..+|.++++++++++|++|+.||.|++|+..+++ ....+.+|...|.+++| +++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------------~~~~~~~h~~~v~~~~~-------~~~ 76 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------------FEKTISGHKLGISDVAW-------SSD 76 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEE-------CTT
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------------cchhhccCCCceEEEEE-------cCC
Confidence 456788888888888888999999999999999998743 55678899999999999 899
Q ss_pred CcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeec
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCD 226 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 226 (318)
+++|++++.|+.|++||+++++.+..+..+. ..|.+++|+ |++++|++|+.|+.|++| |
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--------------~~v~~~~~~-----~~~~~l~s~~~d~~i~iw--d 135 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--------------NYVFCCNFN-----PQSNLIVSGSFDESVRIW--D 135 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCS--------------SCEEEEEEC-----SSSSEEEEEETTSCEEEE--E
T ss_pred CCEEEEECCCCEEEEEECCCCcEEEEEcCCC--------------CCEEEEEEc-----CCCCEEEEEeCCCcEEEE--E
Confidence 9999999999999999999988777665544 489999999 999999999999999999 5
Q ss_pred cCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEE
Q 021036 227 ISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAV 306 (318)
Q Consensus 227 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 306 (318)
.++++ .+..+..|..+|.+++|+|++.+|++++.|+.|++||++++......... +...+..++|
T Consensus 136 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-------------~~~~~~~~~~ 200 (312)
T 4ery_A 136 VKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-------------DNPPVSFVKF 200 (312)
T ss_dssp TTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-------------SCCCEEEEEE
T ss_pred CCCCE--EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-------------CCCceEEEEE
Confidence 56665 66778889999999999999999999999999999999887654432222 2347899999
Q ss_pred cCCCcEEEEEe
Q 021036 307 SPGNLVVAMVQ 317 (318)
Q Consensus 307 sp~~~~l~~~~ 317 (318)
+|++++|+++.
T Consensus 201 ~~~~~~l~~~~ 211 (312)
T 4ery_A 201 SPNGKYILAAT 211 (312)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEc
Confidence 99999999874
No 34
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-31 Score=230.35 Aligned_cols=184 Identities=20% Similarity=0.336 Sum_probs=162.7
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 147 (318)
+.+|..+|++++|+|++++|++|+.||+|++||+.+++ ....+.+|.+.|.+++| ++++
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l~~h~~~V~~v~~-------~~~~ 162 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------------FERTLKGHTDSVQDISF-------DHSG 162 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------------CCEEECCCSSCEEEEEE-------CTTS
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEeccCCcEEEEEE-------cCCC
Confidence 56799999999999999999999999999999999854 45678999999999999 8999
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
++|++|+.|++|++||+.+++++..+..|. ..|.+++|+ |++++|++|+.|+.|++| |.
T Consensus 163 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~--------------~~V~~v~~~-----p~~~~l~s~s~D~~i~~w--d~ 221 (410)
T 1vyh_C 163 KLLASCSADMTIKLWDFQGFECIRTMHGHD--------------HNVSSVSIM-----PNGDHIVSASRDKTIKMW--EV 221 (410)
T ss_dssp SEEEEEETTSCCCEEETTSSCEEECCCCCS--------------SCEEEEEEC-----SSSSEEEEEETTSEEEEE--ET
T ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCC--------------CCEEEEEEe-----CCCCEEEEEeCCCeEEEE--EC
Confidence 999999999999999999888877766554 489999999 999999999999999999 56
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS 307 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 307 (318)
+++. .+..+.+|...|.++.|+|++.+|++|+.|++|++||+.++.... .+.+|...|.+++|+
T Consensus 222 ~~~~--~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~--------------~~~~h~~~v~~~~~~ 285 (410)
T 1vyh_C 222 QTGY--CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA--------------ELREHRHVVECISWA 285 (410)
T ss_dssp TTCC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------EECCCSSCEEEEEEC
T ss_pred CCCc--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee--------------EecCCCceEEEEEEc
Confidence 6665 677889999999999999999999999999999999998866543 223355689999999
Q ss_pred CC
Q 021036 308 PG 309 (318)
Q Consensus 308 p~ 309 (318)
|+
T Consensus 286 ~~ 287 (410)
T 1vyh_C 286 PE 287 (410)
T ss_dssp CS
T ss_pred Cc
Confidence 96
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.98 E-value=3.5e-31 Score=226.30 Aligned_cols=210 Identities=17% Similarity=0.141 Sum_probs=161.6
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------CCCCcc
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------LSSKKY 73 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~~~~~~ 73 (318)
..+++++.|++|++||+.+++...........|... +.+++|+|++. +..|..
T Consensus 106 ~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~---V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~ 182 (357)
T 4g56_B 106 KGILVASDSGAVELWEILEKESLLVNKFAKYEHDDI---VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS 182 (357)
T ss_dssp TEEEEEETTSCEEEC--------CCCCEEECCCSSC---EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEECCCEEEEeeccccceeEEEeeccCCCCCC---EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 457899999999999999887655544333345554 44577777653 457888
Q ss_pred cccccCCCCCc-cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-CcEEE
Q 021036 74 PVPQNGSSNWF-SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP-QVLLV 151 (318)
Q Consensus 74 ~v~~~~~s~~~-~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~-~~~l~ 151 (318)
.|.++++++++ .++++++.||.|++||+++++.. ....+..|...+.+++| +|+ +.+|+
T Consensus 183 ~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~------------~~~~~~~~~~~v~~v~~-------sp~~~~~la 243 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA------------TRIDFCASDTIPTSVTW-------HPEKDDTFA 243 (357)
T ss_dssp CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB------------CBCCCTTCCSCEEEEEE-------CTTSTTEEE
T ss_pred CEEEEEEccCCCceeeeeccCCceEEEECCCCcee------------eeeeeccccccccchhh-------hhcccceEE
Confidence 99999999986 58899999999999999986532 22234567788999999 655 57899
Q ss_pred EEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCC
Q 021036 152 TGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCN 230 (318)
Q Consensus 152 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~ 230 (318)
+|+.|+.|++||+++++....+..+. ..|++++|+ |++ .+|++|+.|++|++| |.+++
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~--------------~~v~~l~~s-----p~~~~~lasgs~D~~i~iw--d~~~~ 302 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHS--------------QNITGLAYS-----YHSSPFLASISEDCTVAVL--DADFS 302 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCS--------------SCEEEEEEC-----SSSSCCEEEEETTSCEEEE--CTTSC
T ss_pred EeecccceeEEECCCCcEeEEEeccc--------------eeEEEEEEc-----CCCCCEEEEEeCCCEEEEE--ECCCC
Confidence 99999999999999988877766554 489999999 776 689999999999999 56666
Q ss_pred eeeEeeeeecccCceeEEEEcC-CCCEEEEecCCCcEEEEEecC
Q 021036 231 KFDKVGSYNAHDQVVTGLAWAF-DGCCLYSCSQDNFVRSWIFHG 273 (318)
Q Consensus 231 ~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~ 273 (318)
+ .+ ...+|...|++++|+| ++.+|++++.|++|++|++..
T Consensus 303 ~--~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 303 E--VF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp E--EE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred c--Ee-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 5 33 3457999999999999 789999999999999999965
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.5e-30 Score=220.39 Aligned_cols=235 Identities=17% Similarity=0.200 Sum_probs=176.8
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++++.|+.|++||+..+........ ..|... +.+++|+|.. ++++|++|+.||.
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~h~~~---v~~~~~~~~~----------------~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 22 YGKRLATCSSDKTIKIFEVEGETHKLIDTL--TGHEGP---VWRVDWAHPK----------------FGTILASCSYDGK 80 (379)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSC---EEEEEECCGG----------------GCSEEEEEETTSC
T ss_pred CCCEEEEEECCCcEEEEecCCCcceeeeEe--cCCCCc---EEEEEeCCCC----------------CCCEEEEeccCCE
Confidence 355689999999999999974322111111 012222 3335555440 1599999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC--CcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP--QVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|++||+.+++ ...+..+..|...|.+++| +++ +.+|++++.|+.|++||++.+......
T Consensus 81 v~iwd~~~~~------------~~~~~~~~~~~~~v~~~~~-------~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 81 VLIWKEENGR------------WSQIAVHAVHSASVNSVQW-------APHEYGPLLLVASSDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp EEEEEEETTE------------EEEEEEECCCSSCEEEEEE-------CCGGGCSEEEEEETTSEEEEEECCTTSCCCEE
T ss_pred EEEEEcCCCc------------eeEeeeecCCCcceEEEEe-------CCCCCCCEEEEecCCCcEEEEecCCCCceeeE
Confidence 9999999864 2356778889999999999 787 899999999999999999877433221
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCC-------------CceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-------------RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-------------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
. ...|...|.+++|+ | ++.+|++++.||.|++||+............+.+
T Consensus 142 ~------------~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 142 I------------IDAHAIGVNSASWA-----PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp E------------EECCTTCEEEEEEC-----CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred E------------ecCCCCceEEEEEc-----CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 1 13455689999999 7 6999999999999999976555444456677889
Q ss_pred ccCceeEEEEcCC---CCEEEEecCCCcEEEEEecCCcee-eeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 241 HDQVVTGLAWAFD---GCCLYSCSQDNFVRSWIFHGNSLS-QVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 241 h~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
|...|.+++|+|+ +.+|++++.||.|++||++++... ..... ....|...|.+++|+|++++|+++
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLL----------KEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEES----------SSSCCSSCEEEEEECSSSCCEEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeee----------ccccCCCcEEEEEEcCCCCEEEEe
Confidence 9999999999999 899999999999999999875321 11110 112355689999999999999986
Q ss_pred e
Q 021036 317 Q 317 (318)
Q Consensus 317 ~ 317 (318)
.
T Consensus 275 ~ 275 (379)
T 3jrp_A 275 G 275 (379)
T ss_dssp E
T ss_pred c
Confidence 4
No 37
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=1.2e-29 Score=214.70 Aligned_cols=255 Identities=15% Similarity=0.165 Sum_probs=171.8
Q ss_pred CcCCCCCccceEEeeCCCceeEeecCCCCCCCceecch-hccccccccceeeeeccccc---------------------
Q 021036 10 NKMKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQ-YASRSAMLHSLAVAWSPVLR--------------------- 67 (318)
Q Consensus 10 ~~~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~p~~~--------------------- 67 (318)
.++.+.+...++|||.|++|++||+.+.+......... .+|... +.+++|+|++.
T Consensus 44 v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~---V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~ 120 (340)
T 4aow_A 44 IATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF---VSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 120 (340)
T ss_dssp EEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSC---EEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCC---EEEEEECCCCCEEEEEcccccceEEeecccce
Confidence 34555556778999999999999998876543332211 112222 33455555542
Q ss_pred ---CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCC
Q 021036 68 ---LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144 (318)
Q Consensus 68 ---~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 144 (318)
...+...+....+++++++|++|+.|+.+++||.... ........+|...|..++| +
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~-------------~~~~~~~~~~~~~v~~~~~-------~ 180 (340)
T 4aow_A 121 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV-------------CKYTVQDESHSEWVSCVRF-------S 180 (340)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC-------------EEEEECSSSCSSCEEEEEE-------C
T ss_pred eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCC-------------ceEEEEeccccCcccceEE-------c
Confidence 0012222333344444444555555555555544432 2334456788999999999 4
Q ss_pred CC--CcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEE
Q 021036 145 NP--QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDL 222 (318)
Q Consensus 145 ~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~v 222 (318)
++ ..++++++.|+.|++||+++++....+..|. .+|++++|+ |++++|++|+.||.|++
T Consensus 181 ~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~--------------~~v~~~~~s-----~~~~~l~s~s~Dg~i~i 241 (340)
T 4aow_A 181 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--------------GYLNTVTVS-----PDGSLCASGGKDGQAML 241 (340)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEC-----TTSSEEEEEETTCEEEE
T ss_pred cCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC--------------CcEEEEEEC-----CCCCEEEEEeCCCeEEE
Confidence 43 4678999999999999999988877765544 489999999 99999999999999999
Q ss_pred eeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeee
Q 021036 223 WKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCL 302 (318)
Q Consensus 223 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 302 (318)
| |.++.+ ++..+. +...|.++.|+|++. +++++.|+.|++||++++.......... ......+|...|+
T Consensus 242 w--d~~~~~--~~~~~~-~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~h~~~v~ 310 (340)
T 4aow_A 242 W--DLNEGK--HLYTLD-GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEV-----ISTSSKAEPPQCT 310 (340)
T ss_dssp E--ETTTTE--EEEEEE-CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC------------CCCCCEE
T ss_pred E--EeccCc--eeeeec-CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccc-----eeeeccCCCCCEE
Confidence 9 556665 555565 456899999999876 5566679999999998866543221111 0123446888999
Q ss_pred EEEEcCCCcEEEEEe
Q 021036 303 GMAVSPGNLVVAMVQ 317 (318)
Q Consensus 303 ~v~~sp~~~~l~~~~ 317 (318)
+++|+|||++|++|.
T Consensus 311 ~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 311 SLAWSADGQTLFAGY 325 (340)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 999999999999974
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.4e-30 Score=217.94 Aligned_cols=205 Identities=21% Similarity=0.202 Sum_probs=154.4
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeee-cc-ccccEEEEEeeeecCCCCC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF-QA-HNSWITSISLAVLSSDSSN 145 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~p~~~~~~~ 145 (318)
+.+|..+|.+++++++ +|++|+.|+.|++|++..+. ......+ .+ |...|++++| ++
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~------------~~~~~~~~~~~h~~~v~~v~~-------sp 68 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDD------------FTLIDVLDETAHKKAIRSVAW-------RP 68 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSC------------CEEEEEECTTCCCSCEEEEEE-------CT
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCC------------eEEEEEEecCCccCCEEEEEE-------CC
Confidence 5568888888888876 99999999999999998753 2344444 34 9999999999 89
Q ss_pred CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeee
Q 021036 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKC 225 (318)
Q Consensus 146 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~ 225 (318)
++++|++|+.|++|++||+....... ... .......+|...|.+++|+ |++++|++|+.|++|++|++
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~-~~~------~~~~~~~~h~~~V~~v~~s-----p~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRT-FEM------DLLAIIEGHENEVKGVAWS-----NDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC--------CCC------EEEEEEC----CEEEEEEC-----TTSCEEEEEETTSCEEEEEC
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCcc-ccc------eeEEEEcCCCCcEEEEEEC-----CCCCEEEEEeCCCEEEEEec
Confidence 99999999999999999986432100 000 0001224566699999999 99999999999999999965
Q ss_pred ccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEE
Q 021036 226 DISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMA 305 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 305 (318)
+......+.+..+.+|...|.+++|+|++.+|++++.|++|++||...+....+ ..+.+|...|.+++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~------------~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV------------AVLNGHEGTVWSSD 204 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE------------EEECCCSSCEEEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE------------EEccCCCCcEEEEE
Confidence 333333346778889999999999999999999999999999999876532211 12344677999999
Q ss_pred EcCC--CcEEEEEe
Q 021036 306 VSPG--NLVVAMVQ 317 (318)
Q Consensus 306 ~sp~--~~~l~~~~ 317 (318)
|+|+ +.+|++|.
T Consensus 205 ~~~~~~~~~l~s~s 218 (330)
T 2hes_X 205 FDKTEGVFRLCSGS 218 (330)
T ss_dssp ECCSSSSCEEEEEE
T ss_pred ecCCCCeeEEEEEe
Confidence 9998 77888874
No 39
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-31 Score=236.77 Aligned_cols=236 Identities=12% Similarity=0.014 Sum_probs=163.5
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSL 98 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 98 (318)
.+++++.|++|+|||+.++++.......-..+.+. +..++|+|.+ ..++++.+||+++.||+|+|
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~---V~~v~wsp~~------------~~~~~~~~LAs~s~Dgtvrl 239 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGE---VWDLKWHEGC------------HAPHLVGCLSFVSQEGTINF 239 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCS---EEEEEECSSC------------CCSSSSCEEEEEETTSCEEE
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCc---EEEEEECCCC------------CCCCCCceEEEEecCCeEEE
Confidence 45778899999999998876432111100012233 4458888863 11223579999999999999
Q ss_pred EEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce-eeeecccc
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL-QKSAEAHC 177 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~ 177 (318)
||+.++...... ......+...+.+|...|++++| +++ ..|++|+.||+|++||++++.. ...+
T Consensus 240 Wd~~~~~~~~~~---~~~~~~p~~~l~~h~~~v~sv~~-------s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~---- 304 (524)
T 2j04_B 240 LEIIDNATDVHV---FKMCEKPSLTLSLADSLITTFDF-------LSP-TTVVCGFKNGFVAEFDLTDPEVPSFYD---- 304 (524)
T ss_dssp EECCCCSSSSSE---EECCCSCSEEECCTTTCEEEEEE-------SSS-SEEEEEETTSEEEEEETTBCSSCSEEE----
T ss_pred EEcCCCcccccc---ceeecCceEEEEcCCCCEEEEEe-------cCC-CeEEEEeCCCEEEEEECCCCCCceEEe----
Confidence 999876421000 00001223467889999999999 554 4899999999999999987632 2223
Q ss_pred cccccceeeeeecccceeEEE--EeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccC--ceeEEEEcC
Q 021036 178 VPFSLLKEVVTVNTVPISVLS--LILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ--VVTGLAWAF 252 (318)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~l~--~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~ 252 (318)
..|..+|.+++ ++ +++ .+|++|+.|++|++| |+++.+ .+..+.+|.. .|.+++|+|
T Consensus 305 ----------~~H~~~V~sv~~~~s-----~~g~~~laS~S~D~tvklW--D~~~~~--~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 305 ----------QVHDSYILSVSTAYS-----DFEDTVVSTVAVDGYFYIF--NPKDIA--TTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp ----------ECSSSCEEEEEEECC-----TTSCCEEEEEETTSEEEEE--CGGGHH--HHCEEEEECSCCSCCCEEEET
T ss_pred ----------ecccccEEEEEEEcC-----CCCCeEEEEeccCCeEEEE--ECCCCC--cccccccccccCcccceEeCC
Confidence 34556899994 55 777 899999999999999 555554 3445556653 588999999
Q ss_pred CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 253 DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 253 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
++..+++++.|++|++||++++.... .+.+|.+.|++|+|+|+|++|++|.
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~--------------~l~gH~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVH--------------PLVSRETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCE--------------EEEECSSCEEEEECCSSCCBCEEEE
T ss_pred CcCeEEEeCCCCcEEEEECcccccce--------------eeecCCCceEEEEeCCCCCeEEEEE
Confidence 99999999999999999998765422 1223566999999999999999874
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=6.6e-30 Score=216.42 Aligned_cols=263 Identities=13% Similarity=0.075 Sum_probs=184.0
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++++.|+.|++||+.++.........-..|... +.+++|+|.. ++++|++|+.||.
T Consensus 22 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~----------------d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 22 YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSS---IVAIDWASPE----------------YGRIIASASYDKT 82 (351)
T ss_dssp SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSC---EEEEEECCGG----------------GCSEEEEEETTSC
T ss_pred CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCc---EEEEEEcCCC----------------CCCEEEEEcCCCe
Confidence 45568999999999999998765332221111112222 3345565530 2599999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC--CcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP--QVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|++||+++++... .....+.+..+..|...|.+++| +++ +++|++++.|+.|++||+++++....+
T Consensus 83 v~vwd~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 83 VKLWEEDPDQEEC-----SGRRWNKLCTLNDSKGSLYSVKF-------APAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp EEEEEECTTSCTT-----SSCSEEEEEEECCCSSCEEEEEE-------CCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred EEEEecCCCcccc-----cccCcceeeeecccCCceeEEEE-------cCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 9999998754210 00012557778899999999999 788 899999999999999999988766544
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCC---ceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEE
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR---LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAW 250 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~---~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 250 (318)
..... ..........+...+.+++|+ |+ +..+++++.++.+.+| +...++...+..+.+|...|++++|
T Consensus 151 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~h~~~i~~~~~ 222 (351)
T 3f3f_A 151 TLTSE-MKVLSIPPANHLQSDFCLSWC-----PSRFSPEKLAVSALEQAIIYQ--RGKDGKLHVAAKLPGHKSLIRSISW 222 (351)
T ss_dssp EEEEE-EESCSCCCSSCSCCCEEEEEC-----CCSSSCCEEEEEETTEEEEEE--ECTTSCEEEEEECCCCCSCEEEEEE
T ss_pred ccccc-ccccccccCCcccceeEEEec-----cCCCCCcEEEEecCCCcEEEE--ccCCCceeeeeecCCCCcceeEEEE
Confidence 32211 111111223466789999999 76 8999999999999777 4555555567788899999999999
Q ss_pred cCCC----CEEEEecCCCcEEEEEecCCceeeeecCCCC-----------CCc---------------------cccccC
Q 021036 251 AFDG----CCLYSCSQDNFVRSWIFHGNSLSQVSIPTNT-----------PGL---------------------QSCTDL 294 (318)
Q Consensus 251 ~~~~----~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-----------~~~---------------------~~~~~~ 294 (318)
+|++ .+|++++.||.|++||++.+........... ... .....+
T Consensus 223 ~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (351)
T 3f3f_A 223 APSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH 302 (351)
T ss_dssp CCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEE
T ss_pred CCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE
Confidence 9998 7999999999999999986432211100000 000 011224
Q ss_pred CCcceeeeEEEEcCCCcEEEEEe
Q 021036 295 PDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 295 ~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+|...|++++|+|++++|+++.
T Consensus 303 ~~h~~~v~~~~~s~~~~~l~s~~ 325 (351)
T 3f3f_A 303 DDHNGEVWSVSWNLTGTILSSAG 325 (351)
T ss_dssp CTTSSCEEEEEECSSSCCEEEEE
T ss_pred ecccccEEEEEEcCCCCEEEEec
Confidence 47889999999999999999874
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=9.4e-30 Score=230.77 Aligned_cols=232 Identities=21% Similarity=0.294 Sum_probs=183.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccc-----------------------cCCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVL-----------------------RLSSKK 72 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~-----------------------~~~~~~ 72 (318)
+...+++++.|+.+++||... +.+..+.. |... +.+++|+|++ .+.+|.
T Consensus 273 d~~~l~~~~~d~~i~~w~~~~-~~~~~~~~----h~~~---v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~ 344 (577)
T 2ymu_A 273 DGQTIASASDDKTVKLWNRNG-QLLQTLTG----HSSS---VWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHS 344 (577)
T ss_dssp TSSEEEEEETTSCEEEEETTS-CEEEEECC----CSSC---EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCS
T ss_pred CCCEEEEEeCCCEEEEEeCCC-cEEEEEec----CCCC---eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCC
Confidence 445689999999999999753 33222221 2222 1223333332 145678
Q ss_pred ccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE
Q 021036 73 YPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 73 ~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
.+|.++++++++++|++|+.||.|++|+.. .+.+..+.+|...|.+++| ++++++|++
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~---------------~~~~~~~~~~~~~v~~~~~-------s~dg~~l~~ 402 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNRN---------------GQLLQTLTGHSSSVRGVAF-------SPDGQTIAS 402 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETT---------------CCEEEEEECCSSCEEEEEE-------CTTSSCEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcCC---------------CCEEEEecCCCCCeEEEEE-------CCCCCEEEE
Confidence 889999999999999999999999999964 3456778899999999999 899999999
Q ss_pred EeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCee
Q 021036 153 GSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKF 232 (318)
Q Consensus 153 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 232 (318)
++.|+.|++||. +++....+.. |...|.+++|+ |++++|++++.|+.|++|+ ... +
T Consensus 403 ~~~d~~v~~~~~-~~~~~~~~~~--------------~~~~v~~~~~s-----~d~~~l~~~~~d~~v~~w~--~~~-~- 458 (577)
T 2ymu_A 403 ASDDKTVKLWNR-NGQLLQTLTG--------------HSSSVWGVAFS-----PDDQTIASASDDKTVKLWN--RNG-Q- 458 (577)
T ss_dssp EETTSEEEEECT-TCCEEEEEEC--------------CSSCEEEEEEC-----TTSSEEEEEETTSEEEEEE--TTS-C-
T ss_pred EeCCCEEEEEeC-CCCEEEEecC--------------CCCCeEEEEEC-----CCCCEEEEEcCCCEEEEEE--CCC-C-
Confidence 999999999996 4555555443 44589999999 9999999999999999995 333 3
Q ss_pred eEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcE
Q 021036 233 DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLV 312 (318)
Q Consensus 233 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 312 (318)
.+..+.+|...|++++|+|++++|++++.|++|++||........+. +|...|++++|+|||++
T Consensus 459 -~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~---------------~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 459 -LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT---------------GHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp -EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEE---------------CCSSCEEEEEECTTSSC
T ss_pred -EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEe---------------CCCCCEEEEEEcCCCCE
Confidence 56678899999999999999999999999999999997554444433 35568999999999999
Q ss_pred EEEEe
Q 021036 313 VAMVQ 317 (318)
Q Consensus 313 l~~~~ 317 (318)
||++.
T Consensus 523 l~s~~ 527 (577)
T 2ymu_A 523 IASAS 527 (577)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=2.9e-30 Score=222.50 Aligned_cols=204 Identities=17% Similarity=0.236 Sum_probs=157.9
Q ss_pred CCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCC-CccEEEEecCC
Q 021036 15 SNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSN-WFSILAVGGRS 93 (318)
Q Consensus 15 ~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~-~~~~l~~g~~d 93 (318)
.....+++|+.|+++++||+.+++++..+.... ..+|..+|.++.+++ ++++|++|+.|
T Consensus 168 ~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~--------------------~~~h~~~v~~~~~~~~~~~~l~sgs~D 227 (380)
T 3iz6_a 168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEF--------------------PSGHTADVLSLSINSLNANMFISGSCD 227 (380)
T ss_dssp SSSSCEEEECTTSCEEEECTTTCCEEEEECCCS--------------------SSSCCSCEEEEEECSSSCCEEEEEETT
T ss_pred CCCCEEEEECCCCcEEEEEcCCCcEEEEeeccc--------------------CCCCccCeEEEEeecCCCCEEEEEECC
Confidence 334568999999999999999987654432110 112333334444333 36899999999
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|.|++||++.. .+.+..+.+|...|++++| +|++++|++|+.|++|++||+++++.+..+
T Consensus 228 ~~v~~wd~~~~-------------~~~~~~~~~h~~~v~~v~~-------~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 228 TTVRLWDLRIT-------------SRAVRTYHGHEGDINSVKF-------FPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp SCEEEEETTTT-------------CCCCEEECCCSSCCCEEEE-------CTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCC-------------CcceEEECCcCCCeEEEEE-------ecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 99999999743 2345678899999999999 899999999999999999999999887766
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee----ecccCceeEEE
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY----NAHDQVVTGLA 249 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~----~~h~~~v~~~~ 249 (318)
..+... ...+...|.+++|+ |+|.+|++|+.||.|++|| ...++ .+..+ .+|.+.|++++
T Consensus 288 ~~~~~~-------~~~~~~~v~~~~~s-----~~g~~l~~g~~dg~i~vwd--~~~~~--~~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 288 NREPDR-------NDNELPIVTSVAFS-----ISGRLLFAGYSNGDCYVWD--TLLAE--MVLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp CCCCSS-------SCCSSCSCSEEEEC-----SSSSEEEEECTTSCEEEEE--TTTCC--EEEEECCSCSSCCCCCCEEE
T ss_pred cccccc-------cccccCceEEEEEC-----CCCCEEEEEECCCCEEEEE--CCCCc--eEEEEecccCCCCCceEEEE
Confidence 543210 01122358899999 9999999999999999994 44544 33333 57999999999
Q ss_pred EcCCCCEEEEecCCCcEEEEEecCC
Q 021036 250 WAFDGCCLYSCSQDNFVRSWIFHGN 274 (318)
Q Consensus 250 ~~~~~~~l~s~~~d~~v~iwd~~~~ 274 (318)
|+|+|.+|++|+.|++|++|++.+.
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999999999999999998764
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=8.4e-30 Score=218.39 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=175.2
Q ss_pred CccceEEeeCCCceeEeecCCCC--CCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNC--CLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS 93 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d 93 (318)
+...+++++.|+.+++||+.+++ .+..+.. |... +.+++|+|++ ++|++++.|
T Consensus 19 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~----h~~~---v~~~~~~~~~------------------~~l~~~~~d 73 (372)
T 1k8k_C 19 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKE----HNGQ---VTGVDWAPDS------------------NRIVTCGTD 73 (372)
T ss_dssp TSSEEEEECSSSEEEEEEEETTEEEEEEEEEC----CSSC---EEEEEEETTT------------------TEEEEEETT
T ss_pred CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC----CCCc---ccEEEEeCCC------------------CEEEEEcCC
Confidence 45568889999999999998875 3222221 3332 3446666655 999999999
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|.|++||+++++. .....+..|...|.+++| ++++++|++++.|+.|++||++.++.....
T Consensus 74 g~i~vwd~~~~~~------------~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 134 (372)
T 1k8k_C 74 RNAYVWTLKGRTW------------KPTLVILRINRAARCVRW-------APNEKKFAVGSGSRVISICYFEQENDWWVC 134 (372)
T ss_dssp SCEEEEEEETTEE------------EEEEECCCCSSCEEEEEE-------CTTSSEEEEEETTSSEEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCee------------eeeEEeecCCCceeEEEE-------CCCCCEEEEEeCCCEEEEEEecCCCcceee
Confidence 9999999987642 233445678999999999 899999999999999999999877632211
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeec----------------cCCCeeeEeee
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCD----------------ISCNKFDKVGS 237 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~----------------~~~~~~~~~~~ 237 (318)
. .....|...|.+++|+ |++.+|++++.||.|++||+. ...++ .+..
T Consensus 135 ~----------~~~~~~~~~i~~~~~~-----~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 197 (372)
T 1k8k_C 135 K----------HIKKPIRSTVLSLDWH-----PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE--LMFE 197 (372)
T ss_dssp E----------EECTTCCSCEEEEEEC-----TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC--EEEE
T ss_pred e----------eeecccCCCeeEEEEc-----CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhh--heEe
Confidence 1 1112345689999999 999999999999999999643 22333 6677
Q ss_pred eecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 238 YNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+.+|...|.+++|+|++.+|++++.|+.|++||++++...... ..|...|.+++|+|++++|++|
T Consensus 198 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 198 SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL--------------ASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE--------------ECSSCCEEEEEEEETTEEEEEE
T ss_pred cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE--------------ccCCCCeEEEEEecCCCEEEEE
Confidence 7889999999999999999999999999999999876654322 1244589999999999999987
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-30 Score=226.12 Aligned_cols=264 Identities=17% Similarity=0.198 Sum_probs=193.6
Q ss_pred eccCcCCCCCccceEEe----------eCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc---------
Q 021036 7 FTSNKMKDSNTHPTVAA----------SKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR--------- 67 (318)
Q Consensus 7 ~~~~~~~~~~~~~~~t~----------s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~--------- 67 (318)
..+..+.+.+...++++ +.|+.+++||+.+++..+.+.. +.+... +.+++|+|++.
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~--~~~~~~---v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS--LQVDSK---FNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC--CCCSSC---EEEEEECSSSSCEEEEESSS
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE--EecCCc---eEEEEECCCCCeEEEEccCC
Confidence 34455666556678888 8999999999988653222111 112222 22344444332
Q ss_pred -------------------CCCCcccccccCCCCC-ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccc
Q 021036 68 -------------------LSSKKYPVPQNGSSNW-FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH 127 (318)
Q Consensus 68 -------------------~~~~~~~v~~~~~s~~-~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h 127 (318)
+..|..+|.+++++++ +++|++++.||.|++||+.+++..... ........+..|
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~~~~~~~ 164 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN-----YTPLTPGQSMSS 164 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT-----CCCBCCCCSCCS
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc-----ccccccccccCC
Confidence 4468889999999998 899999999999999999876410000 001122335678
Q ss_pred cccEEEEEeeeecCCCCCC-CcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC
Q 021036 128 NSWITSISLAVLSSDSSNP-QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP 206 (318)
Q Consensus 128 ~~~v~~~~~~p~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~ 206 (318)
...|.+++| +++ +.+|++++.|+.|++||+++++....+..+... ..|...+.+++|+ |
T Consensus 165 ~~~v~~~~~-------~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~-----~ 224 (416)
T 2pm9_A 165 VDEVISLAW-------NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN--------SGIKQQLSVVEWH-----P 224 (416)
T ss_dssp SCCCCEEEE-------CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS--------SCCCCCEEEEEEC-----S
T ss_pred CCCeeEEEe-------CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc--------cccCCceEEEEEC-----C
Confidence 999999999 777 789999999999999999998877776544210 1224589999999 8
Q ss_pred Cc-eEEEEEeCCC---cEEEeeeccCCCeeeEeeeee-cccCceeEEEEcC-CCCEEEEecCCCcEEEEEecCCceeeee
Q 021036 207 RL-MLLAVGKGSG---SFDLWKCDISCNKFDKVGSYN-AHDQVVTGLAWAF-DGCCLYSCSQDNFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 207 ~~-~~l~~~~~dg---~i~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 280 (318)
++ .++++++.|+ .|++|| .++.. .++..+. +|...|.+++|+| ++.+|++++.|+.|++||+++++....
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d--~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~- 300 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWD--LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ- 300 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEE--TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEE-
T ss_pred CCCCEEEEEECCCCCceEEEEe--CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcccee-
Confidence 86 6999999998 999995 44432 1556677 8999999999999 899999999999999999988655432
Q ss_pred cCCCCCCccccccCCCcceeeeEEEEcCCC-cEEEEEe
Q 021036 281 IPTNTPGLQSCTDLPDAFVSCLGMAVSPGN-LVVAMVQ 317 (318)
Q Consensus 281 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~~~~ 317 (318)
+.+|...|.+++|+|++ .+|+++.
T Consensus 301 -------------~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 301 -------------FPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp -------------EECSSSCCCCEEECTTCTTEEEECC
T ss_pred -------------ecCCCCceEEEEECCCCCCEEEEEe
Confidence 12345689999999998 7888863
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=3.5e-30 Score=220.74 Aligned_cols=190 Identities=10% Similarity=-0.020 Sum_probs=144.3
Q ss_pred ccccCCCCCccEEE--EecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE
Q 021036 75 VPQNGSSNWFSILA--VGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 75 v~~~~~s~~~~~l~--~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
+.+++|||+|++++ +++.|++|+|||+++++ .+..+ .|...|.+++| +|+|++|++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~--------------~~~~~-~~~~~V~~v~f-------spdg~~l~s 193 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLT--------------EKFEI-ETRGEVKDLHF-------STDGKVVAY 193 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTE--------------EEEEE-ECSSCCCEEEE-------CTTSSEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc--------------EEEEe-CCCCceEEEEE-------ccCCceEEe
Confidence 44555556668875 45579999999999854 44445 37788999999 999999999
Q ss_pred EeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC----cEEEeeeccC
Q 021036 153 GSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG----SFDLWKCDIS 228 (318)
Q Consensus 153 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg----~i~vw~~~~~ 228 (318)
++.| .+++|+..+++....... ..|...|.+++|+ |++..+++++.|+ .+++|+....
T Consensus 194 ~s~~-~~~~~~~~~~~~~~~~~~------------~~~~~~v~~v~fs-----pdg~~l~~~s~d~~~~~~i~~~~~~~~ 255 (365)
T 4h5i_A 194 ITGS-SLEVISTVTGSCIARKTD------------FDKNWSLSKINFI-----ADDTVLIAASLKKGKGIVLTKISIKSG 255 (365)
T ss_dssp ECSS-CEEEEETTTCCEEEEECC------------CCTTEEEEEEEEE-----ETTEEEEEEEESSSCCEEEEEEEEETT
T ss_pred ccce-eEEEEEeccCcceeeeec------------CCCCCCEEEEEEc-----CCCCEEEEEecCCcceeEEeecccccc
Confidence 9855 566777666655432211 2345589999999 9999999999777 4666644333
Q ss_pred CCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcC
Q 021036 229 CNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP 308 (318)
Q Consensus 229 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 308 (318)
.........+.+|...|++++|+|+|++||+|+.|++|+|||+++++..... +.+|...|++|+|+|
T Consensus 256 ~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~-------------~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 256 NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF-------------KQAHSFAITEVTISP 322 (365)
T ss_dssp EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE-------------TTSSSSCEEEEEECT
T ss_pred eecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe-------------cCcccCCEEEEEECC
Confidence 2233345567789999999999999999999999999999999987765421 234777999999999
Q ss_pred CCcEEEEEe
Q 021036 309 GNLVVAMVQ 317 (318)
Q Consensus 309 ~~~~l~~~~ 317 (318)
||++||+|.
T Consensus 323 dg~~laS~S 331 (365)
T 4h5i_A 323 DSTYVASVS 331 (365)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEe
Confidence 999999984
No 46
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.4e-30 Score=222.25 Aligned_cols=273 Identities=14% Similarity=0.107 Sum_probs=194.2
Q ss_pred cCCCCCccceEEeeCCCceeEeec----CCCCC------CCceecchhc------cccccccceeeeeccccc-------
Q 021036 11 KMKDSNTHPTVAASKSKGNSITKI----PSNCC------LPLITADQYA------SRSAMLHSLAVAWSPVLR------- 67 (318)
Q Consensus 11 ~~~~~~~~~~~t~s~d~~i~iwd~----~~~~~------~~~~~~~~~~------~~~~~~~~~~~~w~p~~~------- 67 (318)
.+.+.....+++++.|+.+++||+ .+++. ...+...... |.. .+.+++|+|++.
T Consensus 52 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~ 128 (425)
T 1r5m_A 52 TWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTN---QVTCLAWSHDGNSIVTGVE 128 (425)
T ss_dssp EECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CB---CEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCC---ceEEEEEcCCCCEEEEEeC
Confidence 344433347899999999999999 77763 2222110000 122 244577776643
Q ss_pred ----------------CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCcccccccccc-----------------
Q 021036 68 ----------------LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKV----------------- 114 (318)
Q Consensus 68 ----------------~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~----------------- 114 (318)
+..|..+|.++++++++++|++++.||.|++||+.+++.........
T Consensus 129 dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (425)
T 1r5m_A 129 NGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSL 208 (425)
T ss_dssp TSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCC
T ss_pred CCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcce
Confidence 44688899999999999999999999999999998776433211000
Q ss_pred -------------------------CCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce
Q 021036 115 -------------------------PTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL 169 (318)
Q Consensus 115 -------------------------~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 169 (318)
....+.+..+..|...|.+++| ++++++|++++.|+.|++||+++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEF-------NDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEE-------ETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEE-------CCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 0112334456688999999999 88999999999999999999998877
Q ss_pred eeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEE
Q 021036 170 QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLA 249 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 249 (318)
...+..+ ...|.+++|+ |++ .+++++.|+.|++| +.++.+ .+..+..|...|.+++
T Consensus 282 ~~~~~~~--------------~~~i~~~~~~-----~~~-~l~~~~~d~~i~i~--d~~~~~--~~~~~~~~~~~i~~~~ 337 (425)
T 1r5m_A 282 QNCFYGH--------------SQSIVSASWV-----GDD-KVISCSMDGSVRLW--SLKQNT--LLALSIVDGVPIFAGR 337 (425)
T ss_dssp SEEECCC--------------SSCEEEEEEE-----TTT-EEEEEETTSEEEEE--ETTTTE--EEEEEECTTCCEEEEE
T ss_pred ceEecCC--------------CccEEEEEEC-----CCC-EEEEEeCCCcEEEE--ECCCCc--EeEecccCCccEEEEE
Confidence 7666544 3489999999 888 99999999999999 556665 6677888999999999
Q ss_pred EcCCCCEEEEecCCCcEEEEEecCCceeeeec--CCCCCC----ccccccCCCcce--eeeEEEEcCCCcEEEEEe
Q 021036 250 WAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSI--PTNTPG----LQSCTDLPDAFV--SCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 250 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~~----~~~~~~~~~h~~--~v~~v~~sp~~~~l~~~~ 317 (318)
|+|++++|++++.||.|++||+.++....... ...... ......+.+|.. .|.+++|+|++++|+++.
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 99999999999999999999998755110000 000000 001123445655 899999999999998874
No 47
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.1e-30 Score=226.20 Aligned_cols=245 Identities=10% Similarity=0.030 Sum_probs=155.0
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecc-hhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITAD-QYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
...+++++.|+++++||+.++++....... ..+|.+. +..++|+|.. ......++++||+|+.|++
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~---v~~v~~~p~~----------~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNF---VNDIDIADVY----------SADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSC---EEEEEEEEEE----------CTTCSEEEEEEEEEETTSE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCc---eEEEEEcccc----------ccccCCCCCEEEEEECCCe
Confidence 345899999999999999887553221111 1124443 2335555521 0000115699999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC-cEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ-VLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
|+|||+.++ ..+..+..|..+|.+++| +|++ .+|++++.|++|++||+++++......
T Consensus 168 v~~Wd~~~~--------------~~~~~~~~~~~~v~~v~~-------~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 168 LIIWRLTDE--------------GPILAGYPLSSPGISVQF-------RPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp EEEEEEETT--------------EEEEEEEECSSCEEEEEE-------ETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred EEEEECCCC--------------ceeeeecCCCCCcEEEEE-------CCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 999999874 345566788999999999 6666 589999999999999999876654432
Q ss_pred ccccccc-----------cceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccC
Q 021036 175 AHCVPFS-----------LLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ 243 (318)
Q Consensus 175 ~~~~~~~-----------~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~ 243 (318)
.+..... ........|...+.++.|. ++++..+++++.|+.+++||+ ..++ ....+..|..
T Consensus 227 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~----~~dg~~l~s~s~d~~i~vwd~--~~~~--~~~~l~~~~~ 298 (393)
T 4gq1_A 227 QTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI----GSDGSGILAMCKSGAWLRWNL--FANN--DYNEISDSTM 298 (393)
T ss_dssp ----CSCCCSEEEESGGGC------CCSSSCSEEEEE----TTTTCEEEEECTTSEEEEEEC------------------
T ss_pred ccCCcccceEEecccccceeeeecccccccceeeeee----cCCCCEEEEEeCCCCEEEEEC--ccCC--CCceEeeecC
Confidence 2211000 0001224567788899987 489999999999999999954 3332 2222322322
Q ss_pred cee------------------EEEEcC--CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeE
Q 021036 244 VVT------------------GLAWAF--DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLG 303 (318)
Q Consensus 244 ~v~------------------~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 303 (318)
.+. ...|+| ++.++++|+.||+|++||+.++....... +|..+|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~--------------~~~~~V~s 364 (393)
T 4gq1_A 299 KLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI--------------QLGMPIVD 364 (393)
T ss_dssp -----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE--------------ECSSCEEE
T ss_pred ccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec--------------CCCCcEEE
Confidence 222 233444 34467888999999999998866543221 13458999
Q ss_pred EEEcCCCcEEEEEe
Q 021036 304 MAVSPGNLVVAMVQ 317 (318)
Q Consensus 304 v~~sp~~~~l~~~~ 317 (318)
|+|+|||++||++.
T Consensus 365 vafspdG~~LA~as 378 (393)
T 4gq1_A 365 FCWHQDGSHLAIAT 378 (393)
T ss_dssp EEECTTSSEEEEEE
T ss_pred EEEcCCCCEEEEEe
Confidence 99999999999874
No 48
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=8.4e-30 Score=216.63 Aligned_cols=201 Identities=15% Similarity=0.159 Sum_probs=160.7
Q ss_pred cCCCCcccccccCC-----CC-CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeec
Q 021036 67 RLSSKKYPVPQNGS-----SN-WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLS 140 (318)
Q Consensus 67 ~~~~~~~~v~~~~~-----s~-~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 140 (318)
.+.+|..+|+++++ ++ ++++|++|+.|++|++||+.+++.. .........+.+|...|.+++|
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~-------~~~~~~~~~l~~h~~~V~~~~~---- 84 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN-------GYFGIPHKALTGHNHFVSDLAL---- 84 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS-------SBSEEEEEEECCCSSCEEEEEE----
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc-------cccccccchhccCCCceEEEEE----
Confidence 46678888888877 55 7899999999999999999764311 0013456778999999999999
Q ss_pred CCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcE
Q 021036 141 SDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSF 220 (318)
Q Consensus 141 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i 220 (318)
++++.+|++|+.|++|++||+++++....+..|. ..|.+++|+ |++++|++++.|+.|
T Consensus 85 ---~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~--------------~~v~~v~~s-----p~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 85 ---SQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ--------------SEVYSVAFS-----PDNRQILSAGAEREI 142 (343)
T ss_dssp ---CSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC--------------SCEEEEEEC-----SSTTEEEEEETTSCE
T ss_pred ---CCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC--------------CcEEEEEEC-----CCCCEEEEEcCCCEE
Confidence 8999999999999999999999998777665544 489999999 999999999999999
Q ss_pred EEeeeccCCCeeeEeeeeecccCceeEEEEcCCC----------CEEEEecCCCcEEEEEecCCceeeeecCCCCCCccc
Q 021036 221 DLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG----------CCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQS 290 (318)
Q Consensus 221 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----------~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 290 (318)
++||+ ............+|...|.+++|+|++ .+|++++.|+.|++||........+
T Consensus 143 ~~wd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~----------- 209 (343)
T 2xzm_R 143 KLWNI--LGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF----------- 209 (343)
T ss_dssp EEEES--SSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE-----------
T ss_pred EEEec--cCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE-----------
Confidence 99954 333211222233788999999999986 7899999999999999543333222
Q ss_pred cccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 291 CTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 291 ~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+|...|.+++|+|+|++|++|.
T Consensus 210 ----~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 210 ----KAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp ----ECCSSCEEEEEECTTSSEEEEEE
T ss_pred ----cCccccceEEEECCCCCEEEEEc
Confidence 23556899999999999999985
No 49
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=9.4e-30 Score=223.56 Aligned_cols=216 Identities=16% Similarity=0.188 Sum_probs=160.7
Q ss_pred CCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEe-------eeccccccEEEEEeeeecC
Q 021036 69 SSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIG-------LFQAHNSWITSISLAVLSS 141 (318)
Q Consensus 69 ~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~p~~~ 141 (318)
.+|..+|.++++++++++|++| .||.|++||++++. +.+. .+.+|...|++++|
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~----- 234 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITD-------------RSFNIVDIKPANMEELTEVITAAEF----- 234 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEE-------------EEEEEEECCCSSGGGCCCCEEEEEE-----
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC-------------ceeeeeecccccccccCcceEEEEE-----
Confidence 4688899999999999999999 79999999998422 2222 36689999999999
Q ss_pred CCCCCC-cEEEEEeCCCcEEEEECCCcce----eeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC
Q 021036 142 DSSNPQ-VLLVTGSSDGSVRIWDGYIQEL----QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG 216 (318)
Q Consensus 142 ~~~~~~-~~l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~ 216 (318)
++++ ++|++|+.||.|++||+++++. ...+..+..+. .......|...|.+++|+ |++.+|++++.
T Consensus 235 --~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s-----~~g~~l~~~~~ 305 (447)
T 3dw8_B 235 --HPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPS--NRSFFSEIISSISDVKFS-----HSGRYMMTRDY 305 (447)
T ss_dssp --CSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-------CCHHHHHTTCEEEEEEC-----TTSSEEEEEES
T ss_pred --CCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcc--ccccccccCceEEEEEEC-----CCCCEEEEeeC
Confidence 8887 9999999999999999998875 45555443210 001112234589999999 99999999998
Q ss_pred CCcEEEeeeccCC-CeeeEeeeeecccCc---------------eeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee
Q 021036 217 SGSFDLWKCDISC-NKFDKVGSYNAHDQV---------------VTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 217 dg~i~vw~~~~~~-~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 280 (318)
+.|++|| .+. ++ ++..+.+|... +..++|+|++++|++++.||.|++||+.++....+.
T Consensus 306 -~~v~iwd--~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 306 -LSVKVWD--LNMENR--PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp -SEEEEEE--TTCCSS--CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred -CeEEEEe--CCCCcc--ccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 9999995 443 33 56677777542 234899999999999999999999999988776554
Q ss_pred cCCCCCCc---------c-c--------cccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 281 IPTNTPGL---------Q-S--------CTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 281 ~~~~~~~~---------~-~--------~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+...... . + ......+...|..++|+|++.+||++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~ 435 (447)
T 3dw8_B 381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVAT 435 (447)
T ss_dssp CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEEC
T ss_pred ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEe
Confidence 43221100 0 0 001124567899999999999999874
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=7.5e-30 Score=222.48 Aligned_cols=218 Identities=12% Similarity=0.116 Sum_probs=174.0
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++++.|+.+++||+.+++....+... .. .....|+|++ ++|++|+.||.|
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-----~~---~~~~~~~~~~------------------~~l~~~~~dg~i 121 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRA-----DY---TAVDTAKLQM------------------RRFILGTTEGDI 121 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSC-----CE---EEEEEECSSS------------------CEEEEEETTSCE
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecC-----Cc---eEEEEEecCC------------------CEEEEEECCCCE
Confidence 345799999999999999887765554421 11 2234677777 999999999999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
++||+.++ +....+.+|...|++++| ++++++|++++.|+.|++||+++++....+..|
T Consensus 122 ~iwd~~~~--------------~~~~~~~~h~~~v~~~~~-------~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 122 KVLDSNFN--------------LQREIDQAHVSEITKLKF-------FPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp EEECTTSC--------------EEEEETTSSSSCEEEEEE-------CTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred EEEeCCCc--------------ceeeecccccCccEEEEE-------CCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 99999874 455677899999999999 899999999999999999999988877666544
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec---c------------
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA---H------------ 241 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---h------------ 241 (318)
...|.+++|+ |++.+|++++.||.|++| |.++++ .+..+.. |
T Consensus 181 --------------~~~v~~~~~~-----~~~~~l~s~~~d~~v~iw--d~~~~~--~~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 181 --------------RATVTDIAII-----DRGRNVLSASLDGTIRLW--ECGTGT--TIHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp --------------SSCEEEEEEE-----TTTTEEEEEETTSCEEEE--ETTTTE--EEEEECBTTBTTCCEEEEEEEEC
T ss_pred --------------CCcEEEEEEc-----CCCCEEEEEcCCCcEEEe--ECCCCc--eeEEeecCCCCCCCccEEEEecC
Confidence 4589999999 999999999999999999 555665 4455543 2
Q ss_pred ---------cCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc-
Q 021036 242 ---------DQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL- 311 (318)
Q Consensus 242 ---------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~- 311 (318)
...+.+++|+|++++|++++.||.|++||++++........ .|...|.+++|+|+++
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~ 304 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS-------------KFTCSCNSLTVDGNNAN 304 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC-------------TTSSCEEEEEECSSCTT
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc-------------ccCCCceeEEEeCCCCC
Confidence 34555666789999999999999999999988665433221 2556899999999998
Q ss_pred EEEEEe
Q 021036 312 VVAMVQ 317 (318)
Q Consensus 312 ~l~~~~ 317 (318)
+|++|.
T Consensus 305 ~l~~g~ 310 (420)
T 3vl1_A 305 YIYAGY 310 (420)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 888874
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2.9e-29 Score=216.30 Aligned_cols=203 Identities=15% Similarity=0.157 Sum_probs=155.2
Q ss_pred cCCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEe
Q 021036 11 KMKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVG 90 (318)
Q Consensus 11 ~~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g 90 (318)
.+.+.+...+++|+.|+.|++||+.+++....+.. ..|... +.+++|+|.. +++|+++
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~h~~~---v~~~~~~~~~-----------------~~~l~s~ 137 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG--MGPGDA---ITGMKFNQFN-----------------TNQLFVS 137 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC--CSTTCB---EEEEEEETTE-----------------EEEEEEE
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec--CCcCCc---eeEEEeCCCC-----------------CCEEEEE
Confidence 34444446899999999999999998776544432 124443 4457777732 4899999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCccee
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
+.||.|++||+.+.. .........|...|.+++| ++++++|++++.|+.|++||++ ++..
T Consensus 138 ~~d~~i~iwd~~~~~------------~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~i~d~~-~~~~ 197 (383)
T 3ei3_B 138 SIRGATTLRDFSGSV------------IQVFAKTDSWDYWYCCVDV-------SVSRQMLATGDSTGRLLLLGLD-GHEI 197 (383)
T ss_dssp ETTTEEEEEETTSCE------------EEEEECCCCSSCCEEEEEE-------ETTTTEEEEEETTSEEEEEETT-SCEE
T ss_pred eCCCEEEEEECCCCc------------eEEEeccCCCCCCeEEEEE-------CCCCCEEEEECCCCCEEEEECC-CCEE
Confidence 999999999998632 2223333445688999999 8899999999999999999994 5555
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEE
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLA 249 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 249 (318)
..+.. |...|.+++|+ |++. +|++++.|+.|++||+.........+..+ +|...|.+++
T Consensus 198 ~~~~~--------------h~~~v~~~~~~-----~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~ 257 (383)
T 3ei3_B 198 FKEKL--------------HKAKVTHAEFN-----PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAY 257 (383)
T ss_dssp EEEEC--------------SSSCEEEEEEC-----SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEE
T ss_pred EEecc--------------CCCcEEEEEEC-----CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEE
Confidence 55543 44589999999 8888 99999999999999654322111244444 6999999999
Q ss_pred EcC-CCCEEEEecCCCcEEEEEecCCc
Q 021036 250 WAF-DGCCLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 250 ~~~-~~~~l~s~~~d~~v~iwd~~~~~ 275 (318)
|+| ++.+|++++.|+.|++||++++.
T Consensus 258 ~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 258 FNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp ECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred EcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999 99999999999999999998644
No 52
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1e-29 Score=216.99 Aligned_cols=189 Identities=19% Similarity=0.243 Sum_probs=155.3
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++++.|+++++||+++++.+..+.. |... +.++.|+|.. ++++|++|+.||.|
T Consensus 166 ~~~l~t~s~D~~v~lwd~~~~~~~~~~~~----h~~~---v~~~~~~~~~----------------~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 166 DMQILTASGDGTCALWDVESGQLLQSFHG----HGAD---VLCLDLAPSE----------------TGNTFVSGGCDKKA 222 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEC----CSSC---EEEEEECCCS----------------SCCEEEEEETTSCE
T ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEcC----CCCC---eEEEEEEeCC----------------CCCEEEEEeCCCeE
Confidence 44689999999999999999876555432 3322 3345555532 24899999999999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
++||+++++ .+..+.+|...|++++| +|++.+|++|+.|++|++||++.++....+..+
T Consensus 223 ~~wd~~~~~--------------~~~~~~~h~~~v~~v~~-------~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~ 281 (354)
T 2pbi_B 223 MVWDMRSGQ--------------CVQAFETHESDVNSVRY-------YPSGDAFASGSDDATCRLYDLRADREVAIYSKE 281 (354)
T ss_dssp EEEETTTCC--------------EEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred EEEECCCCc--------------EEEEecCCCCCeEEEEE-------eCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC
Confidence 999999854 56778899999999999 899999999999999999999987665544322
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCE
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCC 256 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 256 (318)
. +...+.+++|+ |++.+|++|+.|+.|++| |..+++ .+..+.+|...|++++|+|+|++
T Consensus 282 ~------------~~~~~~~~~~s-----~~g~~l~~g~~d~~i~vw--d~~~~~--~~~~l~~h~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 282 S------------IIFGASSVDFS-----LSGRLLFAGYNDYTINVW--DVLKGS--RVSILFGHENRVSTLRVSPDGTA 340 (354)
T ss_dssp T------------CCSCEEEEEEC-----TTSSEEEEEETTSCEEEE--ETTTCS--EEEEECCCSSCEEEEEECTTSSC
T ss_pred C------------cccceeEEEEe-----CCCCEEEEEECCCcEEEE--ECCCCc--eEEEEECCCCcEEEEEECCCCCE
Confidence 2 12367899999 999999999999999999 555555 56778899999999999999999
Q ss_pred EEEecCCCcEEEEE
Q 021036 257 LYSCSQDNFVRSWI 270 (318)
Q Consensus 257 l~s~~~d~~v~iwd 270 (318)
|++|+.|++|++|+
T Consensus 341 l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 341 FCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEecC
Confidence 99999999999995
No 53
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2e-30 Score=218.03 Aligned_cols=198 Identities=16% Similarity=0.182 Sum_probs=153.4
Q ss_pred CCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC--C
Q 021036 69 SSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN--P 146 (318)
Q Consensus 69 ~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~--~ 146 (318)
.+|..+|.+++|++++++|++|+.|++|+|||+.+++ ...+..+.+|.+.|++++| ++ +
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~------------~~~~~~l~gH~~~V~~v~~-------~~~~~ 70 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG------------QILIADLRGHEGPVWQVAW-------AHPMY 70 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE------------EEEEEEEECCSSCEEEEEE-------CCGGG
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC------------cEEEEEEcCCCccEEEEEe-------CCCCC
Confidence 4577777777777777999999999999999998754 2356778999999999999 54 4
Q ss_pred CcEEEEEeCCCcEEEEECCCcc--eeeeecccccccccceeeeeecccceeEEEEeeccCCCC--ceEEEEEeCCCcEEE
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR--LMLLAVGKGSGSFDL 222 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~--~~~l~~~~~dg~i~v 222 (318)
+++|++|+.|++|++||+++++ ....+. .|...|.+++|+ |+ +.+|++|+.|+.|++
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~--------------~h~~~V~~v~~~-----p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGTWEKSHEHA--------------GHDSSVNSVCWA-----PHDYGLILACGSSDGAISL 131 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSCCCEEEEEC--------------CCSSCCCEEEEC-----CTTTCSCEEEECSSSCEEE
T ss_pred CCEEEEEECCCEEEEEECCCCcceEEEEcc--------------CCCCceEEEEEC-----CCCCCcEEEEEcCCCCEEE
Confidence 7899999999999999998764 222332 355589999999 76 789999999999999
Q ss_pred eeeccCCCeeeEeeeeecccCceeEEEEcCC-----------------CCEEEEecCCCcEEEEEecCCce-eeeecCCC
Q 021036 223 WKCDISCNKFDKVGSYNAHDQVVTGLAWAFD-----------------GCCLYSCSQDNFVRSWIFHGNSL-SQVSIPTN 284 (318)
Q Consensus 223 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----------------~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~ 284 (318)
|++.... .+.....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.... ...
T Consensus 132 wd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~----- 205 (316)
T 3bg1_A 132 LTYTGEG-QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE----- 205 (316)
T ss_dssp EEECSSS-CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEE-----
T ss_pred EecCCCC-CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcccee-----
Confidence 9653221 23334556789999999999997 46899999999999999975421 111
Q ss_pred CCCccccccCCCcceeeeEEEEcCCC----cEEEEEe
Q 021036 285 TPGLQSCTDLPDAFVSCLGMAVSPGN----LVVAMVQ 317 (318)
Q Consensus 285 ~~~~~~~~~~~~h~~~v~~v~~sp~~----~~l~~~~ 317 (318)
..+.+|...|++++|+|++ .+||++.
T Consensus 206 -------~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 206 -------QKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp -------ECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred -------eecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 1344577899999999986 7888874
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=1.2e-29 Score=221.25 Aligned_cols=233 Identities=10% Similarity=0.116 Sum_probs=173.3
Q ss_pred CCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCC
Q 021036 15 SNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSG 94 (318)
Q Consensus 15 ~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg 94 (318)
.+...+++++.|+.+++||+.+++....+. .|... +.+++|+|++ ++|++|+.||
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~h~~~---v~~~~~~~~~------------------~~l~s~s~d~ 161 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQ----AHVSE---ITKLKFFPSG------------------EALISSSQDM 161 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETT----SSSSC---EEEEEECTTS------------------SEEEEEETTS
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeecc----cccCc---cEEEEECCCC------------------CEEEEEeCCC
Confidence 455678999999999999998765432221 13332 3346666655 9999999999
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
.|++||+.+++ .+..+.+|...|.+++| ++++++|++++.|++|++||+++++....+.
T Consensus 162 ~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~-------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 162 QLKIWSVKDGS--------------NPRTLIGHRATVTDIAI-------IDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp EEEEEETTTCC--------------CCEEEECCSSCEEEEEE-------ETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eEEEEeCCCCc--------------CceEEcCCCCcEEEEEE-------cCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 99999999854 45677899999999999 8899999999999999999999998888776
Q ss_pred ccccccccceee----------eeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee-ecccC
Q 021036 175 AHCVPFSLLKEV----------VTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY-NAHDQ 243 (318)
Q Consensus 175 ~~~~~~~~~~~~----------~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~h~~ 243 (318)
.+..+...+... ...+...+.+++|+ |++++|++|+.||.|++| |.++.+ .+..+ ..|..
T Consensus 221 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s-----~~~~~l~~~~~dg~i~i~--d~~~~~--~~~~~~~~~~~ 291 (420)
T 3vl1_A 221 RKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG-----TYGKYVIAGHVSGVITVH--NVFSKE--QTIQLPSKFTC 291 (420)
T ss_dssp BTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS-----CTTEEEEEEETTSCEEEE--ETTTCC--EEEEECCTTSS
T ss_pred cCCCCCCCccEEEEecCCcceeeecccCcccceEEc-----CCCCEEEEEcCCCeEEEE--ECCCCc--eeEEcccccCC
Confidence 543221111110 11123456666677 899999999999999999 555554 33333 45889
Q ss_pred ceeEEEEcCCCC-EEEEecCCCcEEEEEecCCce--eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 244 VVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSL--SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 244 ~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.|.+++|+|++. +|++++.||.|++||++++.. ..+..+ |...|.++.| +++++|+++.
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~v~~~~~-~~~~~l~s~~ 353 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN--------------EGTPINNVYF-AAGALFVSSG 353 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES--------------TTSCEEEEEE-ETTEEEEEET
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc--------------CCCCceEEEe-CCCCEEEEec
Confidence 999999999998 999999999999999987543 333322 2347788755 5778888873
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.4e-29 Score=216.33 Aligned_cols=239 Identities=13% Similarity=0.131 Sum_probs=177.5
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++|+.|+.|++||+.+++.+..+.. |... +.+++|+|. ++++|++|+.||.|
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~----~~~~---i~~~~~~~~-----------------~~~~l~s~~~dg~i 140 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVG----HGNA---INELKFHPR-----------------DPNLLLSVSKDHAL 140 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEES----CCSC---EEEEEECSS-----------------CTTEEEEEETTSCE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecC----CCCc---EEEEEECCC-----------------CCCEEEEEeCCCeE
Confidence 35689999999999999998776444432 3333 444777772 24999999999999
Q ss_pred EEEEccCCccccccccccCCceeEEeee---ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLF---QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
++||+.+++ .+..+ .+|...|.+++| ++++++|++++.||.|++||+++++....+
T Consensus 141 ~iwd~~~~~--------------~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 141 RLWNIQTDT--------------LVAIFGGVEGHRDEVLSADY-------DLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EEEETTTTE--------------EEEEECSTTSCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred EEEEeecCe--------------EEEEecccccccCceeEEEE-------CCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 999999854 44455 789999999999 899999999999999999999987655433
Q ss_pred cccc------c--cc------ccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCC---------
Q 021036 174 EAHC------V--PF------SLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCN--------- 230 (318)
Q Consensus 174 ~~~~------~--~~------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~--------- 230 (318)
.... . .+ .........|...|.+++|+ ++++++++.||.|++|++.....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 272 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-------GDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 272 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-------TTEEEEECSSSEEEEEEESSTTCCGGGCCTTC
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-------CCEEEEEecCCEEEEEeCCCccccccccccCC
Confidence 3200 0 00 00011223377789999996 46999999999999996543221
Q ss_pred -eeeEeeeeecccCceeEEEEcCC--CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCC--cceeeeEEE
Q 021036 231 -KFDKVGSYNAHDQVVTGLAWAFD--GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPD--AFVSCLGMA 305 (318)
Q Consensus 231 -~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~v~ 305 (318)
....+..+.+|...|++++|+|+ +++|++++.||.|++||+.++....... ..+.+ |...|.+++
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----------~~~~~~~~~~~v~~~~ 342 (366)
T 3k26_A 273 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC----------TTLTHHKCGAAIRQTS 342 (366)
T ss_dssp CCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE----------EEECCTTCCSCEEEEE
T ss_pred cchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc----------eEEcccccCCceEEEE
Confidence 11357778889999999999999 9999999999999999998865331000 01111 256999999
Q ss_pred EcCCCcEEEEEe
Q 021036 306 VSPGNLVVAMVQ 317 (318)
Q Consensus 306 ~sp~~~~l~~~~ 317 (318)
|+|++++|+++.
T Consensus 343 ~s~~~~~l~s~~ 354 (366)
T 3k26_A 343 FSRDSSILIAVC 354 (366)
T ss_dssp ECTTSSEEEEEE
T ss_pred eCCCCCeEEEEe
Confidence 999999999874
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1.7e-29 Score=218.47 Aligned_cols=256 Identities=17% Similarity=0.093 Sum_probs=186.2
Q ss_pred cceEEeeCCCceeEeecCCCC------CCCceecchhccccccccceeeeeccc----c---c-----------------
Q 021036 18 HPTVAASKSKGNSITKIPSNC------CLPLITADQYASRSAMLHSLAVAWSPV----L---R----------------- 67 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~w~p~----~---~----------------- 67 (318)
..+++++.|+.|++||+.+++ ....+.. |... +.+++|+|+ + .
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~----h~~~---v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~ 99 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV----HKSG---LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT 99 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC----CTTC---EEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEE
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEec----CCCc---EEEEEEecccccCCccccEEEEEcCCCCEEEEEcc
Confidence 678999999999999999877 2222221 2222 333555544 3 1
Q ss_pred ------------CCCC-----cccccccCCC----CCccE-EEEecCCCcEEEEEccC------CccccccccccCCcee
Q 021036 68 ------------LSSK-----KYPVPQNGSS----NWFSI-LAVGGRSGKVSLWRICV------PKCYSVEDCKVPTTAV 119 (318)
Q Consensus 68 ------------~~~~-----~~~v~~~~~s----~~~~~-l~~g~~dg~i~iw~~~~------~~~~~~~~~~~~~~~~ 119 (318)
+..| ..+|.+++++ +++++ |++++.||.|++||+.+ ++... ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~ 170 (397)
T 1sq9_A 100 REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN---------WS 170 (397)
T ss_dssp ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC---------CC
T ss_pred CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee---------cc
Confidence 2345 5889999999 99999 99999999999999987 44321 11
Q ss_pred EEeee-------ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeec--
Q 021036 120 LIGLF-------QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVN-- 190 (318)
Q Consensus 120 ~~~~~-------~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 190 (318)
....+ ..|...|.+++| ++++ +|++++.|+.|++||+++++....+... ..|
T Consensus 171 ~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~h~~ 231 (397)
T 1sq9_A 171 PTLELQGTVESPMTPSQFATSVDI-------SERG-LIATGFNNGTVQISELSTLRPLYNFESQ-----------HSMIN 231 (397)
T ss_dssp CEEEEEEEECCSSSSCCCCCEEEE-------CTTS-EEEEECTTSEEEEEETTTTEEEEEEECC-----------C---C
T ss_pred CcceeeeeeccccCCCCCceEEEE-------CCCc-eEEEEeCCCcEEEEECCCCceeEEEecc-----------ccccc
Confidence 11134 458899999999 8899 9999999999999999988877766540 012
Q ss_pred -ccceeEEEEeeccCCCCceEEEEEeCC---CcEEEeeeccCCCeeeEeeeeec-------------ccCceeEEEEcCC
Q 021036 191 -TVPISVLSLILPVQSPRLMLLAVGKGS---GSFDLWKCDISCNKFDKVGSYNA-------------HDQVVTGLAWAFD 253 (318)
Q Consensus 191 -~~~v~~l~~~~~~~~~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~ 253 (318)
...|.+++|+ |++.+|++++.| |.|++| +.++.+ .+..+.+ |...|.+++|+|+
T Consensus 232 ~~~~i~~i~~~-----~~~~~l~~~~~d~~~g~i~i~--d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 232 NSNSIRSVKFS-----PQGSLLAIAHDSNSFGCITLY--ETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp CCCCEEEEEEC-----SSTTEEEEEEEETTEEEEEEE--ETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred cCCccceEEEC-----CCCCEEEEEecCCCCceEEEE--ECCCCc--ccceeccCcccccccccccccCCcEEEEEECCC
Confidence 4489999999 999999999999 999999 555655 6677777 9999999999999
Q ss_pred CCEEEEecCCCcEEEEEecCCceeeeecCC-CC-C----Cccc-cccCCCcceeeeEEEEcCCC----------cEEEEE
Q 021036 254 GCCLYSCSQDNFVRSWIFHGNSLSQVSIPT-NT-P----GLQS-CTDLPDAFVSCLGMAVSPGN----------LVVAMV 316 (318)
Q Consensus 254 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~-~----~~~~-~~~~~~h~~~v~~v~~sp~~----------~~l~~~ 316 (318)
+++|++++.|+.|++||+++++........ .. . ...+ ......|...|++++|+|++ ++|+++
T Consensus 303 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~ 382 (397)
T 1sq9_A 303 GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV 382 (397)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe
Confidence 999999999999999999887654322200 00 0 0000 00112247899999999998 688887
Q ss_pred e
Q 021036 317 Q 317 (318)
Q Consensus 317 ~ 317 (318)
.
T Consensus 383 ~ 383 (397)
T 1sq9_A 383 C 383 (397)
T ss_dssp E
T ss_pred c
Confidence 4
No 57
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=3.2e-29 Score=214.12 Aligned_cols=242 Identities=12% Similarity=0.098 Sum_probs=170.5
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++|+.|+.+++||+.+......... ..|... +.+++|+|++ ++|++++.||.|
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~--~~h~~~---v~~~~~~~~~------------------~~l~s~~~dg~v 110 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQ--QMHTGP---VLDVCWSDDG------------------SKVFTASCDKTA 110 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEE--EECSSC---EEEEEECTTS------------------SEEEEEETTSEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEe--ccccCC---EEEEEECcCC------------------CEEEEEcCCCcE
Confidence 57799999999999999987322111111 113332 3346666655 999999999999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
++||+++++ .+ .+..|...|.+++|.| ++++.+|++++.|+.|++||+++++....+..+
T Consensus 111 ~iwd~~~~~--------------~~-~~~~~~~~v~~~~~~~-----~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 111 KMWDLSSNQ--------------AI-QIAQHDAPVKTIHWIK-----APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp EEEETTTTE--------------EE-EEEECSSCEEEEEEEE-----CSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred EEEEcCCCC--------------ce-eeccccCceEEEEEEe-----CCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 999999754 22 3567999999999944 467889999999999999999988877666544
Q ss_pred ccccccc---------------------------eeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC
Q 021036 177 CVPFSLL---------------------------KEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 177 ~~~~~~~---------------------------~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 229 (318)
....... ..........+.++.+..... .....+++++.||.|++|+++...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 171 ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQ-NKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTT-SCEEEEEEEETTSEEEEEESSCSC
T ss_pred CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCC-CCCCeEEEecCCCcEEEEecCCCC
Confidence 3211100 011111223445555552111 122449999999999999654432
Q ss_pred CeeeEeeeeecccC------------ceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCc
Q 021036 230 NKFDKVGSYNAHDQ------------VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDA 297 (318)
Q Consensus 230 ~~~~~~~~~~~h~~------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 297 (318)
.. ..+..+.+|.. .|++++|+|++++|++++.||.|++||+.++.... .+.+|
T Consensus 250 ~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~--------------~~~~~ 314 (368)
T 3mmy_A 250 PA-KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK--------------TSEQL 314 (368)
T ss_dssp HH-HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE--------------ECCCC
T ss_pred cc-ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE--------------EecCC
Confidence 20 24556666665 79999999999999999999999999999876543 22345
Q ss_pred ceeeeEEEEcCCCcEEEEEe
Q 021036 298 FVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 298 ~~~v~~v~~sp~~~~l~~~~ 317 (318)
...|.+++|+|+|++|+++.
T Consensus 315 ~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 315 DQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp SSCEEEEEECTTSSCEEEEE
T ss_pred CCCceEEEECCCCCeEEEEe
Confidence 67999999999999999874
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2e-28 Score=212.17 Aligned_cols=256 Identities=14% Similarity=0.142 Sum_probs=183.9
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCC-CccEEEEe
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSN-WFSILAVG 90 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~-~~~~l~~g 90 (318)
+.+.+...+++++.|+.|++||+.+++....+..... .-.+.....+|..+|.++++++ ++++|+++
T Consensus 51 ~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 51 IEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV------------CSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp ECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEE------------EEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred EecCCCCEEEEEcCCCeEEEEECCCCcccceEecccc------------ccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 4443567789999999999999999877666543211 0011112334666666666666 56899999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCccee
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
+.||.|++||+.+++ ....+. +...+.++.|.|. .+++.++++++.|+.|++||+++++..
T Consensus 119 ~~d~~i~iwd~~~~~--------------~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQ--------------TADVFN-FEETVYSHHMSPV----STKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp ETTSEEEEEETTTTE--------------EEEEEE-CSSCEEEEEECSS----CSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred eCCCeEEEeeCCCCc--------------cceecc-CCCceeeeEeecC----CCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 999999999999854 334443 6778999999443 235569999999999999999988877
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCeeeE------------eee
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNKFDK------------VGS 237 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~------------~~~ 237 (318)
..+..+. ..|.+++|+ |++. +|++|+.||.|++||+......... ...
T Consensus 180 ~~~~~~~--------------~~v~~~~~~-----~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 180 HILQGHR--------------QEILAVSWS-----PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp EEECCCC--------------SCEEEEEEC-----SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred eeecCCC--------------CcEEEEEEC-----CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 7665443 489999999 8887 6999999999999964332211101 111
Q ss_pred eecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCC----------------CCCcc------------
Q 021036 238 YNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTN----------------TPGLQ------------ 289 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~----------------~~~~~------------ 289 (318)
..+|...|.+++|+|++.+|++++.|+.|++||+.++.......... ...+.
T Consensus 241 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d 320 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT 320 (408)
T ss_dssp SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence 25688999999999999999999999999999998755432111000 00000
Q ss_pred -----ccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 290 -----SCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 290 -----~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
....+.+|...|.+++|+|++++|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 321 VYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC
Confidence 0112347899999999999999999884
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2e-29 Score=214.68 Aligned_cols=264 Identities=11% Similarity=0.066 Sum_probs=183.4
Q ss_pred CcCCCCCccceEEeeC---CCceeEeecCCCCCCCceecchhccccccccceeeeecccc---c----------------
Q 021036 10 NKMKDSNTHPTVAASK---SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVL---R---------------- 67 (318)
Q Consensus 10 ~~~~~~~~~~~~t~s~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~---~---------------- 67 (318)
-.+.+.+...+++++. |+.+++||+.+++....... .|... +.+++|+|+. .
T Consensus 24 ~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~---~~~~~---v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 24 CKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI---EKAKP---IKCGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp EEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE---EESSC---EEEEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred EEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee---cccCc---EEEEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 3445545556667776 99999999998765433221 23332 3345555541 1
Q ss_pred ---------CCCCccccccc------CCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecccc----
Q 021036 68 ---------LSSKKYPVPQN------GSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN---- 128 (318)
Q Consensus 68 ---------~~~~~~~v~~~------~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---- 128 (318)
+..|..+|.++ ++++++++|++++.||.|++||+.+++. .+..+..|.
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-------------~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 98 EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-------------PVANMEPVQGENK 164 (357)
T ss_dssp TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-------------CSEEECCCTTSCC
T ss_pred CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-------------cceeccccCCCCC
Confidence 34577888888 6788999999999999999999998642 234444443
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC--
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-- 206 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-- 206 (318)
..|.++.|.+.. ++++++|++++.|+.|++||+++++.... ..+...|.+++|+ |
T Consensus 165 ~~v~~~~~~~~~---~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---------------~~~~~~v~~~~~~-----~~~ 221 (357)
T 3i2n_A 165 RDCWTVAFGNAY---NQEERVVCAGYDNGDIKLFDLRNMALRWE---------------TNIKNGVCSLEFD-----RKD 221 (357)
T ss_dssp CCEEEEEEECCC---C-CCCEEEEEETTSEEEEEETTTTEEEEE---------------EECSSCEEEEEES-----CSS
T ss_pred CceEEEEEEecc---CCCCCEEEEEccCCeEEEEECccCceeee---------------cCCCCceEEEEcC-----CCC
Confidence 389999842211 68899999999999999999998775433 2244589999999 8
Q ss_pred -CceEEEEEeCCCcEEEeeeccCCCeee---EeeeeecccCceeEEEEcCCCC-EEEEecCCCcEEEEEecCCceeeeec
Q 021036 207 -RLMLLAVGKGSGSFDLWKCDISCNKFD---KVGSYNAHDQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLSQVSI 281 (318)
Q Consensus 207 -~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~ 281 (318)
++.+|++++.||.|++|++. +.+.. ....+.+|...|++++|+|++. +|++++.||.|++||++.+.......
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMR--TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEE--EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCEEEEECCCCeEEEEeCc--CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 89999999999999999654 33210 1123448999999999999998 89999999999999998754332111
Q ss_pred CCCC-CCcc----ccccCCCcceeeeEEEEcCCCcEEE-EEe
Q 021036 282 PTNT-PGLQ----SCTDLPDAFVSCLGMAVSPGNLVVA-MVQ 317 (318)
Q Consensus 282 ~~~~-~~~~----~~~~~~~h~~~v~~v~~sp~~~~l~-~~~ 317 (318)
.... .... ....+.+|...|.+++|+|++++|+ ++.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred CCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 1100 0000 1123456888999999999999887 553
No 60
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.6e-29 Score=217.29 Aligned_cols=223 Identities=12% Similarity=0.084 Sum_probs=168.7
Q ss_pred EEeeCCCceeEeecCCCCCC-CceecchhccccccccceeeeecccccCCCCcccccccCCCC-CccEEEEecCCCcEEE
Q 021036 21 VAASKSKGNSITKIPSNCCL-PLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSN-WFSILAVGGRSGKVSL 98 (318)
Q Consensus 21 ~t~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~-~~~~l~~g~~dg~i~i 98 (318)
++++.||.|++|++...... ..+. .+.+|..+|.++++++ ++++|++|+.||.|++
T Consensus 51 ~~~~~~g~i~v~~~~~~~~~~~~~~----------------------~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~v 108 (402)
T 2aq5_A 51 CEASGGGAFLVLPLGKTGRVDKNVP----------------------LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMV 108 (402)
T ss_dssp BCCSSSCCEEEEETTCCEECCTTCC----------------------CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred EEEcCCCEEEEEECccCCCCCCCCc----------------------eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 45789999999999664321 1111 1223444444444444 4599999999999999
Q ss_pred EEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC-cEEEEEeCCCcEEEEECCCcceeeee--cc
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ-VLLVTGSSDGSVRIWDGYIQELQKSA--EA 175 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~--~~ 175 (318)
|++.++.... ...+.+..+.+|...|.+++| ++++ .+|++++.|+.|++||+++++....+ ..
T Consensus 109 w~~~~~~~~~-------~~~~~~~~~~~h~~~v~~~~~-------~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 174 (402)
T 2aq5_A 109 WEIPDGGLVL-------PLREPVITLEGHTKRVGIVAW-------HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV 174 (402)
T ss_dssp EECCTTCCSS-------CBCSCSEEEECCSSCEEEEEE-------CSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT
T ss_pred EEccCCCCcc-------ccCCceEEecCCCCeEEEEEE-------CcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC
Confidence 9998763210 001345678899999999999 8887 69999999999999999998877766 43
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee-ecccCc-eeEEEEcCC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY-NAHDQV-VTGLAWAFD 253 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~ 253 (318)
+ ...|.+++|+ |++.+|++++.||.|++| |.++++ .+..+ .+|.+. +.++.|+|+
T Consensus 175 ~--------------~~~v~~~~~~-----~~~~~l~~~~~d~~i~iw--d~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 175 H--------------PDTIYSVDWS-----RDGALICTSCRDKRVRVI--EPRKGT--VVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp C--------------CSCEEEEEEC-----TTSSCEEEEETTSEEEEE--ETTTTE--EEEEEECSSCSSSCCEEEECST
T ss_pred C--------------CCceEEEEEC-----CCCCEEEEEecCCcEEEE--eCCCCc--eeeeeccCCCCCcceEEEEcCC
Confidence 3 3489999999 999999999999999999 566666 56666 677765 899999999
Q ss_pred CCEEEEe---cCCCcEEEEEecCCce-eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 254 GCCLYSC---SQDNFVRSWIFHGNSL-SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 254 ~~~l~s~---~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+.+|++| +.|+.|++||+++... ....... |...+.+++|+|++++|++
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELD-------------TSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC-------------CCSSCEEEEEETTTTEEEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEecc-------------CCCceeEEEEcCCCCEEEE
Confidence 9999999 8999999999987543 2111111 3347899999999998864
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.9e-29 Score=217.06 Aligned_cols=231 Identities=16% Similarity=0.134 Sum_probs=171.6
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCc-cEEEEe
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWF-SILAVG 90 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~-~~l~~g 90 (318)
+.+.+...+++|+.|++|++||+.++........ +...+.+|...|.++++++++ ++|++|
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~------------------~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLRE------------------PVITLEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCS------------------CSEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCC------------------ceEEecCCCCeEEEEEECcCCCCEEEEE
Confidence 3333667889999999999999998754322110 011122344444444555544 699999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeee--ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcc
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF--QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQE 168 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 168 (318)
+.||.|++||+.+++ .+..+ .+|...|.+++| ++++++|++++.|+.|++||+++++
T Consensus 151 ~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 151 GCDNVILVWDVGTGA--------------AVLTLGPDVHPDTIYSVDW-------SRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp ETTSCEEEEETTTTE--------------EEEEECTTTCCSCEEEEEE-------CTTSSCEEEEETTSEEEEEETTTTE
T ss_pred cCCCEEEEEECCCCC--------------ccEEEecCCCCCceEEEEE-------CCCCCEEEEEecCCcEEEEeCCCCc
Confidence 999999999999853 55667 789999999999 8899999999999999999999988
Q ss_pred eeeee-cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEE---eCCCcEEEeeeccCCCeeeEeeee-ecccC
Q 021036 169 LQKSA-EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG---KGSGSFDLWKCDISCNKFDKVGSY-NAHDQ 243 (318)
Q Consensus 169 ~~~~~-~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~---~~dg~i~vw~~~~~~~~~~~~~~~-~~h~~ 243 (318)
....+ ..+.. ..+..+.|+ |++.+|++| +.|+.|++|| .+.... ++... ..|..
T Consensus 210 ~~~~~~~~~~~-------------~~~~~~~~~-----~~~~~l~~g~~~~~d~~i~iwd--~~~~~~-~~~~~~~~~~~ 268 (402)
T 2aq5_A 210 VVAEKDRPHEG-------------TRPVHAVFV-----SEGKILTTGFSRMSERQVALWD--TKHLEE-PLSLQELDTSS 268 (402)
T ss_dssp EEEEEECSSCS-------------SSCCEEEEC-----STTEEEEEEECTTCCEEEEEEE--TTBCSS-CSEEEECCCCS
T ss_pred eeeeeccCCCC-------------CcceEEEEc-----CCCcEEEEeccCCCCceEEEEc--CccccC-CceEEeccCCC
Confidence 77766 44432 147899999 999999999 7999999995 444331 12222 24677
Q ss_pred ceeEEEEcCCCCEEE-EecCCCcEEEEEecCCc--eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 244 VVTGLAWAFDGCCLY-SCSQDNFVRSWIFHGNS--LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 244 ~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.+.+++|+|++++|+ +++.|+.|++||+.++. ...+..+. |...|.+++|+|++.++++
T Consensus 269 ~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-------------~~~~v~~~~~sp~~~~~~s 330 (402)
T 2aq5_A 269 GVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-------------SKESQRGMGYMPKRGLEVN 330 (402)
T ss_dssp SCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-------------CSSCCSEEEECCGGGSCGG
T ss_pred ceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-------------cCCcccceEEeccccccee
Confidence 899999999999886 56689999999999876 33333222 2348899999999887654
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=9e-30 Score=217.50 Aligned_cols=244 Identities=16% Similarity=0.148 Sum_probs=178.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhc-cccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYA-SRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSG 94 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg 94 (318)
....+++++.++.+++||+.+++.+..+...... +.. .+.+++|+|+. ..++++|++|+.||
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~--------------~~~~~~l~~~~~dg 95 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADE---NFYTCAWTYDS--------------NTSHPLLAVAGSRG 95 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTC---CEEEEEEEECT--------------TTCCEEEEEEETTC
T ss_pred CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCC---cEEEEEeccCC--------------CCCCCEEEEecCCC
Confidence 3455777788889999999987765555432111 222 24557888773 01137999999999
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
.|++||+.++ +.+..+.+|...|.+++| ++ ++++|++++.||.|++||+++++....+
T Consensus 96 ~i~v~d~~~~--------------~~~~~~~~~~~~i~~~~~-------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 96 IIRIINPITM--------------QCIKHYVGHGNAINELKF-------HPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEECTTTC--------------CEEEEEESCCSCEEEEEE-------CSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEchhc--------------eEeeeecCCCCcEEEEEE-------CCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 9999999984 456778899999999999 77 8899999999999999999988877665
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeee--------------------
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFD-------------------- 233 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~-------------------- 233 (318)
... ..|...|.+++|+ |++.+|++++.||.|++|| .++.+..
T Consensus 155 ~~~-----------~~~~~~v~~~~~~-----~~~~~l~~~~~dg~i~i~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (366)
T 3k26_A 155 GGV-----------EGHRDEVLSADYD-----LLGEKIMSCGMDHSLKLWR--INSKRMMNAIKESYDYNPNKTNRPFIS 216 (366)
T ss_dssp CST-----------TSCSSCEEEEEEC-----TTSSEEEEEETTSCEEEEE--SCSHHHHHHHHHHHTCCGGGCSSCCCC
T ss_pred ccc-----------ccccCceeEEEEC-----CCCCEEEEecCCCCEEEEE--CCCCccccccceeEEecCCCCcccccc
Confidence 211 1244589999999 9999999999999999995 4443210
Q ss_pred ------EeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc
Q 021036 234 ------KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS 307 (318)
Q Consensus 234 ------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 307 (318)
......+|...|.+++|+ +.+|++++.|+.|++||+.+....................+..|...|.+++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 217 QKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp EEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred eeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 011223489999999999 779999999999999999875442211111111111122344677789999999
Q ss_pred CC--CcEEEEEe
Q 021036 308 PG--NLVVAMVQ 317 (318)
Q Consensus 308 p~--~~~l~~~~ 317 (318)
|+ +++|++|.
T Consensus 295 ~~~~~~~l~~~~ 306 (366)
T 3k26_A 295 MDFWQKMLALGN 306 (366)
T ss_dssp ECTTSSEEEEEC
T ss_pred CCCCCcEEEEEe
Confidence 99 99999874
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.3e-28 Score=215.08 Aligned_cols=233 Identities=20% Similarity=0.270 Sum_probs=175.7
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEE
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLW 99 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw 99 (318)
+++.+.|++|++||+.++++.+.+.... |... +.+++|+|++ ++|++|+.||.|+||
T Consensus 118 ~lAvgld~tV~lWd~~tg~~~~~~~~~~--~~~~---V~sv~fspdg------------------~~lasgs~Dg~v~iW 174 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSGDILQLLQMEQ--PGEY---ISSVAWIKEG------------------NYLAVGTSSAEVQLW 174 (420)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCS--TTCC---EEEEEECTTS------------------SEEEEEETTSCEEEE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecC--CCCc---EEEEEECCCC------------------CEEEEEECCCeEEEE
Confidence 4555669999999999998766554322 3332 4457777766 999999999999999
Q ss_pred EccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce-eeeeccccc
Q 021036 100 RICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL-QKSAEAHCV 178 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~ 178 (318)
|++++ +.++.+.+|...+.++.| ++.+|++|+.|+.+++||...... ...+.
T Consensus 175 d~~~~--------------~~~~~~~~h~~~v~~~s~---------~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~---- 227 (420)
T 4gga_A 175 DVQQQ--------------KRLRNMTSHSARVGSLSW---------NSYILSSGSRSGHIHHHDVRVAEHHVATLS---- 227 (420)
T ss_dssp ETTTT--------------EEEEEECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEETTSSSCEEEEEE----
T ss_pred EcCCC--------------cEEEEEeCCCCceEEEee---------CCCEEEEEeCCCceeEeeecccceeeEEec----
Confidence 99984 467788999999999988 357899999999999999886533 33333
Q ss_pred ccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC-EE
Q 021036 179 PFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC-CL 257 (318)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 257 (318)
.|...+..+.++ |++.++++++.|+.+++|+..........+.....|...|.+++|+|.+. ++
T Consensus 228 ----------~h~~~~~~~~~~-----~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~l 292 (420)
T 4gga_A 228 ----------GHSQEVCGLRWA-----PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 292 (420)
T ss_dssp ----------CCSSCEEEEEEC-----TTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEE
T ss_pred ----------ccccceeeeeec-----CCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEE
Confidence 345588999998 99999999999999999965433333334566778999999999999755 55
Q ss_pred EE--ecCCCcEEEEEecCCceeee----------ecCCCCCCcc---cc----------------ccCCCcceeeeEEEE
Q 021036 258 YS--CSQDNFVRSWIFHGNSLSQV----------SIPTNTPGLQ---SC----------------TDLPDAFVSCLGMAV 306 (318)
Q Consensus 258 ~s--~~~d~~v~iwd~~~~~~~~~----------~~~~~~~~~~---~~----------------~~~~~h~~~v~~v~~ 306 (318)
++ |+.|++|++||+.++..... .+.+....++ +. ..+.+|.+.|++++|
T Consensus 293 a~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~ 372 (420)
T 4gga_A 293 ATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 372 (420)
T ss_dssp EEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 54 56899999999987654321 1222222222 11 124589999999999
Q ss_pred cCCCcEEEEEe
Q 021036 307 SPGNLVVAMVQ 317 (318)
Q Consensus 307 sp~~~~l~~~~ 317 (318)
+|||++|++|.
T Consensus 373 spdg~~l~S~s 383 (420)
T 4gga_A 373 SPDGATVASAA 383 (420)
T ss_dssp CTTSSCEEEEE
T ss_pred cCCCCEEEEEe
Confidence 99999999984
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.9e-29 Score=216.37 Aligned_cols=246 Identities=12% Similarity=0.044 Sum_probs=175.3
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCce-ecchhccccccccceeeeecccccCCCCcccccccCCCCC-ccEEEE
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLI-TADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNW-FSILAV 89 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~-~~~l~~ 89 (318)
+.+.+...+++++.|+.|++||+.+++..... ..... .....|..+|.+++++++ +.+|++
T Consensus 121 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-----------------~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP-----------------GQSMSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp ECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC-----------------CCSCCSSCCCCEEEECSSCTTEEEE
T ss_pred EcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc-----------------ccccCCCCCeeEEEeCCCCCcEEEE
Confidence 33334677899999999999999987621110 00000 011223333444444444 589999
Q ss_pred ecCCCcEEEEEccCCccccccccccCCceeEEeeeccc------cccEEEEEeeeecCCCCCCC-cEEEEEeCCC---cE
Q 021036 90 GGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH------NSWITSISLAVLSSDSSNPQ-VLLVTGSSDG---SV 159 (318)
Q Consensus 90 g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~~~~~-~~l~s~~~d~---~v 159 (318)
++.||.|++||+++++ .+..+..| ...|.+++| ++++ .+|++++.|+ .|
T Consensus 184 ~~~dg~v~iwd~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 184 AGSSNFASIWDLKAKK--------------EVIHLSYTSPNSGIKQQLSVVEW-------HPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp ESSSSCEEEEETTTTE--------------EEEEECCCCCSSCCCCCEEEEEE-------CSSCTTEEEEEECCSSSCCC
T ss_pred EcCCCCEEEEECCCCC--------------cceEEeccccccccCCceEEEEE-------CCCCCCEEEEEECCCCCceE
Confidence 9999999999999854 44455554 789999999 7776 6999999998 99
Q ss_pred EEEECCCc-ceeeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeeeccCCCeeeEeee
Q 021036 160 RIWDGYIQ-ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKCDISCNKFDKVGS 237 (318)
Q Consensus 160 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 237 (318)
++||++++ +....+. ..|...|.+++|+ | ++.+|++++.||.|++| +.++++ ++..
T Consensus 243 ~~~d~~~~~~~~~~~~-------------~~~~~~v~~~~~s-----~~~~~~l~s~~~dg~v~~w--d~~~~~--~~~~ 300 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLN-------------QGHQKGILSLDWC-----HQDEHLLLSSGRDNTVLLW--NPESAE--QLSQ 300 (416)
T ss_dssp CEEETTSTTSCSBCCC-------------SCCSSCEEEEEEC-----SSCSSCEEEEESSSEEEEE--CSSSCC--EEEE
T ss_pred EEEeCCCCCCCcEEee-------------cCccCceeEEEeC-----CCCCCeEEEEeCCCCEEEe--eCCCCc--ccee
Confidence 99999986 3444443 0344589999999 7 89999999999999999 566665 6778
Q ss_pred eecccCceeEEEEcCCC-CEEEEecCCCcEEEEEecCCceeeeecC-------------CCCCCcc--------ccccCC
Q 021036 238 YNAHDQVVTGLAWAFDG-CCLYSCSQDNFVRSWIFHGNSLSQVSIP-------------TNTPGLQ--------SCTDLP 295 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~-------------~~~~~~~--------~~~~~~ 295 (318)
+.+|...|.+++|+|++ .+|++++.|+.|++||+.+......... .....++ ......
T Consensus 301 ~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (416)
T 2pm9_A 301 FPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPT 380 (416)
T ss_dssp EECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCS
T ss_pred ecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCc
Confidence 88999999999999998 7999999999999999987543221100 0000000 001112
Q ss_pred CcceeeeEEEEcCCCcEEEEEe
Q 021036 296 DAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 296 ~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.|..++.+++|+|||++||++.
T Consensus 381 ~~~~~~~~~~~s~dg~~la~~~ 402 (416)
T 2pm9_A 381 WYGEPSPAAHWAFGGKLVQITP 402 (416)
T ss_dssp TTCCCSCCCEEETTTEEECBCT
T ss_pred cccCCccceEEeeCCeEEEEeC
Confidence 3677888999999999999864
No 65
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-28 Score=210.00 Aligned_cols=224 Identities=11% Similarity=0.057 Sum_probs=162.3
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+.+.+++|+.|++|++||+.+++.+..+.. .+|.++.+++. +++++.|++
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~---------------------------~~v~~~~~~~~---~~s~s~D~~ 96 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITT---------------------------PNPRTGGEHPA---IISRGPCNR 96 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEE---------------------------ECCCTTCCCCS---EEEECSTTE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEec---------------------------CCceeeeeCCc---eEEecCCCe
Confidence 456689999999999999998876544431 22334444444 899999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeee-ccccccEEEEEeeeecCCCCC--CCcEEEEEeCCCcEEEEECCCcceeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLF-QAHNSWITSISLAVLSSDSSN--PQVLLVTGSSDGSVRIWDGYIQELQKS 172 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~ 172 (318)
|++|+....... ......+.++.+ .+|.++|.+++| ++ ++++|++++.||+|++||+++++....
T Consensus 97 i~~w~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 97 LLLLYPGNQITI-----LDSKTNKVLREIEVDSANEIIYMYG-------HNEVNTEYFIWADNRGTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEEETTTEEEE-----EETTTCCEEEEEECCCSSCEEEEEC-------CC---CCEEEEEETTCCEEEEESSSSCEEEE
T ss_pred EEEEEccCceEE-----eecCCcceeEEeecCCCCCEEEEEc-------CCCCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 999987642100 000002223333 367789999999 78 899999999999999999998887554
Q ss_pred ecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe-eeeec-ccCceeEEEE
Q 021036 173 AEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV-GSYNA-HDQVVTGLAW 250 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~-h~~~v~~~~~ 250 (318)
...+ +...+.+++|+ |++.+|++|+.||.|++| |.++++ .+ ..+.. |...|++++|
T Consensus 165 ~~~~-------------~~~~i~~~~~~-----pdg~~lasg~~dg~i~iw--d~~~~~--~~~~~~~~~h~~~v~~l~f 222 (343)
T 3lrv_A 165 HSAK-------------SDVEYSSGVLH-----KDSLLLALYSPDGILDVY--NLSSPD--QASSRFPVDEEAKIKEVKF 222 (343)
T ss_dssp ECCC-------------SSCCCCEEEEC-----TTSCEEEEECTTSCEEEE--ESSCTT--SCCEECCCCTTSCEEEEEE
T ss_pred EecC-------------CCCceEEEEEC-----CCCCEEEEEcCCCEEEEE--ECCCCC--CCccEEeccCCCCEEEEEE
Confidence 4322 23468999999 999999999999999999 555555 33 56677 9999999999
Q ss_pred cCCCCEEEEecCCCcEEEEEecCCceee-eecCCCCCCccccccCCCcceee--eEEEEcCCCcEEEEE
Q 021036 251 AFDGCCLYSCSQDNFVRSWIFHGNSLSQ-VSIPTNTPGLQSCTDLPDAFVSC--LGMAVSPGNLVVAMV 316 (318)
Q Consensus 251 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v--~~v~~sp~~~~l~~~ 316 (318)
+|++.+|++++ |+.|++||+++..... +... ..|...+ .+++|+|+|++|+++
T Consensus 223 s~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 223 ADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTY------------TIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp CTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCC------------BC-----CCEEEEECTTSSEEEEE
T ss_pred eCCCCEEEEEe-CCeEEEEEcCCCCcceeeccc------------ccccccccceEEEECCCCCEEEEe
Confidence 99999999999 4599999998865432 1110 0122233 469999999999985
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.7e-28 Score=210.86 Aligned_cols=214 Identities=17% Similarity=0.212 Sum_probs=170.9
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVS 97 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 97 (318)
..+++++.|+.+++||+.+++....+... +... +.+++|+|++ ++|++|+.||.|+
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~---~~~~---v~~v~~s~~~------------------~~l~~~~~dg~i~ 159 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETD---ESTY---VASVKWSHDG------------------SFLSVGLGNGLVD 159 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECC---TTCC---EEEEEECTTS------------------SEEEEEETTSCEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecC---CCCC---EEEEEECCCC------------------CEEEEECCCCeEE
Confidence 45889999999999999988765444321 2332 4457777766 9999999999999
Q ss_pred EEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC-cceeeeeccc
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-QELQKSAEAH 176 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~ 176 (318)
+||+.++ +.+..+.+|...|.+++| . +++|++++.||.|++||++. +.....+.
T Consensus 160 iwd~~~~--------------~~~~~~~~~~~~v~~~~~-------~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-- 214 (401)
T 4aez_A 160 IYDVESQ--------------TKLRTMAGHQARVGCLSW-------N--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-- 214 (401)
T ss_dssp EEETTTC--------------CEEEEECCCSSCEEEEEE-------E--TTEEEEEETTSEEEEEETTSSSCEEEEEE--
T ss_pred EEECcCC--------------eEEEEecCCCCceEEEEE-------C--CCEEEEEcCCCCEEEEecccCcceeeEEc--
Confidence 9999884 456778899999999999 3 46899999999999999984 44444443
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC-
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC- 255 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 255 (318)
.|...|.+++|+ |++.+|++|+.||.|++| |.++.+ ++..+..|...|.+++|+|++.
T Consensus 215 ------------~~~~~v~~~~~~-----~~~~~l~s~~~d~~v~iw--d~~~~~--~~~~~~~~~~~v~~~~~~p~~~~ 273 (401)
T 4aez_A 215 ------------GHSSEVCGLAWR-----SDGLQLASGGNDNVVQIW--DARSSI--PKFTKTNHNAAVKAVAWCPWQSN 273 (401)
T ss_dssp ------------CCSSCEEEEEEC-----TTSSEEEEEETTSCEEEE--ETTCSS--EEEEECCCSSCCCEEEECTTSTT
T ss_pred ------------CCCCCeeEEEEc-----CCCCEEEEEeCCCeEEEc--cCCCCC--ccEEecCCcceEEEEEECCCCCC
Confidence 345589999999 999999999999999999 555555 6667788999999999999765
Q ss_pred EEEEec--CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 256 CLYSCS--QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 256 ~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
++++++ .|+.|++||+.++.......+. ..|.+++|+|++++|+++
T Consensus 274 ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~---------------~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 274 LLATGGGTMDKQIHFWNAATGARVNTVDAG---------------SQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp EEEEECCTTTCEEEEEETTTCCEEEEEECS---------------SCEEEEEECSSSSEEEEE
T ss_pred EEEEecCCCCCEEEEEECCCCCEEEEEeCC---------------CcEEEEEECCCCCeEEEE
Confidence 666654 7999999999887655433222 378999999999999884
No 67
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=230.29 Aligned_cols=234 Identities=18% Similarity=0.170 Sum_probs=179.0
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCC--ccEEEEecCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNW--FSILAVGGRS 93 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~--~~~l~~g~~d 93 (318)
+...+++|+.||+|++||+..+...... .+.+|..+|.+++++++ +++|++|+.|
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~-----------------------~l~~h~~~V~~l~~s~~~~~~~l~s~s~D 76 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLID-----------------------TLTGHEGPVWRVDWAHPKFGTILASCSYD 76 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEE-----------------------EECCCSSCEEEEEECCTTSCSEEEEEETT
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccce-----------------------eccCCcCceEEEEecCCCCCCEEEEEeCC
Confidence 3457899999999999998743221111 12234444444444444 5999999999
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC--CcEEEEEeCCCcEEEEECCCcceee
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP--QVLLVTGSSDGSVRIWDGYIQELQK 171 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~ 171 (318)
|.|++||+.+++ ...+..+.+|...|++++| +++ +++|++|+.||.|++||++++....
T Consensus 77 g~I~vwd~~~~~------------~~~~~~~~~h~~~V~~v~~-------sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 77 GKVLIWKEENGR------------WSQIAVHAVHSASVNSVQW-------APHEYGPLLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp SCEEEEEEETTE------------EEEEEEECCCSSCEEEEEE-------CCGGGCSEEEEEETTSEEEEEECCSSSCCC
T ss_pred CeEEEEECCCCc------------ccccccccCCCCCeEEEEE-------CCCCCCCEEEEEeCCCcEEEEEeecCCCcc
Confidence 999999999864 2366778889999999999 787 8999999999999999998774332
Q ss_pred eecccccccccceeeeeecccceeEEEEeeccCCC-------------CceEEEEEeCCCcEEEeeeccCCCeeeEeeee
Q 021036 172 SAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-------------RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY 238 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-------------~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 238 (318)
... ...|...|.+++|+ | ++.++++|+.||.|++||+............+
T Consensus 138 ~~~------------~~~~~~~v~~l~~~-----p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~ 200 (753)
T 3jro_A 138 PII------------IDAHAIGVNSASWA-----PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL 200 (753)
T ss_dssp CEE------------EECCSSCEEEEEEC-----CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE
T ss_pred eeE------------eecCCCceEEEEec-----CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee
Confidence 211 13455689999999 6 58999999999999999766554444567788
Q ss_pred ecccCceeEEEEcCC---CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 239 NAHDQVVTGLAWAFD---GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 239 ~~h~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.+|...|++++|+|+ +.+|++++.||.|++||+.++....... ......|...|++++|+|+|++|++
T Consensus 201 ~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~---------~~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 201 EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT---------LLKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCC---------BSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeE---------EeccCCCCCceEEEEEcCCCCEEEE
Confidence 899999999999999 8999999999999999998753211100 0122346678999999999999998
Q ss_pred Ee
Q 021036 316 VQ 317 (318)
Q Consensus 316 ~~ 317 (318)
|.
T Consensus 272 ~s 273 (753)
T 3jro_A 272 SG 273 (753)
T ss_dssp EC
T ss_pred Ec
Confidence 74
No 68
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.8e-28 Score=205.53 Aligned_cols=234 Identities=18% Similarity=0.222 Sum_probs=171.4
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEE
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLW 99 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw 99 (318)
+++.+.|++|++||+.++++++.+.... |... +.+++|+|++ ++|++|+.||.|++|
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~~~~~~~~~--~~~~---V~~v~~~~~~------------------~~l~sgs~Dg~v~iw 94 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDILQLLQMEQ--PGEY---ISSVAWIKEG------------------NYLAVGTSSAEVQLW 94 (318)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCS--TTCC---EEEEEECTTS------------------SEEEEEETTSEEEEE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecC--CCCe---EEEEEECCCC------------------CEEEEEECCCcEEEe
Confidence 5666679999999999998876664322 3332 4446777666 999999999999999
Q ss_pred EccCCcccccccc---------------------------ccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE
Q 021036 100 RICVPKCYSVEDC---------------------------KVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 100 ~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
++++++++..... ........+..+.+|...+..+.+ .+++++|++
T Consensus 95 ~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~s 167 (318)
T 4ggc_A 95 DVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW-------APDGRHLAS 167 (318)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE-------CTTSSEEEE
T ss_pred ecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEE-------cCCCCEEEE
Confidence 9998875432110 011123445567789999999999 899999999
Q ss_pred EeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eE--EEEEeCCCcEEEeeeccCC
Q 021036 153 GSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-ML--LAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 153 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~--l~~~~~dg~i~vw~~~~~~ 229 (318)
++.|++|++||+++++....... ....+...|..+.+. |++ .. +++++.++.|++|+ .+.
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~----------~~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~~i~lwd--~~~ 230 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQ----------TFTQHQGAVKAVAWC-----PWQSNVLATGGGTSDRHIRIWN--VCS 230 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSE----------EECCCCSCEEEEEEC-----TTSTTEEEEEECTTTCEEEEEE--TTT
T ss_pred EecCcceeEEECCCCccccccee----------eecccCCceEEEEec-----CCCCcEEEEEecCCCCEEEEEe--ccc
Confidence 99999999999998764332211 112345578888888 554 33 35677899999994 445
Q ss_pred CeeeEeeeeecccCceeEEEEcCCCCEEEEe--cCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc
Q 021036 230 NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSC--SQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS 307 (318)
Q Consensus 230 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 307 (318)
.. .. ....+...+..+.|+|++..++++ +.|+.|++||+++++... .+.+|.+.|++++|+
T Consensus 231 ~~--~~-~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~--------------~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 231 GA--CL-SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA--------------ELKGHTSRVLSLTMS 293 (318)
T ss_dssp CC--EE-EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE--------------EECCCSSCEEEEEEC
T ss_pred cc--cc-ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE--------------EEcCCCCCEEEEEEc
Confidence 44 22 234577789999999998877654 489999999998876553 334577899999999
Q ss_pred CCCcEEEEEe
Q 021036 308 PGNLVVAMVQ 317 (318)
Q Consensus 308 p~~~~l~~~~ 317 (318)
|||++||+|.
T Consensus 294 pdg~~l~S~s 303 (318)
T 4ggc_A 294 PDGATVASAA 303 (318)
T ss_dssp TTSSCEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999999974
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.6e-29 Score=221.84 Aligned_cols=196 Identities=15% Similarity=0.098 Sum_probs=155.2
Q ss_pred CCcccccccCCCC-CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CC
Q 021036 70 SKKYPVPQNGSSN-WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQ 147 (318)
Q Consensus 70 ~~~~~v~~~~~s~-~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~ 147 (318)
.|...|++++|+| ++++||+|+.||.|+|||+.+++ ......+.+|.+.|++|+| +| ++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~------------~~~~~~~~gH~~~V~~l~f-------~p~~~ 177 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD------------KPTFIKGIGAGGSITGLKF-------NPLNT 177 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS------------CCEEECCCSSSCCCCEEEE-------CSSCT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC------------ceeEEEccCCCCCEEEEEE-------eCCCC
Confidence 3556688888887 46899999999999999998765 2344566789999999999 65 68
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
++|++|+.||+|++||++++........+. +...+.+++|+ |++.+|++|+.||.|++|| .
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~------------~~~~~~~~~~~-----~~~~~l~~g~~dg~i~~wd--~ 238 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDT------------INIWFCSLDVS-----ASSRMVVTGDNVGNVILLN--M 238 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSS------------CSCCCCCEEEE-----TTTTEEEEECSSSBEEEEE--S
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCC------------CCccEEEEEEC-----CCCCEEEEEeCCCcEeeec--c
Confidence 899999999999999998654332222211 23367889999 9999999999999999995 4
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCC-EEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEE
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAV 306 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 306 (318)
+.. .+..+.+|...|++++|+|++. +|++++.|++|++||++........ ....+|...|++++|
T Consensus 239 ~~~---~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~-----------~~~~~h~~~v~~~~~ 304 (435)
T 4e54_B 239 DGK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF-----------LYSLPHRHPVNAACF 304 (435)
T ss_dssp SSC---BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC-----------SBCCBCSSCEEECCB
T ss_pred Ccc---eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE-----------EEeeeccccccceeE
Confidence 433 4667889999999999999876 7889999999999999875432211 122347789999999
Q ss_pred cCCCcEEEEEe
Q 021036 307 SPGNLVVAMVQ 317 (318)
Q Consensus 307 sp~~~~l~~~~ 317 (318)
+|+|++|+++.
T Consensus 305 spdg~~l~s~~ 315 (435)
T 4e54_B 305 SPDGARLLTTD 315 (435)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCeeEEEc
Confidence 99999999874
No 70
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=205.25 Aligned_cols=229 Identities=15% Similarity=0.219 Sum_probs=174.8
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc---------------------------C
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR---------------------------L 68 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~---------------------------~ 68 (318)
+...+++++.|+.+++||+.+++....+.. +... +.+++|+|++. +
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~----~~~~---v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~ 100 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQWLGTVVYT----GQGF---LNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTL 100 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSEEEEEEEE----CSSC---EEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEE
T ss_pred CCCEEEEEEcCCcEEEEECCCCEEEEEeec----CCcc---EEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccch
Confidence 345689999999999999988765444432 2222 33355555432 3
Q ss_pred CCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CC
Q 021036 69 SSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQ 147 (318)
Q Consensus 69 ~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~ 147 (318)
..|..+|.++.+ ++++|++++.||.|++|| . .+....+..|...|.++.| .+ ++
T Consensus 101 ~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~--------------~~~~~~~~~~~~~v~~~~~-------~~~~~ 155 (313)
T 3odt_A 101 IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--E--------------GSLVYNLQAHNASVWDAKV-------VSFSE 155 (313)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--T--------------TEEEEEEECCSSCEEEEEE-------EETTT
T ss_pred hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--C--------------CcEEEecccCCCceeEEEE-------ccCCC
Confidence 356677777777 567888888889999998 2 3466778889999999999 44 78
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
++|++++.|+.|++||.. +....+.. .+...+.+++|+ |++. +++++.||.|++| +.
T Consensus 156 ~~l~~~~~d~~i~i~d~~--~~~~~~~~-------------~~~~~i~~~~~~-----~~~~-~~~~~~dg~i~i~--d~ 212 (313)
T 3odt_A 156 NKFLTASADKTIKLWQND--KVIKTFSG-------------IHNDVVRHLAVV-----DDGH-FISCSNDGLIKLV--DM 212 (313)
T ss_dssp TEEEEEETTSCEEEEETT--EEEEEECS-------------SCSSCEEEEEEE-----ETTE-EEEEETTSEEEEE--ET
T ss_pred CEEEEEECCCCEEEEecC--ceEEEEec-------------cCcccEEEEEEc-----CCCe-EEEccCCCeEEEE--EC
Confidence 899999999999999943 33333332 144589999999 8888 9999999999999 55
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS 307 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 307 (318)
++++ .+..+.+|...|++++|+|++ .|++++.||.|++||+.++....... .|...|.+++|+
T Consensus 213 ~~~~--~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~--------------~~~~~i~~~~~~ 275 (313)
T 3odt_A 213 HTGD--VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVIT--------------LPAISIWSVDCM 275 (313)
T ss_dssp TTCC--EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEE--------------CSSSCEEEEEEC
T ss_pred Cchh--hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEe--------------ccCceEEEEEEc
Confidence 5665 677888999999999999999 58999999999999998876543221 233589999999
Q ss_pred CCCcEEEEE
Q 021036 308 PGNLVVAMV 316 (318)
Q Consensus 308 p~~~~l~~~ 316 (318)
|++++++.+
T Consensus 276 ~~~~~~~~~ 284 (313)
T 3odt_A 276 SNGDIIVGS 284 (313)
T ss_dssp TTSCEEEEE
T ss_pred cCCCEEEEe
Confidence 999976643
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.7e-28 Score=229.79 Aligned_cols=238 Identities=12% Similarity=0.117 Sum_probs=191.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc------------------------CCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR------------------------LSSK 71 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~------------------------~~~~ 71 (318)
+...+++++.|+.|++||+.+++.+..+.. |... +.+++|+|++. +..|
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~----~~~~---v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 96 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQV----TETP---VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH 96 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSC---EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEec----CCCc---EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence 445688999999999999999876665543 3333 44466666553 3468
Q ss_pred cccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEE
Q 021036 72 KYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLL 150 (318)
Q Consensus 72 ~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l 150 (318)
...|.++++++++++|++++.||.|++|++.++. .....+.+|...|.+++| ++ ++..|
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~-------------~~~~~~~~~~~~v~~~~~-------~p~~~~~l 156 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAF-------NPKDPSTF 156 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS-------------EEEEEEECCSSCEEEEEE-------ETTEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc-------------eEEEEEcCCCCcEEEEEE-------EcCCCCEE
Confidence 8899999999999999999999999999998752 455678899999999999 77 78899
Q ss_pred EEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC--CceEEEEEeCCCcEEEeeeccC
Q 021036 151 VTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP--RLMLLAVGKGSGSFDLWKCDIS 228 (318)
Q Consensus 151 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~--~~~~l~~~~~dg~i~vw~~~~~ 228 (318)
++++.||.|++||+.+++....+..+ +...+..++|+ | ++.++++++.||.|++| +.+
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~-------------~~~~v~~~~~~-----~~~~~~~l~~~~~dg~i~~~--d~~ 216 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTG-------------QERGVNYVDYY-----PLPDKPYMITASDDLTIKIW--DYQ 216 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECC-------------CTTCCCEEEEC-----CSTTCCEEEEECTTSEEEEE--ETT
T ss_pred EEEeCCCeEEEEECCCCcceeEEecC-------------CCCCEEEEEEE-----ECCCCCEEEEEeCCCEEEEE--ECC
Confidence 99999999999999887665554432 23478999998 7 89999999999999999 556
Q ss_pred CCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcC
Q 021036 229 CNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP 308 (318)
Q Consensus 229 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 308 (318)
+++ .+..+.+|...|.+++|+|++.+|++++.||.|++||+.++...... ..|...+.+++|+|
T Consensus 217 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~--------------~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 217 TKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL--------------NVGLERSWCIATHP 280 (814)
T ss_dssp TTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE--------------CCSSSSEEEEEECT
T ss_pred CCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------------ecCCCcEEEEEEcc
Confidence 665 67778889999999999999999999999999999999886554322 11334778888888
Q ss_pred CCc--EEEEE
Q 021036 309 GNL--VVAMV 316 (318)
Q Consensus 309 ~~~--~l~~~ 316 (318)
+++ +++++
T Consensus 281 ~~~~~~~~~~ 290 (814)
T 3mkq_A 281 TGRKNYIASG 290 (814)
T ss_dssp TCGGGEEEEE
T ss_pred CCCceEEEEE
Confidence 876 45554
No 72
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.2e-28 Score=212.41 Aligned_cols=254 Identities=16% Similarity=0.199 Sum_probs=174.2
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCcc-EEEEe
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFS-ILAVG 90 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~-~l~~g 90 (318)
+.+.+...+++++.|+.|++||+.+........ -...+...+..|..+|.++++++++. +|++|
T Consensus 136 ~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~---------------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 136 YMPQNACVIATKTPSSDVLVFDYTKHPSKPEPS---------------GECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EETTEEEEEEEECSSSCEEEEEGGGSCSSCCTT---------------CCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred ECCCCCcEEEEECCCCcEEEEECCCcccccCcc---------------ccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 333345678999999999999997632111100 00001112223444445555555446 99999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcc-
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQE- 168 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~- 168 (318)
+.||.|++|++..+.... ........+.+|...|.+++| ++ ++.+|++++.|+.|++||++++.
T Consensus 201 ~~dg~i~vwd~~~~~~~~-------~~~~~~~~~~~h~~~v~~v~~-------~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEH-------RVIDAKNIFTGHTAVVEDVAW-------HLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp CTTSCEEEEETTSCCBGG-------GEEECSEEECCCSSCEEEEEE-------CSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred eCCCeEEEEeCCCCCCCC-------ceeccceeecCCCCCEeeeEE-------eCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 999999999998743210 001224567789999999999 66 67899999999999999999763
Q ss_pred --eeeeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCce
Q 021036 169 --LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVV 245 (318)
Q Consensus 169 --~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v 245 (318)
....+. .|...|++++|+ |++. +|++|+.||.|++|| .+... .++..+.+|...|
T Consensus 267 ~~~~~~~~--------------~~~~~v~~i~~~-----p~~~~~l~tg~~dg~v~vwd--~~~~~-~~~~~~~~h~~~v 324 (430)
T 2xyi_A 267 SKPSHTVD--------------AHTAEVNCLSFN-----PYSEFILATGSADKTVALWD--LRNLK-LKLHSFESHKDEI 324 (430)
T ss_dssp SSCSEEEE--------------CCSSCEEEEEEC-----SSCTTEEEEEETTSEEEEEE--TTCTT-SCSEEEECCSSCE
T ss_pred CcceeEee--------------cCCCCeEEEEeC-----CCCCCEEEEEeCCCeEEEEe--CCCCC-CCeEEeecCCCCE
Confidence 333332 355689999999 8776 799999999999995 44422 1567788899999
Q ss_pred eEEEEcCCCC-EEEEecCCCcEEEEEecCCceeeeecC-CCCCCccccccCCCcceeeeEEEEcCCCc-EEEEEe
Q 021036 246 TGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLSQVSIP-TNTPGLQSCTDLPDAFVSCLGMAVSPGNL-VVAMVQ 317 (318)
Q Consensus 246 ~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~~~~ 317 (318)
++++|+|+++ +|++++.|+.|++||+........... ...+ ......+.+|...|++++|+|+++ +|+++.
T Consensus 325 ~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 325 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP-PELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC-TTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC-cceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 9999999985 799999999999999986321100000 0000 000123345778999999999998 787764
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=6.4e-28 Score=213.16 Aligned_cols=245 Identities=12% Similarity=0.118 Sum_probs=188.2
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc-----------------------CCCCcc
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR-----------------------LSSKKY 73 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~-----------------------~~~~~~ 73 (318)
...+++|+.|++|++||+.+++.+..+.. |... +.+++|+|++. +.+|..
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~~~~~~~~~----h~~~---V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~ 204 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINKKFLLQLSG----HDGG---VWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS 204 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECC----CSSC---EEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEeC----CCcC---EEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCC
Confidence 35689999999999999999876555542 3333 23344444321 456888
Q ss_pred cccccCCC--CCccEEEEecCCCcEEEEEccCCcccccccc---------ccCCceeEEeeeccccccEEEEEeeeecCC
Q 021036 74 PVPQNGSS--NWFSILAVGGRSGKVSLWRICVPKCYSVEDC---------KVPTTAVLIGLFQAHNSWITSISLAVLSSD 142 (318)
Q Consensus 74 ~v~~~~~s--~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~---------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 142 (318)
+|.+++++ +++++|++|+.||.|++||+.++........ .+......+..+.+|...|.++..
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------ 278 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG------ 278 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE------
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC------
Confidence 99999988 5789999999999999999987653321100 011111235677889999998855
Q ss_pred CCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEE
Q 021036 143 SSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDL 222 (318)
Q Consensus 143 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~v 222 (318)
++++|++++.|+.|++||+++++.+..+..+. ..|.+++|+ |+++.+++|+.||.|++
T Consensus 279 ---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~--------------~~v~~~~~~-----~~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 279 ---HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT--------------DRIYSTIYD-----HERKRCISASMDTTIRI 336 (464)
T ss_dssp ---ETTEEEEEETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEE-----TTTTEEEEEETTSCEEE
T ss_pred ---CCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--------------CCEEEEEEc-----CCCCEEEEEeCCCcEEE
Confidence 57799999999999999999988877766544 489999999 99999999999999999
Q ss_pred eeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeee
Q 021036 223 WKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCL 302 (318)
Q Consensus 223 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 302 (318)
| +.++++ .+..+.+|...|.+++|+ +.+|++++.||.|++||+.+........+. ..+.
T Consensus 337 w--d~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~---------------~~~~ 395 (464)
T 3v7d_B 337 W--DLENGE--LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHT---------------NLSA 395 (464)
T ss_dssp E--ETTTTE--EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECT---------------TCCC
T ss_pred E--ECCCCc--EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCC---------------CCcc
Confidence 9 566666 777889999999999998 579999999999999999886544332222 2567
Q ss_pred EEEEcCCCcEEEEEe
Q 021036 303 GMAVSPGNLVVAMVQ 317 (318)
Q Consensus 303 ~v~~sp~~~~l~~~~ 317 (318)
.++|+|++++|++|.
T Consensus 396 ~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEEECSSEEEEEE
T ss_pred EEEEEeCCCEEEEec
Confidence 889999999999874
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-28 Score=210.65 Aligned_cols=200 Identities=18% Similarity=0.208 Sum_probs=160.7
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP- 146 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~- 146 (318)
+.+|..+|+++++++++++|++|+.||.|++|++..+. .+.+..+.+|...|++++| +++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~------------~~~~~~~~~h~~~v~~~~~-------~~~~ 67 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGPVWRVDW-------AHPK 67 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE------------EEEEEEECCCSSCEEEEEE-------CCGG
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc------------ceeeeEecCCCCcEEEEEe-------CCCC
Confidence 34577777777777777999999999999999998543 5677788999999999999 665
Q ss_pred -CcEEEEEeCCCcEEEEECCCcc--eeeeecccccccccceeeeeecccceeEEEEeeccCCCC--ceEEEEEeCCCcEE
Q 021036 147 -QVLLVTGSSDGSVRIWDGYIQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR--LMLLAVGKGSGSFD 221 (318)
Q Consensus 147 -~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~--~~~l~~~~~dg~i~ 221 (318)
+++|++++.||.|++||+.+++ ....+.. |...|.+++|+ |+ +.+|++++.|+.|+
T Consensus 68 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--------------~~~~v~~~~~~-----~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 68 FGTILASCSYDGKVLIWKEENGRWSQIAVHAV--------------HSASVNSVQWA-----PHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp GCSEEEEEETTSCEEEEEEETTEEEEEEEECC--------------CSSCEEEEEEC-----CGGGCSEEEEEETTSEEE
T ss_pred CCCEEEEeccCCEEEEEEcCCCceeEeeeecC--------------CCcceEEEEeC-----CCCCCCEEEEecCCCcEE
Confidence 8999999999999999999876 3333332 44589999999 88 89999999999999
Q ss_pred EeeeccCCCeeeEeeeeecccCceeEEEEcC-------------CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCc
Q 021036 222 LWKCDISCNKFDKVGSYNAHDQVVTGLAWAF-------------DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGL 288 (318)
Q Consensus 222 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------------~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 288 (318)
+|++. .........+.+|...|.+++|+| ++.+|++++.|+.|++||++++.......
T Consensus 129 v~d~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------- 199 (379)
T 3jrp_A 129 VVEFK--ENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE------- 199 (379)
T ss_dssp EEECC--TTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEE-------
T ss_pred EEecC--CCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE-------
Confidence 99554 432224456778999999999999 68999999999999999998754321110
Q ss_pred cccccCCCcceeeeEEEEcCC---CcEEEEEe
Q 021036 289 QSCTDLPDAFVSCLGMAVSPG---NLVVAMVQ 317 (318)
Q Consensus 289 ~~~~~~~~h~~~v~~v~~sp~---~~~l~~~~ 317 (318)
..+.+|...|.+++|+|+ +.+|+++.
T Consensus 200 ---~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 200 ---STLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp ---EEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ---EEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 123346679999999999 89999874
No 75
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=9.6e-28 Score=203.06 Aligned_cols=209 Identities=13% Similarity=0.167 Sum_probs=162.2
Q ss_pred CCCCcccccccCCCCC-ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC
Q 021036 68 LSSKKYPVPQNGSSNW-FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~-~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 146 (318)
+++|..+|++++++|+ +++|++|+.||+|+|||+.+++... ..+.+.+.+|...|.+++| +++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~---------~~~~~~l~~h~~~V~~~~~-------s~d 97 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY---------GIPQRALRGHSHFVSDVVI-------SSD 97 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS---------EEEEEEECCCSSCEEEEEE-------CTT
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc---------ceeeEEEeCCCCCEEEEEE-------CCC
Confidence 5667777777777775 6899999999999999998755321 4466788999999999999 899
Q ss_pred CcEEEEEeCCCcEEEEECCCcceeeeeccccccccc-----------------------------ceeeeeecccceeEE
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSL-----------------------------LKEVVTVNTVPISVL 197 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~v~~l 197 (318)
+++|++++.|+.|++|+............+...... .......|...+..+
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~ 177 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 177 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEE
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccce
Confidence 999999999999999999876554433221110000 001223566778888
Q ss_pred EEeeccCCCC--ceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCc
Q 021036 198 SLILPVQSPR--LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 198 ~~~~~~~~~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 275 (318)
+|+ ++ ..++++++.|+.|++| +.++.+ .+..+.+|...|++++|+|++++|++++.|+.|++||+++..
T Consensus 178 ~~~-----~~~~~~~~~s~~~d~~i~i~--d~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 178 RFS-----PNSSNPIIVSCGWDKLVKVW--NLANCK--LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp EEC-----SCSSSCEEEEEETTSCEEEE--ETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred EEc-----cCCCCcEEEEEcCCCEEEEE--ECCCCc--eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 887 44 4678999999999999 566666 677788999999999999999999999999999999999876
Q ss_pred eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 276 LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
........ ..|.+++|+|++.+++++
T Consensus 249 ~~~~~~~~---------------~~v~~~~~~~~~~~~~~~ 274 (340)
T 4aow_A 249 HLYTLDGG---------------DIINALCFSPNRYWLCAA 274 (340)
T ss_dssp EEEEEECS---------------SCEEEEEECSSSSEEEEE
T ss_pred eeeeecCC---------------ceEEeeecCCCCceeecc
Confidence 55433222 378999999999888765
No 76
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=4.3e-28 Score=224.74 Aligned_cols=234 Identities=16% Similarity=0.238 Sum_probs=168.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++||+.++++...+.. |... +.+++|+|++ ++|++|+.|++
T Consensus 441 ~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~----h~~~---v~~~~~s~~~------------------~~l~s~s~D~~ 495 (694)
T 3dm0_A 441 DGQFALSGSWDGELRLWDLAAGVSTRRFVG----HTKD---VLSVAFSLDN------------------RQIVSASRDRT 495 (694)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSC---EEEEEECTTS------------------SCEEEEETTSC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcceeEEeC----CCCC---EEEEEEeCCC------------------CEEEEEeCCCE
Confidence 455689999999999999988765433322 3332 3335555555 99999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC--cEEEEEeCCCcEEEEECCCcceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ--VLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~--~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|++||...... ........+|...|.+++| ++++ ..|++++.|++|++||+++++....+
T Consensus 496 i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~~~~-------~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 496 IKLWNTLGECK-----------YTISEGGEGHRDWVSCVRF-------SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp EEEECTTSCEE-----------EEECSSTTSCSSCEEEEEE-------CSCSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEECCCCcc-----------eeeccCCCCCCCcEEEEEE-------eCCCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 99999865321 1111223578999999999 6665 58999999999999999988877666
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 253 (318)
..| ...|++++|+ |++++|++|+.||.|++| |.++++ .+..+. +...|.+++|+|+
T Consensus 558 ~~h--------------~~~v~~v~~s-----pdg~~l~sg~~Dg~i~iw--d~~~~~--~~~~~~-~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 558 AGH--------------TGYVSTVAVS-----PDGSLCASGGKDGVVLLW--DLAEGK--KLYSLE-ANSVIHALCFSPN 613 (694)
T ss_dssp CCC--------------SSCEEEEEEC-----TTSSEEEEEETTSBCEEE--ETTTTE--EEECCB-CSSCEEEEEECSS
T ss_pred cCC--------------CCCEEEEEEe-----CCCCEEEEEeCCCeEEEE--ECCCCc--eEEEec-CCCcEEEEEEcCC
Confidence 554 4489999999 999999999999999999 566665 455554 4567999999999
Q ss_pred CCEEEEecCCCcEEEEEecCCceeeee-cCCCCCCcc----ccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 254 GCCLYSCSQDNFVRSWIFHGNSLSQVS-IPTNTPGLQ----SCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 254 ~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~----~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+.++++++ |+.|++||++++...... .+....... +......+...+++++|+|||++|++|.
T Consensus 614 ~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 614 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 681 (694)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc
Confidence 98777665 566999999987654322 111100000 0011112333578999999999999985
No 77
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.8e-28 Score=212.29 Aligned_cols=231 Identities=10% Similarity=0.042 Sum_probs=177.3
Q ss_pred CCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccccc--------------CC-CCcccccccC
Q 021036 15 SNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLR--------------LS-SKKYPVPQNG 79 (318)
Q Consensus 15 ~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~--------------~~-~~~~~v~~~~ 79 (318)
.+...++++|.|++|+ |...++++ . +|... +..++++|++. +. .|...|.+++
T Consensus 25 pDG~~iASas~D~TV~--d~~~~~~l---~----gh~~~---v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 25 RDGTLYLTTFPDISIG--QPKYAKDI---N----CNSKN---LFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp TTSCEEEECSSSEEEE--EECCCSCC---S----SBGGG---TEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred CCCCEEEEEcCCceee--ccccccee---c----CCCcc---EEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 4667789999999999 76555543 1 25554 44588888764 11 4566799999
Q ss_pred CCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccc-----cEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 80 SSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS-----WITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 80 ~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
|||+|++||+++.||.|++|+.+. .+..+. |.. .|.+++| +|+|++|++|+
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~----------------~l~~l~-~~~~~~~~sv~svaf-------SPDG~~LAsgs 148 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK----------------MLTNLD-SKGNLSSRTYHCFEW-------NPIESSIVVGN 148 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE----------------EEEECC-CSSCSTTTCEEEEEE-------CSSSSCEEEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc----------------eeeecc-CCCccccccEEEEEE-------cCCCCEEEEEc
Confidence 999999999999999999999653 445555 655 4999999 99999999999
Q ss_pred CCCcEEEEECCCcce-------eeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 155 SDGSVRIWDGYIQEL-------QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
.||+|++||+.++.. +.++..+. .+|...|.+++|+ |+| +++++.|+.|++|++
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~----------~gh~~~V~sVawS-----Pdg--Laass~D~tVrlWd~-- 209 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIRLSD----------AGSKDWVTHIVWY-----EDV--LVAALSNNSVFSMTV-- 209 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEECSC----------TTCCCCEEEEEEE-----TTE--EEEEETTCCEEEECC--
T ss_pred CCCEEEEEECCCCccccccceeeeeeeccc----------ccccccEEEEEEc-----CCc--EEEEeCCCeEEEEEC--
Confidence 999999999998753 34442222 2355699999999 998 788888999999954
Q ss_pred CCCeee-Eeeeee-cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEE
Q 021036 228 SCNKFD-KVGSYN-AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMA 305 (318)
Q Consensus 228 ~~~~~~-~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 305 (318)
.++... ...+++ +|...|.+++|+ |..||+++ +++|++||+.++....... +|.+.|++++
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~--------------gh~~~V~~va 272 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKT--------------GSLENFHIIP 272 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEEC--------------SCCSCCCEEE
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEc--------------CCCceEEEEE
Confidence 443321 234453 788899999999 68899887 6999999999877754331 2556899999
Q ss_pred E--cCCCcEEEEEe
Q 021036 306 V--SPGNLVVAMVQ 317 (318)
Q Consensus 306 ~--sp~~~~l~~~~ 317 (318)
| +||++.|+++.
T Consensus 273 ~~~s~d~~~La~a~ 286 (588)
T 2j04_A 273 LNHEKESTILLMSN 286 (588)
T ss_dssp ETTCSSCEEEEECS
T ss_pred eeeCCCCCEEEEEc
Confidence 9 99999998864
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=203.52 Aligned_cols=228 Identities=10% Similarity=0.088 Sum_probs=176.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++++.|+.+++||+.+++.+..+.. |... +.+++|+|++ ++|++++.||.
T Consensus 43 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----h~~~---v~~~~~~~~~------------------~~l~s~~~dg~ 97 (369)
T 3zwl_B 43 EGDLLFSCSKDSSASVWYSLNGERLGTLDG----HTGT---IWSIDVDCFT------------------KYCVTGSADYS 97 (369)
T ss_dssp TSCEEEEEESSSCEEEEETTTCCEEEEECC----CSSC---EEEEEECTTS------------------SEEEEEETTTE
T ss_pred CCCEEEEEeCCCEEEEEeCCCchhhhhhhh----cCCc---EEEEEEcCCC------------------CEEEEEeCCCe
Confidence 455789999999999999998876444432 3332 3346666655 99999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC-----CcEEEEECCCccee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD-----GSVRIWDGYIQELQ 170 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~ 170 (318)
|++||+.+++ .+..+. +...|.+++| ++++++|++++.+ +.|++||+..+...
T Consensus 98 i~iwd~~~~~--------------~~~~~~-~~~~v~~~~~-------~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 98 IKLWDVSNGQ--------------CVATWK-SPVPVKRVEF-------SPCGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp EEEEETTTCC--------------EEEEEE-CSSCEEEEEE-------CTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred EEEEECCCCc--------------EEEEee-cCCCeEEEEE-------ccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 9999999854 444555 7889999999 8999999999999 99999999876543
Q ss_pred eeecccccccccceeeeeeccc--ceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC-CeeeEeeeeecccCceeE
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTV--PISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC-NKFDKVGSYNAHDQVVTG 247 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~h~~~v~~ 247 (318)
..+..... . .......+.. .+.+++|+ |++++|++++.||.|++| +.++ .+ .+..+..|...|.+
T Consensus 156 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~dg~i~i~--d~~~~~~--~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 156 HELTKVSE--E-PIHKIITHEGLDAATVAGWS-----TKGKYIIAGHKDGKISKY--DVSNNYE--YVDSIDLHEKSISD 223 (369)
T ss_dssp CCEEEECS--S-CSEEEECCTTCCCEEEEEEC-----GGGCEEEEEETTSEEEEE--ETTTTTE--EEEEEECCSSCEEE
T ss_pred eeeccccc--c-eeeeccCCcCccceeEEEEc-----CCCCEEEEEcCCCEEEEE--ECCCCcE--eEEEEecCCCceeE
Confidence 33221110 0 0011223333 89999999 999999999999999999 4555 33 66778889999999
Q ss_pred EEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 248 LAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 248 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
++|+|++.+|++++.|+.|++||++++......... ..+..++|+|++++++++.
T Consensus 224 ~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD---------------CPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS---------------SCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCCEEEEecCCceEEEEECCCCceeeeecCC---------------CCceeEEecCCCceEEEee
Confidence 999999999999999999999999987665433322 3789999999999998864
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1.6e-27 Score=201.16 Aligned_cols=190 Identities=14% Similarity=0.168 Sum_probs=162.0
Q ss_pred CCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcE
Q 021036 70 SKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 70 ~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
.|..+|.++.+++++++|++++.||.|++|++.+++ ......+..|...|.+++| ++++++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------------~~~~~~~~~~~~~i~~~~~-------~~~~~~ 155 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT------------PRIKAELTSSAPACYALAI-------SPDSKV 155 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--------------EEEEEEECSSSCEEEEEE-------CTTSSE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC------------cceeeecccCCCceEEEEE-------CCCCCE
Confidence 577889999999999999999999999999998765 2355677889999999999 889999
Q ss_pred EEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC
Q 021036 150 LVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 150 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 229 (318)
|++++.|+.|++||+++++....+..+. ..+.+++|+ |++++|++++.||.|++| +.++
T Consensus 156 l~~~~~dg~v~~~d~~~~~~~~~~~~~~--------------~~i~~~~~~-----~~~~~l~~~~~dg~i~~~--d~~~ 214 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLHNQTLVRQFQGHT--------------DGASCIDIS-----NDGTKLWTGGLDNTVRSW--DLRE 214 (337)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEC-----TTSSEEEEEETTSEEEEE--ETTT
T ss_pred EEEEeCCCcEEEEeCCCCceeeeeeccc--------------CceEEEEEC-----CCCCEEEEEecCCcEEEE--ECCC
Confidence 9999999999999999988777665443 489999999 999999999999999999 5566
Q ss_pred CeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCC
Q 021036 230 NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPG 309 (318)
Q Consensus 230 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 309 (318)
++ .+..+ .+...+.+++|+|++++|++++.|+.|++||+.++....+.. |...|.+++|+|+
T Consensus 215 ~~--~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 215 GR--QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---------------HESCVLSLKFAYC 276 (337)
T ss_dssp TE--EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC---------------CSSCEEEEEECTT
T ss_pred Cc--eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC---------------CccceeEEEECCC
Confidence 65 34444 477889999999999999999999999999998876554332 4458999999999
Q ss_pred CcEEEEEe
Q 021036 310 NLVVAMVQ 317 (318)
Q Consensus 310 ~~~l~~~~ 317 (318)
+++|+++.
T Consensus 277 ~~~l~~~~ 284 (337)
T 1gxr_A 277 GKWFVSTG 284 (337)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEec
Confidence 99999874
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.3e-27 Score=207.31 Aligned_cols=219 Identities=20% Similarity=0.337 Sum_probs=173.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|+.+++||+.+++.+..+.. |... +.++.|+ + ++|++|+.||.
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~---v~~~~~~--~------------------~~l~~~~~dg~ 197 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMAG----HQAR---VGCLSWN--R------------------HVLSSGSRSGA 197 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECC----CSSC---EEEEEEE--T------------------TEEEEEETTSE
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEecC----CCCc---eEEEEEC--C------------------CEEEEEcCCCC
Confidence 456789999999999999998876554432 3333 3446673 3 79999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
|++||+.... ..+..+.+|...|.+++| ++++.+|++|+.|+.|++||+++++....+..
T Consensus 198 i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~-------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 257 (401)
T 4aez_A 198 IHHHDVRIAN-------------HQIGTLQGHSSEVCGLAW-------RSDGLQLASGGNDNVVQIWDARSSIPKFTKTN 257 (401)
T ss_dssp EEEEETTSSS-------------CEEEEEECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTCSSEEEEECC
T ss_pred EEEEecccCc-------------ceeeEEcCCCCCeeEEEE-------cCCCCEEEEEeCCCeEEEccCCCCCccEEecC
Confidence 9999998532 356778899999999999 88999999999999999999998877766654
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEe--CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGK--GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAF 252 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 252 (318)
+ ...|.+++|+ |++ .++++++ .|+.|++| +.++++ .+..+. +...|.+++|+|
T Consensus 258 ~--------------~~~v~~~~~~-----p~~~~ll~~~~gs~d~~i~i~--d~~~~~--~~~~~~-~~~~v~~~~~s~ 313 (401)
T 4aez_A 258 H--------------NAAVKAVAWC-----PWQSNLLATGGGTMDKQIHFW--NAATGA--RVNTVD-AGSQVTSLIWSP 313 (401)
T ss_dssp C--------------SSCCCEEEEC-----TTSTTEEEEECCTTTCEEEEE--ETTTCC--EEEEEE-CSSCEEEEEECS
T ss_pred C--------------cceEEEEEEC-----CCCCCEEEEecCCCCCEEEEE--ECCCCC--EEEEEe-CCCcEEEEEECC
Confidence 4 3489999999 765 5677765 79999999 555655 455554 667899999999
Q ss_pred CCCEEEE--ecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 253 DGCCLYS--CSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 253 ~~~~l~s--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+++++++ |+.||.|++||+.++...... .+.+|...|.+++|+|++++|+++.
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~------------~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQV------------DIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEEEEE------------EEECCSSCCCEEEECTTSSEEEEEC
T ss_pred CCCeEEEEeecCCCcEEEEecCCccceeEE------------EecCCCCCEEEEEECCCCCEEEEEe
Confidence 9999998 558999999999886554322 1223556899999999999999874
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=1.8e-27 Score=203.93 Aligned_cols=238 Identities=16% Similarity=0.130 Sum_probs=173.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++++.|+.+++||+++++........ .+... +.+++|+|++ ++|++++.||.
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~---v~~~~~~~~~------------------~~l~~~~~d~~ 119 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL--RINRA---ARCVRWAPNE------------------KKFAVGSGSRV 119 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEEEEECC--CCSSC---EEEEEECTTS------------------SEEEEEETTSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeeeeEEee--cCCCc---eeEEEECCCC------------------CEEEEEeCCCE
Confidence 4566899999999999999877643333211 12222 3345666655 99999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC---------
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI--------- 166 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~--------- 166 (318)
|++|+++.++.. .........|...|.+++| ++++++|++++.|+.|++||++.
T Consensus 120 v~i~d~~~~~~~----------~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 182 (372)
T 1k8k_C 120 ISICYFEQENDW----------WVCKHIKKPIRSTVLSLDW-------HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 182 (372)
T ss_dssp EEEEEEETTTTE----------EEEEEECTTCCSCEEEEEE-------CTTSSEEEEEETTSCEEEEECCCTTTSCCCCC
T ss_pred EEEEEecCCCcc----------eeeeeeecccCCCeeEEEE-------cCCCCEEEEEcCCCCEEEEEcccccccccccc
Confidence 999999876521 1122334678999999999 88999999999999999999753
Q ss_pred ---------cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeee
Q 021036 167 ---------QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGS 237 (318)
Q Consensus 167 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 237 (318)
++....+. .|...|.+++|+ |++.+|++++.||.|++| +.++++ .+..
T Consensus 183 ~~~~~~~~~~~~~~~~~--------------~~~~~v~~~~~~-----~~~~~l~~~~~d~~i~i~--d~~~~~--~~~~ 239 (372)
T 1k8k_C 183 TPWGSKMPFGELMFESS--------------SSCGWVHGVCFS-----ANGSRVAWVSHDSTVCLA--DADKKM--AVAT 239 (372)
T ss_dssp BTTBSCCCTTCEEEECC--------------CCSSCEEEEEEC-----SSSSEEEEEETTTEEEEE--EGGGTT--EEEE
T ss_pred cccccccchhhheEecC--------------CCCCeEEEEEEC-----CCCCEEEEEeCCCEEEEE--ECCCCc--eeEE
Confidence 33333332 455689999999 999999999999999999 455555 6777
Q ss_pred eecccCceeEEEEcCCCCEEEEecCCCcEEEEEecC--CceeeeecCCC---------------------CCCc--c-cc
Q 021036 238 YNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHG--NSLSQVSIPTN---------------------TPGL--Q-SC 291 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~--~~~~~~~~~~~---------------------~~~~--~-~~ 291 (318)
+..|...|.+++|+|++.+++++ .|+.|++|++.. +.......... .... + ..
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 318 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred EccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccc
Confidence 88899999999999999988887 899999999988 53221110000 0000 0 00
Q ss_pred ccC-CCcceeeeEEEEc-CCC---cEEEEEe
Q 021036 292 TDL-PDAFVSCLGMAVS-PGN---LVVAMVQ 317 (318)
Q Consensus 292 ~~~-~~h~~~v~~v~~s-p~~---~~l~~~~ 317 (318)
..+ .+|...|++++|. ++| .+|++|.
T Consensus 319 ~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~ 349 (372)
T 1k8k_C 319 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTG 349 (372)
T ss_dssp CCCSSSSSSCEEEEEEEESTTTSCSEEEEEE
T ss_pred ccccccccCCcceeEEecCCCcceeeEEEec
Confidence 122 4899999999977 577 8999875
No 82
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=7.4e-29 Score=213.22 Aligned_cols=205 Identities=12% Similarity=0.065 Sum_probs=152.4
Q ss_pred cccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE
Q 021036 72 KYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV 151 (318)
Q Consensus 72 ~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~ 151 (318)
..+|.++++++++++|++|+.||.|++|++.++. .+.+..+.+|...|.+++| ++++++|+
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~------------~~~~~~~~~h~~~v~~~~~-------s~~~~~l~ 71 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG------------WKHARTFSDHDKIVTCVDW-------APKSNRIV 71 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE------------EEECCCBCCCSSCEEEEEE-------CTTTCCEE
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc------------eEEEEEEecCCceEEEEEE-------eCCCCEEE
Confidence 3466777777777999999999999999999752 2466788899999999999 89999999
Q ss_pred EEeCCCcEEEEECCCcc---eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccC
Q 021036 152 TGSSDGSVRIWDGYIQE---LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDIS 228 (318)
Q Consensus 152 s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 228 (318)
+++.|++|++||+.+++ ....+. .|...|.+++|+ |++++|++++.|+.|++|++ +
T Consensus 72 s~s~d~~v~vwd~~~~~~~~~~~~~~--------------~~~~~v~~~~~~-----~~~~~l~~~~~d~~i~iwd~--~ 130 (377)
T 3dwl_C 72 TCSQDRNAYVYEKRPDGTWKQTLVLL--------------RLNRAATFVRWS-----PNEDKFAVGSGARVISVCYF--E 130 (377)
T ss_dssp EEETTSSEEEC------CCCCEEECC--------------CCSSCEEEEECC-----TTSSCCEEEESSSCEEECCC---
T ss_pred EEeCCCeEEEEEcCCCCceeeeeEec--------------ccCCceEEEEEC-----CCCCEEEEEecCCeEEEEEE--C
Confidence 99999999999999876 233232 345589999999 99999999999999999954 3
Q ss_pred CCe-eeEeeeeec-ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecC-CCCCCcc---ccccCCCcceeee
Q 021036 229 CNK-FDKVGSYNA-HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIP-TNTPGLQ---SCTDLPDAFVSCL 302 (318)
Q Consensus 229 ~~~-~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~---~~~~~~~h~~~v~ 302 (318)
..+ +.....+.+ |...|++++|+|++++|++++.|+.|++||+........... .....+. ....+ +|...|.
T Consensus 131 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~ 209 (377)
T 3dwl_C 131 QENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVH 209 (377)
T ss_dssp ----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEE
T ss_pred CcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEE
Confidence 432 123456666 999999999999999999999999999999975432211100 0000000 11233 7888999
Q ss_pred EEEEcCCCcEEEEEe
Q 021036 303 GMAVSPGNLVVAMVQ 317 (318)
Q Consensus 303 ~v~~sp~~~~l~~~~ 317 (318)
+++|+|++++|+++.
T Consensus 210 ~~~~sp~~~~l~~~~ 224 (377)
T 3dwl_C 210 AVGFSPSGNALAYAG 224 (377)
T ss_dssp EEEECTTSSCEEEEE
T ss_pred EEEECCCCCEEEEEe
Confidence 999999999999874
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.1e-28 Score=210.89 Aligned_cols=249 Identities=12% Similarity=0.128 Sum_probs=177.8
Q ss_pred CccceEEeeCCCceeEeecC---CCCCCCceecchhccccccccceeeeecccccCCCCcccccccC--CCCCccEEEEe
Q 021036 16 NTHPTVAASKSKGNSITKIP---SNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNG--SSNWFSILAVG 90 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~--~s~~~~~l~~g 90 (318)
+...+++++.|+++++||++ +++........ .+..+.|+|.. +...+.++. +++++++|++|
T Consensus 122 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~---------~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 122 NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE---------CIRKINLKNFG----KNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE---------EEEEEEGGGGS----SCCCEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEeCCCEEEEEEeccccCCceeeccccc---------eeEEEEccCcc----cccCceEEEEEEcCCCCEEEEE
Confidence 45678999999999999995 44443322211 12335565532 234455555 55677999999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeecc--ccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcc
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA--HNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQE 168 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 168 (318)
+.||.|++||+++++ .+..+.+ |...|++++| ++++++|++|+.||.|++||+++++
T Consensus 189 ~~d~~i~iwd~~~~~--------------~~~~~~~~~h~~~v~~~~~-------s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 189 TNLSRVIIFDIRTLE--------------RLQIIENSPRHGAVSSICI-------DEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp ETTSEEEEEETTTCC--------------EEEEEECCGGGCCEEEEEE-------CTTSCEEEEEETTSCEEEEETTTTE
T ss_pred eCCCeEEEEeCCCCe--------------eeEEEccCCCCCceEEEEE-------CCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 999999999999854 5566776 8999999999 8999999999999999999999988
Q ss_pred eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec--------
Q 021036 169 LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA-------- 240 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-------- 240 (318)
.+..+.. .+..+|.++++++.+. +++.+|++|+.||.|++| |.++++ .+..+.+
T Consensus 248 ~~~~~~~-------------~~~~~v~~~~~~~~~s-~~~~~l~s~~~dg~i~iw--d~~~~~--~~~~~~~~~~~~~~~ 309 (437)
T 3gre_A 248 LIRSWSF-------------GDHAPITHVEVCQFYG-KNSVIVVGGSSKTFLTIW--NFVKGH--CQYAFINSDEQPSME 309 (437)
T ss_dssp EEEEEBC-------------TTCEEEEEEEECTTTC-TTEEEEEEESTTEEEEEE--ETTTTE--EEEEEESSSSCCCGG
T ss_pred EEEEEec-------------CCCCceEEEEeccccC-CCccEEEEEcCCCcEEEE--EcCCCc--EEEEEEcCCCCCccc
Confidence 7776541 1233789997763333 678999999999999999 555555 3333332
Q ss_pred ------------------ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceee-eecCCCCCC-cc-----------
Q 021036 241 ------------------HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQ-VSIPTNTPG-LQ----------- 289 (318)
Q Consensus 241 ------------------h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~-~~----------- 289 (318)
|...|++++|+ ++++|++++.|+.|++||+.+++... +..+..... +.
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (437)
T 3gre_A 310 HFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTML 388 (437)
T ss_dssp GGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEE
T ss_pred eecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEE
Confidence 56678889999 77899999999999999998866443 222110000 00
Q ss_pred ----------ccccCCCcceeeeEEEEcCC--CcEEEEEe
Q 021036 290 ----------SCTDLPDAFVSCLGMAVSPG--NLVVAMVQ 317 (318)
Q Consensus 290 ----------~~~~~~~h~~~v~~v~~sp~--~~~l~~~~ 317 (318)
.......|...|++++|+++ +.+|++|.
T Consensus 389 ~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~ 428 (437)
T 3gre_A 389 LRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACD 428 (437)
T ss_dssp EEECC-------------CCCEEEEEEEESSSSEEEEEEE
T ss_pred EEecccccccccCcccccccceeeEeeeccCCceEEEEEc
Confidence 00122358999999999998 88999985
No 84
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=7e-28 Score=206.46 Aligned_cols=189 Identities=13% Similarity=0.027 Sum_probs=144.3
Q ss_pred EEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEE
Q 021036 21 VAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWR 100 (318)
Q Consensus 21 ~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 100 (318)
++++.|++|++||+++++++..+. +... +.+++|+|++ ++|++++.+ .+++|+
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~~-----~~~~---V~~v~fspdg------------------~~l~s~s~~-~~~~~~ 203 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEIE-----TRGE---VKDLHFSTDG------------------KVVAYITGS-SLEVIS 203 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEEE-----CSSC---CCEEEECTTS------------------SEEEEECSS-CEEEEE
T ss_pred EECCCCCEEEEeECCCCcEEEEeC-----CCCc---eEEEEEccCC------------------ceEEeccce-eEEEEE
Confidence 355679999999999887654432 2232 3346777766 999999855 566677
Q ss_pred ccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC----cEEEEECCCcceeeeeccc
Q 021036 101 ICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG----SVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~----~v~iwd~~~~~~~~~~~~~ 176 (318)
..+++. ........|...|.+++| ++++.++++++.|+ .+++|++..........
T Consensus 204 ~~~~~~------------~~~~~~~~~~~~v~~v~f-------spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~-- 262 (365)
T 4h5i_A 204 TVTGSC------------IARKTDFDKNWSLSKINF-------IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS-- 262 (365)
T ss_dssp TTTCCE------------EEEECCCCTTEEEEEEEE-------EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE--
T ss_pred eccCcc------------eeeeecCCCCCCEEEEEE-------cCCCCEEEEEecCCcceeEEeecccccceecceee--
Confidence 666542 233445678899999999 89999999999887 68888887654321110
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee-ecccCceeEEEEcCCCC
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY-NAHDQVVTGLAWAFDGC 255 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 255 (318)
.....|..+|++++|+ |+|++||+|+.|++|+|| |.++++ ++.++ .+|...|++++|+|||+
T Consensus 263 --------~~~~~~~~~V~~~~~S-----pdg~~lasgs~D~~V~iw--d~~~~~--~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 263 --------KQVTNRFKGITSMDVD-----MKGELAVLASNDNSIALV--KLKDLS--MSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp --------EEEESSCSCEEEEEEC-----TTSCEEEEEETTSCEEEE--ETTTTE--EEEEETTSSSSCEEEEEECTTSC
T ss_pred --------eeecCCCCCeEeEEEC-----CCCCceEEEcCCCEEEEE--ECCCCc--EEEEecCcccCCEEEEEECCCCC
Confidence 1123455689999999 999999999999999999 666766 56664 68999999999999999
Q ss_pred EEEEecCCCcEEEEEecCC
Q 021036 256 CLYSCSQDNFVRSWIFHGN 274 (318)
Q Consensus 256 ~l~s~~~d~~v~iwd~~~~ 274 (318)
+|++|+.|++|+|||+..+
T Consensus 326 ~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSEEEEEECCTT
T ss_pred EEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999653
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.7e-28 Score=210.66 Aligned_cols=246 Identities=15% Similarity=0.201 Sum_probs=171.3
Q ss_pred CccceEEeeCCCceeEeecCC---CCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecC
Q 021036 16 NTHPTVAASKSKGNSITKIPS---NCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGR 92 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~ 92 (318)
+...+++|+.|++|++||+.+ +....... .+.|... +.+++|+|++ ++|++|+.
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~--~~~h~~~---v~~~~~~~~~------------------~~l~s~s~ 131 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL--TYDCSST---VTQITMIPNF------------------DAFAVSSK 131 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE--EEECSSC---EEEEEECTTS------------------SEEEEEET
T ss_pred CCCEEEEecCCceEEEeECcccccCcccceee--eccCCCC---EEEEEEeCCC------------------CEEEEEeC
Confidence 566789999999999999876 33211111 1123333 3346666655 99999999
Q ss_pred CCcEEEEEcc---CCccccccccccCCceeEEeeec--c--ccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECC
Q 021036 93 SGKVSLWRIC---VPKCYSVEDCKVPTTAVLIGLFQ--A--HNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGY 165 (318)
Q Consensus 93 dg~i~iw~~~---~~~~~~~~~~~~~~~~~~~~~~~--~--h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~ 165 (318)
||.|++||++ +++...... ...+..+. . +...+.++.+.+ ++++.+|++++.|+.|++||++
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLN------CECIRKINLKNFGKNEYAVRMRAFV-----NEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEE------EEEEEEEEGGGGSSCCCEEEEEEEE-----CSSCEEEEEEETTSEEEEEETT
T ss_pred CCEEEEEEeccccCCceeeccc------cceeEEEEccCcccccCceEEEEEE-----cCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999995 433211000 01112221 1 455677776311 5788999999999999999999
Q ss_pred CcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeee-cccCc
Q 021036 166 IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN-AHDQV 244 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-~h~~~ 244 (318)
+++.+..+..+. |...|++++|+ |++.+|++|+.||.|++| |++.++ ++..+. .|...
T Consensus 201 ~~~~~~~~~~~~------------h~~~v~~~~~s-----~~~~~l~s~~~dg~i~iw--d~~~~~--~~~~~~~~~~~~ 259 (437)
T 3gre_A 201 TLERLQIIENSP------------RHGAVSSICID-----EECCVLILGTTRGIIDIW--DIRFNV--LIRSWSFGDHAP 259 (437)
T ss_dssp TCCEEEEEECCG------------GGCCEEEEEEC-----TTSCEEEEEETTSCEEEE--ETTTTE--EEEEEBCTTCEE
T ss_pred CCeeeEEEccCC------------CCCceEEEEEC-----CCCCEEEEEcCCCeEEEE--EcCCcc--EEEEEecCCCCc
Confidence 998887776421 34489999999 999999999999999999 566665 566665 67889
Q ss_pred eeEEEEcC----CCCEEEEecCCCcEEEEEecCCceee-eecCCCCCCcc---------ccccCCC--cceeeeEEEEcC
Q 021036 245 VTGLAWAF----DGCCLYSCSQDNFVRSWIFHGNSLSQ-VSIPTNTPGLQ---------SCTDLPD--AFVSCLGMAVSP 308 (318)
Q Consensus 245 v~~~~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~---------~~~~~~~--h~~~v~~v~~sp 308 (318)
|.+++|+| ++.+|++++.|+.|++||++++.... +..+....... ....+.+ |...|++++|+
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~- 338 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS- 338 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-
T ss_pred eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-
Confidence 99996664 57799999999999999998766443 33222111111 0012334 88999999999
Q ss_pred CCcEEEEEe
Q 021036 309 GNLVVAMVQ 317 (318)
Q Consensus 309 ~~~~l~~~~ 317 (318)
++++|++|.
T Consensus 339 ~~~~l~s~~ 347 (437)
T 3gre_A 339 NDKILLTDE 347 (437)
T ss_dssp TTEEEEEEG
T ss_pred CceEEEecC
Confidence 788888874
No 86
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=4.5e-27 Score=202.60 Aligned_cols=195 Identities=15% Similarity=0.084 Sum_probs=159.5
Q ss_pred cCCCCcccccccCCCCCc-cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC
Q 021036 67 RLSSKKYPVPQNGSSNWF-SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN 145 (318)
Q Consensus 67 ~~~~~~~~v~~~~~s~~~-~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 145 (318)
.+.+|...|.++++++++ ++|++|+.||.|+|||+.+++. .......+|...|.+++| ++
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~~h~~~v~~~~~-------~~ 128 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK------------TSFIQGMGPGDAITGMKF-------NQ 128 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC------------EEEECCCSTTCBEEEEEE-------ET
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc------------ceeeecCCcCCceeEEEe-------CC
Confidence 456788999999999998 9999999999999999997652 222333579999999999 77
Q ss_pred -CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEee
Q 021036 146 -PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWK 224 (318)
Q Consensus 146 -~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~ 224 (318)
++++|++++.|+.|++||+.+ .....+..+. .+...|.+++|+ |++.+|++|+.|+.|++||
T Consensus 129 ~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~-----------~~~~~v~~~~~~-----~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 129 FNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD-----------SWDYWYCCVDVS-----VSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp TEEEEEEEEETTTEEEEEETTS-CEEEEEECCC-----------CSSCCEEEEEEE-----TTTTEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEECCC-CceEEEeccC-----------CCCCCeEEEEEC-----CCCCEEEEECCCCCEEEEE
Confidence 779999999999999999985 3343333222 234579999999 9999999999999999995
Q ss_pred eccCCCeeeEeeeeecccCceeEEEEcCCCC-EEEEecCCCcEEEEEecC----CceeeeecCCCCCCccccccCCCcce
Q 021036 225 CDISCNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHG----NSLSQVSIPTNTPGLQSCTDLPDAFV 299 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~h~~ 299 (318)
+ + ++ ++..+.+|...|.+++|+|+++ +|++++.|+.|++||+++ +...... +|..
T Consensus 192 ~--~-~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------------~~~~ 251 (383)
T 3ei3_B 192 L--D-GH--EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM---------------PHEK 251 (383)
T ss_dssp T--T-SC--EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE---------------ECSS
T ss_pred C--C-CC--EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe---------------cCCC
Confidence 4 3 33 6677889999999999999999 999999999999999987 3333222 2445
Q ss_pred eeeEEEEcC-CCcEEEEEe
Q 021036 300 SCLGMAVSP-GNLVVAMVQ 317 (318)
Q Consensus 300 ~v~~v~~sp-~~~~l~~~~ 317 (318)
.|.+++|+| ++++|+++.
T Consensus 252 ~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 252 PVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp CEEEEEECTTTSCEEEEEE
T ss_pred ceEEEEEcCCCCCEEEEEc
Confidence 899999999 999999874
No 87
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.5e-27 Score=195.70 Aligned_cols=240 Identities=11% Similarity=-0.017 Sum_probs=158.3
Q ss_pred cceEEeeCCCceeEeecCCC---CCCCceecchhccccccccceeeeeccccc-------CCCCcccccccCCCCC----
Q 021036 18 HPTVAASKSKGNSITKIPSN---CCLPLITADQYASRSAMLHSLAVAWSPVLR-------LSSKKYPVPQNGSSNW---- 83 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~-------~~~~~~~v~~~~~s~~---- 83 (318)
.+.+......+|++|+..++ +++..... +... +..+.+.|+.. -.-+..+|..+.++|+
T Consensus 54 ~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~----~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~ 126 (356)
T 2w18_A 54 EPCIITACEDVVSLWKALDAWQWEKLYTWHF----AEVP---VLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESE 126 (356)
T ss_dssp EEEEEEEESSEEEEEEESSSSBEEEEEEEEC----CSSC---EEEECCCTTCCSCEEEEECSSSEEEEEEECC------C
T ss_pred ccEEEEeccceEEEcccCCCccceeeEEEec----cCce---eEEEEEcCcccceeeeeeccccccceEEEEECCCcccc
Confidence 34555555678999999987 34333333 2222 33366666321 1124567778888888
Q ss_pred ccEEEEecC--------------------CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCC
Q 021036 84 FSILAVGGR--------------------SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDS 143 (318)
Q Consensus 84 ~~~l~~g~~--------------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 143 (318)
++++++++. |+.|++|++.. +++.+..+.+|...++.++|+|.
T Consensus 127 ~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~-------------dG~~~~s~~~~~~~v~~l~fs~~---- 189 (356)
T 2w18_A 127 KQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE-------------DGGGKENQFLMPPEETILTFAEV---- 189 (356)
T ss_dssp CEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT-------------TSCEEEEEEECCCSSCEEEEEEE----
T ss_pred ccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC-------------CCceeeeeccCCCceeeEEeecc----
Confidence 777777653 55555555532 24566677788888999999221
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEE------------
Q 021036 144 SNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLL------------ 211 (318)
Q Consensus 144 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l------------ 211 (318)
..++++|++++.|++|+|||+.++++++++..+.. +...+.+++|+ |+|.++
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-----------~v~~v~~vafS-----pdG~~lvs~s~~~~~w~l 253 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-----------YQASVCHKAYS-----EMGLLFIVLSHPCAKESE 253 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC--------------CCCEEEEEE-----ETTEEEEEEC--------
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-----------ceeeeEEEEEC-----CCCCEEEEeccCCCccee
Confidence 12678999999999999999999999998865432 12267778898 888876
Q ss_pred EEEeCCCcEEEeeeccCCCeeeEeeee-----ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCC
Q 021036 212 AVGKGSGSFDLWKCDISCNKFDKVGSY-----NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTP 286 (318)
Q Consensus 212 ~~~~~dg~i~vw~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~ 286 (318)
++|+.|++|++| +..+++ .+..+ .+|...+.+..++ +.++++++.|++|+|||+.++++...
T Consensus 254 aSGs~D~tIklW--d~~tgk--~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~t------- 320 (356)
T 2w18_A 254 SLRSPVFQLIVI--NPKTTL--SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTAL------- 320 (356)
T ss_dssp ----CCEEEEEE--ETTTTE--EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEE-------
T ss_pred eccCCCcEEEEE--ECCCCE--EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEE-------
Confidence 668889999999 566766 33332 3566555444444 78999999999999999999876542
Q ss_pred CccccccCCCcceeee-EEEEcCCCcEEEEEe
Q 021036 287 GLQSCTDLPDAFVSCL-GMAVSPGNLVVAMVQ 317 (318)
Q Consensus 287 ~~~~~~~~~~h~~~v~-~v~~sp~~~~l~~~~ 317 (318)
+.+|...+. .++|+|||++|++|.
T Consensus 321 -------L~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 321 -------LPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp -------ECCC--CCCCEEEECSSSSEEEEEC
T ss_pred -------ecCCCCCeEEEEEECCCCCEEEEEE
Confidence 223444444 689999999999984
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2.5e-27 Score=200.71 Aligned_cols=234 Identities=13% Similarity=0.076 Sum_probs=173.5
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCcc-EEEEecCCCc
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFS-ILAVGGRSGK 95 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~-~l~~g~~dg~ 95 (318)
...+++++.|+.+++||+.+++....... ...+... +.+++|+|++ + +|++|+.||.
T Consensus 23 ~~~l~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~~---v~~~~~~~~~------------------~~~l~~~~~dg~ 80 (342)
T 1yfq_A 23 KSLLLITSWDGSLTVYKFDIQAKNVDLLQ-SLRYKHP---LLCCNFIDNT------------------DLQIYVGTVQGE 80 (342)
T ss_dssp GTEEEEEETTSEEEEEEEETTTTEEEEEE-EEECSSC---EEEEEEEESS------------------SEEEEEEETTSC
T ss_pred CCEEEEEcCCCeEEEEEeCCCCcccccee-eeecCCc---eEEEEECCCC------------------CcEEEEEcCCCe
Confidence 45689999999999999987652111111 1123333 4457777766 9 9999999999
Q ss_pred EEEEEc-cCCccccccccccCCceeEEeeecc--ccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC------
Q 021036 96 VSLWRI-CVPKCYSVEDCKVPTTAVLIGLFQA--HNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI------ 166 (318)
Q Consensus 96 i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~------ 166 (318)
|++|++ .+++ ...+.+ |...|.+++| ++ +.+|++++.|+.|++||+++
T Consensus 81 i~~wd~~~~~~---------------~~~~~~~~~~~~v~~l~~-------~~-~~~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 81 ILKVDLIGSPS---------------FQALTNNEANLGICRICK-------YG-DDKLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp EEEECSSSSSS---------------EEECBSCCCCSCEEEEEE-------ET-TTEEEEEETTSEEEEECHHHHTTBCE
T ss_pred EEEEEeccCCc---------------eEeccccCCCCceEEEEe-------CC-CCEEEEEcCCCeEEEEcccccccccc
Confidence 999999 7643 256677 9999999999 77 88999999999999999887
Q ss_pred ---cceeeeeccccccc-----------------------------ccceeeeeecccceeEEEEeeccCCC-CceEEEE
Q 021036 167 ---QELQKSAEAHCVPF-----------------------------SLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAV 213 (318)
Q Consensus 167 ---~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~ 213 (318)
++....+. +.... .........+...+.+++|+ | +++++++
T Consensus 138 ~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-----~~~~~~l~~ 211 (342)
T 1yfq_A 138 AVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-----PKEQEGYAC 211 (342)
T ss_dssp EEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-----SGGGCEEEE
T ss_pred cccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC-----CCCCCEEEE
Confidence 55443332 11100 00111233456789999999 9 9999999
Q ss_pred EeCCCcEEEeeeccC--CCeeeEeeeeecccC---------ceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecC
Q 021036 214 GKGSGSFDLWKCDIS--CNKFDKVGSYNAHDQ---------VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIP 282 (318)
Q Consensus 214 ~~~dg~i~vw~~~~~--~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 282 (318)
++.||.|++|+++.. .........+..|.. .|.+++|+|++++|++++.||.|++||+.+++...
T Consensus 212 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~---- 287 (342)
T 1yfq_A 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK---- 287 (342)
T ss_dssp EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE----
T ss_pred EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhh----
Confidence 999999999977654 100124556666754 99999999999999999999999999998876543
Q ss_pred CCCCCccccccCCCc-ceeeeEEEEcCCCcEEEEEe
Q 021036 283 TNTPGLQSCTDLPDA-FVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 283 ~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+.+| ...|.+++ |++++|+++.
T Consensus 288 ----------~~~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 288 ----------NFAKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp ----------ECCCCSSSEEEEEE--ECSSEEEEEE
T ss_pred ----------hhhcccCCCceEec--CCCCeEEEEe
Confidence 22334 67999999 9999999874
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=6e-27 Score=230.00 Aligned_cols=221 Identities=19% Similarity=0.239 Sum_probs=173.2
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++||+.+++.+..+.. |... +.+++|+|++ ++|++|+.||.
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~----h~~~---v~~~~~s~~~------------------~~l~s~~~d~~ 680 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKA----HEDE---VLCCAFSSDD------------------SYIATCSADKK 680 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECC----CSSC---EEEEEECTTS------------------SEEEEEETTSE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEecc----CCCC---EEEEEEecCC------------------CEEEEEeCCCe
Confidence 445679999999999999998876444432 3332 3345666655 99999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC--CCcEEEEEeCCCcEEEEECCCcceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN--PQVLLVTGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
|++||+.++ +.+..+.+|...|.+++| ++ ++.++++|+.|+.|++||+.+++....+
T Consensus 681 v~vwd~~~~--------------~~~~~~~~~~~~v~~~~~-------~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 681 VKIWDSATG--------------KLVHTYDEHSEQVNCCHF-------TNKSNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp EEEEETTTC--------------CEEEEEECCSSCEEEEEE-------CSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred EEEEECCCC--------------ceEEEEcCCCCcEEEEEE-------ecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 999999985 466788899999999999 66 5568999999999999999999887776
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeE-------------------
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDK------------------- 234 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~------------------- 234 (318)
..|. ..|.+++|+ |++.++++++.||.|++||+. ++....
T Consensus 740 ~~h~--------------~~v~~~~~s-----p~~~~l~s~s~dg~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1249)
T 3sfz_A 740 FGHT--------------NSVNHCRFS-----PDDELLASCSADGTLRLWDVR--SANERKSINVKRFFLSSEDPPEDVE 798 (1249)
T ss_dssp CCCS--------------SCEEEEEEC-----SSTTEEEEEESSSEEEEEEGG--GTEEEEEEECCCCC--------CCC
T ss_pred cCCC--------------CCEEEEEEe-----cCCCEEEEEECCCeEEEEeCC--CCcccceecccccccccCCcccccc
Confidence 6544 489999999 999999999999999999643 322100
Q ss_pred ---------------------------------eeee-ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee
Q 021036 235 ---------------------------------VGSY-NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 235 ---------------------------------~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 280 (318)
+..+ .+|...|.+++|+|++.++++++.|+.|++||+.++....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~-- 876 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVA-- 876 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEE--
T ss_pred ceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceee--
Confidence 0111 2567788888888888888888888888888887765442
Q ss_pred cCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 281 IPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 281 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+.+|...|.+++|+|+|++|+++.
T Consensus 877 ------------~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 877 ------------DCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp ------------EECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ------------ecCCCccceEEEEECCCCCEEEEEe
Confidence 2334667999999999999999874
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=1.1e-26 Score=204.37 Aligned_cols=154 Identities=20% Similarity=0.308 Sum_probs=110.6
Q ss_pred eEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEE
Q 021036 119 VLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLS 198 (318)
Q Consensus 119 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 198 (318)
+.+..+.+|...|.++.| ++.++++++.|+.|++||+++++....+..+ ...+.++.
T Consensus 270 ~~~~~~~~~~~~v~~~~~---------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------------~~~v~~~~ 326 (445)
T 2ovr_B 270 TCLHTLQGHTNRVYSLQF---------DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--------------QSLTSGME 326 (445)
T ss_dssp EEEEEECCCSSCEEEEEE---------CSSEEEEEETTSCEEEEETTTCCEEEEECCC--------------CSCEEEEE
T ss_pred cEeEEecCCCCceEEEEE---------CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC--------------cccEEEEE
Confidence 344555666666666666 3456677777777777777666665555433 33666666
Q ss_pred EeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec---ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCc
Q 021036 199 LILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA---HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 275 (318)
++ ++++++|+.||.|++| +.++++ .+..+.+ |...|++++|+ +.+|++++.||.|++||+.+++
T Consensus 327 ~~-------~~~l~~~~~dg~i~vw--d~~~~~--~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 327 LK-------DNILVSGNADSTVKIW--DIKTGQ--CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp EE-------TTEEEEEETTSCEEEE--ETTTCC--EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred Ee-------CCEEEEEeCCCeEEEE--ECCCCc--EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc
Confidence 64 5699999999999999 555655 5566665 88899999996 5799999999999999999876
Q ss_pred eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 276 LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
........ ...+|.+.|.+++|+|++.++|+|.
T Consensus 394 ~~~~~~~~---------~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 394 FIRNLVTL---------ESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp EEEEEEEC---------TTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred eeeeeecc---------ccCCCCceEEEEEecCCEEEEEEcc
Confidence 55432110 0123567999999999999999874
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=3.8e-27 Score=205.71 Aligned_cols=211 Identities=19% Similarity=0.265 Sum_probs=166.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeeccc-----------------------ccCCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPV-----------------------LRLSSKK 72 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~-----------------------~~~~~~~ 72 (318)
+...+++|+.|++|++||+++++++..+.. |... +.++.|++. ..+.+|.
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~----h~~~---v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~ 230 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTS----HSAR---VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS 230 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC----CSSC---EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeC----CCCc---eEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccc
Confidence 456689999999999999999887665543 2222 112333321 1145788
Q ss_pred ccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEE
Q 021036 73 YPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLV 151 (318)
Q Consensus 73 ~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~ 151 (318)
..+..+.++++++++++++.||.|++|+..+++.. ...+.....|...|.+++| ++ ++.+++
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~----------~~~~~~~~~~~~~V~~~~~-------~p~~~~~la 293 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG----------WVPLQTFTQHQGAVKAVAW-------CPWQSNVLA 293 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC----------SCCSEEECCCSSCEEEEEE-------CTTCTTEEE
T ss_pred cceeeeeecCCCCeeeeeeccccceEEeecccccc----------ceeeeeecccCCceeeeee-------CCCcccEEE
Confidence 89999999999999999999999999999876532 2344567789999999999 44 345665
Q ss_pred EE--eCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe--CCCcEEEeeecc
Q 021036 152 TG--SSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK--GSGSFDLWKCDI 227 (318)
Q Consensus 152 s~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~--~dg~i~vw~~~~ 227 (318)
++ +.|++|++||+.++++...+..+. .+.++.|+ ++++.+++++ .|+.|++| +.
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~~~~~~~~~---------------~v~~~~~~-----~~~~~lv~~sg~~d~~I~iw--d~ 351 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGACLSAVDAHS---------------QVCSILWS-----PHYKELISGHGFAQNQLVIW--KY 351 (420)
T ss_dssp EEECTTTCEEEEEETTTTEEEEEEECSS---------------CEEEEEEE-----TTTTEEEEEECTTTCCEEEE--ET
T ss_pred EEeecCCCEEEEEeCCccccceeecccc---------------ceeeeeec-----CCCCeEEEEEecCCCEEEEE--EC
Confidence 54 579999999999998877765443 68889998 8888777765 79999999 55
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCC
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGN 274 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 274 (318)
.+++ ++.++.+|.+.|++++|+|+|++|+||+.|++|++||+...
T Consensus 352 ~~~~--~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 352 PTMA--KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TTCC--EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 6665 78889999999999999999999999999999999998753
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.4e-27 Score=205.03 Aligned_cols=209 Identities=11% Similarity=0.037 Sum_probs=155.7
Q ss_pred CCCCcccccccCCCCCccEE-EEecCCCcEEEEEcc--CCccccccccccCCceeEEeeec--cccccEEEEEeeeecCC
Q 021036 68 LSSKKYPVPQNGSSNWFSIL-AVGGRSGKVSLWRIC--VPKCYSVEDCKVPTTAVLIGLFQ--AHNSWITSISLAVLSSD 142 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l-~~g~~dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~ 142 (318)
...|...|.++++++++++| ++|+.||.|++|++. +++ .+..+. .|...|.+++|
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--------------~~~~~~~~~~~~~v~~~~~------ 157 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--------------VLKLRKRFCFSKRPNAISI------ 157 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--------------CEEEEEEEECSSCEEEEEE------
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--------------eeeeeecccCCCCceEEEE------
Confidence 34566789999999999996 899999999999998 654 334443 56789999999
Q ss_pred CCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC---ceEEEEEeCCCc
Q 021036 143 SSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR---LMLLAVGKGSGS 219 (318)
Q Consensus 143 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~---~~~l~~~~~dg~ 219 (318)
++++++|++++.||.|++|++.+++..... ......|...|++++|+ |+ +.+|++|+.|+.
T Consensus 158 -sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~----------~~~~~~h~~~v~~~~~s-----p~~~~~~~l~s~~~d~~ 221 (450)
T 2vdu_B 158 -AEDDTTVIIADKFGDVYSIDINSIPEEKFT----------QEPILGHVSMLTDVHLI-----KDSDGHQFIITSDRDEH 221 (450)
T ss_dssp -CTTSSEEEEEETTSEEEEEETTSCCCSSCC----------CCCSEECSSCEEEEEEE-----ECTTSCEEEEEEETTSC
T ss_pred -cCCCCEEEEEeCCCcEEEEecCCccccccc----------ceeeecccCceEEEEEc-----CCCCCCcEEEEEcCCCc
Confidence 899999999999999999999877644300 01123456689999999 88 999999999999
Q ss_pred EEEeeeccCCCeeeEeee-eecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee-cCCCCCCcc--------
Q 021036 220 FDLWKCDISCNKFDKVGS-YNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS-IPTNTPGLQ-------- 289 (318)
Q Consensus 220 i~vw~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~-------- 289 (318)
|++|++ ++++ .+.. +.+|...|.+++|+ ++.+|++++.|++|++||+.++...... .......+.
T Consensus 222 i~vwd~--~~~~--~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 222 IKISHY--PQCF--IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPP 296 (450)
T ss_dssp EEEEEE--SCTT--CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC--
T ss_pred EEEEEC--CCCc--eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccc
Confidence 999954 4544 3444 55899999999999 9999999999999999999987654322 110000000
Q ss_pred --ccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 290 --SCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 290 --~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
...........|.+++|+|++++|+++.
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp --------CBCCCEEEEEECSSSSEEEEEE
T ss_pred cccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 0000112345789999999999998863
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-26 Score=197.17 Aligned_cols=228 Identities=16% Similarity=0.089 Sum_probs=176.2
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC--
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS-- 93 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d-- 93 (318)
+...+++++.|+.+++||+.+++.+..+. +... +.+++|+|++ ++|++++.+
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~---v~~~~~~~~~------------------~~l~~~~~~~~ 138 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWK-----SPVP---VKRVEFSPCG------------------NYFLAILDNVM 138 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEE-----CSSC---EEEEEECTTS------------------SEEEEEECCBT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEee-----cCCC---eEEEEEccCC------------------CEEEEecCCcc
Confidence 45678999999999999999887655543 2222 4457777777 999999998
Q ss_pred ---CcEEEEEccCCccccccccccCCceeEEeeeccccc--cEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC-c
Q 021036 94 ---GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS--WITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-Q 167 (318)
Q Consensus 94 ---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~ 167 (318)
|.|++|++..+......... .......+..|.. .+.+++| ++++++|++++.||.|++||+++ +
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~ 208 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKV---SEEPIHKIITHEGLDAATVAGW-------STKGKYIIAGHKDGKISKYDVSNNY 208 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEE---CSSCSEEEECCTTCCCEEEEEE-------CGGGCEEEEEETTSEEEEEETTTTT
T ss_pred CCCCEEEEEEecCCccceeeccc---ccceeeeccCCcCccceeEEEE-------cCCCCEEEEEcCCCEEEEEECCCCc
Confidence 99999999876532110000 0112334555665 9999999 89999999999999999999998 5
Q ss_pred ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeE
Q 021036 168 ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTG 247 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~ 247 (318)
+....+..+ ...|.+++|+ |++.+|++++.||.|++| |.++.+ .+..+. +...+..
T Consensus 209 ~~~~~~~~~--------------~~~v~~~~~~-----~~~~~l~~~~~d~~i~v~--d~~~~~--~~~~~~-~~~~~~~ 264 (369)
T 3zwl_B 209 EYVDSIDLH--------------EKSISDMQFS-----PDLTYFITSSRDTNSFLV--DVSTLQ--VLKKYE-TDCPLNT 264 (369)
T ss_dssp EEEEEEECC--------------SSCEEEEEEC-----TTSSEEEEEETTSEEEEE--ETTTCC--EEEEEE-CSSCEEE
T ss_pred EeEEEEecC--------------CCceeEEEEC-----CCCCEEEEecCCceEEEE--ECCCCc--eeeeec-CCCCcee
Confidence 555555443 4489999999 999999999999999999 555655 444554 7788999
Q ss_pred EEEcCCCCEEEEecCCC--------------cEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEE
Q 021036 248 LAWAFDGCCLYSCSQDN--------------FVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVV 313 (318)
Q Consensus 248 ~~~~~~~~~l~s~~~d~--------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 313 (318)
++|+|+++++++++.++ .+++||+.++..... +.+|...|.+++|+|++++|
T Consensus 265 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--------------~~~~~~~v~~~~~s~~~~~l 330 (369)
T 3zwl_B 265 AVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR--------------VQGHFGPLNTVAISPQGTSY 330 (369)
T ss_dssp EEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE--------------EECCSSCEEEEEECTTSSEE
T ss_pred EEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh--------------eecccCcEEEEEECCCCCEE
Confidence 99999999999999888 899999887665432 22355689999999999999
Q ss_pred EEEe
Q 021036 314 AMVQ 317 (318)
Q Consensus 314 ~~~~ 317 (318)
+++.
T Consensus 331 ~s~~ 334 (369)
T 3zwl_B 331 ASGG 334 (369)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9874
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=6.4e-27 Score=202.35 Aligned_cols=207 Identities=18% Similarity=0.176 Sum_probs=161.5
Q ss_pred Cccc-eEEeeCCCceeEeecCC------CCCCCceecchhccccccccceeeeecccccC-------CCCcccccccCCC
Q 021036 16 NTHP-TVAASKSKGNSITKIPS------NCCLPLITADQYASRSAMLHSLAVAWSPVLRL-------SSKKYPVPQNGSS 81 (318)
Q Consensus 16 ~~~~-~~t~s~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~-------~~~~~~v~~~~~s 81 (318)
+... +++++.|+.+++||+.+ ++.+. |.|...+ ..|...|.+++++
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~ 195 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLN--------------------WSPTLELQGTVESPMTPSQFATSVDIS 195 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--------------------CCCEEEEEEEECCSSSSCCCCCEEEEC
T ss_pred CCceEEEEEeCCCcEEEEeCCccccccccceee--------------------ccCcceeeeeeccccCCCCCceEEEEC
Confidence 3445 89999999999999987 43322 2222222 3467788888899
Q ss_pred CCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecc---c---cccEEEEEeeeecCCCCCCCcEEEEEeC
Q 021036 82 NWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA---H---NSWITSISLAVLSSDSSNPQVLLVTGSS 155 (318)
Q Consensus 82 ~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~p~~~~~~~~~~~l~s~~~ 155 (318)
+++ +|++++.||.|++||+.++ +.+..+.. | ...|.+++| ++++++|++++.
T Consensus 196 ~~~-~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~~~h~~~~~~i~~i~~-------~~~~~~l~~~~~ 253 (397)
T 1sq9_A 196 ERG-LIATGFNNGTVQISELSTL--------------RPLYNFESQHSMINNSNSIRSVKF-------SPQGSLLAIAHD 253 (397)
T ss_dssp TTS-EEEEECTTSEEEEEETTTT--------------EEEEEEECCC---CCCCCEEEEEE-------CSSTTEEEEEEE
T ss_pred CCc-eEEEEeCCCcEEEEECCCC--------------ceeEEEeccccccccCCccceEEE-------CCCCCEEEEEec
Confidence 889 9999999999999999874 45667777 8 999999999 889999999999
Q ss_pred C---CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCee
Q 021036 156 D---GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKF 232 (318)
Q Consensus 156 d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 232 (318)
| +.|++||+++++.+..+.....+.... .....|...|.+++|+ |++++|++++.||.|++| +.++.+
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~-----~~~~~l~~~~~dg~i~iw--d~~~~~- 324 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQAS-LGEFAHSSWVMSLSFN-----DSGETLCSAGWDGKLRFW--DVKTKE- 324 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC---------CCBSBSSCEEEEEEC-----SSSSEEEEEETTSEEEEE--ETTTTE-
T ss_pred CCCCceEEEEECCCCcccceeccCccccccc-ccccccCCcEEEEEEC-----CCCCEEEEEeCCCeEEEE--EcCCCc-
Confidence 9 999999999988777765411000000 0001145689999999 999999999999999999 566665
Q ss_pred eEeeeee------cc---------------cCceeEEEEcCCC----------CEEEEecCCCcEEEEEecCC
Q 021036 233 DKVGSYN------AH---------------DQVVTGLAWAFDG----------CCLYSCSQDNFVRSWIFHGN 274 (318)
Q Consensus 233 ~~~~~~~------~h---------------~~~v~~~~~~~~~----------~~l~s~~~d~~v~iwd~~~~ 274 (318)
.+..+. +| ...|++++|+|++ ++|++++.||.|++|++.++
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 325 -RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp -EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred -eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 666777 77 8999999999998 79999999999999999875
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8e-27 Score=221.06 Aligned_cols=226 Identities=13% Similarity=0.061 Sum_probs=158.7
Q ss_pred ceEEeeCCCceeEeecCCCCCCCc-eecc--hhccccccccceeeeeccc----------------ccCCCCcccccccC
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPL-ITAD--QYASRSAMLHSLAVAWSPV----------------LRLSSKKYPVPQNG 79 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~w~p~----------------~~~~~~~~~v~~~~ 79 (318)
.+++++.|+++++||+.++..... .... -..+... +.++++++. ..+.+|...+..++
T Consensus 366 ~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~---v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~ 442 (902)
T 2oaj_A 366 LILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPL---ATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKL 442 (902)
T ss_dssp EEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTB---EEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCC
T ss_pred eEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCC---eeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccc
Confidence 578889999999999987642211 1000 0012121 333444321 12567888899999
Q ss_pred CCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeec-----cccccEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 80 SSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-----AHNSWITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 80 ~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
+++++++|++|+.||+|++||+.++.... .......+. +|...|++++| ++++++|++|+
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~--------~~~~~~~l~~~~~~~h~~~V~svaf-------spdg~~LAsgs 507 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQD--------NASFEVNLSRTLNKAKELAVDKISF-------AAETLELAVSI 507 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTT--------TBCEEEEHHHHTTCSSSCCEEEEEE-------ETTTTEEEEEE
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccC--------CceEEeechhhcCCCCCCceeEEEe-------cCCCCeEEEEe
Confidence 99999999999999999999999864210 000111122 78999999999 99999999999
Q ss_pred CCCcEEEEECCCcceeee----------ecc-----------------ccc-----ccccceeeeeecccceeEEEEeec
Q 021036 155 SDGSVRIWDGYIQELQKS----------AEA-----------------HCV-----PFSLLKEVVTVNTVPISVLSLILP 202 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~~~~----------~~~-----------------~~~-----~~~~~~~~~~~~~~~v~~l~~~~~ 202 (318)
.||+|+|||+.+++.... +.. ... .+.+ ......|...|++++|+
T Consensus 508 ~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~l~~h~~~V~svafS-- 584 (902)
T 2oaj_A 508 ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMP-STAVHANKGKTSAINNS-- 584 (902)
T ss_dssp TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEE-EEEECCCSCSEEEEEEC--
T ss_pred cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccce-eEEEEcCCCcEEEEEec--
Confidence 999999999987632100 000 000 0000 12345688899999999
Q ss_pred cCCCCceEEEEEeCCCcEEEeeeccCCCeeeE---eeeee-cccCceeEEEEc-----CCC---CEEEEecCCCcEEEEE
Q 021036 203 VQSPRLMLLAVGKGSGSFDLWKCDISCNKFDK---VGSYN-AHDQVVTGLAWA-----FDG---CCLYSCSQDNFVRSWI 270 (318)
Q Consensus 203 ~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~---~~~~~-~h~~~v~~~~~~-----~~~---~~l~s~~~d~~v~iwd 270 (318)
|+| +||+|+.|++|++|| .++..... +..+. +|...|++++|+ ||| .+|++|+.|++|++||
T Consensus 585 ---pdG-~lAsgs~D~tv~lwd--~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 585 ---NIG-FVGIAYAAGSLMLID--RRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp ---BTS-EEEEEETTSEEEEEE--TTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred ---CCc-EEEEEeCCCcEEEEE--CCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 999 999999999999994 55554211 12343 899999999999 885 7999999999999999
Q ss_pred e
Q 021036 271 F 271 (318)
Q Consensus 271 ~ 271 (318)
+
T Consensus 659 ~ 659 (902)
T 2oaj_A 659 I 659 (902)
T ss_dssp E
T ss_pred E
Confidence 9
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=4e-26 Score=201.65 Aligned_cols=227 Identities=19% Similarity=0.237 Sum_probs=172.3
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeec---------------------ccc-----------
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWS---------------------PVL----------- 66 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~---------------------p~~----------- 66 (318)
.+++|+.|+++++||+++++++..+.. |... +.+++|+ ...
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~----h~~~---v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~ 247 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEG----HNST---VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 247 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECC----CSSC---EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------C
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECC----CCCc---cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccC
Confidence 789999999999999998876555432 2222 2223333 211
Q ss_pred -----------------cCCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccc
Q 021036 67 -----------------RLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS 129 (318)
Q Consensus 67 -----------------~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 129 (318)
.+.+|...|.++ +++++++++|+.||.|++||+.++ +.+..+.+|..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~--------------~~~~~~~~~~~ 311 (464)
T 3v7d_B 248 DYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM--------------KCLYILSGHTD 311 (464)
T ss_dssp CSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT--------------EEEEEECCCSS
T ss_pred CcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC--------------cEEEEecCCCC
Confidence 123455555555 567899999999999999999874 46678889999
Q ss_pred cEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCce
Q 021036 130 WITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM 209 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~ 209 (318)
.|.+++| ++++++|++|+.||.|++||+++++.+..+..|. ..|.++.++ +.
T Consensus 312 ~v~~~~~-------~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--------------~~v~~~~~~-------~~ 363 (464)
T 3v7d_B 312 RIYSTIY-------DHERKRCISASMDTTIRIWDLENGELMYTLQGHT--------------ALVGLLRLS-------DK 363 (464)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS--------------SCEEEEEEC-------SS
T ss_pred CEEEEEE-------cCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC--------------CcEEEEEEc-------CC
Confidence 9999999 8899999999999999999999998887776554 378888886 47
Q ss_pred EEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCcc
Q 021036 210 LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQ 289 (318)
Q Consensus 210 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 289 (318)
+|++++.||.|++|| .++.. ..... .+...+..++|+|++.++++++ |+.|++||+.+++......
T Consensus 364 ~l~s~s~dg~v~vwd--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~-------- 429 (464)
T 3v7d_B 364 FLVSAAADGSIRGWD--ANDYS--RKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANI-------- 429 (464)
T ss_dssp EEEEEETTSEEEEEE--TTTCC--EEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCT--------
T ss_pred EEEEEeCCCcEEEEE--CCCCc--eeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhh--------
Confidence 999999999999994 55544 22232 3666788899999999999998 8999999999987764322
Q ss_pred ccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 290 SCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 290 ~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
..|...|.+++|+ +..+++++
T Consensus 430 -----~~~~~~v~~v~~~-~~~l~~~~ 450 (464)
T 3v7d_B 430 -----LKDADQIWSVNFK-GKTLVAAV 450 (464)
T ss_dssp -----TTTCSEEEEEEEE-TTEEEEEE
T ss_pred -----ccCCCcEEEEEec-CCEEEEEE
Confidence 2245699999998 33444443
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=3.7e-26 Score=208.39 Aligned_cols=239 Identities=13% Similarity=0.096 Sum_probs=178.8
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEec
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG 91 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~ 91 (318)
+.+.+...+++++.|+.+++||+.+++.+..+.. |......+.+++|+|+. +++|++++
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~-----------------~~~l~~~~ 226 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT----HHKQGSFVRDVEFSPDS-----------------GEFVITVG 226 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS----SSCTTCCEEEEEECSTT-----------------CCEEEEEE
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc----cCCCCceEEEEEECCCC-----------------CCEEEEEe
Confidence 3333444789999999999999887765444332 22200023446666661 49999999
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEeee-c---cccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCc
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF-Q---AHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQ 167 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 167 (318)
.||.|++||+.+++ .+..+ . .|...|.+++| + ++++|++++.|+.|++||++++
T Consensus 227 ~dg~i~vwd~~~~~--------------~~~~~~~~~~~~~~~v~~~~~-------~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 227 SDRKISCFDGKSGE--------------FLKYIEDDQEPVQGGIFALSW-------L-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp TTCCEEEEETTTCC--------------EEEECCBTTBCCCSCEEEEEE-------S-SSSEEEEEETTSEEEEEETTTT
T ss_pred CCCeEEEEECCCCC--------------EeEEecccccccCCceEEEEE-------c-CCCEEEEEcCCCcEEEEECCCC
Confidence 99999999998854 55566 5 89999999999 7 8999999999999999999876
Q ss_pred ceeeeecccc---------------------------------------------ccc----------------------
Q 021036 168 ELQKSAEAHC---------------------------------------------VPF---------------------- 180 (318)
Q Consensus 168 ~~~~~~~~~~---------------------------------------------~~~---------------------- 180 (318)
+....+..+. .++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~ 364 (615)
T 1pgu_A 285 KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSS 364 (615)
T ss_dssp EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTT
T ss_pred cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEc
Confidence 5544332220 000
Q ss_pred ----------------------------------cc--------------------------------------------
Q 021036 181 ----------------------------------SL-------------------------------------------- 182 (318)
Q Consensus 181 ----------------------------------~~-------------------------------------------- 182 (318)
..
T Consensus 365 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (615)
T 1pgu_A 365 SSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 444 (615)
T ss_dssp TEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred hhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecc
Confidence 00
Q ss_pred ---------------------ce--------------eeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 183 ---------------------LK--------------EVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 183 ---------------------~~--------------~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
.. .....|...|.+++|+ |++++|++++.||.|++| +.
T Consensus 445 ~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s-----~~g~~l~~~~~dg~i~iw--~~ 517 (615)
T 1pgu_A 445 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS-----PSETYIAAGDVMGKILLY--DL 517 (615)
T ss_dssp CSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEEC-----TTSSEEEEEETTSCEEEE--ET
T ss_pred cCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEEC-----CCCCEEEEcCCCCeEEEe--eC
Confidence 00 1112356678899998 999999999999999999 56
Q ss_pred CCCeeeEeeeeec-ccCceeEEEEcC----------CCCEEEEecCCCcEEEEEecCC-ceeeeecCCCCCCccccccCC
Q 021036 228 SCNKFDKVGSYNA-HDQVVTGLAWAF----------DGCCLYSCSQDNFVRSWIFHGN-SLSQVSIPTNTPGLQSCTDLP 295 (318)
Q Consensus 228 ~~~~~~~~~~~~~-h~~~v~~~~~~~----------~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~ 295 (318)
.+++ .+..+.+ |...|++++|+| ++++|++++.|+.|++||+.++ .... .+.
T Consensus 518 ~~~~--~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------------~~~ 581 (615)
T 1pgu_A 518 QSRE--VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK--------------ALN 581 (615)
T ss_dssp TTTE--EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEE--------------ETT
T ss_pred CCCc--ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceech--------------hhh
Confidence 6666 5667777 999999999999 9999999999999999999875 3322 234
Q ss_pred CcceeeeEEEEcCCCcEEEEEe
Q 021036 296 DAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 296 ~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+|...|++++|+|+++ |+++.
T Consensus 582 ~h~~~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 582 AHKDGVNNLLWETPST-LVSSG 602 (615)
T ss_dssp SSTTCEEEEEEEETTE-EEEEE
T ss_pred cCccceEEEEEcCCCC-eEEec
Confidence 4667999999999999 88774
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.1e-27 Score=218.15 Aligned_cols=200 Identities=18% Similarity=0.213 Sum_probs=161.6
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP- 146 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~- 146 (318)
+.+|..+|+++++++++++|++|+.||.|++|++..+. .+....+.+|.++|++++| +++
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~------------~~~~~~l~~h~~~V~~l~~-------s~~~ 65 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGPVWRVDW-------AHPK 65 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE------------EEEEEEECCCSSCEEEEEE-------CCTT
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC------------CccceeccCCcCceEEEEe-------cCCC
Confidence 45788899999999999999999999999999998543 5677888999999999999 666
Q ss_pred -CcEEEEEeCCCcEEEEECCCcc--eeeeecccccccccceeeeeecccceeEEEEeeccCCCC--ceEEEEEeCCCcEE
Q 021036 147 -QVLLVTGSSDGSVRIWDGYIQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR--LMLLAVGKGSGSFD 221 (318)
Q Consensus 147 -~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~--~~~l~~~~~dg~i~ 221 (318)
+++|++|+.||.|++||+.+++ ....+. .|..+|.+++|+ |+ +..+++|+.||.|+
T Consensus 66 ~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~--------------~h~~~V~~v~~s-----p~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 66 FGTILASCSYDGKVLIWKEENGRWSQIAVHA--------------VHSASVNSVQWA-----PHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp SCSEEEEEETTSCEEEEEEETTEEEEEEEEC--------------CCSSCEEEEEEC-----CGGGCSEEEEEETTSEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCccccccccc--------------CCCCCeEEEEEC-----CCCCCCEEEEEeCCCcEE
Confidence 8999999999999999998875 333333 345589999999 88 99999999999999
Q ss_pred EeeeccCCCeeeEeeeeecccCceeEEEEcC-------------CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCc
Q 021036 222 LWKCDISCNKFDKVGSYNAHDQVVTGLAWAF-------------DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGL 288 (318)
Q Consensus 222 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-------------~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 288 (318)
+|++ +.........+.+|...|.+++|+| ++.++++|+.||.|++||++++.......
T Consensus 127 vwdl--~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~------- 197 (753)
T 3jro_A 127 VVEF--KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE------- 197 (753)
T ss_dssp EEEC--CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE-------
T ss_pred EEEe--ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee-------
Confidence 9954 4442224456778999999999999 58899999999999999998753221110
Q ss_pred cccccCCCcceeeeEEEEcCC---CcEEEEEe
Q 021036 289 QSCTDLPDAFVSCLGMAVSPG---NLVVAMVQ 317 (318)
Q Consensus 289 ~~~~~~~~h~~~v~~v~~sp~---~~~l~~~~ 317 (318)
..+.+|...|++++|+|+ +.+|++|.
T Consensus 198 ---~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 198 ---STLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp ---EEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ---eeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 123346779999999999 89999874
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=3.5e-26 Score=224.61 Aligned_cols=204 Identities=20% Similarity=0.280 Sum_probs=163.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++++.|++|++||+.+++.+..+.. |... +.+++|+|.+ ++.++++|+.||.
T Consensus 668 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~----~~~~---v~~~~~~~~~----------------~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 668 DDSYIATCSADKKVKIWDSATGKLVHTYDE----HSEQ---VNCCHFTNKS----------------NHLLLATGSNDFF 724 (1249)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEEC----CSSC---EEEEEECSSS----------------SCCEEEEEETTSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEcC----CCCc---EEEEEEecCC----------------CceEEEEEeCCCe
Confidence 345689999999999999999876555442 3333 4457777743 2368999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
|++||+.+++ .+..+.+|...|++++| ++++++|++++.||+|++||+.+++....+..
T Consensus 725 v~vwd~~~~~--------------~~~~~~~h~~~v~~~~~-------sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 783 (1249)
T 3sfz_A 725 LKLWDLNQKE--------------CRNTMFGHTNSVNHCRF-------SPDDELLASCSADGTLRLWDVRSANERKSINV 783 (1249)
T ss_dssp EEEEETTSSS--------------EEEEECCCSSCEEEEEE-------CSSTTEEEEEESSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCcc--------------hhheecCCCCCEEEEEE-------ecCCCEEEEEECCCeEEEEeCCCCcccceecc
Confidence 9999999854 55678899999999999 89999999999999999999998766554432
Q ss_pred ccc------------------cc-----------------------ccceeeeeecccceeEEEEeeccCCCCceEEEEE
Q 021036 176 HCV------------------PF-----------------------SLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG 214 (318)
Q Consensus 176 ~~~------------------~~-----------------------~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~ 214 (318)
... .+ .........|...+.+++|+ |++.+++++
T Consensus 784 ~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s-----p~~~~l~~~ 858 (1249)
T 3sfz_A 784 KRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS-----PYDHLAVIA 858 (1249)
T ss_dssp CCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC-----SSTTEEEEE
T ss_pred cccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc-----CCCCEEEEE
Confidence 110 00 00112233677889999999 999999999
Q ss_pred eCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEec
Q 021036 215 KGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH 272 (318)
Q Consensus 215 ~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 272 (318)
+.||.|++| +..++. .+..+.+|...|.+++|+|+|.+|++++.|+.|++||+.
T Consensus 859 ~~dg~v~vw--d~~~~~--~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 859 LSQYCVELW--NIDSRL--KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp CSSSCEEEE--ETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred eCCCeEEEE--EcCCCc--eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 999999999 555665 677888999999999999999999999999999999975
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.5e-26 Score=216.66 Aligned_cols=237 Identities=14% Similarity=0.084 Sum_probs=167.1
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+...+++|+.|++|++|+..+.+..... .+... +.+++|+| + ++|++++.|++
T Consensus 28 dg~~lAsgs~Dg~I~lw~~~~~~~~~~~-----~~~~~---V~~l~fsp-g------------------~~L~S~s~D~~ 80 (902)
T 2oaj_A 28 TQNLLAIATVTGEVHIYGQQQVEVVIKL-----EDRSA---IKEMRFVK-G------------------IYLVVINAKDT 80 (902)
T ss_dssp TTTEEEEEETTSEEEEECSTTCEEEEEC-----SSCCC---EEEEEEET-T------------------TEEEEEETTCE
T ss_pred CCCEEEEEeCCCEEEEEeCCCcEEEEEc-----CCCCC---EEEEEEcC-C------------------CEEEEEECcCe
Confidence 3456899999999999998765432111 12222 44577777 6 79999999999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
|++||+++++ .+..+. |...|++++| ++++++|++|+.||+|++||+++++.. .+..
T Consensus 81 v~lWd~~~~~--------------~~~~~~-~~~~V~~v~~-------sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i 137 (902)
T 2oaj_A 81 VYVLSLYSQK--------------VLTTVF-VPGKITSIDT-------DASLDWMLIGLQNGSMIVYDIDRDQLS-SFKL 137 (902)
T ss_dssp EEEEETTTCS--------------EEEEEE-CSSCEEEEEC-------CTTCSEEEEEETTSCEEEEETTTTEEE-EEEE
T ss_pred EEEEECCCCc--------------EEEEEc-CCCCEEEEEE-------CCCCCEEEEEcCCCcEEEEECCCCccc-ccee
Confidence 9999999855 344454 6689999999 899999999999999999999987653 1111
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecc-------------
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAH------------- 241 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h------------- 241 (318)
.... ........|..+|.+++|+ |+ +..+++|+.||.| +| |.++++ .+..+..|
T Consensus 138 ~~~~--~~~~~~~~h~~~V~sl~~s-----p~~~~~l~~g~~dg~v-lW--d~~~~~--~~~~~~~~~~~g~~~~~~~~~ 205 (902)
T 2oaj_A 138 DNLQ--KSSFFPAARLSPIVSIQWN-----PRDIGTVLISYEYVTL-TY--SLVENE--IKQSFIYELPPFAPGGDFSEK 205 (902)
T ss_dssp CCHH--HHHTCSSSCCCCCCEEEEE-----TTEEEEEEEECSSCEE-EE--ETTTTE--EEEEECCCBCTTCCCSTTCCC
T ss_pred cccc--ccccccccCCCCeEEEEEc-----cCCCCEEEEEeCCCcE-EE--ECCCCc--eEEEEecccCCcCCCcccccc
Confidence 0000 0001124567799999999 75 5799999999999 99 556665 44455444
Q ss_pred -----cCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee-c-----CCCCCCccccccCCCcceeeeEEEEc---
Q 021036 242 -----DQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS-I-----PTNTPGLQSCTDLPDAFVSCLGMAVS--- 307 (318)
Q Consensus 242 -----~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~-----~~~~~~~~~~~~~~~h~~~v~~v~~s--- 307 (318)
...|++++|+|+|.+|++++.|++|++||+++++..... . +....... .....|...|++++|+
T Consensus 206 ~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~--~~~~~~~~~V~~v~w~~~~ 283 (902)
T 2oaj_A 206 TNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYI--RDSSTNAAKISKVYWMCEN 283 (902)
T ss_dssp TTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCC--CCCSSCCCEEEEEEEEECS
T ss_pred cccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCC--CCCccccCCeeEEEEEecC
Confidence 577999999999999999999999999999887654321 1 11000000 0000255689999995
Q ss_pred -CCC-cEEEEE
Q 021036 308 -PGN-LVVAMV 316 (318)
Q Consensus 308 -p~~-~~l~~~ 316 (318)
|++ .+|++|
T Consensus 284 ~pd~~~ll~sg 294 (902)
T 2oaj_A 284 NPEYTSLLISH 294 (902)
T ss_dssp STTEEEEEEEE
T ss_pred CCCCCEEEEeC
Confidence 543 567766
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=3.3e-26 Score=193.58 Aligned_cols=207 Identities=14% Similarity=0.109 Sum_probs=157.2
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC--
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-- 145 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-- 145 (318)
+.+|..+|+++++++++++|++|+.||.|++|++.++... .+....+.+|...|.+++| ++
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----------~~~~~~~~~~~~~v~~~~~-------~~~~ 69 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----------WELSDSWRAHDSSIVAIDW-------ASPE 69 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----------EEEEEEEECCSSCEEEEEE-------CCGG
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----------ceecceeccCCCcEEEEEE-------cCCC
Confidence 4567788888888888899999999999999999875421 3466778899999999999 66
Q ss_pred CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC--ceEEEEEeCCCcEEEe
Q 021036 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR--LMLLAVGKGSGSFDLW 223 (318)
Q Consensus 146 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~--~~~l~~~~~dg~i~vw 223 (318)
++++|++++.||.|++||++.++........ . .......|...|.+++|+ |+ +.+|++++.||.|++|
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~----~-~~~~~~~~~~~v~~~~~~-----~~~~~~~l~~~~~dg~v~iw 139 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRW----N-KLCTLNDSKGSLYSVKFA-----PAHLGLKLACLGNDGILRLY 139 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSE----E-EEEEECCCSSCEEEEEEC-----CGGGCSEEEEEETTCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCc----c-eeeeecccCCceeEEEEc-----CCCCCcEEEEecCCCcEEEe
Confidence 5899999999999999999876421100000 0 001123456689999999 88 9999999999999999
Q ss_pred eeccCCCeeeEeeee-------------ecccCceeEEEEcCC---CCEEEEecCCCcEEEEEecCCceeeeecCCCCCC
Q 021036 224 KCDISCNKFDKVGSY-------------NAHDQVVTGLAWAFD---GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPG 287 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~-------------~~h~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 287 (318)
|+ ++.+ .+..+ ..|...+.+++|+|+ +.++++++.|+.+.+|+...+....+.
T Consensus 140 d~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------- 208 (351)
T 3f3f_A 140 DA--LEPS--DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA------- 208 (351)
T ss_dssp EC--SSTT--CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE-------
T ss_pred cC--CChH--HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee-------
Confidence 54 3332 11111 257788999999997 889999999999988887766543222
Q ss_pred ccccccCCCcceeeeEEEEcCCC----cEEEEEe
Q 021036 288 LQSCTDLPDAFVSCLGMAVSPGN----LVVAMVQ 317 (318)
Q Consensus 288 ~~~~~~~~~h~~~v~~v~~sp~~----~~l~~~~ 317 (318)
.+.+|...|.+++|+|++ ++|++|.
T Consensus 209 -----~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 209 -----KLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp -----ECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred -----ecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 233466799999999998 8898874
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=3e-26 Score=200.97 Aligned_cols=246 Identities=14% Similarity=0.268 Sum_probs=183.3
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhcc-----ccccc-----cceeeeecccc-----cCCCCcccccccCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYAS-----RSAML-----HSLAVAWSPVL-----RLSSKKYPVPQNGS 80 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~w~p~~-----~~~~~~~~v~~~~~ 80 (318)
+...+++|+.|++|++||+.+++....+..+.... .+..+ ......|+... .+..|..+|.++.+
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 221 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF 221 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 57789999999999999999887766655432111 11111 11234565432 25578889999999
Q ss_pred CCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEE
Q 021036 81 SNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVR 160 (318)
Q Consensus 81 s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~ 160 (318)
++ +++++|+.||.|++||+.+++. ......+.+|...|.+++| ++++|++|+.||.|+
T Consensus 222 ~~--~~l~s~s~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~~v~~~~~---------~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 222 NN--GMMVTCSKDRSIAVWDMASPTD-----------ITLRRVLVGHRAAVNVVDF---------DDKYIVSASGDRTIK 279 (435)
T ss_dssp CT--TEEEEEETTSCEEEEECSSSSC-----------CEEEEEECCCSSCEEEEEE---------ETTEEEEEETTSEEE
T ss_pred cC--CEEEEeeCCCcEEEEeCCCCCC-----------ceeeeEecCCCCcEEEEEe---------CCCEEEEEeCCCeEE
Confidence 74 6999999999999999988653 2234667899999999998 467899999999999
Q ss_pred EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec
Q 021036 161 IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 161 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
+||+++++.+..+..+. ..|.++.++ +.++++|+.||.|++| |.++++ .+..+.+
T Consensus 280 vwd~~~~~~~~~~~~~~--------------~~v~~~~~~-------~~~l~~g~~dg~i~iw--d~~~~~--~~~~~~~ 334 (435)
T 1p22_A 280 VWNTSTCEFVRTLNGHK--------------RGIACLQYR-------DRLVVSGSSDNTIRLW--DIECGA--CLRVLEG 334 (435)
T ss_dssp EEETTTCCEEEEEECCS--------------SCEEEEEEE-------TTEEEEEETTSCEEEE--ETTTCC--EEEEECC
T ss_pred EEECCcCcEEEEEcCCC--------------CcEEEEEeC-------CCEEEEEeCCCeEEEE--ECCCCC--EEEEEeC
Confidence 99999998887766544 378888775 5799999999999999 566665 6778889
Q ss_pred ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 241 HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 241 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
|...|.+++| ++.+|++|+.||.|++||+.++........ ......+.+|.+.|.+++| ++.+|++|.
T Consensus 335 h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~l~~--~~~~l~s~s 402 (435)
T 1p22_A 335 HEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAG-----TLCLRTLVEHSGRVFRLQF--DEFQIVSSS 402 (435)
T ss_dssp CSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTT-----TTEEEEECCCSSCCCCEEE--CSSCEEECC
T ss_pred CcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccccc-----chheeeccCCCCCeEEEEe--CCCEEEEEe
Confidence 9999999998 688999999999999999976431100000 0011233457779999999 677787763
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=192.84 Aligned_cols=217 Identities=18% Similarity=0.195 Sum_probs=160.3
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhcc-----cccccc-----ceeeeeccc------ccCCCCcccccccC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYAS-----RSAMLH-----SLAVAWSPV------LRLSSKKYPVPQNG 79 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~w~p~------~~~~~~~~~v~~~~ 79 (318)
+...+++|+.|++|++||+++++++..+..+.... .+..+. .....|... ..+.+|...+..+.
T Consensus 78 ~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T 4ggc_A 78 EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 157 (318)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEE
Confidence 34568999999999999999988766654322110 000000 001112111 12456888899999
Q ss_pred CCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC-cE--EEEEeCC
Q 021036 80 SSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ-VL--LVTGSSD 156 (318)
Q Consensus 80 ~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~-~~--l~s~~~d 156 (318)
+++++++|++++.||.|++||+.+++.. .........|...|.++.+ .+.+ .. +++++.+
T Consensus 158 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~----------~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 158 WAPDGRHLASGGNDNLVNVWPSAPGEGG----------WVPLQTFTQHQGAVKAVAW-------CPWQSNVLATGGGTSD 220 (318)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCBTTB----------SCCSEEECCCCSCEEEEEE-------CTTSTTEEEEEECTTT
T ss_pred EcCCCCEEEEEecCcceeEEECCCCccc----------ccceeeecccCCceEEEEe-------cCCCCcEEEEEecCCC
Confidence 9999999999999999999999876532 2234455678889999999 4443 33 3466788
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe--CCCcEEEeeeccCCCeeeE
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK--GSGSFDLWKCDISCNKFDK 234 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~ 234 (318)
++|++||........... +...+..+.++ +++..+++++ .|+.|++| |.++++ +
T Consensus 221 ~~i~lwd~~~~~~~~~~~---------------~~~~v~~~~~~-----~~~~~~~~~sg~~d~~i~iw--d~~~~~--~ 276 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVD---------------AHSQVCSILWS-----PHYKELISGHGFAQNQLVIW--KYPTMA--K 276 (318)
T ss_dssp CEEEEEETTTCCEEEEEE---------------CSSCEEEEEEE-----TTTTEEEEEECTTTCCEEEE--ETTTCC--E
T ss_pred CEEEEEeccccccccccc---------------ceeeeeeeeec-----ccccceEEEEEcCCCEEEEE--ECCCCc--E
Confidence 999999998876655433 23378889998 7777766654 79999999 566666 7
Q ss_pred eeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 021036 235 VGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHG 273 (318)
Q Consensus 235 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 273 (318)
+.++.+|.+.|++++|+|+|++|++|+.||+|+|||+..
T Consensus 277 ~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 277 VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 888999999999999999999999999999999999864
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=7.9e-26 Score=198.25 Aligned_cols=185 Identities=16% Similarity=0.215 Sum_probs=150.5
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 147 (318)
+.+|..+|.++.+ ++++|++|+.||.|++||+.+++ .+..+.+|...|.+++| + +
T Consensus 169 ~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~l~~-------~--~ 223 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--------------MLNTLIHHCEAVLHLRF-------N--N 223 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--------------EEEEECCCCSCEEEEEC-------C--T
T ss_pred EcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--------------EEEEEcCCCCcEEEEEE-------c--C
Confidence 5678899999998 67899999999999999999854 56778899999999999 4 3
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
.+|++|+.||.|++||+.+++..... .....|...|.++++. ++++++|+.||.|++| |.
T Consensus 224 ~~l~s~s~dg~i~vwd~~~~~~~~~~-----------~~~~~~~~~v~~~~~~-------~~~l~s~~~dg~i~vw--d~ 283 (435)
T 1p22_A 224 GMMVTCSKDRSIAVWDMASPTDITLR-----------RVLVGHRAAVNVVDFD-------DKYIVSASGDRTIKVW--NT 283 (435)
T ss_dssp TEEEEEETTSCEEEEECSSSSCCEEE-----------EEECCCSSCEEEEEEE-------TTEEEEEETTSEEEEE--ET
T ss_pred CEEEEeeCCCcEEEEeCCCCCCceee-----------eEecCCCCcEEEEEeC-------CCEEEEEeCCCeEEEE--EC
Confidence 58999999999999999987654211 1123455588888875 6799999999999999 56
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS 307 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 307 (318)
++++ .+..+.+|...|.++.|+ +.++++|+.||.|++||++++.... .+.+|...|.+++|
T Consensus 284 ~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~--------------~~~~h~~~v~~~~~- 344 (435)
T 1p22_A 284 STCE--FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR--------------VLEGHEELVRCIRF- 344 (435)
T ss_dssp TTCC--EEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEE--------------EECCCSSCEEEEEC-
T ss_pred CcCc--EEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEE--------------EEeCCcCcEEEEEe-
Confidence 6665 677888999999999984 6799999999999999999876543 22335568999999
Q ss_pred CCCcEEEEEe
Q 021036 308 PGNLVVAMVQ 317 (318)
Q Consensus 308 p~~~~l~~~~ 317 (318)
++.+|++|.
T Consensus 345 -~~~~l~sg~ 353 (435)
T 1p22_A 345 -DNKRIVSGA 353 (435)
T ss_dssp -CSSEEEEEE
T ss_pred -cCCEEEEEe
Confidence 788888874
No 105
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.3e-26 Score=196.31 Aligned_cols=201 Identities=19% Similarity=0.261 Sum_probs=164.7
Q ss_pred CcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEE
Q 021036 71 KKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLL 150 (318)
Q Consensus 71 ~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l 150 (318)
|..+|.++++++++++|++|+.||.|++|+. + .+.+..+..|...|.+++| ++++++|
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~--------------~~~~~~~~~~~~~v~~~~~-------~~~~~~l 164 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK-T--------------GALLNVLNFHRAPIVSVKW-------NKDGTHI 164 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET-T--------------SCEEEEECCCCSCEEEEEE-------CTTSSEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-C--------------CCeeeeccCCCccEEEEEE-------CCCCCEE
Confidence 5779999999999999999999999999994 3 3466778899999999999 8999999
Q ss_pred EEEeCCCcEEEEECCCcceeeeecccccc---------------cccc---------------------------eeeee
Q 021036 151 VTGSSDGSVRIWDGYIQELQKSAEAHCVP---------------FSLL---------------------------KEVVT 188 (318)
Q Consensus 151 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~---------------~~~~---------------------------~~~~~ 188 (318)
++++.|+.|++||+.+++....+..+... ...+ .....
T Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 244 (425)
T 1r5m_A 165 ISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI 244 (425)
T ss_dssp EEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC
T ss_pred EEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec
Confidence 99999999999999988877766544332 1000 01234
Q ss_pred ecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEE
Q 021036 189 VNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRS 268 (318)
Q Consensus 189 ~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 268 (318)
.|...|.+++|+ |++++|++++.||.|++| +.+..+ .+..+.+|...|.+++|+|++ ++++++.|+.|++
T Consensus 245 ~~~~~i~~~~~~-----~~~~~l~~~~~d~~i~i~--d~~~~~--~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 245 GHHGPISVLEFN-----DTNKLLLSASDDGTLRIW--HGGNGN--SQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRL 314 (425)
T ss_dssp CCSSCEEEEEEE-----TTTTEEEEEETTSCEEEE--CSSSBS--CSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEE
T ss_pred cCCCceEEEEEC-----CCCCEEEEEcCCCEEEEE--ECCCCc--cceEecCCCccEEEEEECCCC-EEEEEeCCCcEEE
Confidence 677899999999 999999999999999999 555554 566777899999999999999 9999999999999
Q ss_pred EEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 269 WIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
||++++....... .|...|.+++|+|++++|+++.
T Consensus 315 ~d~~~~~~~~~~~--------------~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 315 WSLKQNTLLALSI--------------VDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp EETTTTEEEEEEE--------------CTTCCEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEeEecc--------------cCCccEEEEEEcCCCCEEEEEE
Confidence 9998876543221 2345899999999999999874
No 106
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=202.09 Aligned_cols=222 Identities=12% Similarity=0.143 Sum_probs=150.5
Q ss_pred cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecccc------------ccEEEEEeeeecC
Q 021036 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN------------SWITSISLAVLSS 141 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~~~~~p~~~ 141 (318)
+|.+++|++++++||+|+.||.|+||++.+++.... ......+....+.+|. ..|++++|
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~----- 101 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQS---HSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW----- 101 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----C---CCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE-----
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCc---ccccceeEecccccccccccccccccccCceEEEEE-----
Confidence 333444444449999999999999999987542100 0001123567788998 88999999
Q ss_pred CCCCCC--cEEEEEeCCCcEEEEECCCcceeeee---ccccc-----------c------------cccceeeeeecccc
Q 021036 142 DSSNPQ--VLLVTGSSDGSVRIWDGYIQELQKSA---EAHCV-----------P------------FSLLKEVVTVNTVP 193 (318)
Q Consensus 142 ~~~~~~--~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~~~-----------~------------~~~~~~~~~~~~~~ 193 (318)
++++ .+|++++.|++|++||+..++..... ..+.. . ..........|...
T Consensus 102 --~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 102 --LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp --CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred --cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 7777 79999999999999999875432110 00000 0 00011223568889
Q ss_pred eeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee-------eeecccCceeEEEEcCCC-CEEEEecCCCc
Q 021036 194 ISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG-------SYNAHDQVVTGLAWAFDG-CCLYSCSQDNF 265 (318)
Q Consensus 194 v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~ 265 (318)
|.+++|+ |++++|++| .|+.|++||+ +... ..+. .+.+|...|++++|+|++ .+|++++.||.
T Consensus 180 v~~~~~~-----~~~~~l~s~-~d~~i~iwd~--~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 180 INSISIN-----SDYETYLSA-DDLRINLWHL--EITD-RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp CCEEEEC-----TTSSEEEEE-CSSEEEEEET--TEEE-EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred eEEEEEc-----CCCCEEEEe-CCCeEEEEEC--CCCC-ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 9999999 999999999 7999999954 4222 1222 356899999999999998 89999999999
Q ss_pred EEEEEecCCce-----eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 266 VRSWIFHGNSL-----SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 266 v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
|++||++++.. ..+..+.... ....+.+|...|.+++|+|+|++|+++.
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPS---NRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC--------CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred EEEEECcCCccccceeeEeccCCCcc---ccccccccCceEEEEEECCCCCEEEEee
Confidence 99999988664 2222221100 0001123445899999999999999874
No 107
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=8.2e-26 Score=192.35 Aligned_cols=208 Identities=16% Similarity=0.197 Sum_probs=154.1
Q ss_pred CCccceEEeeCCCceeEeecCCCC-CCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC
Q 021036 15 SNTHPTVAASKSKGNSITKIPSNC-CLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS 93 (318)
Q Consensus 15 ~~~~~~~t~s~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d 93 (318)
.+...+++++.|+.+++||+.+++ ....+.......... +.++.|.+ ++++++++|++++.|
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~--------------~~~~~~~~l~~~~~d 189 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD---CWTVAFGN--------------AYNQEERVVCAGYDN 189 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC---EEEEEEEC--------------CCC-CCCEEEEEETT
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc---eEEEEEEe--------------ccCCCCCEEEEEccC
Confidence 345578999999999999999876 333333211111111 22344211 133444999999999
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC---CCcEEEEEeCCCcEEEEECCCccee
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN---PQVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~---~~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
|.|++||+++++ . .....|...|.+++| ++ ++.+|++++.||.|++||+++++..
T Consensus 190 ~~i~i~d~~~~~--------------~-~~~~~~~~~v~~~~~-------~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 190 GDIKLFDLRNMA--------------L-RWETNIKNGVCSLEF-------DRKDISMNKLVATSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp SEEEEEETTTTE--------------E-EEEEECSSCEEEEEE-------SCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred CeEEEEECccCc--------------e-eeecCCCCceEEEEc-------CCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence 999999999854 2 234678899999999 77 8899999999999999999877655
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCC---------------eeeE
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCN---------------KFDK 234 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~---------------~~~~ 234 (318)
..+... ....|...|++++|+ |++. +|++++.||.|++|+++.... ..+.
T Consensus 248 ~~~~~~---------~~~~~~~~v~~~~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 248 KGFASV---------SEKAHKSTVWQVRHL-----PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp TEEEEE---------EEECCSSCEEEEEEE-----TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred cceeee---------ccCCCcCCEEEEEEC-----CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 443311 113566799999999 8988 899999999999997653221 2246
Q ss_pred eeeeecccCceeEEEEcCCCCEEE-EecCCCcEEEEEecCCc
Q 021036 235 VGSYNAHDQVVTGLAWAFDGCCLY-SCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 235 ~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~ 275 (318)
+..+.+|...|++++|+|++++|+ +++.|+.|++||+.+..
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 778889999999999999999888 89999999999997643
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=1.2e-25 Score=194.75 Aligned_cols=218 Identities=14% Similarity=0.138 Sum_probs=153.8
Q ss_pred CcccccccCCCC-CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCc
Q 021036 71 KKYPVPQNGSSN-WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQV 148 (318)
Q Consensus 71 ~~~~v~~~~~s~-~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~ 148 (318)
|..+|.++++++ ++++|++|+.||.|++|++.+++.......... .........+|...|.+++| ++ ++.
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~-------~~~~~~ 113 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV-CSIGRDHPDVHRYSVETVQW-------YPHDTG 113 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEE-EEECTTCTTCCSSCEEEEEE-------CTTCTT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccc-ccccccccccCCCcEEEEEE-------ccCCCc
Confidence 334444444444 459999999999999999998654311000000 00000011359999999999 66 778
Q ss_pred EEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccC
Q 021036 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDIS 228 (318)
Q Consensus 149 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 228 (318)
+|++++.|+.|++||+.+++....+.. ...+.++.+.. ..+++.++++++.+|.|++| +.+
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~---------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~--d~~ 174 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNF---------------EETVYSHHMSP--VSTKHCLVAVGTRGPKVQLC--DLK 174 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEEC---------------SSCEEEEEECS--SCSSCCEEEEEESSSSEEEE--ESS
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccC---------------CCceeeeEeec--CCCCCcEEEEEcCCCeEEEE--eCC
Confidence 999999999999999999877766542 23677888871 01245699999999999999 455
Q ss_pred CCeeeEeeeeecccCceeEEEEcCCCC-EEEEecCCCcEEEEEecCCcee--eeecCCCCCCccccccCCCcceeeeEEE
Q 021036 229 CNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLS--QVSIPTNTPGLQSCTDLPDAFVSCLGMA 305 (318)
Q Consensus 229 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 305 (318)
+++ .+..+.+|...|.+++|+|++. +|++++.||.|++||++.+... .+..+..............|...|.+++
T Consensus 175 ~~~--~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 175 SGS--CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSC--CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred Ccc--eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 555 5667888999999999999998 5899999999999999875422 2211111111112223457889999999
Q ss_pred EcCCCcEEEEEe
Q 021036 306 VSPGNLVVAMVQ 317 (318)
Q Consensus 306 ~sp~~~~l~~~~ 317 (318)
|+|++++|+++.
T Consensus 253 ~~~~~~~l~~~~ 264 (408)
T 4a11_B 253 FTSDGLHLLTVG 264 (408)
T ss_dssp ECTTSSEEEEEE
T ss_pred EcCCCCEEEEec
Confidence 999999999874
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=1.4e-25 Score=204.50 Aligned_cols=224 Identities=15% Similarity=0.075 Sum_probs=169.0
Q ss_pred ceEEeeCCCceeEeecCCC----CCCCceecchhccccccccceeeeecccccCCCCccc-ccccCCCC--CccEEEEec
Q 021036 19 PTVAASKSKGNSITKIPSN----CCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYP-VPQNGSSN--WFSILAVGG 91 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~-v~~~~~s~--~~~~l~~g~ 91 (318)
.+++++ ++.+++||+.++ +....+ .+|..+ |.+++++| ++++|++|+
T Consensus 32 ~l~~~~-~~~v~v~~~~~~~~~~~~~~~~-------------------------~~h~~~~v~~~~~sp~~~~~~l~s~~ 85 (615)
T 1pgu_A 32 AIAYPC-GKSAFVRCLDDGDSKVPPVVQF-------------------------TGHGSSVVTTVKFSPIKGSQYLCSGD 85 (615)
T ss_dssp EEEEEE-TTEEEEEECCSSCCSSCSEEEE-------------------------CTTTTSCEEEEEECSSTTCCEEEEEE
T ss_pred EEEEec-CCeEEEEECCCCCCccccceEE-------------------------ecCCCceEEEEEECcCCCCCEEEEec
Confidence 355555 889999999876 332222 223333 44444444 459999999
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC----CcEEEEECCCc
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD----GSVRIWDGYIQ 167 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~ 167 (318)
.||.|++|++.++.... ....+....+..|...|.+++| ++++++|++++.+ +.|++|| .+
T Consensus 86 ~dg~v~vw~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~~~~~~~~v~~~d--~~ 150 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESN------SVEVNVKSEFQVLAGPISDISW-------DFEGRRLCVVGEGRDNFGVFISWD--SG 150 (615)
T ss_dssp TTSEEEEEEEEEEGGGT------EEEEEEEEEEECCSSCEEEEEE-------CTTSSEEEEEECCSSCSEEEEETT--TC
T ss_pred CCCEEEEEeCCCCcccc------cccccccchhhcccccEEEEEE-------eCCCCEEEEeccCCCCccEEEEEE--CC
Confidence 99999999997541000 0003566778889999999999 8999999999988 6888888 45
Q ss_pred ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCeeeEeeeeecccC---
Q 021036 168 ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ--- 243 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~--- 243 (318)
+....+.. |...|.+++|+ |++. ++++++.|+.|++| +....+ .+..+.+|..
T Consensus 151 ~~~~~~~~--------------~~~~v~~~~~~-----~~~~~~l~~~~~d~~v~vw--d~~~~~--~~~~~~~~~~~~~ 207 (615)
T 1pgu_A 151 NSLGEVSG--------------HSQRINACHLK-----QSRPMRSMTVGDDGSVVFY--QGPPFK--FSASDRTHHKQGS 207 (615)
T ss_dssp CEEEECCS--------------CSSCEEEEEEC-----SSSSCEEEEEETTTEEEEE--ETTTBE--EEEEECSSSCTTC
T ss_pred Ccceeeec--------------CCccEEEEEEC-----CCCCcEEEEEeCCCcEEEE--eCCCcc--eeeeecccCCCCc
Confidence 55555544 34489999999 8887 89999999999999 555655 6777888998
Q ss_pred ceeEEEEcCC-CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 244 VVTGLAWAFD-GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 244 ~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.|.+++|+|+ +++|++++.|+.|++||+.+++........ ...|...|.+++|+ ++++|+++.
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----------~~~~~~~v~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD----------QEPVQGGIFALSWL-DSQKFATVG 271 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT----------TBCCCSCEEEEEES-SSSEEEEEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccc----------ccccCCceEEEEEc-CCCEEEEEc
Confidence 9999999999 999999999999999999887655432110 00355699999999 999999874
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6e-26 Score=192.82 Aligned_cols=198 Identities=8% Similarity=-0.020 Sum_probs=138.9
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCC--CccEEEEecCCCcEE
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSN--WFSILAVGGRSGKVS 97 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~--~~~~l~~g~~dg~i~ 97 (318)
+++++.|+++++|+.........+.. ... +. .....|..+|.++++++ ++++|++|+.||.|+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~------~~~-----~~----~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKT------NKV-----LR----EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTT------CCE-----EE----EEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCC------cce-----eE----EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 89999999999998764211000000 000 00 00112334556666666 669999999999999
Q ss_pred EEEccCCccccccccccCCceeEEeee-ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCccee-eeecc
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLF-QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQ-KSAEA 175 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~ 175 (318)
+||+++++ ..... ..|...|.+++| ++++.+|++|+.||.|++||+++++.. ..+..
T Consensus 153 ~wd~~~~~--------------~~~~~~~~~~~~i~~~~~-------~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 153 FQSYEDDS--------------QYIVHSAKSDVEYSSGVL-------HKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp EEESSSSC--------------EEEEECCCSSCCCCEEEE-------CTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred EEECCCCc--------------EEEEEecCCCCceEEEEE-------CCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 99999865 23333 345668999999 899999999999999999999998766 55543
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCee-eEeeeeecccCcee--EEEEcC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKF-DKVGSYNAHDQVVT--GLAWAF 252 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~~h~~~v~--~~~~~~ 252 (318)
.|..+|++++|+ |++.+|++++ ++.|++|| ++..+. ..+..+..|...+. +++|+|
T Consensus 212 -------------~h~~~v~~l~fs-----~~g~~l~s~~-~~~v~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 212 -------------DEEAKIKEVKFA-----DNGYWMVVEC-DQTVVCFD--LRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp -------------CTTSCEEEEEEC-----TTSSEEEEEE-SSBEEEEE--TTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred -------------cCCCCEEEEEEe-----CCCCEEEEEe-CCeEEEEE--cCCCCcceeecccccccccccceEEEECC
Confidence 144589999999 9999999999 55999995 444431 11222223444444 699999
Q ss_pred CCCEEEEecC-CCcEEEEEecCC
Q 021036 253 DGCCLYSCSQ-DNFVRSWIFHGN 274 (318)
Q Consensus 253 ~~~~l~s~~~-d~~v~iwd~~~~ 274 (318)
+|++|++++. |+.|++|++...
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEecCCCCcEEEEEEccc
Confidence 9999999988 999999999653
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-25 Score=198.21 Aligned_cols=230 Identities=11% Similarity=0.057 Sum_probs=167.6
Q ss_pred CcCCCCCccceEEeeCCCceeEeecC--CCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEE
Q 021036 10 NKMKDSNTHPTVAASKSKGNSITKIP--SNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSIL 87 (318)
Q Consensus 10 ~~~~~~~~~~~~t~s~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l 87 (318)
..+.+.+...+++++.|+.+++||+. +++++..+.... +... +.+++|+|++ ++|
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~---v~~~~~sp~~------------------~~l 164 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC--FSKR---PNAISIAEDD------------------TTV 164 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE--CSSC---EEEEEECTTS------------------SEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc--CCCC---ceEEEEcCCC------------------CEE
Confidence 34444444445899999999999998 777655554211 2222 4457777777 999
Q ss_pred EEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC---CcEEEEEeCCCcEEEEEC
Q 021036 88 AVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP---QVLLVTGSSDGSVRIWDG 164 (318)
Q Consensus 88 ~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~---~~~l~s~~~d~~v~iwd~ 164 (318)
++|+.||.|++|++.+++.. ......+.+|...|++++| +++ +++|++|+.|++|++||+
T Consensus 165 ~~~~~~g~v~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~~-------sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 165 IIADKFGDVYSIDINSIPEE----------KFTQEPILGHVSMLTDVHL-------IKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp EEEETTSEEEEEETTSCCCS----------SCCCCCSEECSSCEEEEEE-------EECTTSCEEEEEEETTSCEEEEEE
T ss_pred EEEeCCCcEEEEecCCcccc----------cccceeeecccCceEEEEE-------cCCCCCCcEEEEEcCCCcEEEEEC
Confidence 99999999999999876531 0033467789999999999 777 889999999999999999
Q ss_pred CCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec----
Q 021036 165 YIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA---- 240 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---- 240 (318)
.+++....+. ..|...|.+++|+ ++.+|++++.|+.|++| |.++++ .+..+..
T Consensus 228 ~~~~~~~~~~-------------~~h~~~v~~~~~s------d~~~l~s~~~d~~v~vw--d~~~~~--~~~~~~~~~~~ 284 (450)
T 2vdu_B 228 PQCFIVDKWL-------------FGHKHFVSSICCG------KDYLLLSAGGDDKIFAW--DWKTGK--NLSTFDYNSLI 284 (450)
T ss_dssp SCTTCEEEEC-------------CCCSSCEEEEEEC------STTEEEEEESSSEEEEE--ETTTCC--EEEEEECHHHH
T ss_pred CCCceeeeee-------------cCCCCceEEEEEC------CCCEEEEEeCCCeEEEE--ECCCCc--Eeeeecchhhh
Confidence 9887665522 2345589999994 78899999999999999 555655 3444432
Q ss_pred ---------------------ccCceeEEEEcCCCCEEEEec-CCCcEEEEEe--cCC-ceeeeecCCCCCCccccccCC
Q 021036 241 ---------------------HDQVVTGLAWAFDGCCLYSCS-QDNFVRSWIF--HGN-SLSQVSIPTNTPGLQSCTDLP 295 (318)
Q Consensus 241 ---------------------h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~--~~~-~~~~~~~~~~~~~~~~~~~~~ 295 (318)
....|.+++|+|++++|++++ .|+.|++|++ ..+ .+..+. .+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~------------~~~ 352 (450)
T 2vdu_B 285 KPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQ------------IIT 352 (450)
T ss_dssp GGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEE------------EEE
T ss_pred hhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeecc------------Eec
Confidence 235689999999999999988 8999999999 443 111111 111
Q ss_pred CcceeeeEEEEcCCCcEEEE
Q 021036 296 DAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 296 ~h~~~v~~v~~sp~~~~l~~ 315 (318)
.| ..|.+++|+|++.++++
T Consensus 353 ~~-~~v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 353 FP-YNVISLSAHNDEFQVTL 371 (450)
T ss_dssp CS-SCEEEEEEETTEEEEEE
T ss_pred cC-CceEEEEecCCcEEEEE
Confidence 12 37899999996544443
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=8.1e-26 Score=212.87 Aligned_cols=194 Identities=16% Similarity=0.160 Sum_probs=160.0
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 147 (318)
+.+|...|.+++++|++++|++|+.||.|+|||+.++ +.+..+.+|..+|.+++| ++++
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------------~~~~~~~~~~~~v~~~~~-------s~~~ 67 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------------VEVRSIQVTETPVRAGKF-------IARK 67 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------------EEEEEEECCSSCEEEEEE-------EGGG
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------------ceEEEEecCCCcEEEEEE-------eCCC
Confidence 3445566666666666699999999999999999884 466788899999999999 8999
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
++|++++.||.|++||+.+++....+..|. ..|.+++|+ |++.+|++++.||.|++|+++
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--------------~~v~~~~~s-----~~~~~l~~~~~dg~i~vw~~~- 127 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHP--------------DYIRSIAVH-----PTKPYVLSGSDDLTVKLWNWE- 127 (814)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCS--------------SCEEEEEEC-----SSSSEEEEEETTSEEEEEEGG-
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEecCC--------------CCEEEEEEe-----CCCCEEEEEcCCCEEEEEECC-
Confidence 999999999999999999998777765444 489999999 999999999999999999654
Q ss_pred CCCeeeEeeeeecccCceeEEEEcC-CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEE
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAF-DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAV 306 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 306 (318)
++. .....+.+|...|.+++|+| ++..|++++.||.|++||+.++......... +...+..++|
T Consensus 128 -~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-------------~~~~v~~~~~ 192 (814)
T 3mkq_A 128 -NNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG-------------QERGVNYVDY 192 (814)
T ss_dssp -GTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC-------------CTTCCCEEEE
T ss_pred -CCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC-------------CCCCEEEEEE
Confidence 431 25667788999999999999 7889999999999999999775543322221 2247899999
Q ss_pred cC--CCcEEEEEe
Q 021036 307 SP--GNLVVAMVQ 317 (318)
Q Consensus 307 sp--~~~~l~~~~ 317 (318)
+| ++.+|+++.
T Consensus 193 ~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 193 YPLPDKPYMITAS 205 (814)
T ss_dssp CCSTTCCEEEEEC
T ss_pred EECCCCCEEEEEe
Confidence 99 999999874
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=2.1e-25 Score=195.22 Aligned_cols=209 Identities=16% Similarity=0.162 Sum_probs=153.9
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCC-CccEEEEe
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSN-WFSILAVG 90 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~-~~~~l~~g 90 (318)
+.+.+...+++|+.|+.|++||+.++........ +...+..|...|.++++++ ++.+|+++
T Consensus 189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------------------~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVID------------------AKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp ECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEE------------------CSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred eCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceec------------------cceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 3444445789999999999999987543211100 0011222333444444444 35899999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc-EEEEEeCCCcEEEEECCCc-c
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV-LLVTGSSDGSVRIWDGYIQ-E 168 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~-~ 168 (318)
+.||.|++||++++.. .+.+..+..|...|++++| ++++. +|++|+.||.|++||+++. +
T Consensus 251 ~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~~v~~i~~-------~p~~~~~l~tg~~dg~v~vwd~~~~~~ 312 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNT-----------SKPSHTVDAHTAEVNCLSF-------NPYSEFILATGSADKTVALWDLRNLKL 312 (430)
T ss_dssp ETTSEEEEEETTCSCS-----------SSCSEEEECCSSCEEEEEE-------CSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred eCCCeEEEEECCCCCC-----------CcceeEeecCCCCeEEEEe-------CCCCCCEEEEEeCCCeEEEEeCCCCCC
Confidence 9999999999987531 1344566789999999999 77776 7999999999999999974 4
Q ss_pred eeeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCC----------eeeEeee
Q 021036 169 LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCN----------KFDKVGS 237 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~----------~~~~~~~ 237 (318)
.+..+.. |...|.+++|+ |++ .+|++++.||.|++|++..... ....+..
T Consensus 313 ~~~~~~~--------------h~~~v~~i~~s-----p~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 313 KLHSFES--------------HKDEIFQVQWS-----PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 373 (430)
T ss_dssp CSEEEEC--------------CSSCEEEEEEC-----SSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE
T ss_pred CeEEeec--------------CCCCEEEEEEC-----CCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEE
Confidence 4444443 45589999999 887 5799999999999997654221 0135667
Q ss_pred eecccCceeEEEEcCCCC-EEEEecCCCcEEEEEecCCc
Q 021036 238 YNAHDQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 238 ~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~ 275 (318)
+.+|...|++++|+|++. +|++++.||.|++|++....
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred cCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 778999999999999999 89999999999999997543
No 114
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.1e-24 Score=185.89 Aligned_cols=241 Identities=15% Similarity=0.110 Sum_probs=145.5
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEE-EEecCCCcE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSIL-AVGGRSGKV 96 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l-~~g~~dg~i 96 (318)
..+++|+ +..+++||+.+++....... . .+..+.|.+.. +++ ++|+.|+.|
T Consensus 32 ~~la~g~-~~~~~iw~~~~~~~~~~~~~-----~----~~~~~~~~~~~------------------~~~~~~~~~d~~v 83 (355)
T 3vu4_A 32 SCLILST-LKSFEIYNVHPVAHIMSQEM-----R----HLSKVRMLHRT------------------NYVAFVTGVKEVV 83 (355)
T ss_dssp SEEEEEC-SSEEEEEEETTEEEEEEEEC-----S----CCCEEEECTTS------------------SEEEEECSSTTEE
T ss_pred CEEEEEc-CCEEEEEecCCcceeeeeec-----C----CeEEEEEcCCC------------------CEEEEEECCccEE
Confidence 3445555 45689999886554322211 1 12336666665 555 678888999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC-----------------------------
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ----------------------------- 147 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~----------------------------- 147 (318)
++||..+++ .+..+. +...|.++.+ +++.
T Consensus 84 ~iWd~~~~~--------------~~~~~~-~~~~v~~v~~-------~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 141 (355)
T 3vu4_A 84 HIWDDVKKQ--------------DVSRIK-VDAPVKDLFL-------SREFIVVSYGDVISVFKFGNPWKRITDDIRFGG 141 (355)
T ss_dssp EEEETTTTE--------------EEEEEE-CSSCEEEEEE-------CSSEEEEEETTEEEEEESSTTCCBSSCCEEEEE
T ss_pred EEEECCCCc--------------EEEEEE-CCCceEEEEE-------cCCEEEEEEcCEEEEEECCCCceeeEEeccCCc
Confidence 999998864 334443 4557777777 3332
Q ss_pred ------cEEEE--EeCCCcEEEEECCCcceeeeecccc--cccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC
Q 021036 148 ------VLLVT--GSSDGSVRIWDGYIQELQKSAEAHC--VPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS 217 (318)
Q Consensus 148 ------~~l~s--~~~d~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d 217 (318)
.+++. |+.||.|++||+.+++......... ....+.......|..+|++++|+ |++.+|++|+.|
T Consensus 142 ~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s-----~~g~~l~s~s~d 216 (355)
T 3vu4_A 142 VCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN-----RKSDMVATCSQD 216 (355)
T ss_dssp EEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC-----TTSSEEEEEETT
T ss_pred eEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC-----CCCCEEEEEeCC
Confidence 12222 2344455555544332110000000 00000013345678899999999 999999999999
Q ss_pred Cc-EEEeeeccCCCeeeEeeeee-c-ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCC---CCCcc--
Q 021036 218 GS-FDLWKCDISCNKFDKVGSYN-A-HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTN---TPGLQ-- 289 (318)
Q Consensus 218 g~-i~vw~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~~-- 289 (318)
++ |++| |.++++ .+..+. + |...|++++|+|+|++|++++.|++|++||+............. ...+.
T Consensus 217 ~~~v~iw--d~~~~~--~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (355)
T 3vu4_A 217 GTIIRVF--KTEDGV--LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSE 292 (355)
T ss_dssp CSEEEEE--ETTTCC--EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCS
T ss_pred CCEEEEE--ECCCCc--EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccc
Confidence 98 9999 566666 667777 5 99999999999999999999999999999997643221110000 00000
Q ss_pred ---ccccC-CCcceeeeEEEEcCCCcEEEEEe
Q 021036 290 ---SCTDL-PDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 290 ---~~~~~-~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
....+ ..+......++|+||+++|+++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 293 WSLCNFKLSVDKHVRGCKIAWISESSLVVVWP 324 (355)
T ss_dssp SCSEEEECCCCTTCCCCEEEESSSSEEEEEET
T ss_pred cceeEEEeccCCCCCceEEEEeCCCCEEEEEe
Confidence 00001 11223346799999999998873
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=6e-25 Score=193.15 Aligned_cols=208 Identities=16% Similarity=0.232 Sum_probs=162.7
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++|+.|++|++||+.+++.+..+.. |... +.++.|+ + ++|++|+.||.|
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~----h~~~---v~~~~~~--~------------------~~l~s~~~dg~i 181 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG----HTGG---VWSSQMR--D------------------NIIISGSTDRTL 181 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCC----CSSC---EEEEEEE--T------------------TEEEEEETTSCE
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcC----CCCC---EEEEEec--C------------------CEEEEEeCCCeE
Confidence 45689999999999999998876444332 3332 3335554 2 799999999999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
++||+.++ +.+..+.+|...|.++.| + ++.|++|+.||+|++||+.+++....+..+
T Consensus 182 ~vwd~~~~--------------~~~~~~~~h~~~v~~~~~-------~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 182 KVWNAETG--------------ECIHTLYGHTSTVRCMHL-------H--EKRVVSGSRDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEETTTT--------------EEEEEECCCSSCEEEEEE-------E--TTEEEEEETTSEEEEEESSSCCEEEEEECC
T ss_pred EEEECCcC--------------cEEEEECCCCCcEEEEEe-------c--CCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 99999984 466788899999999999 3 467999999999999999998877766544
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCE
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCC 256 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 256 (318)
. ..+.++++. +..+++|+.||.|++| +.++++ .+..+.+|...|.+++| ++.+
T Consensus 239 ~--------------~~v~~~~~~-------~~~l~~~~~dg~i~iw--d~~~~~--~~~~~~~~~~~v~~~~~--~~~~ 291 (445)
T 2ovr_B 239 V--------------AAVRCVQYD-------GRRVVSGAYDFMVKVW--DPETET--CLHTLQGHTNRVYSLQF--DGIH 291 (445)
T ss_dssp S--------------SCEEEEEEC-------SSCEEEEETTSCEEEE--EGGGTE--EEEEECCCSSCEEEEEE--CSSE
T ss_pred c--------------ccEEEEEEC-------CCEEEEEcCCCEEEEE--ECCCCc--EeEEecCCCCceEEEEE--CCCE
Confidence 4 478887773 6789999999999999 555655 67788899999999999 7889
Q ss_pred EEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 257 LYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 257 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+++++.|+.|++||++++...... .+|...+.+++++ +.++++|.
T Consensus 292 l~~~~~d~~i~i~d~~~~~~~~~~--------------~~~~~~v~~~~~~--~~~l~~~~ 336 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNCIHTL--------------TGHQSLTSGMELK--DNILVSGN 336 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEE--------------CCCCSCEEEEEEE--TTEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCEEEEE--------------cCCcccEEEEEEe--CCEEEEEe
Confidence 999999999999999887654321 2244467777664 55777763
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=2.8e-25 Score=183.55 Aligned_cols=205 Identities=8% Similarity=-0.030 Sum_probs=139.7
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccC----CCCcccccccCCCC---CccEEEEe
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRL----SSKKYPVPQNGSSN---WFSILAVG 90 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~----~~~~~~v~~~~~s~---~~~~l~~g 90 (318)
..+++++ .++++|++++++.+... ..+|... +..++++|+++. ..|...+..++|++ ++.+|++|
T Consensus 128 ~~l~s~g--~~~~v~~l~~g~lv~ss---~~g~d~~---V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 128 QVLLKSG--NIKAVLGLTKRRLVSSS---GTLSDQQ---VEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp EEEEEEE--EEEEEEEETTTEEEEEE---SSSTTCE---EEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEE
T ss_pred cEEEeCC--CeEEEEecCCCcEEEec---ccCCCCc---EEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEe
Confidence 3344444 33777887655432221 1113333 333677776642 35677777778877 67999999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeecccc---ccEEEEEeeeecCCCCCCCcEE------------EEEeC
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN---SWITSISLAVLSSDSSNPQVLL------------VTGSS 155 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~~~~~~~l------------~s~~~ 155 (318)
+.|++|+|||+++++ .++++.+|. ..+.+++| +|+|.++ ++|+.
T Consensus 200 S~D~TIkIWDl~TGk--------------~l~tL~g~~~~v~~v~~vaf-------SpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQ--------------LLKKMHIDDSYQASVCHKAY-------SEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp ETTSEEEEEETTTCC--------------EEEEEECCC---CCCEEEEE-------EETTEEEEEEC------------C
T ss_pred cCCCcEEEEECCCCc--------------EEEEEcCCCcceeeeEEEEE-------CCCCCEEEEeccCCCcceeeccCC
Confidence 999999999999965 556666543 46777889 6777765 66889
Q ss_pred CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe
Q 021036 156 DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 156 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 235 (318)
|++|++||..+++.+..+...- ..+|...+ +..+ .++.++++|+.|++|+|| |..+++ .+
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~---------p~Gh~~~~--lsg~-----~sg~~lASgS~DgTIkIW--Dl~tGk--~l 318 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCL---------PPGQAGRF--LEGD-----VKDHCAAAILTSGTIAIW--DLLLGQ--CT 318 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECC---------CTTCCCCE--EEEE-----EETTEEEEEETTSCEEEE--ETTTCS--EE
T ss_pred CcEEEEEECCCCEEEEEEEeec---------cCCCccee--Eccc-----cCCCEEEEEcCCCcEEEE--ECCCCc--EE
Confidence 9999999999988765442100 01122222 2333 346789999999999999 667776 67
Q ss_pred eeeecccCcee-EEEEcCCCCEEEEecCCCcEEEEEe
Q 021036 236 GSYNAHDQVVT-GLAWAFDGCCLYSCSQDNFVRSWIF 271 (318)
Q Consensus 236 ~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~ 271 (318)
.++.+|...+. .++|+|+|++|++|+.|++|+|||+
T Consensus 319 ~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 319 ALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 78888887655 5899999999999999999999996
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4e-25 Score=193.90 Aligned_cols=230 Identities=13% Similarity=0.139 Sum_probs=161.2
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccc--cccceeeeecccccCCCCcccccccCCCCCccEEEEecCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSA--MLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS 93 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d 93 (318)
+...+++++.||++++||.+. ++..+. +... ...+.+++|+|++ ++||+|+.|
T Consensus 96 dG~~LAs~s~dg~V~iwd~~~--~l~~l~-----~~~~~~~~sv~svafSPDG------------------~~LAsgs~D 150 (588)
T 2j04_A 96 IDDWMAVLSNNGNVSVFKDNK--MLTNLD-----SKGNLSSRTYHCFEWNPIE------------------SSIVVGNED 150 (588)
T ss_dssp SSSCEEEEETTSCEEEEETTE--EEEECC-----CSSCSTTTCEEEEEECSSS------------------SCEEEEETT
T ss_pred CCCEEEEEeCCCcEEEEeCCc--eeeecc-----CCCccccccEEEEEEcCCC------------------CEEEEEcCC
Confidence 445589999999999999544 211111 1110 0123357777776 999999999
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeee----ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLF----QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL 169 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 169 (318)
|+|+||++.++.... ...-.+..+ .+|.+.|.+++| +|+| +++++.|++|++||+.+++.
T Consensus 151 GtVkIWd~~~~~l~~-------~~~i~l~ti~~~~~gh~~~V~sVaw-------SPdg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 151 GELQFFSIRKNSENT-------PEFYFESSIRLSDAGSKDWVTHIVW-------YEDV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp SEEEEEECCCCTTTC-------CCCEEEEEEECSCTTCCCCEEEEEE-------ETTE--EEEEETTCCEEEECCCSSSS
T ss_pred CEEEEEECCCCcccc-------ccceeeeeeecccccccccEEEEEE-------cCCc--EEEEeCCCeEEEEECCCCcc
Confidence 999999999864200 000134554 678899999999 8888 88899999999999987763
Q ss_pred e---eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCcee
Q 021036 170 Q---KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVT 246 (318)
Q Consensus 170 ~---~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~ 246 (318)
. .++. ..|...|.+++|+ +..+|+++ ++.|++| +..+++ ......+|.+.|+
T Consensus 215 ~~~~~tL~-------------~~h~~~V~svaFs-------g~~LASa~-~~tIkLW--d~~~~~--~~~~~~gh~~~V~ 269 (588)
T 2j04_A 215 QPVSRMIQ-------------NASRRKITDLKIV-------DYKVVLTC-PGYVHKI--DLKNYS--ISSLKTGSLENFH 269 (588)
T ss_dssp CCCEEEEE-------------CCCSSCCCCEEEE-------TTEEEEEC-SSEEEEE--ETTTTE--EEEEECSCCSCCC
T ss_pred ccceeeec-------------ccccCcEEEEEEE-------CCEEEEEe-CCeEEEE--ECCCCe--EEEEEcCCCceEE
Confidence 2 2231 1244589999996 47888887 6999999 555665 2122227999999
Q ss_pred EEEE--cCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCcccc-------------ccCCCcceeeeEEEEcCCCc
Q 021036 247 GLAW--AFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSC-------------TDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 247 ~~~~--~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-------------~~~~~h~~~v~~v~~sp~~~ 311 (318)
.++| +|++..++++++||+ ++|.... +...++...+++. .....+...|++++|+|||+
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d~-----~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~ 343 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLEDE-----LHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGY 343 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESSS-----EEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSS
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeecc-----EEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCC
Confidence 9999 999999999999999 9999762 2233333322210 01113366799999999999
Q ss_pred EEEEEe
Q 021036 312 VVAMVQ 317 (318)
Q Consensus 312 ~l~~~~ 317 (318)
.+|++.
T Consensus 344 ~lA~~~ 349 (588)
T 2j04_A 344 SIAIVY 349 (588)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=9.1e-25 Score=186.44 Aligned_cols=204 Identities=15% Similarity=0.147 Sum_probs=145.3
Q ss_pred CCCCcccccccCCCCC---ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCC
Q 021036 68 LSSKKYPVPQNGSSNW---FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS 144 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~---~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 144 (318)
+.+|..+|++++++++ |++|++|+.||.|++|++.+.. ......+.+|...|.+++| +
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~------------~~~~~~~~~h~~~v~~~~~-------~ 95 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG------------QTIPKAQQMHTGPVLDVCW-------S 95 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS------------CEEEEEEEECSSCEEEEEE-------C
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC------------ceeEEEeccccCCEEEEEE-------C
Confidence 4567777777777777 5999999999999999998732 2344678899999999999 8
Q ss_pred CCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEE--eeccCCCCceEEEEEeCCCcEEE
Q 021036 145 NPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSL--ILPVQSPRLMLLAVGKGSGSFDL 222 (318)
Q Consensus 145 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~~~~~~l~~~~~dg~i~v 222 (318)
+++++|++++.||.|++||+.+++.... ..|...|.+++| + +++.+|++++.||.|++
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~---------------~~~~~~v~~~~~~~~-----~~~~~l~~~~~dg~i~v 155 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQI---------------AQHDAPVKTIHWIKA-----PNYSCVMTGSWDKTLKF 155 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEE---------------EECSSCEEEEEEEEC-----SSCEEEEEEETTSEEEE
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCceee---------------ccccCceEEEEEEeC-----CCCCEEEEccCCCcEEE
Confidence 9999999999999999999998875542 235568999999 7 89999999999999999
Q ss_pred eeeccCCCeeeEeeeeeccc-----------------------------------------CceeEEEEcCCCCE----E
Q 021036 223 WKCDISCNKFDKVGSYNAHD-----------------------------------------QVVTGLAWAFDGCC----L 257 (318)
Q Consensus 223 w~~~~~~~~~~~~~~~~~h~-----------------------------------------~~v~~~~~~~~~~~----l 257 (318)
|| .++++ .+..+..+. ..+.++.+.++... +
T Consensus 156 wd--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 156 WD--TRSSN--PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp EC--SSCSS--CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred EE--CCCCc--EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE
Confidence 95 44443 222332221 23344444444333 8
Q ss_pred EEecCCCcEEEEEecCCce----eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 258 YSCSQDNFVRSWIFHGNSL----SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 258 ~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
++++.|+.|++||++.... ..+..+.... ......+|...|.+++|+|++++|+++.
T Consensus 232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~s~~ 292 (368)
T 3mmy_A 232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG---TNTSAPQDIYAVNGIAFHPVHGTLATVG 292 (368)
T ss_dssp EEEETTSEEEEEESSCSCHHHHSEEEECSEEC-------CCCEEECCEEEEEECTTTCCEEEEE
T ss_pred EEecCCCcEEEEecCCCCccccceeeeeeeccc---ccccccccccceEEEEEecCCCEEEEEc
Confidence 8888888888888876422 1222111100 0011233445799999999999999884
No 119
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-24 Score=180.36 Aligned_cols=212 Identities=12% Similarity=0.140 Sum_probs=161.5
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhcccccccc--------------ceeeeecccc---cCCCCccccccc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLH--------------SLAVAWSPVL---RLSSKKYPVPQN 78 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~w~p~~---~~~~~~~~v~~~ 78 (318)
+...+++++.|+.+++|++........+.. -..|...+.. .....|+... .+..|..++.++
T Consensus 70 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 70 EKELLLFGGKDTMINGVPLFATSGEDPLYT-LIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDA 148 (313)
T ss_dssp TTTEEEEEETTSCEEEEETTCCTTSCC-CE-ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEE
T ss_pred CCCEEEEecCCCeEEEEEeeecCCCCcccc-hhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEE
Confidence 456789999999999999876532221111 0112222111 1122333111 144688899999
Q ss_pred CCCC-CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecc-ccccEEEEEeeeecCCCCCCCcEEEEEeCC
Q 021036 79 GSSN-WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA-HNSWITSISLAVLSSDSSNPQVLLVTGSSD 156 (318)
Q Consensus 79 ~~s~-~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d 156 (318)
.+.+ +++++++++.||.|++||.. +....+.. |...|.+++| ++++. |++++.|
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d~~----------------~~~~~~~~~~~~~i~~~~~-------~~~~~-~~~~~~d 204 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQND----------------KVIKTFSGIHNDVVRHLAV-------VDDGH-FISCSND 204 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETT----------------EEEEEECSSCSSCEEEEEE-------EETTE-EEEEETT
T ss_pred EEccCCCCEEEEEECCCCEEEEecC----------------ceEEEEeccCcccEEEEEE-------cCCCe-EEEccCC
Confidence 9888 89999999999999999943 34556666 8999999999 77887 9999999
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
+.|++||+++++....+..+. .+|.+++|+ |++ .|++++.||.|++| +.++++ .+.
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~--------------~~i~~~~~~-----~~~-~l~~~~~dg~v~iw--d~~~~~--~~~ 260 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHE--------------SFVYCIKLL-----PNG-DIVSCGEDRTVRIW--SKENGS--LKQ 260 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCS--------------SCEEEEEEC-----TTS-CEEEEETTSEEEEE--CTTTCC--EEE
T ss_pred CeEEEEECCchhhhhhhhcCC--------------ceEEEEEEe-----cCC-CEEEEecCCEEEEE--ECCCCc--eeE
Confidence 999999999988777765444 489999999 888 58899999999999 666665 667
Q ss_pred eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
.+..|...|.+++|+|+++ +++++.||.|++||+.++...
T Consensus 261 ~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 261 VITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred EEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 7888999999999999998 667999999999999876554
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=5.3e-25 Score=190.44 Aligned_cols=226 Identities=14% Similarity=0.135 Sum_probs=149.9
Q ss_pred cceEEeeCCCceeEeecCCCCCCCc--eec---chhccccccccceeeeeccccc--CCCCcccccccCCCCCccEEEEe
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPL--ITA---DQYASRSAMLHSLAVAWSPVLR--LSSKKYPVPQNGSSNWFSILAVG 90 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~w~p~~~--~~~~~~~v~~~~~s~~~~~l~~g 90 (318)
..+++++.|+.|++|+......... ... ....+.. .+..+.|++... ...|...+....+++++.+|+++
T Consensus 31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~ 107 (393)
T 4gq1_A 31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGL---PTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACV 107 (393)
T ss_dssp TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSS---CEEEEEECTTCEEECC----------CCEEEEEEEEE
T ss_pred CCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCC---CeeeEeecCCccccccccCCCcceeecCCCCCEEEEE
Confidence 3467777899999997643222111 110 0111111 233477776543 22355556666677778999999
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCC-CCCCCcEEEEEeCCCcEEEEECCCcce
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSD-SSNPQVLLVTGSSDGSVRIWDGYIQEL 169 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-~~~~~~~l~s~~~d~~v~iwd~~~~~~ 169 (318)
+.|++|+|||.++++... ...+..+.+|.+.|++++|.|.... ...++++|++|+.|++|+|||++++..
T Consensus 108 ~~d~~v~lw~~~~~~~~~---------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIIT---------QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp ETTSCEEEEEEETTEEEE---------EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred eCCCcEEEEECCCCccce---------eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 999999999999875421 2345567899999999999776532 234789999999999999999987766
Q ss_pred eeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCeeeE--------------
Q 021036 170 QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKFDK-------------- 234 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~-------------- 234 (318)
...+.. |..++.+++|+ |++ .+|++|+.|++|++||+ ++++...
T Consensus 179 ~~~~~~--------------~~~~v~~v~~~-----p~~~~~l~~~~~d~~v~~wd~--~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 179 ILAGYP--------------LSSPGISVQFR-----PSNPNQLIVGERNGNIRIFDW--TLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EEEEEE--------------CSSCEEEEEEE-----TTEEEEEEEEETTSEEEEEET--TCCC----------CSCCCSE
T ss_pred eeeecC--------------CCCCcEEEEEC-----CCCCceEEecCCCCEEEEEEC--CCCcccccccccCCcccceEE
Confidence 555443 33488999999 776 58999999999999954 3332100
Q ss_pred ---------eeeeecccCceeEEEEc-CCCCEEEEecCCCcEEEEEecCCce
Q 021036 235 ---------VGSYNAHDQVVTGLAWA-FDGCCLYSCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 235 ---------~~~~~~h~~~v~~~~~~-~~~~~l~s~~~d~~v~iwd~~~~~~ 276 (318)
.....+|...+.++.|+ |+++.|++++.|+++++||+..+..
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 01124577888999987 7999999999999999999987543
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1.6e-23 Score=180.78 Aligned_cols=212 Identities=15% Similarity=0.127 Sum_probs=162.1
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEE-EEecCCCcE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSIL-AVGGRSGKV 96 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l-~~g~~dg~i 96 (318)
..+++++.|+.|++||+.+++.+..+... .. +.+++|+|++ ++| ++++.|+.|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-----~~---~~~~~~s~dg------------------~~l~~~~~~d~~i 56 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-----SN---PMGAVISPDG------------------TKVYVANAHSNDV 56 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-----SS---EEEEEECTTS------------------SEEEEEEGGGTEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-----CC---cceEEECCCC------------------CEEEEECCCCCeE
Confidence 45788999999999999988766555431 11 3458888887 665 778899999
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE-EeCCCcEEEEECCCcceeeeecc
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT-GSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
++||..+++ .+..+..+. .+.+++| ++++++|+. ++.|+.|++||+.+++....+..
T Consensus 57 ~v~d~~~~~--------------~~~~~~~~~-~v~~~~~-------spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 57 SIIDTATNN--------------VIATVPAGS-SPQGVAV-------SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp EEEETTTTE--------------EEEEEECSS-SEEEEEE-------CTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCe--------------EEEEEECCC-CccceEE-------CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC
Confidence 999998854 445555444 8999999 889987754 55679999999999887766543
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEE-EEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLL-AVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG 254 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 254 (318)
+. .+.+++|+ |+++.+ ++++.++.|++| +..+++ .+..+..+ ..+.+++|+|++
T Consensus 115 ~~---------------~~~~~~~s-----~dg~~l~~~~~~~~~v~~~--d~~~~~--~~~~~~~~-~~~~~~~~~~dg 169 (391)
T 1l0q_A 115 GK---------------SPLGLALS-----PDGKKLYVTNNGDKTVSVI--NTVTKA--VINTVSVG-RSPKGIAVTPDG 169 (391)
T ss_dssp SS---------------SEEEEEEC-----TTSSEEEEEETTTTEEEEE--ETTTTE--EEEEEECC-SSEEEEEECTTS
T ss_pred CC---------------CcceEEEC-----CCCCEEEEEeCCCCEEEEE--ECCCCc--EEEEEecC-CCcceEEECCCC
Confidence 32 57899999 899876 688889999999 566665 44555544 456999999999
Q ss_pred CEE-EEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 255 CCL-YSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 255 ~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+++ ++++.|+.|++||++++......... ..+.+++|+|++++|+++.
T Consensus 170 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 170 TKVYVANFDSMSISVIDTVTNSVIDTVKVE---------------AAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECS---------------SEEEEEEECTTSSEEEEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEecC---------------CCccceEECCCCCEEEEEe
Confidence 877 67788999999999887665433222 3778999999999887763
No 122
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.5e-24 Score=183.70 Aligned_cols=193 Identities=9% Similarity=-0.025 Sum_probs=147.1
Q ss_pred CCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc-
Q 021036 70 SKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV- 148 (318)
Q Consensus 70 ~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~- 148 (318)
.|...|.++++++++++|++++.||.|++|++.+++. ......+.+|...|.+++| +++++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~-----------~~~~~~~~~~~~~v~~~~~-------~~~~~~ 70 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK-----------NVDLLQSLRYKHPLLCCNF-------IDNTDL 70 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT-----------EEEEEEEEECSSCEEEEEE-------EESSSE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc-----------cccceeeeecCCceEEEEE-------CCCCCc
Confidence 3455555555555569999999999999999987542 1234455689999999999 78899
Q ss_pred EEEEEeCCCcEEEEEC-CCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 149 LLVTGSSDGSVRIWDG-YIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 149 ~l~s~~~d~~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
+|++++.||.|++||+ .+++. ..+.. ..|...|.+++|+ | +.+|++++.|+.|++|++..
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~-~~~~~------------~~~~~~v~~l~~~-----~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSF-QALTN------------NEANLGICRICKY-----G-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSE-EECBS------------CCCCSCEEEEEEE-----T-TTEEEEEETTSEEEEECHHH
T ss_pred EEEEEcCCCeEEEEEeccCCce-Eeccc------------cCCCCceEEEEeC-----C-CCEEEEEcCCCeEEEEcccc
Confidence 9999999999999999 77654 33332 0145589999999 8 99999999999999995442
Q ss_pred CC-------CeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecC-Ccee-eeecCCCCCCccccccCCCcc
Q 021036 228 SC-------NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHG-NSLS-QVSIPTNTPGLQSCTDLPDAF 298 (318)
Q Consensus 228 ~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~h~ 298 (318)
.. .+ ++..+. |...|.+++|+|++ +++++.|+.|++||+++ .... ..... .|.
T Consensus 132 ~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~~ 193 (342)
T 1yfq_A 132 YGDGVIAVKNL--NSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEES-------------GLK 193 (342)
T ss_dssp HTTBCEEEEES--CSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEEC-------------SCS
T ss_pred cccccccccCC--eeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeec-------------CCC
Confidence 00 22 444555 88999999999987 99999999999999987 4432 11111 234
Q ss_pred eeeeEEEEcC-CCcEEEEEe
Q 021036 299 VSCLGMAVSP-GNLVVAMVQ 317 (318)
Q Consensus 299 ~~v~~v~~sp-~~~~l~~~~ 317 (318)
..+.+++|+| ++++++++.
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEE
T ss_pred CceeEEEECCCCCCEEEEEe
Confidence 5899999999 999999874
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=5.5e-23 Score=179.79 Aligned_cols=220 Identities=10% Similarity=0.049 Sum_probs=165.8
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchh-ccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQY-ASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSG 94 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg 94 (318)
+...+++++.|+.+++||+.+++....+..... .|... +.+++|+|++ +++++++.|+
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~---v~~~~~~~~~------------------~~~~s~~~d~ 191 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGF---VETISIPEHN------------------ELWVSQMQAN 191 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCE---EEEEEEGGGT------------------EEEEEEGGGT
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCc---eeEEEEcCCC------------------EEEEEECCCC
Confidence 556677888899999999998876543332111 12222 3446676665 9999999999
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE-EEeCCCcEEEEECCCcceeeee
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV-TGSSDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~ 173 (318)
.|++||+++++ .+..+..|...+.+++| ++++++++ +++.|+.|++||+++++....+
T Consensus 192 ~v~~~d~~~~~--------------~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 192 AVHVFDLKTLA--------------YKATVDLTGKWSKILLY-------DPIRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp EEEEEETTTCC--------------EEEEEECSSSSEEEEEE-------ETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred EEEEEECCCce--------------EEEEEcCCCCCeeEEEE-------cCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 99999998744 55667788899999999 88888775 5557999999999988776665
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe--------CCCcEEEeeeccCCCeeeEeeeeecccCce
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK--------GSGSFDLWKCDISCNKFDKVGSYNAHDQVV 245 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~--------~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v 245 (318)
..+. .+.+++|+ |+++.+++++ .||.|++| +.++++ .+..+ .|...+
T Consensus 251 ~~~~---------------~~~~~~~~-----~~g~~l~~~~~~~~~~~~~dg~i~~~--d~~~~~--~~~~~-~~~~~~ 305 (433)
T 3bws_A 251 DKIG---------------LPRGLLLS-----KDGKELYIAQFSASNQESGGGRLGIY--SMDKEK--LIDTI-GPPGNK 305 (433)
T ss_dssp CCCS---------------EEEEEEEC-----TTSSEEEEEEEESCTTCSCCEEEEEE--ETTTTE--EEEEE-EEEECE
T ss_pred cCCC---------------CceEEEEc-----CCCCEEEEEECCCCccccCCCeEEEE--ECCCCc--EEeec-cCCCCc
Confidence 5332 57899999 9999998888 48899999 555665 33333 456688
Q ss_pred eEEEEcCCCCE-EEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 246 TGLAWAFDGCC-LYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 246 ~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+++|+|+++. +++++.|+.|++||+.+++........ ..+.+++|+|+|++|+++.
T Consensus 306 ~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~~~~ 363 (433)
T 3bws_A 306 RHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF---------------DKPNTIALSPDGKYLYVSC 363 (433)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTSSEEEEEE
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC---------------CCCCeEEEcCCCCEEEEEe
Confidence 99999999974 567799999999999887655433222 3678999999999887763
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=1.1e-23 Score=179.63 Aligned_cols=222 Identities=12% Similarity=0.055 Sum_probs=146.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccC-------------------CCCccccc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRL-------------------SSKKYPVP 76 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~-------------------~~~~~~v~ 76 (318)
.....++++.|+++++||+.+++.+..+.. ... +.++.|+++... .....+..
T Consensus 70 ~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~-----~~~---v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 141 (355)
T 3vu4_A 70 TNYVAFVTGVKEVVHIWDDVKKQDVSRIKV-----DAP---VKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGG 141 (355)
T ss_dssp SSEEEEECSSTTEEEEEETTTTEEEEEEEC-----SSC---EEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEE
T ss_pred CCEEEEEECCccEEEEEECCCCcEEEEEEC-----CCc---eEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCc
Confidence 334457788999999999999877665542 122 233444443210 00000122
Q ss_pred ccCCCCCccEEEE--ecCCCcEEEEEccCCcccccccccc-CCceeE-EeeeccccccEEEEEeeeecCCCCCCCcEEEE
Q 021036 77 QNGSSNWFSILAV--GGRSGKVSLWRICVPKCYSVEDCKV-PTTAVL-IGLFQAHNSWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 77 ~~~~s~~~~~l~~--g~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
.+++++ .+++. |+.||.|++||+.+++......... .....+ +..+.+|...|++++| ++++++|++
T Consensus 142 ~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~-------s~~g~~l~s 212 (355)
T 3vu4_A 142 VCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL-------NRKSDMVAT 212 (355)
T ss_dssp EEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEE-------CTTSSEEEE
T ss_pred eEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE-------CCCCCEEEE
Confidence 223333 45555 6899999999998754110000000 000112 5678899999999999 899999999
Q ss_pred EeCCCc-EEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCe
Q 021036 153 GSSDGS-VRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNK 231 (318)
Q Consensus 153 ~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 231 (318)
|+.|++ |++||+++++++..+... .|...|.+++|+ |++++|++++.|++|++|+++.....
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g------------~h~~~v~~~~~s-----~~~~~l~s~s~d~~v~iw~~~~~~~~ 275 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRG------------LDRADVVDMKWS-----TDGSKLAVVSDKWTLHVFEIFNDQDN 275 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECT------------TCCSCEEEEEEC-----TTSCEEEEEETTCEEEEEESSCCSCC
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcC------------CCCCcEEEEEEC-----CCCCEEEEEECCCEEEEEEccCCCCc
Confidence 999998 999999999888776510 034489999999 99999999999999999965432211
Q ss_pred eeEeeee---------------------ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 021036 232 FDKVGSY---------------------NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHG 273 (318)
Q Consensus 232 ~~~~~~~---------------------~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 273 (318)
....+ ..+......++|+++++++++++.||.+++|++..
T Consensus 276 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 276 --KRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp --CSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred --ccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 11111 01122346789999999999999999999999875
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=2.5e-22 Score=173.31 Aligned_cols=215 Identities=19% Similarity=0.145 Sum_probs=160.2
Q ss_pred CCCCCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEE-EEe
Q 021036 12 MKDSNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSIL-AVG 90 (318)
Q Consensus 12 ~~~~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l-~~g 90 (318)
+.+.....+++++.|+++++||+.+++.+..+... . .+.+++|+|++ ++| +++
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-----~---~v~~~~~spdg------------------~~l~~~~ 92 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-----S---SPQGVAVSPDG------------------KQVYVTN 92 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-----S---SEEEEEECTTS------------------SEEEEEE
T ss_pred ECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-----C---CccceEECCCC------------------CEEEEEE
Confidence 34444444578889999999999988775555431 1 24458888877 665 566
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEE-EEEeCCCcEEEEECCCcce
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLL-VTGSSDGSVRIWDGYIQEL 169 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~ 169 (318)
+.++.|++||+.+++ .+..+.. ...+.+++| ++++++| ++++.|+.|++||+.+++.
T Consensus 93 ~~~~~v~v~d~~~~~--------------~~~~~~~-~~~~~~~~~-------s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 93 MASSTLSVIDTTSNT--------------VAGTVKT-GKSPLGLAL-------SPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp TTTTEEEEEETTTTE--------------EEEEEEC-SSSEEEEEE-------CTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCe--------------EEEEEeC-CCCcceEEE-------CCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 678999999999854 3444444 456899999 8898877 6888899999999998887
Q ss_pred eeeecccccccccceeeeeecccceeEEEEeeccCCCCceEE-EEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEE
Q 021036 170 QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLL-AVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGL 248 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 248 (318)
...+..+. .+..++|+ |+++.+ ++++.++.|++| |.++++ .+..+. +...+.++
T Consensus 151 ~~~~~~~~---------------~~~~~~~~-----~dg~~l~~~~~~~~~v~~~--d~~~~~--~~~~~~-~~~~~~~~ 205 (391)
T 1l0q_A 151 INTVSVGR---------------SPKGIAVT-----PDGTKVYVANFDSMSISVI--DTVTNS--VIDTVK-VEAAPSGI 205 (391)
T ss_dssp EEEEECCS---------------SEEEEEEC-----TTSSEEEEEETTTTEEEEE--ETTTTE--EEEEEE-CSSEEEEE
T ss_pred EEEEecCC---------------CcceEEEC-----CCCCEEEEEeCCCCEEEEE--ECCCCe--EEEEEe-cCCCccce
Confidence 76655433 56889999 898776 677889999999 566665 344443 56678999
Q ss_pred EEcCCCCEEEEec---CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEE
Q 021036 249 AWAFDGCCLYSCS---QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVA 314 (318)
Q Consensus 249 ~~~~~~~~l~s~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~ 314 (318)
+|+|++++|++++ .++.|++||+.+++......... .+.+++|+|++++|+
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP---------------DPAGIAVTPDGKKVY 259 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS---------------SEEEEEECTTSSEEE
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC---------------CccEEEEccCCCEEE
Confidence 9999999888887 68999999998876543322221 468999999998774
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=1e-21 Score=171.69 Aligned_cols=214 Identities=12% Similarity=0.048 Sum_probs=160.5
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEE-EEecCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSIL-AVGGRSG 94 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l-~~g~~dg 94 (318)
+...+++++.|+.+++||+.+++.+..+.. +... +.+++|+|++ +++ ++++.|+
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~----~~~~---~~~~~~~~~~------------------~~l~~~~~~~~ 234 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDL----TGKW---SKILLYDPIR------------------DLVYCSNWISE 234 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEEC----SSSS---EEEEEEETTT------------------TEEEEEETTTT
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcC----CCCC---eeEEEEcCCC------------------CEEEEEecCCC
Confidence 345678899999999999998776554432 2222 3457888877 666 5666899
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe--------CCCcEEEEECCC
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS--------SDGSVRIWDGYI 166 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~--------~d~~v~iwd~~~ 166 (318)
.|++||+.+++ .+..+..+ ..+.+++| ++++++|++++ .|+.|++||+.+
T Consensus 235 ~i~~~d~~~~~--------------~~~~~~~~-~~~~~~~~-------~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 235 DISVIDRKTKL--------------EIRKTDKI-GLPRGLLL-------SKDGKELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp EEEEEETTTTE--------------EEEECCCC-SEEEEEEE-------CTTSSEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred cEEEEECCCCc--------------EEEEecCC-CCceEEEE-------cCCCCEEEEEECCCCccccCCCeEEEEECCC
Confidence 99999998754 44455543 45899999 89999999888 488999999998
Q ss_pred cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCce
Q 021036 167 QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVV 245 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v 245 (318)
++....+. +...+..++|+ |+++ ++++++.++.|++| +..+++ .+..+. +...+
T Consensus 293 ~~~~~~~~---------------~~~~~~~~~~~-----~~g~~l~~~~~~~~~v~v~--d~~~~~--~~~~~~-~~~~~ 347 (433)
T 3bws_A 293 EKLIDTIG---------------PPGNKRHIVSG-----NTENKIYVSDMCCSKIEVY--DLKEKK--VQKSIP-VFDKP 347 (433)
T ss_dssp TEEEEEEE---------------EEECEEEEEEC-----SSTTEEEEEETTTTEEEEE--ETTTTE--EEEEEE-CSSSE
T ss_pred CcEEeecc---------------CCCCcceEEEC-----CCCCEEEEEecCCCEEEEE--ECCCCc--EEEEec-CCCCC
Confidence 87655442 22367789998 8885 56777899999999 555655 444444 67789
Q ss_pred eEEEEcCCCCEEEEecC---------------CCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCC
Q 021036 246 TGLAWAFDGCCLYSCSQ---------------DNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGN 310 (318)
Q Consensus 246 ~~~~~~~~~~~l~s~~~---------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 310 (318)
.+++|+|+|+++++++. ||.|++||+.+++........ ..+.+++|+|+|
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg 412 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG---------------NQPTGLDVSPDN 412 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS---------------SSEEEEEECTTS
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC---------------CCCceEEEcCCC
Confidence 99999999998888776 579999999887665433222 267999999999
Q ss_pred cEEEEE
Q 021036 311 LVVAMV 316 (318)
Q Consensus 311 ~~l~~~ 316 (318)
++|+++
T Consensus 413 ~~l~~~ 418 (433)
T 3bws_A 413 RYLVIS 418 (433)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 998865
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=2.5e-21 Score=168.56 Aligned_cols=212 Identities=12% Similarity=0.053 Sum_probs=153.1
Q ss_pred ceEEeeCC------CceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecC
Q 021036 19 PTVAASKS------KGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGR 92 (318)
Q Consensus 19 ~~~t~s~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~ 92 (318)
.++.++.+ +++++||+..+ ....+.. +... +.+++|+|++ ++|++++.
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~----~~~~---v~~~~~Spdg------------------~~la~~s~ 198 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHR----SPQP---LMSPAWSPDG------------------SKLAYVTF 198 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTSC-SCEEEEE----ESSC---EEEEEECTTS------------------SEEEEEEC
T ss_pred EEEEEEecCCCCccceEEEEcCCCC-CCEEEeC----CCCc---ceeeEEcCCC------------------CEEEEEEe
Confidence 45555544 79999999743 3333322 3333 4457888877 89999988
Q ss_pred CC---cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE-EEeCCCc--EEEEECCC
Q 021036 93 SG---KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV-TGSSDGS--VRIWDGYI 166 (318)
Q Consensus 93 dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~-s~~~d~~--v~iwd~~~ 166 (318)
++ .|++||+.+++. ..+..|...+.+++| +|+|++|+ +++.|+. |++||+.+
T Consensus 199 ~~~~~~i~~~d~~tg~~---------------~~l~~~~~~~~~~~~-------spdg~~la~~~~~~g~~~i~~~d~~~ 256 (415)
T 2hqs_A 199 ESGRSALVIQTLANGAV---------------RQVASFPRHNGAPAF-------SPDGSKLAFALSKTGSLNLYVMDLAS 256 (415)
T ss_dssp TTSSCEEEEEETTTCCE---------------EEEECCSSCEEEEEE-------CTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred cCCCcEEEEEECCCCcE---------------EEeecCCCcccCEEE-------cCCCCEEEEEEecCCCceEEEEECCC
Confidence 75 999999998652 245667789999999 89999877 6666654 99999988
Q ss_pred cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC-CCcEEEeeeccCCCeeeEeeeeecccCce
Q 021036 167 QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG-SGSFDLWKCDISCNKFDKVGSYNAHDQVV 245 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~h~~~v 245 (318)
++.. .+.. +...+.+++|+ |+|+.|++++. ++...+|.++..+++. ..+..+...+
T Consensus 257 ~~~~-~l~~--------------~~~~~~~~~~s-----pdg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~ 313 (415)
T 2hqs_A 257 GQIR-QVTD--------------GRSNNTEPTWF-----PDSQNLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQN 313 (415)
T ss_dssp CCEE-ECCC--------------CSSCEEEEEEC-----TTSSEEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEE
T ss_pred CCEE-eCcC--------------CCCcccceEEC-----CCCCEEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcc
Confidence 7653 3322 23478899999 99998888775 5655555556666652 2344567788
Q ss_pred eEEEEcCCCCEEEEecCC---CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 246 TGLAWAFDGCCLYSCSQD---NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 246 ~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
.+++|+|+|++|++++.+ ..|++||+.++....+..+. .+.+++|+|||++|+++.
T Consensus 314 ~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~----------------~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 314 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF----------------LDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS----------------SCEEEEECTTSSEEEEEE
T ss_pred cCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC----------------CcCCeEEcCCCCEEEEEE
Confidence 999999999999888764 58999999987765433221 678999999999888763
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=2.5e-21 Score=168.53 Aligned_cols=231 Identities=10% Similarity=-0.002 Sum_probs=153.5
Q ss_pred CccceEEee----CCC----ceeEeec--CCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCcc
Q 021036 16 NTHPTVAAS----KSK----GNSITKI--PSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFS 85 (318)
Q Consensus 16 ~~~~~~t~s----~d~----~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~ 85 (318)
+...+++|+ .|| ++++||+ .+++++....... +...+. .+++++...+.. .... .....+.
T Consensus 74 g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~d~~~~---~~~g-~~~~~~~ 144 (415)
T 2hqs_A 74 GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKV--NKQWLR---YAGHTASDEVFE---KLTG-IKGAFRT 144 (415)
T ss_dssp TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEE--CGGGHH---HHHHHHHHHHHH---HHHS-SCCCTTC
T ss_pred CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEc--ChhHHH---HHHHHHHHHHHH---HHcC-CCCcCCC
Confidence 344466776 567 8999999 8887653322211 222211 133333110000 0000 0001124
Q ss_pred EEEEecCC------CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC--
Q 021036 86 ILAVGGRS------GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG-- 157 (318)
Q Consensus 86 ~l~~g~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~-- 157 (318)
.++.++.+ +.|++||++.+. .+.+.+|...|.+++| +|+|++|++++.++
T Consensus 145 ~l~~~s~~~~~~~~~~i~i~d~~g~~---------------~~~l~~~~~~v~~~~~-------Spdg~~la~~s~~~~~ 202 (415)
T 2hqs_A 145 RIAYVVQTNGGQFPYELRVSDYDGYN---------------QFVVHRSPQPLMSPAW-------SPDGSKLAYVTFESGR 202 (415)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTSCS---------------CEEEEEESSCEEEEEE-------CTTSSEEEEEECTTSS
T ss_pred EEEEEEecCCCCccceEEEEcCCCCC---------------CEEEeCCCCcceeeEE-------cCCCCEEEEEEecCCC
Confidence 55555443 799999997532 3556778999999999 99999999999885
Q ss_pred -cEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEE-EEeCCCc--EEEeeeccCCCeee
Q 021036 158 -SVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLA-VGKGSGS--FDLWKCDISCNKFD 233 (318)
Q Consensus 158 -~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-~~~~dg~--i~vw~~~~~~~~~~ 233 (318)
.|++||+.+++... +.. +...+.+++|+ |+|+.|+ +++.++. |++| +..+++
T Consensus 203 ~~i~~~d~~tg~~~~-l~~--------------~~~~~~~~~~s-----pdg~~la~~~~~~g~~~i~~~--d~~~~~-- 258 (415)
T 2hqs_A 203 SALVIQTLANGAVRQ-VAS--------------FPRHNGAPAFS-----PDGSKLAFALSKTGSLNLYVM--DLASGQ-- 258 (415)
T ss_dssp CEEEEEETTTCCEEE-EEC--------------CSSCEEEEEEC-----TTSSEEEEEECTTSSCEEEEE--ETTTCC--
T ss_pred cEEEEEECCCCcEEE-eec--------------CCCcccCEEEc-----CCCCEEEEEEecCCCceEEEE--ECCCCC--
Confidence 99999999887543 222 23378899999 9999777 6666666 6666 666665
Q ss_pred EeeeeecccCceeEEEEcCCCCEEEEecC-CC--cEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCC
Q 021036 234 KVGSYNAHDQVVTGLAWAFDGCCLYSCSQ-DN--FVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGN 310 (318)
Q Consensus 234 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 310 (318)
...+..|...+.+++|+|+|++|++++. ++ .|++||+.++....+..+ ...+.+++|+|||
T Consensus 259 -~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---------------~~~~~~~~~spdG 322 (415)
T 2hqs_A 259 -IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---------------GSQNQDADVSSDG 322 (415)
T ss_dssp -EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---------------SSEEEEEEECTTS
T ss_pred -EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---------------CCcccCeEECCCC
Confidence 2456678889999999999998888776 44 677778887765543322 2377899999999
Q ss_pred cEEEEEe
Q 021036 311 LVVAMVQ 317 (318)
Q Consensus 311 ~~l~~~~ 317 (318)
++|+++.
T Consensus 323 ~~l~~~~ 329 (415)
T 2hqs_A 323 KFMVMVS 329 (415)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 9998763
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.6e-21 Score=170.46 Aligned_cols=195 Identities=15% Similarity=0.112 Sum_probs=134.3
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCce-eEEeeeccccccEEEEEeeeecCCCCCCCcEEE----EEeCCCcE
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTA-VLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV----TGSSDGSV 159 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~----s~~~d~~v 159 (318)
.++++++.|+ +++|+...-.............. ........+...|.+++| ++++++|+ +++.|+.|
T Consensus 49 ~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-------spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 49 GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL-------SCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE-------CTTSCEEEEEEEETTTEEEE
T ss_pred CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE-------cCCCCEEEEEEeccCCCceE
Confidence 8999999888 99988653110000000000000 000011235678999999 89999999 78899999
Q ss_pred EEEECCCcc--------eeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCCCcEEEeeeccCCC
Q 021036 160 RIWDGYIQE--------LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGSGSFDLWKCDISCN 230 (318)
Q Consensus 160 ~iwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~dg~i~vw~~~~~~~ 230 (318)
++||+.++. .+..+ .....|...|.+++|+ |+ +.+|++++.||+|++|| .+++
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~-----------~~~~~h~~~V~~v~~~-----p~~~~~las~s~Dg~v~iwD--~~~~ 182 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYH-----------KLLKDAGGMVIDMKWN-----PTVPSMVAVCLADGSIAVLQ--VTET 182 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEE-----------ECCCSGGGSEEEEEEC-----SSCTTEEEEEETTSCEEEEE--ESSS
T ss_pred EEEEccccccCCcCCcceeeee-----------eccCCCCCceEEEEEC-----CCCCCEEEEEECCCeEEEEE--cCCC
Confidence 999987651 11111 1123466799999999 76 89999999999999995 5555
Q ss_pred eeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCC
Q 021036 231 KFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGN 310 (318)
Q Consensus 231 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 310 (318)
. .+....+|...|++++|+|+|++|++|+.||+|++||++......+..+.. ....|...|.+++|++++
T Consensus 183 ~--~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~--------~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 183 V--KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPF--------YESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp E--EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTT--------CCTTSCEEEEEEEEEETT
T ss_pred c--ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcc--------cCCCCceeEEEEEEecCc
Confidence 4 444556788999999999999999999999999999998333333322221 112355689999999999
Q ss_pred cEEEE
Q 021036 311 LVVAM 315 (318)
Q Consensus 311 ~~l~~ 315 (318)
.++++
T Consensus 253 ~~l~~ 257 (434)
T 2oit_A 253 VFAIV 257 (434)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88854
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=6.3e-19 Score=148.43 Aligned_cols=220 Identities=11% Similarity=0.004 Sum_probs=151.4
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEE-ecCCC
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAV-GGRSG 94 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~-g~~dg 94 (318)
....+++.+.++.|++||..+++....+... ... . .++|+|++ +++++ +..++
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~----~~~---~-~~~~s~dg------------------~~l~~~~~~~~ 62 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLG----YDF---V-DTAITSDC------------------SNVVVTSDFCQ 62 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECC----CCE---E-EEEECSSS------------------CEEEEEESTTC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEcc----CCc---c-eEEEcCCC------------------CEEEEEeCCCC
Confidence 3455788899999999999998875555431 111 1 37788877 75554 45589
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC---cEEEEECCCcceee
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG---SVRIWDGYIQELQK 171 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~---~v~iwd~~~~~~~~ 171 (318)
.|.+||..+++. ....+..+..+..+++| ++++++|+++..++ .|.+||+.+++...
T Consensus 63 ~i~~~d~~~~~~-------------~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 63 TLVQIETQLEPP-------------KVVAIQEGQSSMADVDI-------TPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEEECSSSSC-------------EEEEEEECSSCCCCEEE-------CTTSSEEEECCCSSSSCEEEEEETTTTEEEE
T ss_pred eEEEEECCCCce-------------eEEecccCCCCccceEE-------CCCCCEEEEecCCCCcccEEEEECCCCCeEE
Confidence 999999988642 14455566666666999 89999999655553 89999999888766
Q ss_pred eecccccccccceeeeeecccceeEEEEeeccCCCCceEEEE-EeCCCc-EEEeeeccCCCeeeEeeeeecccCceeEEE
Q 021036 172 SAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAV-GKGSGS-FDLWKCDISCNKFDKVGSYNAHDQVVTGLA 249 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~-~~~dg~-i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 249 (318)
.+.... ....++|+ |+|+.+++ +..++. |.+|+++..................+..++
T Consensus 123 ~~~~~~---------------~~~~~~~s-----pdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 182 (331)
T 3u4y_A 123 TIPIPY---------------DAVGIAIS-----PNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNIT 182 (331)
T ss_dssp EEECCT---------------TEEEEEEC-----TTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEE
T ss_pred EEECCC---------------CccceEEC-----CCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceE
Confidence 554322 45789999 99975554 456688 999977633221111112223345678999
Q ss_pred EcCCCCEE-EEecCCCcEEEEEecCCce---eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 250 WAFDGCCL-YSCSQDNFVRSWIFHGNSL---SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 250 ~~~~~~~l-~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
|+|+|+++ +++..++.|.+||+.++.. ....... ..+..++|+|||++|+++
T Consensus 183 ~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---------------~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 183 FTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---------------NLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp ECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---------------SCCCCEEECTTSSEEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---------------CCCceEEECCCCCEEEEE
Confidence 99999955 5555789999999987665 3222111 255789999999977654
No 131
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=9.4e-20 Score=159.26 Aligned_cols=168 Identities=13% Similarity=0.097 Sum_probs=119.7
Q ss_pred ccccccCCCCCccEEE----EecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-C
Q 021036 73 YPVPQNGSSNWFSILA----VGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP-Q 147 (318)
Q Consensus 73 ~~v~~~~~s~~~~~l~----~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~-~ 147 (318)
.+|.+++|++++++|+ +|+.|+.|+|||+.++.... .........+..+.+|...|.+++| +++ +
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~---~~~~~~~~~~~~~~~h~~~V~~v~~-------~p~~~ 162 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEA---KQQKRPFAYHKLLKDAGGMVIDMKW-------NPTVP 162 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTT---CSSCCCSEEEECCCSGGGSEEEEEE-------CSSCT
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCC---cCCcceeeeeeccCCCCCceEEEEE-------CCCCC
Confidence 4556666666669999 89999999999997631000 0000001234567789999999999 666 7
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
.+|++++.||+|++||++++........ |...|++++|+ |+|++|++|+.||.|++| +.
T Consensus 163 ~~las~s~Dg~v~iwD~~~~~~~~~~~~--------------~~~~v~~v~ws-----pdg~~lasgs~dg~v~iw--d~ 221 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTETVKVCATLP--------------STVAVTSVCWS-----PKGKQLAVGKQNGTVVQY--LP 221 (434)
T ss_dssp TEEEEEETTSCEEEEEESSSEEEEEEEC--------------GGGCEEEEEEC-----TTSSCEEEEETTSCEEEE--CT
T ss_pred CEEEEEECCCeEEEEEcCCCcceeeccC--------------CCCceeEEEEc-----CCCCEEEEEcCCCcEEEE--cc
Confidence 8999999999999999998754433322 44589999999 999999999999999999 44
Q ss_pred CCCeeeEeeeeec-------ccCceeEEEEcCCCCEEEE-ecCCC------cEEEEEecCC
Q 021036 228 SCNKFDKVGSYNA-------HDQVVTGLAWAFDGCCLYS-CSQDN------FVRSWIFHGN 274 (318)
Q Consensus 228 ~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s-~~~d~------~v~iwd~~~~ 274 (318)
+. + ....+.. |...|.+++|++++.++++ .+.|| .+++|+++..
T Consensus 222 ~~-~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 222 TL-Q--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TC-C--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CC-c--ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 42 2 2222322 2347999999998877654 33443 3899999764
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=2.2e-19 Score=148.16 Aligned_cols=210 Identities=16% Similarity=0.117 Sum_probs=147.7
Q ss_pred EEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEE
Q 021036 21 VAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWR 100 (318)
Q Consensus 21 ~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~ 100 (318)
..++.|+++++||+.+++...... +... +.+++|+|++ ++|++++ ++.|++||
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~---v~~~~~spdg------------------~~l~~~~-~~~i~~~d 68 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRVVWQ-----TPEL---FEAPNWSPDG------------------KYLLLNS-EGLLYRLS 68 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEEEEE-----ESSC---CEEEEECTTS------------------SEEEEEE-TTEEEEEE
T ss_pred CCCCcceeEEEEeCCCCceeeecc-----CCcc---eEeeEECCCC------------------CEEEEEc-CCeEEEEe
Confidence 346789999999998876532221 2222 4457888877 8888876 78999999
Q ss_pred ccC-CccccccccccCCceeEEeeeccc-cccEEEEEeeeecCCCCCCCcEEEEEe--CCCcEEEEEC--CCcceeeeec
Q 021036 101 ICV-PKCYSVEDCKVPTTAVLIGLFQAH-NSWITSISLAVLSSDSSNPQVLLVTGS--SDGSVRIWDG--YIQELQKSAE 174 (318)
Q Consensus 101 ~~~-~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~l~s~~--~d~~v~iwd~--~~~~~~~~~~ 174 (318)
+.+ ++. ......+ ...+.+++| ++++++|++++ .++...||.+ .+++ ...+.
T Consensus 69 ~~~~~~~--------------~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 126 (297)
T 2ojh_A 69 LAGDPSP--------------EKVDTGFATICNNDHGI-------SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT 126 (297)
T ss_dssp SSSCCSC--------------EECCCTTCCCBCSCCEE-------CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC
T ss_pred CCCCCCc--------------eEeccccccccccceEE-------CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee
Confidence 987 652 2233344 467899999 89999999998 3345555554 4443 22222
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEE-EEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLA-VGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 253 (318)
. ...+..++|+ |+++.|+ +++.++.+++|+++..++. ...+..+...+.+++|+|+
T Consensus 127 ~---------------~~~~~~~~~s-----pdg~~l~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~s~d 183 (297)
T 2ojh_A 127 K---------------NLPSYWHGWS-----PDGKSFTYCGIRDQVFDIYSMDIDSGV---ETRLTHGEGRNDGPDYSPD 183 (297)
T ss_dssp S---------------SSSEEEEEEC-----TTSSEEEEEEEETTEEEEEEEETTTCC---EEECCCSSSCEEEEEECTT
T ss_pred c---------------CCCccceEEC-----CCCCEEEEEECCCCceEEEEEECCCCc---ceEcccCCCccccceECCC
Confidence 1 1147788998 9998777 7788999999988776654 2345567788999999999
Q ss_pred CCEEEEec-CCCcEEEEEecC--CceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 254 GCCLYSCS-QDNFVRSWIFHG--NSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 254 ~~~l~s~~-~d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
|++|+.++ .++.+++|++.. +....+ ..|...+..++|+|+|++|+++.
T Consensus 184 g~~l~~~~~~~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 184 GRWIYFNSSRTGQMQIWRVRVDGSSVERI---------------TDSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCEEEC---------------CCCSEEEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEecCCCCccEEEECCCCCCcEEE---------------ecCCcccCCeEECCCCCEEEEEE
Confidence 99877665 589999999863 233222 22345789999999999988753
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=1.1e-18 Score=147.24 Aligned_cols=227 Identities=14% Similarity=0.082 Sum_probs=142.5
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC-CcEEE
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS-GKVSL 98 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d-g~i~i 98 (318)
+++++.|+.+++||+........+. ...+... +..++|+|++ ++|++++.+ +.|++
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~spdg------------------~~l~~~~~~~~~v~~ 64 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQ--VVDVPGQ---VQPMVVSPDK------------------RYLYVGVRPEFRVLA 64 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEE--EEECSSC---CCCEEECTTS------------------SEEEEEETTTTEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEee--eEecCCC---CceEEECCCC------------------CEEEEeecCCCeEEE
Confidence 4555789999999996422111111 1112222 3336777766 877777766 99999
Q ss_pred EEcc--CCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC-CCcEEEEECCCc---ceeee
Q 021036 99 WRIC--VPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS-DGSVRIWDGYIQ---ELQKS 172 (318)
Q Consensus 99 w~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~---~~~~~ 172 (318)
|++. +++ .+.+..+..+. .+..++| ++++++|++++. ++.|.+||+..+ +....
T Consensus 65 ~~~~~~~~~------------~~~~~~~~~~~-~~~~~~~-------s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 124 (343)
T 1ri6_A 65 YRIAPDDGA------------LTFAAESALPG-SLTHIST-------DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 124 (343)
T ss_dssp EEECTTTCC------------EEEEEEEECSS-CCSEEEE-------CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE
T ss_pred EEecCCCCc------------eeeccccccCC-CCcEEEE-------cCCCCEEEEEecCCCeEEEEECCCCcccccccc
Confidence 9997 443 23444454444 7889999 899998876665 889999999532 22222
Q ss_pred ecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-CCCcEEEeeeccCCCeeeEee--eeec-ccCceeEE
Q 021036 173 AEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCDISCNKFDKVG--SYNA-HDQVVTGL 248 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~--~~~~-h~~~v~~~ 248 (318)
+.. ...+.+++|+ |+++.+++++ .++.|++|+++.. ++...+. .+.. ....+..+
T Consensus 125 ~~~---------------~~~~~~~~~s-----~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~ 183 (343)
T 1ri6_A 125 VEG---------------LDGCHSANIS-----PDNRTLWVPALKQDRICLFTVSDD-GHLVAQDPAEVTTVEGAGPRHM 183 (343)
T ss_dssp ECC---------------CTTBCCCEEC-----TTSSEEEEEEGGGTEEEEEEECTT-SCEEEEEEEEEECSTTCCEEEE
T ss_pred ccC---------------CCCceEEEEC-----CCCCEEEEecCCCCEEEEEEecCC-CceeeecccccccCCCCCcceE
Confidence 221 1257788999 9998888777 8999999965421 4332322 2332 33478889
Q ss_pred EEcCCCCEEE-EecCCCcEEEEEecC--CceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 249 AWAFDGCCLY-SCSQDNFVRSWIFHG--NSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 249 ~~~~~~~~l~-s~~~d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+|+|++++++ ++..++.|.+|++.. +...........+ ........+..++|+|+|++|+++
T Consensus 184 ~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 184 VFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP------ENFSDTRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC------TTCCSCCCEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccC------ccccccCCccceEECCCCCEEEEE
Confidence 9999999665 445889999999953 3332111100000 000112356789999999887643
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=2.7e-19 Score=147.65 Aligned_cols=219 Identities=11% Similarity=-0.027 Sum_probs=146.9
Q ss_pred ceEEeeCCCceeEeecCC-CCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEec--CCCc
Q 021036 19 PTVAASKSKGNSITKIPS-NCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG--RSGK 95 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~--~dg~ 95 (318)
.++++ .++.+.+||+.+ ++........ .... +.+++|+|++ ++|++++ .++.
T Consensus 55 ~l~~~-~~~~i~~~d~~~~~~~~~~~~~~---~~~~---~~~~~~spdg------------------~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 55 YLLLN-SEGLLYRLSLAGDPSPEKVDTGF---ATIC---NNDHGISPDG------------------ALYAISDKVEFGK 109 (297)
T ss_dssp EEEEE-ETTEEEEEESSSCCSCEECCCTT---CCCB---CSCCEECTTS------------------SEEEEEECTTTSS
T ss_pred EEEEE-cCCeEEEEeCCCCCCceEecccc---cccc---ccceEECCCC------------------CEEEEEEeCCCCc
Confidence 34444 488999999988 6553322110 1111 3346777776 8998888 4456
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE-EEeCCCcEEEEECCC-cceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV-TGSSDGSVRIWDGYI-QELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~-s~~~d~~v~iwd~~~-~~~~~~~ 173 (318)
.+||.++... . ....+..+ ..+..++| ++++++|+ +++.|+.+++|+++. +.....+
T Consensus 110 ~~l~~~~~~~------------~-~~~~~~~~-~~~~~~~~-------spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 110 SAIYLLPSTG------------G-TPRLMTKN-LPSYWHGW-------SPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp CEEEEEETTC------------C-CCEECCSS-SSEEEEEE-------CTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ceEEEEECCC------------C-ceEEeecC-CCccceEE-------CCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 6666664321 1 12233333 34889999 89998777 788899999998642 2222222
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcC
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAF 252 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 252 (318)
.. +...+.+++|+ |+++.|+.++ .++.+++|+++..... +..+..|...+..++|+|
T Consensus 169 ~~--------------~~~~~~~~~~s-----~dg~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~s~ 226 (297)
T 2ojh_A 169 TH--------------GEGRNDGPDYS-----PDGRWIYFNSSRTGQMQIWRVRVDGSS---VERITDSAYGDWFPHPSP 226 (297)
T ss_dssp CC--------------SSSCEEEEEEC-----TTSSEEEEEECTTSSCEEEEEETTSSC---EEECCCCSEEEEEEEECT
T ss_pred cc--------------CCCccccceEC-----CCCCEEEEEecCCCCccEEEECCCCCC---cEEEecCCcccCCeEECC
Confidence 21 23478899999 9999877666 5999999987765544 345666777899999999
Q ss_pred CCCEEEEecCC-----------CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 253 DGCCLYSCSQD-----------NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 253 ~~~~l~s~~~d-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+|++|++++.+ +.|++||+.+++...+.... +|...+..++|+||+++|+++.
T Consensus 227 dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 227 SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF------------GGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE------------ESTTTSCSCCBCTTSSEEEEEE
T ss_pred CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC------------CCCcccccceECCCCCEEEEEE
Confidence 99999888766 56999999887654332110 1223678899999999988763
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=4.1e-18 Score=143.86 Aligned_cols=228 Identities=13% Similarity=0.085 Sum_probs=143.8
Q ss_pred cceEEeeCC-CceeEeecC--CCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEe-cCC
Q 021036 18 HPTVAASKS-KGNSITKIP--SNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVG-GRS 93 (318)
Q Consensus 18 ~~~~t~s~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g-~~d 93 (318)
..+++++.+ +.+++|++. +++....... .... ....++|+|++ ++|+++ ..+
T Consensus 50 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~s~dg------------------~~l~~~~~~~ 105 (343)
T 1ri6_A 50 RYLYVGVRPEFRVLAYRIAPDDGALTFAAES---ALPG---SLTHISTDHQG------------------QFVFVGSYNA 105 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCEEEEEEE---ECSS---CCSEEEECTTS------------------SEEEEEETTT
T ss_pred CEEEEeecCCCeEEEEEecCCCCceeecccc---ccCC---CCcEEEEcCCC------------------CEEEEEecCC
Confidence 335666655 999999987 4442211111 1111 23347777777 766555 458
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe-CCCcEEEEECCC-cceee
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS-SDGSVRIWDGYI-QELQK 171 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~-~d~~v~iwd~~~-~~~~~ 171 (318)
+.|.+|++.++.. .+....+..+ ..+.+++| ++++++|++++ .++.|.+||+.+ ++...
T Consensus 106 ~~i~~~d~~~~~~-----------~~~~~~~~~~-~~~~~~~~-------s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 106 GNVSVTRLEDGLP-----------VGVVDVVEGL-DGCHSANI-------SPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp TEEEEEEEETTEE-----------EEEEEEECCC-TTBCCCEE-------CTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred CeEEEEECCCCcc-----------ccccccccCC-CCceEEEE-------CCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 8999999953221 2344444443 45889999 89998888877 899999999987 54332
Q ss_pred ee--cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEE-eCCCcEEEeeeccCCCeeeEeeeeec----c--c
Q 021036 172 SA--EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG-KGSGSFDLWKCDISCNKFDKVGSYNA----H--D 242 (318)
Q Consensus 172 ~~--~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~~~----h--~ 242 (318)
.. ... ......+..++|+ |+++.++++ ..++.|.+|+++..+++......... + .
T Consensus 167 ~~~~~~~-----------~~~~~~~~~~~~~-----pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 167 QDPAEVT-----------TVEGAGPRHMVFH-----PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp EEEEEEE-----------CSTTCCEEEEEEC-----TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred ecccccc-----------cCCCCCcceEEEC-----CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 11 000 0112356789999 999866555 48899999976554554333333321 1 2
Q ss_pred CceeEEEEcCCCCEEE-EecCCCcEEEEEec--CCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 243 QVVTGLAWAFDGCCLY-SCSQDNFVRSWIFH--GNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 243 ~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
..+..++|+|+|++|+ ++..++.|.+||+. ++....+...+. + ..+.+++|+|+|++|+++.
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~------------~-~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT------------E-TQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC------------S-SSCCCEEECTTSSEEEEEC
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC------------C-CccceEEECCCCCEEEEec
Confidence 3566899999998776 55689999999998 333332221111 1 1367899999999877653
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=6.3e-18 Score=143.39 Aligned_cols=225 Identities=10% Similarity=-0.021 Sum_probs=155.3
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccc--cccccceeeeecccccCCCCcccccccCCCCCccEEEEec--C
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASR--SAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG--R 92 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~--~ 92 (318)
....++...++.+.+||..+++.+..+........ ........++|+|++ +++++++ .
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg------------------~~l~~~~~~~ 162 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT------------------NTVYISGIGK 162 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT------------------TEEEEEEESS
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC------------------CEEEEEecCC
Confidence 33456667789999999998877655543211000 000112346777776 7666654 5
Q ss_pred CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeee
Q 021036 93 SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKS 172 (318)
Q Consensus 93 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 172 (318)
++.|.+||.++++ .+..+..+...+.++.| ++++++|++++.++.|.+||..+++....
T Consensus 163 ~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 163 ESVIWVVDGGNIK--------------LKTAIQNTGKMSTGLAL-------DSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp SCEEEEEETTTTE--------------EEEEECCCCTTCCCCEE-------ETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCCCc--------------eEEEecCCCCccceEEE-------CCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 8899999998753 44555545566888999 89999999999999999999999887766
Q ss_pred ecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC-CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEc
Q 021036 173 AEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG-SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWA 251 (318)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 251 (318)
+..... .+...+..++|+ |+++.+++++. ++.|.+| |..+++ .+..+.... ...++|+
T Consensus 222 ~~~~~~----------~~~~~~~~~~~s-----~dg~~l~~~~~~~~~v~~~--d~~~~~--~~~~~~~~~--~~~~~~s 280 (353)
T 3vgz_A 222 KKLLDD----------GKEHFFINISLD-----TARQRAFITDSKAAEVLVV--DTRNGN--ILAKVAAPE--SLAVLFN 280 (353)
T ss_dssp EECCCS----------SSCCCEEEEEEE-----TTTTEEEEEESSSSEEEEE--ETTTCC--EEEEEECSS--CCCEEEE
T ss_pred EEcCCC----------CCCcccceEEEC-----CCCCEEEEEeCCCCEEEEE--ECCCCc--EEEEEEcCC--CceEEEC
Confidence 543211 123356789999 89987766654 5899999 555655 344444322 2579999
Q ss_pred CCCCEEE-EecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 252 FDGCCLY-SCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 252 ~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
|+|++++ +...++.|.+||+.+++........ ..+.+++|+|||++|+++
T Consensus 281 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~---------------~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 281 PARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP---------------THPNSLALSADGKTLYVS 331 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTTEEEEEEECC---------------SEEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCeEEEEEecC---------------CCCCeEEEcCCCCEEEEE
Confidence 9999554 4557899999999887765433222 256899999999966654
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=1.3e-17 Score=141.39 Aligned_cols=229 Identities=16% Similarity=0.131 Sum_probs=144.3
Q ss_pred eEEeeC---CCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEec-CCCc
Q 021036 20 TVAASK---SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG-RSGK 95 (318)
Q Consensus 20 ~~t~s~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~-~dg~ 95 (318)
+++++. ++.+.+||+.+++....... ..+... ...++|+|++ ++|++++ .++.
T Consensus 53 l~~~~~~~~~~~v~~~~~~~g~~~~~~~~--~~~~~~---p~~~a~spdg------------------~~l~~~~~~~~~ 109 (347)
T 3hfq_A 53 LYSVDKEDDEGGIAAWQIDGQTAHKLNTV--VAPGTP---PAYVAVDEAR------------------QLVYSANYHKGT 109 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTEEEEEEEE--EEESCC---CSEEEEETTT------------------TEEEEEETTTTE
T ss_pred EEEEEecCCCceEEEEEecCCcEEEeeee--ecCCCC---CEEEEECCCC------------------CEEEEEeCCCCE
Confidence 555554 68999999976543111110 011111 2336777776 8777776 7899
Q ss_pred EEEEEccCCccccccccccCCceeEEeeecc---------ccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECC-
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQA---------HNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGY- 165 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~- 165 (318)
|.+|++..... ...+..+.. +...+.+++| +++|+++++...++.|.+|++.
T Consensus 110 v~v~~~~~~g~-----------~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 110 AEVMKIAADGA-----------LTLTDTVQHSGHGPRPEQDGSHIHYTDL-------TPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEEEEECTTSC-----------EEEEEEEECCCCCSSTTCSSCCEEEEEE-------CTTSCEEEEETTTTEEEEEEECT
T ss_pred EEEEEeCCCCC-----------eeecceeecCCCCCCccccCCCceEEEE-------CCCCcEEEEeCCCCEEEEEEECC
Confidence 99999963211 222222221 2235889999 8999966666778999999998
Q ss_pred CcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEE-EeCCCcEEEeeeccCCCeeeEeeeeeccc--
Q 021036 166 IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAV-GKGSGSFDLWKCDISCNKFDKVGSYNAHD-- 242 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~~~h~-- 242 (318)
+++........ ......+..++|+ |+|+++++ +..++.|.+|+++..+++...+..+....
T Consensus 172 ~g~~~~~~~~~-----------~~~g~~p~~~~~s-----pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 235 (347)
T 3hfq_A 172 AGQLSEQSVLT-----------MEAGFGPRHLVFS-----PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD 235 (347)
T ss_dssp TSCEEEEEEEE-----------CCTTCCEEEEEEC-----TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT
T ss_pred CCcEEEeeeEE-----------cCCCCCCceEEEC-----CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC
Confidence 44332211100 0112246679999 99985555 56788999998776566654554444332
Q ss_pred ----CceeEEEEcCCCCEE-EEecCCCcEEEEEecC-CceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 243 ----QVVTGLAWAFDGCCL-YSCSQDNFVRSWIFHG-NSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 243 ----~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
..+..++|+|+|++| ++...++.|.+|++.. +....+...+ .+...+.+++|+|||++|+++
T Consensus 236 ~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~------------~~~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 236 YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS------------TEGDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE------------CSSSCCCEEEECTTSSEEEEE
T ss_pred CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe------------cCCCCcCeEEECCCCCEEEEE
Confidence 347889999999977 5556789999999963 2222221111 112256899999999988776
Q ss_pred e
Q 021036 317 Q 317 (318)
Q Consensus 317 ~ 317 (318)
.
T Consensus 304 ~ 304 (347)
T 3hfq_A 304 N 304 (347)
T ss_dssp E
T ss_pred E
Confidence 3
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=4.1e-19 Score=165.22 Aligned_cols=227 Identities=8% Similarity=-0.066 Sum_probs=149.8
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC------
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS------ 93 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d------ 93 (318)
++..+.|+++++||+.+++....+.... .....+..++|+|++ ++|++++.+
T Consensus 30 ~~~~~~dg~i~~~d~~~g~~~~~~~~~~----~~~~~v~~~~~SpDg------------------~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 30 FIYREQKGTVRLWNVETNTSTVLIEGKK----IESLRAIRYEISPDR------------------EYALFSYNVEPIYQH 87 (723)
T ss_dssp BCCCCSSSCEEEBCGGGCCCEEEECTTT----TTTTTCSEEEECTTS------------------SEEEEEESCCCCSSS
T ss_pred EEEEeCCCCEEEEECCCCcEEEEecccc----ccccccceEEECCCC------------------CEEEEEecCccceee
Confidence 4455789999999999987654443211 110123447777776 888888764
Q ss_pred ---CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCccee
Q 021036 94 ---GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 94 ---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
+.+.+||+.+++. +.+.....|...+..++| +|+|++|+.++. +.|++||+.+++..
T Consensus 88 ~~~~~i~~~d~~~~~~------------~~l~~~~~~~~~~~~~~~-------SPdG~~la~~~~-~~i~~~~~~~g~~~ 147 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDP------------QSLDPPEVSNAKLQYAGW-------GPKGQQLIFIFE-NNIYYCAHVGKQAI 147 (723)
T ss_dssp CCCSEEEEEESSSCCC------------EECCCTTCCSCCCSBCCB-------CSSTTCEEEEET-TEEEEESSSSSCCE
T ss_pred cceeeEEEEECCCCce------------EeccCCccccccccccEE-------CCCCCEEEEEEC-CeEEEEECCCCceE
Confidence 7888999998652 223333455566889999 999999999886 79999999988765
Q ss_pred eeecccccccccceeeeeec---------ccceeEEEEeeccCCCCceEEEEEeCCC-----------------------
Q 021036 171 KSAEAHCVPFSLLKEVVTVN---------TVPISVLSLILPVQSPRLMLLAVGKGSG----------------------- 218 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~---------~~~v~~l~~~~~~~~~~~~~l~~~~~dg----------------------- 218 (318)
.....+.... +..+. ...+..++|+ |||+.|++++.++
T Consensus 148 ~~~~~~~~~~-----~~~g~~~~v~~ee~~~~~~~~~~S-----pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (723)
T 1xfd_A 148 RVVSTGKEGV-----IYNGLSDWLYEEEILKTHIAHWWS-----PDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (723)
T ss_dssp EEECCCBTTT-----EEEEECCHHHHHTTSSSSEEEEEC-----TTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred EEecCCCCCc-----eECcccceeEEEEeccCcceEEEC-----CCCCEEEEEEECCCccceEEeeccCCcCCCcceecc
Confidence 5443322100 00000 1133789999 9999999887543
Q ss_pred -----------cEEEeeeccCCCeeeEeeeeec------ccCceeEEEEcCCCCEEEEecC----CCcEEEEEecCCcee
Q 021036 219 -----------SFDLWKCDISCNKFDKVGSYNA------HDQVVTGLAWAFDGCCLYSCSQ----DNFVRSWIFHGNSLS 277 (318)
Q Consensus 219 -----------~i~vw~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~~~~ 277 (318)
.|++| +..+++ ....+.. +...+..++|+|||+++++.+. +..|++||+.+++..
T Consensus 218 ~~~~G~~~~~~~l~~~--d~~~~~--~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 218 YPKAGSENPSISLHVI--GLNGPT--HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp CCBTTSCCCEEEEEEE--ESSSSC--CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred CCCCCCCCCeeEEEEE--ECCCCc--eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 67788 454544 1223333 3567899999999998876643 367999999887765
Q ss_pred eeecCCCCCCccccccCCCcceee----eEEEEcCCCcEEEE
Q 021036 278 QVSIPTNTPGLQSCTDLPDAFVSC----LGMAVSPGNLVVAM 315 (318)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~h~~~v----~~v~~sp~~~~l~~ 315 (318)
.+...... ..+ ..++|+|||+.|+.
T Consensus 294 ~~~~~~~~-------------~~~~~~~~~~~~spdg~~l~~ 322 (723)
T 1xfd_A 294 KKHEDESE-------------AWLHRQNEEPVFSKDGRKFFF 322 (723)
T ss_dssp EEEEEECS-------------SCCCCCCCCCEECTTSCSEEE
T ss_pred EEEEeccC-------------CEEeccCCCceEcCCCCeEEE
Confidence 43211100 122 37899999997764
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=7e-18 Score=142.04 Aligned_cols=213 Identities=13% Similarity=0.038 Sum_probs=144.7
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccE-EEEecCCCcEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSI-LAVGGRSGKVS 97 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~-l~~g~~dg~i~ 97 (318)
.+++++.++.+++||+.+++.+..+.... ... ....++|+|++ +. ++++..++.|.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~--~~~~~~~s~dg------------------~~l~v~~~~~~~v~ 59 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIAD---AGP--TPMVPMVAPGG------------------RIAYATVNKSESLV 59 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTT---CTT--CCCCEEECTTS------------------SEEEEEETTTTEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCC---CCC--CccceEEcCCC------------------CEEEEEeCCCCeEE
Confidence 47889999999999999887655544211 000 02237777776 55 56667789999
Q ss_pred EEEccCCccccccccccCCceeEEeeecc-----ccccEEEEEeeeecCCCCCCCcEEEEEe------------CCCcEE
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLFQA-----HNSWITSISLAVLSSDSSNPQVLLVTGS------------SDGSVR 160 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~~~~~~~l~s~~------------~d~~v~ 160 (318)
+||+.+++. +..+.. |...+.+++| +++|++|+++. .++.|.
T Consensus 60 ~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 60 KIDLVTGET--------------LGRIDLSTPEERVKSLFGAAL-------SPDGKTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp EEETTTCCE--------------EEEEECCBTTEEEECTTCEEE-------CTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred EEECCCCCe--------------EeeEEcCCcccccccccceEE-------CCCCCEEEEEecccccccccccccCceEE
Confidence 999988652 233321 1235678999 89998888886 579999
Q ss_pred EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe-----
Q 021036 161 IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV----- 235 (318)
Q Consensus 161 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~----- 235 (318)
+||+.+++....+.... .+..++|+ |+++.++++ ++.|++|| ..+++....
T Consensus 119 v~d~~~~~~~~~~~~~~---------------~~~~~~~s-----~dg~~l~~~--~~~i~~~d--~~~~~~~~~~~~~~ 174 (337)
T 1pby_B 119 LYDAETLSRRKAFEAPR---------------QITMLAWA-----RDGSKLYGL--GRDLHVMD--PEAGTLVEDKPIQS 174 (337)
T ss_dssp EEETTTTEEEEEEECCS---------------SCCCEEEC-----TTSSCEEEE--SSSEEEEE--TTTTEEEEEECSTT
T ss_pred EEECCCCcEEEEEeCCC---------------CcceeEEC-----CCCCEEEEe--CCeEEEEE--CCCCcEeeeeeccc
Confidence 99999887665554321 45677888 888877777 57888884 333331100
Q ss_pred -----------------------------------------------------------eeeecccCceeEEEEcCCCCE
Q 021036 236 -----------------------------------------------------------GSYNAHDQVVTGLAWAFDGCC 256 (318)
Q Consensus 236 -----------------------------------------------------------~~~~~h~~~v~~~~~~~~~~~ 256 (318)
..+..+...+.+++|+|+|++
T Consensus 175 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 254 (337)
T 1pby_B 175 WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR 254 (337)
T ss_dssp TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCE
Confidence 001122234567899999998
Q ss_pred EEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 257 LYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 257 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
++++ ++.|.+||+.+++......... .+.+++|+|||++|+++
T Consensus 255 l~~~--~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASIKRVPLPH---------------SYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEECSS---------------CCCEEEECTTSCEEEEE
T ss_pred EEEe--CCeEEEEECCCCcCcceecCCC---------------ceeeEEECCCCCEEEEE
Confidence 8887 7899999998876544322221 45799999999988765
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=1.7e-17 Score=148.93 Aligned_cols=204 Identities=13% Similarity=0.056 Sum_probs=145.8
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
...+++++.|++|.+||..+++++..+.... . +..++++|++ ++|++++.|+.|
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~---~-----~~~v~~spdg------------------~~l~v~~~d~~V 202 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGY---A-----VHISRMSASG------------------RYLLVIGRDARI 202 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECST---T-----EEEEEECTTS------------------CEEEEEETTSEE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCc---c-----cceEEECCCC------------------CEEEEECCCCeE
Confidence 3457888999999999999998766654311 1 2236677776 999999999999
Q ss_pred EEEEc--cCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC----CCcEEEEEeC-CCcEEEEECCCcce
Q 021036 97 SLWRI--CVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN----PQVLLVTGSS-DGSVRIWDGYIQEL 169 (318)
Q Consensus 97 ~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~----~~~~l~s~~~-d~~v~iwd~~~~~~ 169 (318)
++||+ .++ +.+..+.. ...+..++| ++ +|++|++++. +++|.+||..++++
T Consensus 203 ~v~D~~~~t~--------------~~~~~i~~-g~~p~~va~-------sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 203 DMIDLWAKEP--------------TKVAEIKI-GIEARSVES-------SKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEETTSSSC--------------EEEEEEEC-CSEEEEEEE-------CCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred EEEECcCCCC--------------cEEEEEec-CCCcceEEe-------CCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 99999 663 34555653 456799999 88 9999998885 89999999999988
Q ss_pred eeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEE
Q 021036 170 QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGL 248 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 248 (318)
+..+......... ........+..+.++ |++ .++++...++.|.+||+ .+.+...+..+ .+...+..+
T Consensus 261 ~~~i~~~g~~~~~---~~~~~~~~v~~i~~s-----~~~~~~~vs~~~~g~i~vvd~--~~~~~l~~~~i-~~~~~~~~~ 329 (543)
T 1nir_A 261 KQIVSTRGMTVDT---QTYHPEPRVAAIIAS-----HEHPEFIVNVKETGKVLLVNY--KDIDNLTVTSI-GAAPFLHDG 329 (543)
T ss_dssp EEEEECCEECSSS---CCEESCCCEEEEEEC-----SSSSEEEEEETTTTEEEEEEC--TTSSSCEEEEE-ECCSSCCCE
T ss_pred ceeecccCcccCc---cccccCCceEEEEEC-----CCCCEEEEEECCCCeEEEEEe--cCCCcceeEEe-ccCcCccCc
Confidence 8877643211000 000112267888998 754 56677778999999954 34332122233 356678899
Q ss_pred EEcCCCCEEEE-ecCCCcEEEEEecCCceeee
Q 021036 249 AWAFDGCCLYS-CSQDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 249 ~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~~~ 279 (318)
.|+|+|+++++ +..+++|.+||+.++++...
T Consensus 330 ~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 330 GWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred eECCCCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 99999997665 45689999999999876543
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=4.9e-17 Score=137.88 Aligned_cols=205 Identities=8% Similarity=-0.011 Sum_probs=145.4
Q ss_pred CCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCcc-EEEEecCCCcEEEEEccCC
Q 021036 26 SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFS-ILAVGGRSGKVSLWRICVP 104 (318)
Q Consensus 26 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~-~l~~g~~dg~i~iw~~~~~ 104 (318)
++.+.+||..+++.+..+.... . ...++|+|++ + ++++...++.|.+||.+++
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~-----~---~~~~~~s~dg------------------~~l~v~~~~~~~v~~~d~~~~ 121 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL-----K---PFGATINNTT------------------QTLWFGNTVNSAVTAIDAKTG 121 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-----C---CCSEEEETTT------------------TEEEEEETTTTEEEEEETTTC
T ss_pred CccEEEEcCCCCeEEEEEecCC-----C---cceEEECCCC------------------CEEEEEecCCCEEEEEeCCCC
Confidence 6789999999887655554311 1 2237788877 6 5566677899999999986
Q ss_pred ccccccccccCCceeEEeeeccccc---------cEEEEEeeeecCCCCCCCcEEEEEe--CCCcEEEEECCCcceeeee
Q 021036 105 KCYSVEDCKVPTTAVLIGLFQAHNS---------WITSISLAVLSSDSSNPQVLLVTGS--SDGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~ 173 (318)
+ .+..+..+.. .+.++.| +++++++++++ .++.|.+||..+++....+
T Consensus 122 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 122 E--------------VKGRLVLDDRKRTEEVRPLQPRELVA-------DDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp C--------------EEEEEESCCCCCCSSCCCCEEEEEEE-------ETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred e--------------eEEEEecCCCccccccCCCCCceEEE-------CCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 5 3334433321 2788999 88888777766 4789999999988877665
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec----ccCceeEEE
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA----HDQVVTGLA 249 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----h~~~v~~~~ 249 (318)
.... ..+..++|+ |+++.+++++.++.|.+| |..+++ .+..+.. +...+..++
T Consensus 181 ~~~~--------------~~~~~~~~s-----~dg~~l~~~~~~~~i~~~--d~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 181 QNTG--------------KMSTGLALD-----SEGKRLYTTNADGELITI--DTADNK--ILSRKKLLDDGKEHFFINIS 237 (353)
T ss_dssp CCCC--------------TTCCCCEEE-----TTTTEEEEECTTSEEEEE--ETTTTE--EEEEEECCCSSSCCCEEEEE
T ss_pred cCCC--------------CccceEEEC-----CCCCEEEEEcCCCeEEEE--ECCCCe--EEEEEEcCCCCCCcccceEE
Confidence 5222 146778999 999999999999999999 566665 3333332 455678899
Q ss_pred EcCCCCEEEEec-CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 250 WAFDGCCLYSCS-QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 250 ~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
|+|+|++++.++ .++.|.+||+.+++.......+. ...++|+|+|++++++
T Consensus 238 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----------------~~~~~~s~dg~~l~v~ 289 (353)
T 3vgz_A 238 LDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----------------SLAVLFNPARNEAYVT 289 (353)
T ss_dssp EETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----------------CCCEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----------------CceEEECCCCCEEEEE
Confidence 999999766655 45999999998876554332221 1578999999865543
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=4.4e-18 Score=158.74 Aligned_cols=255 Identities=9% Similarity=-0.056 Sum_probs=156.2
Q ss_pred CccceEEeeC-CC-----ceeEeecCCCCCCCceecchhccccccccceeeeecccccCC---C---CcccccccCCCCC
Q 021036 16 NTHPTVAASK-SK-----GNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLS---S---KKYPVPQNGSSNW 83 (318)
Q Consensus 16 ~~~~~~t~s~-d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~---~---~~~~v~~~~~s~~ 83 (318)
+...+++++. |+ ++++||+.+++..+.+........+..+ +...... . ....+.++++||+
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETL-------SDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC---------------------------CCEESCCCEECTT
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccc-------cchhhhhhhhhhhccccCcceeEECCC
Confidence 3455777777 88 8999999998765544432211000000 0000000 0 0123555666666
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD 163 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd 163 (318)
|++|++++. +.|++||+.++.. .....+..|...+..++| +|+|++|+.++ ++.|++||
T Consensus 120 g~~l~~~~~-~~i~~~d~~~~~~------------~~~~~l~~~~~~~~~~~~-------SPDG~~la~~~-~~~i~~~d 178 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDLKQEGK------------AAVRQLTHGEGFATDAKL-------SPKGGFVSFIR-GRNLWVID 178 (741)
T ss_dssp SSEEEEEET-TEEEEEESSSCST------------TSCCBCCCSSSCEEEEEE-------CTTSSEEEEEE-TTEEEEEE
T ss_pred CCEEEEEeC-CcEEEEECCCCCc------------ceEEEcccCCcccccccC-------CCCCCEEEEEe-CCcEEEEe
Confidence 699998876 9999999987510 012345667788999999 99999999887 46999999
Q ss_pred CCCcceeeeeccccccccc-c-eeeeeecccceeEEEEeeccCCCCceEEEEEeCCC-----------------------
Q 021036 164 GYIQELQKSAEAHCVPFSL-L-KEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG----------------------- 218 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg----------------------- 218 (318)
+.+++.......+...+.. . ..+.......+..+.|+ |||+.|++++.|+
T Consensus 179 ~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S-----pDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 179 LASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA-----PDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp TTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC-----TTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred cCCCCEEEeccCCccceeccccceeeeeccccccceEEC-----CCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 9987655433322110000 0 00000001124778999 9999999987665
Q ss_pred ----------cEEEeeeccCC-CeeeEeeeeecccCceeEEEEcCCCCEEEEecC-----CCcEEEEEecCCceeeeecC
Q 021036 219 ----------SFDLWKCDISC-NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ-----DNFVRSWIFHGNSLSQVSIP 282 (318)
Q Consensus 219 ----------~i~vw~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~ 282 (318)
.|++| +..+ ++...+.....|...+..++| |||++|++++. +..|++||+.++....+...
T Consensus 254 ~~~g~~~~~~~l~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 254 PAAGDANVQVKLGVI--SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp CBTTSCCCEEEEEEE--CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred CCCCCCCCeeEEEEE--ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence 56666 6656 553232221247778999999 99998887653 57899999988776544322
Q ss_pred CCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 283 TNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 283 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.... ....+..++|+|||++++++
T Consensus 331 ~~~~----------~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 331 TSPT----------WVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp ECSS----------CCCCCSCCEECTTSCEEEEE
T ss_pred CCCC----------cCCcCCceEECCCCeEEEEe
Confidence 1110 00134688999999987765
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.79 E-value=2.8e-17 Score=152.55 Aligned_cols=173 Identities=14% Similarity=0.185 Sum_probs=119.4
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC-----cEEEEECCC
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG-----SVRIWDGYI 166 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~ 166 (318)
.+..|++||+.+++. ..+.....|...+.+++| +++|++|++++.++ .|++||+.+
T Consensus 233 ~~~~l~~~d~~~~~~------------~~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 233 HHVTVGIYHLATGKT------------VYLQTGEPKEKFLTNLSW-------SPDENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp CEEEEEEEETTTTEE------------EECCCCSCTTCEEEEEEE-------CTTSSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CeeEEEEEECCCCce------------EeeccCCCCceeEeeEEE-------ECCCCEEEEEEeCCCCCeeEEEEEECCC
Confidence 446799999987542 112112356778999999 99999999988776 999999998
Q ss_pred cceeeeecccccccccceeeeeecccceeEEEEeeccCCC--CceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCc
Q 021036 167 QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP--RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQV 244 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~ 244 (318)
++....+..... ......+..++|+ | +|+++++++.++.+++|.++.... .+..+..|...
T Consensus 294 g~~~~~~~~~~~---------~~~~~~~~~~~~s-----p~~dg~~l~~~~~~g~~~l~~~~~~~~---~~~~l~~~~~~ 356 (706)
T 2z3z_A 294 GRFVRTLFVETD---------KHYVEPLHPLTFL-----PGSNNQFIWQSRRDGWNHLYLYDTTGR---LIRQVTKGEWE 356 (706)
T ss_dssp CCEEEEEEEEEC---------SSCCCCCSCCEEC-----TTCSSEEEEEECTTSSCEEEEEETTSC---EEEECCCSSSC
T ss_pred CceeeEEEEccC---------CCeECccCCceee-----cCCCCEEEEEEccCCccEEEEEECCCC---EEEecCCCCeE
Confidence 843333221110 0000124567898 9 999999999999999998775444 34556667777
Q ss_pred eeE-EEEcCCCCEEEEec-CCC----cEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 245 VTG-LAWAFDGCCLYSCS-QDN----FVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 245 v~~-~~~~~~~~~l~s~~-~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+.. ++|+|+|+.|+.++ .++ .|..||+.++....+. |...+.+++|+|||++|+..
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~----------------~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT----------------PESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC----------------CSSSEEEEEECTTSSEEEEE
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc----------------CCCceEEEEECCCCCEEEEE
Confidence 876 79999998776554 444 5666676665544332 12367899999999988764
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.79 E-value=1.9e-17 Score=160.01 Aligned_cols=181 Identities=9% Similarity=-0.007 Sum_probs=142.8
Q ss_pred ccccccCCC-CCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccc-cEEEEEeeeecCCCCCCCcEE
Q 021036 73 YPVPQNGSS-NWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS-WITSISLAVLSSDSSNPQVLL 150 (318)
Q Consensus 73 ~~v~~~~~s-~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~l 150 (318)
..+.++.++ |+|++|++++ ++.|.+|+..+++ ...+..|.. .+..++| + +|+.|
T Consensus 296 ~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~---------------~~~~~~~~~~~~~~~~~-------s-dg~~l 351 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY---------------VLKVPEPLRIRYVRRGG-------D-TKVAF 351 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB---------------EEECSCCSCEEEEEECS-------S-SEEEE
T ss_pred cccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc---------------eEEccCCCcceEEeeeE-------c-CCCeE
Confidence 368899999 9999998887 7899999998643 223556777 8999999 8 99999
Q ss_pred EEEeCCCcEE-EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC
Q 021036 151 VTGSSDGSVR-IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 151 ~s~~~d~~v~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 229 (318)
++++.++.+. +||+.+++..... . +...+..++|+ |+|+.|++++.++.|++| +..+
T Consensus 352 ~~~s~~~~l~~~~d~~~~~~~~l~-~--------------~~~~~~~~~~S-----pDG~~la~~~~~~~v~~~--d~~t 409 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGKAEKFE-E--------------NLGNVFAMGVD-----RNGKFAVVANDRFEIMTV--DLET 409 (1045)
T ss_dssp EEEETTEEEEEEEETTTCCEEECC-C--------------CCCSEEEEEEC-----TTSSEEEEEETTSEEEEE--ETTT
T ss_pred EEEECCCceEEEEECCCCCceEec-C--------------CccceeeeEEC-----CCCCEEEEECCCCeEEEE--ECCC
Confidence 9999888888 9998876543222 2 23478899999 999999999999999999 5566
Q ss_pred CeeeEeeeeecccCceeEEEEcCCCCEEEEecCCC----------cEEEEEecCCceeeeecCCCCCCccccccCCCcce
Q 021036 230 NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN----------FVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFV 299 (318)
Q Consensus 230 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 299 (318)
++ ......+|...+..++|+|||++|++++.++ .|++||+.++....+.. |..
T Consensus 410 g~--~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~---------------~~~ 472 (1045)
T 1k32_A 410 GK--PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT---------------ENS 472 (1045)
T ss_dssp CC--EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC---------------SSS
T ss_pred Cc--eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC---------------CCc
Confidence 65 3334457888999999999999998887654 89999998876443332 334
Q ss_pred eeeEEEEcCCCcEEEEE
Q 021036 300 SCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 300 ~v~~v~~sp~~~~l~~~ 316 (318)
.+..++|+|||++|+.+
T Consensus 473 ~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp BEEEEEECTTSCEEEEE
T ss_pred ccCCceEcCCCCEEEEE
Confidence 67889999999988765
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=7.2e-17 Score=136.58 Aligned_cols=216 Identities=7% Similarity=-0.019 Sum_probs=144.6
Q ss_pred CCccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccE-EEEecCC
Q 021036 15 SNTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSI-LAVGGRS 93 (318)
Q Consensus 15 ~~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~-l~~g~~d 93 (318)
.+...+++++.+++|.+||+.+++.+..+.... ... ...++|+|++ ++ ++++..+
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~---~~~~~~s~dg------------------~~~~v~~~~~ 64 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD---KFG---PGTAMMAPDN------------------RTAYVLNNHY 64 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSS---CCS---SCEEEECTTS------------------SEEEEEETTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC---CCC---CceeEECCCC------------------CEEEEEeCCC
Confidence 455668899999999999999887655554321 001 2237777776 64 4566778
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeecc-c-----cccEEEEEeeeecCCCCCCCcEEEEEeCC-----------
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA-H-----NSWITSISLAVLSSDSSNPQVLLVTGSSD----------- 156 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-h-----~~~v~~~~~~p~~~~~~~~~~~l~s~~~d----------- 156 (318)
+.|.+||..+++ .+..+.. + ...+..++| +++|++|++++.+
T Consensus 65 ~~i~~~d~~t~~--------------~~~~~~~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 65 GDIYGIDLDTCK--------------NTFHANLSSVPGEVGRSMYSFAI-------SPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp TEEEEEETTTTE--------------EEEEEESCCSTTEEEECSSCEEE-------CTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CcEEEEeCCCCc--------------EEEEEEcccccccccccccceEE-------CCCCCEEEEEcccccccccccccC
Confidence 999999998854 3333332 1 233778999 8999999998865
Q ss_pred -CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe
Q 021036 157 -GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 157 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 235 (318)
+.|.+||+.+++....+.... +...+.+++|+ |+++ +++++. .|++| |..+++. +
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~~~s-----~dg~-l~~~~~--~i~~~--d~~~~~~--~ 179 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP------------MPRQVYLMRAA-----DDGS-LYVAGP--DIYKM--DVKTGKY--T 179 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE------------CCSSCCCEEEC-----TTSC-EEEESS--SEEEE--CTTTCCE--E
T ss_pred CCeEEEEECCCccccceeeecc------------CCCcccceeEC-----CCCc-EEEccC--cEEEE--eCCCCce--e
Confidence 899999998865433221111 12257788898 9999 555543 48998 5545442 2
Q ss_pred eeeecc--------------------------------------------------------------------cCceeE
Q 021036 236 GSYNAH--------------------------------------------------------------------DQVVTG 247 (318)
Q Consensus 236 ~~~~~h--------------------------------------------------------------------~~~v~~ 247 (318)
..+..+ ...+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (349)
T 1jmx_B 180 VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFT 259 (349)
T ss_dssp EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEE
T ss_pred ccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCccee
Confidence 222111 124557
Q ss_pred EEEcC-CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 248 LAWAF-DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 248 ~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
++|+| ++++++++ ++.|.+||+.+++......... .+.+++|+|||++|+++
T Consensus 260 ~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 260 GLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH---------------TYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp EEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS---------------CCCEEEECSSSSCEEEE
T ss_pred eEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC---------------CccceEECCCCCEEEEe
Confidence 78889 99988888 8899999998877654332221 35789999999877764
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=1.6e-16 Score=134.76 Aligned_cols=229 Identities=12% Similarity=0.103 Sum_probs=140.2
Q ss_pred eCCCceeEeecCC--CCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEec--CCCcEEEE
Q 021036 24 SKSKGNSITKIPS--NCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG--RSGKVSLW 99 (318)
Q Consensus 24 s~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~--~dg~i~iw 99 (318)
+.++.+.+|++.. ++... +.. ..+... ...++|+|++ ++++++. .++.|.+|
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~-~~~--~~~~~~---p~~~a~spdg------------------~l~~~~~~~~~~~v~~~ 68 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTN-DGL--LAATQN---PTYLALSAKD------------------CLYSVDKEDDEGGIAAW 68 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEE-EEE--EEECSC---CCCEEECTTC------------------EEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEEcCCCCeEEE-eee--eeccCC---cceEEEccCC------------------eEEEEEecCCCceEEEE
Confidence 4567788887654 33221 111 111111 2337777776 7444443 26899999
Q ss_pred EccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe-CCCcEEEEECCC-cce--eeeecc
Q 021036 100 RICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS-SDGSVRIWDGYI-QEL--QKSAEA 175 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~-~d~~v~iwd~~~-~~~--~~~~~~ 175 (318)
++.+++ .+.+..+..+...+..++| +++|++|++++ .++.|.+|++.. +.. +..+..
T Consensus 69 ~~~~g~------------~~~~~~~~~~~~~p~~~a~-------spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~ 129 (347)
T 3hfq_A 69 QIDGQT------------AHKLNTVVAPGTPPAYVAV-------DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH 129 (347)
T ss_dssp EEETTE------------EEEEEEEEEESCCCSEEEE-------ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred EecCCc------------EEEeeeeecCCCCCEEEEE-------CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec
Confidence 997654 3345555567778899999 89999888887 679999999963 222 111111
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecc-cCceeEEEEcCCC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAH-DQVVTGLAWAFDG 254 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~ 254 (318)
..... ........+.+++|+ |+|+++++...++.|++|+++. +++...+..+..+ ...+..++|+|+|
T Consensus 130 ~~~~p-----~~~~~~~~~~~~~~s-----pdg~l~v~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 130 SGHGP-----RPEQDGSHIHYTDLT-----PDNRLAVIDLGSDKVYVYNVSD-AGQLSEQSVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp CCCCS-----STTCSSCCEEEEEEC-----TTSCEEEEETTTTEEEEEEECT-TSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred CCCCC-----CccccCCCceEEEEC-----CCCcEEEEeCCCCEEEEEEECC-CCcEEEeeeEEcCCCCCCceEEECCCC
Confidence 00000 000112247789999 9999777777788999997652 3443343333332 2367889999999
Q ss_pred CEEEE-ecCCCcEEEEEecC--Cceeee---ecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 255 CCLYS-CSQDNFVRSWIFHG--NSLSQV---SIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 255 ~~l~s-~~~d~~v~iwd~~~--~~~~~~---~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+++++ +..++.|.+|++.. +..... ...+.. ......+..++|+|||++|++
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~i~~spdG~~l~v 256 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD---------YTAHNGAAAIRLSHDGHFLYV 256 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT---------CCSCCEEEEEEECTTSCEEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC---------CCCCCcceeEEECCCCCEEEE
Confidence 96555 56788999999874 443221 111110 001136789999999998754
No 147
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=1.1e-16 Score=143.72 Aligned_cols=179 Identities=8% Similarity=-0.055 Sum_probs=134.6
Q ss_pred CCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCc
Q 021036 79 GSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGS 158 (318)
Q Consensus 79 ~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~ 158 (318)
.+++++.++++++.|++|.+||..+++ .+..+..+.. +..++| +++|++|++++.|++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~--------------~~~~i~~g~~-~~~v~~-------spdg~~l~v~~~d~~ 201 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK--------------IVKVIDTGYA-VHISRM-------SASGRYLLVIGRDAR 201 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC--------------EEEEEECSTT-EEEEEE-------CTTSCEEEEEETTSE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce--------------EEEEEecCcc-cceEEE-------CCCCCEEEEECCCCe
Confidence 366777999999999999999999854 4556663333 899999 999999999999999
Q ss_pred EEEEEC--CCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC----CceEEEEEe-CCCcEEEeeeccCCCe
Q 021036 159 VRIWDG--YIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP----RLMLLAVGK-GSGSFDLWKCDISCNK 231 (318)
Q Consensus 159 v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~----~~~~l~~~~-~dg~i~vw~~~~~~~~ 231 (318)
|.+||+ .+++.+..+.... .+..++|+ | +|+++++++ .+++|.+| |..+.+
T Consensus 202 V~v~D~~~~t~~~~~~i~~g~---------------~p~~va~s-----p~~~~dg~~l~v~~~~~~~v~v~--D~~t~~ 259 (543)
T 1nir_A 202 IDMIDLWAKEPTKVAEIKIGI---------------EARSVESS-----KFKGYEDRYTIAGAYWPPQFAIM--DGETLE 259 (543)
T ss_dssp EEEEETTSSSCEEEEEEECCS---------------EEEEEEEC-----CSTTCTTTEEEEEEEESSEEEEE--ETTTCC
T ss_pred EEEEECcCCCCcEEEEEecCC---------------CcceEEeC-----CCcCCCCCEEEEEEccCCeEEEE--eccccc
Confidence 999999 7777666654322 56889999 9 999999988 58999999 555655
Q ss_pred eeEeeeeec----------ccC-ceeEEEEcCCCC-EEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcce
Q 021036 232 FDKVGSYNA----------HDQ-VVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFV 299 (318)
Q Consensus 232 ~~~~~~~~~----------h~~-~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 299 (318)
++..+.. |.. .+.++.++|++. ++++...++.|.+||+.+.........+ +..
T Consensus 260 --~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-------------~~~ 324 (543)
T 1nir_A 260 --PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-------------AAP 324 (543)
T ss_dssp --EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-------------CCS
T ss_pred --cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-------------cCc
Confidence 4444432 323 688999999766 6677888999999999875432211101 112
Q ss_pred eeeEEEEcCCCcEEEEE
Q 021036 300 SCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 300 ~v~~v~~sp~~~~l~~~ 316 (318)
.+.+++|+|||++++++
T Consensus 325 ~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 325 FLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp SCCCEEECTTSCEEEEE
T ss_pred CccCceECCCCCEEEEE
Confidence 56789999999987654
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.76 E-value=4.9e-16 Score=130.69 Aligned_cols=229 Identities=11% Similarity=0.024 Sum_probs=141.0
Q ss_pred cceEEeeCCCceeEeecCCCCC-CCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCC--
Q 021036 18 HPTVAASKSKGNSITKIPSNCC-LPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSG-- 94 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg-- 94 (318)
...+++..++.+.+||..+++. ...+.. .... ..+++|+|++ ++|+++..++
T Consensus 53 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~---~~~~~~s~dg------------------~~l~~~~~~~~~ 107 (331)
T 3u4y_A 53 NVVVTSDFCQTLVQIETQLEPPKVVAIQE----GQSS---MADVDITPDD------------------QFAVTVTGLNHP 107 (331)
T ss_dssp EEEEEESTTCEEEEEECSSSSCEEEEEEE----CSSC---CCCEEECTTS------------------SEEEECCCSSSS
T ss_pred EEEEEeCCCCeEEEEECCCCceeEEeccc----CCCC---ccceEECCCC------------------CEEEEecCCCCc
Confidence 3445555588999999988765 222221 1111 1125666666 8888665553
Q ss_pred -cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEE-EeCCCc-EEEEECCCcceee
Q 021036 95 -KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVT-GSSDGS-VRIWDGYIQELQK 171 (318)
Q Consensus 95 -~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s-~~~d~~-v~iwd~~~~~~~~ 171 (318)
.|.+||+++++ .+..+.. .....+++| +++|++|++ ...++. |.+|++.....+.
T Consensus 108 ~~i~v~d~~~~~--------------~~~~~~~-~~~~~~~~~-------spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 108 FNMQSYSFLKNK--------------FISTIPI-PYDAVGIAI-------SPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEEEEETTTTE--------------EEEEEEC-CTTEEEEEE-------CTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ccEEEEECCCCC--------------eEEEEEC-CCCccceEE-------CCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 89999998854 3344443 345689999 899975554 455688 9999998644332
Q ss_pred eecccccccccceeeeeecccceeEEEEeeccCCCCceEEEE-EeCCCcEEEeeeccCCCee-eEeeeeecccCceeEEE
Q 021036 172 SAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAV-GKGSGSFDLWKCDISCNKF-DKVGSYNAHDQVVTGLA 249 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~-~~~dg~i~vw~~~~~~~~~-~~~~~~~~h~~~v~~~~ 249 (318)
... .. . .........++|+ |+|+.+++ +..++.|++|+ ..+++. ..+..+.. ...+..++
T Consensus 166 ~~~-~~--------~-~~~~~~~~~~~~s-----pdg~~l~v~~~~~~~v~v~d--~~~~~~~~~~~~~~~-~~~~~~~~ 227 (331)
T 3u4y_A 166 DTG-QE--------F-ISGGTRPFNITFT-----PDGNFAFVANLIGNSIGILE--TQNPENITLLNAVGT-NNLPGTIV 227 (331)
T ss_dssp EEE-EE--------E-ECSSSSEEEEEEC-----TTSSEEEEEETTTTEEEEEE--CSSTTSCEEEEEEEC-SSCCCCEE
T ss_pred ecC-Cc--------c-ccCCCCccceEEC-----CCCCEEEEEeCCCCeEEEEE--CCCCcccceeeeccC-CCCCceEE
Confidence 211 00 0 0122356889999 99985554 55789999995 444442 12445543 45678999
Q ss_pred EcCCCCEEEEe-cCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 250 WAFDGCCLYSC-SQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 250 ~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
|+|+|++++.+ ..++.|.+||+.+++...+........+. .........++|+|||++|+++
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLID-----PRPLFGANQMALNKTETKLFIS 290 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCC-----CGGGTTCCCEEECTTSSEEEEE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccC-----CCCcccccceEECCCCCEEEEe
Confidence 99999976554 45788999999887763322111100000 0001122568999999987654
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.75 E-value=4.9e-17 Score=150.85 Aligned_cols=244 Identities=10% Similarity=0.037 Sum_probs=145.1
Q ss_pred cceEEeeCCCceeEeecCCCCC--CCceecchhccccccccceeeeecccccC-CCCcccccccCCCCCccEEEEecCCC
Q 021036 18 HPTVAASKSKGNSITKIPSNCC--LPLITADQYASRSAMLHSLAVAWSPVLRL-SSKKYPVPQNGSSNWFSILAVGGRSG 94 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~w~p~~~~-~~~~~~v~~~~~s~~~~~l~~g~~dg 94 (318)
..+++++.|+ | +||+.+++. ...+....... ..++...+ ..+...|.++++|+++.++++ .++
T Consensus 36 ~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~----------~l~~~~~~~~~~~~~v~~~~~spd~~~~~~--~~~ 101 (706)
T 2z3z_A 36 DNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNA----------LMPEGCKFQTTDAFPSFRTLDAGRGLVVLF--TQG 101 (706)
T ss_dssp TEEEEEETTE-E-EEEC-------CEEEEHHHHHT----------TC-----------CCCEEEEETTTTEEEEE--ETT
T ss_pred CeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhh----------hccchhccccccccCceeEEECCCCeEEEE--ECC
Confidence 3467777777 8 999999887 33332211100 00000000 011234555566666244444 359
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC-----cce
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-----QEL 169 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~-----~~~ 169 (318)
.|++||+.+++ . ..+..+...+.+++| +|+|++|+++ .|+.|++||+.+ ++.
T Consensus 102 ~i~~~d~~~~~--------------~-~~l~~~~~~~~~~~~-------SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 102 GLVGFDMLARK--------------V-TYLFDTNEETASLDF-------SPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp EEEEEETTTTE--------------E-EEEECCTTCCTTCEE-------CTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred EEEEEECCCCc--------------e-EEccCCcccccCCcC-------CCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 99999998754 2 233445677889999 9999999985 689999999988 765
Q ss_pred eeeeccccccc-ccceeeeeecccceeEEEEeeccCCCCceEEEEEe---------------------------------
Q 021036 170 QKSAEAHCVPF-SLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK--------------------------------- 215 (318)
Q Consensus 170 ~~~~~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~--------------------------------- 215 (318)
..........+ .-.. +...+...+.++.|+ |||+.|++++
T Consensus 159 ~~~~~~~~~~~~~g~~-~~~ee~~~~~~~~~S-----pDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQA-VHQREFGIEKGTFWS-----PKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp EESCSCCBTTEEESSC-CGGGCTTCCCSEEEC-----TTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred EEeccCCCCCeEcccc-hhhhhcCCCceEEEC-----CCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 54332221100 0000 000011235788999 9999999987
Q ss_pred CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCC-----cEEEEEecCC-ceeeeecCCCCCCcc
Q 021036 216 GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN-----FVRSWIFHGN-SLSQVSIPTNTPGLQ 289 (318)
Q Consensus 216 ~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~-~~~~~~~~~~~~~~~ 289 (318)
.+..|++| +..+++...+.....|...+..++|+|||++|++++.++ .|++||+.++ ....+.......
T Consensus 233 ~~~~l~~~--d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~--- 307 (706)
T 2z3z_A 233 HHVTVGIY--HLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH--- 307 (706)
T ss_dssp CEEEEEEE--ETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS---
T ss_pred CeeEEEEE--ECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC---
Confidence 34567777 666666433332235677899999999999999887775 8999999887 444332111100
Q ss_pred ccccCCCcceeeeEEEEcC--CCcEEEEE
Q 021036 290 SCTDLPDAFVSCLGMAVSP--GNLVVAMV 316 (318)
Q Consensus 290 ~~~~~~~h~~~v~~v~~sp--~~~~l~~~ 316 (318)
....+.+++|+| ||++++++
T Consensus 308 -------~~~~~~~~~~sp~~dg~~l~~~ 329 (706)
T 2z3z_A 308 -------YVEPLHPLTFLPGSNNQFIWQS 329 (706)
T ss_dssp -------CCCCCSCCEECTTCSSEEEEEE
T ss_pred -------eECccCCceeecCCCCEEEEEE
Confidence 011346789999 99988876
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.75 E-value=6.2e-17 Score=150.97 Aligned_cols=180 Identities=9% Similarity=-0.007 Sum_probs=127.4
Q ss_pred cCCCCCccEEEEecC-CC-----cEEEEEccCCccccccccccCCceeEEeeecccc-----------------------
Q 021036 78 NGSSNWFSILAVGGR-SG-----KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN----------------------- 128 (318)
Q Consensus 78 ~~~s~~~~~l~~g~~-dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~----------------------- 128 (318)
+++|++|++|++++. |+ .|++||+.+++.. ..+..+.
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR--------------LLVDSKVVLPGTETLSDEEKARRERQRIAA 107 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE--------------EEECGGGTC--------------------C
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee--------------Eccchhhcccccccccchhhhhhhhhhhcc
Confidence 333333499999888 88 8999999986532 2222221
Q ss_pred -ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcc--eeeeecccccccccceeeeeecccceeEEEEeeccCC
Q 021036 129 -SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205 (318)
Q Consensus 129 -~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 205 (318)
..|.+++| +++|++|++++. +.|++||+.++. ....+.. +...+..++|+
T Consensus 108 ~~~v~~~~~-------SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~--------------~~~~~~~~~~S----- 160 (741)
T 2ecf_A 108 MTGIVDYQW-------SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH--------------GEGFATDAKLS----- 160 (741)
T ss_dssp CEESCCCEE-------CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC--------------SSSCEEEEEEC-----
T ss_pred ccCcceeEE-------CCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc--------------CCcccccccCC-----
Confidence 34789999 999999999987 999999998872 2222222 23468899999
Q ss_pred CCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCc----------------eeEEEEcCCCCEEEEecCCC-----
Q 021036 206 PRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQV----------------VTGLAWAFDGCCLYSCSQDN----- 264 (318)
Q Consensus 206 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~----------------v~~~~~~~~~~~l~s~~~d~----- 264 (318)
|||+.|+.++ ++.|++| +..+++...+ ...+... +..++|+|||++|++++.|+
T Consensus 161 PDG~~la~~~-~~~i~~~--d~~~g~~~~~--~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 161 PKGGFVSFIR-GRNLWVI--DLASGRQMQL--TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPV 235 (741)
T ss_dssp TTSSEEEEEE-TTEEEEE--ETTTTEEEEC--CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCE
T ss_pred CCCCEEEEEe-CCcEEEE--ecCCCCEEEe--ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCce
Confidence 9999999988 5689999 5556553222 2222221 47899999999999987765
Q ss_pred ----------------------------cEEEEEecC-CceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 265 ----------------------------FVRSWIFHG-NSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 265 ----------------------------~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.|++||+.+ +....+... ..|...+..++| |||++|++
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~~-pDg~~l~~ 302 (741)
T 2ecf_A 236 QKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLG------------KEQDIYLARVNW-RDPQHLSF 302 (741)
T ss_dssp EEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCC------------SCSSEEEEEEEE-EETTEEEE
T ss_pred EecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCC------------CCcceEEEEEEe-CCCCEEEE
Confidence 788888877 665543321 125568999999 99999886
Q ss_pred E
Q 021036 316 V 316 (318)
Q Consensus 316 ~ 316 (318)
+
T Consensus 303 ~ 303 (741)
T 2ecf_A 303 Q 303 (741)
T ss_dssp E
T ss_pred E
Confidence 4
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.75 E-value=2.4e-17 Score=153.35 Aligned_cols=187 Identities=11% Similarity=0.006 Sum_probs=127.6
Q ss_pred ccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccc---cEEEEEeeeecCCCCCCCcEEEEE
Q 021036 77 QNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS---WITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 77 ~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
++.|+++|+++++ +.||.|++||..+++ ....+..|.. .|.+++| +|+|++|+++
T Consensus 21 ~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------------~~~~~~~~~~~~~~v~~~~~-------SpDg~~l~~~ 78 (723)
T 1xfd_A 21 EAKWISDTEFIYR-EQKGTVRLWNVETNT--------------STVLIEGKKIESLRAIRYEI-------SPDREYALFS 78 (723)
T ss_dssp CCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------------CEEEECTTTTTTTTCSEEEE-------CTTSSEEEEE
T ss_pred ccEEcCCCcEEEE-eCCCCEEEEECCCCc--------------EEEEeccccccccccceEEE-------CCCCCEEEEE
Confidence 3344444487766 789999999999865 2344555554 4899999 9999999999
Q ss_pred eCC---------CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEee
Q 021036 154 SSD---------GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWK 224 (318)
Q Consensus 154 ~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~ 224 (318)
+.+ +.+.+||+.+++. ..+.... .+...+..++|+ |||+.|+.++. +.|++|
T Consensus 79 ~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~-----------~~~~~~~~~~~S-----PdG~~la~~~~-~~i~~~- 139 (723)
T 1xfd_A 79 YNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPE-----------VSNAKLQYAGWG-----PKGQQLIFIFE-NNIYYC- 139 (723)
T ss_dssp ESCCCCSSSCCCSEEEEEESSSCCC-EECCCTT-----------CCSCCCSBCCBC-----SSTTCEEEEET-TEEEEE-
T ss_pred ecCccceeecceeeEEEEECCCCce-EeccCCc-----------cccccccccEEC-----CCCCEEEEEEC-CeEEEE-
Confidence 875 7888999998875 2222111 122247788899 99999999885 789999
Q ss_pred eccCCCeeeEeeeeecccCc------------------eeEEEEcCCCCEEEEecCCC----------------------
Q 021036 225 CDISCNKFDKVGSYNAHDQV------------------VTGLAWAFDGCCLYSCSQDN---------------------- 264 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~h~~~------------------v~~~~~~~~~~~l~s~~~d~---------------------- 264 (318)
+..+++...+ ...+... +.+++|+|||++|++++.|+
T Consensus 140 -~~~~g~~~~~--~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (723)
T 1xfd_A 140 -AHVGKQAIRV--VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPY 216 (723)
T ss_dssp -SSSSSCCEEE--ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEE
T ss_pred -ECCCCceEEE--ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceec
Confidence 5555553222 2222222 37899999999999887553
Q ss_pred ------------cEEEEEecCCce-eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 265 ------------FVRSWIFHGNSL-SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 265 ------------~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.|++||+.++.. ..+.... ....+...+..++|+|||++|++.
T Consensus 217 ~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 217 HYPKAGSENPSISLHVIGLNGPTHDLEMMPPD---------DPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp ECCBTTSCCCEEEEEEEESSSSCCCEECCCCC---------CGGGSSEEEEEEEESSSSEEEEEE
T ss_pred cCCCCCCCCCeeEEEEEECCCCceeEEeeCCc---------cCCCccceeEEEEEeCCCeEEEEE
Confidence 678888877653 3222111 111234688999999999988654
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=1.2e-15 Score=130.46 Aligned_cols=178 Identities=12% Similarity=0.122 Sum_probs=115.9
Q ss_pred CCCcEEEEEccC-CccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCCCCCcEEEEEeC-CCcEEEEECC-Cc
Q 021036 92 RSGKVSLWRICV-PKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSSNPQVLLVTGSS-DGSVRIWDGY-IQ 167 (318)
Q Consensus 92 ~dg~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~-d~~v~iwd~~-~~ 167 (318)
.+|.+.+|++.. ++. ...+..+. .+...+.+++| +++|++|+++.. ++.|++||+. ++
T Consensus 117 ~~g~v~v~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~-------spdG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 117 FAGYGNVFSVSETGKL-----------EKNVQNYEYQENTGIHGMVF-------DPTETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp SCCEEEEEEECTTCCE-----------EEEEEEEECCTTCCEEEEEE-------CTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred CCceEEEEccCCCCcC-----------cceEeeEEeCCCCcceEEEE-------CCCCCEEEEEcCCCCEEEEEEECCCC
Confidence 689999999974 331 11122211 24567899999 999998887764 6899999998 66
Q ss_pred ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC-CCcEEEeeeccCCCeeeE----eeeee---
Q 021036 168 ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG-SGSFDLWKCDISCNKFDK----VGSYN--- 239 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~----~~~~~--- 239 (318)
+......... ..+...+..++|+ |+|+++++++. ++.|.+|+++..+++... +..+.
T Consensus 179 ~~~~~~~~~~----------~~~g~~p~~~~~s-----pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 179 EVELVGSVDA----------PDPGDHPRWVAMH-----PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp CEEEEEEEEC----------SSTTCCEEEEEEC-----TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CEEEeeeEec----------CCCCCCCCEeEEC-----CCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 5432111000 0013357889999 99998887764 789999987765555321 22221
Q ss_pred -cccC------ceeEEE-EcCCCCEEEEecCCC------cEEEEEec-CCceeee----ecCCCCCCccccccCCCccee
Q 021036 240 -AHDQ------VVTGLA-WAFDGCCLYSCSQDN------FVRSWIFH-GNSLSQV----SIPTNTPGLQSCTDLPDAFVS 300 (318)
Q Consensus 240 -~h~~------~v~~~~-~~~~~~~l~s~~~d~------~v~iwd~~-~~~~~~~----~~~~~~~~~~~~~~~~~h~~~ 300 (318)
+|.. .+..++ |+|+|++|++++.+. .|.+|++. ++.+..+ .... ..
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~---------------~~ 308 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT---------------SG 308 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS---------------CC
T ss_pred CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC---------------CC
Confidence 2222 578999 999999887765432 89999996 4554431 1111 13
Q ss_pred eeEEEEcC---CCcEEEEEe
Q 021036 301 CLGMAVSP---GNLVVAMVQ 317 (318)
Q Consensus 301 v~~v~~sp---~~~~l~~~~ 317 (318)
+..++|+| ||++|+++.
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp TTCCCEEECTTCTTEEEEEC
T ss_pred cccceecCCCcCCCEEEEEE
Confidence 46788999 899888763
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=2.7e-15 Score=127.91 Aligned_cols=174 Identities=13% Similarity=0.017 Sum_probs=114.0
Q ss_pred cccCCCCCccEEE-EecCCCcEEEEEccCCcc------ccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc
Q 021036 76 PQNGSSNWFSILA-VGGRSGKVSLWRICVPKC------YSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV 148 (318)
Q Consensus 76 ~~~~~s~~~~~l~-~g~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 148 (318)
.+++++|+|++|+ ++..++.|++|++..... +.. ..........+......++| +++|+
T Consensus 158 ~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~-------spdg~ 223 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLT-------KGTPEAFKVAPGSGPRHLIF-------NSDGK 223 (361)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE-------EEEEEEEECCTTCCEEEEEE-------CTTSS
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceee-------cccccceecCCCCCCeEEEE-------cCCCC
Confidence 4445555557554 455688999999875431 100 00001112233456789999 89999
Q ss_pred EEEEEe-CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC--CcEEEeee
Q 021036 149 LLVTGS-SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS--GSFDLWKC 225 (318)
Q Consensus 149 ~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d--g~i~vw~~ 225 (318)
++++++ .++.|.+||+.+++.......... ..+......++|+ |+|++|++++.+ +.|.+|++
T Consensus 224 ~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~---------~~~~~~~~~i~~s-----pdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 224 FAYLINEIGGTVIAFRYADGMLDEIQTVAAD---------TVNAQGSGDIHLS-----PDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp EEEEEETTTCEEEEEEEETTEEEEEEEEESC---------SSCCCCEEEEEEC-----TTSSEEEEEECSSSCEEEEEEE
T ss_pred EEEEEcCCCCeEEEEEecCCceEEeEEEecC---------CCCCCCcccEEEC-----CCCCEEEEECCCCCCEEEEEEE
Confidence 887777 689999999986643221111100 1112245789999 999988776654 89999987
Q ss_pred ccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEec-CCCcEEEEEec--CCceee
Q 021036 226 DISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCS-QDNFVRSWIFH--GNSLSQ 278 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~--~~~~~~ 278 (318)
+..+++...+..+.. ...+..++|+|+|++|++++ .++.|.+|++. ++++..
T Consensus 290 ~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 290 DETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp CTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred cCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 766666556666554 56788999999999888776 67899997664 555544
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=4.1e-15 Score=126.74 Aligned_cols=199 Identities=8% Similarity=0.043 Sum_probs=118.7
Q ss_pred cEEEEe-cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe-CCCcEEEE
Q 021036 85 SILAVG-GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS-SDGSVRIW 162 (318)
Q Consensus 85 ~~l~~g-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~-~d~~v~iw 162 (318)
++|+++ ..++.|.+|++.....+..........+.-......+...+.+++| +++|++|++++ .++.|.+|
T Consensus 110 ~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 110 KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI-------TPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE-------CTTSSEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE-------CCCCCEEEEEeCCCCEEEEE
Confidence 555555 4688999999975432210000000000000001112345688999 89998666655 58899999
Q ss_pred ECCCcce------eeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-CCCcEEEeeeccCCCeeeEe
Q 021036 163 DGYIQEL------QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 163 d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~ 235 (318)
++..... +... ... ..........+..++|+ |+|+++++++ .++.|.+|+++ +++...+
T Consensus 183 ~~~~~~~~~~~~~l~~~-~~~------~~~~~~~~~~~~~~~~s-----pdg~~l~v~~~~~~~v~v~~~~--~g~~~~~ 248 (361)
T 3scy_A 183 NINPNANADNKEKFLTK-GTP------EAFKVAPGSGPRHLIFN-----SDGKFAYLINEIGGTVIAFRYA--DGMLDEI 248 (361)
T ss_dssp EECTTCCTTTCCCCEEE-EEE------EEEECCTTCCEEEEEEC-----TTSSEEEEEETTTCEEEEEEEE--TTEEEEE
T ss_pred EEcCCCCcccccceeec-ccc------cceecCCCCCCeEEEEc-----CCCCEEEEEcCCCCeEEEEEec--CCceEEe
Confidence 9875432 1100 000 00001123356789999 9999887776 68999999655 5554444
Q ss_pred eeee---cccCceeEEEEcCCCCEEEEecC--CCcEEEEEec--CCceeeeecCCCCCCccccccCCCcceeeeEEEEcC
Q 021036 236 GSYN---AHDQVVTGLAWAFDGCCLYSCSQ--DNFVRSWIFH--GNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP 308 (318)
Q Consensus 236 ~~~~---~h~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 308 (318)
..+. .+...+..++|+|+|++|+++.. ++.|.+|++. ++....+...+.. ..+.+++|+|
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g-------------~~~~~~~~sp 315 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG-------------IHPRNFIITP 315 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS-------------SCCCEEEECT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC-------------CCCceEEECC
Confidence 4433 23345689999999998866655 4899999996 3443322211111 2567999999
Q ss_pred CCcEEEEEe
Q 021036 309 GNLVVAMVQ 317 (318)
Q Consensus 309 ~~~~l~~~~ 317 (318)
||++|+++.
T Consensus 316 dg~~l~~~~ 324 (361)
T 3scy_A 316 NGKYLLVAC 324 (361)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999888764
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=4.3e-17 Score=151.58 Aligned_cols=230 Identities=8% Similarity=-0.033 Sum_probs=145.1
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecC------
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGR------ 92 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~------ 92 (318)
.++..+.|+++++||+.+++....+..... ....+..++|+|++ ++|+.++.
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~SpDg------------------~~la~~~~~~~~~~ 85 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQSYTILSNRTM----KSVNASNYGLSPDR------------------QFVYLESDYSKLWR 85 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCEEEEECHHHH----HTTTCSEEEECTTS------------------SEEEEEEEEEECSS
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEccccc----cccceeeEEECCCC------------------CeEEEEecCceeEE
Confidence 466667899999999999886554443211 00123457888877 88888876
Q ss_pred ---CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce
Q 021036 93 ---SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL 169 (318)
Q Consensus 93 ---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 169 (318)
++.|++||+++++... ...+ ...+..++| +|+|+.|+.+. |+.|++||+.+++.
T Consensus 86 ~s~~~~i~~~d~~~g~~~~------------~~~l---~~~~~~~~~-------SPDG~~la~~~-~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 86 YSYTATYYIYDLSNGEFVR------------GNEL---PRPIQYLCW-------SPVGSKLAYVY-QNNIYLKQRPGDPP 142 (719)
T ss_dssp SCEEEEEEEEETTTTEECC------------SSCC---CSSBCCEEE-------CSSTTCEEEEE-TTEEEEESSTTSCC
T ss_pred eecceEEEEEECCCCcccc------------ceec---CcccccceE-------CCCCCEEEEEE-CCeEEEEeCCCCCc
Confidence 7899999999865210 0112 246888999 99999999886 78999999988766
Q ss_pred eeeecccccccccceeeeeecc---------cceeEEEEeeccCCCCceEEEEEeCCC----------------------
Q 021036 170 QKSAEAHCVPFSLLKEVVTVNT---------VPISVLSLILPVQSPRLMLLAVGKGSG---------------------- 218 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~---------~~v~~l~~~~~~~~~~~~~l~~~~~dg---------------------- 218 (318)
.......... .+..++. .....++|+ |||+.|++++.|.
T Consensus 143 ~~l~~~~~~~-----~v~~g~~~~v~~ee~~~~~~~~~wS-----PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 143 FQITFNGREN-----KIFNGIPDWVYEEEMLATKYALWWS-----PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EECCCCCBTT-----TEEESSCCHHHHHHTTCSSCCEEEC-----TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEecCCCcC-----CeEcccccceeeeecccCcccEEEC-----CCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence 5432111100 0011111 122578999 9999999987552
Q ss_pred ------------cEEEeeeccCCCeee---Ee---eeeecccCceeEEEEcCCCCEEEEecCC----CcEEEEE----ec
Q 021036 219 ------------SFDLWKCDISCNKFD---KV---GSYNAHDQVVTGLAWAFDGCCLYSCSQD----NFVRSWI----FH 272 (318)
Q Consensus 219 ------------~i~vw~~~~~~~~~~---~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd----~~ 272 (318)
.|++| +..+++.. .+ ..+.+|...+..++|+||++++++.... ..|.+|| +.
T Consensus 213 ~yp~~g~~~~~~~l~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFII--DTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp ECCBTTSCCCEEEEEEE--ESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS
T ss_pred cCCCCCCCCCeeEEEEE--ECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC
Confidence 66777 55554321 11 1234577889999999998777764322 2488889 66
Q ss_pred CCceeeeecCCCCCCccccccCCCcceeee-----EEEEcCCCcEEEE
Q 021036 273 GNSLSQVSIPTNTPGLQSCTDLPDAFVSCL-----GMAVSPGNLVVAM 315 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~v~~sp~~~~l~~ 315 (318)
++....+.... ..+|...+. .++|+|||+.|+.
T Consensus 291 ~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 291 TWDCPKTQEHI----------EESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp SEECCGGGEEE----------EECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred CCceEEEEecc----------cccCCceEccccCCccEECCCCCeEEE
Confidence 65544332100 001222344 7899999986543
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.71 E-value=3.2e-15 Score=144.51 Aligned_cols=198 Identities=11% Similarity=0.040 Sum_probs=146.5
Q ss_pred Ccc-cccccCCCCCccEEEEecCCCcEE-EEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc
Q 021036 71 KKY-PVPQNGSSNWFSILAVGGRSGKVS-LWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV 148 (318)
Q Consensus 71 ~~~-~v~~~~~s~~~~~l~~g~~dg~i~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 148 (318)
|.. .+..+.|+ +++.|+.++.++.+. +|+..+++ . ..+.+|...+..++| +++|+
T Consensus 335 ~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------------~-~~l~~~~~~~~~~~~-------SpDG~ 391 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------------A-EKFEENLGNVFAMGV-------DRNGK 391 (1045)
T ss_dssp CSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------------E-EECCCCCCSEEEEEE-------CTTSS
T ss_pred CCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------------c-eEecCCccceeeeEE-------CCCCC
Confidence 444 67888999 999999988888888 88988643 2 233477789999999 99999
Q ss_pred EEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC----------
Q 021036 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG---------- 218 (318)
Q Consensus 149 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg---------- 218 (318)
+|++++.++.|++||+.+++....... +...+..++|+ |+|++|++++.++
T Consensus 392 ~la~~~~~~~v~~~d~~tg~~~~~~~~--------------~~~~v~~~~~S-----pDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETGKPTVIERS--------------REAMITDFTIS-----DNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC--------------SSSCCCCEEEC-----TTSCEEEEEEEECSSTTCSCCEE
T ss_pred EEEEECCCCeEEEEECCCCceEEeccC--------------CCCCccceEEC-----CCCCeEEEEecCccccccCCCCC
Confidence 999999999999999998876655433 33477889999 9999998887654
Q ss_pred cEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCce--------eeeecCCCCCC---
Q 021036 219 SFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL--------SQVSIPTNTPG--- 287 (318)
Q Consensus 219 ~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--------~~~~~~~~~~~--- 287 (318)
.|++| +..+++ +..+..|...+..++|+|+|++|++++.++...+|+...... ..+...+....
T Consensus 453 ~i~l~--d~~~g~---~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1045)
T 1k32_A 453 AIHVY--DMEGRK---IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK 527 (1045)
T ss_dssp EEEEE--ETTTTE---EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGG
T ss_pred eEEEE--ECCCCc---EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccc
Confidence 89999 555554 445667888889999999999999999988888887653222 11111111110
Q ss_pred --------------cc----ccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 288 --------------LQ----SCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 288 --------------~~----~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+. ....+..|.+.+..++++|||+++++
T Consensus 528 ~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~ 573 (1045)
T 1k32_A 528 LVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYS 573 (1045)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEE
T ss_pred cCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEE
Confidence 11 11234457788999999999987774
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.71 E-value=4.8e-15 Score=124.61 Aligned_cols=205 Identities=12% Similarity=0.022 Sum_probs=139.0
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhc-cccccccceeeeecccccCCCCcccccccCCCCCccEEEEec---
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYA-SRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGG--- 91 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~--- 91 (318)
.....++++.++.+.+||+.+++.+..+...... +... ...++|+|++ ++|+++.
T Consensus 45 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg------------------~~l~~~~~~~ 103 (337)
T 1pby_B 45 GRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS---LFGAALSPDG------------------KTLAIYESPV 103 (337)
T ss_dssp SSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC---TTCEEECTTS------------------SEEEEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccc---ccceEECCCC------------------CEEEEEeccc
Confidence 3344567777899999999988765544431100 0111 2236666666 8888875
Q ss_pred ---------CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEE
Q 021036 92 ---------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIW 162 (318)
Q Consensus 92 ---------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iw 162 (318)
.++.|.+||..+++ .+..+.. ...+.++.| ++++++|+++ ++.|.+|
T Consensus 104 ~~~~~~~~~~~~~i~v~d~~~~~--------------~~~~~~~-~~~~~~~~~-------s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 104 RLELTHFEVQPTRVALYDAETLS--------------RRKAFEA-PRQITMLAW-------ARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp EECSSCEEECCCEEEEEETTTTE--------------EEEEEEC-CSSCCCEEE-------CTTSSCEEEE--SSSEEEE
T ss_pred ccccccccccCceEEEEECCCCc--------------EEEEEeC-CCCcceeEE-------CCCCCEEEEe--CCeEEEE
Confidence 57999999998754 3344433 345788899 8999988887 6899999
Q ss_pred ECCCcceeeeecccc--ccc--ccc-------------------------------------e-----------eeeeec
Q 021036 163 DGYIQELQKSAEAHC--VPF--SLL-------------------------------------K-----------EVVTVN 190 (318)
Q Consensus 163 d~~~~~~~~~~~~~~--~~~--~~~-------------------------------------~-----------~~~~~~ 190 (318)
|+.+++....+.... .+. ... . .....+
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 999887765554332 110 000 0 001122
Q ss_pred ccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEE
Q 021036 191 TVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWI 270 (318)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 270 (318)
...+..++|+ |++++++++ ++.|++| +..+++ .+..+.. ...+.+++|+|+|++|++++.++.|.+||
T Consensus 240 ~~~~~~~~~s-----~dg~~l~~~--~~~v~~~--d~~~~~--~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 240 DVFYFSTAVN-----PAKTRAFGA--YNVLESF--DLEKNA--SIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp SSCEEEEEEC-----TTSSEEEEE--ESEEEEE--ETTTTE--EEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred CCceeeEEEC-----CCCCEEEEe--CCeEEEE--ECCCCc--CcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 2345678898 999999888 7899999 555665 3444442 34678999999999999889999999999
Q ss_pred ecCCcee
Q 021036 271 FHGNSLS 277 (318)
Q Consensus 271 ~~~~~~~ 277 (318)
+.+++..
T Consensus 308 ~~~~~~~ 314 (337)
T 1pby_B 308 AETLEKK 314 (337)
T ss_dssp TTTCCEE
T ss_pred CcCCcEE
Confidence 9887654
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.68 E-value=2.4e-16 Score=146.55 Aligned_cols=177 Identities=14% Similarity=0.081 Sum_probs=122.6
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccc---cEEEEEeeeecCCCCCCCcEEEEEeC-----
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS---WITSISLAVLSSDSSNPQVLLVTGSS----- 155 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~p~~~~~~~~~~~l~s~~~----- 155 (318)
+++++++ .|+.|++||+.+++ ....+..|.. .+.+++| +|+|++|++++.
T Consensus 27 g~~~~~~-~d~~i~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~-------SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 27 QEYLHQS-ADNNIVLYNIETGQ--------------SYTILSNRTMKSVNASNYGL-------SPDRQFVYLESDYSKLW 84 (719)
T ss_dssp SEEEEEC-TTSCEEEEESSSCC--------------EEEEECHHHHHTTTCSEEEE-------CTTSSEEEEEEEEEECS
T ss_pred CeEEEEc-CCCCEEEEEcCCCc--------------EEEEEccccccccceeeEEE-------CCCCCeEEEEecCceeE
Confidence 3766665 59999999999865 3334444433 4899999 999999998876
Q ss_pred ----CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCe
Q 021036 156 ----DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNK 231 (318)
Q Consensus 156 ----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 231 (318)
++.|++||+.+++....... ...+..++|+ |||+.|+.+. ++.|++| +..+++
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l---------------~~~~~~~~~S-----PDG~~la~~~-~~~i~~~--~~~~g~ 141 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL---------------PRPIQYLCWS-----PVGSKLAYVY-QNNIYLK--QRPGDP 141 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC---------------CSSBCCEEEC-----SSTTCEEEEE-TTEEEEE--SSTTSC
T ss_pred EeecceEEEEEECCCCccccceec---------------CcccccceEC-----CCCCEEEEEE-CCeEEEE--eCCCCC
Confidence 78999999998875211111 1257789999 9999999986 7899999 555554
Q ss_pred eeEeeeeecccCce-----------------eEEEEcCCCCEEEEecCCC------------------------------
Q 021036 232 FDKVGSYNAHDQVV-----------------TGLAWAFDGCCLYSCSQDN------------------------------ 264 (318)
Q Consensus 232 ~~~~~~~~~h~~~v-----------------~~~~~~~~~~~l~s~~~d~------------------------------ 264 (318)
...+. ..++...| .+++|+|||++|++++.|.
T Consensus 142 ~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 142 PFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred cEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 22221 12222222 4899999999999887652
Q ss_pred ----cEEEEEecCCcee---eeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 265 ----FVRSWIFHGNSLS---QVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 265 ----~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.|++||+.++... .+.. + ..+.+|...+.+++|+||++++++
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPV-P--------AMIASSDYYFSWLTWVTDERVCLQ 269 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCC-C--------HHHHTSCEEEEEEEESSSSEEEEE
T ss_pred CCeeEEEEEECCCCCccceeEccC-C--------ccCCCCcceEEEeEEeCCCeEEEE
Confidence 6788888776542 1110 0 112346678999999999987776
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.67 E-value=4.2e-14 Score=120.77 Aligned_cols=187 Identities=11% Similarity=0.032 Sum_probs=119.6
Q ss_pred cEEEEecCCCcEEEEEcc-CCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcE--EEEEe-------
Q 021036 85 SILAVGGRSGKVSLWRIC-VPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVL--LVTGS------- 154 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~--l~s~~------- 154 (318)
++|++++.+ .|.+|++. +++. ..+.....+ +....++| +++|++ ++++.
T Consensus 52 ~~l~~~~~~-~v~~~~~~~~g~~------------~~~~~~~~~-g~~~~~~~-------spdg~~l~~~~~~~~~~~~~ 110 (365)
T 1jof_A 52 KNIYGAAMK-KWSSFAVKSPTEI------------VHEASHPIG-GHPRANDA-------DTNTRAIFLLAAKQPPYAVY 110 (365)
T ss_dssp SEEEEEEBT-EEEEEEEEETTEE------------EEEEEEECC-SSGGGGCT-------TSCCEEEEEEECSSTTCCEE
T ss_pred CEEEEEccc-eEEEEEECCCCCE------------EEeeEeecC-CCCccEEE-------CCCCCEEEEEEecCCcceec
Confidence 888888877 99999997 5432 111111111 22445788 899984 45553
Q ss_pred ------CCCcEEEEECC-CcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-CCCcEEEeeec
Q 021036 155 ------SDGSVRIWDGY-IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCD 226 (318)
Q Consensus 155 ------~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~ 226 (318)
.++++.+|++. .++....+.... ..+...+..++|+ |+|+++++++ .++.|++|+++
T Consensus 111 ~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~s-----pdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 111 ANPFYKFAGYGNVFSVSETGKLEKNVQNYE----------YQENTGIHGMVFD-----PTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp EEEESSSCCEEEEEEECTTCCEEEEEEEEE----------CCTTCCEEEEEEC-----TTSSEEEEEETTTTEEEEEEEC
T ss_pred cceeecCCceEEEEccCCCCcCcceEeeEE----------eCCCCcceEEEEC-----CCCCEEEEEcCCCCEEEEEEEC
Confidence 68999999997 455433322100 0123367899999 9999888776 46799999654
Q ss_pred cCCCeeeEeeeee--cccCceeEEEEcCCCCEEEEecC-CCcEEEEEec--CCcee----eeecCCCCCCccccccCCCc
Q 021036 227 ISCNKFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQ-DNFVRSWIFH--GNSLS----QVSIPTNTPGLQSCTDLPDA 297 (318)
Q Consensus 227 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~--~~~~~----~~~~~~~~~~~~~~~~~~~h 297 (318)
. +++...+..+. .|...+..++|+|+|+++++++. ++.|.+|++. ++.+. .+...+. ...+|
T Consensus 176 ~-~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~--------~~~g~ 246 (365)
T 1jof_A 176 A-SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP--------GIPDR 246 (365)
T ss_dssp T-TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT--------TCCCB
T ss_pred C-CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC--------CcCCc
Confidence 2 45543444443 24567899999999998877764 6899999876 34432 1221111 11122
Q ss_pred ce------eeeEEE-EcCCCcEEEEE
Q 021036 298 FV------SCLGMA-VSPGNLVVAMV 316 (318)
Q Consensus 298 ~~------~v~~v~-~sp~~~~l~~~ 316 (318)
.. .+..++ |+|||++|+++
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred ccccccccccccEEEECCCCCEEEEE
Confidence 22 578999 99999988764
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.66 E-value=2.7e-15 Score=136.11 Aligned_cols=176 Identities=11% Similarity=0.000 Sum_probs=115.9
Q ss_pred ccccCCCCCccEEEEecC-CCcEEEEEccCCccccccccccCCceeEEeeecccc-ccEEEEEeeeecCCCCCCCcEEEE
Q 021036 75 VPQNGSSNWFSILAVGGR-SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN-SWITSISLAVLSSDSSNPQVLLVT 152 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~l~s 152 (318)
|.++.+++||+.||.++. ||+++||++++++ . +.+..|. ..+..+.| +++ +++++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~--------------~-~~lt~~~~~~~~~~~~-------spd-~~l~~ 80 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE--------------T-VKLNREPINSVLDPHY-------GVG-RVILV 80 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTE--------------E-EECCSSCCSEECEECT-------TCS-EEEEE
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCC--------------c-EeeecccccccccccC-------CCC-eEEEE
Confidence 444444444599998876 9999999986643 2 3344444 68999999 788 78887
Q ss_pred EeC---CCcEEEEECCC--cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCce--EEEEEeCCCcEEEeee
Q 021036 153 GSS---DGSVRIWDGYI--QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLM--LLAVGKGSGSFDLWKC 225 (318)
Q Consensus 153 ~~~---d~~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~l~~~~~dg~i~vw~~ 225 (318)
++. +....+|.+.. ......+.... .+...+|+ |+|+ .+++++ ++.+.+|+
T Consensus 81 ~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~---------------~~~~~~~s-----~dg~~~~~~s~~-~~~~~l~d- 138 (582)
T 3o4h_A 81 RDVSKGAEQHALFKVNTSRPGEEQRLEAVK---------------PMRILSGV-----DTGEAVVFTGAT-EDRVALYA- 138 (582)
T ss_dssp EECSTTSCCEEEEEEETTSTTCCEECTTSC---------------SBEEEEEE-----ECSSCEEEEEEC-SSCEEEEE-
T ss_pred eccCCCCcceEEEEEeccCCCccccccCCC---------------CceeeeeC-----CCCCeEEEEecC-CCCceEEE-
Confidence 775 45566665433 21111222111 23355777 6664 444444 45556994
Q ss_pred ccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC----CcEEEEEecCCceeeeecCCCCCCccccccCCCcceee
Q 021036 226 DISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD----NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSC 301 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 301 (318)
+.+++.+.+ ..+.. .+++|+|||++|++++.| +.|++||+.++....+..+ ...+
T Consensus 139 -~~~g~~~~l---~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~---------------~~~~ 197 (582)
T 3o4h_A 139 -LDGGGLREL---ARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG---------------EGSF 197 (582)
T ss_dssp -EETTEEEEE---EEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS---------------SCEE
T ss_pred -ccCCcEEEe---ecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC---------------CCcc
Confidence 456653332 22333 789999999999988777 7899999988877655333 3478
Q ss_pred eEEEEcCCCcEEEEE
Q 021036 302 LGMAVSPGNLVVAMV 316 (318)
Q Consensus 302 ~~v~~sp~~~~l~~~ 316 (318)
..++|+|||++|+++
T Consensus 198 ~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 198 SSASISPGMKVTAGL 212 (582)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred ccceECCCCCEEEEc
Confidence 999999999999865
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=4.1e-15 Score=138.73 Aligned_cols=192 Identities=8% Similarity=-0.053 Sum_probs=124.9
Q ss_pred CCceeEeecCCCCCCCceecchhccccccccc--eeeeecccccCCCCcccccccCCCCCccEEEEecCC---------C
Q 021036 26 SKGNSITKIPSNCCLPLITADQYASRSAMLHS--LAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS---------G 94 (318)
Q Consensus 26 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d---------g 94 (318)
|++|++||+.++++...+...... ...+ ..+.|+|++ ++|+.++.+ +
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Spdg------------------~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFD----EFGHSINDYSISPDG------------------QFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTT----TCCSCCCEEEECTTS------------------SEEEEEEEEEECSSSCEEE
T ss_pred CCcEEEEECCCCceEEEEechhhh----hhcccccceEECCCC------------------CEEEEEECCeeeEEEccce
Confidence 999999999999875554432211 1111 125666666 888888776 5
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
.+.+||+++++. ..+..|...+..++| +|+|+.|+.+. |+.|++|++.+++......
T Consensus 93 ~~~~~d~~~~~~---------------~~l~~~~~~~~~~~~-------SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 93 SYDIYDLNKRQL---------------ITEERIPNNTQWVTW-------SPVGHKLAYVW-NNDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp EEEEEETTTTEE---------------CCSSCCCTTEEEEEE-------CSSTTCEEEEE-TTEEEEESSTTSCCEECCS
T ss_pred EEEEEECCCCcE---------------EEcccCCCcceeeEE-------CCCCCEEEEEE-CCeEEEEECCCCceEEEcC
Confidence 667999998642 345667788999999 99999998884 6899999998876543221
Q ss_pred -ccccccccceeeeeecc---------cceeEEEEeeccCCCCceEEEEEeCCC--------------------------
Q 021036 175 -AHCVPFSLLKEVVTVNT---------VPISVLSLILPVQSPRLMLLAVGKGSG-------------------------- 218 (318)
Q Consensus 175 -~~~~~~~~~~~~~~~~~---------~~v~~l~~~~~~~~~~~~~l~~~~~dg-------------------------- 218 (318)
++.. ....++. .....+.|+ |||+.||.++.|.
T Consensus 150 ~g~~~------~~~~g~~~~v~~ee~~~~~~~~~wS-----pDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y 218 (740)
T 4a5s_A 150 TGKED------IIYNGITDWVYEEEVFSAYSALWWS-----PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY 218 (740)
T ss_dssp CCBTT------TEEESBCCHHHHHHTSSSSBCEEEC-----TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred CCCcc------ceecCcccccccchhcCCCcceEEC-----CCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence 1110 0001111 122457898 9999998875332
Q ss_pred ----------cEEEeeeccCC---C---eeeEeee---eecccCceeEEEEcCCCCEEEEec----CCCcEEEEEecCCc
Q 021036 219 ----------SFDLWKCDISC---N---KFDKVGS---YNAHDQVVTGLAWAFDGCCLYSCS----QDNFVRSWIFHGNS 275 (318)
Q Consensus 219 ----------~i~vw~~~~~~---~---~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~----~d~~v~iwd~~~~~ 275 (318)
.|++| ++.+ + +...+.. +.+|...+..++|+|||+.++... .+..|++||+.++.
T Consensus 219 p~~G~~~~~~~l~v~--d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 219 PKAGAVNPTVKFFVV--NTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CBTTSCCCEEEEEEE--ETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCcCcCCeeEEEEE--ECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 35556 4444 4 2111111 013677789999999999665542 34479999998876
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.65 E-value=1.5e-14 Score=131.20 Aligned_cols=162 Identities=9% Similarity=-0.043 Sum_probs=118.0
Q ss_pred EEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC----CcEEE
Q 021036 86 ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD----GSVRI 161 (318)
Q Consensus 86 ~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d----~~v~i 161 (318)
.+++.+.++.+.+||+++++. .+ +..+.. .++.| +|+|++|++++.| +.|++
T Consensus 124 ~~~~s~~~~~~~l~d~~~g~~--------------~~-l~~~~~--~~~~~-------spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 124 VVFTGATEDRVALYALDGGGL--------------RE-LARLPG--FGFVS-------DIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp EEEEEECSSCEEEEEEETTEE--------------EE-EEEESS--CEEEE-------EEETTEEEEEEEEETTEEEEEE
T ss_pred EEEEecCCCCceEEEccCCcE--------------EE-eecCCC--ceEEE-------CCCCCEEEEEEEcCCCCeEEEE
Confidence 344444445556999988642 22 222222 78899 8999999988877 78999
Q ss_pred EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC--cEEEeeeccCCCeeeEeeeee
Q 021036 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG--SFDLWKCDISCNKFDKVGSYN 239 (318)
Q Consensus 162 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~ 239 (318)
||+.+++.. .+.. +...+..++|+ |||+.|+++..++ .|++| +..+++. . .+.
T Consensus 180 ~d~~~g~~~-~l~~--------------~~~~~~~~~~S-----pDG~~l~~~~~~~~~~i~~~--d~~~~~~--~-~~~ 234 (582)
T 3o4h_A 180 SNLSSGGLR-VFDS--------------GEGSFSSASIS-----PGMKVTAGLETAREARLVTV--DPRDGSV--E-DLE 234 (582)
T ss_dssp EETTTCCCE-EECC--------------SSCEEEEEEEC-----TTSCEEEEEECSSCEEEEEE--CTTTCCE--E-ECC
T ss_pred EcCCCCCce-Eeec--------------CCCccccceEC-----CCCCEEEEccCCCeeEEEEE--cCCCCcE--E-Ecc
Confidence 999887654 2322 23367889999 9999999888888 67777 6667663 2 556
Q ss_pred cccCceeEEE--------EcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc
Q 021036 240 AHDQVVTGLA--------WAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 240 ~h~~~v~~~~--------~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
+|...+..++ |+|||.++++++.|+++++|++ ++... .. .+.+.+++|+ +++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~--------------~~~v~~~~~s-dg~ 294 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---AP--------------QGNHGRVVLW-RGK 294 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CC--------------SSEEEEEEEE-TTE
T ss_pred CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cC--------------CCceEEEEec-CCE
Confidence 6777777777 9999998999999999999999 44332 11 1367899999 999
Q ss_pred EEEEE
Q 021036 312 VVAMV 316 (318)
Q Consensus 312 ~l~~~ 316 (318)
+++++
T Consensus 295 ~l~~~ 299 (582)
T 3o4h_A 295 LVTSH 299 (582)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88765
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.62 E-value=5.2e-14 Score=118.90 Aligned_cols=162 Identities=9% Similarity=-0.010 Sum_probs=111.3
Q ss_pred ccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecccc-ccEEEEEeeeecCCCCCCCcEE-EEEe
Q 021036 77 QNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN-SWITSISLAVLSSDSSNPQVLL-VTGS 154 (318)
Q Consensus 77 ~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~l-~s~~ 154 (318)
.+++++++.++++++.++.|++||..+++ .+..+..+. ..+..++| +++++++ +++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~-------s~dg~~~~v~~~ 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT--------------VYKSCVMPDKFGPGTAMM-------APDNRTAYVLNN 62 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE--------------EEEEEECSSCCSSCEEEE-------CTTSSEEEEEET
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc--------------EEEEEecCCCCCCceeEE-------CCCCCEEEEEeC
Confidence 34556667899999999999999998854 344444332 25678999 8888765 4555
Q ss_pred CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC------------CcEEE
Q 021036 155 SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS------------GSFDL 222 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d------------g~i~v 222 (318)
.++.|.+||+.+++....+.....+ ......+..++|+ |+|+++++++.+ +.|.+
T Consensus 63 ~~~~i~~~d~~t~~~~~~~~~~~~~--------~~~~~~~~~~~~s-----pdg~~l~~~~~~~~~~~~~~~~~~~~i~~ 129 (349)
T 1jmx_B 63 HYGDIYGIDLDTCKNTFHANLSSVP--------GEVGRSMYSFAIS-----PDGKEVYATVNPTQRLNDHYVVKPPRLEV 129 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCST--------TEEEECSSCEEEC-----TTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CCCcEEEEeCCCCcEEEEEEccccc--------ccccccccceEEC-----CCCCEEEEEcccccccccccccCCCeEEE
Confidence 7899999999988776655422100 0001246788999 999999998865 89999
Q ss_pred eeeccCCCee-eEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceee
Q 021036 223 WKCDISCNKF-DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQ 278 (318)
Q Consensus 223 w~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 278 (318)
||+ .+++. +.+..+. +...+.+++|+|+|+ +++++. .|.+||+.+++...
T Consensus 130 ~d~--~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 130 FST--ADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTV 180 (349)
T ss_dssp EEG--GGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEE
T ss_pred EEC--CCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceec
Confidence 954 44321 1223333 344688999999999 555543 49999998766543
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=4e-13 Score=113.03 Aligned_cols=199 Identities=11% Similarity=0.017 Sum_probs=130.7
Q ss_pred ccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeee---------ccccccEEEEEeeeecCCC
Q 021036 73 YPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF---------QAHNSWITSISLAVLSSDS 143 (318)
Q Consensus 73 ~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p~~~~~ 143 (318)
.....++++++|+++++...++.|++|+.+.... .+..+ .++......+++
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~-------------~~~~~~~~~~~g~~~~~~~~P~~ia~------- 150 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEG-------------PLLILGRSMQPGSDQNHFCQPTDVAV------- 150 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSSC-------------CSEEESBTTBCCCSTTCCSSEEEEEE-------
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCeE-------------EEEEecccCCCCCCccccCCCcEEEE-------
Confidence 3455666777779999999999999999864310 11222 234456899999
Q ss_pred CC-CCcEEEEEe-CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCCCcE
Q 021036 144 SN-PQVLLVTGS-SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGSGSF 220 (318)
Q Consensus 144 ~~-~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~dg~i 220 (318)
++ ++.++++.+ .++.|++|| ..++....+........ ....+......++++ |+ +.++++...++.|
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~----~~~~~~~~p~gia~d-----~~~g~l~v~d~~~~~I 220 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSS----PRPGQFSVPHSLALV-----PHLDQLCVADRENGRI 220 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSS----CCTTEESCEEEEEEE-----TTTTEEEEEETTTTEE
T ss_pred eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCC----CCCcccCCCcEEEEE-----CCCCEEEEEECCCCEE
Confidence 77 788888886 689999999 45665555432211000 000111246889999 87 8888888889999
Q ss_pred EEeeeccCCCeeeEeeee--ecccCceeEEEEcC------CCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccc
Q 021036 221 DLWKCDISCNKFDKVGSY--NAHDQVVTGLAWAF------DGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCT 292 (318)
Q Consensus 221 ~vw~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~------~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 292 (318)
++| +..+++ .+..+ ..+...+..++|+| +|..+++...+..|++||+.++.........
T Consensus 221 ~~~--~~~~G~--~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~--------- 287 (329)
T 3fvz_A 221 QCF--KTDTKE--FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV--------- 287 (329)
T ss_dssp EEE--ETTTCC--EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS---------
T ss_pred EEE--ECCCCc--EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC---------
Confidence 999 454555 34444 34566788999999 3333333344568999999887766543211
Q ss_pred cCCCcceeeeEEEEcCCCcEEEEE
Q 021036 293 DLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 293 ~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.++...+.+|+++|+|.++++.
T Consensus 288 --~~~~~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 288 --RKHFDMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp --SSCCSSEEEEEECTTSEEEEEE
T ss_pred --CCccCCeeEEEECCCCCEEEEE
Confidence 1233467899999999766654
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=9.7e-14 Score=119.23 Aligned_cols=160 Identities=12% Similarity=0.053 Sum_probs=96.1
Q ss_pred cccccEEEEEeeeecCCCCC-CCcEEEEEeCC------CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEE
Q 021036 126 AHNSWITSISLAVLSSDSSN-PQVLLVTGSSD------GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLS 198 (318)
Q Consensus 126 ~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 198 (318)
.+...+..+.| +| +|+.|+.+..+ ..|.++|...++...... +. ....+....
T Consensus 185 ~~~~~~~~~~~-------sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~------------~~~~~~~~~ 244 (388)
T 3pe7_A 185 QENQWLGHPIY-------RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT-HA------------EGESCTHEF 244 (388)
T ss_dssp EESSCEEEEEE-------ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC-CC------------TTEEEEEEE
T ss_pred cCCccccccEE-------CCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee-CC------------CCcccccce
Confidence 45566888999 88 89888877753 378888876554322211 11 012466778
Q ss_pred EeeccCCCCceEEEEEeC-CC----cEEEeeeccCCCeeeEeeeeecccCc---eeEEEEcCCCCEEEEe---------c
Q 021036 199 LILPVQSPRLMLLAVGKG-SG----SFDLWKCDISCNKFDKVGSYNAHDQV---VTGLAWAFDGCCLYSC---------S 261 (318)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~-dg----~i~vw~~~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~l~s~---------~ 261 (318)
|+ |+|+.|+..+. ++ .|++| +..+++.+.+..+.++... ...+.|+|+|+.|+.. .
T Consensus 245 ~s-----pdg~~l~~~~~~~~~~~~~l~~~--d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 245 WV-----PDGSALVYVSYLKGSPDRFIYSA--DPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EC-----TTSSCEEEEEEETTCCCEEEEEE--CTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred EC-----CCCCEEEEEecCCCCCcceEEEE--ecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 98 99987755442 22 27887 6667665455554432111 2234799999977753 4
Q ss_pred CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 262 QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 262 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.+..|++||+.++....+..+....... ..+....+..++|+|||+.|+..
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~spDg~~l~~~ 368 (388)
T 3pe7_A 318 NDPFLYVFNMKNGTQHRVARHDTSWKVF----EGDRQVTHPHPSFTPDDKQILFT 368 (388)
T ss_dssp CCCEEEEEETTTTEEEEEEECCCCCCCB----TTBSSTTCCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCceEEeccccCccccc----ccccccCCCCccCCCCCCEEEEE
Confidence 5678999999988776665444210000 00000135788999999988754
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=9.6e-13 Score=108.27 Aligned_cols=221 Identities=10% Similarity=0.073 Sum_probs=141.2
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCC-CCCccEEEEecC-CCc
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGS-SNWFSILAVGGR-SGK 95 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~-s~~~~~l~~g~~-dg~ 95 (318)
...++.+.++.|.+||.. ++.+..+.... ....+...+.++++ .++++++++... ++.
T Consensus 42 ~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~-------------------~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKE-GRFKFQFGECG-------------------KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp CEEEEEGGGTEEEEECTT-SCEEEEECCBS-------------------SSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CEEEEECCCCEEEEECCC-CcEEEEecccC-------------------CCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 445566778888888865 33322221100 00112222333344 233467666643 889
Q ss_pred EEEEEccCCccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
|++|+. +++ .+..+. .+...+.++++ .++++++++...++.|.+||.. ++....+.
T Consensus 102 i~~~d~-~g~--------------~~~~~~~~~~~~~~~i~~-------~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 158 (286)
T 1q7f_A 102 IQIYNQ-YGQ--------------FVRKFGATILQHPRGVTV-------DNKGRIIVVECKVMRVIIFDQN-GNVLHKFG 158 (286)
T ss_dssp EEEECT-TSC--------------EEEEECTTTCSCEEEEEE-------CTTSCEEEEETTTTEEEEECTT-SCEEEEEE
T ss_pred EEEECC-CCc--------------EEEEecCccCCCceEEEE-------eCCCCEEEEECCCCEEEEEcCC-CCEEEEeC
Confidence 999994 432 333342 34457899999 8889888888888999999964 44444332
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecc--cCceeEEEEcC
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAH--DQVVTGLAWAF 252 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~ 252 (318)
.. .+...+..++++ ++++++++...++.|++|+ .... .+..+..+ ...+..+++++
T Consensus 159 ~~------------~~~~~p~~i~~~-----~~g~l~v~~~~~~~i~~~~--~~g~---~~~~~~~~g~~~~p~~i~~d~ 216 (286)
T 1q7f_A 159 CS------------KHLEFPNGVVVN-----DKQEIFISDNRAHCVKVFN--YEGQ---YLRQIGGEGITNYPIGVGINS 216 (286)
T ss_dssp CT------------TTCSSEEEEEEC-----SSSEEEEEEGGGTEEEEEE--TTCC---EEEEESCTTTSCSEEEEEECT
T ss_pred CC------------CccCCcEEEEEC-----CCCCEEEEECCCCEEEEEc--CCCC---EEEEEccCCccCCCcEEEECC
Confidence 11 112257889999 8999888888899999994 4332 33344332 35788999999
Q ss_pred CCCEEEEecCCC-cEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 253 DGCCLYSCSQDN-FVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 253 ~~~~l~s~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+|.++++...++ .|.+||........+...... ..+.+++++|+|+++++.
T Consensus 217 ~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~-------------~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 217 NGEILIADNHNNFNLTIFTQDGQLISALESKVKH-------------AQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp TCCEEEEECSSSCEEEEECTTSCEEEEEEESSCC-------------SCEEEEEEETTTEEEEEE
T ss_pred CCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCC-------------CcceeEEECCCCcEEEEC
Confidence 999888887776 999999765555444433221 146799999999887763
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=1.1e-13 Score=118.89 Aligned_cols=180 Identities=13% Similarity=-0.031 Sum_probs=119.8
Q ss_pred cCCCCCccEEEEecC-CCc--EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 78 NGSSNWFSILAVGGR-SGK--VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 78 ~~~s~~~~~l~~g~~-dg~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
..++|+|++|+.++. +|. |.+||+.+++ ..+...++...+..+.| +++|+.|+.++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------------~~~lt~~~~~~~~~~~~-------spdg~~l~~~~ 99 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------------ATQLTEGRGDNTFGGFL-------SPDDDALFYVK 99 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------------EEECCCSSCBCSSSCEE-------CTTSSEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------------eEEeeeCCCCCccceEE-------cCCCCEEEEEe
Confidence 344444588888776 674 7778887754 33444555555556789 99999999999
Q ss_pred CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEE--EeeccCCCCceEEEEE------------------
Q 021036 155 SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLS--LILPVQSPRLMLLAVG------------------ 214 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~~~~~~~~~l~~~------------------ 214 (318)
.++.|++||+.+++.......+. ..+.... ++ +++.+++..
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~~--------------~~~~~~~~~~~-----~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVPA--------------EWVGYGTWVAN-----SDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECCT--------------TEEEEEEEEEC-----TTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred CCCeEEEEECCCCcceeeeechh--------------hcccccceeEC-----CCCCeeccccccCcccccccccchhhh
Confidence 99999999999887655443222 1222222 35 788887642
Q ss_pred ----eCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcC-CCCEEEEecCC------CcEEEEEecCCceeeeecCC
Q 021036 215 ----KGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAF-DGCCLYSCSQD------NFVRSWIFHGNSLSQVSIPT 283 (318)
Q Consensus 215 ----~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~ 283 (318)
..+..|++| ++.+++.. .+..+...+..++|+| +|+.|+..+.+ ..|.++|+.++....+....
T Consensus 161 ~~~~~~~~~l~~~--d~~~g~~~---~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 235 (388)
T 3pe7_A 161 FYFTKPCCRLMRV--DLKTGEST---VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA 235 (388)
T ss_dssp HGGGCCCEEEEEE--ETTTCCEE---EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC
T ss_pred hhccCCcceEEEE--ECCCCceE---EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC
Confidence 233556666 66666532 3445667789999999 99988776653 37788887766555443222
Q ss_pred CCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 284 NTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 284 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
. ...+..++|+|||+.|+.
T Consensus 236 ~-------------~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 236 E-------------GESCTHEFWVPDGSALVY 254 (388)
T ss_dssp T-------------TEEEEEEEECTTSSCEEE
T ss_pred C-------------CcccccceECCCCCEEEE
Confidence 1 125778999999997765
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.59 E-value=4.6e-13 Score=114.11 Aligned_cols=227 Identities=11% Similarity=0.028 Sum_probs=143.4
Q ss_pred CcCCCCCccceEEee------CCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCC
Q 021036 10 NKMKDSNTHPTVAAS------KSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNW 83 (318)
Q Consensus 10 ~~~~~~~~~~~~t~s------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~ 83 (318)
.++.+.+.+.++... .|+++.+||..+++.+..+.... . . .++++|++
T Consensus 8 ~~~~~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~----~----p-~i~~spdg----------------- 61 (361)
T 2oiz_A 8 HSVSAPQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAF----N----G-HVQVSNDG----------------- 61 (361)
T ss_dssp CCCSSCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCE----E----E-EEEECTTS-----------------
T ss_pred cCcCCCCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCC----C----C-ceEECCCC-----------------
Confidence 344444455555433 47899999998887654443211 0 1 26777776
Q ss_pred ccEEEEec----------CCCcEEEEEccCCccccccccccCCceeEEeeecc------ccccEEEEEeeeecCCCCCCC
Q 021036 84 FSILAVGG----------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA------HNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 84 ~~~l~~g~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~~~~~ 147 (318)
++++++. .++.|.+||..+.+ .+..+.. +......+++ +++|
T Consensus 62 -~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------------~~~~i~~~~~~~~~g~~p~~i~~-------spdg 119 (361)
T 2oiz_A 62 -KKIYTMTTYHERITRGKRSDVVEVWDADKLT--------------FEKEISLPPKRVQGLNYDGLFRQ-------TTDG 119 (361)
T ss_dssp -SEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------------EEEEEEECTTBCCBCCCGGGEEE-------CTTS
T ss_pred -CEEEEEEecccccccCCCCCEEEEEECcCCc--------------EEEEEEcCccccccCCCcceEEE-------CCCC
Confidence 8888875 36789999998754 3333322 1234567888 8999
Q ss_pred cEEEEEeC--CCcEEEEECCCcceeee-eccccc------c-----------------ccc--ceeee------------
Q 021036 148 VLLVTGSS--DGSVRIWDGYIQELQKS-AEAHCV------P-----------------FSL--LKEVV------------ 187 (318)
Q Consensus 148 ~~l~s~~~--d~~v~iwd~~~~~~~~~-~~~~~~------~-----------------~~~--~~~~~------------ 187 (318)
++|+++.. +++|.+||+.+++.+.. +..... + +.. .....
T Consensus 120 ~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 120 KFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp SEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred CEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 99988864 57899999988776655 322110 0 000 00000
Q ss_pred -----------------eecc---------------------------------cceeEEEEeeccCCCCceEEEEEeC-
Q 021036 188 -----------------TVNT---------------------------------VPISVLSLILPVQSPRLMLLAVGKG- 216 (318)
Q Consensus 188 -----------------~~~~---------------------------------~~v~~l~~~~~~~~~~~~~l~~~~~- 216 (318)
.... .....++++ |+++.++++..
T Consensus 200 ~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~-----~dg~~lyv~~~~ 274 (361)
T 2oiz_A 200 DDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLH-----RASGRMYVFMHP 274 (361)
T ss_dssp TSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEE-----TTTTEEEEEEES
T ss_pred CCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEe-----cCCCeEEEEEcc
Confidence 0000 001115666 77666666543
Q ss_pred ----------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCC--ceeeee-cCC
Q 021036 217 ----------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGN--SLSQVS-IPT 283 (318)
Q Consensus 217 ----------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~-~~~ 283 (318)
.+.|.+| |..+.+ .+.++..+. +.+++|+|+|++|++++. ++|.+||+.++ +..... ...
T Consensus 275 ~~~~~~~~~~~~~v~vi--D~~t~~--~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G 347 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVM--DTKTKQ--RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAA 347 (361)
T ss_dssp SCCTTCTTCCCSEEEEE--ETTTTE--EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSC
T ss_pred CCCcccccCCCceEEEE--ECCCCc--EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCC
Confidence 3467777 677776 677777666 899999999999988887 99999999998 554332 222
Q ss_pred CCCCccccccCCCcceeeeEEEEcCCCc
Q 021036 284 NTPGLQSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 284 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
.....++++|+|.
T Consensus 348 ---------------~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 348 ---------------EASLQVQFHPVGG 360 (361)
T ss_dssp ---------------SSEEEEEECCCSC
T ss_pred ---------------CCcEEEEecCCCC
Confidence 2558899999985
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.58 E-value=6.3e-14 Score=130.69 Aligned_cols=140 Identities=12% Similarity=0.081 Sum_probs=96.6
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccc-----cEEEEEeeeecCCCCCCCcEEEEEeCC---
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS-----WITSISLAVLSSDSSNPQVLLVTGSSD--- 156 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~~~~~~~l~s~~~d--- 156 (318)
++++++ ||.|++||+.++++ ...+.+|.. ....+.| +|+|++|+.++.+
T Consensus 29 ~~~~~~--~~~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-------Spdg~~l~~~~~~~~~ 85 (740)
T 4a5s_A 29 EYLYKQ--ENNILVFNAEYGNS--------------SVFLENSTFDEFGHSINDYSI-------SPDGQFILLEYNYVKQ 85 (740)
T ss_dssp EEEEEE--TTEEEEEETTTCCE--------------EEEECTTTTTTCCSCCCEEEE-------CTTSSEEEEEEEEEEC
T ss_pred cEEEEc--CCcEEEEECCCCce--------------EEEEechhhhhhcccccceEE-------CCCCCEEEEEECCeee
Confidence 888886 89999999998653 234555542 2345789 9999999999876
Q ss_pred ------CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCC
Q 021036 157 ------GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCN 230 (318)
Q Consensus 157 ------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~ 230 (318)
+.+.+||+.+++... +.. +...+...+|+ |||+.||.+. ++.|++| +..++
T Consensus 86 ~r~~~~~~~~~~d~~~~~~~~-l~~--------------~~~~~~~~~~S-----PdG~~la~~~-~~~i~~~--~~~~~ 142 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQLIT-EER--------------IPNNTQWVTWS-----PVGHKLAYVW-NNDIYVK--IEPNL 142 (740)
T ss_dssp SSSCEEEEEEEEETTTTEECC-SSC--------------CCTTEEEEEEC-----SSTTCEEEEE-TTEEEEE--SSTTS
T ss_pred EEEccceEEEEEECCCCcEEE-ccc--------------CCCcceeeEEC-----CCCCEEEEEE-CCeEEEE--ECCCC
Confidence 566799999887543 222 22367889999 9999999885 7899999 55555
Q ss_pred eeeEeeeeecccCce-----------------eEEEEcCCCCEEEEecCCCc-EEEEEe
Q 021036 231 KFDKVGSYNAHDQVV-----------------TGLAWAFDGCCLYSCSQDNF-VRSWIF 271 (318)
Q Consensus 231 ~~~~~~~~~~h~~~v-----------------~~~~~~~~~~~l~s~~~d~~-v~iwd~ 271 (318)
....+ +..++...+ ..+.|||||++||.++.|.+ +.+|++
T Consensus 143 ~~~~l-t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~ 200 (740)
T 4a5s_A 143 PSYRI-TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (740)
T ss_dssp CCEEC-CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred ceEEE-cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEE
Confidence 42222 122232222 35899999999998765433 555544
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=1.2e-13 Score=118.74 Aligned_cols=169 Identities=10% Similarity=-0.016 Sum_probs=107.5
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEE-------------------EEeeeecCCCCC
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITS-------------------ISLAVLSSDSSN 145 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------~~~~p~~~~~~~ 145 (318)
+.|+..+.++.|++|++.+++.. .....+...... +.| ++
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~--------------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~-------sp 151 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQ--------------VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDW-------QP 151 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEE--------------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC-------CC
T ss_pred CEEEEEEcCCcEEEEECCCCCcE--------------EEEecccccCCCCCEEEeccCCcccccccccccc-------CC
Confidence 89988888889999999886521 112212221111 344 56
Q ss_pred CCcEEEEE-----eCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCC-
Q 021036 146 PQVLLVTG-----SSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSG- 218 (318)
Q Consensus 146 ~~~~l~s~-----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg- 218 (318)
+++.++.+ ..+..|.+||+.+++...... +...+..+.|+ | ++..|+..+.++
T Consensus 152 dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~---------------~~~~~~~~~~s-----p~dg~~l~~~~~~~~ 211 (396)
T 3c5m_A 152 LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ---------------DTAWLGHPIYR-----PFDDSTVGFCHEGPH 211 (396)
T ss_dssp CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE---------------ESSCEEEEEEE-----TTEEEEEEEEECSCS
T ss_pred CCcceeeeeeccCCCcceEEEEECCCCcEEeecc---------------CCcccccceEC-----CCCCCEEEEEecCCC
Confidence 67666554 356789999998876543321 22367888999 8 788776665443
Q ss_pred -----cEEEeeeccCCCeeeEeeeeecc--cCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCceeeeecCCCCC
Q 021036 219 -----SFDLWKCDISCNKFDKVGSYNAH--DQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSLSQVSIPTNTP 286 (318)
Q Consensus 219 -----~i~vw~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~ 286 (318)
.|.+| +...+....+ ..+ ...+..+.|+|+|++|+.++.+ +.|++||+.++....+...+
T Consensus 212 ~~~~~~l~~~--d~~~~~~~~l---~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--- 283 (396)
T 3c5m_A 212 DLVDARMWLV--NEDGSNVRKI---KEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--- 283 (396)
T ss_dssp SSCSCCCEEE--ETTSCCCEES---SCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---
T ss_pred CCCCceEEEE--ECCCCceeEe---eccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---
Confidence 45666 5555442222 222 2357889999999987776544 44999999887665443222
Q ss_pred CccccccCCCcceeeeEEEEcC-CCcEEEEE
Q 021036 287 GLQSCTDLPDAFVSCLGMAVSP-GNLVVAMV 316 (318)
Q Consensus 287 ~~~~~~~~~~h~~~v~~v~~sp-~~~~l~~~ 316 (318)
... ++|+| ||++++.+
T Consensus 284 -------------~~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 284 -------------PCS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp -------------SEE-EEEECSSSSEEEEE
T ss_pred -------------CCC-CCccCCCCceEEEe
Confidence 112 89999 99988763
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.55 E-value=6.1e-13 Score=122.47 Aligned_cols=152 Identities=9% Similarity=-0.035 Sum_probs=106.0
Q ss_pred cEEEEecCC----------CcEEEEEccC------CccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCCCCC
Q 021036 85 SILAVGGRS----------GKVSLWRICV------PKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSSNPQ 147 (318)
Q Consensus 85 ~~l~~g~~d----------g~i~iw~~~~------~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~ 147 (318)
+.|+.++.+ ..|++|++.+ ++ .+.+. .+...+..++| +++|
T Consensus 142 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~l~~~~~~~~~~~~~-------SpDG 199 (662)
T 3azo_A 142 GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---------------VRELSDDAHRFVTGPRL-------SPDG 199 (662)
T ss_dssp TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---------------SEESSCSCSSEECCCEE-------CTTS
T ss_pred CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---------------eeEEEecCCCcccCceE-------CCCC
Confidence 888888776 5799999987 33 12334 45567888999 9999
Q ss_pred cEEEEEeCC--------CcEEEEECC-Ccc--eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC
Q 021036 148 VLLVTGSSD--------GSVRIWDGY-IQE--LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG 216 (318)
Q Consensus 148 ~~l~s~~~d--------~~v~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~ 216 (318)
++|+.++.+ ..|++||+. +++ ....+. ..+...+..+.|+ |+|+++++++.
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-------------~~~~~~~~~~~~s-----pdg~l~~~~~~ 261 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-------------GGPEEAIAQAEWA-----PDGSLIVATDR 261 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-------------EETTBCEEEEEEC-----TTSCEEEEECT
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-------------CCCCceEcceEEC-----CCCeEEEEECC
Confidence 999988755 379999998 452 222221 2223478889999 99998888888
Q ss_pred CCcEEEeeeccCCCeeeEeeeeecccCc--------eeEEEEcCCCCEEEEecCCCcEEEE--EecCCceeee
Q 021036 217 SGSFDLWKCDISCNKFDKVGSYNAHDQV--------VTGLAWAFDGCCLYSCSQDNFVRSW--IFHGNSLSQV 279 (318)
Q Consensus 217 dg~i~vw~~~~~~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~l~s~~~d~~v~iw--d~~~~~~~~~ 279 (318)
++..+||.++..+++.+.+. ..+... +..++|+|+++++++++. +.++|| |+.++....+
T Consensus 262 ~~~~~l~~~~~~~~~~~~l~--~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 262 TGWWNLHRVDPATGAATQLC--RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDA 331 (662)
T ss_dssp TSSCEEEEECTTTCCEEESS--CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEEC
T ss_pred CCCeEEEEEECCCCceeecc--cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEe
Confidence 89777776677666533322 222211 467899999999999998 999999 4445555443
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.53 E-value=6.2e-12 Score=103.38 Aligned_cols=191 Identities=10% Similarity=0.097 Sum_probs=131.1
Q ss_pred CCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeec------cccccEEEEEeeeecC
Q 021036 68 LSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ------AHNSWITSISLAVLSS 141 (318)
Q Consensus 68 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~ 141 (318)
..++.....+++++++++++++...++.|.+|+.+. + .+..+. ++...+.++++
T Consensus 25 ~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~--------------~~~~~~~~~~~~~~~~~p~~i~~----- 84 (286)
T 1q7f_A 25 MEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-R--------------FKFQFGECGKRDSQLLYPNRVAV----- 84 (286)
T ss_dssp STTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-C--------------EEEEECCBSSSTTCBSSEEEEEE-----
T ss_pred CCCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-c--------------EEEEecccCCCcccccCceEEEE-----
Confidence 344555666777777779989888899999999873 2 222222 34456888888
Q ss_pred CCCCCCcEEEEEeC-CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcE
Q 021036 142 DSSNPQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSF 220 (318)
Q Consensus 142 ~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i 220 (318)
..++++++++... ++.|.+|| .+++....+... +...+..++++ ++|+++++...++.|
T Consensus 85 -~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~-------------~~~~~~~i~~~-----~~g~l~v~~~~~~~i 144 (286)
T 1q7f_A 85 -VRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGAT-------------ILQHPRGVTVD-----NKGRIIVVECKVMRV 144 (286)
T ss_dssp -ETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTT-------------TCSCEEEEEEC-----TTSCEEEEETTTTEE
T ss_pred -EcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCc-------------cCCCceEEEEe-----CCCCEEEEECCCCEE
Confidence 2356666666643 88999999 456555544321 12256789998 899988888888999
Q ss_pred EEeeeccCCCeeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcc
Q 021036 221 DLWKCDISCNKFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAF 298 (318)
Q Consensus 221 ~vw~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 298 (318)
.+| +.... .+..+. .+...+..++++++|+++++...++.|++||........+.... +.
T Consensus 145 ~~~--~~~g~---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g-------------~~ 206 (286)
T 1q7f_A 145 IIF--DQNGN---VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEG-------------IT 206 (286)
T ss_dssp EEE--CTTSC---EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTT-------------TS
T ss_pred EEE--cCCCC---EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCC-------------cc
Confidence 999 44332 233332 34456899999999998888888999999998655444432221 12
Q ss_pred eeeeEEEEcCCCcEEEEE
Q 021036 299 VSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 299 ~~v~~v~~sp~~~~l~~~ 316 (318)
..+.+++++|+|+++++.
T Consensus 207 ~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIAD 224 (286)
T ss_dssp CSEEEEEECTTCCEEEEE
T ss_pred CCCcEEEECCCCCEEEEe
Confidence 356899999999877765
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=9.8e-13 Score=121.09 Aligned_cols=157 Identities=8% Similarity=-0.042 Sum_probs=102.0
Q ss_pred ccccEEEEEeeeecCCCCCCCcEEEEEeCC----------CcEEEEECCC------cceeeeecccccccccceeeeeec
Q 021036 127 HNSWITSISLAVLSSDSSNPQVLLVTGSSD----------GSVRIWDGYI------QELQKSAEAHCVPFSLLKEVVTVN 190 (318)
Q Consensus 127 h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d----------~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 190 (318)
|...+..++| +++|+.|++++.| ..|++||+.+ ++.......+
T Consensus 128 ~~~~~~~~~~-------spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~-------------- 186 (662)
T 3azo_A 128 GGLRWADPVL-------LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDA-------------- 186 (662)
T ss_dssp TCEEEEEEEE-------ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSC--------------
T ss_pred CCccccCcEE-------CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecC--------------
Confidence 6678899999 9999999998877 5899999987 5433222011
Q ss_pred ccceeEEEEeeccCCCCceEEEEEeCCC--------cEEEeeeccC-CCeeeEeeee-ecccCceeEEEEcCCCCEEEEe
Q 021036 191 TVPISVLSLILPVQSPRLMLLAVGKGSG--------SFDLWKCDIS-CNKFDKVGSY-NAHDQVVTGLAWAFDGCCLYSC 260 (318)
Q Consensus 191 ~~~v~~l~~~~~~~~~~~~~l~~~~~dg--------~i~vw~~~~~-~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~ 260 (318)
...+..++|+ |||+.|+.++.++ .|++|+ .. ++.......+ .+|...+..+.|+|||++++++
T Consensus 187 ~~~~~~~~~S-----pDG~~la~~~~~~~~~~~~~~~i~~~d--~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 187 HRFVTGPRLS-----PDGRQAVWLAWDHPRMPWEGTELKTAR--VTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp SSEECCCEEC-----TTSSEEEEEEECTTCCTTTCEEEEEEE--ECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEE
T ss_pred CCcccCceEC-----CCCCEEEEEECCCCCCCCCCcEEEEEE--ECCCCcccccEEeCCCCCceEcceEECCCCeEEEEE
Confidence 1256677898 9999998877553 688884 44 3411122223 3456789999999999988888
Q ss_pred cCCC--cEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 261 SQDN--FVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 261 ~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+.++ .|.+||+.++....+....... ....-.-.+..++|+|++++++++.
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~------~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQLCRREEEF------AGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEESSCCSSBS------SCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred CCCCCeEEEEEECCCCceeecccccccc------cCccccccCceEeEeCCCEEEEEEE
Confidence 8888 5556665566554433221100 0000001146789999999888763
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=3.6e-13 Score=114.45 Aligned_cols=188 Identities=13% Similarity=0.102 Sum_probs=121.6
Q ss_pred ccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 75 VPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
+..+++++.+.++++|+.++ +++|+.+..+...... ....+... ...+.. |+.++| ++.+|+++
T Consensus 40 ~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~---~~~~~~~~-~~~lp~-V~~l~f---------d~~~L~v~- 103 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSD---STPLTFKW-EKEIPD-VIFVCF---------HGDQVLVS- 103 (388)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSS---SCCCCCSE-EEECTT-EEEEEE---------ETTEEEEE-
T ss_pred ccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccc---cccccceE-EeeCCC-eeEEEE---------CCCEEEEE-
Confidence 44444444458999999885 6669986532100000 00011111 223556 999998 56788888
Q ss_pred CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeE
Q 021036 155 SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDK 234 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 234 (318)
.++.|++||+++.........+ ..++..+.+. +. .+++++.||.+.+| ++..+....
T Consensus 104 ~~~~l~v~dv~sl~~~~~~~~~--------------~~~v~~i~~~-----~p--~~av~~~dG~L~v~--dl~~~~~~~ 160 (388)
T 1xip_A 104 TRNALYSLDLEELSEFRTVTSF--------------EKPVFQLKNV-----NN--TLVILNSVNDLSAL--DLRTKSTKQ 160 (388)
T ss_dssp ESSEEEEEESSSTTCEEEEEEC--------------SSCEEEEEEC-----SS--EEEEEETTSEEEEE--ETTTCCEEE
T ss_pred cCCcEEEEEchhhhccCcccee--------------ecceeeEEec-----CC--CEEEEECCCCEEEE--EccCCcccc
Confidence 8899999999876544433322 2356666665 22 28888999999999 455544211
Q ss_pred eeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCce--e-eeecCCCCCCccccccCCCcceeeeEEEEcCCCc
Q 021036 235 VGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL--S-QVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 235 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~-~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
+...|++++|+|+| ++.|..||++++|+..+... . .+...+. ..+..+|...|.+|.|.++++
T Consensus 161 ------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~------~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 161 ------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE------LEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp ------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH------HHTSCTTTSEEEEEEESSSSE
T ss_pred ------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc------cccccCCCeeEEEEEEecCCe
Confidence 44589999999999 67899999999999888774 2 3321110 011123557999999999999
Q ss_pred EEEE
Q 021036 312 VVAM 315 (318)
Q Consensus 312 ~l~~ 315 (318)
++++
T Consensus 227 flv~ 230 (388)
T 1xip_A 227 FLAV 230 (388)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9886
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.51 E-value=2e-11 Score=102.61 Aligned_cols=223 Identities=9% Similarity=-0.045 Sum_probs=131.0
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC----C
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS----G 94 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d----g 94 (318)
..+++..++.|.+||..+++....... ... .+..++|+|++ +++++...+ +
T Consensus 58 l~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~---~~~~i~~~~dg------------------~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 58 LFLLDVFEGNIFKINPETKEIKRPFVS----HKA---NPAAIKIHKDG------------------RLFVCYLGDFKSTG 112 (333)
T ss_dssp EEEEETTTCEEEEECTTTCCEEEEEEC----SSS---SEEEEEECTTS------------------CEEEEECTTSSSCC
T ss_pred EEEEECCCCEEEEEeCCCCcEEEEeeC----CCC---CcceEEECCCC------------------cEEEEeCCCCCCCc
Confidence 334566677777777766553221110 111 12335555555 888877666 6
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC------CCcEEEEECCCcc
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS------DGSVRIWDGYIQE 168 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~------d~~v~iwd~~~~~ 168 (318)
.|.+||.+++.. ..+.....+...+.++.+ .++|+++++... .+.|..+|..+++
T Consensus 113 ~i~~~d~~~~~~------------~~~~~~~~~~~~~~~i~~-------d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 113 GIFAATENGDNL------------QDIIEDLSTAYCIDDMVF-------DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp EEEEECTTSCSC------------EEEECSSSSCCCEEEEEE-------CTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred eEEEEeCCCCEE------------EEEEccCccCCcccceEE-------CCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 899999887542 111111123457899999 888988877654 2456666655443
Q ss_pred eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEE-EEEeCCCcEEEeeeccCCCeeeEe-----eeeeccc
Q 021036 169 LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLL-AVGKGSGSFDLWKCDISCNKFDKV-----GSYNAHD 242 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~~~~~-----~~~~~h~ 242 (318)
...... ....+..++|+ |+++.+ ++.+.++.|.+|+.+......... ..+.++
T Consensus 174 ~~~~~~---------------~~~~~~~i~~~-----~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 174 VTPIIQ---------------NISVANGIALS-----TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp EEEEEE---------------EESSEEEEEEC-----TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred EEEeec---------------CCCcccceEEC-----CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 322111 11246788998 898755 455567899999654222221111 111222
Q ss_pred CceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 243 QVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 243 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
..+..++++++|.++++...++.|.+||..+.....+..... ..+|...+.+++|+||++.|..
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~---------~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGR---------DEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTG---------GGTCSCBCCEEEECTTSCEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCC---------ccccccCcceEEECCCCCEEEE
Confidence 367889999999988887778999999985444443332211 0112235689999999865543
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.48 E-value=1.2e-12 Score=112.47 Aligned_cols=237 Identities=9% Similarity=-0.008 Sum_probs=138.3
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCC---C----cccccccCCCCCccEEE
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSS---K----KYPVPQNGSSNWFSILA 88 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~---~----~~~v~~~~~s~~~~~l~ 88 (318)
+...++.++.++.+.+||+.+++......... .|.|++.... . ......+.++|+++.++
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~-------------~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~ 157 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEEQVIYTVDE-------------EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEK 157 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCT-------------TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred CCCEEEEEEcCCcEEEEECCCCCcEEEEeccc-------------ccCCCCCEEEeccCCccccccccccccCCCCccee
Confidence 44557788888899999998876533332111 0222210000 0 00011245566667766
Q ss_pred Ee-----cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCC------
Q 021036 89 VG-----GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSD------ 156 (318)
Q Consensus 89 ~g-----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d------ 156 (318)
.. ..+..|.+||+.+++. ..+..+...+..+.| ++ +++.|+..+.+
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~---------------~~~~~~~~~~~~~~~-------sp~dg~~l~~~~~~~~~~~~ 215 (396)
T 3c5m_A 158 FAEFYHTNPTCRLIKVDIETGEL---------------EVIHQDTAWLGHPIY-------RPFDDSTVGFCHEGPHDLVD 215 (396)
T ss_dssp HHHHHHTCCCEEEEEEETTTCCE---------------EEEEEESSCEEEEEE-------ETTEEEEEEEEECSCSSSCS
T ss_pred eeeeccCCCcceEEEEECCCCcE---------------EeeccCCcccccceE-------CCCCCCEEEEEecCCCCCCC
Confidence 54 4567899999987542 122245677899999 77 77777766543
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC-----CcEEEeeeccCCCe
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS-----GSFDLWKCDISCNK 231 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~ 231 (318)
..|.+||+..++...... +. ....+..+.|+ |+|+.|+.++.+ +.|++| +..+++
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~------------~~~~~~~~~~s-----pdg~~l~~~~~~~~~~~~~l~~~--d~~~g~ 275 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HA------------EGESCTHEFWI-----PDGSAMAYVSYFKGQTDRVIYKA--NPETLE 275 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CC------------TTEEEEEEEEC-----TTSSCEEEEEEETTTCCEEEEEE--CTTTCC
T ss_pred ceEEEEECCCCceeEeec-cC------------CCccccceEEC-----CCCCEEEEEecCCCCccceEEEE--ECCCCC
Confidence 368888887654322221 10 01246778998 999977766543 348888 566665
Q ss_pred eeEeeeeecccCceeEEEEcC-CCCEEEEec----------------CCCcEEEEEecCCceeeeecCCCCCCccccccC
Q 021036 232 FDKVGSYNAHDQVVTGLAWAF-DGCCLYSCS----------------QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDL 294 (318)
Q Consensus 232 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
...+..+.+ .. +.|+| +|+++++++ .+..|++||+.++....+..+....... .
T Consensus 276 ~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~----~ 346 (396)
T 3c5m_A 276 NEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVL----D 346 (396)
T ss_dssp EEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCB----T
T ss_pred eEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccc----c
Confidence 434433322 23 88999 999887754 3478999999887765554333200000 0
Q ss_pred CCcceeeeEEEEcCCCcEEEEE
Q 021036 295 PDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 295 ~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
......+..++|+|||+.|+.+
T Consensus 347 ~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 347 GDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp TBSSTTCCCCEECTTSSEEEEE
T ss_pred ccccCCCCCceEccCCCeEEEE
Confidence 0000014567899999888765
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=2.8e-11 Score=100.06 Aligned_cols=213 Identities=12% Similarity=0.055 Sum_probs=130.6
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSL 98 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 98 (318)
.++++..++.+.+||..++ ...+.. ... .+..++++|++ +++++...++.|.+
T Consensus 42 l~~~~~~~~~i~~~~~~~~--~~~~~~----~~~---~~~~l~~~~dg------------------~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ--LSPEMH----PSH---HQNGHCLNKQG------------------HLIACSHGLRRLER 94 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC--EEEEES----SCS---SEEEEEECTTC------------------CEEEEETTTTEEEE
T ss_pred EEEEeCCCCEEEEEECCCC--eEEEEC----CCC---CcceeeECCCC------------------cEEEEecCCCeEEE
Confidence 4566677778888887665 222211 111 12235565555 88888777889999
Q ss_pred EEccCCccccccccccCCceeEEeeecc-ccccEEEEEeeeecCCCCCCCcEEEEEeC-----------------CCcEE
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQA-HNSWITSISLAVLSSDSSNPQVLLVTGSS-----------------DGSVR 160 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~l~s~~~-----------------d~~v~ 160 (318)
|+..+++.. ........ ....++.+++ .++|+++++.+. .+.|.
T Consensus 95 ~d~~~g~~~-----------~~~~~~~~~~~~~~~~i~~-------d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 95 QREPGGEWE-----------SIADSFEGKKLNSPNDVCL-------APDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp ECSTTCCEE-----------EEECEETTEECCCCCCEEE-------CTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred EcCCCCcEE-----------EEeeccCCCCCCCCCCEEE-------CCCCCEEEECCccccccccccccccccCCCcEEE
Confidence 999776521 11111111 1235678999 889998887321 23555
Q ss_pred EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCee-eEeeeee
Q 021036 161 IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKF-DKVGSYN 239 (318)
Q Consensus 161 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~ 239 (318)
.++.. ++.. .+.. +......++|+ |+++.+++.+.++.|++|+++. .++. .....+.
T Consensus 157 ~~~~~-g~~~-~~~~--------------~~~~~~gi~~s-----~dg~~lv~~~~~~~i~~~~~~~-~g~~~~~~~~~~ 214 (296)
T 3e5z_A 157 RLAPD-GTLS-APIR--------------DRVKPNGLAFL-----PSGNLLVSDTGDNATHRYCLNA-RGETEYQGVHFT 214 (296)
T ss_dssp EECTT-SCEE-EEEC--------------CCSSEEEEEEC-----TTSCEEEEETTTTEEEEEEECS-SSCEEEEEEEEC
T ss_pred EECCC-CCEE-Eeec--------------CCCCCccEEEC-----CCCCEEEEeCCCCeEEEEEECC-CCcCcCCCeEee
Confidence 55544 3322 2111 12245789999 9999887777889999996642 3332 1122233
Q ss_pred cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEE-cCCCcEEEEE
Q 021036 240 AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAV-SPGNLVVAMV 316 (318)
Q Consensus 240 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-sp~~~~l~~~ 316 (318)
.+...+.+++++++|+++++. ++.|.+||..+.....+.... . +.+++| +|+++.|.++
T Consensus 215 ~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~---------------~-~~~~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 215 VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQ---------------T-TSNLCFGGPEGRTLYMT 274 (296)
T ss_dssp CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSS---------------C-CCEEEEESTTSCEEEEE
T ss_pred CCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCC---------------C-ceeEEEECCCCCEEEEE
Confidence 345567889999999866666 789999998754444433222 2 588999 5888766654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=1.3e-11 Score=102.04 Aligned_cols=183 Identities=13% Similarity=0.040 Sum_probs=123.8
Q ss_pred eeeecccccCCCCcccccccCCCCCcc-EEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEee
Q 021036 59 AVAWSPVLRLSSKKYPVPQNGSSNWFS-ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLA 137 (318)
Q Consensus 59 ~~~w~p~~~~~~~~~~v~~~~~s~~~~-~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 137 (318)
.++|+|++ + +++++..++.|..|+..++ ...+..+...+.++++
T Consensus 32 g~~~d~~g------------------~~l~~~~~~~~~i~~~~~~~~----------------~~~~~~~~~~~~~l~~- 76 (296)
T 3e5z_A 32 GPVYVPAR------------------SAVIFSDVRQNRTWAWSDDGQ----------------LSPEMHPSHHQNGHCL- 76 (296)
T ss_dssp EEEEEGGG------------------TEEEEEEGGGTEEEEEETTSC----------------EEEEESSCSSEEEEEE-
T ss_pred CCeEeCCC------------------CEEEEEeCCCCEEEEEECCCC----------------eEEEECCCCCcceeeE-
Confidence 47888887 6 8888999999999999863 3445556778999999
Q ss_pred eecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC
Q 021036 138 VLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS 217 (318)
Q Consensus 138 p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d 217 (318)
+++|+++++...++.|.+||..+++.......... .....++.++++ |+|+++++.+..
T Consensus 77 ------~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~----------~~~~~~~~i~~d-----~~G~l~vtd~~~ 135 (296)
T 3e5z_A 77 ------NKQGHLIACSHGLRRLERQREPGGEWESIADSFEG----------KKLNSPNDVCLA-----PDGSLWFSDPTY 135 (296)
T ss_dssp ------CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT----------EECCCCCCEEEC-----TTSCEEEEECSH
T ss_pred ------CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC----------CCCCCCCCEEEC-----CCCCEEEECCcc
Confidence 88999888777789999999977765433221110 112246778998 899988873211
Q ss_pred ---------------CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEec-CCce---ee
Q 021036 218 ---------------GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH-GNSL---SQ 278 (318)
Q Consensus 218 ---------------g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~---~~ 278 (318)
+.-.||.++.. ++. ..+..+......++|+|+|+.+++.+.++.|.+|++. .+.+ ..
T Consensus 136 g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~---~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~ 211 (296)
T 3e5z_A 136 GIDKPEEGYGGEMELPGRWVFRLAPD-GTL---SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV 211 (296)
T ss_dssp HHHCGGGSSCCCCCSSSCEEEEECTT-SCE---EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE
T ss_pred ccccccccccccccCCCcEEEEECCC-CCE---EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe
Confidence 11244444554 332 2334455667899999999988888888999999997 4444 11
Q ss_pred eecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 279 VSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.. .. +...+.+++++++|++.++
T Consensus 212 ~~-~~-------------~~~~p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 212 HF-TV-------------EPGKTDGLRVDAGGLIWAS 234 (296)
T ss_dssp EE-CC-------------SSSCCCSEEEBTTSCEEEE
T ss_pred Ee-eC-------------CCCCCCeEEECCCCCEEEE
Confidence 11 11 1124467888888876554
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=3.5e-11 Score=98.46 Aligned_cols=193 Identities=11% Similarity=-0.018 Sum_probs=134.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+.+.+++++.|+.+.+||.++++.+-.+..... .. ...+...|++ ++|++ .++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~---~~---~~~~~~~pdG------------------~ilvs--~~~~ 57 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG---WE---CNSVAATKAG------------------EILFS--YSKG 57 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTT---CC---CCEEEECTTS------------------CEEEE--CBSE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc---CC---CcCeEECCCC------------------CEEEe--CCCC
Confidence 456789999999999999989987655543210 01 1224455555 88883 4678
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccc-cccEEEEEeeeecCCCCCCCcEEEEEeC-CCcEEEEECCCcceeeee
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH-NSWITSISLAVLSSDSSNPQVLLVTGSS-DGSVRIWDGYIQELQKSA 173 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~ 173 (318)
|..||. +++ .+..+..+ ...+.++.+ .++|+++++.+. ++.|..+|. .++.+..+
T Consensus 58 V~~~d~-~G~--------------~~W~~~~~~~~~~~~~~~-------~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~ 114 (276)
T 3no2_A 58 AKMITR-DGR--------------ELWNIAAPAGCEMQTARI-------LPDGNALVAWCGHPSTILEVNM-KGEVLSKT 114 (276)
T ss_dssp EEEECT-TSC--------------EEEEEECCTTCEEEEEEE-------CTTSCEEEEEESTTEEEEEECT-TSCEEEEE
T ss_pred EEEECC-CCC--------------EEEEEcCCCCccccccEE-------CCCCCEEEEecCCCCEEEEEeC-CCCEEEEE
Confidence 999998 543 45555543 346888888 899999999887 778888876 67766665
Q ss_pred cccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC
Q 021036 174 EAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253 (318)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 253 (318)
...... ..+......+++. ++|+++++...++.|..| |.. ++ .+.++... ..+.++...++
T Consensus 115 ~~~~~~--------~~~~~~~~~v~~~-----~~G~~lv~~~~~~~v~~~--d~~-G~--~~w~~~~~-~~~~~~~~~~~ 175 (276)
T 3no2_A 115 EFETGI--------ERPHAQFRQINKN-----KKGNYLVPLFATSEVREI--APN-GQ--LLNSVKLS-GTPFSSAFLDN 175 (276)
T ss_dssp EECCSC--------SSGGGSCSCCEEC-----TTSCEEEEETTTTEEEEE--CTT-SC--EEEEEECS-SCCCEEEECTT
T ss_pred eccCCC--------CcccccccCceEC-----CCCCEEEEecCCCEEEEE--CCC-CC--EEEEEECC-CCccceeEcCC
Confidence 432110 0011133445666 899999999999999999 555 55 55566543 45667888999
Q ss_pred CCEEEEecCCCcEEEEEecCCce
Q 021036 254 GCCLYSCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 254 ~~~l~s~~~d~~v~iwd~~~~~~ 276 (318)
|..++++..++.|..+|..+++.
T Consensus 176 g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 176 GDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEeCCCCeEEEEeCcCCcE
Confidence 99999998888999999986554
No 180
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.45 E-value=4.9e-11 Score=100.24 Aligned_cols=189 Identities=8% Similarity=-0.055 Sum_probs=124.7
Q ss_pred cccccccCCCCCccEEEEecCC------------------------CcEEEEEccCCccccccccccCCceeEEeeec-c
Q 021036 72 KYPVPQNGSSNWFSILAVGGRS------------------------GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-A 126 (318)
Q Consensus 72 ~~~v~~~~~s~~~~~l~~g~~d------------------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 126 (318)
...+.+++++++|+++++...+ +.|.+||..+++ .+..+. +
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--------------~~~~~~~~ 88 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--------------ILQSSGKN 88 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--------------EEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--------------EEeccCCC
Confidence 3456667777777999888777 479999988754 233332 4
Q ss_pred ccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcc-eeeeecccccccccceeeeeecccceeEEEEeeccCC
Q 021036 127 HNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQE-LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS 205 (318)
Q Consensus 127 h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 205 (318)
+......+++ .++|+++++...++.|++||..... .+..+.....+- ....+......++++
T Consensus 89 ~~~~p~gia~-------d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g-----~~~~~~~~P~~ia~~----- 151 (329)
T 3fvz_A 89 LFYLPHGLSI-------DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPG-----SDQNHFCQPTDVAVE----- 151 (329)
T ss_dssp TCSSEEEEEE-------CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCC-----CSTTCCSSEEEEEEC-----
T ss_pred ccCCceEEEE-------CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCC-----CCccccCCCcEEEEe-----
Confidence 4457899999 8899988888889999999986442 333332110000 000122357889999
Q ss_pred C-CceEEEEEe-CCCcEEEeeeccCCCeeeEeeeeec----------ccCceeEEEEcCC-CCEEEEecCCCcEEEEEec
Q 021036 206 P-RLMLLAVGK-GSGSFDLWKCDISCNKFDKVGSYNA----------HDQVVTGLAWAFD-GCCLYSCSQDNFVRSWIFH 272 (318)
Q Consensus 206 ~-~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~ 272 (318)
| ++.++++.+ .++.|++| +. .++ .+..+.. +-.....++++|+ +.++++...++.|++||..
T Consensus 152 ~~~g~lyv~d~~~~~~I~~~--~~-~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 152 PSTGAVFVSDGYCNSRIVQF--SP-SGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp TTTCCEEEEECSSCCEEEEE--CT-TSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCeEEEEeCCCCCeEEEE--cC-CCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 8 788888886 69999999 43 333 2333321 2234789999998 7778888889999999998
Q ss_pred CCceeeeecCCCCCCccccccCCCcceeeeEEEEcC
Q 021036 273 GNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP 308 (318)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp 308 (318)
+++.......+ .+...+.+++|+|
T Consensus 227 ~G~~~~~~~~~------------~~~~~~~~~~~~p 250 (329)
T 3fvz_A 227 TKEFVREIKHA------------SFGRNVFAISYIP 250 (329)
T ss_dssp TCCEEEEECCT------------TTTTCEEEEEEET
T ss_pred CCcEEEEEecc------------ccCCCcceeeecC
Confidence 65544322111 1223566777777
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=4.3e-11 Score=111.09 Aligned_cols=207 Identities=10% Similarity=-0.001 Sum_probs=129.0
Q ss_pred ceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc------------
Q 021036 28 GNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK------------ 95 (318)
Q Consensus 28 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~------------ 95 (318)
+|++||+.+++..+.... ... ...++|+|++ +.|+.++.++.
T Consensus 152 ~i~v~d~~tg~~~~~~~~-----~~~---~~~~~wspDg------------------~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLE-----RVK---FSCMAWTHDG------------------KGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEETTTTEEEEEEEE-----EEC---SCCEEECTTS------------------SEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCCCccccc-----Ccc---cceEEEEeCC------------------CEEEEEEECCccccccccccccC
Confidence 899999998876442111 111 2238899888 88888777765
Q ss_pred ----EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC-----CCcEEEEECCC
Q 021036 96 ----VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS-----DGSVRIWDGYI 166 (318)
Q Consensus 96 ----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~ 166 (318)
|++|++.+++.. ...+.....|...+..+.| +++|++|+.++. +..|.+||+.+
T Consensus 206 ~~~~v~~~~l~t~~~~----------~~~v~~~~~~~~~~~~~~~-------SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSE----------DILCAEFPDEPKWMGGAEL-------SDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCEEEEEETTSCGGG----------CEEEECCTTCTTCEEEEEE-------CTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred CCCEEEEEECCCCccc----------ceEEeccCCCCeEEEEEEE-------cCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 999999876421 1122233345666889999 999999888765 56899999976
Q ss_pred ------cc-eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC----CcEEEeeeccCCCeeeEe
Q 021036 167 ------QE-LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS----GSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 167 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d----g~i~vw~~~~~~~~~~~~ 235 (318)
+. ....+..+. ..+.. .|+ ++|+.|+..+.. +.|.+| +..+......
T Consensus 269 ~~~~~~~~~~~~~l~~~~--------------~~~~~-~~s-----~dg~~l~~~s~~~~~~~~l~~~--d~~~~~~~~~ 326 (710)
T 2xdw_A 269 ESNGITGILKWVKLIDNF--------------EGEYD-YVT-----NEGTVFTFKTNRHSPNYRLINI--DFTDPEESKW 326 (710)
T ss_dssp SSSSSCSSCCCEEEECSS--------------SSCEE-EEE-----EETTEEEEEECTTCTTCEEEEE--ETTSCCGGGC
T ss_pred cccccCCccceEEeeCCC--------------CcEEE-EEe-----ccCCEEEEEECCCCCCCEEEEE--eCCCCCcccc
Confidence 42 233332222 12322 466 677766665543 347777 5544321112
Q ss_pred eeeecccC--ceeEEEEcCCCCEEEEecCCCc--EEEEEecCCc-eeeeecCCCCCCccccccCCCcceeeeEEEEcCCC
Q 021036 236 GSYNAHDQ--VVTGLAWAFDGCCLYSCSQDNF--VRSWIFHGNS-LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGN 310 (318)
Q Consensus 236 ~~~~~h~~--~v~~~~~~~~~~~l~s~~~d~~--v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 310 (318)
..+..|.. .+..++|++++.++++...|+. |.+|++.++. ...+... .+.+.+++++|++
T Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~---------------~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 327 KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE---------------VGSVVGYSGQKKD 391 (710)
T ss_dssp EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC---------------SSEEEEEECCTTC
T ss_pred eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC---------------CceEEEEecCCCC
Confidence 23444443 6788999988888888888885 5556664554 3333332 2367888899988
Q ss_pred cEEE
Q 021036 311 LVVA 314 (318)
Q Consensus 311 ~~l~ 314 (318)
..++
T Consensus 392 ~~l~ 395 (710)
T 2xdw_A 392 TEIF 395 (710)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 6555
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=5.5e-11 Score=99.88 Aligned_cols=213 Identities=8% Similarity=-0.037 Sum_probs=136.8
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
....++...++.+.+||..+++.+..+... . ....+++++++ +++++...++.|
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-----~---~p~~i~~~~~g------------------~lyv~~~~~~~v 107 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITGF-----T---SPRYIHFLSDE------------------KAYVTQIWDYRI 107 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECC-----S---SEEEEEEEETT------------------EEEEEEBSCSEE
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCCC-----C---CCcEEEEeCCC------------------eEEEEECCCCeE
Confidence 344566667899999999998876655311 1 12236666665 666665578999
Q ss_pred EEEEccCCccccccccccCCceeEEeeecccc-----ccEEEEEeeeecCCCCCCCcEEEEEe-CCCcEEEEECCCccee
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN-----SWITSISLAVLSSDSSNPQVLLVTGS-SDGSVRIWDGYIQELQ 170 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~ 170 (318)
.+||.++++ ....+.... .....+++ . +++++++.. .++.|.++|..+++..
T Consensus 108 ~~iD~~t~~--------------~~~~i~~g~~~~~~~~p~~i~~-------~-~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 108 FIINPKTYE--------------ITGYIECPDMDMESGSTEQMVQ-------Y-GKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEETTTTE--------------EEEEEECTTCCTTTCBCCCEEE-------E-TTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred EEEECCCCe--------------EEEEEEcCCccccCCCcceEEE-------E-CCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 999998854 333333211 13455666 2 344455544 4899999999998877
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC----------CcEEEeeeccCCCeeeEeeeeec
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS----------GSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d----------g~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
..+.... ....+.++ |+|++++++..+ +.|.++ |..+.+ ....+..
T Consensus 166 ~~i~~g~---------------~p~~i~~~-----~dG~l~v~~~~~~~~~~~~~~~~~v~~i--d~~t~~--v~~~~~~ 221 (328)
T 3dsm_A 166 DELTIGI---------------QPTSLVMD-----KYNKMWTITDGGYEGSPYGYEAPSLYRI--DAETFT--VEKQFKF 221 (328)
T ss_dssp EEEECSS---------------CBCCCEEC-----TTSEEEEEBCCBCTTCSSCBCCCEEEEE--ETTTTE--EEEEEEC
T ss_pred EEEEcCC---------------CccceEEc-----CCCCEEEEECCCccCCccccCCceEEEE--ECCCCe--EEEEEec
Confidence 6654322 34567888 899977777654 678888 666665 3333332
Q ss_pred c-cCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcC-CCcEEEE
Q 021036 241 H-DQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSP-GNLVVAM 315 (318)
Q Consensus 241 h-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~~ 315 (318)
. ......++|+|++++|+++.. .|.+||..+++......-+. ......+++++| ++.+.++
T Consensus 222 ~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~------------~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 222 KLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF------------RDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp CTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC------------CSSCEEEEEECTTTCCEEEE
T ss_pred CCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC------------CCCceEEEEEcCCCCeEEEE
Confidence 1 236789999999998877655 89999998776542221111 013568899998 4555444
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.42 E-value=1e-10 Score=95.08 Aligned_cols=179 Identities=8% Similarity=-0.037 Sum_probs=118.0
Q ss_pred cCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCCCCCcEEEEEeCC
Q 021036 78 NGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSSNPQVLLVTGSSD 156 (318)
Q Consensus 78 ~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d 156 (318)
++++++++++++.. ++.|.+|+...... ..+. .....+.++++ .++|+++++...+
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---------------~~~~~~~~~~p~~i~~-------~~~g~l~v~~~~~ 128 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---------------TVLPFDGLNYPEGLAV-------DTQGAVYVADRGN 128 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCC---------------EECCCCSCSSEEEEEE-------CTTCCEEEEEGGG
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceE---------------eeeecCCcCCCcceEE-------CCCCCEEEEECCC
Confidence 33344448766666 88999999875331 1121 22356889999 7888888887778
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
+.|.+|+..+......... ....+..++++ ++|+++++...++.|.+| +...... ..
T Consensus 129 ~~i~~~~~~~~~~~~~~~~--------------~~~~p~~i~~~-----~~g~l~v~~~~~~~i~~~--~~~~~~~--~~ 185 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLPFT--------------GLNDPDGVAVD-----NSGNVYVTDTDNNRVVKL--EAESNNQ--VV 185 (270)
T ss_dssp TEEEEECTTCCSCEECCCC--------------SCCSCCCEEEC-----TTCCEEEEEGGGTEEEEE--CTTTCCE--EE
T ss_pred CEEEEEECCCceeEeeccc--------------cCCCceeEEEe-----CCCCEEEEECCCCEEEEE--ecCCCce--Ee
Confidence 8999997654432221110 11246788998 889877777778899999 4444431 11
Q ss_pred eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
....+...+.+++++++|.++++...++.|.+|+..+......... +...+.+++++|+|+++++.
T Consensus 186 ~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~--------------~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 186 LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFT--------------GLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCC--------------SCSCEEEEEECTTCCEEEEE
T ss_pred ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccC--------------CCCCceeEEECCCCCEEEEE
Confidence 1222335678999999998888877889999999876544322111 11367899999999866653
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=3.6e-11 Score=98.34 Aligned_cols=150 Identities=11% Similarity=0.052 Sum_probs=110.5
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecccc-ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN-SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIW 162 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iw 162 (318)
+++|++++.|+.|.+||.++++ .+..+..+. ..++++.+ .++|++|+ +.++.|..|
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~--------------~~w~~~~~~~~~~~~~~~-------~pdG~ilv--s~~~~V~~~ 61 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKE--------------IVWEYPLEKGWECNSVAA-------TKAGEILF--SYSKGAKMI 61 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTE--------------EEEEEECCTTCCCCEEEE-------CTTSCEEE--ECBSEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCe--------------EEEEeCCCccCCCcCeEE-------CCCCCEEE--eCCCCEEEE
Confidence 5899999999999999998854 556666655 46788999 89999888 457889999
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC-CCcEEEeeeccCCCeeeEeeeee--
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG-SGSFDLWKCDISCNKFDKVGSYN-- 239 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~-- 239 (318)
|. +++.+..+.... ...+.++.+. ++|+++++.+. ++.|..+ +. +++ .+.++.
T Consensus 62 d~-~G~~~W~~~~~~-------------~~~~~~~~~~-----~dG~~lv~~~~~~~~v~~v--d~-~Gk--~l~~~~~~ 117 (276)
T 3no2_A 62 TR-DGRELWNIAAPA-------------GCEMQTARIL-----PDGNALVAWCGHPSTILEV--NM-KGE--VLSKTEFE 117 (276)
T ss_dssp CT-TSCEEEEEECCT-------------TCEEEEEEEC-----TTSCEEEEEESTTEEEEEE--CT-TSC--EEEEEEEC
T ss_pred CC-CCCEEEEEcCCC-------------CccccccEEC-----CCCCEEEEecCCCCEEEEE--eC-CCC--EEEEEecc
Confidence 99 788888776431 1246677887 99999999886 6666665 54 343 233332
Q ss_pred ----cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee
Q 021036 240 ----AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 240 ----~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 280 (318)
.+......+.+.++|.++++...++.|..||.....+.++.
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~ 162 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVK 162 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEE
Confidence 22234556788999999999999999999999844444443
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.39 E-value=9.2e-11 Score=99.02 Aligned_cols=190 Identities=12% Similarity=0.022 Sum_probs=116.2
Q ss_pred CCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC---Cc--EEEEE
Q 021036 26 SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS---GK--VSLWR 100 (318)
Q Consensus 26 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d---g~--i~iw~ 100 (318)
+..+.+||+.+++..+ + . .+..+.|+|++ +.|+..+.+ +. |.+|+
T Consensus 42 ~~~l~~~d~~~~~~~~-l--------~---~~~~~~~SpDg------------------~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I--------E---NATMPRISPDG------------------KKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp EEEEEEEETTTCCEEE-E--------E---SCEEEEECTTS------------------SEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEEEeCCCCceEE-c--------c---cCCCeEECCCC------------------CEEEEEEeccCCCcceEEEEE
Confidence 5567777877665311 1 1 13347888887 887776543 33 77777
Q ss_pred ccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC------------------------
Q 021036 101 ICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD------------------------ 156 (318)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d------------------------ 156 (318)
+.+++ ...... +.. +..+.| +++|+.|+.++.+
T Consensus 92 ~~~g~--------------~~~l~~-~~~-~~~~~w-------spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 92 LETLS--------------SKKILE-AKN-IRSLEW-------NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp TTTTE--------------EEEEEE-ESE-EEEEEE-------CTTSSEEEEEEECCCC---------CCCC--------
T ss_pred CCCCc--------------eEEEEc-CCC-ccceeE-------CCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 77644 222222 233 899999 8999988887642
Q ss_pred ---CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC-------cEEEeeec
Q 021036 157 ---GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG-------SFDLWKCD 226 (318)
Q Consensus 157 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg-------~i~vw~~~ 226 (318)
..|.+||+.+++....+.. . .+..+.|+ |+| +++++..++ ...+|.++
T Consensus 149 ~~~~~l~~~d~~~~~~~~~l~~---------------~-~~~~~~~s-----pdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 149 GEKTTFWIFDTESEEVIEEFEK---------------P-RFSSGIWH-----RDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp -CEEEEEEEETTTTEEEEEEEE---------------E-TTCEEEEE-----TTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred CccceEEEEECCCCeEEeeecC---------------C-CcccccCC-----CCe-EEEEEecccccccccccccEEEeC
Confidence 5788899987765333221 1 56788999 999 777776542 56777667
Q ss_pred cCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC--------CcEEEEEecCCceeeeecCCCCCCccccccCCCcc
Q 021036 227 ISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD--------NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAF 298 (318)
Q Consensus 227 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 298 (318)
+++... +..+ ..+..+ +|+|++|+.++.+ ..|.+|| ++....+... +.
T Consensus 207 --~~~~~~---l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~--------------~~ 262 (347)
T 2gop_A 207 --DGKEEK---MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDE--------------VD 262 (347)
T ss_dssp --TTEEEE---EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTT--------------CC
T ss_pred --CCceEE---eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEecccc--------------CC
Confidence 444322 3333 444444 9999988777644 3677777 4443322211 22
Q ss_pred eeeeE-EEEcCCCcEEEEE
Q 021036 299 VSCLG-MAVSPGNLVVAMV 316 (318)
Q Consensus 299 ~~v~~-v~~sp~~~~l~~~ 316 (318)
..+.. +.|+ |+ +++++
T Consensus 263 ~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp SEEEEEEEET-TE-EEEEE
T ss_pred cccCCccEEc-Cc-EEEEE
Confidence 35565 7787 77 55554
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=2.3e-11 Score=102.26 Aligned_cols=181 Identities=8% Similarity=-0.007 Sum_probs=119.6
Q ss_pred ccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 75 VPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
|.++.+++++..++..+.++.++.|. ......+..+...+.+++| ++++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~-------~~~g~l~~~~~ 63 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTIT-----------------AEPWLEISKKGLQLEGLNF-------DRQGQLFLLDV 63 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEE-----------------CEEEEEEESSCCCEEEEEE-------CTTSCEEEEET
T ss_pred cceeeecCCccceeEEeecccCcccc-----------------cceeEEEeccCccccCcEE-------CCCCCEEEEEC
Confidence 34444444446677667788899892 2244556666677899999 88999888888
Q ss_pred CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC----CcEEEeeeccCCC
Q 021036 155 SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS----GSFDLWKCDISCN 230 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d----g~i~vw~~~~~~~ 230 (318)
.++.|.+||..+++....... +...+.+++++ ++++++++...+ +.|.+| +..++
T Consensus 64 ~~~~i~~~d~~~~~~~~~~~~--------------~~~~~~~i~~~-----~dg~l~v~~~~~~~~~~~i~~~--d~~~~ 122 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKRPFVS--------------HKANPAAIKIH-----KDGRLFVCYLGDFKSTGGIFAA--TENGD 122 (333)
T ss_dssp TTCEEEEECTTTCCEEEEEEC--------------SSSSEEEEEEC-----TTSCEEEEECTTSSSCCEEEEE--CTTSC
T ss_pred CCCEEEEEeCCCCcEEEEeeC--------------CCCCcceEEEC-----CCCcEEEEeCCCCCCCceEEEE--eCCCC
Confidence 899999999987765433211 12368899998 899988877666 678888 55555
Q ss_pred eeeEeeeeecccCceeEEEEcCCCCEEEEecC------CCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEE
Q 021036 231 KFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ------DNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGM 304 (318)
Q Consensus 231 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 304 (318)
....+.....+...+..++++|+|+++++... .+.|..+|..++....+.... ..+.++
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---------------~~~~~i 187 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI---------------SVANGI 187 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE---------------SSEEEE
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC---------------Ccccce
Confidence 43222111124457899999999987776653 245555655544444332111 145789
Q ss_pred EEcCCCcEEEE
Q 021036 305 AVSPGNLVVAM 315 (318)
Q Consensus 305 ~~sp~~~~l~~ 315 (318)
+|+|||+.|..
T Consensus 188 ~~~~dg~~l~v 198 (333)
T 2dg1_A 188 ALSTDEKVLWV 198 (333)
T ss_dssp EECTTSSEEEE
T ss_pred EECCCCCEEEE
Confidence 99999875543
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=1.7e-10 Score=96.82 Aligned_cols=218 Identities=8% Similarity=-0.171 Sum_probs=136.5
Q ss_pred eCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEEccC
Q 021036 24 SKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICV 103 (318)
Q Consensus 24 s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~ 103 (318)
+.++++.++|..+++....+...... ...-.....+.+. + ++++++...++.|.+||.++
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~-~~lg~~~~~i~~~--~-----------------~~lyv~~~~~~~v~viD~~t 73 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANG-FKLGDVAQSMVIR--D-----------------GIGWIVVNNSHVIFAIDINT 73 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHS-SCCBSCEEEEEEE--T-----------------TEEEEEEGGGTEEEEEETTT
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcC-cccCccceEEEEE--C-----------------CEEEEEEcCCCEEEEEECcc
Confidence 45899999999998765554221100 0000001113332 1 25666677789999999998
Q ss_pred CccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccc
Q 021036 104 PKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLL 183 (318)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 183 (318)
++ .+..+. .......+++ +++++++++...++.|.+||..+++....+.....
T Consensus 74 ~~--------------~~~~i~-~~~~p~~i~~-------~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~----- 126 (328)
T 3dsm_A 74 FK--------------EVGRIT-GFTSPRYIHF-------LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDM----- 126 (328)
T ss_dssp CC--------------EEEEEE-CCSSEEEEEE-------EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-----
T ss_pred cE--------------EEEEcC-CCCCCcEEEE-------eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-----
Confidence 54 444453 2456788999 77786555555899999999998887765543220
Q ss_pred eeeeeecccceeEEEEeeccCCCCceEEEEEe-CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecC
Q 021036 184 KEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ 262 (318)
Q Consensus 184 ~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 262 (318)
.........+++. ++.++++.. .++.|.++ |..+++ .+.++.. ......+.++|+|++++++..
T Consensus 127 ----~~~~~~p~~i~~~------~~~lyv~~~~~~~~v~vi--D~~t~~--~~~~i~~-g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 127 ----DMESGSTEQMVQY------GKYVYVNCWSYQNRILKI--DTETDK--VVDELTI-GIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp ----CTTTCBCCCEEEE------TTEEEEEECTTCCEEEEE--ETTTTE--EEEEEEC-SSCBCCCEECTTSEEEEEBCC
T ss_pred ----cccCCCcceEEEE------CCEEEEEcCCCCCEEEEE--ECCCCe--EEEEEEc-CCCccceEEcCCCCEEEEECC
Confidence 0000123345554 455555544 48899999 666665 3444433 234578899999997777765
Q ss_pred C----------CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 263 D----------NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 263 d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+ +.|.++|..++++......+.. .....++|+||++.|.++
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-------------~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-------------DWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-------------CCCEEEEECTTSCEEEEE
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCC-------------CCceeEEEecCCCEEEEE
Confidence 4 7899999988776533222211 145899999998887654
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=1.2e-10 Score=107.83 Aligned_cols=212 Identities=7% Similarity=-0.058 Sum_probs=127.1
Q ss_pred eeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc-------
Q 021036 23 ASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK------- 95 (318)
Q Consensus 23 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~------- 95 (318)
|+.+.+|++||+.+++.+....... .+ ...++|+|++ +.|+.++.|..
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~~~~~--~~-----~~~~~wspDg------------------~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVDVIEG--GK-----YATPKWTPDS------------------KGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSCCBSC--CT-----TCCCEECTTS------------------SEEEEEECCCCTTSCGGG
T ss_pred CCceEEEEEEECCCCCCcCCcccCc--cc-----ccceEEecCC------------------CEEEEEEecCCCCCcccc
Confidence 4445789999999987641111111 00 0238888888 88888887766
Q ss_pred ------EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC----cEEEEECC
Q 021036 96 ------VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG----SVRIWDGY 165 (318)
Q Consensus 96 ------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~----~v~iwd~~ 165 (318)
|++|++.++... ..++.....|...+..+.| +++|++|+.++.++ .|.+|+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~----------~~lv~~~~~~~~~~~~~~~-------SpDG~~l~~~~~~~~~~~~l~~~~~~ 260 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSK----------DTVVHERTGDPTTFLQSDL-------SRDGKYLFVYILRGWSENDVYWKRPG 260 (695)
T ss_dssp GGGGCEEEEEETTSCGGG----------CEEEECCCCCTTCEEEEEE-------CTTSCCEEEEEEETTTEEEEEEECTT
T ss_pred CCCCCEEEEEECCCCchh----------ceEEEecCCCCEEEEEEEE-------CCCCCEEEEEEeCCCCceEEEEEcCC
Confidence 999999876421 1233344456678899999 99999988887666 67777654
Q ss_pred CcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe---CCCcEEEeeeccCCCeeeEeeeeecc-
Q 021036 166 IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK---GSGSFDLWKCDISCNKFDKVGSYNAH- 241 (318)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~h- 241 (318)
+++.. .+..+ ...+....+. +|.+++.+. .++.|.+| +..++.......+..+
T Consensus 261 ~~~~~-~l~~~--------------~~~~~~~~~~------~g~l~~~s~~~~~~~~l~~~--d~~~~~~~~~~~l~~~~ 317 (695)
T 2bkl_A 261 EKDFR-LLVKG--------------VGAKYEVHAW------KDRFYVLTDEGAPRQRVFEV--DPAKPARASWKEIVPED 317 (695)
T ss_dssp CSSCE-EEEEC--------------SSCCEEEEEE------TTEEEEEECTTCTTCEEEEE--BTTBCSGGGCEEEECCC
T ss_pred CCceE-EeecC--------------CCceEEEEec------CCcEEEEECCCCCCCEEEEE--eCCCCCccCCeEEecCC
Confidence 44322 22211 1133333443 455555544 25678888 4444331011223323
Q ss_pred -cCceeEEEEcCCCCEEEEecCCCcEEEEEec--CCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEE
Q 021036 242 -DQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH--GNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVA 314 (318)
Q Consensus 242 -~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~ 314 (318)
...+..++|+ ++.++++...|+..+||.+. ++....+.... .+.+..++++|+++.++
T Consensus 318 ~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~--------------~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 318 SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPG--------------VGAASNLMGLEDLDDAY 378 (695)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSS--------------SSEECCCBSCTTCSEEE
T ss_pred CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCC--------------CeEEEEeecCCCCCEEE
Confidence 4467888888 66788899999998888765 23233332221 13566777777776555
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=1.3e-09 Score=90.04 Aligned_cols=218 Identities=10% Similarity=0.001 Sum_probs=131.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
....+++....+.|..||..+++. ..+. ... .+.+++++|++ +++++. ++.
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-----~~~---~~~~i~~~~dG------------------~l~v~~--~~~ 74 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQV-QRVT-----MDA---PVSSVALRQSG------------------GYVATI--GTK 74 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCE-EEEE-----CSS---CEEEEEEBTTS------------------SEEEEE--TTE
T ss_pred CCEEEEEECCCCEEEEEECCCCcE-EEEe-----CCC---ceEEEEECCCC------------------CEEEEE--CCe
Confidence 334456666678888888876543 1111 111 13346666666 765543 567
Q ss_pred EEEEEccCCccccccccccCCceeEEeeecc--ccccEEEEEeeeecCCCCCCCcEEEEEeCC---------CcEEEEEC
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQA--HNSWITSISLAVLSSDSSNPQVLLVTGSSD---------GSVRIWDG 164 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d---------~~v~iwd~ 164 (318)
|.+||.++++. +.+..... ....++.+++ .++|+++++...+ ..-.+|.+
T Consensus 75 l~~~d~~~g~~------------~~~~~~~~~~~~~~~~di~~-------d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~ 135 (297)
T 3g4e_A 75 FCALNWKEQSA------------VVLATVDNDKKNNRFNDGKV-------DPAGRYFAGTMAEETAPAVLERHQGALYSL 135 (297)
T ss_dssp EEEEETTTTEE------------EEEEECCTTCSSEEEEEEEE-------CTTSCEEEEEEECCSBTTBCCTTCEEEEEE
T ss_pred EEEEECCCCcE------------EEEEecCCCCCCCCCCCEEE-------CCCCCEEEecCCcccccccccCCCcEEEEE
Confidence 99999987542 22222111 1245789999 8899877765322 23455554
Q ss_pred CC-cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEE-EEeCCCcEEEeeeccCCCeee---Eeeeee
Q 021036 165 YI-QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLA-VGKGSGSFDLWKCDISCNKFD---KVGSYN 239 (318)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~-~~~~dg~i~vw~~~~~~~~~~---~~~~~~ 239 (318)
.. ++...... .....+.++|+ |+++.++ +.+.++.|.+|+++..++... ....+.
T Consensus 136 d~~g~~~~~~~---------------~~~~pngi~~s-----pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 136 FPDHHVKKYFD---------------QVDISNGLDWS-----LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp CTTSCEEEEEE---------------EESBEEEEEEC-----TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred ECCCCEEEEee---------------ccccccceEEc-----CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC
Confidence 42 22221111 11245789999 8997664 555678899997765555432 223333
Q ss_pred cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc-CCCcEEEE
Q 021036 240 AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS-PGNLVVAM 315 (318)
Q Consensus 240 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-p~~~~l~~ 315 (318)
.+...+..++++++|.+.++...++.|..||..+++.......+. ..+++++|. ||++.|..
T Consensus 196 ~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~--------------~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 196 KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV--------------DKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--------------SBEEEEEEESGGGCEEEE
T ss_pred CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--------------CCceEEEEeCCCCCEEEE
Confidence 344667899999999888877778889999998666543332221 267999998 88765543
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.33 E-value=1.2e-09 Score=98.05 Aligned_cols=202 Identities=12% Similarity=0.031 Sum_probs=134.2
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVS 97 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 97 (318)
...++.+.++++.++|..+++.+..+...... ..+.++|++ +++++++.|+.|.
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p--------~~v~~SpDG------------------r~lyv~~~dg~V~ 221 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV--------HISRLSASG------------------RYLFVIGRDGKVN 221 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCE--------EEEEECTTS------------------CEEEEEETTSEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCc--------cceEECCCC------------------CEEEEEcCCCeEE
Confidence 34577788999999999998876665432211 126667766 9999999999999
Q ss_pred EEEcc--CCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCC----CCCcEEEEEeC-CCcEEEEECCCccee
Q 021036 98 LWRIC--VPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS----NPQVLLVTGSS-DGSVRIWDGYIQELQ 170 (318)
Q Consensus 98 iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~----~~~~~l~s~~~-d~~v~iwd~~~~~~~ 170 (318)
+||+. +. +.+..+.... ....++| + ++|++++++.. +++|.++|..+.+.+
T Consensus 222 viD~~~~t~--------------~~v~~i~~G~-~P~~ia~-------s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 222 MIDLWMKEP--------------TTVAEIKIGS-EARSIET-------SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp EEETTSSSC--------------CEEEEEECCS-EEEEEEE-------CCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred EEECCCCCC--------------cEeEEEecCC-CCceeEE-------ccccCCCCCEEEEEEccCCeEEEEECCCCcEE
Confidence 99995 43 3445554433 3578999 6 68988887775 599999999998888
Q ss_pred eeecccccccccceeeeeec-ccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEE
Q 021036 171 KSAEAHCVPFSLLKEVVTVN-TVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGL 248 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 248 (318)
..+......+.. ...| ...+..+..+ +++ .+++....+|.|.++| ....+...+..+. .......+
T Consensus 280 ~~i~~~~~~~~~----~~~~p~~rva~i~~s-----~~~~~~vv~~~~~g~v~~vd--~~~~~~~~v~~i~-~~~~~~d~ 347 (567)
T 1qks_A 280 KIQSTRGMTYDE----QEYHPEPRVAAILAS-----HYRPEFIVNVKETGKILLVD--YTDLNNLKTTEIS-AERFLHDG 347 (567)
T ss_dssp EEEECCEECTTT----CCEESCCCEEEEEEC-----SSSSEEEEEETTTTEEEEEE--TTCSSEEEEEEEE-CCSSEEEE
T ss_pred EEEecccccccc----ccccCCCceEEEEEc-----CCCCEEEEEecCCCeEEEEe--cCCCccceeeeee-ccccccCc
Confidence 776543211100 0001 1145667777 554 4555556678888884 4443221333332 33456788
Q ss_pred EEcCCCCEEEEe-cCCCcEEEEEecCCceeee
Q 021036 249 AWAFDGCCLYSC-SQDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 249 ~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~ 279 (318)
.|+|+|++++++ ..++.|.++|+.++++...
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 999999987655 4678999999998876543
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.33 E-value=2.2e-10 Score=96.66 Aligned_cols=150 Identities=10% Similarity=0.048 Sum_probs=92.7
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC-------cEEEEECCC
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG-------SVRIWDGYI 166 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~-------~v~iwd~~~ 166 (318)
..|.+|++.+++ .++.+.. . .+..+.| +++| +++++..++ ...||.+.+
T Consensus 152 ~~l~~~d~~~~~--------------~~~~l~~-~-~~~~~~~-------spdg-~~~~~~~~~~~~~~~~~~~l~~~d~ 207 (347)
T 2gop_A 152 TTFWIFDTESEE--------------VIEEFEK-P-RFSSGIW-------HRDK-IVVNVPHREIIPQYFKFWDIYIWED 207 (347)
T ss_dssp EEEEEEETTTTE--------------EEEEEEE-E-TTCEEEE-------ETTE-EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred ceEEEEECCCCe--------------EEeeecC-C-CcccccC-------CCCe-EEEEEecccccccccccccEEEeCC
Confidence 568889988754 2122333 3 6788999 8899 777776542 344554443
Q ss_pred cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC--------cEEEeeeccCCCeeeEeeee
Q 021036 167 QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG--------SFDLWKCDISCNKFDKVGSY 238 (318)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg--------~i~vw~~~~~~~~~~~~~~~ 238 (318)
++. ..+.. + ..+..+ + |+|+.|+.++.++ .|.+| + +++ .....
T Consensus 208 ~~~-~~l~~--------------~-~~~~~~--s-----pdg~~l~~~~~~~~~~~~~~~~l~~~--d--~~~--~~~l~ 258 (347)
T 2gop_A 208 GKE-EKMFE--------------K-VSFYAV--D-----SDGERILLYGKPEKKYMSEHNKLYIY--D--GKE--VMGIL 258 (347)
T ss_dssp TEE-EEEEE--------------E-ESEEEE--E-----ECSSCEEEEECCSSSCCCSSCEEEEE--C--SSC--EEESS
T ss_pred Cce-EEecc--------------C-cceeeE--C-----CCCCEEEEEEccccCCccccceEEEE--C--CCc--eEecc
Confidence 332 22211 1 233333 6 8999887776443 46666 5 443 22223
Q ss_pred ecccCceeE-EEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 239 NAHDQVVTG-LAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 239 ~~h~~~v~~-~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
..+...+.. +.|+ ++ ++++++.++.++|| +.++....+... ...|.+++|+| .+++++
T Consensus 259 ~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~---------------~~~v~~~~~s~--~~~~~~ 317 (347)
T 2gop_A 259 DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKG---------------RHWIMGFDVDE--IVVYLK 317 (347)
T ss_dssp TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECS---------------SSEEEEEEESS--SEEEEE
T ss_pred ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecC---------------CCeEEeeeeeC--cEEEEE
Confidence 455677886 8999 88 88999999999999 875544333222 13788999999 455443
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.32 E-value=9.9e-10 Score=93.39 Aligned_cols=126 Identities=10% Similarity=-0.001 Sum_probs=93.7
Q ss_pred CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEE
Q 021036 83 WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIW 162 (318)
Q Consensus 83 ~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iw 162 (318)
++++|+++ .++.|++||+.+-. .......|..++.++.+ .+.. +++++.||.|.+|
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~--------------~~~~~~~~~~~v~~i~~-------~~p~--~av~~~dG~L~v~ 151 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELS--------------EFRTVTSFEKPVFQLKN-------VNNT--LVILNSVNDLSAL 151 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTT--------------CEEEEEECSSCEEEEEE-------CSSE--EEEEETTSEEEEE
T ss_pred CCCEEEEE-cCCcEEEEEchhhh--------------ccCccceeecceeeEEe-------cCCC--EEEEECCCCEEEE
Confidence 45899998 88999999998743 22334566777888887 3332 8889999999999
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee----
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY---- 238 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~---- 238 (318)
|+.+++.... ...|++++|+ |+| ++.|..||++++|+.+ ........++
T Consensus 152 dl~~~~~~~~------------------~~~Vs~v~WS-----pkG--~~vg~~dg~i~~~~~~--~~~~~~k~~I~~Pp 204 (388)
T 1xip_A 152 DLRTKSTKQL------------------AQNVTSFDVT-----NSQ--LAVLLKDRSFQSFAWR--NGEMEKQFEFSLPS 204 (388)
T ss_dssp ETTTCCEEEE------------------EESEEEEEEC-----SSE--EEEEETTSCEEEEEEE--TTEEEEEEEECCCH
T ss_pred EccCCccccc------------------cCCceEEEEc-----CCc--eEEEEcCCcEEEEcCC--CccccccceecCCc
Confidence 9997765431 1279999999 888 6789999999999543 4432112233
Q ss_pred --e---cccCceeEEEEcCCCCEEEE
Q 021036 239 --N---AHDQVVTGLAWAFDGCCLYS 259 (318)
Q Consensus 239 --~---~h~~~v~~~~~~~~~~~l~s 259 (318)
. +|...|.++.|.+++.++++
T Consensus 205 ~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 205 ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ccccccCCCeeEEEEEEecCCeEEEE
Confidence 2 37788999999999988876
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=2.5e-10 Score=105.99 Aligned_cols=188 Identities=7% Similarity=-0.118 Sum_probs=116.0
Q ss_pred ccccCCCCCccEEEEecCCC-----cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcE
Q 021036 75 VPQNGSSNWFSILAVGGRSG-----KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
+....+||+|++||.+..++ .|++||+.+++. ...... ...+..++| +++|+.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~--------------~~~~~~-~~~~~~~~w-------spDg~~ 184 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE--------------LPDVLE-RVKFSCMAW-------THDGKG 184 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE--------------EEEEEE-EECSCCEEE-------CTTSSE
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--------------Cccccc-CcccceEEE-------EeCCCE
Confidence 34444444458888765433 899999998653 221111 123677999 999999
Q ss_pred EEEEeCCCc----------------EEEEECCCccee--eeecccccccccceeeeeecccceeEEEEeeccCCCCceEE
Q 021036 150 LVTGSSDGS----------------VRIWDGYIQELQ--KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLL 211 (318)
Q Consensus 150 l~s~~~d~~----------------v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l 211 (318)
|+.++.++. |++|++.+++.. ..+.... +...+..+.|+ |+|++|
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~------------~~~~~~~~~~S-----pDg~~l 247 (710)
T 2xdw_A 185 MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD------------EPKWMGGAELS-----DDGRYV 247 (710)
T ss_dssp EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT------------CTTCEEEEEEC-----TTSCEE
T ss_pred EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC------------CCeEEEEEEEc-----CCCCEE
Confidence 999988766 999999876532 1111111 12245678898 999988
Q ss_pred EEEeC-----CCcEEEeeeccCC----CeeeEeeeeecccCceeEEEEcCCCCEEEEecCC----CcEEEEEecCCc---
Q 021036 212 AVGKG-----SGSFDLWKCDISC----NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD----NFVRSWIFHGNS--- 275 (318)
Q Consensus 212 ~~~~~-----dg~i~vw~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~--- 275 (318)
+.++. +..|++|+++... +.. ....+..+...+.. .|+|+|..|+..+.+ +.|.+||+.++.
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 325 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK 325 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG
T ss_pred EEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc
Confidence 88764 5678888543200 210 22344555555554 488998877655543 369999987753
Q ss_pred eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 276 LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
...+..+... ..+.+++|++++.++++.
T Consensus 326 ~~~l~~~~~~-------------~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 326 WKVLVPEHEK-------------DVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CEEEECCCSS-------------CEEEEEEEETTTEEEEEE
T ss_pred ceeccCCCCC-------------CeEEEEEEEcCCEEEEEE
Confidence 2333222211 257788888777777665
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.30 E-value=7.5e-09 Score=85.06 Aligned_cols=181 Identities=8% Similarity=-0.059 Sum_probs=120.3
Q ss_pred ccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC
Q 021036 77 QNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD 156 (318)
Q Consensus 77 ~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d 156 (318)
++.+++++.++++...++.|..|+.+ ++ .... .+......+.++.+ .+++.++++...+
T Consensus 61 ~i~~~~~g~l~v~~~~~~~i~~~~~~-g~------------~~~~-~~~~~~~~~~~i~~-------~~~g~l~v~~~~~ 119 (299)
T 2z2n_A 61 CLTISSDGEVWFTENAANKIGRITKK-GI------------IKEY-TLPNPDSAPYGITE-------GPNGDIWFTEMNG 119 (299)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SC------------EEEE-ECSSTTCCEEEEEE-------CTTSCEEEEETTT
T ss_pred eEEECCCCCEEEeCCCCCeEEEECCC-Cc------------EEEE-eCCCcCCCceeeEE-------CCCCCEEEEecCC
Confidence 33444445888887778889999876 22 1111 12224457899999 7888888887778
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
+.|..||. +++...... . .....+..++++ +++.++++...++.|..| +. +++....
T Consensus 120 ~~i~~~d~-~g~~~~~~~-~------------~~~~~~~~i~~~-----~~g~l~v~~~~~~~i~~~--~~-~g~~~~~- 176 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYEL-P------------NKGSYPSFITLG-----SDNALWFTENQNNAIGRI--TE-SGDITEF- 176 (299)
T ss_dssp TEEEEECT-TCCEEEEEC-S------------STTCCEEEEEEC-----TTSCEEEEETTTTEEEEE--CT-TCCEEEE-
T ss_pred ceEEEECC-CCCEEEecC-C------------CCCCCCceEEEc-----CCCCEEEEeCCCCEEEEE--cC-CCcEEEe-
Confidence 89999998 444332111 0 012357888998 899888877777889988 55 4443221
Q ss_pred eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
........+.+++++++|.++++...++.|.+||. ++....+.... +...+.+++++++|++.++
T Consensus 177 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-------------~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 177 KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPT-------------PNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSS-------------TTCCEEEEEECSTTCEEEE
T ss_pred eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCC-------------CCCCceeEEECCCCCEEEe
Confidence 12234456789999999997777777889999998 65554432221 1236789999999886655
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.28 E-value=1.8e-10 Score=106.67 Aligned_cols=187 Identities=7% Similarity=-0.110 Sum_probs=112.7
Q ss_pred cccccCCCCCccEEE-----EecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc
Q 021036 74 PVPQNGSSNWFSILA-----VGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV 148 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~-----~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 148 (318)
.+....+||+|++|| .|+.+..|++||+.+++... ...+.. .....++| +++|+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~------------~~~~~~--~~~~~~~w-------spDg~ 180 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK------------VDVIEG--GKYATPKW-------TPDSK 180 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS------------SCCBSC--CTTCCCEE-------CTTSS
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC------------CcccCc--ccccceEE-------ecCCC
Confidence 334444444448888 45556789999999875310 001111 11267899 99999
Q ss_pred EEEEEeCCCc-------------EEEEECCCccee--eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEE
Q 021036 149 LLVTGSSDGS-------------VRIWDGYIQELQ--KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAV 213 (318)
Q Consensus 149 ~l~s~~~d~~-------------v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~ 213 (318)
.|+.++.|.. |++|++.+++.. ..+... .+...+..+.|+ |+|++|+.
T Consensus 181 ~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~------------~~~~~~~~~~~S-----pDG~~l~~ 243 (695)
T 2bkl_A 181 GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT------------GDPTTFLQSDLS-----RDGKYLFV 243 (695)
T ss_dssp EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC------------CCTTCEEEEEEC-----TTSCCEEE
T ss_pred EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC------------CCCEEEEEEEEC-----CCCCEEEE
Confidence 9999998776 999999877532 111111 122356788898 99998888
Q ss_pred EeCCC--cEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEec---CCCcEEEEEecCCce---eeeecCCCC
Q 021036 214 GKGSG--SFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCS---QDNFVRSWIFHGNSL---SQVSIPTNT 285 (318)
Q Consensus 214 ~~~dg--~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~~~~---~~~~~~~~~ 285 (318)
++.++ ...+|-++..++.. ..+..+...+....| ++|.+++... .++.|.+||+.++.. ..+..+..
T Consensus 244 ~~~~~~~~~~l~~~~~~~~~~---~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~- 318 (695)
T 2bkl_A 244 YILRGWSENDVYWKRPGEKDF---RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS- 318 (695)
T ss_dssp EEEETTTEEEEEEECTTCSSC---EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-
T ss_pred EEeCCCCceEEEEEcCCCCce---EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC-
Confidence 77655 34444335544443 234445555666666 5665444444 357899999877542 33322211
Q ss_pred CCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 286 PGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 286 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
...+.+++|+ ++.++++.
T Consensus 319 ------------~~~l~~~~~~-~~~lv~~~ 336 (695)
T 2bkl_A 319 ------------SASLLSVSIV-GGHLSLEY 336 (695)
T ss_dssp ------------SCEEEEEEEE-TTEEEEEE
T ss_pred ------------CCeEEEEEEE-CCEEEEEE
Confidence 1256777887 56666654
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=6e-09 Score=90.10 Aligned_cols=195 Identities=13% Similarity=0.014 Sum_probs=116.3
Q ss_pred ccEEEEecCCC--cEEEEEccCCccccccccccCCceeEEeeecc-ccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEE
Q 021036 84 FSILAVGGRSG--KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA-HNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVR 160 (318)
Q Consensus 84 ~~~l~~g~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~ 160 (318)
++.|+++..++ .|.+++...+... ..+..+.. ....+.++++ ++++..|+.+..++.|+
T Consensus 182 g~~l~~~d~~~~~~I~~~d~~~~~~~-----------~~~g~~~~~~~~~p~~iav-------~p~~g~lyv~d~~~~I~ 243 (409)
T 3hrp_A 182 KQRVYSIGWEGTHTVYVYMKASGWAP-----------TRIGQLGSTFSGKIGAVAL-------DETEEWLYFVDSNKNFG 243 (409)
T ss_dssp SSEEEEEBSSTTCEEEEEEGGGTTCE-----------EEEEECCTTSCSCCCBCEE-------CTTSSEEEEECTTCEEE
T ss_pred CCcEEEEecCCCceEEEEEcCCCcee-----------EEeeeccchhcCCcEEEEE-------eCCCCeEEEEECCCcEE
Confidence 38888887766 6888887654311 11111112 4456788999 77333444477788999
Q ss_pred EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeeeccCCCeeeEeeeee
Q 021036 161 IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN 239 (318)
Q Consensus 161 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 239 (318)
.||..++.... +...... . .....|.+.++++ | ++.++++...++.|+.|+.+ ... ..+.
T Consensus 244 ~~d~~~~~~~~-~~~~~~~-----g--~~~~~P~~~ia~~-----p~~g~lyv~d~~~~~I~~~~~~--g~~----~~~~ 304 (409)
T 3hrp_A 244 RFNVKTQEVTL-IKQLELS-----G--SLGTNPGPYLIYY-----FVDSNFYMSDQNLSSVYKITPD--GEC----EWFC 304 (409)
T ss_dssp EEETTTCCEEE-EEECCCC-----S--CCCCSSCCEEEEE-----TTTTEEEEEETTTTEEEEECTT--CCE----EEEE
T ss_pred EEECCCCCEEE-Eeccccc-----C--CCCCCccccEEEe-----CCCCEEEEEeCCCCEEEEEecC--CCE----EEEE
Confidence 99998765322 1100000 0 0000112389999 7 57777777788889998533 321 1222
Q ss_pred cc---------------cCceeEEEEcCCCCEEEEec-CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeE
Q 021036 240 AH---------------DQVVTGLAWAFDGCCLYSCS-QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLG 303 (318)
Q Consensus 240 ~h---------------~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 303 (318)
++ -.....++++|+|.++++-. .++.|+.|++.++.+..+...+...................+
T Consensus 305 g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~g 384 (409)
T 3hrp_A 305 GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYD 384 (409)
T ss_dssp ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEE
T ss_pred eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceE
Confidence 22 13478999999999888877 889999999877777666554221100000011122346789
Q ss_pred EEEcCCCcEEEE
Q 021036 304 MAVSPGNLVVAM 315 (318)
Q Consensus 304 v~~sp~~~~l~~ 315 (318)
++++|+|.++++
T Consensus 385 iavd~~g~lyVa 396 (409)
T 3hrp_A 385 ICYDGEGGYWIA 396 (409)
T ss_dssp EEECSSSEEEEE
T ss_pred EEEcCCCCEEEE
Confidence 999999876665
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.26 E-value=6.4e-10 Score=90.32 Aligned_cols=180 Identities=11% Similarity=-0.024 Sum_probs=114.7
Q ss_pred cCCCCCccEEE-EecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC
Q 021036 78 NGSSNWFSILA-VGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD 156 (318)
Q Consensus 78 ~~~s~~~~~l~-~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d 156 (318)
+.+++++++++ +...++.|.+|+..+... ......+...+.++++ .++++++++.. +
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~--------------~~~~~~~~~~p~~i~~-------~~~g~l~v~~~-~ 86 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGT--------------TVLPFNGLYQPQGLAV-------DGAGTVYVTDF-N 86 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-------------------EECCCCSCCSCCCEEE-------CTTCCEEEEET-T
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCccc--------------ceEeeCCcCCcceeEE-------CCCCCEEEEcC-C
Confidence 34444448777 557789999998765321 1111223346788999 78888666665 8
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
+.|.+||....... .+... ....+..++++ ++|+++++...++.|.+| +..+.. ...
T Consensus 87 ~~i~~~d~~~~~~~-~~~~~-------------~~~~p~~i~~~-----~~g~l~v~~~~~~~i~~~--~~~~~~--~~~ 143 (270)
T 1rwi_B 87 NRVVTLAAGSNNQT-VLPFD-------------GLNYPEGLAVD-----TQGAVYVADRGNNRVVKL--AAGSKT--QTV 143 (270)
T ss_dssp TEEEEECTTCSCCE-ECCCC-------------SCSSEEEEEEC-----TTCCEEEEEGGGTEEEEE--CTTCCS--CEE
T ss_pred CEEEEEeCCCceEe-eeecC-------------CcCCCcceEEC-----CCCCEEEEECCCCEEEEE--ECCCce--eEe
Confidence 89999998765432 22111 11256789998 899988887778899998 433332 111
Q ss_pred eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
........+.+++++++|+++++...++.|.+||..+.......... ...+.+++++++|.+.++.
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--------------~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD--------------ITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS--------------CCSEEEEEECTTCCEEEEE
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC--------------CCCceEEEECCCCCEEEEE
Confidence 11223345788999999998777777889999998775544322111 1256889999998766553
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.25 E-value=7.9e-09 Score=84.93 Aligned_cols=185 Identities=8% Similarity=-0.014 Sum_probs=123.1
Q ss_pred cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
.+.++.++++|+++++...++.|.+|+.. ++. .. .....+...+.++++ .+++.++++.
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~------------~~-~~~~~~~~~~~~i~~-------~~~g~l~v~~ 74 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKI------------TE-YPLPTPDAKVMCLTI-------SSDGEVWFTE 74 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCE------------EE-EECSSTTCCEEEEEE-------CTTSCEEEEE
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCe------------EE-ecCCcccCceeeEEE-------CCCCCEEEeC
Confidence 34445555555888877778899999987 431 11 112234567899999 8888888887
Q ss_pred eCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeee
Q 021036 154 SSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFD 233 (318)
Q Consensus 154 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 233 (318)
..++.|..||.. ++. ..+... .....+..++++ +++.++++...++.|..| +. +++..
T Consensus 75 ~~~~~i~~~~~~-g~~-~~~~~~------------~~~~~~~~i~~~-----~~g~l~v~~~~~~~i~~~--d~-~g~~~ 132 (299)
T 2z2n_A 75 NAANKIGRITKK-GII-KEYTLP------------NPDSAPYGITEG-----PNGDIWFTEMNGNRIGRI--TD-DGKIR 132 (299)
T ss_dssp TTTTEEEEECTT-SCE-EEEECS------------STTCCEEEEEEC-----TTSCEEEEETTTTEEEEE--CT-TCCEE
T ss_pred CCCCeEEEECCC-CcE-EEEeCC------------CcCCCceeeEEC-----CCCCEEEEecCCceEEEE--CC-CCCEE
Confidence 778899999976 332 222111 012357788998 889888887778889998 44 33322
Q ss_pred EeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEE
Q 021036 234 KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVV 313 (318)
Q Consensus 234 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 313 (318)
.. ........+..++++++|.++++...++.|..||. ++....+..... ...+.+++++++|.+.
T Consensus 133 ~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-------------~~~~~~i~~~~~g~l~ 197 (299)
T 2z2n_A 133 EY-ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTP-------------ASGPVGITKGNDDALW 197 (299)
T ss_dssp EE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-------------TCCEEEEEECTTSSEE
T ss_pred Ee-cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCC-------------CCcceeEEECCCCCEE
Confidence 21 22234456889999999988887777889999998 655544322211 1256789999988766
Q ss_pred EEE
Q 021036 314 AMV 316 (318)
Q Consensus 314 ~~~ 316 (318)
++.
T Consensus 198 v~~ 200 (299)
T 2z2n_A 198 FVE 200 (299)
T ss_dssp EEE
T ss_pred EEc
Confidence 553
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.23 E-value=1e-08 Score=85.93 Aligned_cols=173 Identities=10% Similarity=0.006 Sum_probs=103.7
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecc--ccccEEEEEeeeecCCCCCCCcEEEEEeC------C
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA--HNSWITSISLAVLSSDSSNPQVLLVTGSS------D 156 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~l~s~~~------d 156 (318)
+++++. .+ .|.+||.++++. ..+..... ....++++.+ +++|+++++... .
T Consensus 102 ~l~v~~-~~-gl~~~d~~~g~~------------~~~~~~~~~~~~~~~~~i~~-------d~~G~l~v~~~~~~~~~~~ 160 (326)
T 2ghs_A 102 KQLIAS-DD-GLFLRDTATGVL------------TLHAELESDLPGNRSNDGRM-------HPSGALWIGTMGRKAETGA 160 (326)
T ss_dssp EEEEEE-TT-EEEEEETTTCCE------------EEEECSSTTCTTEEEEEEEE-------CTTSCEEEEEEETTCCTTC
T ss_pred eEEEEE-CC-CEEEEECCCCcE------------EEEeeCCCCCCCCCCCCEEE-------CCCCCEEEEeCCCcCCCCc
Confidence 776654 44 489999887652 12211111 1246889999 888987776542 2
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEE-eCCCcEEEeeeccCCC-ee--
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG-KGSGSFDLWKCDISCN-KF-- 232 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~-~~-- 232 (318)
+.|..++ +++... +.. .....+.++|+ |+++.++.+ +.++.|.+|+++..++ ..
T Consensus 161 ~~l~~~~--~g~~~~-~~~--------------~~~~~~~i~~s-----~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~ 218 (326)
T 2ghs_A 161 GSIYHVA--KGKVTK-LFA--------------DISIPNSICFS-----PDGTTGYFVDTKVNRLMRVPLDARTGLPTGK 218 (326)
T ss_dssp EEEEEEE--TTEEEE-EEE--------------EESSEEEEEEC-----TTSCEEEEEETTTCEEEEEEBCTTTCCBSSC
T ss_pred eEEEEEe--CCcEEE-eeC--------------CCcccCCeEEc-----CCCCEEEEEECCCCEEEEEEcccccCCcccC
Confidence 3455555 343221 110 11245688998 899766554 5578899996542233 21
Q ss_pred -eEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc-CCC
Q 021036 233 -DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS-PGN 310 (318)
Q Consensus 233 -~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-p~~ 310 (318)
+....+......+..++++++|.++++...++.|.+||..+.....+.... ..+.+++|+ |++
T Consensus 219 ~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~---------------~~~~~~af~g~d~ 283 (326)
T 2ghs_A 219 AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPG---------------KQTTCPAFIGPDA 283 (326)
T ss_dssp CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSC---------------SBEEEEEEESTTS
T ss_pred ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCC---------------CCcEEEEEecCCC
Confidence 122223233455678999999987777666788999998544333333222 267899998 887
Q ss_pred cEEEE
Q 021036 311 LVVAM 315 (318)
Q Consensus 311 ~~l~~ 315 (318)
..|..
T Consensus 284 ~~L~v 288 (326)
T 2ghs_A 284 SRLLV 288 (326)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 76543
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.20 E-value=7e-09 Score=93.12 Aligned_cols=177 Identities=7% Similarity=-0.062 Sum_probs=122.2
Q ss_pred CCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEE
Q 021036 82 NWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRI 161 (318)
Q Consensus 82 ~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~i 161 (318)
+.+.++++...++.|.++|..+++ .+..+.. ...+..+.+ +++|+++++++.|+.|.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~--------------v~~~i~~-g~~p~~v~~-------SpDGr~lyv~~~dg~V~v 222 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYE--------------IKTVLDT-GYAVHISRL-------SASGRYLFVIGRDGKVNM 222 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCC--------------EEEEEEC-SSCEEEEEE-------CTTSCEEEEEETTSEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCe--------------EEEEEeC-CCCccceEE-------CCCCCEEEEEcCCCeEEE
Confidence 344677778889999999999854 4445543 335678999 999999999999999999
Q ss_pred EECC--CcceeeeecccccccccceeeeeecccceeEEEEeeccCC---CCceEEEEEe-CCCcEEEeeeccCCCeeeEe
Q 021036 162 WDGY--IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQS---PRLMLLAVGK-GSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 162 wd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~---~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~ 235 (318)
||+. +++.+..+.... ....++++ + |+|+++++++ .++.|.++ |..+.+ .+
T Consensus 223 iD~~~~t~~~v~~i~~G~---------------~P~~ia~s----~~~~pDGk~l~v~n~~~~~v~Vi--D~~t~~--~~ 279 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIGS---------------EARSIETS----KMEGWEDKYAIAGAYWPPQYVIM--DGETLE--PK 279 (567)
T ss_dssp EETTSSSCCEEEEEECCS---------------EEEEEEEC----CSTTCTTTEEEEEEEETTEEEEE--ETTTCC--EE
T ss_pred EECCCCCCcEeEEEecCC---------------CCceeEEc----cccCCCCCEEEEEEccCCeEEEE--ECCCCc--EE
Confidence 9996 666665554322 34678887 3 4898887776 56899999 555555 44
Q ss_pred eeeec----------ccC-ceeEEEEcCCCC-EEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeE
Q 021036 236 GSYNA----------HDQ-VVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLG 303 (318)
Q Consensus 236 ~~~~~----------h~~-~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 303 (318)
..+.. |.. .+..+..++++. +++....+|.|.++|........+..-+.. ....+
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~-------------~~~~d 346 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE-------------RFLHD 346 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC-------------SSEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc-------------ccccC
Confidence 33321 222 577888888765 556667789999999876433222111111 14467
Q ss_pred EEEcCCCcEEEEE
Q 021036 304 MAVSPGNLVVAMV 316 (318)
Q Consensus 304 v~~sp~~~~l~~~ 316 (318)
+.|+|||++++++
T Consensus 347 ~~~~pdgr~~~va 359 (567)
T 1qks_A 347 GGLDGSHRYFITA 359 (567)
T ss_dssp EEECTTSCEEEEE
T ss_pred ceECCCCCEEEEE
Confidence 8999999988765
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=1.8e-08 Score=83.58 Aligned_cols=219 Identities=7% Similarity=-0.027 Sum_probs=125.0
Q ss_pred eeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEEcc
Q 021036 23 ASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRIC 102 (318)
Q Consensus 23 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~ 102 (318)
...++.+.+||..+++...........+.. .+..++++++. ++++++.. .+.|.+|+.+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~---~~~~i~~~~~~-----------------g~l~v~~~-~~~l~~~d~~ 100 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGG---IPAGCQCDRDA-----------------NQLFVADM-RLGLLVVQTD 100 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEEC---CEEEEEECSSS-----------------SEEEEEET-TTEEEEEETT
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCC---CCceEEEecCC-----------------CcEEEEEC-CCCEEEEeCC
Confidence 467888999988776542111100000111 12335555551 36565554 3468889987
Q ss_pred CCccccccccccCCceeEE-eee-c-cccccEEEEEeeeecCCCCCCCcEEEEEeCC---------------CcEEEEEC
Q 021036 103 VPKCYSVEDCKVPTTAVLI-GLF-Q-AHNSWITSISLAVLSSDSSNPQVLLVTGSSD---------------GSVRIWDG 164 (318)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~-~~~-~-~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d---------------~~v~iwd~ 164 (318)
++.. .+ ... . .....+.++.+ .++|+++++...+ +.|..+|.
T Consensus 101 -g~~~------------~~~~~~~~~~~~~~~~~i~~-------d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (314)
T 1pjx_A 101 -GTFE------------EIAKKDSEGRRMQGCNDCAF-------DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp -SCEE------------ECCSBCTTSCBCBCCCEEEE-------CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred -CCEE------------EEEeccCCCccccCCcCEEE-------CCCCCEEEEecCcccccccccccccCCCCeEEEECC
Confidence 5421 11 110 1 11245789999 8889888877655 56777765
Q ss_pred CCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEE-eCCCcEEEeeeccCCCeee---Eeeeeec
Q 021036 165 YIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG-KGSGSFDLWKCDISCNKFD---KVGSYNA 240 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~~~~---~~~~~~~ 240 (318)
. ++...... .......++++.... ++++.++.+ ..++.|.+|+.+. .++.. ....+..
T Consensus 161 ~-g~~~~~~~---------------~~~~~~~i~~~~~~d-~dg~~l~v~~~~~~~i~~~~~~~-~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 161 D-GQMIQVDT---------------AFQFPNGIAVRHMND-GRPYQLIVAETPTKKLWSYDIKG-PAKIENKKVWGHIPG 222 (314)
T ss_dssp T-SCEEEEEE---------------EESSEEEEEEEECTT-SCEEEEEEEETTTTEEEEEEEEE-TTEEEEEEEEEECCC
T ss_pred C-CCEEEecc---------------CCCCcceEEEecccC-CCCCEEEEEECCCCeEEEEECCC-CCccccceEEEECCC
Confidence 5 43322111 111345566641111 567555444 5678999996542 23221 2222333
Q ss_pred cc-CceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee-eeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 241 HD-QVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS-QVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 241 h~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+. ..+..++++++|.++++...++.|.+||..++... .+.... ..+.+++|+|+++.|..
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~---------------~~~~~i~~~~dg~~l~v 284 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF---------------EKPSNLHFKPQTKTIFV 284 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS---------------SCEEEEEECTTSSEEEE
T ss_pred CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC---------------CCceeEEECCCCCEEEE
Confidence 33 56788999999998888778889999998754433 222221 26789999999985443
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.18 E-value=6.5e-08 Score=79.43 Aligned_cols=182 Identities=10% Similarity=-0.036 Sum_probs=118.5
Q ss_pred ccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC
Q 021036 77 QNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD 156 (318)
Q Consensus 77 ~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d 156 (318)
++.++++++++++...++.|..+|.. ++. . ...+......+.++++ .++++++++...+
T Consensus 66 ~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~------------~-~~~~~~~~~~~~~i~~-------~~~g~l~v~~~~~ 124 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENGANKIGKLSKK-GGF------------T-EYPLPQPDSGPYGITE-------GLNGDIWFTQLNG 124 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCE------------E-EEECSSTTCCEEEEEE-------CSTTCEEEEETTT
T ss_pred eEEECCCCCEEEEecCCCeEEEECCC-CCe------------E-EecCCCCCCCCccceE-------CCCCCEEEEccCC
Confidence 34444445888877778889999987 431 1 1122223467899999 7888888887778
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
+.|..+|.. ++.... ... .....+..++++ ++++++++...++.|..| +. +++... .
T Consensus 125 ~~i~~~~~~-g~~~~~-~~~------------~~~~~~~~i~~d-----~~g~l~v~~~~~~~i~~~--~~-~g~~~~-~ 181 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEY-DLP------------NKGSYPAFITLG-----SDNALWFTENQNNSIGRI--TN-TGKLEE-Y 181 (300)
T ss_dssp TEEEEECTT-SCEEEE-ECS------------STTCCEEEEEEC-----TTSSEEEEETTTTEEEEE--CT-TCCEEE-E
T ss_pred CeEEEECCC-CCEEEc-cCC------------CCCCCceeEEEC-----CCCCEEEEecCCCeEEEE--CC-CCcEEE-e
Confidence 899999987 543321 111 012256788898 889877776667888888 44 344222 1
Q ss_pred eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 237 SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 237 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
....+...+..++++++|.++++....+.|.+||. ++......... +...+.+++++++|++.++.
T Consensus 182 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-------------~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 182 PLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPT-------------PNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSS-------------TTCCEEEEEECSTTCEEEEE
T ss_pred eCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCC-------------CCCCceEEEECCCCCEEEec
Confidence 22234456889999999987777777788999998 44444332221 12356889999988765553
No 203
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.18 E-value=2.5e-09 Score=90.98 Aligned_cols=97 Identities=11% Similarity=0.134 Sum_probs=67.9
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe----------CCCcEEE
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS----------SDGSVRI 161 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~----------~d~~v~i 161 (318)
.|+.|.+||..+++ .+..+..+..+ .+++ ++++++++++. .++.|.+
T Consensus 29 ~d~~v~v~D~~t~~--------------~~~~i~~g~~p--~i~~-------spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 29 TESRVHVYDYTNGK--------------FLGMVPTAFNG--HVQV-------SNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp GGCEEEEEETTTCC--------------EEEEEECCEEE--EEEE-------CTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred ccCeEEEEECCCCe--------------EEEEecCCCCC--ceEE-------CCCCCEEEEEEecccccccCCCCCEEEE
Confidence 47899999998754 44556555555 8999 99999999886 3678999
Q ss_pred EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC--CCcEEEee
Q 021036 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG--SGSFDLWK 224 (318)
Q Consensus 162 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~--dg~i~vw~ 224 (318)
||..+++....+...... ..+......++++ |+|++|++++. ++.|.+||
T Consensus 86 ~d~~t~~~~~~i~~~~~~--------~~~g~~p~~i~~s-----pdg~~l~v~n~~~~~~v~v~d 137 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKR--------VQGLNYDGLFRQT-----TDGKFIVLQNASPATSIGIVD 137 (361)
T ss_dssp EETTTCCEEEEEEECTTB--------CCBCCCGGGEEEC-----TTSSEEEEEEESSSEEEEEEE
T ss_pred EECcCCcEEEEEEcCccc--------cccCCCcceEEEC-----CCCCEEEEECCCCCCeEEEEE
Confidence 999988877766532110 0011234567787 88888888763 56788884
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=2.6e-08 Score=92.90 Aligned_cols=164 Identities=18% Similarity=0.097 Sum_probs=97.6
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC-----cEEEEECCCc--
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG-----SVRIWDGYIQ-- 167 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~-- 167 (318)
.|++|++.++... ...+.....+...+..+.| +++|++|+..+.++ .|++||+.++
T Consensus 244 ~v~~~~lgt~~~~----------~~lv~~~~~~~~~~~~~~~-------SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 244 TVWLHRLGTPQSA----------DQPVFATPELPKRGHGASV-------SSDGRWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp EEEEEETTSCGGG----------CEEEECCTTCTTCEEEEEE-------CTTSCEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred EEEEEECCCCchh----------CEEEeccCCCCeEEEEEEE-------CCCCCEEEEEEEccCCCcceEEEEECCCCCC
Confidence 3888998765421 1223233334446889999 99999888877544 8999998876
Q ss_pred ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC----CcEEEeeeccCC--CeeeEeeeeecc
Q 021036 168 ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS----GSFDLWKCDISC--NKFDKVGSYNAH 241 (318)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d----g~i~vw~~~~~~--~~~~~~~~~~~h 241 (318)
+....+..+. ..+... ++ |+|+.|+..+.+ +.|.+| +..+ ..++.+ +..+
T Consensus 307 ~~~~~l~~~~--------------~~~~~~-~~-----~dg~~l~~~s~~~~~~~~l~~~--d~~~~~~~~~~l--~~~~ 362 (741)
T 1yr2_A 307 GPVTALIPDL--------------KAQWDF-VD-----GVGDQLWFVSGDGAPLKKIVRV--DLSGSTPRFDTV--VPES 362 (741)
T ss_dssp CCCEEEECSS--------------SSCEEE-EE-----EETTEEEEEECTTCTTCEEEEE--ECSSSSCEEEEE--ECCC
T ss_pred cccEEecCCC--------------CceEEE-Ee-----ccCCEEEEEECCCCCCCEEEEE--eCCCCccccEEE--ecCC
Confidence 3123332221 122222 34 677777766643 347777 4444 232222 2344
Q ss_pred cCceeEEEEcCCCCEEEEecCCCcEEEEEec--CCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEE
Q 021036 242 DQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH--GNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVA 314 (318)
Q Consensus 242 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~ 314 (318)
...+..++|+ ++.++++...|+..+||.+. ++....+.... .+.+..++++|+++.|+
T Consensus 363 ~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~--------------~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 363 KDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG--------------IGSASGLSGRPGDRHAY 422 (741)
T ss_dssp SSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS--------------SCEEEEEECCBTCSCEE
T ss_pred CCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC--------------CeEEEEeecCCCCCEEE
Confidence 4556677777 55678888899988887665 33333332211 23678889999887555
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=1.7e-07 Score=79.96 Aligned_cols=233 Identities=9% Similarity=-0.100 Sum_probs=128.2
Q ss_pred CCCCCccceEEeeC--CC---ceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccE
Q 021036 12 MKDSNTHPTVAASK--SK---GNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSI 86 (318)
Q Consensus 12 ~~~~~~~~~~t~s~--d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~ 86 (318)
+.+.+.+.++.... .. ++.++|..+++.+..+.... . . .++++|++ ++
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~-~-------p-~i~~spDg------------------~~ 79 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF-L-------P-NPVAAHSG------------------SE 79 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC-C-------C-CeEECCCC------------------CE
Confidence 33444555555443 22 77889998877644433211 0 1 26666666 88
Q ss_pred EEEec----------CCCcEEEEEccCCccccccccccCCceeEEeeeccc-------cccEEEEEeeeecCCCCCCCcE
Q 021036 87 LAVGG----------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH-------NSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 87 l~~g~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
++++. .++.|.+||..+.+ .+..+... ...-..+.| +++|++
T Consensus 80 lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------------~~~~i~~~~~~~~~~g~~p~~~~~-------spDG~~ 138 (373)
T 2mad_H 80 FALASTSFSRIAKGKRTDYVEVFDPVTFL--------------PIADIELPDAPRFDVGPYSWMNAN-------TPNNAD 138 (373)
T ss_pred EEEEeccccccccCCCCCeEEEEECCCCc--------------EEEEEECCCccccccCCCccceEE-------CCCCCE
Confidence 87775 36789999998754 22222111 123357889 999999
Q ss_pred EEEEeC--CCcEEEEECCCcceeee-ecccccc----cc--------ccee--eeeecccce-----------------e
Q 021036 150 LVTGSS--DGSVRIWDGYIQELQKS-AEAHCVP----FS--------LLKE--VVTVNTVPI-----------------S 195 (318)
Q Consensus 150 l~s~~~--d~~v~iwd~~~~~~~~~-~~~~~~~----~~--------~~~~--~~~~~~~~v-----------------~ 195 (318)
|+++.. ++.|.++| .+++.... +...... .. .... .... ...+ .
T Consensus 139 l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~ 216 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred EEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceee
Confidence 998874 47899999 98887776 5432210 00 0000 0000 0000 0
Q ss_pred EEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec----------ccCceeEEEEcCCCCEEEEecC---
Q 021036 196 VLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA----------HDQVVTGLAWAFDGCCLYSCSQ--- 262 (318)
Q Consensus 196 ~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~l~s~~~--- 262 (318)
...+. +++..++..+..+.+.+. |........+..+.- .......+.++|+++.++.+..
T Consensus 217 ~~~~~-----~~~~~~~~~~~~~~v~vi--d~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~ 289 (373)
T 2mad_H 217 QPAQA-----NKSGRIVWPVYSGKILQA--DISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQS 289 (373)
T ss_pred cceeE-----ecCCEEEEEcCCceEEEE--eccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCC
Confidence 11122 333333333356667776 443332112222211 1122344788999887766543
Q ss_pred -------CCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc-EEEEE
Q 021036 263 -------DNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL-VVAMV 316 (318)
Q Consensus 263 -------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~~~ 316 (318)
.+.|.++|+.+++......... ...+++|+|||+ .++++
T Consensus 290 ~~~~~~~~~~V~VID~~t~~vv~~i~~g~---------------~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 290 AWKLHAAAKEVTSVTGLVGQTSSQISLGH---------------DVDAISVAQDGGPDLYAL 336 (373)
T ss_pred cccccCCCCeEEEEECCCCEEEEEEECCC---------------CcCeEEECCCCCeEEEEE
Confidence 3579999999877643322222 358999999998 66654
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.10 E-value=1.6e-07 Score=77.02 Aligned_cols=184 Identities=9% Similarity=-0.039 Sum_probs=120.3
Q ss_pred ccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 75 VPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
+.++.++++++++++...++.|..++.+ ++. . ...+......+.++.+ .++++++++..
T Consensus 106 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~------------~-~~~~~~~~~~~~~i~~-------d~~g~l~v~~~ 164 (300)
T 2qc5_A 106 PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI------------Y-EYDLPNKGSYPAFITL-------GSDNALWFTEN 164 (300)
T ss_dssp EEEEEECSTTCEEEEETTTTEEEEECTT-SCE------------E-EEECSSTTCCEEEEEE-------CTTSSEEEEET
T ss_pred CccceECCCCCEEEEccCCCeEEEECCC-CCE------------E-EccCCCCCCCceeEEE-------CCCCCEEEEec
Confidence 4455555556888887778889999887 431 1 1112333457889999 78888777776
Q ss_pred CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeE
Q 021036 155 SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDK 234 (318)
Q Consensus 155 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 234 (318)
.++.|..+|. +++... +... .....+..++++ +++.++++....+.|.+| +. +++...
T Consensus 165 ~~~~i~~~~~-~g~~~~-~~~~------------~~~~~~~~i~~d-----~~g~l~v~~~~~~~i~~~--~~-~g~~~~ 222 (300)
T 2qc5_A 165 QNNSIGRITN-TGKLEE-YPLP------------TNAAAPVGITSG-----NDGALWFVEIMGNKIGRI--TT-TGEISE 222 (300)
T ss_dssp TTTEEEEECT-TCCEEE-EECS------------STTCCEEEEEEC-----TTSSEEEEETTTTEEEEE--CT-TCCEEE
T ss_pred CCCeEEEECC-CCcEEE-eeCC------------CCCCCcceEEEC-----CCCCEEEEccCCCEEEEE--cC-CCcEEE
Confidence 6789999998 444332 2110 112356788898 888877777777789998 44 333222
Q ss_pred eeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEE
Q 021036 235 VGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVA 314 (318)
Q Consensus 235 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~ 314 (318)
. .+..+...+.+++++++|+++++...++.|..||. ++....+..... ...+.+++++++|.+.+
T Consensus 223 ~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-------------~~~~~~i~~~~~g~l~v 287 (300)
T 2qc5_A 223 Y-DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTE-------------NAEPHGITFGKDGSVWF 287 (300)
T ss_dssp E-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCST-------------TCCCCCEEECTTSCEEE
T ss_pred E-ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCcc-------------CCccceeEeCCCCCEEE
Confidence 1 22234566889999999997777767789999998 444443322211 12568899999988765
Q ss_pred EE
Q 021036 315 MV 316 (318)
Q Consensus 315 ~~ 316 (318)
+.
T Consensus 288 ~~ 289 (300)
T 2qc5_A 288 AL 289 (300)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 207
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=9.4e-09 Score=86.78 Aligned_cols=207 Identities=6% Similarity=-0.017 Sum_probs=126.6
Q ss_pred CCcccccccCCCCCccEEEEecC-----CCcEEEEEccCCccccccccccCCceeEEeeec------cccccEEEEEeee
Q 021036 70 SKKYPVPQNGSSNWFSILAVGGR-----SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ------AHNSWITSISLAV 138 (318)
Q Consensus 70 ~~~~~v~~~~~s~~~~~l~~g~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p 138 (318)
.|...+.+++++++++++++-.. ++.|.+||..+++ .++.+. .+...+..+++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~--------------~~~~~~~~~~~~~~~~~~~~v~v-- 127 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ--------------LSRVIYLPPPITLSNSFVNDLAV-- 127 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE--------------EEEEEECCTTTSCTTCCCCEEEE--
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe--------------EEEEEECChhhcccccccceEEE--
Confidence 34556677777777787776543 5789999998764 222222 12345688999
Q ss_pred ecCCCCC-CCcEEEEEe---CCCcEEEEECCCcceeeeeccccc------ccccceeeee---e------cccceeEEEE
Q 021036 139 LSSDSSN-PQVLLVTGS---SDGSVRIWDGYIQELQKSAEAHCV------PFSLLKEVVT---V------NTVPISVLSL 199 (318)
Q Consensus 139 ~~~~~~~-~~~~l~s~~---~d~~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~---~------~~~~v~~l~~ 199 (318)
.+ ++..+++.. .++.|.+||+.+++....+..+.. .+........ . -...+..|++
T Consensus 128 -----d~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~ 202 (343)
T 2qe8_A 128 -----DLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVL 202 (343)
T ss_dssp -----ETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEE
T ss_pred -----ecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEe
Confidence 55 455556655 678999999988876655543211 0000000000 0 0124678999
Q ss_pred eeccCCCCceEEEEEeCCCcEEEeeeccC---CCee---eEee--eeecccCceeEEEEcCCCCEEEEecCCCcEEEEEe
Q 021036 200 ILPVQSPRLMLLAVGKGSGSFDLWKCDIS---CNKF---DKVG--SYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIF 271 (318)
Q Consensus 200 ~~~~~~~~~~~l~~~~~dg~i~vw~~~~~---~~~~---~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 271 (318)
+ |+++.|+.+..++. ++|.++.. .... +... ...++......++++++|.++++...++.|.+||.
T Consensus 203 s-----~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 203 D-----AENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp C-----TTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred c-----cCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 9 99998888876664 55544421 1100 0000 11234445678999999999999999999999998
Q ss_pred cCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 272 HGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.+++...+...+ +...+.+++|.++++++++.
T Consensus 277 ~~G~~~~~~~~~-------------~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 277 ADRAYKLLVTDE-------------KLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TTTEEEEEEECG-------------GGSCEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECC-------------ceecCCeeEECCCCcEEEEe
Confidence 555544333222 12357899999998876664
No 208
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=3.6e-08 Score=84.36 Aligned_cols=241 Identities=14% Similarity=0.043 Sum_probs=137.4
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceec----chhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecC
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITA----DQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGR 92 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~ 92 (318)
....+++..+..|.++|+.+....+.+.. .....+.. .++ |. .+.++++| +++++..
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g------~s~-Ph-----------~~~~~pdG-i~Vs~~g 156 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG------YSR-LH-----------TVHCGPDA-IYISALG 156 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC------EEE-EE-----------EEEECSSC-EEEEEEE
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccC------CCc-cc-----------ceeECCCe-EEEEcCC
Confidence 44567788899999999976533232221 11100000 111 11 12333445 5555444
Q ss_pred C------CcEEEEEccCCccccccccccCCceeEEeeecc--cc-ccEEEEEeeeecCCCCCCCcEEEEEe---------
Q 021036 93 S------GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA--HN-SWITSISLAVLSSDSSNPQVLLVTGS--------- 154 (318)
Q Consensus 93 d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~-~~v~~~~~~p~~~~~~~~~~~l~s~~--------- 154 (318)
+ |.|.+.|.++.+ .+..+.. .. ..-+.+.| +++++.++++.
T Consensus 157 ~~~g~~~g~v~vlD~~T~~--------------v~~~~~~~~~~~~~~Yd~~~-------~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 157 NEEGEGPGGILMLDHYSFE--------------PLGKWEIDRGDQYLAYDFWW-------NLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp ETTSCSCCEEEEECTTTCC--------------EEEECCSBCTTCCCCCCEEE-------ETTTTEEEECBCCCHHHHTT
T ss_pred CcCCCCCCeEEEEECCCCe--------------EEEEEccCCCCccccceEEE-------CCCCCEEEEccCcCcccccc
Confidence 4 789999999854 4444432 11 22346788 78888888884
Q ss_pred ----------CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEE--eeccCCCCceEEEEEe------C
Q 021036 155 ----------SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSL--ILPVQSPRLMLLAVGK------G 216 (318)
Q Consensus 155 ----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~~~~~~l~~~~------~ 216 (318)
.+.+|.+||+.+++...++..... ......+.| + |+++++++++ .
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~------------g~~P~~i~f~~~-----Pdg~~aYV~~e~~~~~L 278 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE------------NRMALELRPLHD-----PTKLMGFINMVVSLKDL 278 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT------------EEEEEEEEECSS-----TTCCEEEEEEEEETTTC
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCC------------CCccceeEeeEC-----CCCCEEEEEEeeeccCC
Confidence 468999999998877776654310 112345555 6 8998888777 4
Q ss_pred CCcEEEeeeccCCCeeeEeeee--ecc----------------cCceeEEEEcCCCCEEEEec-CCCcEEEEEecCC-ce
Q 021036 217 SGSFDLWKCDISCNKFDKVGSY--NAH----------------DQVVTGLAWAFDGCCLYSCS-QDNFVRSWIFHGN-SL 276 (318)
Q Consensus 217 dg~i~vw~~~~~~~~~~~~~~~--~~h----------------~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~-~~ 276 (318)
+++|.+|..+. ++++....+ ... ......+.++|||++|.++. ..+.|.+||+... ..
T Consensus 279 ss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~ 356 (462)
T 2ece_A 279 SSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP 356 (462)
T ss_dssp CEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC
T ss_pred CceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 66888876553 554443332 110 23468899999999876654 4689999998632 21
Q ss_pred --e-eeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 277 --S-QVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 277 --~-~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
. .+..........-. ....-.+.-..++++|||++|.++.
T Consensus 357 ~lv~~I~tGG~~~~~~~~-~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 357 VLTGKVKLGGIFHRADHP-AGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEEEECBTTTTCBCCT-TSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEEEeCCeecccccc-ccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1 12111000000000 0000011247899999999988764
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.07 E-value=1.9e-08 Score=86.63 Aligned_cols=239 Identities=10% Similarity=-0.061 Sum_probs=140.6
Q ss_pred cCcCCCCCccceEEeeC-C----CceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCC
Q 021036 9 SNKMKDSNTHPTVAASK-S----KGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNW 83 (318)
Q Consensus 9 ~~~~~~~~~~~~~t~s~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~ 83 (318)
-.++.+.+.+.++.... + +.|.+.|..+++.+..+.....+ .++++|++
T Consensus 76 ~~~~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P---------gia~SpDg----------------- 129 (426)
T 3c75_H 76 ILEAPAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP---------HPVAAEDG----------------- 129 (426)
T ss_dssp BCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC---------EEEECTTS-----------------
T ss_pred ccccCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC---------ceEECCCC-----------------
Confidence 34566666666655544 3 68999999999887776643211 27777777
Q ss_pred ccEEEEec----------CCCcEEEEEccCCccccccccccCCceeEEeeeccc-------cccEEEEEeeeecCCCCCC
Q 021036 84 FSILAVGG----------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH-------NSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 84 ~~~l~~g~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~~~~~ 146 (318)
++|+++. .++.|.++|..+.+ .+..+.-- ...-..+.+ +++
T Consensus 130 -k~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------------vv~~I~v~g~~r~~~g~~P~~~~~-------spD 187 (426)
T 3c75_H 130 -SFFAQASTVFERIARGKRTDYVEVFDPVTFL--------------PIADIELPDAPRFLVGTYQWMNAL-------TPD 187 (426)
T ss_dssp -SCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------------EEEEEEETTCCCCCBSCCGGGSEE-------CTT
T ss_pred -CEEEEEeccccccccCCCCCEEEEEECCCCc--------------EEEEEECCCccccccCCCcceEEE-------cCC
Confidence 7766664 46789999999855 33333210 122356788 899
Q ss_pred CcEEEEEeC--CCcEEEEECCCcceeeeeccccc----ccc--------ccee--eeeeccccee---------------
Q 021036 147 QVLLVTGSS--DGSVRIWDGYIQELQKSAEAHCV----PFS--------LLKE--VVTVNTVPIS--------------- 195 (318)
Q Consensus 147 ~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~----~~~--------~~~~--~~~~~~~~v~--------------- 195 (318)
|++|+++.. ++.|.+.|+.+++.+..+..... +.. .... +.......+.
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~ 267 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLI 267 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBC
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCcee
Confidence 999998874 57899999999988877654221 000 0000 0000001111
Q ss_pred -EEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec----------ccCceeEEEEcCCCCEEEEecC--
Q 021036 196 -VLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA----------HDQVVTGLAWAFDGCCLYSCSQ-- 262 (318)
Q Consensus 196 -~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~l~s~~~-- 262 (318)
.+.+. +++..++..+..+.+.+.| ........+..+.- .......++++|+++.++....
T Consensus 268 ~~~~~~-----~dg~~~~~~s~~g~V~ViD--~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~ 340 (426)
T 3c75_H 268 NHPAFS-----LRSGRLVWPTYTGKIFQAD--LTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR 340 (426)
T ss_dssp SCCEEC-----TTTCEEEEEBTTSEEEEEE--ECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC
T ss_pred eEeeec-----CCCCEEEEEeCCCcEEEEe--ccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccc
Confidence 11223 5555555556677777774 33332112111110 1112234789999886665532
Q ss_pred --------CCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc-EEEEEe
Q 021036 263 --------DNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL-VVAMVQ 317 (318)
Q Consensus 263 --------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~~~~ 317 (318)
++.|.++|+.+.+......-+ ....+++|+|||+ .+++..
T Consensus 341 ~~gthk~~s~~VsVID~~T~kvv~~I~vg---------------~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 341 DEWKHKAASRFVVVLNAETGERINKIELG---------------HEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEEE---------------EEECEEEECCSSSCEEEEEE
T ss_pred ccccccCCCCEEEEEECCCCeEEEEEECC---------------CCcCeEEEccCCCEEEEEEc
Confidence 357999999987765432211 1468999999998 777654
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.06 E-value=1.2e-07 Score=78.14 Aligned_cols=187 Identities=16% Similarity=0.099 Sum_probs=114.2
Q ss_pred eeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeee
Q 021036 59 AVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAV 138 (318)
Q Consensus 59 ~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 138 (318)
...|+|.. +.++++...++.|..|+..+++. ..+ .....+.++.+
T Consensus 17 gp~w~~~~-----------------~~l~~~d~~~~~i~~~d~~~~~~---------------~~~-~~~~~~~~i~~-- 61 (297)
T 3g4e_A 17 SPVWEEVS-----------------NSLLFVDIPAKKVCRWDSFTKQV---------------QRV-TMDAPVSSVAL-- 61 (297)
T ss_dssp EEEEETTT-----------------TEEEEEETTTTEEEEEETTTCCE---------------EEE-ECSSCEEEEEE--
T ss_pred CCeEECCC-----------------CEEEEEECCCCEEEEEECCCCcE---------------EEE-eCCCceEEEEE--
Confidence 47888865 47788888899999999987541 122 23467899999
Q ss_pred ecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC-
Q 021036 139 LSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS- 217 (318)
Q Consensus 139 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d- 217 (318)
.++|+++++ . +..|.+||..+++.......... .....++.++++ |+|+++++....
T Consensus 62 -----~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~----------~~~~~~~di~~d-----~dG~l~~~~~~~~ 119 (297)
T 3g4e_A 62 -----RQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDND----------KKNNRFNDGKVD-----PAGRYFAGTMAEE 119 (297)
T ss_dssp -----BTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTT----------CSSEEEEEEEEC-----TTSCEEEEEEECC
T ss_pred -----CCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCC----------CCCCCCCCEEEC-----CCCCEEEecCCcc
Confidence 888885554 3 56899999987654332211110 012246789998 899976655322
Q ss_pred --------CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEE-EEecCCCcEEEEEec--CCceeeeecCCCCC
Q 021036 218 --------GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCL-YSCSQDNFVRSWIFH--GNSLSQVSIPTNTP 286 (318)
Q Consensus 218 --------g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~ 286 (318)
....+|.++... +... +..+......++|+|+++.| ++.+.++.|.+|++. ++.+......
T Consensus 120 ~~~~~~~~~~~~l~~~d~~g-~~~~---~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~---- 191 (297)
T 3g4e_A 120 TAPAVLERHQGALYSLFPDH-HVKK---YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSV---- 191 (297)
T ss_dssp SBTTBCCTTCEEEEEECTTS-CEEE---EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEE----
T ss_pred cccccccCCCcEEEEEECCC-CEEE---EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEE----
Confidence 334666556543 2212 22333456789999999865 555667899999983 4433210000
Q ss_pred CccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 287 GLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 287 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.++..+.....+++++++|.+.++
T Consensus 192 -----~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 192 -----YKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp -----EECCGGGCEEEEEEEBTTSCEEEE
T ss_pred -----EECCCCCCCCCeeEECCCCCEEEE
Confidence 001111235567778877765554
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.03 E-value=4.3e-08 Score=90.68 Aligned_cols=189 Identities=11% Similarity=0.031 Sum_probs=110.2
Q ss_pred eCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCC---------
Q 021036 24 SKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSG--------- 94 (318)
Q Consensus 24 s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg--------- 94 (318)
+...+|++||+.+++.+.. .... .. ...++|+ ++ +.|+.++.+.
T Consensus 152 ~~~~~i~v~dl~tg~~~~~-~~~~----~k---~~~~~Ws-Dg------------------~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 152 SDWREIHLMDVESKQPLET-PLKD----VK---FSGISWL-GN------------------EGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp CCEEEEEEEETTTCSEEEE-EEEE----EE---SCCCEEE-TT------------------TEEEEEESSCCC-------
T ss_pred CceEEEEEEECCCCCCCcc-ccCC----ce---eccEEEe-CC------------------CEEEEEEecCccccccccc
Confidence 3346789999999875432 1100 00 1237888 77 7777776663
Q ss_pred ----cEEEEEccCCccccccccccCCceeEEeeecc-ccccEEEEEeeeecCCCCCCCcEEEEEeC----CCcEEEEECC
Q 021036 95 ----KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA-HNSWITSISLAVLSSDSSNPQVLLVTGSS----DGSVRIWDGY 165 (318)
Q Consensus 95 ----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~l~s~~~----d~~v~iwd~~ 165 (318)
.|++|++.++... ...+..... |...+..+.| +++|++|+.... +..|+++|+.
T Consensus 205 ~~~~~v~~~~lgt~~~~----------~~~v~~~~~~~~~~~~~~~~-------SpDg~~l~~~~~~~~~~~~i~~~d~~ 267 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQED----------DRLVFGAIPAQHHRYVGATV-------TEDDRFLLISAANSTSGNRLYVKDLS 267 (693)
T ss_dssp CCCCEEEEEETTSCGGG----------CEEEESCSGGGCCSEEEEEE-------CTTSCEEEEEEESSSSCCEEEEEETT
T ss_pred CCCcEEEEEECCCCccc----------ceEEEecCCCCCeEEEEEEE-------cCCCCEEEEEEccCCCCcEEEEEECC
Confidence 3999998875421 123333344 5556788999 899988765432 3589999998
Q ss_pred Ccc-eeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCC---CcEEEeeeccCCCeeeEeeeeec
Q 021036 166 IQE-LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGS---GSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
++. ....+..+. ...... ++ ++ +.+++.+..+ +.|..+ +..+........+..
T Consensus 268 ~~~~~~~~l~~~~--------------~~~~~~-~~-----~~g~~l~~~t~~~~~~~~l~~~--d~~~~~~~~~~~l~~ 325 (693)
T 3iuj_A 268 QENAPLLTVQGDL--------------DADVSL-VD-----NKGSTLYLLTNRDAPNRRLVTV--DAANPGPAHWRDLIP 325 (693)
T ss_dssp STTCCCEEEECSS--------------SSCEEE-EE-----EETTEEEEEECTTCTTCEEEEE--ETTSCCGGGCEEEEC
T ss_pred CCCCceEEEeCCC--------------CceEEE-Ee-----ccCCEEEEEECCCCCCCEEEEE--eCCCCCccccEEEec
Confidence 763 223332221 122222 44 44 4455555543 456666 555543212234555
Q ss_pred ccCceeEEEEcCCCCEEEEecC-CC--cEEEEEecCCceeeee
Q 021036 241 HDQVVTGLAWAFDGCCLYSCSQ-DN--FVRSWIFHGNSLSQVS 280 (318)
Q Consensus 241 h~~~v~~~~~~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~ 280 (318)
|...+. .|+++++.|+.... ++ .|++||+.++....+.
T Consensus 326 ~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 326 ERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp CCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred CCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence 665554 89999887776654 43 6889988766555443
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.03 E-value=1e-07 Score=78.92 Aligned_cols=176 Identities=12% Similarity=0.070 Sum_probs=104.5
Q ss_pred CCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccc-cccEEEEEeeeecCCCCCCCcEEEE----Ee
Q 021036 80 SSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH-NSWITSISLAVLSSDSSNPQVLLVT----GS 154 (318)
Q Consensus 80 ~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~l~s----~~ 154 (318)
++++|+++++...++.|.+|+.+ ++.. .......+. ...++.+.+ .++|+++++ |.
T Consensus 93 ~d~dG~l~v~~~~~~~v~~~~~~-g~~~-----------~~~~~~~~~~~~~~~~i~~-------d~dG~l~~td~~~g~ 153 (305)
T 3dr2_A 93 VDAQQRLVHCEHGRRAITRSDAD-GQAH-----------LLVGRYAGKRLNSPNDLIV-------ARDGAIWFTDPPFGL 153 (305)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEE-----------EEECEETTEECSCCCCEEE-------CTTSCEEEECCSGGG
T ss_pred ECCCCCEEEEECCCCEEEEECCC-CCEE-----------EEEeccCCCccCCCCCEEE-------CCCCCEEEeCcCCCc
Confidence 33334877776667889999876 4311 111111111 234678999 889988886 33
Q ss_pred C-------------CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC----
Q 021036 155 S-------------DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS---- 217 (318)
Q Consensus 155 ~-------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d---- 217 (318)
. .+.|..+|..+++..... . ....+.++|+ |+++.|+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~--------------~~~p~gl~~s-----pdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 154 RKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D--------------LDHPNGLAFS-----PDEQTLYVSQTPEQGH 212 (305)
T ss_dssp SCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E--------------ESSEEEEEEC-----TTSSEEEEEECCC---
T ss_pred cccccccccccccCCCeEEEEcCCCCcEEEEe--c--------------CCCCcceEEc-----CCCCEEEEEecCCcCC
Confidence 2 245777776555533221 1 1145678999 999987777655
Q ss_pred --CcEEEeeeccCCCeeeEeeee-ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccC
Q 021036 218 --GSFDLWKCDISCNKFDKVGSY-NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDL 294 (318)
Q Consensus 218 --g~i~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 294 (318)
+.|.+|+++. ........+ .........++++++|++.+ +..+ .|.+|+..+.....+....
T Consensus 213 ~~~~i~~~~~~~--~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~~g~~~~~~~~~~----------- 277 (305)
T 3dr2_A 213 GSVEITAFAWRD--GALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDSDGQLLGHIPTPG----------- 277 (305)
T ss_dssp CCCEEEEEEEET--TEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECTTSCEEEEEECSS-----------
T ss_pred CCCEEEEEEecC--CCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECCCCCEEEEEECCC-----------
Confidence 6888886542 211111111 11234456789999998544 4444 4999998655444443222
Q ss_pred CCcceeeeEEEEcCCCcEEEE
Q 021036 295 PDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 295 ~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.+.+++|+|+++.|..
T Consensus 278 -----~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 278 -----TASNCTFDQAQQRLFI 293 (305)
T ss_dssp -----CCCEEEECTTSCEEEE
T ss_pred -----ceeEEEEeCCCCEEEE
Confidence 3578999998875554
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.03 E-value=1.3e-10 Score=99.17 Aligned_cols=185 Identities=10% Similarity=-0.015 Sum_probs=95.7
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
....+++++.|+.+..||..+++.+-.+.. +. +.+..+..++.++++++.||.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~------~~---------------------~~s~p~~~~g~~~v~~s~dg~ 60 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE------DP---------------------VLQVPTHVEEPAFLPDPNDGS 60 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC------CC---------------------SCCCC-----CCEEECTTTCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC------CC---------------------ceecceEcCCCEEEEeCCCCE
Confidence 346688999999999999999986544332 11 111111223468888899999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccc-cEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS-WITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
|+.||.++++.. ..+..+.. .+. -.|. ...+..+++++.|+.|+.||..+|+....+.
T Consensus 61 l~a~d~~tG~~~--------------w~~~~~~~~~~~---~sp~----~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 61 LYTLGSKNNEGL--------------TKLPFTIPELVQ---ASPC----RSSDGILYMGKKQDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp EEEC-----CCS--------------EECSCCHHHHHT---TCSC----C-----CCCCEEEEEEEEECCC---------
T ss_pred EEEEECCCCcee--------------eeeeccCccccc---cCce----EecCCEEEEEeCCCEEEEEECCCCcEEEEec
Confidence 999999886532 22222111 110 0010 1134567888899999999999998877655
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCC
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG 254 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 254 (318)
.+. ...++ |++..+++++.++.|+.| |.++++ .+.++..+. .....++++.
T Consensus 120 ~~~------------------~~~~~-----p~~~~v~~~~~dg~v~a~--d~~tG~--~~W~~~~~~--~~~~~~~~~~ 170 (369)
T 2hz6_A 120 SAF------------------ADSLS-----PSTSLLYLGRTEYTITMY--DTKTRE--LRWNATYFD--YAASLPEDDV 170 (369)
T ss_dssp ------------------------------------EEEEEEEEEEECC--CSSSSS--CCCEEEEEE--ECCBCCCCCT
T ss_pred CCC------------------ccccc-----ccCCEEEEEecCCEEEEE--ECCCCC--EEEeEeccc--ccCccccCCc
Confidence 322 12344 678889999999999999 666665 233332111 1223334432
Q ss_pred ---CEEEEecCCCcEEEEEecCCcee
Q 021036 255 ---CCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 255 ---~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
..+++++.||.|+.||..+++..
T Consensus 171 ~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 171 DYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp TCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred cccceEEEECCCCEEEEEECCCCcEE
Confidence 45777888999999999887653
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.99 E-value=9.8e-08 Score=82.47 Aligned_cols=202 Identities=10% Similarity=-0.023 Sum_probs=119.1
Q ss_pred cccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE
Q 021036 72 KYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV 151 (318)
Q Consensus 72 ~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~ 151 (318)
......++++++++++++...++.|++||.+++.. ...... ..... ++| +++++.|+
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~--------------~~~~~~-~~~~~-ia~-------~~~g~~l~ 186 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV--------------TTVHPG-FKGGK-PAV-------TKDKQRVY 186 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE--------------EEEEET-CCBCB-CEE-------CTTSSEEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE--------------EEeecc-CCCCc-eeE-------ecCCCcEE
Confidence 34566777888889888888889999999987542 222222 22233 899 88999888
Q ss_pred EEeCCC--cEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC
Q 021036 152 TGSSDG--SVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 152 s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 229 (318)
++..++ .|.+++...+.....+.... ......+.+++++ |++..|+.+..++.|+.| +..+
T Consensus 187 ~~d~~~~~~I~~~d~~~~~~~~~~g~~~----------~~~~~~p~~iav~-----p~~g~lyv~d~~~~I~~~--d~~~ 249 (409)
T 3hrp_A 187 SIGWEGTHTVYVYMKASGWAPTRIGQLG----------STFSGKIGAVALD-----ETEEWLYFVDSNKNFGRF--NVKT 249 (409)
T ss_dssp EEBSSTTCEEEEEEGGGTTCEEEEEECC----------TTSCSCCCBCEEC-----TTSSEEEEECTTCEEEEE--ETTT
T ss_pred EEecCCCceEEEEEcCCCceeEEeeecc----------chhcCCcEEEEEe-----CCCCeEEEEECCCcEEEE--ECCC
Confidence 888766 78888877654433220000 0012356788898 744444447778888888 4444
Q ss_pred CeeeEeee--eecccCce-e-EEEEcCC-CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCcc-ccccCCCcceeeeE
Q 021036 230 NKFDKVGS--YNAHDQVV-T-GLAWAFD-GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQ-SCTDLPDAFVSCLG 303 (318)
Q Consensus 230 ~~~~~~~~--~~~h~~~v-~-~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~ 303 (318)
.....+.. ..++...- . .++|+|+ +.++++-..++.|+.|+.... ...+.......... + ...........+
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg-~~~~~~~~~P~g 327 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDG-LREEALFAQPNG 327 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCE-EGGGCBCSSEEE
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCC-cccccEeCCCeE
Confidence 43222211 11222222 3 8999995 666677777889999987654 33333222110000 0 000011235689
Q ss_pred EEEcCCCcEEEE
Q 021036 304 MAVSPGNLVVAM 315 (318)
Q Consensus 304 v~~sp~~~~l~~ 315 (318)
++++|+|.++++
T Consensus 328 ia~d~dG~lyva 339 (409)
T 3hrp_A 328 MTVDEDGNFYIV 339 (409)
T ss_dssp EEECTTCCEEEE
T ss_pred EEEeCCCCEEEE
Confidence 999999986554
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.99 E-value=1.4e-07 Score=78.16 Aligned_cols=156 Identities=7% Similarity=0.014 Sum_probs=98.0
Q ss_pred ccccCCCCCccEEEEecCC---------------CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeee
Q 021036 75 VPQNGSSNWFSILAVGGRS---------------GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVL 139 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~d---------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 139 (318)
+.++.++++|+++++...+ +.|..|+.. ++ . ..+..+......++|
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--------------~-~~~~~~~~~~~~i~~--- 179 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--------------M-IQVDTAFQFPNGIAV--- 179 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--------------E-EEEEEEESSEEEEEE---
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC--------------E-EEeccCCCCcceEEE---
Confidence 3445555555887776554 456666554 32 1 112223345678889
Q ss_pred cCCCC----CCCcEEEEE-eCCCcEEEEECC-Ccceee--eecccccccccceeeeeecc-cceeEEEEeeccCCCCceE
Q 021036 140 SSDSS----NPQVLLVTG-SSDGSVRIWDGY-IQELQK--SAEAHCVPFSLLKEVVTVNT-VPISVLSLILPVQSPRLML 210 (318)
Q Consensus 140 ~~~~~----~~~~~l~s~-~~d~~v~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~~~ 210 (318)
+ ++++.|+.+ ..++.|.+||.. .++... .+.. ...+. ..+..++++ ++|.+
T Consensus 180 ----~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~p~~i~~d-----~~G~l 239 (314)
T 1pjx_A 180 ----RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH-----------IPGTHEGGADGMDFD-----EDNNL 239 (314)
T ss_dssp ----EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE-----------CCCCSSCEEEEEEEB-----TTCCE
T ss_pred ----ecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE-----------CCCCCCCCCCceEEC-----CCCCE
Confidence 7 888655444 567899999976 333211 1100 00111 246778898 89998
Q ss_pred EEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC-EEEEecCCCcEEEEEecC
Q 021036 211 LAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHG 273 (318)
Q Consensus 211 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~ 273 (318)
+++...++.|.+| +..+++ .+..+..+...+.+++|+|+|+ ++++...++.|..|++..
T Consensus 240 ~v~~~~~~~i~~~--d~~~g~--~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 240 LVANWGSSHIEVF--GPDGGQ--PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEETTTEEEEE--CTTCBS--CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCEEEEE--cCCCCc--EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 8888788899999 555343 3334445557789999999999 445556678999999865
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.98 E-value=8.8e-08 Score=89.32 Aligned_cols=151 Identities=10% Similarity=-0.073 Sum_probs=91.5
Q ss_pred CCCccEEEEecCC-----CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC
Q 021036 81 SNWFSILAVGGRS-----GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS 155 (318)
Q Consensus 81 s~~~~~l~~g~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~ 155 (318)
||+|++||.+..+ ..|++||+++++.. .. ..+...+..++| +++ +.|+.++.
T Consensus 171 SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~--------------~~-~~~~~~~~~~~w-------spD-~~l~~~~~ 227 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL--------------AD-ELKWVKFSGLAW-------LGN-DALLYSRF 227 (741)
T ss_dssp CTTSSEEEEEEEETTCSEEEEEEEETTTCCEE--------------EE-EEEEEESCCCEE-------STT-SEEEEEEC
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCC--------------Cc-cCCCceeccEEE-------ECC-CEEEEEEe
Confidence 3333888776543 35999999987632 11 111222357899 888 88888877
Q ss_pred CCc--------------EEEEECCCccee--eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC-
Q 021036 156 DGS--------------VRIWDGYIQELQ--KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG- 218 (318)
Q Consensus 156 d~~--------------v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg- 218 (318)
|+. |++|++.++... ..+.... +...+..+.|+ |+|++|+..+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~------------~~~~~~~~~~S-----pDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 228 AEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE------------LPKRGHGASVS-----SDGRWVVITSSEGT 290 (741)
T ss_dssp CCC--------CCCCCEEEEEETTSCGGGCEEEECCTT------------CTTCEEEEEEC-----TTSCEEEEEEECTT
T ss_pred cCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC------------CCeEEEEEEEC-----CCCCEEEEEEEccC
Confidence 654 889998766422 1111111 11236788888 9999888777543
Q ss_pred ----cEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecC----CCcEEEEEecCC
Q 021036 219 ----SFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ----DNFVRSWIFHGN 274 (318)
Q Consensus 219 ----~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~ 274 (318)
.|++|++ .++.......+..+...+... ++|+|..|+..+. ++.|.+||+.++
T Consensus 291 ~~~~~l~~~d~--~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 291 DPVNTVHVARV--TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CSCCEEEEEEE--ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred CCcceEEEEEC--CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 6888854 343111023344444444444 3488887777665 345999998774
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.96 E-value=1.8e-07 Score=77.44 Aligned_cols=156 Identities=10% Similarity=0.103 Sum_probs=102.1
Q ss_pred eeeecccccCCCCcccccccCCCCCcc-EEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEee
Q 021036 59 AVAWSPVLRLSSKKYPVPQNGSSNWFS-ILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLA 137 (318)
Q Consensus 59 ~~~w~p~~~~~~~~~~v~~~~~s~~~~-~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 137 (318)
...|+|++ + +++++..++.|..|+.. ++ ...+..+...+..+.+
T Consensus 49 gp~~~~~g------------------~~l~~~d~~~~~i~~~~~~-g~---------------~~~~~~~~~~~~gl~~- 93 (305)
T 3dr2_A 49 GPAWWEAQ------------------RTLVWSDLVGRRVLGWRED-GT---------------VDVLLDATAFTNGNAV- 93 (305)
T ss_dssp EEEEEGGG------------------TEEEEEETTTTEEEEEETT-SC---------------EEEEEESCSCEEEEEE-
T ss_pred CCeEeCCC------------------CEEEEEECCCCEEEEEeCC-CC---------------EEEEeCCCCccceeeE-
Confidence 37788887 6 77888889999999874 32 1234445667899999
Q ss_pred eecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEE----
Q 021036 138 VLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAV---- 213 (318)
Q Consensus 138 p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~---- 213 (318)
.++|+++++...++.|.+|+.. ++......... ......++.++++ ++|.++++
T Consensus 94 ------d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~----------~~~~~~~~~i~~d-----~dG~l~~td~~~ 151 (305)
T 3dr2_A 94 ------DAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA----------GKRLNSPNDLIVA-----RDGAIWFTDPPF 151 (305)
T ss_dssp ------CTTSCEEEEETTTTEEEEECTT-SCEEEEECEET----------TEECSCCCCEEEC-----TTSCEEEECCSG
T ss_pred ------CCCCCEEEEECCCCEEEEECCC-CCEEEEEeccC----------CCccCCCCCEEEC-----CCCCEEEeCcCC
Confidence 8899877766666889999986 44322111100 0011246778998 89998886
Q ss_pred EeCC-----------CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC------CcEEEEEecCCc
Q 021036 214 GKGS-----------GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD------NFVRSWIFHGNS 275 (318)
Q Consensus 214 ~~~d-----------g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~ 275 (318)
|..+ +.-.||.++..+++...+. .......++|+|+++.|+.+... +.|.+|++..+.
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CccccccccccccccCCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 3321 1234444476566543332 33456789999999977766554 789999987643
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.93 E-value=9.8e-07 Score=73.76 Aligned_cols=144 Identities=11% Similarity=0.009 Sum_probs=92.4
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD 163 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd 163 (318)
+.++++...++.|..|+.++++. ..+. ....+.++.| .++|+++++. . ..|.+||
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~---------------~~~~-~~~~v~~i~~-------~~dg~l~v~~-~-~gl~~~d 115 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRK---------------TVHA-LPFMGSALAK-------ISDSKQLIAS-D-DGLFLRD 115 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEE---------------EEEE-CSSCEEEEEE-------EETTEEEEEE-T-TEEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcE---------------EEEE-CCCcceEEEE-------eCCCeEEEEE-C-CCEEEEE
Confidence 46778888889999999987531 1222 2457899999 7888777754 3 4599999
Q ss_pred CCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC----CcEEEeeeccCCCeeeEeeeee
Q 021036 164 GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS----GSFDLWKCDISCNKFDKVGSYN 239 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d----g~i~vw~~~~~~~~~~~~~~~~ 239 (318)
..+++.......... .....++.+.++ |+|+++++...+ +...||.++ +++... +.
T Consensus 116 ~~~g~~~~~~~~~~~----------~~~~~~~~i~~d-----~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~---~~ 175 (326)
T 2ghs_A 116 TATGVLTLHAELESD----------LPGNRSNDGRMH-----PSGALWIGTMGRKAETGAGSIYHVA--KGKVTK---LF 175 (326)
T ss_dssp TTTCCEEEEECSSTT----------CTTEEEEEEEEC-----TTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE---EE
T ss_pred CCCCcEEEEeeCCCC----------CCCCCCCCEEEC-----CCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE---ee
Confidence 887764322211000 012257889998 899876655422 234555446 344322 22
Q ss_pred cccCceeEEEEcCCCCEEE-EecCCCcEEEEEec
Q 021036 240 AHDQVVTGLAWAFDGCCLY-SCSQDNFVRSWIFH 272 (318)
Q Consensus 240 ~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~ 272 (318)
.+......++|+|+++.++ +.+.++.|.+||+.
T Consensus 176 ~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 176 ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 2334567899999998664 44567899999986
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.87 E-value=5.2e-07 Score=76.47 Aligned_cols=218 Identities=8% Similarity=-0.099 Sum_probs=125.0
Q ss_pred CCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecC--CCcEEEEEcc
Q 021036 25 KSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGR--SGKVSLWRIC 102 (318)
Q Consensus 25 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~--dg~i~iw~~~ 102 (318)
.++.|.+||..+.+.+..+....-.....-.....+.++|++ ++++++.. ++.|.++|..
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG------------------k~lyVan~~~~~~VsVID~~ 168 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDG------------------KTLLFYQFSPAPAVGVVDLE 168 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTS------------------SEEEEEECSSSCEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCC------------------CEEEEEEcCCCCeEEEEECC
Confidence 467899999999887666653210000000011125566665 88777753 6899999999
Q ss_pred CCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC-cceeeeecccccccc
Q 021036 103 VPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI-QELQKSAEAHCVPFS 181 (318)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~ 181 (318)
+++ .+.++.-.. . ...+ +...+.+++.+.||++.+.++.. ++...... ..+.
T Consensus 169 t~~--------------vv~tI~v~g--~-~~~~-------P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~---~~~~ 221 (386)
T 3sjl_D 169 GKA--------------FKRMLDVPD--C-YHIF-------PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT---EVFH 221 (386)
T ss_dssp TTE--------------EEEEEECCS--E-EEEE-------EEETTEEEEEETTSCEEEEECCSSSCCEEEEC---CCCS
T ss_pred CCc--------------EEEEEECCC--c-ceee-------cCCCceeEEECCCCCEEEEECCCCCeEEEeec---ceec
Confidence 854 444443211 1 2234 34456777888999999999876 55422111 1110
Q ss_pred cceeeeeeccccee-EEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeee---------c-ccCceeEEEE
Q 021036 182 LLKEVVTVNTVPIS-VLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN---------A-HDQVVTGLAW 250 (318)
Q Consensus 182 ~~~~~~~~~~~~v~-~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---------~-h~~~v~~~~~ 250 (318)
....++. ...|. +++|++++ .+.+|.|++.| ..+.....+..+. + .......+++
T Consensus 222 -------~~~~~~~~~~~~~----~~dG~~~~-vs~~g~V~v~d--~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~ 287 (386)
T 3sjl_D 222 -------PEDEFLINHPAYS----QKAGRLVW-PTYTGKIHQID--LSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY 287 (386)
T ss_dssp -------CTTSCBCSCCEEE----TTTTEEEE-EBTTSEEEEEE--CTTSSCEECCCEESSCHHHHHTTEEECSSSCEEE
T ss_pred -------cccccccccceeE----cCCCcEEE-EeCCCEEEEEE--CCCCcceeecceeccccccccccccCCCcceeeE
Confidence 0111111 22443 26786665 44489999984 4443322232221 0 1233445788
Q ss_pred cCCCCEEEEecC----------CCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc-EEEEE
Q 021036 251 AFDGCCLYSCSQ----------DNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL-VVAMV 316 (318)
Q Consensus 251 ~~~~~~l~s~~~----------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~~~ 316 (318)
+++++.++.... ...|.++|+.+++......-. ..+++++++||++ +|.+.
T Consensus 288 ~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg---------------~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 288 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG---------------HEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---------------EEECEEEECSSSSCEEEEE
T ss_pred CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---------------CCcceEEECCCCCeEEEEE
Confidence 999887766532 257999999987765433222 2678999999996 55553
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=1.7e-07 Score=86.69 Aligned_cols=197 Identities=12% Similarity=-0.043 Sum_probs=113.5
Q ss_pred eeecccccCCCCcccccccCCCCCccEEEE-----ecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEE
Q 021036 60 VAWSPVLRLSSKKYPVPQNGSSNWFSILAV-----GGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSI 134 (318)
Q Consensus 60 ~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~-----g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 134 (318)
+.++|+..-.+|...+..+.+||+|++||. |+.+..|++||+++++.. .. .+.. .....+
T Consensus 116 vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~------------~~-~~~~--~k~~~~ 180 (693)
T 3iuj_A 116 VFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL------------ET-PLKD--VKFSGI 180 (693)
T ss_dssp EEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE------------EE-EEEE--EESCCC
T ss_pred EEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC------------cc-ccCC--ceeccE
Confidence 334444433445566777778888898884 334467999999987632 11 1111 113567
Q ss_pred EeeeecCCCCCCCcEEEEEeCCCc-------------EEEEECCCccee--eeecccccccccceeeeeecccceeEEEE
Q 021036 135 SLAVLSSDSSNPQVLLVTGSSDGS-------------VRIWDGYIQELQ--KSAEAHCVPFSLLKEVVTVNTVPISVLSL 199 (318)
Q Consensus 135 ~~~p~~~~~~~~~~~l~s~~~d~~-------------v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 199 (318)
+| + +++.|+.++.+.. |++|++.++... ..+.... .+...+..+.+
T Consensus 181 ~W-------s-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~-----------~~~~~~~~~~~ 241 (693)
T 3iuj_A 181 SW-------L-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP-----------AQHHRYVGATV 241 (693)
T ss_dssp EE-------E-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG-----------GGCCSEEEEEE
T ss_pred EE-------e-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCC-----------CCCeEEEEEEE
Confidence 89 8 8988888887743 999998765431 1111110 01123567788
Q ss_pred eeccCCCCceEEEEEeC----CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEE-EEecCC---CcEEEEEe
Q 021036 200 ILPVQSPRLMLLAVGKG----SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCL-YSCSQD---NFVRSWIF 271 (318)
Q Consensus 200 ~~~~~~~~~~~l~~~~~----dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d---~~v~iwd~ 271 (318)
+ |+|++|+.... +..|++++++.....+ ..+..+....... |+++|..| +....+ +.|..+|+
T Consensus 242 S-----pDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~---~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~ 312 (693)
T 3iuj_A 242 T-----EDDRFLLISAANSTSGNRLYVKDLSQENAPL---LTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDA 312 (693)
T ss_dssp C-----TTSCEEEEEEESSSSCCEEEEEETTSTTCCC---EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEET
T ss_pred c-----CCCCEEEEEEccCCCCcEEEEEECCCCCCce---EEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 8 99987765442 2467887443222232 2344455555554 66666644 444433 67889998
Q ss_pred cCCce---eeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 272 HGNSL---SQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 272 ~~~~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
.++.. ..+..+.. .+. .|++++++|+..
T Consensus 313 ~~~~~~~~~~l~~~~~---------------~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 313 ANPGPAHWRDLIPERQ---------------QVL--TVHSGSGYLFAE 343 (693)
T ss_dssp TSCCGGGCEEEECCCS---------------SCE--EEEEETTEEEEE
T ss_pred CCCCccccEEEecCCC---------------CEE--EEEEECCEEEEE
Confidence 77543 33332221 233 788877776643
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.81 E-value=4.1e-06 Score=71.34 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=52.6
Q ss_pred EEEeeccCCCCceEEEEEeC----------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC-EEEEec-CCC
Q 021036 197 LSLILPVQSPRLMLLAVGKG----------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCS-QDN 264 (318)
Q Consensus 197 l~~~~~~~~~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~-~d~ 264 (318)
+.++ |+++.++++.. ++.|.++ |..+.+ .+.++.. .....++.|+|||+ .++++. .++
T Consensus 272 ~~~s-----~d~~~lyV~~~~~~~~~~~~~~~~V~VI--D~~t~~--vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~ 341 (373)
T 2mad_H 272 VAYL-----KSSDGIYLLTSEQSAWKLHAAAKEVTSV--TGLVGQ--TSSQISL-GHDVDAISVAQDGGPDLYALSAGTE 341 (373)
T ss_pred EEEC-----CCCCEEEEEeccCCcccccCCCCeEEEE--ECCCCE--EEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCC
Confidence 5666 77777777653 2457776 666665 5555543 33578999999999 777776 589
Q ss_pred cEEEEEecCCceeee
Q 021036 265 FVRSWIFHGNSLSQV 279 (318)
Q Consensus 265 ~v~iwd~~~~~~~~~ 279 (318)
.|.++|+.+++....
T Consensus 342 ~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 342 VLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCCCCEEee
Confidence 999999998776644
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=8.2e-07 Score=74.78 Aligned_cols=163 Identities=7% Similarity=-0.028 Sum_probs=94.9
Q ss_pred cccCCCCCccEEEEec--CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 76 PQNGSSNWFSILAVGG--RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 76 ~~~~~s~~~~~l~~g~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
..++++++|+++++.. .++.++||.+.+++... .+. . ......+...+.++++ .++++++++-
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~-----~p~-~--~~~~~~~~~~p~gv~~-------d~~g~L~v~D 84 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIP-----FPP-Q--SGNAIITFDTVLGIKS-------DGNGIVWMLD 84 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEE-----SCC-C--CSSCCCCCSCEEEEEE-------CSSSEEEEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCceEEEEECCCCeec-----CCC-c--ccCcccceeEeeEEEE-------cCCCcEEEEc
Confidence 3445555558888853 23436666665432110 000 0 0112235568999999 8888777765
Q ss_pred eC-----CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEe---CCCcEEEee
Q 021036 154 SS-----DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGK---GSGSFDLWK 224 (318)
Q Consensus 154 ~~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~---~dg~i~vw~ 224 (318)
.. ++.|.+||+.+++....+...... ..+...+..++++ ++ +..+++.. .++.|.+|+
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--------~~~~~~~~~v~vd-----~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--------TLSNSFVNDLAVD-----LIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEEEEEEECCTTT--------SCTTCCCCEEEEE-----TTTTEEEEEECCSGGGCEEEEEE
T ss_pred CCCCcCCCCeEEEEECCCCeEEEEEECChhh--------cccccccceEEEe-----cCCCEEEEEcCccCCCCeEEEEE
Confidence 44 579999999988866655432110 0112346789998 65 45555554 678899995
Q ss_pred eccCCCeeeEeeeeecc-----------------------------cCceeEEEEcCCCCEEEEecCCC-cEEEEE
Q 021036 225 CDISCNKFDKVGSYNAH-----------------------------DQVVTGLAWAFDGCCLYSCSQDN-FVRSWI 270 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~h-----------------------------~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd 270 (318)
..+++. ...+.+| ...+..++|+|+|+.|+.+..++ .+..++
T Consensus 152 --~~~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 152 --LQTGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp --TTTCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred --CCCCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 444331 1111111 12357899999999888877666 444444
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.74 E-value=2.6e-06 Score=68.37 Aligned_cols=181 Identities=13% Similarity=0.038 Sum_probs=106.6
Q ss_pred cEEEEecC--CCcEEEEEccCCccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEE
Q 021036 85 SILAVGGR--SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRI 161 (318)
Q Consensus 85 ~~l~~g~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~i 161 (318)
.++++.+. ++.|++.|..+++. +..+. +.......+++ . ++++.++.-.++.+.+
T Consensus 33 ~Lyvstg~~~~s~v~~iD~~tg~v--------------~~~i~l~~~~fgeGi~~-------~-g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 33 TLFESTGLYGRSSVRQVALQTGKV--------------ENIHKMDDSYFGEGLTL-------L-NEKLYQVVWLKNIGFI 90 (266)
T ss_dssp EEEEEECSTTTCEEEEEETTTCCE--------------EEEEECCTTCCEEEEEE-------E-TTEEEEEETTCSEEEE
T ss_pred eEEEECCCCCCCEEEEEECCCCCE--------------EEEEecCCCcceEEEEE-------e-CCEEEEEEecCCEEEE
Confidence 55555543 67999999999763 33332 11122345666 3 2344555556899999
Q ss_pred EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec-
Q 021036 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA- 240 (318)
Q Consensus 162 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~- 240 (318)
+|..+.+.+..+... . + ....++ ++|+.++++..++.|.++ |..+.+ .+.++.-
T Consensus 91 iD~~t~~v~~~i~~g-~--------------~-~g~glt-----~Dg~~l~vs~gs~~l~vi--D~~t~~--v~~~I~Vg 145 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ-M--------------K-DGWGLA-----TDGKILYGSDGTSILYEI--DPHTFK--LIKKHNVK 145 (266)
T ss_dssp EETTTTEEEEEEECC-S--------------S-SCCEEE-----ECSSSEEEECSSSEEEEE--CTTTCC--EEEEEECE
T ss_pred EECCCCcEEEEEECC-C--------------C-CeEEEE-----ECCCEEEEECCCCeEEEE--ECCCCc--EEEEEEEC
Confidence 999999888777533 1 0 112345 567777777778888887 666655 3333332
Q ss_pred -cc---CceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee-cCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 241 -HD---QVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS-IPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 241 -h~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
.. ..+..+.|. +|..++....++.|.+.|..+++..... .....+.. ......-....++++|+|+++.+.+
T Consensus 146 ~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~--~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 146 YNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKL--IDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHH--HHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred CCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccc--ccccccccCceEEEEEcCCCCEEEE
Confidence 11 235678888 7766666667889999999988764322 21000000 0000001125689999998765443
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.71 E-value=1.7e-09 Score=92.26 Aligned_cols=144 Identities=12% Similarity=0.059 Sum_probs=75.8
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD 163 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd 163 (318)
+..+++++.||.|+.||..+|+ .+..+.. +.+.+..+ ..++..+++++.|+.|+.||
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~--------------~~W~~~~--~~~~s~p~-------~~~g~~~v~~s~dg~l~a~d 65 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGS--------------IKWTLKE--DPVLQVPT-------HVEEPAFLPDPNDGSLYTLG 65 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCC--------------EEEEEEC--CCSCCCC------------CCEEECTTTCCEEEC-
T ss_pred CCEEEEEcCCCEEEEEECCCCC--------------EEEEecC--CCceecce-------EcCCCEEEEeCCCCEEEEEE
Confidence 5789999999999999999865 3333433 34444333 45666788888999999999
Q ss_pred CCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccC
Q 021036 164 GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQ 243 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~ 243 (318)
..+|+.+.....+.... ....++ + ..+..+++++.++.++.| |.++++ .+.++..+.
T Consensus 66 ~~tG~~~w~~~~~~~~~--------~~~sp~----~------~~~~~v~~g~~dg~v~a~--D~~tG~--~~w~~~~~~- 122 (369)
T 2hz6_A 66 SKNNEGLTKLPFTIPEL--------VQASPC----R------SSDGILYMGKKQDIWYVI--DLLTGE--KQQTLSSAF- 122 (369)
T ss_dssp ----CCSEECSCCHHHH--------HTTCSC----C-----------CCCCEEEEEEEEE--CCC---------------
T ss_pred CCCCceeeeeeccCccc--------cccCce----E------ecCCEEEEEeCCCEEEEE--ECCCCc--EEEEecCCC-
Confidence 99888766544321100 000011 1 134577888889999999 677776 444444332
Q ss_pred ceeEEEEcCCCCEEEEecCCCcEEEEEecCCce
Q 021036 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 244 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 276 (318)
...++|++..+++++.|+.|+.||.++++.
T Consensus 123 ---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 123 ---ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp -------------EEEEEEEEEEECCCSSSSSC
T ss_pred ---cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 234567888899999999999999987654
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.67 E-value=9.8e-06 Score=69.50 Aligned_cols=203 Identities=9% Similarity=0.061 Sum_probs=119.1
Q ss_pred ccCCC--CCccE-EEEecCCCcEEEEEccCCccccccccccCCceeEEeeec------c-ccccEEEEEeeeecCCCCCC
Q 021036 77 QNGSS--NWFSI-LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ------A-HNSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 77 ~~~~s--~~~~~-l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~------~-h~~~v~~~~~~p~~~~~~~~ 146 (318)
+..++ .++++ ++.|..++.|.++|+.+.... .+..+.+. . -...-..+.. .++
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~----------p~~~k~ie~~~~~~~~g~s~Ph~~~~-------~pd 148 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPRE----------PKIIKVIEPEEVKKVSGYSRLHTVHC-------GPD 148 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTS----------CEEEEEECHHHHHHHHCEEEEEEEEE-------CSS
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCCC----------ceeeeeechhhcccccCCCcccceeE-------CCC
Confidence 33445 55555 555778899999999753211 34445442 0 1113344555 788
Q ss_pred CcEEEEEeCC------CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-----
Q 021036 147 QVLLVTGSSD------GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK----- 215 (318)
Q Consensus 147 ~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~----- 215 (318)
| +++++..+ +.|.+.|..+++.+..+.....+ ..--+.+-|+ |+++.+++..
T Consensus 149 G-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~-----------~~~~Yd~~~~-----p~~~~mvsS~wg~p~ 211 (462)
T 2ece_A 149 A-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD-----------QYLAYDFWWN-----LPNEVLVSSEWAVPN 211 (462)
T ss_dssp C-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT-----------CCCCCCEEEE-----TTTTEEEECBCCCHH
T ss_pred e-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC-----------ccccceEEEC-----CCCCEEEEccCcCcc
Confidence 8 77776655 78999999999888877643221 1122356677 8999888885
Q ss_pred --------------CCCcEEEeeeccCCCeeeEeeeeecc--cCceeEEEE--cCCCCEEEEec------CCCcEEEEEe
Q 021036 216 --------------GSGSFDLWKCDISCNKFDKVGSYNAH--DQVVTGLAW--AFDGCCLYSCS------QDNFVRSWIF 271 (318)
Q Consensus 216 --------------~dg~i~vw~~~~~~~~~~~~~~~~~h--~~~v~~~~~--~~~~~~l~s~~------~d~~v~iwd~ 271 (318)
...+|.+||++ +++ .+.++... ......+.| +|+++++..++ .+++|.+|..
T Consensus 212 ~~~~g~~~~~~~~~~~d~V~v~D~~--~~k--~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 212 TIEDGLKLEHLKDRYGNRIHFWDLR--KRK--RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp HHTTCCCTTTHHHHSCCEEEEEETT--TTE--EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred ccccccchhhhhhccCCEEEEEECC--CCc--EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 36889999554 444 44454432 123445555 99999877666 5678988877
Q ss_pred cCCceeeeec---CCC--CCCcc-ccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 272 HGNSLSQVSI---PTN--TPGLQ-SCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 272 ~~~~~~~~~~---~~~--~~~~~-~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
..+....... ... ...+. -...+.+-......+.+||||++|.++.
T Consensus 288 d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn 339 (462)
T 2ece_A 288 EDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL 339 (462)
T ss_dssp ETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE
T ss_pred cCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEe
Confidence 6544322211 110 00000 0000000012467899999999987753
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.65 E-value=2.8e-06 Score=71.96 Aligned_cols=74 Identities=9% Similarity=-0.007 Sum_probs=51.7
Q ss_pred EEEeeccCCCCceEEEEEeC-C--------CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC-EEEEec-CCCc
Q 021036 197 LSLILPVQSPRLMLLAVGKG-S--------GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCS-QDNF 265 (318)
Q Consensus 197 l~~~~~~~~~~~~~l~~~~~-d--------g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~-~d~~ 265 (318)
+.++ |+++.++++.. + +.+.++ |..+.+ .+.++.... ....+.|+|||+ .+++.. .++.
T Consensus 269 v~~s-----~dg~~lyV~~~~~~~~~~~~~~~~~Vi--D~~t~~--vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 269 VAKL-----KNTDGIMILTVEHSRSCLAAAENTSSV--TASVGQ--TSGPISNGH-DSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp EEEE-----TTTTEEEEEEEECSSCTTSCEEEEEEE--ESSSCC--EEECCEEEE-EECEEEECCSSSCEEEEEETTTTE
T ss_pred eEEc-----CCCCEEEEEeccccCcccccCCCEEEE--ECCCCe--EEEEEECCC-CcceEEECCCCCEEEEEccCCCCe
Confidence 5677 78877776543 2 345587 666665 455554333 578999999998 556666 5899
Q ss_pred EEEEEecCCceeeee
Q 021036 266 VRSWIFHGNSLSQVS 280 (318)
Q Consensus 266 v~iwd~~~~~~~~~~ 280 (318)
|.++|+.+.+.....
T Consensus 339 VsVID~~t~kvv~~I 353 (368)
T 1mda_H 339 LDIYDAASDQDQSSV 353 (368)
T ss_dssp EEEEESSSCEEEEEC
T ss_pred EEEEECCCCcEEEEE
Confidence 999999998766433
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.63 E-value=8.9e-06 Score=74.84 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=77.3
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeeccccccccc----ceeeee-------ec----------ccceeEEEEeeccCCC
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSL----LKEVVT-------VN----------TVPISVLSLILPVQSP 206 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~-------~~----------~~~v~~l~~~~~~~~~ 206 (318)
..++.++.+|.+.++|..+|+.+..+.....++.. ...... .. ...-..++++ |
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d-----p 402 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN-----P 402 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE-----T
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc-----C
Confidence 67999999999999999999988765432211100 000000 00 0001246777 7
Q ss_pred CceEEEEEeCC-------------------------------------------CcEEEeeeccCCCeeeEeeeeecccC
Q 021036 207 RLMLLAVGKGS-------------------------------------------GSFDLWKCDISCNKFDKVGSYNAHDQ 243 (318)
Q Consensus 207 ~~~~l~~~~~d-------------------------------------------g~i~vw~~~~~~~~~~~~~~~~~h~~ 243 (318)
+..++++...+ |.|..| |..+++ .+.+.. +..
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~--D~~tG~--~~W~~~-~~~ 477 (677)
T 1kb0_A 403 QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAW--DPVAQK--AAWSVE-HVS 477 (677)
T ss_dssp TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEE--ETTTTE--EEEEEE-ESS
T ss_pred CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEE--eCCCCc--EEeecC-CCC
Confidence 77777665431 668888 667776 444443 334
Q ss_pred ceeEEEEcCCCCEEEEecCCCcEEEEEecCCceee
Q 021036 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQ 278 (318)
Q Consensus 244 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 278 (318)
++....+...+..++.++.||.++.||.++++..-
T Consensus 478 ~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 478 PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 45555667778888889999999999999877653
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.63 E-value=4.7e-06 Score=66.27 Aligned_cols=182 Identities=14% Similarity=0.073 Sum_probs=107.1
Q ss_pred ccEEEEecCCC--cEEEEEccCCccccccccccCCceeEEeeeccccc-cEEEEEeeeecCCCCCCCcEEEEEeCCCcEE
Q 021036 84 FSILAVGGRSG--KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS-WITSISLAVLSSDSSNPQVLLVTGSSDGSVR 160 (318)
Q Consensus 84 ~~~l~~g~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~ 160 (318)
+.++.+.+.+| .|+.+|+++++. ++.+..... .--.+.. . ++++.++.-.++.+.
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv--------------~~~~~l~~~~FgeGit~-------~-g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKT--------------LQQIELGKRYFGEGISD-------W-KDKIVGLTWKNGLGF 110 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCE--------------EEEEECCTTCCEEEEEE-------E-TTEEEEEESSSSEEE
T ss_pred CEEEEECCCCCCceEEEEECCCCcE--------------EEEEecCCccceeEEEE-------e-CCEEEEEEeeCCEEE
Confidence 36777777766 899999999763 333322111 1233554 2 234444444689999
Q ss_pred EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec
Q 021036 161 IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 161 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
++|..+.+.+.++..... ...++ ++++.|+.++.++.|.++ |..+.+ .+.++..
T Consensus 111 v~D~~t~~~~~ti~~~~e-----------------G~glt-----~dg~~L~~SdGs~~i~~i--Dp~T~~--v~~~I~V 164 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGE-----------------GWGLT-----HNDQYLIMSDGTPVLRFL--DPESLT--PVRTITV 164 (262)
T ss_dssp EEETTTCCEEEEEECSSC-----------------CCCEE-----ECSSCEEECCSSSEEEEE--CTTTCS--EEEEEEC
T ss_pred EEECccCcEEEEEECCCC-----------------ceEEe-----cCCCEEEEECCCCeEEEE--cCCCCe--EEEEEEe
Confidence 999999998888764321 12233 456666666667778887 666655 3333332
Q ss_pred --cc---CceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc-EEE
Q 021036 241 --HD---QVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL-VVA 314 (318)
Q Consensus 241 --h~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~ 314 (318)
.. ..+..+.|. +|+..+..-.+..|.+.|..+++........... ........-....+++||+|+++ +++
T Consensus 165 ~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~--~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 165 TAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGIL--AEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGG--GGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred ccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCc--cccccccCcCCceEEEEEcCCCCEEEE
Confidence 12 234457776 6766666667889999999998875433221100 00000011123678999999654 555
Q ss_pred EE
Q 021036 315 MV 316 (318)
Q Consensus 315 ~~ 316 (318)
+|
T Consensus 242 TG 243 (262)
T 3nol_A 242 TG 243 (262)
T ss_dssp EE
T ss_pred EC
Confidence 54
No 229
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.61 E-value=7.5e-06 Score=65.13 Aligned_cols=182 Identities=13% Similarity=0.088 Sum_probs=110.6
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWD 163 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd 163 (318)
+.++.+.+.+|.|+++|+++++... .+ +.. ...-..++. . ++++.++.-.++.+.++|
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~-----------~~--l~~-~~FgeGit~-------~-g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVW-----------ME--RLG-NIFAEGLAS-------D-GERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSE-----------EE--ECT-TCCEEEEEE-------C-SSCEEEEESSSCEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEe-----------EE--CCC-CcceeEEEE-------e-CCEEEEEEccCCEEEEEE
Confidence 3678888889999999999977531 11 222 112234555 3 334555555789999999
Q ss_pred CCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec--c
Q 021036 164 GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA--H 241 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--h 241 (318)
..+.+.+.++..... + ..++ ++++.|+.++.++.|.++ |..+.+ .+.++.. +
T Consensus 123 ~~Tl~~~~ti~~~~e--------------G-wGLt-------~Dg~~L~vSdGs~~l~~i--Dp~T~~--v~~~I~V~~~ 176 (268)
T 3nok_A 123 GMPPQRERTTRYSGE--------------G-WGLC-------YWNGKLVRSDGGTMLTFH--EPDGFA--LVGAVQVKLR 176 (268)
T ss_dssp TTTTEEEEEEECSSC--------------C-CCEE-------EETTEEEEECSSSEEEEE--CTTTCC--EEEEEECEET
T ss_pred CCcCcEEEEEeCCCc--------------e-eEEe-------cCCCEEEEECCCCEEEEE--cCCCCe--EEEEEEeCCC
Confidence 999998888764321 1 2333 356677777778888887 666655 3333332 2
Q ss_pred cC---ceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCC-CCCCccccccCCCcceeeeEEEEcCC-CcEEEEE
Q 021036 242 DQ---VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPT-NTPGLQSCTDLPDAFVSCLGMAVSPG-NLVVAMV 316 (318)
Q Consensus 242 ~~---~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~~~ 316 (318)
.. .+..+.|. +|+.++..-.+..|.+.|..+++........ -.+. .......-....+++|++|+ .++++||
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~--~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRA--VAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHH--HTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCccc--ccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 22 34567776 7766666667889999999998765332111 0000 00000111236789999995 4566665
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.60 E-value=1.3e-05 Score=63.09 Aligned_cols=181 Identities=11% Similarity=0.037 Sum_probs=106.6
Q ss_pred cEEEEecCCC--cEEEEEccCCccccccccccCCceeEEeeeccccc-cEEEEEeeeecCCCCCCCcEEEEEeCCCcEEE
Q 021036 85 SILAVGGRSG--KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNS-WITSISLAVLSSDSSNPQVLLVTGSSDGSVRI 161 (318)
Q Consensus 85 ~~l~~g~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~i 161 (318)
.++.+.+.+| .|+.+|+++++. ++...-... .--.++. . ++++.+..-.++.+.+
T Consensus 32 ~LyestG~~g~S~v~~vD~~tgkv--------------~~~~~l~~~~fgeGi~~-------~-~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 32 HLYESTGETGRSSVRKVDLETGRI--------------LQRAEVPPPYFGAGIVA-------W-RDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEEECCTTSCEEEEEETTTCCE--------------EEEEECCTTCCEEEEEE-------E-TTEEEEEESSSSEEEE
T ss_pred EEEEECCCCCCceEEEEECCCCCE--------------EEEEeCCCCcceeEEEE-------e-CCEEEEEEeeCCEEEE
Confidence 5667767654 899999999763 333322111 1133444 2 3445555556899999
Q ss_pred EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec-
Q 021036 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA- 240 (318)
Q Consensus 162 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~- 240 (318)
+|..+.+.+.++..... + ..++ +++..|+++..++.|.++ |..+.+ .+.++.-
T Consensus 90 ~D~~tl~~~~ti~~~~~--------------G-wglt-------~dg~~L~vSdgs~~l~~i--Dp~t~~--~~~~I~V~ 143 (243)
T 3mbr_X 90 YDLATLTPRARFRYPGE--------------G-WALT-------SDDSHLYMSDGTAVIRKL--DPDTLQ--QVGSIKVT 143 (243)
T ss_dssp EETTTTEEEEEEECSSC--------------C-CEEE-------ECSSCEEEECSSSEEEEE--CTTTCC--EEEEEECE
T ss_pred EECCcCcEEEEEeCCCC--------------c-eEEe-------eCCCEEEEECCCCeEEEE--eCCCCe--EEEEEEEc
Confidence 99999998888764321 1 2333 356666666678888887 666655 3334332
Q ss_pred -cc---CceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee-cCCCCCCccccccCCCcceeeeEEEEcCCC-cEEE
Q 021036 241 -HD---QVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS-IPTNTPGLQSCTDLPDAFVSCLGMAVSPGN-LVVA 314 (318)
Q Consensus 241 -h~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~ 314 (318)
+. ..+..+.|. +|+.++..-.+..|.+.|..+++..... ...-.+... .....-....+++|++|++ ++++
T Consensus 144 ~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~--~~~~~~~~vlNGIA~d~~~~~lfV 220 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDAD--ALTDSTNDVLNGIAFDAEHDRLFV 220 (243)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTT--SCCCTTSSCEEEEEEETTTTEEEE
T ss_pred cCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccc--cccCCcCCceEEEEEcCCCCEEEE
Confidence 22 234556665 6666666656789999999998765432 221100000 0001122467899999964 5566
Q ss_pred EE
Q 021036 315 MV 316 (318)
Q Consensus 315 ~~ 316 (318)
+|
T Consensus 221 TG 222 (243)
T 3mbr_X 221 TG 222 (243)
T ss_dssp EE
T ss_pred EC
Confidence 55
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.59 E-value=2.7e-06 Score=75.45 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=67.2
Q ss_pred ceeEEEEeeccCCCCceEEEEEe-CCCcEEEeeeccCC----Ce----eeEeeeeecccCceeEEEEcCCCCEEEEecCC
Q 021036 193 PISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCDISC----NK----FDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD 263 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~~----~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 263 (318)
...++.++ |||+++++++ .+.+|.++|++... ++ ...+.+.. -......++|+|+|...++.-.|
T Consensus 278 ~PhGv~~s-----PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ld 351 (595)
T 1fwx_A 278 NPHGCNMA-----PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLD 351 (595)
T ss_dssp SCCCEEEC-----TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTT
T ss_pred CceEEEEc-----CCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecC
Confidence 45678888 9999777766 78889999654210 00 01222332 22456889999999555667789
Q ss_pred CcEEEEEecCC----------c-eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 264 NFVRSWIFHGN----------S-LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 264 ~~v~iwd~~~~----------~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
++|..||+... . +.++..+.. ++|...-.++.++|||++|++..
T Consensus 352 sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq----------pGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 352 SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ----------PGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC----------EEEEEETTTTSTTCCSSEEEEEE
T ss_pred CcEEEEEhhHhhhhhcccccceeEEEeecccc----------cccceeccceEeCCCCCEEEEcC
Confidence 99999998761 1 112222211 12333334556789999988753
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.59 E-value=1.3e-05 Score=73.97 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=39.6
Q ss_pred CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 218 GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 218 g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
|.|+.| |..+++ .+.++..+ .++..-.+...+.+++.++.||.++.||.++++..
T Consensus 455 g~l~A~--D~~tG~--~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 455 GKLIAW--DPVKQQ--AAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEE--ETTTTE--EEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eeEEEE--ECCCCC--eEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 668888 677776 44444433 33344456667788999999999999999998765
No 233
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.59 E-value=2e-05 Score=66.82 Aligned_cols=198 Identities=9% Similarity=0.030 Sum_probs=111.4
Q ss_pred CCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEEccC-C
Q 021036 26 SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICV-P 104 (318)
Q Consensus 26 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~-~ 104 (318)
++.|.++|+.+++.+..+.... |....|.+ .+.+++.+.||++.+.+..+ +
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g-----------~~~~~P~g-----------------~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPD-----------CYHIFPTA-----------------PDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCS-----------EEEEEEEE-----------------TTEEEEEETTSCEEEEECCSSS
T ss_pred CCeEEEEECCCCcEEEEEECCC-----------cceeecCC-----------------CceeEEECCCCCEEEEECCCCC
Confidence 6889999999988777665422 11122444 35666777899988888875 3
Q ss_pred ccccccccccCCceeEEeeeccccccEE-EEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcce--eeeecccccccc
Q 021036 105 KCYSVEDCKVPTTAVLIGLFQAHNSWIT-SISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQEL--QKSAEAHCVPFS 181 (318)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~ 181 (318)
+... .....+.....++. ...| ..++|++++ .+.+|+|.+.|+.++.. ...+.....
T Consensus 211 ~v~~----------~~~~~~~~~~~~~~~~~~~------~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~--- 270 (386)
T 3sjl_D 211 TPEI----------THTEVFHPEDEFLINHPAY------SQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE--- 270 (386)
T ss_dssp CCEE----------EECCCCSCTTSCBCSCCEE------ETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCH---
T ss_pred eEEE----------eecceecccccccccccee------EcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccc---
Confidence 3210 00000111111221 1244 135675555 55589999999976542 222210000
Q ss_pred cceeeeeecccceeEEEEeeccCCCCceEEEEEeC--------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC
Q 021036 182 LLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG--------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253 (318)
Q Consensus 182 ~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~--------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 253 (318)
..............++++ ++++.++.... +..=.||-+|..+.+ .+.++.. ...+..+.+++|
T Consensus 271 -~~~~~g~~p~g~q~~a~~-----~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--v~~~i~v-g~~~~~lavs~D 341 (386)
T 3sjl_D 271 -AERADGWRPGGWQQVAYH-----RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--RLAKFEM-GHEIDSINVSQD 341 (386)
T ss_dssp -HHHHTTEEECSSSCEEEE-----TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEE-EEEECEEEECSS
T ss_pred -ccccccccCCCcceeeEC-----CCCCeEEEEeccccccccCCCCCEEEEEECCCCe--EEEEEEC-CCCcceEEECCC
Confidence 000000011233456778 78877777643 112334444887877 4555542 236789999999
Q ss_pred CC-EEEE-ecCCCcEEEEEecCCceeeee
Q 021036 254 GC-CLYS-CSQDNFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 254 ~~-~l~s-~~~d~~v~iwd~~~~~~~~~~ 280 (318)
++ +|++ ...++.|.++|..+++.....
T Consensus 342 ~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 342 EKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp SSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 87 5655 456899999999988766543
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.52 E-value=3.1e-05 Score=61.59 Aligned_cols=179 Identities=11% Similarity=-0.099 Sum_probs=111.9
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGK 95 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~ 95 (318)
+.....+.+.++.+++.|+.+++.+..+ ........ .++. .+ +++......++.
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~Fge------Git~--~g-----------------~~Ly~ltw~~~~ 117 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAE------GLAS--DG-----------------ERLYQLTWTEGL 117 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEE------EEEE--CS-----------------SCEEEEESSSCE
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCccee------EEEE--eC-----------------CEEEEEEccCCE
Confidence 3455677788889999999999987776 42211001 0222 22 245566678999
Q ss_pred EEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 96 VSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 96 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
+.+||.++. +.+.++..-. .=+.+++ +++.|+.+..++.|.++|..+.+....+..
T Consensus 118 v~V~D~~Tl--------------~~~~ti~~~~-eGwGLt~---------Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 118 LFTWSGMPP--------------QRERTTRYSG-EGWGLCY---------WNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEEETTTT--------------EEEEEEECSS-CCCCEEE---------ETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEECCcC--------------cEEEEEeCCC-ceeEEec---------CCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 999999984 4555554322 2245555 456677666789999999999988877765
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec-----------ccCc
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA-----------HDQV 244 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-----------h~~~ 244 (318)
...+. .-..++.+.|. +|.+++....+..|.+. |.++++......+.+ -..-
T Consensus 174 ~~~g~---------~v~~lNeLe~~------dG~lyanvw~s~~I~vI--Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~v 236 (268)
T 3nok_A 174 KLRGQ---------PVELINELECA------NGVIYANIWHSSDVLEI--DPATGTVVGVIDASALTRAVAGQVTNPEAV 236 (268)
T ss_dssp EETTE---------ECCCEEEEEEE------TTEEEEEETTCSEEEEE--CTTTCBEEEEEECHHHHHHHTTTCCCTTCC
T ss_pred CCCCc---------ccccccccEEe------CCEEEEEECCCCeEEEE--eCCCCcEEEEEECCCCcccccccccCcCCc
Confidence 43211 01134566774 67766666567777776 788877333222221 1134
Q ss_pred eeEEEEcCCCC-EEEEec
Q 021036 245 VTGLAWAFDGC-CLYSCS 261 (318)
Q Consensus 245 v~~~~~~~~~~-~l~s~~ 261 (318)
...++|+|+++ +++||-
T Consensus 237 lNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 237 LNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEEECTTTCCEEEEET
T ss_pred eEEEEEcCCCCEEEEeCC
Confidence 67899999765 555553
No 235
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.52 E-value=4.5e-05 Score=65.71 Aligned_cols=73 Identities=7% Similarity=-0.017 Sum_probs=53.3
Q ss_pred EEEeeccCCCCceEEEEEeC----------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC-EEEEec-CCC
Q 021036 197 LSLILPVQSPRLMLLAVGKG----------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC-CLYSCS-QDN 264 (318)
Q Consensus 197 l~~~~~~~~~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~-~d~ 264 (318)
++++ ++++.+++... ++.|.++ |..+.+ .+.++.... ....+.|+|+|+ ++++.. .++
T Consensus 324 va~s-----~dg~rlyVa~~~~~~gthk~~s~~VsVI--D~~T~k--vv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 324 TAYH-----RQSDRIYLLVDQRDEWKHKAASRFVVVL--NAETGE--RINKIELGH-EIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp EEEE-----GGGTEEEEEEEECCTTCTTSCEEEEEEE--ETTTCC--EEEEEEEEE-EECEEEECCSSSCEEEEEETTTT
T ss_pred eEEc-----CCCCEEEEEecccccccccCCCCEEEEE--ECCCCe--EEEEEECCC-CcCeEEEccCCCEEEEEEcCCCC
Confidence 6777 78777776642 2457777 676766 555554322 478999999998 787777 589
Q ss_pred cEEEEEecCCceeee
Q 021036 265 FVRSWIFHGNSLSQV 279 (318)
Q Consensus 265 ~v~iwd~~~~~~~~~ 279 (318)
.|.++|+.+.+....
T Consensus 394 ~VsVID~~t~kvv~t 408 (426)
T 3c75_H 394 TLHIYDAATGEELRS 408 (426)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEE
Confidence 999999999876643
No 236
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.50 E-value=0.00013 Score=58.21 Aligned_cols=194 Identities=10% Similarity=0.092 Sum_probs=115.6
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeee--ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF--QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRI 161 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~i 161 (318)
+.++++...++.|...|.. ++ .++.+ .+ ......|++ ..++.++++.-.++.+.+
T Consensus 39 ~~L~aV~d~~~~I~~ld~~-g~--------------v~~~i~l~g-~~D~EGIa~-------~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 39 NTLFSTINKPAAIVEMTTN-GD--------------LIRTIPLDF-VKDLETIEY-------IGDNQFVISDERDYAIYV 95 (255)
T ss_dssp TEEEEEEETTEEEEEEETT-CC--------------EEEEEECSS-CSSEEEEEE-------CSTTEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCeEEEEeCC-CC--------------EEEEEecCC-CCChHHeEE-------eCCCEEEEEECCCCcEEE
Confidence 3566667788888888887 44 23333 22 245788999 778877777667789999
Q ss_pred EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc--CCCeeeEeee--
Q 021036 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI--SCNKFDKVGS-- 237 (318)
Q Consensus 162 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~-- 237 (318)
+++.....+........++ ...........|+++ |.++.|+++.......+|.++- ..........
T Consensus 96 ~~v~~~~~i~~~~~~~~~~-----~~~~~N~g~EGLA~d-----~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPL-----QESPTNCGFEGLAYS-----RQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp EEECTTCCEEEEEEEECCC-----SSCCCSSCCEEEEEE-----TTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred EEcCCCCeeeeeeeecccc-----ccccccCCcceEEEe-----CCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 9887554322111111000 001234467899999 8887777777666667775551 1111111100
Q ss_pred ee--cccCceeEEEEcCC-CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEE
Q 021036 238 YN--AHDQVVTGLAWAFD-GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVA 314 (318)
Q Consensus 238 ~~--~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~ 314 (318)
+. .+...+.+++++|. +++++.......+..+|..+.....+...+... .+..--..-.+|+|.++|.+.+
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~------~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSR------GLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGG------GCSSCCCSEEEEEECTTCCEEE
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccC------CcccccCCCCeeEECCCCCEEE
Confidence 00 12345789999996 567777778888999998776554444443211 1111112457999999998665
Q ss_pred EE
Q 021036 315 MV 316 (318)
Q Consensus 315 ~~ 316 (318)
+.
T Consensus 240 vs 241 (255)
T 3qqz_A 240 VS 241 (255)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.48 E-value=8.3e-05 Score=59.66 Aligned_cols=182 Identities=9% Similarity=-0.062 Sum_probs=114.5
Q ss_pred CCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCc
Q 021036 26 SKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPK 105 (318)
Q Consensus 26 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~ 105 (318)
+..+++.|+.+++.+..+......+.. .+++. + +.+.++...++.+.++|.++.+
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fge------Gi~~~--g-----------------~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGE------GLTLL--N-----------------EKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEE------EEEEE--T-----------------TEEEEEETTCSEEEEEETTTTE
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceE------EEEEe--C-----------------CEEEEEEecCCEEEEEECCCCc
Confidence 578999999999877766542211111 13332 2 2456666788999999999844
Q ss_pred cccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeeccccccccccee
Q 021036 106 CYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKE 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 185 (318)
.+..+..-...=..+++ +|+.|+++..+++|.++|..+.+....+.....+.
T Consensus 98 --------------v~~~i~~g~~~g~glt~---------Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~----- 149 (266)
T 2iwa_A 98 --------------NIKNFTHQMKDGWGLAT---------DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH----- 149 (266)
T ss_dssp --------------EEEEEECCSSSCCEEEE---------CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE-----
T ss_pred --------------EEEEEECCCCCeEEEEE---------CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc-----
Confidence 44555321111133544 45556666678999999999988777765432100
Q ss_pred eeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecc-------------cCceeEEEEcC
Q 021036 186 VVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAH-------------DQVVTGLAWAF 252 (318)
Q Consensus 186 ~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~ 252 (318)
.-..++.+.+. ++.+++....++.|.+. |..+++ .+..+.-. ......++|+|
T Consensus 150 ----p~~~~nele~~------dg~lyvn~~~~~~V~vI--D~~tg~--V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~ 215 (266)
T 2iwa_A 150 ----RVIRLNELEYI------NGEVWANIWQTDCIARI--SAKDGT--LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ 215 (266)
T ss_dssp ----ECCCEEEEEEE------TTEEEEEETTSSEEEEE--ETTTCC--EEEEEECHHHHHHHHHTTCTTCCCEEEEEEET
T ss_pred ----ccccceeEEEE------CCEEEEecCCCCeEEEE--ECCCCc--EEEEEECCCcccccccccccccCceEEEEEcC
Confidence 00124566765 56666665567888886 777776 34444311 13458999999
Q ss_pred CCC-EEEEecCCCcEEEEEecCC
Q 021036 253 DGC-CLYSCSQDNFVRSWIFHGN 274 (318)
Q Consensus 253 ~~~-~l~s~~~d~~v~iwd~~~~ 274 (318)
+++ +++++...+.|...++...
T Consensus 216 ~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 216 ENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCEEEEECCCCCeEEEEEEecc
Confidence 976 5667778889999988654
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.42 E-value=4.5e-05 Score=60.62 Aligned_cols=181 Identities=12% Similarity=0.047 Sum_probs=108.3
Q ss_pred ccceEEeeCCC--ceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCC
Q 021036 17 THPTVAASKSK--GNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSG 94 (318)
Q Consensus 17 ~~~~~t~s~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg 94 (318)
.....+.+.++ .+++.|+.+++.+..+......... .++. .+ +++......++
T Consensus 53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~Fge------Git~--~g-----------------~~ly~ltw~~~ 107 (262)
T 3nol_A 53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGE------GISD--WK-----------------DKIVGLTWKNG 107 (262)
T ss_dssp TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEE------EEEE--ET-----------------TEEEEEESSSS
T ss_pred CEEEEECCCCCCceEEEEECCCCcEEEEEecCCcccee------EEEE--eC-----------------CEEEEEEeeCC
Confidence 34455666665 8999999999887766542211000 0222 22 24555566789
Q ss_pred cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 95 KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 95 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
.+.++|.++.+ .+.++.-.... +.+++ +++.|+.+..++.|.++|..+.+....+.
T Consensus 108 ~v~v~D~~t~~--------------~~~ti~~~~eG-~glt~---------dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 108 LGFVWNIRNLR--------------QVRSFNYDGEG-WGLTH---------NDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEEEEETTTCC--------------EEEEEECSSCC-CCEEE---------CSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred EEEEEECccCc--------------EEEEEECCCCc-eEEec---------CCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 99999999844 45555432221 34555 45556666667889999999988887766
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecc----------cCc
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAH----------DQV 244 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h----------~~~ 244 (318)
...... .-..++.+.+. +|.+++..-.++.|.+. |.++++......+.+- ..-
T Consensus 164 V~~~g~---------~~~~lNELe~~------~G~lyan~w~~~~I~vI--Dp~tG~V~~~Id~~~L~~~~~~~~~~~~v 226 (262)
T 3nol_A 164 VTAHGE---------ELPELNELEWV------DGEIFANVWQTNKIVRI--DPETGKVTGIIDLNGILAEAGPLPSPIDV 226 (262)
T ss_dssp CEETTE---------ECCCEEEEEEE------TTEEEEEETTSSEEEEE--CTTTCBEEEEEECTTGGGGSCSCCSSCCC
T ss_pred eccCCc---------cccccceeEEE------CCEEEEEEccCCeEEEE--ECCCCcEEEEEECCcCccccccccCcCCc
Confidence 532100 01134456664 67766666567778776 7778773322222111 134
Q ss_pred eeEEEEcCCCCEEEEecCC
Q 021036 245 VTGLAWAFDGCCLYSCSQD 263 (318)
Q Consensus 245 v~~~~~~~~~~~l~s~~~d 263 (318)
...++|+|+++.|+..+..
T Consensus 227 lNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 227 LNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEEEETTTTEEEEEETT
T ss_pred eEEEEEcCCCCEEEEECCC
Confidence 5789999987766555443
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.37 E-value=0.00055 Score=55.05 Aligned_cols=169 Identities=9% Similarity=-0.049 Sum_probs=93.0
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-CcEEEEEeC--CCcEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP-QVLLVTGSS--DGSVR 160 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~-~~~l~s~~~--d~~v~ 160 (318)
+.++++-...+.|.+++.+.... +.+ ..........+++ .++ +.++++... .+.|.
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g~~~------------~~~--~~~~~~~P~~i~v-------d~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDGTQR------------RVL--FDTGLVNPRGIVT-------DPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC------------EEE--ECSSCSSEEEEEE-------ETTTTEEEEEECCSSSCEEE
T ss_pred CeEEEEECCCCEEEEEEcCCCCE------------EEE--EECCCCCccEEEE-------eeCCCEEEEEECCCCCcEEE
Confidence 35666666778899999864321 111 1111235688999 674 444444433 36888
Q ss_pred EEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceE-EEEEeCCCcEEEeeeccCCCeeeEeeeee
Q 021036 161 IWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLML-LAVGKGSGSFDLWKCDISCNKFDKVGSYN 239 (318)
Q Consensus 161 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 239 (318)
.+++.... ...+... .......++++ +++.. +++-...+.|.+++. ....... .+.
T Consensus 150 ~~~~dg~~-~~~~~~~-------------~~~~P~gia~d-----~~~~~lyv~d~~~~~I~~~~~--~g~~~~~--~~~ 206 (267)
T 1npe_A 150 TSHMDGTN-RRILAQD-------------NLGLPNGLTFD-----AFSSQLCWVDAGTHRAECLNP--AQPGRRK--VLE 206 (267)
T ss_dssp EEETTSCC-CEEEECT-------------TCSCEEEEEEE-----TTTTEEEEEETTTTEEEEEET--TEEEEEE--EEE
T ss_pred EEecCCCC-cEEEEEC-------------CCCCCcEEEEc-----CCCCEEEEEECCCCEEEEEec--CCCceEE--Eec
Confidence 88876432 2221100 11245788999 77554 455556778998854 3332111 122
Q ss_pred cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc
Q 021036 240 AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 240 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
+ ......++.. .+..+++....+.|..+|..+++..........+ ...++++.|++-
T Consensus 207 ~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~-------------~p~gi~~~~~~~ 263 (267)
T 1npe_A 207 G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQT-------------RLYGITIALSQC 263 (267)
T ss_dssp C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCC-------------CCCCEEEECSCC
T ss_pred C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcccccc-------------ccceeeecCccC
Confidence 2 2334566654 3444455556689999999877654332221111 347888888764
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.37 E-value=0.00054 Score=55.10 Aligned_cols=149 Identities=7% Similarity=-0.087 Sum_probs=88.1
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-CcEEEEEeCCCcEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP-QVLLVTGSSDGSVRIW 162 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~-~~~l~s~~~d~~v~iw 162 (318)
+.++++-..++.|..++...... ...+.........+++ .+. +.++++-...+.|.++
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~--------------~~~~~~~~~~p~~ia~-------d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEP--------------TTIIRQDLGSPEGIAL-------DHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCC--------------EEEECTTCCCEEEEEE-------ETTTTEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCEEEEEecCCCCc--------------EEEEECCCCCccEEEE-------EecCCeEEEEECCCCEEEEE
Confidence 35666666788999999875431 1112222245688999 664 4555555567899999
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC---CCcEEEeeeccCCCeeeEeeeee
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG---SGSFDLWKCDISCNKFDKVGSYN 239 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~~ 239 (318)
++........... .......++++ |++..|+.+.. .+.|..++++....+ .+. .
T Consensus 107 ~~~g~~~~~~~~~--------------~~~~P~~i~vd-----~~~g~lyv~~~~~~~~~I~~~~~dg~~~~--~~~--~ 163 (267)
T 1npe_A 107 KMDGTQRRVLFDT--------------GLVNPRGIVTD-----PVRGNLYWTDWNRDNPKIETSHMDGTNRR--ILA--Q 163 (267)
T ss_dssp ETTSCSCEEEECS--------------SCSSEEEEEEE-----TTTTEEEEEECCSSSCEEEEEETTSCCCE--EEE--C
T ss_pred EcCCCCEEEEEEC--------------CCCCccEEEEe-----eCCCEEEEEECCCCCcEEEEEecCCCCcE--EEE--E
Confidence 9864322111110 01245788999 85544444443 467887754432221 221 1
Q ss_pred cccCceeEEEEcCCCCEE-EEecCCCcEEEEEecCCce
Q 021036 240 AHDQVVTGLAWAFDGCCL-YSCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 240 ~h~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~ 276 (318)
........++++|++..| ++-...+.|..+|+.+...
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 223456889999987655 4555668899999876443
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.36 E-value=0.00029 Score=55.44 Aligned_cols=176 Identities=10% Similarity=-0.003 Sum_probs=106.0
Q ss_pred eEEeeCC--CceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEE
Q 021036 20 TVAASKS--KGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVS 97 (318)
Q Consensus 20 ~~t~s~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 97 (318)
..+.+.+ ..++..|+.+++.+..+.......... ++. .+ +++......++.+.
T Consensus 34 yestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeG------i~~--~~-----------------~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 34 YESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAG------IVA--WR-----------------DRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEE------EEE--ET-----------------TEEEEEESSSSEEE
T ss_pred EEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeE------EEE--eC-----------------CEEEEEEeeCCEEE
Confidence 3444444 389999999998877665432111111 222 12 24556667899999
Q ss_pred EEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccc
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHC 177 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 177 (318)
++|.++. +.+.++...... +.+++ ++..|+.+..++.|.++|..+.+....+....
T Consensus 89 v~D~~tl--------------~~~~ti~~~~~G-wglt~---------dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~ 144 (243)
T 3mbr_X 89 VYDLATL--------------TPRARFRYPGEG-WALTS---------DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA 144 (243)
T ss_dssp EEETTTT--------------EEEEEEECSSCC-CEEEE---------CSSCEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEECCcC--------------cEEEEEeCCCCc-eEEee---------CCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc
Confidence 9999984 455555432222 56666 34455555668899999999988887776543
Q ss_pred cccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec-----------ccCcee
Q 021036 178 VPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA-----------HDQVVT 246 (318)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-----------h~~~v~ 246 (318)
.+. .-..++.+.+. +|.+++..-.+..|.+. |.++++......+.+ -..-.+
T Consensus 145 ~g~---------~~~~lNeLe~~------~G~lyanvw~s~~I~vI--Dp~tG~V~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 145 GGR---------PLDNLNELEWV------NGELLANVWLTSRIARI--DPASGKVVAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp TTE---------ECCCEEEEEEE------TTEEEEEETTTTEEEEE--CTTTCBEEEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred CCc---------ccccceeeEEe------CCEEEEEECCCCeEEEE--ECCCCCEEEEEECCcCccccccccCCcCCceE
Confidence 211 01134556664 67766666567777776 787877322222221 113457
Q ss_pred EEEEcCCCCEEEEec
Q 021036 247 GLAWAFDGCCLYSCS 261 (318)
Q Consensus 247 ~~~~~~~~~~l~s~~ 261 (318)
.++++|+++.|+..+
T Consensus 208 GIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEC
Confidence 899999876554444
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.35 E-value=4.4e-05 Score=63.38 Aligned_cols=172 Identities=8% Similarity=-0.053 Sum_probs=98.8
Q ss_pred cccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC
Q 021036 76 PQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS 155 (318)
Q Consensus 76 ~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~ 155 (318)
.++...+++. |+.++.++.|..+|.+ ++. ...+......+.++.. ..++.+++. +
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~--------------~~~~~~~~~~~~~~~~-------d~~g~l~v~-t- 194 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPD-GTE--------------KWRFKTNDAITSAASI-------GKDGTIYFG-S- 194 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTT-SCE--------------EEEEECSSCCCSCCEE-------CTTCCEEEE-S-
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCC-CCE--------------eEEEecCCCceeeeEE-------cCCCEEEEE-e-
Confidence 3344444555 5557778899999988 542 2223333445566666 566665544 4
Q ss_pred CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe
Q 021036 156 DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 156 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 235 (318)
+.|..+| .+++......... ..+.++... +++. +..++.++.+..+ +.... .+
T Consensus 195 -~~l~~~d-~~g~~~~~~~~~~--------------~~~~~~~~~-----~~g~-l~v~t~~~gl~~~--~~~g~---~~ 247 (330)
T 3hxj_A 195 -DKVYAIN-PDGTEKWNFYAGY--------------WTVTRPAIS-----EDGT-IYVTSLDGHLYAI--NPDGT---EK 247 (330)
T ss_dssp -SSEEEEC-TTSCEEEEECCSS--------------CCCSCCEEC-----TTSC-EEEEETTTEEEEE--CTTSC---EE
T ss_pred -CEEEEEC-CCCcEEEEEccCC--------------cceeceEEC-----CCCe-EEEEcCCCeEEEE--CCCCC---Ee
Confidence 8899999 6666555443221 246666776 6665 4556667778887 44333 23
Q ss_pred eeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 236 GSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 236 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
..+......+..+...+++. |..++.+|.|..+|..+.......... ..+.++...++|.+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~~g~~~~~~~~~~---------------~~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 248 WRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINPDGTEKWNFETGS---------------WIIATPVIDENGTIYFG 311 (330)
T ss_dssp EEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECTTSCEEEEEECSS---------------CCCSCCEECTTCCEEEE
T ss_pred EEeeCCCCccccceEcCCCe-EEEecCCCCEEEECCCCcEEEEEEcCC---------------ccccceEEcCCCEEEEE
Confidence 33333334445566666664 666777888999986333333332221 13456666666665543
No 243
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.35 E-value=0.00036 Score=64.05 Aligned_cols=96 Identities=8% Similarity=-0.072 Sum_probs=58.2
Q ss_pred CCceEEEEEeCCC-----------cEEEeeeccCCCeeeEee--eeecccCc-eeEEEEcCCCCEEEEecCC--------
Q 021036 206 PRLMLLAVGKGSG-----------SFDLWKCDISCNKFDKVG--SYNAHDQV-VTGLAWAFDGCCLYSCSQD-------- 263 (318)
Q Consensus 206 ~~~~~l~~~~~dg-----------~i~vw~~~~~~~~~~~~~--~~~~h~~~-v~~~~~~~~~~~l~s~~~d-------- 263 (318)
.++++++.|+.++ .|.+| |..+..+..+. .+. ... -.++...|++++++.|+.+
T Consensus 409 ~~~~i~v~GG~~~~~~~~~~~~~~~v~~y--d~~~~~W~~~~~~~mp--~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~ 484 (656)
T 1k3i_A 409 VKGKILTFGGSPDYQDSDATTNAHIITLG--EPGTSPNTVFASNGLY--FARTFHTSVVLPDGSTFITGGQRRGIPFEDS 484 (656)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECC--STTSCCEEEECTTCCS--SCCBSCEEEECTTSCEEEECCBSBCCTTCCC
T ss_pred CCCeEEEEeCCCCCCCCCcCCcceEEEcC--CCCCCCeeEEccCCCC--CCcccCCeEECCCCCEEEECCcccCcCcCCC
Confidence 3678888887543 56676 66666664443 221 122 2345567899999999865
Q ss_pred ---CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 264 ---NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 264 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
..+.+||..++....+...+.. ...| ....+.|||++++.|.
T Consensus 485 ~~~~~v~~ydp~t~~W~~~~~~~~~--------R~~h----s~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 485 TPVFTPEIYVPEQDTFYKQNPNSIV--------RVYH----SISLLLPDGRVFNGGG 529 (656)
T ss_dssp SBCCCCEEEEGGGTEEEECCCCSSC--------CCTT----EEEEECTTSCEEEEEC
T ss_pred CcccceEEEcCCCCceeecCCCCCc--------cccc----cHhhcCCCcEEEecCC
Confidence 5689999988766544322211 1112 2344568998888774
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.33 E-value=0.00017 Score=59.87 Aligned_cols=150 Identities=9% Similarity=-0.036 Sum_probs=86.9
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEee-----------------eccccccEEEEEeeeecCCCCC-
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGL-----------------FQAHNSWITSISLAVLSSDSSN- 145 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~h~~~v~~~~~~p~~~~~~~- 145 (318)
+++++++..++.|..|+..+++. ..... ..........+++ .+
T Consensus 30 g~~l~v~~~~~~i~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~-------~~~ 90 (322)
T 2fp8_A 30 NKGFYTSVQDGRVIKYEGPNSGF------------VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY-------NLQ 90 (322)
T ss_dssp CSSEEEECTTSEEEEECCTTTCE------------EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE-------ETT
T ss_pred CCEEEEEcCCCeEEEECCCCCce------------EEEecccccccccccccccchhccccCCCCceEEE-------cCC
Confidence 38788888899999998876432 11110 0011235788999 65
Q ss_pred CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeC--------
Q 021036 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKG-------- 216 (318)
Q Consensus 146 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~-------- 216 (318)
++++ +.+...+.|..+|..+++.. .+..... .......+.+++. + +|.+.++...
T Consensus 91 ~g~l-~v~d~~~~i~~~d~~~g~~~-~~~~~~~---------~~~~~~p~~i~~d-----~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 91 NNQL-YIVDCYYHLSVVGSEGGHAT-QLATSVD---------GVPFKWLYAVTVD-----QRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp TTEE-EEEETTTEEEEECTTCEECE-EEESEET---------TEECSCEEEEEEC-----TTTCCEEEEESCSSCCTTCH
T ss_pred CCcE-EEEECCCCEEEEeCCCCEEE-EecccCC---------CCcccccceEEEe-----cCCCEEEEECCccccccccc
Confidence 5654 44444455888887655322 1111000 0011245678888 8 8877666432
Q ss_pred ---------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEe-cCCCcEEEEEecC
Q 021036 217 ---------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSC-SQDNFVRSWIFHG 273 (318)
Q Consensus 217 ---------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~ 273 (318)
++.|..| +..+++...+ .........++++|+|++|+.+ ..++.|..|++.+
T Consensus 155 ~~~~~~~~~~g~v~~~--d~~~~~~~~~---~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKY--DPSTKETTLL---LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHHHHHTCCCEEEEEE--ETTTTEEEEE---EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ceehcccCCCceEEEE--eCCCCEEEEe---ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 2556666 6555543222 1122345679999999855544 5678999999875
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.32 E-value=0.00013 Score=64.81 Aligned_cols=216 Identities=10% Similarity=-0.091 Sum_probs=123.0
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecch------hccccccccceee--------eeccccc--CC---CCcccccc
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQ------YASRSAMLHSLAV--------AWSPVLR--LS---SKKYPVPQ 77 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~--------~w~p~~~--~~---~~~~~v~~ 77 (318)
..-+.+|+.+|.++++=+++++.+..+..-. ++.......++.- -....++ +. .|--.+..
T Consensus 15 ~~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~ 94 (595)
T 1fwx_A 15 YYGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSF 94 (595)
T ss_dssp EEEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEE
T ss_pred EEEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCC
Confidence 3457899999999999999988776654321 1111100000000 0001111 00 01112222
Q ss_pred cCCCCCccEEEEecC-CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCC-CCCcEEEEEe-
Q 021036 78 NGSSNWFSILAVGGR-SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS-NPQVLLVTGS- 154 (318)
Q Consensus 78 ~~~s~~~~~l~~g~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~-~~~~~l~s~~- 154 (318)
.+-.++|++++.... ++.|.+.|+.+.++. +.+ .+.. ......+++ .. |+++++++++
T Consensus 95 t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~-----------~ii-~ip~-g~~phg~~~------~~~p~~~~v~~~~~ 155 (595)
T 1fwx_A 95 TEGKYDGRFLFMNDKANTRVARVRCDVMKCD-----------AIL-EIPN-AKGIHGLRP------QKWPRSNYVFCNGE 155 (595)
T ss_dssp ETTEEEEEEEEEEETTTTEEEEEETTTTEEE-----------EEE-ECSS-CCSEEEEEE------CCSSBCSEEEEEEC
T ss_pred CCCCcCCCEEEEEcCCCCEEEEEECCCceEe-----------eEE-eCCC-CCCCcceee------eecCCCcEEEEecc
Confidence 233347787777654 556999999986532 111 3322 234677776 23 7888888884
Q ss_pred -----------------CCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC
Q 021036 155 -----------------SDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS 217 (318)
Q Consensus 155 -----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d 217 (318)
.++.+.+.|..+.+....+..... ...++++ |+|+++++.+.+
T Consensus 156 ~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~---------------pd~~~~s-----pdGk~~~vt~~~ 215 (595)
T 1fwx_A 156 DETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN---------------LDNCDAD-----YEGKWAFSTSYN 215 (595)
T ss_dssp SCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC---------------CCCEEEC-----SSSSEEEEEESC
T ss_pred cccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCC---------------ccceEEC-----CCCCEEEEEecC
Confidence 345789999998877776654221 2345676 788877777744
Q ss_pred C--------------------------------------cEEEeeeccCCCeeeE-eeeeecccCceeEEEEcCCCCEEE
Q 021036 218 G--------------------------------------SFDLWKCDISCNKFDK-VGSYNAHDQVVTGLAWAFDGCCLY 258 (318)
Q Consensus 218 g--------------------------------------~i~vw~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~ 258 (318)
. .|.+. |.++.+.+. +..+.. .....++.++|||++++
T Consensus 216 se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI--D~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~ 292 (595)
T 1fwx_A 216 SEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV--DGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLC 292 (595)
T ss_dssp TTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE--ECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEE
T ss_pred cccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE--eCcccCCceeEEEEec-CCCceEEEEcCCCCEEE
Confidence 3 24444 343311012 222322 22456799999999765
Q ss_pred E-ecCCCcEEEEEecCC
Q 021036 259 S-CSQDNFVRSWIFHGN 274 (318)
Q Consensus 259 s-~~~d~~v~iwd~~~~ 274 (318)
+ +..+.+|.++|+.+.
T Consensus 293 V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EECTTSSBEEEEEGGGH
T ss_pred EeCCCCCeEEEEECccc
Confidence 5 457789999999864
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.29 E-value=3e-05 Score=65.63 Aligned_cols=68 Identities=9% Similarity=-0.183 Sum_probs=50.3
Q ss_pred cEEEEecCCC----cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe------
Q 021036 85 SILAVGGRSG----KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS------ 154 (318)
Q Consensus 85 ~~l~~g~~dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~------ 154 (318)
..+++-..++ .|.+.|..++ +.+.++..-..+ .+.+ ++++++++++.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~--------------~v~~~i~vG~~P--~i~~-------spDg~~lyVan~~~~r~ 89 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCG--------------VTLGHSLGAFLS--LAVA-------GHSGSDFALASTSFARS 89 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTT--------------EEEEEEEECTTC--EEEE-------CTTSSCEEEEEEEETTT
T ss_pred eEEEECCccCCccceEEEEECCCC--------------eEEEEEeCCCCC--ceEE-------CCCCCEEEEEccccccc
Confidence 3444444454 7889999885 455666544456 6999 89998888886
Q ss_pred ----CCCcEEEEECCCcceeeeecc
Q 021036 155 ----SDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 155 ----~d~~v~iwd~~~~~~~~~~~~ 175 (318)
.++.|.+||+.+++....+..
T Consensus 90 ~~G~~~~~VsviD~~T~~vv~~I~v 114 (368)
T 1mda_H 90 AKGKRTDYVEVFDPVTFLPIADIEL 114 (368)
T ss_dssp TSSSEEEEEEEECTTTCCEEEEEEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEEC
Confidence 368999999999998888754
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.24 E-value=0.00021 Score=65.85 Aligned_cols=166 Identities=17% Similarity=0.084 Sum_probs=94.7
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecc--ccccEEEEEeeeecCCCCCCCcEEEEEe------C
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA--HNSWITSISLAVLSSDSSNPQVLLVTGS------S 155 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~~~~~~~l~s~~------~ 155 (318)
+..|+.++.|+.|..+|.++|+. +-.+.. +......+...|. -.++. ++.++ .
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~--------------~W~~~~~~~~~~~~~~~~sP~----v~~g~-v~vg~~~~~~~~ 181 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQR--------------AWSVDTRADHKRSYTITGAPR----VVNGK-VVIGNGGAEFGV 181 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE--------------EEEEECCSCTTSCCBCCSCCE----EETTE-EEECCBCTTTCC
T ss_pred CCEEEEEccCCEEEEEECCCCCE--------------eeeecCcCCCCCCccccCCcE----EECCE-EEEEeCCCccCC
Confidence 46788899999999999999763 222221 1111111111010 01343 44443 3
Q ss_pred CCcEEEEECCCcceeeeecccc-cccccc--e------eee--------eecccceeEEEEeeccCCCCceEEEEEeCCC
Q 021036 156 DGSVRIWDGYIQELQKSAEAHC-VPFSLL--K------EVV--------TVNTVPISVLSLILPVQSPRLMLLAVGKGSG 218 (318)
Q Consensus 156 d~~v~iwd~~~~~~~~~~~~~~-~~~~~~--~------~~~--------~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg 218 (318)
++.|..||..+|+.+..+.... .+.... . ... .........++++ |+..+++.+..++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d-----~~~~~vy~~~~~g 256 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYD-----PELNLLYIGVGNG 256 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEE-----TTTTEEEEECCCE
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEc-----CCCCEEEEeCCCC
Confidence 7899999999999887764211 000000 0 000 0111122357787 7888888888776
Q ss_pred c-------------------EEEeeeccCCCeeeEeeeeec--cc-------CceeEEEEcCCCC---EEEEecCCCcEE
Q 021036 219 S-------------------FDLWKCDISCNKFDKVGSYNA--HD-------QVVTGLAWAFDGC---CLYSCSQDNFVR 267 (318)
Q Consensus 219 ~-------------------i~vw~~~~~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~~~d~~v~ 267 (318)
. |..+ |..+++ .+..++. |. .++.......+|+ .++.++.+|.++
T Consensus 257 ~~w~~~~~~~~~gd~~y~~~v~Al--D~~TG~--~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~ 332 (689)
T 1yiq_A 257 SLWDPKWRSQAKGDNLFLSSIVAV--NADTGE--YVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFY 332 (689)
T ss_dssp ESSCHHHHHTTCSCCTTTTEEEEE--ETTTCC--EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEE
T ss_pred CccccCCCCCCCCCceeeeeEEEE--EccCCc--eeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEE
Confidence 3 7776 777777 4444432 22 1122222223564 788999999999
Q ss_pred EEEecCCcee
Q 021036 268 SWIFHGNSLS 277 (318)
Q Consensus 268 iwd~~~~~~~ 277 (318)
++|..++++.
T Consensus 333 ~lD~~tG~~l 342 (689)
T 1yiq_A 333 VIDRATGELL 342 (689)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCCEe
Confidence 9999988765
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.23 E-value=0.00014 Score=61.82 Aligned_cols=135 Identities=9% Similarity=-0.058 Sum_probs=85.1
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEEC
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDG 164 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~ 164 (318)
..++.++.++.+..+|.++++. +.... ......+.. .+..++.++.++.|..+|.
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~~--------------~w~~~--~~~~~~~~~---------~~~~l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQI--------------MWKRE--LGSVNDFIV---------DGNRIYLVDQNDRVMALTI 294 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCCE--------------EEEEC--CCCEEEEEE---------ETTEEEEEETTCCEEEEET
T ss_pred CEEEEEecCcEEEEEECCCCcE--------------Eeecc--CCCCCCceE---------ECCEEEEEcCCCeEEEEEC
Confidence 6777788899999999988652 22222 223344444 3456788888999999999
Q ss_pred CCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCc
Q 021036 165 YIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQV 244 (318)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~ 244 (318)
.+++.......... ..+...... +..+++++.+|.++.+ |..+++ .+.........
T Consensus 295 ~tG~~~w~~~~~~~-------------~~~~~~~~~-------~~~l~v~~~~g~l~~~--d~~tG~--~~~~~~~~~~~ 350 (376)
T 3q7m_A 295 DGGVTLWTQSDLLH-------------RLLTSPVLY-------NGNLVVGDSEGYLHWI--NVEDGR--FVAQQKVDSSG 350 (376)
T ss_dssp TTCCEEEEECTTTT-------------SCCCCCEEE-------TTEEEEECTTSEEEEE--ETTTCC--EEEEEECCTTC
T ss_pred CCCcEEEeecccCC-------------CcccCCEEE-------CCEEEEEeCCCeEEEE--ECCCCc--EEEEEecCCCc
Confidence 99987765541111 012222222 4567888889999998 666776 34444332233
Q ss_pred eeE-EEEcCCCCEEEEecCCCcEEEEE
Q 021036 245 VTG-LAWAFDGCCLYSCSQDNFVRSWI 270 (318)
Q Consensus 245 v~~-~~~~~~~~~l~s~~~d~~v~iwd 270 (318)
+.. ... .+..|+.++.+|.|..|+
T Consensus 351 ~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 351 FQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp BCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 322 222 245788888999999886
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.21 E-value=3.1e-05 Score=64.31 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=59.9
Q ss_pred CcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeec
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCD 226 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 226 (318)
+..|..++.++.|..+|.. ++......... ..+..+... +++. ++.++.++.|..| +
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~--------------~~~~~~~~~-----~~g~-l~vgt~~~~l~~~--d 163 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKK--------------AIYATPIVS-----EDGT-IYVGSNDNYLYAI--N 163 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSS--------------CCCSCCEEC-----TTSC-EEEECTTSEEEEE--C
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCC--------------ceeeeeEEc-----CCCE-EEEEcCCCEEEEE--C
Confidence 3457778888899999987 66555443221 123444554 5565 5556777888888 4
Q ss_pred cCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCC
Q 021036 227 ISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGN 274 (318)
Q Consensus 227 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 274 (318)
.. ++ ....+......+.++...+++.+++.. +.|..+| .++
T Consensus 164 ~~-g~--~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g 204 (330)
T 3hxj_A 164 PD-GT--EKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDG 204 (330)
T ss_dssp TT-SC--EEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTS
T ss_pred CC-CC--EeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCC
Confidence 44 43 233333344556777777777755443 7788888 443
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=0.00038 Score=64.02 Aligned_cols=163 Identities=15% Similarity=0.052 Sum_probs=96.0
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccc-c----ccEEEEEeeeecCCCCCCCcEEEEEeC---
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH-N----SWITSISLAVLSSDSSNPQVLLVTGSS--- 155 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~----~~v~~~~~~p~~~~~~~~~~~l~s~~~--- 155 (318)
+..|+.++.|+.|..+|.++++. +-.+... . ..+.+ .|. ..++ .++.++.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~--------------~W~~~~~~~~~~~~~~~~---~p~----v~~~-~v~v~~~~~~ 185 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKE--------------VWHQNTFEGQKGSLTITG---APR----VFKG-KVIIGNGGAE 185 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE--------------EEEEETTTTCCSSCBCCS---CCE----EETT-EEEECCBCTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCE--------------EeeecCCcCcCcCccccc---CcE----EECC-EEEEEecccc
Confidence 46888889999999999998763 2333222 1 11111 000 1133 4555543
Q ss_pred ---CCcEEEEECCCcceeeeeccccccc-ccc---------------eeee--eecccceeEEEEeeccCCCCceEEEEE
Q 021036 156 ---DGSVRIWDGYIQELQKSAEAHCVPF-SLL---------------KEVV--TVNTVPISVLSLILPVQSPRLMLLAVG 214 (318)
Q Consensus 156 ---d~~v~iwd~~~~~~~~~~~~~~~~~-~~~---------------~~~~--~~~~~~v~~l~~~~~~~~~~~~~l~~~ 214 (318)
++.|+.+|..+|+.+..+....... ... .... .........++++ +++.+++.+
T Consensus 186 ~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d-----~~~~~vy~~ 260 (677)
T 1kb0_A 186 YGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFD-----AELNTMYVG 260 (677)
T ss_dssp TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEE-----TTTTEEEEE
T ss_pred cCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEc-----CCCCEEEEE
Confidence 7999999999999888765432210 000 0000 0111222456787 788888888
Q ss_pred eCCC-------------------cEEEeeeccCCCeeeEeeeeec--cc-------CceeEEEEcCCC---CEEEEecCC
Q 021036 215 KGSG-------------------SFDLWKCDISCNKFDKVGSYNA--HD-------QVVTGLAWAFDG---CCLYSCSQD 263 (318)
Q Consensus 215 ~~dg-------------------~i~vw~~~~~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~---~~l~s~~~d 263 (318)
..++ .|..+ |..+++ .+..++. |. ....-+....+| ..++.++.+
T Consensus 261 ~~~~~~w~~~~~~~~~gd~~~~~sv~Al--D~~TG~--~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~ 336 (677)
T 1kb0_A 261 TGNGSPWSHKVRSPKGGDNLYLASIVAL--DPDTGK--YKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKN 336 (677)
T ss_dssp CCCEESSCHHHHSTTCCCCTTTTEEEEE--CTTTCC--EEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTT
T ss_pred CCCCccccCCCCCccCCCCeeeEEEEEE--ECCCCC--EEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCC
Confidence 7664 36666 777777 3333332 31 112223333467 678999999
Q ss_pred CcEEEEEecCCcee
Q 021036 264 NFVRSWIFHGNSLS 277 (318)
Q Consensus 264 ~~v~iwd~~~~~~~ 277 (318)
|.++++|..++++.
T Consensus 337 G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 337 GFFFVLDRTNGKFI 350 (677)
T ss_dssp SEEEEEETTTCCEE
T ss_pred CEEEEEECCCCCEe
Confidence 99999999988764
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.20 E-value=0.00096 Score=55.29 Aligned_cols=116 Identities=14% Similarity=0.070 Sum_probs=70.0
Q ss_pred cEEEEEeeeecCCCCC-CCcEEEEEeC-----------------CCcEEEEECCCcceeeeecccccccccceeeeeecc
Q 021036 130 WITSISLAVLSSDSSN-PQVLLVTGSS-----------------DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNT 191 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~-~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (318)
..+.+++ .+ +|+++++-.. ++.|..+|..+++....... .
T Consensus 127 ~p~~i~~-------d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~---------------~ 184 (322)
T 2fp8_A 127 WLYAVTV-------DQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE---------------L 184 (322)
T ss_dssp CEEEEEE-------CTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE---------------E
T ss_pred ccceEEE-------ecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC---------------C
Confidence 4678888 77 7877766432 36688888765543221111 1
Q ss_pred cceeEEEEeeccCCCCceEEEEE-eCCCcEEEeeeccCC-CeeeEeeeeecccCceeEEEEcCCCCEEEEecC-------
Q 021036 192 VPISVLSLILPVQSPRLMLLAVG-KGSGSFDLWKCDISC-NKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ------- 262 (318)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------- 262 (318)
...+.++++ ++++.|+.+ ..++.|.+|+++... +..+.... ..+ ...++++++|.+.++...
T Consensus 185 ~~p~gia~~-----~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 185 HVPGGAEVS-----ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMH 255 (322)
T ss_dssp SCCCEEEEC-----TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTT
T ss_pred ccCcceEEC-----CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecCccccccc
Confidence 134678998 898866555 556889998554211 22222222 223 678999999986666544
Q ss_pred ---CCcEEEEEecCCce
Q 021036 263 ---DNFVRSWIFHGNSL 276 (318)
Q Consensus 263 ---d~~v~iwd~~~~~~ 276 (318)
.+.|..+|......
T Consensus 256 ~~~~~~v~~~d~~G~~~ 272 (322)
T 2fp8_A 256 GRVDPKGIKFDEFGNIL 272 (322)
T ss_dssp SCEEEEEEEECTTSCEE
T ss_pred CCCccEEEEECCCCCEE
Confidence 46688887654333
No 252
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.14 E-value=0.0019 Score=53.48 Aligned_cols=194 Identities=10% Similarity=-0.029 Sum_probs=110.1
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVS 97 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 97 (318)
.|.+.-+....|+..++........+..... . ....+.|++.. +.++.+-...+.|.
T Consensus 4 ~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~---~---~~~~ld~d~~~-----------------~~lyw~D~~~~~I~ 60 (318)
T 3sov_A 4 APLLLYANRRDLRLVDATNGKENATIVVGGL---E---DAAAVDFVFSH-----------------GLIYWSDVSEEAIK 60 (318)
T ss_dssp CCEEEEECEEEEEEEETTCTTSCCEEEEEEE---E---EEEEEEEEGGG-----------------TEEEEEETTTTEEE
T ss_pred ccEEEEEccCeEEEEECCCCceEEEEEecCC---C---ccEEEEEEeCC-----------------CEEEEEECCCCcEE
Confidence 3455556678899999987642222222111 1 13348899876 35666667778899
Q ss_pred EEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
.++.+.+... . ..+.........+++ .. .+.++++-...+.|.++++........+..
T Consensus 61 r~~~~g~~~~-----------~--~~~~~~l~~p~glav-------d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~- 119 (318)
T 3sov_A 61 RTEFNKTESV-----------Q--NVVVSGLLSPDGLAC-------DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ- 119 (318)
T ss_dssp EEETTSSSCC-----------C--EEEEECCSCCCEEEE-------ETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-
T ss_pred EEEccCCCce-----------E--EEEcCCCCCccEEEE-------EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC-
Confidence 8988764210 0 111111234556777 43 555666666678899999875432221111
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe--CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCC
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK--GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG 254 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 254 (318)
.......++++ |.+..|+.+. ..+.|...+.+ ......+ ....-.....++++|++
T Consensus 120 -------------~~~~P~giavd-----p~~g~ly~td~~~~~~I~r~~~d--G~~~~~~--~~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 120 -------------ELDQPRAIALD-----PSSGFMYWTDWGEVPKIERAGMD--GSSRFII--INSEIYWPNGLTLDYEE 177 (318)
T ss_dssp -------------SCSSEEEEEEE-----GGGTEEEEEECSSSCEEEEEETT--SCSCEEE--ECSSCSCEEEEEEETTT
T ss_pred -------------CCCCccEEEEe-----CCCCEEEEEecCCCCEEEEEEcC--CCCeEEE--EECCCCCccEEEEeccC
Confidence 11245788998 6655555544 25677776443 3221121 11222356889999976
Q ss_pred CEEE-EecCCCcEEEEEecCCcee
Q 021036 255 CCLY-SCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 255 ~~l~-s~~~d~~v~iwd~~~~~~~ 277 (318)
..|. +-+..+.|..+|+.+....
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG~~~~ 201 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDGTNRQ 201 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCE
T ss_pred CEEEEEECCCCEEEEEcCCCCceE
Confidence 6554 4456678999998764443
No 253
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.09 E-value=0.00052 Score=58.17 Aligned_cols=146 Identities=9% Similarity=0.041 Sum_probs=87.9
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecccc-------ccEEEEEeeeecCCCCCCCcEEEEEeCC
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN-------SWITSISLAVLSSDSSNPQVLLVTGSSD 156 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~p~~~~~~~~~~~l~s~~~d 156 (318)
+..++.+..+|.|..+|..+++.. ....... ..+..+.-.|. ..+..++.++.+
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~--------------w~~~~~~~~~~~~~~~~~~~~~~p~-----~~~~~v~~~~~~ 248 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMI--------------WQQRISQATGSTEIDRLSDVDTTPV-----VVNGVVFALAYN 248 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEE--------------EEEECCC-----------CCCCCCE-----EETTEEEEECTT
T ss_pred CCEEEEEcCCCEEEEEECCCCcEE--------------EEEecccCCCCcccccccccCCCcE-----EECCEEEEEecC
Confidence 457788888999999999887532 1211110 00000111010 123567778889
Q ss_pred CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG 236 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 236 (318)
+.+..+|..+++........ ....+.. ++..++.++.++.+..+ |..+++ .+.
T Consensus 249 g~l~~~d~~tG~~~w~~~~~----------------~~~~~~~-------~~~~l~~~~~~g~l~~~--d~~tG~--~~w 301 (376)
T 3q7m_A 249 GNLTALDLRSGQIMWKRELG----------------SVNDFIV-------DGNRIYLVDQNDRVMAL--TIDGGV--TLW 301 (376)
T ss_dssp SCEEEEETTTCCEEEEECCC----------------CEEEEEE-------ETTEEEEEETTCCEEEE--ETTTCC--EEE
T ss_pred cEEEEEECCCCcEEeeccCC----------------CCCCceE-------ECCEEEEEcCCCeEEEE--ECCCCc--EEE
Confidence 99999999999877654421 1223333 34567777788999998 666766 333
Q ss_pred eeec-ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 237 SYNA-HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 237 ~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
.... ....+..... .+..|+.++.+|.|..+|..+++..
T Consensus 302 ~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 302 TQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp EECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred eecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 3331 1122222222 2567888889999999999887764
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.06 E-value=0.00084 Score=61.67 Aligned_cols=56 Identities=13% Similarity=0.108 Sum_probs=38.3
Q ss_pred CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 217 SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 217 dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
+|.|..| |..+++ .+.+... ..+.....+...+.+++.++.|+.++.||.++++..
T Consensus 437 ~g~l~A~--D~~tG~--~~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 437 SGALLAW--DPVKQK--AAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEE--ETTTTE--EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEE--eCCCCc--EEEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 3678888 667776 3434332 223333445556778889999999999999987765
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.05 E-value=0.0039 Score=52.32 Aligned_cols=189 Identities=8% Similarity=-0.007 Sum_probs=104.2
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSL 98 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 98 (318)
+.+.-+....|+..++........+. .. .....++|++.. +.++++-...+.|..
T Consensus 45 ~~ll~~~~~~I~~i~~~g~~~~~~~~--~~------~~~~~l~~d~~~-----------------~~ly~~D~~~~~I~r 99 (349)
T 3v64_C 45 PVLLFANRIDIRQVLPHRSEYTLLLN--NL------ENAIALDFHHRR-----------------ELVFWSDVTLDRILR 99 (349)
T ss_dssp CEEEEECBSCEEEECTTSCCEEEEEC--SC------SCEEEEEEETTT-----------------TEEEEEETTTTEEEE
T ss_pred ceeEeecccceEEEeCCCCeeEEeec--CC------CceEEEEEeccc-----------------cEEEEEeccCCceEE
Confidence 33444455567766665443221111 10 112347787665 356666667788988
Q ss_pred EEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeecccc
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHC 177 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 177 (318)
++.+.... + ..+.........+++ .+ .+.++++-...+.|.+.++........+...
T Consensus 100 ~~~~g~~~------------~--~~~~~~~~~p~glav-------d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~- 157 (349)
T 3v64_C 100 ANLNGSNV------------E--EVVSTGLESPGGLAV-------DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS- 157 (349)
T ss_dssp EETTSCSC------------E--EEECSSCSCCCEEEE-------ETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT-
T ss_pred EecCCCCc------------e--EEEeCCCCCccEEEE-------ecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC-
Confidence 98876431 1 111212233466777 44 5556666666788999998754322211111
Q ss_pred cccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCC-CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC
Q 021036 178 VPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGS-GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC 255 (318)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~d-g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 255 (318)
......++++ |. +.++.+-..+ +.|..++++ ......+ ....-.....++++|++.
T Consensus 158 -------------l~~P~~iavd-----p~~g~ly~td~~~~~~I~r~~~d--G~~~~~~--~~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 158 -------------LEKPRAIALH-----PMEGTIYWTDWGNTPRIEASSMD--GSGRRII--ADTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp -------------CSCEEEEEEE-----TTTTEEEEEECSSSCEEEEEETT--SCSCEES--CCSSCSCEEEEEEETTTT
T ss_pred -------------CCCcceEEEe-----cCcCeEEEeccCCCCEEEEEeCC--CCCcEEE--EECCCCCcceEEEeCCCC
Confidence 1245788998 64 5555555444 677777443 3221121 112234568899998766
Q ss_pred EEE-EecCCCcEEEEEecCCce
Q 021036 256 CLY-SCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 256 ~l~-s~~~d~~v~iwd~~~~~~ 276 (318)
.|. +-...+.|..+|+.+...
T Consensus 216 ~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 216 RMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEEECCCCEEEEEeCCCCce
Confidence 554 445567899999876443
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.02 E-value=0.004 Score=51.14 Aligned_cols=193 Identities=10% Similarity=-0.033 Sum_probs=98.4
Q ss_pred cccCCCCCccEEEEecCCC--cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 76 PQNGSSNWFSILAVGGRSG--KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 76 ~~~~~s~~~~~l~~g~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
..++++++++++++..... .|..++..+++. ..+..+. .......++. .+++..+++-
T Consensus 75 ~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~------------~~~~~~~-~~~~~~g~~~-------~~~~~~~v~d 134 (306)
T 2p4o_A 75 SGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV------------ETLLTLP-DAIFLNGITP-------LSDTQYLTAD 134 (306)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEEEEECTTSCE------------EEEEECT-TCSCEEEEEE-------SSSSEEEEEE
T ss_pred eeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE------------EEEEeCC-CccccCcccc-------cCCCcEEEEE
Confidence 3445555558766654332 355566666542 1222221 1222345554 3455555555
Q ss_pred eCCCcEEEEECCCcce-eeeecccccccccceeeeeecccceeEEEEeeccCCCCceEE-EEEeCCCcEEEeeeccCCCe
Q 021036 154 SSDGSVRIWDGYIQEL-QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLL-AVGKGSGSFDLWKCDISCNK 231 (318)
Q Consensus 154 ~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l-~~~~~dg~i~vw~~~~~~~~ 231 (318)
..++.|..+|...++. +............. ......+.+ + ++++.| ++-...+.|..|+++.. ++
T Consensus 135 ~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~-----~~~~~pngi--s-----~dg~~lyv~d~~~~~I~~~~~~~~-g~ 201 (306)
T 2p4o_A 135 SYRGAIWLIDVVQPSGSIWLEHPMLARSNSE-----SVFPAANGL--K-----RFGNFLYVSNTEKMLLLRIPVDST-DK 201 (306)
T ss_dssp TTTTEEEEEETTTTEEEEEEECGGGSCSSTT-----CCSCSEEEE--E-----EETTEEEEEETTTTEEEEEEBCTT-SC
T ss_pred CCCCeEEEEeCCCCcEeEEEECCcccccccc-----CCCCcCCCc--C-----cCCCEEEEEeCCCCEEEEEEeCCC-CC
Confidence 5688999999765421 11111000000000 001123344 5 666554 44456788999966532 22
Q ss_pred eeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeee-cCCCCCCccccccCCCcceeeeEEEEc---
Q 021036 232 FDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVS-IPTNTPGLQSCTDLPDAFVSCLGMAVS--- 307 (318)
Q Consensus 232 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~s--- 307 (318)
......+. .......++++++|+++++....+.|.++|.. +....+. ..... ....+++|.
T Consensus 202 ~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~-------------~~p~~~a~~g~~ 266 (306)
T 2p4o_A 202 PGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV-------------IGSTAVAFGQTE 266 (306)
T ss_dssp BCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC-------------TTEEEEEECCST
T ss_pred CCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccccc-------------CCceEEEEeccc
Confidence 11111121 11345778999999887777778899999875 3332221 11111 146899998
Q ss_pred CCCcEEEEE
Q 021036 308 PGNLVVAMV 316 (318)
Q Consensus 308 p~~~~l~~~ 316 (318)
||+..|..+
T Consensus 267 ~d~~~LyVt 275 (306)
T 2p4o_A 267 GDCTAIYVV 275 (306)
T ss_dssp TTTTEEEEE
T ss_pred CCCCEEEEE
Confidence 887665543
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.01 E-value=0.0035 Score=53.41 Aligned_cols=189 Identities=8% Similarity=-0.009 Sum_probs=103.6
Q ss_pred ceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEE
Q 021036 19 PTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSL 98 (318)
Q Consensus 19 ~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i 98 (318)
+.+.-+....|+..++........+. ... ....++|++.. +.++++-...+.|..
T Consensus 88 ~~l~~~~~~~I~~i~~~~~~~~~~~~--~~~------~~~gl~~d~~~-----------------~~ly~~D~~~~~I~r 142 (386)
T 3v65_B 88 PVLLFANRIDIRQVLPHRSEYTLLLN--NLE------NAIALDFHHRR-----------------ELVFWSDVTLDRILR 142 (386)
T ss_dssp CEEEEECBSCEEEECTTSCCCEEEEC--SCS------CEEEEEEETTT-----------------TEEEEEETTTTEEEE
T ss_pred ceeEeecCccceeeccCCCcEEEEec--CCC------ccEEEEEecCC-----------------CeEEEEeCCCCcEEE
Confidence 34445555677777776554322221 111 12347888765 356666667788998
Q ss_pred EEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeecccc
Q 021036 99 WRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHC 177 (318)
Q Consensus 99 w~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 177 (318)
++.+... ....+.........+++ .+ .+.++++-...+.|.+.++........+..
T Consensus 143 ~~~~g~~--------------~~~~~~~~~~~p~glav-------d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~-- 199 (386)
T 3v65_B 143 ANLNGSN--------------VEEVVSTGLESPGGLAV-------DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ-- 199 (386)
T ss_dssp EETTSCC--------------EEEEECSSCSCCCCEEE-------ETTTTEEEEEETTTTEEEECBTTSCSCEEEECS--
T ss_pred EecCCCC--------------cEEEEeCCCCCccEEEE-------EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC--
Confidence 9887643 11112212223456677 43 455556666677888888764332221111
Q ss_pred cccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCC-CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCC
Q 021036 178 VPFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGS-GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGC 255 (318)
Q Consensus 178 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~d-g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 255 (318)
.......++++ |.+. ++++-... +.|..++. .......+ ....-.....|+++|++.
T Consensus 200 ------------~l~~P~giavd-----p~~g~ly~td~~~~~~I~r~~~--dG~~~~~~--~~~~~~~PnGlavd~~~~ 258 (386)
T 3v65_B 200 ------------SLEKPRAIALH-----PMEGTIYWTDWGNTPRIEASSM--DGSGRRII--ADTHLFWPNGLTIDYAGR 258 (386)
T ss_dssp ------------SCSCEEEEEEE-----TTTTEEEEEECSSSCEEEEEET--TSCSCEEE--ECSSCSCEEEEEEEGGGT
T ss_pred ------------CCCCCcEEEEE-----cCCCeEEEeccCCCCEEEEEeC--CCCCcEEE--EECCCCCeeeEEEeCCCC
Confidence 11245788998 6554 44444444 66777644 33221121 112234568899998766
Q ss_pred EEE-EecCCCcEEEEEecCCce
Q 021036 256 CLY-SCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 256 ~l~-s~~~d~~v~iwd~~~~~~ 276 (318)
.|. +-+..+.|..+|+.+...
T Consensus 259 ~lY~aD~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 259 RMYWVDAKHHVIERANLDGSHR 280 (386)
T ss_dssp EEEEEETTTTEEEEECTTSCSC
T ss_pred EEEEEECCCCEEEEEeCCCCee
Confidence 554 445667899998876443
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.95 E-value=0.0089 Score=56.08 Aligned_cols=191 Identities=9% Similarity=0.011 Sum_probs=111.2
Q ss_pred ccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeee------ccccccEEEEEeeeecCCCCCCCc
Q 021036 75 VPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF------QAHNSWITSISLAVLSSDSSNPQV 148 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~p~~~~~~~~~~ 148 (318)
|.++..+++|++. .|+.++-|..|+..++... ....- .-....|.++.. ..+++
T Consensus 359 V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~v~~i~~-------d~~g~ 418 (795)
T 4a2l_A 359 VSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFT------------SYTLQEDESARGIGSNNIKAVYV-------DEKKS 418 (795)
T ss_dssp EEEEEECTTSCEE-EEESSSCEEEECTTTCCEE------------EECCC------CCSCSCEEEEEE-------ETTTT
T ss_pred eEEEEECCCCCEE-EEECCCCeEEEcCCCCcEE------------EEecCCCCcccCCCCccEEEEEE-------cCCCC
Confidence 5555555555654 4667766888998765421 11100 012357899988 67787
Q ss_pred EEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccC
Q 021036 149 LLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDIS 228 (318)
Q Consensus 149 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~ 228 (318)
+|..|+.++-|..+|..+++......... ......|.++... ++|.+.+.. .+ -+.+| +..
T Consensus 419 ~lWigt~~~Gl~~~d~~~~~~~~~~~~~~----------~l~~~~v~~i~~d-----~~g~lwigt-~~-Gl~~~--~~~ 479 (795)
T 4a2l_A 419 LVYIGTHAGGLSILHRNSGQVENFNQRNS----------QLVNENVYAILPD-----GEGNLWLGT-LS-ALVRF--NPE 479 (795)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEECTTTS----------CCSCSCEEEEEEC-----SSSCEEEEE-SS-CEEEE--ETT
T ss_pred EEEEEeCcCceeEEeCCCCcEEEeecCCC----------CcCCCeeEEEEEC-----CCCCEEEEe-cC-ceeEE--eCC
Confidence 56677877889999988765433211100 0123367888877 677655544 44 47777 566
Q ss_pred CCeeeEeeee----ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEE
Q 021036 229 CNKFDKVGSY----NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGM 304 (318)
Q Consensus 229 ~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 304 (318)
++++...... .-....|.++..+++|.+.+... +-|..||..++.. .+....... .-....|.++
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~--------~l~~~~i~~i 548 (795)
T 4a2l_A 480 QRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVS--------NVTKLFTNCI 548 (795)
T ss_dssp TTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSC--------GGGGSCEEEE
T ss_pred CCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCC--------CCCCCeeEEE
Confidence 6654333211 11235788999999988655443 4588899887665 322110000 0122467888
Q ss_pred EEcCCCcEEEE
Q 021036 305 AVSPGNLVVAM 315 (318)
Q Consensus 305 ~~sp~~~~l~~ 315 (318)
..+++|.+.+.
T Consensus 549 ~~d~~g~lWig 559 (795)
T 4a2l_A 549 YEASNGIIWVG 559 (795)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEE
Confidence 88888875443
No 259
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.94 E-value=0.0072 Score=51.74 Aligned_cols=198 Identities=10% Similarity=-0.021 Sum_probs=110.0
Q ss_pred ccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcE
Q 021036 17 THPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKV 96 (318)
Q Consensus 17 ~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i 96 (318)
..+.+.-+....|+..++........+. . ......++|++.. +.++++-...+.|
T Consensus 82 ~~~~ll~~~~~~I~~i~l~~~~~~~~~~--~------~~~~~~l~~d~~~-----------------~~lywsD~~~~~I 136 (400)
T 3p5b_L 82 SIAYLFFTNRHEVRKMTLDRSEYTSLIP--N------LRNVVALDTEVAS-----------------NRIYWSDLSQRMI 136 (400)
T ss_dssp TSCEEEEEETTEEEEECTTSCSCEEEEC--S------CSCEEEEEEETTT-----------------TEEEEEETTTTEE
T ss_pred ccceeEEeccceeEEEccCCcceeEecc--c------cCcceEEeeeecc-----------------CceEEEecCCCeE
Confidence 4455666666788888887654322221 1 1112347887765 3555666667888
Q ss_pred EEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 97 SLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 97 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
+.+++...... ......+.........+++ .. .+.++++-...+.|.+.++........+..
T Consensus 137 ~~~~~~g~~~~----------~~~~~~~~~~~~~p~glav-------D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~ 199 (400)
T 3p5b_L 137 CSTQLDRAHGV----------SSYDTVISRDIQAPDGLAV-------DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE 199 (400)
T ss_dssp EEEEC----------------CCCEEEECSSCSCEEEEEE-------ETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC
T ss_pred EEEEcccCCCC----------CcceEEEeCCCCCcccEEE-------EecCCceEEEECCCCeEEEEeCCCCceEEEEeC
Confidence 88888642100 0011122223345677888 44 555666666678899988875433222211
Q ss_pred cccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-C-CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCC
Q 021036 176 HCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-G-SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFD 253 (318)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~-dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 253 (318)
.......|+++ |.+..|+... . .+.|...+++ ......+ ....-.....|+++++
T Consensus 200 --------------~~~~P~~iavd-----p~~g~ly~td~~~~~~I~~~~~d--G~~~~~~--~~~~l~~P~glavd~~ 256 (400)
T 3p5b_L 200 --------------NGSKPRAIVVD-----PVHGFMYWTDWGTPAKIKKGGLN--GVDIYSL--VTENIQWPNGITLDLL 256 (400)
T ss_dssp --------------SSCCEEEEEEE-----TTTTEEEEEECSSSCCEEEEETT--SCSCEEE--ECSSCSCEEEEEEETT
T ss_pred --------------CCCCcceEEEe-----cccCeEEEEeCCCCCEEEEEeCC--CCccEEE--EECCCCceEEEEEEeC
Confidence 11246789998 6544444444 2 3677777443 3221121 1222346789999987
Q ss_pred CCEEEEe-cCCCcEEEEEecCCceeee
Q 021036 254 GCCLYSC-SQDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 254 ~~~l~s~-~~d~~v~iwd~~~~~~~~~ 279 (318)
+..|+.+ ...+.|..+|+.+.....+
T Consensus 257 ~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 257 SGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp TTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred CCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 7666555 4567899999876554443
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.93 E-value=0.0058 Score=56.95 Aligned_cols=177 Identities=10% Similarity=0.069 Sum_probs=92.4
Q ss_pred ceeEeecCCC-CCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCC-----CcEEEEEc
Q 021036 28 GNSITKIPSN-CCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRS-----GKVSLWRI 101 (318)
Q Consensus 28 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~d-----g~i~iw~~ 101 (318)
+++++|+.++ +.+... . ... ...+.|+|++ +.|+....| ..|.++++
T Consensus 202 ~l~v~dl~~g~~~l~~~-~-----~~~---~~~~~WspDg------------------~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADK-V-----SGT---NGEIVWGPDH------------------TSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEETTCTTCCCCCC-E-----EEE---CSCCEECSST------------------TEEEEEEECTTCCEEEEEEEET
T ss_pred EEEEEECCCCCEeCCcc-c-----cCc---eeeEEEecCC------------------CEEEEEEECCCCCCCEEEEEEC
Confidence 4888899888 532210 0 111 1237888887 666655544 25777777
Q ss_pred cCCccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCCCCCcEEEEEeC---CCcEEEEECCCcc-ee--eeec
Q 021036 102 CVPKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSSNPQVLLVTGSS---DGSVRIWDGYIQE-LQ--KSAE 174 (318)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~-~~--~~~~ 174 (318)
.+++. +....+. ........+.| +++|++|+..+. ...|.++|+.++. .. ..+.
T Consensus 255 gt~~~------------~~~lv~~~~~~~~~~~~~~-------SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~ 315 (751)
T 2xe4_A 255 GKLQS------------EDVCLYEEHNPLFSAFMYK-------AADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR 315 (751)
T ss_dssp TSCGG------------GCEEEEECCCTTCEEEEEE-------CTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS
T ss_pred CCCch------------hcEEEEecCCCceEEEEEE-------CCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee
Confidence 66431 1111222 22334667899 899998876653 3468888887652 11 2221
Q ss_pred ccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC--CcEEEeeeccCC-CeeeEeeeeecccC--ceeEEE
Q 021036 175 AHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS--GSFDLWKCDISC-NKFDKVGSYNAHDQ--VVTGLA 249 (318)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d--g~i~vw~~~~~~-~~~~~~~~~~~h~~--~v~~~~ 249 (318)
.. .......+.|+ .++.+++....+ +..+||.++..+ ..++.+ +..+.. .+..+.
T Consensus 316 ~~-------------~~~~~~s~~~~-----~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~ 375 (751)
T 2xe4_A 316 PR-------------EKGVRYDVQMH-----GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIA 375 (751)
T ss_dssp CC-------------CTTCCEEEEEE-----TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEE
T ss_pred cC-------------CCCceEEEeee-----eCCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEE
Confidence 11 12234445554 455555665554 455666556554 232220 222333 344555
Q ss_pred EcCCCCEEEEecCCCc--EEEEEe
Q 021036 250 WAFDGCCLYSCSQDNF--VRSWIF 271 (318)
Q Consensus 250 ~~~~~~~l~s~~~d~~--v~iwd~ 271 (318)
+. .+.++++...++. |.++++
T Consensus 376 ~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 376 VR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EE-CCEEEEEEEeCCEEEEEEEec
Confidence 54 2335566677776 445554
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.93 E-value=0.0027 Score=57.15 Aligned_cols=56 Identities=11% Similarity=0.092 Sum_probs=35.3
Q ss_pred CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 217 SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 217 dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
+|.|..| |..+++ .+.++.. ...+........+..++.++.|+.|+.||.++++..
T Consensus 443 ~g~l~a~--D~~tG~--~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 443 MGQIRAF--DLTTGK--AKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEE--CTTTCC--EEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCeEEEE--ECCCCC--EEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 4667777 666666 3334332 222333223334567777999999999999987765
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=0.00081 Score=61.69 Aligned_cols=118 Identities=11% Similarity=0.109 Sum_probs=68.6
Q ss_pred cCCCC-CccEEEEecCCC-----------cEEEEEccCCccccccccccCCceeEEeeec-cccccEEEEEeeeecCCCC
Q 021036 78 NGSSN-WFSILAVGGRSG-----------KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-AHNSWITSISLAVLSSDSS 144 (318)
Q Consensus 78 ~~~s~-~~~~l~~g~~dg-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~ 144 (318)
.++.+ ++++++.|+.+. .+.+||..+++.. .+..+. .+.....++++ .
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~------------~~~~~~~~~~~~~~~~~~-------~ 251 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS------------DRTVTVTKHDMFCPGISM-------D 251 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC------------CCEEEECSCCCSSCEEEE-------C
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEE------------eCcccCCCCCCccccccC-------C
Confidence 34444 678888887543 5788998886632 222221 22333445666 6
Q ss_pred CCCcEEEEEeC-CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-CC-----
Q 021036 145 NPQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GS----- 217 (318)
Q Consensus 145 ~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~d----- 217 (318)
.++++++.|+. +..+.+||..+.+-...-..... ..-..++.. +++++++.|+ .+
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~-------------R~~~s~~~~-----~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-------------RGYQSSATM-----SDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-------------CSSCEEEEC-----TTSCEEEECCCCCSSSCC
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc-------------ccccceEEe-----cCCeEEEEeCcccCCccc
Confidence 78899999984 46899999887643322111110 011233443 6788888887 34
Q ss_pred CcEEEeeeccCCCeeeE
Q 021036 218 GSFDLWKCDISCNKFDK 234 (318)
Q Consensus 218 g~i~vw~~~~~~~~~~~ 234 (318)
..+.+| |..+.++..
T Consensus 314 ~~~e~y--d~~t~~W~~ 328 (656)
T 1k3i_A 314 KNGEVY--SPSSKTWTS 328 (656)
T ss_dssp CCEEEE--ETTTTEEEE
T ss_pred ccceEe--CCCCCccee
Confidence 457777 555555544
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.90 E-value=0.0052 Score=50.43 Aligned_cols=144 Identities=10% Similarity=-0.014 Sum_probs=79.5
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC--cEEEE
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG--SVRIW 162 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~--~v~iw 162 (318)
+++++-..++.|..|+.+.. ....+. .......+++ .++++++++..... .|..+
T Consensus 44 ~lyv~d~~~~~I~~~d~~g~---------------~~~~~~-~~~~p~gia~-------~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 44 TIFVTNHEVGEIVSITPDGN---------------QQIHAT-VEGKVSGLAF-------TSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp CEEEEETTTTEEEEECTTCC---------------EEEEEE-CSSEEEEEEE-------CTTSCEEEEEECTTSCEEEEE
T ss_pred CEEEEeCCCCeEEEECCCCc---------------eEEEEe-CCCCceeEEE-------cCCCcEEEEeccCCcceEEEE
Confidence 87777778899999987642 111121 2346789999 88888666554332 46667
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEee------
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVG------ 236 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------ 236 (318)
|..+++......... ......++.. +++..+++...++.|+.+ +...++.+...
T Consensus 101 d~~~g~~~~~~~~~~-------------~~~~~g~~~~-----~~~~~~v~d~~~g~i~~~--d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 101 VKSDGTVETLLTLPD-------------AIFLNGITPL-----SDTQYLTADSYRGAIWLI--DVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp ECTTSCEEEEEECTT-------------CSCEEEEEES-----SSSEEEEEETTTTEEEEE--ETTTTEEEEEEECGGGS
T ss_pred cCCCCeEEEEEeCCC-------------ccccCccccc-----CCCcEEEEECCCCeEEEE--eCCCCcEeEEEECCccc
Confidence 777665432221111 0012333433 555555555567877777 54433211110
Q ss_pred --eeecccCceeEEEEcCCCCEE-EEecCCCcEEEEEecC
Q 021036 237 --SYNAHDQVVTGLAWAFDGCCL-YSCSQDNFVRSWIFHG 273 (318)
Q Consensus 237 --~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~ 273 (318)
.....-.....+ +|++.+| ++-...+.|..|++..
T Consensus 161 ~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 161 RSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp CSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred cccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 000111233455 7887755 4555678899999874
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.89 E-value=0.0072 Score=49.92 Aligned_cols=194 Identities=10% Similarity=-0.037 Sum_probs=106.2
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEE
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLW 99 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw 99 (318)
.+.-+....|+..|+.+.+....+. ... ....++|++.. +.++++-...+.|..+
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~--~~~------~p~g~~~d~~~-----------------~~ly~~D~~~~~I~~~ 57 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP--NLR------NVVALDTEVAS-----------------NRIYWSDLSQRMICST 57 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC--SCS------SEEEEEEETTT-----------------TEEEEEETTTTEEEEE
T ss_pred EEEEECCCeEEEEECCCcceEehhc--CCC------ceEEEEEEeCC-----------------CEEEEEECCCCcEEEE
Confidence 3444555678999988765433322 111 12348888765 3566666677889999
Q ss_pred EccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeeccccc
Q 021036 100 RICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCV 178 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 178 (318)
+....... ......+.........+++ .. ++.++++-...+.|.+.++........+..
T Consensus 58 ~~~g~~~~----------~~~~~~~~~~~~~p~glav-------d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--- 117 (316)
T 1ijq_A 58 QLDRAHGV----------SSYDTVISRDIQAPDGLAV-------DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--- 117 (316)
T ss_dssp EC------------------CEEEECSSCSCCCEEEE-------ETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC---
T ss_pred ECCCCCCC----------cccEEEEeCCCCCcCEEEE-------eecCCeEEEEECCCCEEEEEeCCCCceEEEEEC---
Confidence 88751000 0011112222234467777 53 455556666778999999875432221111
Q ss_pred ccccceeeeeecccceeEEEEeeccCCCCce-EEEEEeCC-CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCE
Q 021036 179 PFSLLKEVVTVNTVPISVLSLILPVQSPRLM-LLAVGKGS-GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCC 256 (318)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~l~~~~~d-g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 256 (318)
.......++++ |.+. ++.+.... +.|..++.+ ....+.+. ...-.....++++|++..
T Consensus 118 -----------~~~~P~~iavd-----p~~g~ly~~d~~~~~~I~~~~~d--G~~~~~~~--~~~~~~P~gla~d~~~~~ 177 (316)
T 1ijq_A 118 -----------NGSKPRAIVVD-----PVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLV--TENIQWPNGITLDLLSGR 177 (316)
T ss_dssp -----------TTCCEEEEEEE-----TTTTEEEEEECSSSCEEEEEETT--SCCEEEEE--CSSCSCEEEEEEETTTTE
T ss_pred -----------CCCCcceEEeC-----CCCCEEEEEccCCCCeEEEEcCC--CCCeEEEE--ECCCCCceEEEEeccCCE
Confidence 11245788998 7544 44444333 677777443 32211211 122345689999997665
Q ss_pred EE-EecCCCcEEEEEecCCceee
Q 021036 257 LY-SCSQDNFVRSWIFHGNSLSQ 278 (318)
Q Consensus 257 l~-s~~~d~~v~iwd~~~~~~~~ 278 (318)
|. +-+..+.|..+|+.+.....
T Consensus 178 lY~~D~~~~~I~~~d~dg~~~~~ 200 (316)
T 1ijq_A 178 LYWVDSKLHSISSIDVNGGNRKT 200 (316)
T ss_dssp EEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEECCCCeEEEEecCCCceEE
Confidence 54 44566789999987644433
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.88 E-value=0.0055 Score=53.08 Aligned_cols=161 Identities=7% Similarity=-0.114 Sum_probs=90.2
Q ss_pred cEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc
Q 021036 130 WITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 208 (318)
....+++ .+ ++.++++-..++.|+.+|..++.....+.... ....-..++++ |++
T Consensus 229 ~P~giav-------d~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~------------~~~~~~~ia~d-----pdG 284 (433)
T 4hw6_A 229 GAKTCAV-------HPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD------------TKGSNFHIVWH-----PTG 284 (433)
T ss_dssp SBCCCEE-------CTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS------------CCSSCEEEEEC-----TTS
T ss_pred CCCEEEE-------eCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC------------CCCCcccEEEe-----CCC
Confidence 3456777 66 67666666677889999988665422221110 01122468999 899
Q ss_pred eEEE-EEeCCCcEEEeeeccCCCeeeEeeeeecc---------------cCceeEEEE---------cCCCCEEEEecCC
Q 021036 209 MLLA-VGKGSGSFDLWKCDISCNKFDKVGSYNAH---------------DQVVTGLAW---------AFDGCCLYSCSQD 263 (318)
Q Consensus 209 ~~l~-~~~~dg~i~vw~~~~~~~~~~~~~~~~~h---------------~~~v~~~~~---------~~~~~~l~s~~~d 263 (318)
+.|+ +-...+.|+.++++..++.+.....+.+. -.....+++ .++|.++++-...
T Consensus 285 ~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n 364 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS 364 (433)
T ss_dssp SEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC
Confidence 8554 44567888888666544432111122111 123567888 7777777777777
Q ss_pred CcEEEEEecCCceeeeecCCCC---CCccccccCCCcceeeeEEEEc-CCCcEEEE
Q 021036 264 NFVRSWIFHGNSLSQVSIPTNT---PGLQSCTDLPDAFVSCLGMAVS-PGNLVVAM 315 (318)
Q Consensus 264 ~~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~v~~s-p~~~~l~~ 315 (318)
+.|+.++. .+.+..+...... ....+............+|+++ ++|.++++
T Consensus 365 ~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa 419 (433)
T 4hw6_A 365 HTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIG 419 (433)
T ss_dssp TEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred CEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEE
Confidence 88999985 4555554433220 0000100011223456899999 56665543
No 266
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.86 E-value=0.013 Score=54.94 Aligned_cols=198 Identities=10% Similarity=0.073 Sum_probs=113.1
Q ss_pred cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeec----cccccEEEEEeeeecCCCCCCCcE
Q 021036 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ----AHNSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
.|.++..+++|++. .|+.++-|..++..++.. +...... -....|.++.. ..+|.
T Consensus 311 ~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~------------~~~~~~~~~~~l~~~~V~~i~~-------d~~g~- 369 (795)
T 4a2l_A 311 SVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRF------------KNIRNIPYKNSLSDNVVSCIVE-------DKDKN- 369 (795)
T ss_dssp CEEEEEECTTSCEE-EEESSSCEEEECGGGGSS------------EEECCCTTSSSCSCSSEEEEEE-------CTTSC-
T ss_pred cEEEEEEeCCcCEE-EEECCCCeEEeCCCcccc------------eEEcCCCCCCCCCCCeeEEEEE-------CCCCC-
Confidence 45566666666655 466666688888765431 1111100 12456999988 66775
Q ss_pred EEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCC
Q 021036 150 LVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISC 229 (318)
Q Consensus 150 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 229 (318)
|-.|+.++-|..||..+++..........+. .......|.++... +++.+|..|+.++-+..| +..+
T Consensus 370 lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~------~~l~~~~v~~i~~d-----~~g~~lWigt~~~Gl~~~--d~~~ 436 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPITQRFTSYTLQEDESA------RGIGSNNIKAVYVD-----EKKSLVYIGTHAGGLSIL--HRNS 436 (795)
T ss_dssp EEEEESSSCEEEECTTTCCEEEECCC------------CCSCSCEEEEEEE-----TTTTEEEEEETTTEEEEE--ETTT
T ss_pred EEEEECCCCeEEEcCCCCcEEEEecCCCCcc------cCCCCccEEEEEEc-----CCCCEEEEEeCcCceeEE--eCCC
Confidence 4457777789999987665332211110000 00012368888888 788757777776778888 5555
Q ss_pred CeeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEc
Q 021036 230 NKFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVS 307 (318)
Q Consensus 230 ~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 307 (318)
+++....... .....|.++..+++|.+.+.. . +-+.+||..++....+....... .-....|.++...
T Consensus 437 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~i~~d 506 (795)
T 4a2l_A 437 GQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGT--------PVVSKQITTLFRD 506 (795)
T ss_dssp CCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCC--------BCCCCCEEEEEEC
T ss_pred CcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEcccccccc--------ccCCceEEEEEEC
Confidence 5533321100 134578999988888855544 3 45888998776655443220000 0012367888888
Q ss_pred CCCcEEEE
Q 021036 308 PGNLVVAM 315 (318)
Q Consensus 308 p~~~~l~~ 315 (318)
++|.+.+.
T Consensus 507 ~~g~lWig 514 (795)
T 4a2l_A 507 SHKRLWIG 514 (795)
T ss_dssp TTCCEEEE
T ss_pred CCCCEEEE
Confidence 88765543
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.83 E-value=0.00069 Score=63.19 Aligned_cols=155 Identities=13% Similarity=0.012 Sum_probs=82.5
Q ss_pred cccccCCC-CCccEEEEecC-CC----cEEEEEccCC-ccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC
Q 021036 74 PVPQNGSS-NWFSILAVGGR-SG----KVSLWRICVP-KCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 74 ~v~~~~~s-~~~~~l~~g~~-dg----~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 146 (318)
.+....+| |+|++||.+.. +| .|+++|+.++ +.+. ..+.. ....+.| +++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-------------~~~~~---~~~~~~W-------spD 231 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-------------DKVSG---TNGEIVW-------GPD 231 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-------------CCEEE---ECSCCEE-------CSS
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-------------ccccC---ceeeEEE-------ecC
Confidence 44555566 66687775432 23 5999999986 4210 01111 1346889 899
Q ss_pred CcEEEEEeCC-----CcEEEEECCCccee--eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC---
Q 021036 147 QVLLVTGSSD-----GSVRIWDGYIQELQ--KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG--- 216 (318)
Q Consensus 147 ~~~l~s~~~d-----~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~--- 216 (318)
|+.|+....| ..|.++++.+++.. ..+... .......+.|+ |||+.|+..+.
T Consensus 232 g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~-------------~~~~~~~~~~S-----pDg~~l~~~~~~~~ 293 (751)
T 2xe4_A 232 HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEH-------------NPLFSAFMYKA-----ADTNTLCIGSQSPE 293 (751)
T ss_dssp TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECC-------------CTTCEEEEEEC-----TTSSEEEEEEECSS
T ss_pred CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecC-------------CCceEEEEEEC-----CCCCEEEEEecCCC
Confidence 9877777665 25777787765422 111110 11123467788 99988776652
Q ss_pred CCcEEEeeeccCCC--ee--eEeeeeecccCceeEEEEcCCCCEEEEecCC----CcEEEEEecC
Q 021036 217 SGSFDLWKCDISCN--KF--DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD----NFVRSWIFHG 273 (318)
Q Consensus 217 dg~i~vw~~~~~~~--~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~ 273 (318)
...|+++ +..++ .. ..+ ..........+.|+..+.+++....+ ..|..+++.+
T Consensus 294 ~~~l~~~--d~~~~~~~~~~~~l--~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 294 TAEVHLL--DLRKGNAHNTLEIV--RPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CEEEEEE--ESSSCTTCCCEEES--SCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CceEEEE--ECCCCCCCceeEEe--ecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 2335555 55443 22 122 22234455556555444444444443 3566666554
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.82 E-value=0.011 Score=49.66 Aligned_cols=145 Identities=6% Similarity=-0.048 Sum_probs=84.9
Q ss_pred cccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC
Q 021036 128 NSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP 206 (318)
Q Consensus 128 ~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~ 206 (318)
......++| .+ ++.++++-...+.|..+++..+.....+... ......++++ +
T Consensus 72 ~~~~~~l~~-------d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~--------------~~~p~glavd-----~ 125 (349)
T 3v64_C 72 LENAIALDF-------HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG--------------LESPGGLAVD-----W 125 (349)
T ss_dssp CSCEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--------------CSCCCEEEEE-----T
T ss_pred CCceEEEEE-------eccccEEEEEeccCCceEEEecCCCCceEEEeCC--------------CCCccEEEEe-----c
Confidence 345788999 54 4555555556788999998765432222111 1134678888 5
Q ss_pred -CceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEE-EEecCC-CcEEEEEecCCceeeeecCC
Q 021036 207 -RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCL-YSCSQD-NFVRSWIFHGNSLSQVSIPT 283 (318)
Q Consensus 207 -~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d-~~v~iwd~~~~~~~~~~~~~ 283 (318)
.+.++++-...+.|.+.+.+ ......+ +...-.....++++|.+..| .+-... +.|..+++.+.....+....
T Consensus 126 ~~g~ly~~d~~~~~I~~~~~d--G~~~~~l--~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 201 (349)
T 3v64_C 126 VHDKLYWTDSGTSRIEVANLD--GAHRKVL--LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH 201 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETT--SCSCEEE--ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSS
T ss_pred CCCeEEEEcCCCCeEEEEcCC--CCceEEE--EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECC
Confidence 55666666677889888544 3221111 22233456899999965544 444444 77888887764433322111
Q ss_pred CCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 284 NTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 284 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
....++++|+|++..|..+
T Consensus 202 --------------~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 202 --------------LFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp --------------CSCEEEEEEETTTTEEEEE
T ss_pred --------------CCCcceEEEeCCCCEEEEE
Confidence 1245788898866655543
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.74 E-value=0.0044 Score=51.02 Aligned_cols=173 Identities=6% Similarity=-0.029 Sum_probs=102.7
Q ss_pred eeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecc----cc--ccEE
Q 021036 59 AVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA----HN--SWIT 132 (318)
Q Consensus 59 ~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~--~~v~ 132 (318)
+..|++.. +.++++.-..|.|..|+...+.. ..+ .+.+ .. ..+.
T Consensus 17 ~~~wd~~~-----------------g~~~vs~l~~g~V~~~~~~~~~~------------~~~-~~~~~s~~g~~~~~~s 66 (334)
T 2p9w_A 17 DTIYDRTR-----------------QVFYQSNLYKGRIEVYNPKTQSH------------FNV-VIDGASSNGDGEQQMS 66 (334)
T ss_dssp CEEEETTT-----------------TEEEEEETTTTEEEEECTTTCCE------------EEE-CCTTTCCSSCCSEEEE
T ss_pred CccCcCCC-----------------CEEEEEeccCCEEEEEcCCCCeE------------EEE-ecCCccccCCCcceee
Confidence 47888766 35555555799999999875431 122 2222 11 1357
Q ss_pred EEEeeeecCCCCCCCcEEEEEe-------------CCCcEEEEECC---CcceeeeecccccccccceeeeeecccceeE
Q 021036 133 SISLAVLSSDSSNPQVLLVTGS-------------SDGSVRIWDGY---IQELQKSAEAHCVPFSLLKEVVTVNTVPISV 196 (318)
Q Consensus 133 ~~~~~p~~~~~~~~~~~l~s~~-------------~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 196 (318)
.|.|.- +.++++++++.. .+..|..+|+. +++.+.........-.. .............
T Consensus 67 Gl~~~~----~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~-~~~~g~~~~~~nD 141 (334)
T 2p9w_A 67 GLSLLT----HDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEF-EKKAGKRPFGVVQ 141 (334)
T ss_dssp EEEESS----SSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHH-HHHHSSCCEEEEE
T ss_pred EEEEec----cCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccc-cccccccccCCce
Confidence 888800 025677777543 26789999998 77766554322100000 0000001124778
Q ss_pred EEEeeccCCCCceEEEEEeCC-CcEEEeeeccCCCeeeEeee-e--ecccCceeEEEEcCCCCEEEEecCCCcEEEEEec
Q 021036 197 LSLILPVQSPRLMLLAVGKGS-GSFDLWKCDISCNKFDKVGS-Y--NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH 272 (318)
Q Consensus 197 l~~~~~~~~~~~~~l~~~~~d-g~i~vw~~~~~~~~~~~~~~-~--~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 272 (318)
++.. ++|+..++++.. +.|... +........... . .......+.++++|+|..|++...++.+..+|+.
T Consensus 142 vavD-----~~GnaYVt~s~~~~~I~rV--~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 142 SAQD-----RDGNSYVAFALGMPAIARV--SADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEC-----TTSCEEEEEEESSCEEEEE--CTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eEEC-----CCCCEEEeCCCCCCeEEEE--eCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 9998 999999999887 776666 443332111110 1 1112236789999999988777669999999987
Q ss_pred C
Q 021036 273 G 273 (318)
Q Consensus 273 ~ 273 (318)
.
T Consensus 215 ~ 215 (334)
T 2p9w_A 215 K 215 (334)
T ss_dssp S
T ss_pred C
Confidence 4
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.68 E-value=0.015 Score=49.44 Aligned_cols=165 Identities=6% Similarity=-0.062 Sum_probs=94.1
Q ss_pred CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceee
Q 021036 93 SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQK 171 (318)
Q Consensus 93 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~ 171 (318)
...|+..++...+. ..+.........++| .+ ++.++++-...+.|..+++..+....
T Consensus 95 ~~~I~~i~~~~~~~---------------~~~~~~~~~~~gl~~-------d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 95 RIDIRQVLPHRSEY---------------TLLLNNLENAIALDF-------HHRRELVFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp BSCEEEECTTSCCC---------------EEEECSCSCEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCCEEE
T ss_pred CccceeeccCCCcE---------------EEEecCCCccEEEEE-------ecCCCeEEEEeCCCCcEEEEecCCCCcEE
Confidence 35688888775431 112222345788999 54 45556665667889999987654322
Q ss_pred eecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEE
Q 021036 172 SAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAW 250 (318)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 250 (318)
.+... ......++++ + .+.++++-...+.|.+.+++ ......+ +.........+++
T Consensus 153 ~~~~~--------------~~~p~glavd-----~~~g~lY~~d~~~~~I~~~~~d--g~~~~~l--~~~~l~~P~giav 209 (386)
T 3v65_B 153 VVSTG--------------LESPGGLAVD-----WVHDKLYWTDSGTSRIEVANLD--GAHRKVL--LWQSLEKPRAIAL 209 (386)
T ss_dssp EECSS--------------CSCCCCEEEE-----TTTTEEEEEETTTTEEEECBTT--SCSCEEE--ECSSCSCEEEEEE
T ss_pred EEeCC--------------CCCccEEEEE-----eCCCeEEEEcCCCCeEEEEeCC--CCceEEe--ecCCCCCCcEEEE
Confidence 22111 1134567887 5 45666666667888887443 3221111 2223345689999
Q ss_pred cCCCCEEEEe-cCC-CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 251 AFDGCCLYSC-SQD-NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 251 ~~~~~~l~s~-~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+|.+..|+.. ... +.|..+++.+.....+.... . ...++++|+|++..|..+
T Consensus 210 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~-~-------------~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 210 HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH-L-------------FWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-C-------------SCEEEEEEEGGGTEEEEE
T ss_pred EcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-C-------------CCeeeEEEeCCCCEEEEE
Confidence 9976655444 344 67888887764433332111 1 135788888766655543
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.0035 Score=54.25 Aligned_cols=143 Identities=8% Similarity=0.019 Sum_probs=83.4
Q ss_pred cEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc
Q 021036 130 WITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 208 (318)
....|++ ++ ++..|..+...+.|+.+|+..+....... .......++++ +++
T Consensus 138 ~P~~lav-------dp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~---------------~~~~P~~ia~d-----~~G 190 (430)
T 3tc9_A 138 GAVWLSF-------DPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS---------------GLSKVRTICWT-----HEA 190 (430)
T ss_dssp CCCEEEE-------ETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---------------CCSCEEEEEEC-----TTS
T ss_pred CCCEEEE-------CCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---------------CCCCcceEEEe-----CCC
Confidence 3467788 65 34445555554788888887655433222 12256789999 899
Q ss_pred eEEEEEeC-CC----cEEEeeeccCCCeeeEeeeeecccCceeEEEEcC-CCCEEEEecCCCcEEEEEecCCceeeeecC
Q 021036 209 MLLAVGKG-SG----SFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAF-DGCCLYSCSQDNFVRSWIFHGNSLSQVSIP 282 (318)
Q Consensus 209 ~~l~~~~~-dg----~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 282 (318)
+.|+++.. ++ .+.++ +.. +.+.....+.. ......++++| +|.++++-..++.|..++..++....+...
T Consensus 191 ~~lyvad~~~~~~~~~v~~~--~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 191 DSMIITNDQNNNDRPNNYIL--TRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp SEEEEEECCSCTTSEEEEEE--EGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCcccceEEEE--eCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc
Confidence 86666553 22 23333 322 22211122221 23457788999 677777777788999999887655332221
Q ss_pred CCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 283 TNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 283 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+.. .....++|+|+|++|..+
T Consensus 267 ~~~-------------~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 267 QDS-------------GWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp SSS-------------SCCEEEEECTTSSEEEEE
T ss_pred CCC-------------CcceeEEEcCCCCEEEEE
Confidence 111 134789999999855543
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.67 E-value=0.0021 Score=59.00 Aligned_cols=166 Identities=21% Similarity=0.122 Sum_probs=94.0
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecccc-ccEEEEEeeeecCCCCCCCcEEEEEeC------C
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHN-SWITSISLAVLSSDSSNPQVLLVTGSS------D 156 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~l~s~~~------d 156 (318)
+..++.++.|+.|..+|.++++. +-.+.... .....+.-.|. -.++ .++.+.. +
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~--------------~W~~~~~~~~~~~~~~~~P~----v~~~-~v~vg~~~~~~~~~ 177 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKA--------------IWSQQTTDPAKPYSITGAPR----VVKG-KVIIGNGGAEYGVR 177 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCE--------------EEEEECSCTTSSCBCCSCCE----EETT-EEEECCBCTTTCCB
T ss_pred CCEEEEEcCCCEEEEEECCCCCE--------------eeeeccCCCCCcceecCCCE----EECC-EEEEeCCCCCcCCC
Confidence 46788888999999999999763 22222110 00000111000 0133 4444433 5
Q ss_pred CcEEEEECCCcceeeeecccc-ccccc-----c---eeee--------eecccceeEEEEeeccCCCCceEEEEEeCCCc
Q 021036 157 GSVRIWDGYIQELQKSAEAHC-VPFSL-----L---KEVV--------TVNTVPISVLSLILPVQSPRLMLLAVGKGSGS 219 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~-~~~~~-----~---~~~~--------~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~ 219 (318)
+.|..+|..+|+.+..+.... .+... + .... .........++++ ++..+++.+..++.
T Consensus 178 g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d-----~~~~~vy~~~~~g~ 252 (668)
T 1kv9_A 178 GFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYD-----PELDLLYVGTGNGS 252 (668)
T ss_dssp CEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEE-----TTTTEEEEECCCEE
T ss_pred CEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEc-----CCCCEEEEeCCCCC
Confidence 899999999999988765311 11000 0 0000 0111223356777 77788888876663
Q ss_pred -------------------EEEeeeccCCCeeeEeeeeec--cc-------CceeEEEEcCCCC---EEEEecCCCcEEE
Q 021036 220 -------------------FDLWKCDISCNKFDKVGSYNA--HD-------QVVTGLAWAFDGC---CLYSCSQDNFVRS 268 (318)
Q Consensus 220 -------------------i~vw~~~~~~~~~~~~~~~~~--h~-------~~v~~~~~~~~~~---~l~s~~~d~~v~i 268 (318)
|..+ |..+++ .+..++. |. .+.....+..+|+ .++.++.+|.+++
T Consensus 253 ~w~~~~~~~~~gd~l~~~~v~Al--D~~tG~--~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~ 328 (668)
T 1kv9_A 253 PWNREVRSPGGGDNLYLSSILAI--RPDTGK--LAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYV 328 (668)
T ss_dssp SSCHHHHSTTCCCCTTTTEEEEE--CTTTCC--EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE
T ss_pred ccccCCCCCCCCCceeeeeEEEE--cCCCCc--eeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEE
Confidence 6665 777877 3444432 22 2222223334665 6889999999999
Q ss_pred EEecCCcee
Q 021036 269 WIFHGNSLS 277 (318)
Q Consensus 269 wd~~~~~~~ 277 (318)
+|..++++.
T Consensus 329 lD~~tG~~l 337 (668)
T 1kv9_A 329 LDRTNGKLI 337 (668)
T ss_dssp EETTTCCEE
T ss_pred EECCCCCEe
Confidence 999988765
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=0.0056 Score=53.01 Aligned_cols=153 Identities=7% Similarity=-0.024 Sum_probs=89.1
Q ss_pred ccccCCCC-CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 75 VPQNGSSN-WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 75 v~~~~~s~-~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
...++++| ++..|+.....+.|+.+|.+.+. +..+.........++| .+++++|+.+
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~---------------v~~~~~~~~~P~~ia~-------d~~G~~lyva 196 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY---------------VSTVYSGLSKVRTICW-------THEADSMIIT 196 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTE---------------EEEEECCCSCEEEEEE-------CTTSSEEEEE
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCE---------------EEEEecCCCCcceEEE-------eCCCCEEEEE
Confidence 44566665 23445554444788888887643 2222233456789999 8888855555
Q ss_pred eC-CC----cEEEEECCCccee--eeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeee
Q 021036 154 SS-DG----SVRIWDGYIQELQ--KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKC 225 (318)
Q Consensus 154 ~~-d~----~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~ 225 (318)
.. ++ .+...+ ..+... ..+. .......++++ | ++.++++-..++.|..|
T Consensus 197 d~~~~~~~~~v~~~~-~~g~~~~~~~l~---------------~~~~p~giavd-----p~~g~lyv~d~~~~~V~~~-- 253 (430)
T 3tc9_A 197 NDQNNNDRPNNYILT-RESGFKVITELT---------------KGQNCNGAETH-----PINGELYFNSWNAGQVFRY-- 253 (430)
T ss_dssp ECCSCTTSEEEEEEE-GGGTSCSEEEEE---------------ECSSCCCEEEC-----TTTCCEEEEETTTTEEEEE--
T ss_pred eCCCCcccceEEEEe-CCCceeeeeeec---------------cCCCceEEEEe-----CCCCEEEEEECCCCEEEEE--
Confidence 54 22 233333 223221 1111 11235677888 7 67777776678888888
Q ss_pred ccCCCeeeEeeeeecccCceeEEEEcCCCCE-EEEecCCCcEEEEEecC
Q 021036 226 DISCNKFDKVGSYNAHDQVVTGLAWAFDGCC-LYSCSQDNFVRSWIFHG 273 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~ 273 (318)
+........+.... .......++|+|+|++ +++-...+.|..++...
T Consensus 254 ~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 254 DFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 45454422222221 1234678999999994 45556678899988764
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.65 E-value=0.037 Score=51.65 Aligned_cols=156 Identities=10% Similarity=-0.015 Sum_probs=85.6
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCC-cEEEEEeCCCcEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQ-VLLVTGSSDGSVRIW 162 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~-~~l~s~~~d~~v~iw 162 (318)
+.++++-...+.|+.+++...... ......+.........|++ ...+ +++++-...+.|.+.
T Consensus 436 ~~lY~sD~~~~~I~~~~l~g~~~~----------~~~~~vi~~~l~~P~GLAv-------D~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 436 NRIYWSDLSQRMICSTQLDRAHGV----------SSYDTVISRDIQAPDGLAV-------DWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp TEEEEEETTTTEEEEEEC------------------CEEEECSSCSCCCEEEE-------ETTTTEEEEEETTTTEEEEE
T ss_pred CeeEEeeccceeEEEEeccCCCCC----------cceeEEEecCCCCcceeee-------eecCCcEEEEecCCCeEEEE
Confidence 356666666788888888642100 0111222222344567777 4444 556666667899999
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeCC-CcEEEeeeccCCCeeeEeeeeec
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKGS-GSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~d-g~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
++........+.. .......|+++ |. +.++++-..+ +.|.+. ++.......+ +..
T Consensus 499 ~ldG~~~~~l~~~--------------~l~~P~gIaVD-----p~~g~LYwtD~g~~~~I~~~--~~dG~~~~~l--v~~ 555 (791)
T 3m0c_C 499 DTKGVKRKTLFRE--------------NGSKPRAIVVD-----PVHGFMYWTDWGTPAKIKKG--GLNGVDIYSL--VTE 555 (791)
T ss_dssp ETTSSSEEEEEEC--------------TTCCEEEEEEE-----TTTTEEEEEECSSSCEEEEE--ETTSCCEEEE--ECS
T ss_pred eCCCCeEEEEEeC--------------CCCCcceEEEe-----cCCCCEEEecCCCCCeEEEE--ecCCCceEEE--EeC
Confidence 9875432222211 11246789998 66 4444443233 667776 4434331121 222
Q ss_pred ccCceeEEEEcCCCCEEEEe-cCCCcEEEEEecCCceeee
Q 021036 241 HDQVVTGLAWAFDGCCLYSC-SQDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 241 h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~ 279 (318)
.-.....|++++.+..|+.+ .....|..+++.+.....+
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 33467899999876655554 4557899999876555444
No 275
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.55 E-value=0.047 Score=49.65 Aligned_cols=189 Identities=11% Similarity=-0.026 Sum_probs=106.9
Q ss_pred eEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEEEE
Q 021036 20 TVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVSLW 99 (318)
Q Consensus 20 ~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~iw 99 (318)
.+.-+....|+..++.+......+..... .....++|++.. +.++++-..++.|+.+
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~------~~~~~l~~d~~~-----------------~~lywtD~~~~~I~r~ 64 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTGV------KEASALDFDVTD-----------------NRIYWTDISLKTISRA 64 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCSC------SCEEEEEEETTT-----------------TEEEEEETTTTEEEEE
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCCC------CceEEEEEECCC-----------------CEEEEEECCCCeEEEE
Confidence 44445778899999986543222221111 112347888766 4566666778889888
Q ss_pred EccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeeccccc
Q 021036 100 RICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCV 178 (318)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 178 (318)
+++.... + ..+.........+++ .. .++++++-...+.|.+.++........+..
T Consensus 65 ~~~g~~~------------~--~v~~~g~~~P~GlAv-------D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~--- 120 (628)
T 4a0p_A 65 FMNGSAL------------E--HVVEFGLDYPEGMAV-------DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK--- 120 (628)
T ss_dssp ETTSCSC------------E--EEECSSCSCCCEEEE-------ETTTTEEEEEETTTTEEEEEETTSTTCEEEECS---
T ss_pred ECCCCCc------------E--EEEeCCCCCcceEEE-------EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC---
Confidence 8875321 1 112211234566777 43 455556656678899999875432211111
Q ss_pred ccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEe-CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCE
Q 021036 179 PFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGK-GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCC 256 (318)
Q Consensus 179 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 256 (318)
.-.....|+++ |. |.++.+-. ..+.|...+ +.......+. ..-.....+++++++..
T Consensus 121 -----------~l~~P~~iavd-----p~~G~lY~tD~g~~~~I~r~~--~dG~~~~~l~---~~~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 121 -----------DLDSPRALALD-----PAEGFMYWTEWGGKPKIDRAA--MDGSERTTLV---PNVGRANGLTIDYAKRR 179 (628)
T ss_dssp -----------SCCCEEEEEEE-----TTTTEEEEEECSSSCEEEEEE--TTSCSCEEEE---CSCSSEEEEEEETTTTE
T ss_pred -----------CCCCcccEEEc-----cCCCeEEEeCCCCCCEEEEEe--CCCCceEEEE---CCCCCcceEEEccccCE
Confidence 11245789998 64 55544432 245666664 4333322222 23456789999998665
Q ss_pred EEEe-cCCCcEEEEEecCCce
Q 021036 257 LYSC-SQDNFVRSWIFHGNSL 276 (318)
Q Consensus 257 l~s~-~~d~~v~iwd~~~~~~ 276 (318)
|..+ ...+.|..+|+.+...
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC
T ss_pred EEEEECCCCEEEEEcCCCCce
Confidence 5554 5567899999876443
No 276
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.55 E-value=0.009 Score=53.85 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=34.6
Q ss_pred CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 217 SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 217 dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
+|.|..| |..+++ .+.+.... .++..-.....+.+++.++.|+.++.||.++++..
T Consensus 465 ~G~l~A~--D~~tG~--~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAM--DPVSGK--VVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEE--CTTTCC--EEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEE--ECCCCC--EEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 5667777 666766 33333322 22222112224667888999999999999987754
No 277
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.52 E-value=0.019 Score=53.70 Aligned_cols=166 Identities=10% Similarity=0.043 Sum_probs=93.0
Q ss_pred cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
.|.++..++++.+.+ |+.++-+..++..+++. +...........|.++.. ..++.+.+ |
T Consensus 408 ~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~------------~~~~~~~~~~~~v~~i~~-------d~~g~lwi-g 466 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF------------QIIELEKNELLDVRVFYE-------DKNKKIWI-G 466 (781)
T ss_dssp BEEEEEECTTSCEEE-EETTEEEEEECSSSCEE------------EECCSTTTCCCCEEEEEE-------CTTSEEEE-E
T ss_pred ceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE------------EEeccCCCCCCeEEEEEE-------CCCCCEEE-E
Confidence 344555555556555 66656688888876431 111100123467899988 67776554 4
Q ss_pred eCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeee
Q 021036 154 SSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFD 233 (318)
Q Consensus 154 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 233 (318)
+. +-|..+|..+++.......... ......|.++... ++|.+.+.....| +..| +..+.++.
T Consensus 467 t~-~Gl~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~i~~d-----~~g~lWigt~~~G-l~~~--~~~~~~~~ 528 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIHHYDTSNS---------QLLENFVRSIAQD-----SEGRFWIGTFGGG-VGIY--TPDMQLVR 528 (781)
T ss_dssp ET-TEEEEEESSSSSCCEEECTTTS---------SCSCSCEEEEEEC-----TTCCEEEEESSSC-EEEE--CTTCCEEE
T ss_pred EC-CceEEEeCCCCeEEecccCccc---------ccccceeEEEEEc-----CCCCEEEEEcCCC-EEEE--eCCCCeEE
Confidence 44 5688899877654322111100 0012367888887 7777555443345 6666 55555533
Q ss_pred Eeeeeec-ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeee
Q 021036 234 KVGSYNA-HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 234 ~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 279 (318)
......+ ....|.++..+++|.+.++.. +|-|..||..++....+
T Consensus 529 ~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~ 574 (781)
T 3v9f_A 529 KFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVF 574 (781)
T ss_dssp EECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEE
T ss_pred EccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEc
Confidence 3221111 235688999888888655444 66558888877655443
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.50 E-value=0.065 Score=50.13 Aligned_cols=191 Identities=9% Similarity=-0.017 Sum_probs=106.6
Q ss_pred cccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEee-------eccccccEEEEEeeeecCCCCCC
Q 021036 74 PVPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGL-------FQAHNSWITSISLAVLSSDSSNP 146 (318)
Q Consensus 74 ~v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-------~~~h~~~v~~~~~~p~~~~~~~~ 146 (318)
.|.++..+.+|.+. .|+.++-|..++..++.. ..... .......|.++.. ..+
T Consensus 314 ~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~v~~i~~-------d~~ 373 (781)
T 3v9f_A 314 SARYIFQDSFNNIW-IGTWGGGINFISNAPPTF------------HTWSYSPTQMNESSLSNKVVSSVCD-------DGQ 373 (781)
T ss_dssp CEEEEEECSSCCEE-EEEBSSCEEEECSSCCSC------------EEEC----CCCSSCCSSSCEEEEEE-------CTT
T ss_pred eEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcc------------eeeccCccccccCCCCCcceEEEEE-------cCC
Confidence 35555555556654 466566688888775432 11110 0112356899988 666
Q ss_pred CcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeec
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCD 226 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~ 226 (318)
|. |..|+.++-|..||..+++... +.... ......|.++... +++.+. .|+.++-+..| +
T Consensus 374 g~-lWigt~~~Gl~~~~~~~~~~~~-~~~~~----------~~~~~~v~~i~~d-----~~g~lW-igt~~~Gl~~~--~ 433 (781)
T 3v9f_A 374 GK-LWIGTDGGGINVFENGKRVAIY-NKENR----------ELLSNSVLCSLKD-----SEGNLW-FGTYLGNISYY--N 433 (781)
T ss_dssp SC-EEEEEBSSCEEEEETTEEEEEC-C---------------CCCSBEEEEEEC-----TTSCEE-EEETTEEEEEE--C
T ss_pred CC-EEEEeCCCcEEEEECCCCeEEE-ccCCC----------CCCCcceEEEEEC-----CCCCEE-EEeccCCEEEE--c
Confidence 65 4456666778889887543221 11000 1123467888876 666654 46665667777 6
Q ss_pred cCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEE
Q 021036 227 ISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAV 306 (318)
Q Consensus 227 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 306 (318)
..+++++...........|.++...++|.+.+ |+. +-|..||..++....+....... .....|.++..
T Consensus 434 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~i~~ 502 (781)
T 3v9f_A 434 TRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQ---------LLENFVRSIAQ 502 (781)
T ss_dssp SSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSS---------CSCSCEEEEEE
T ss_pred CCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccc---------cccceeEEEEE
Confidence 66665433211011345788998888887544 344 56888998776654433221100 01236778888
Q ss_pred cCCCcEEEE
Q 021036 307 SPGNLVVAM 315 (318)
Q Consensus 307 sp~~~~l~~ 315 (318)
.++|.+.+.
T Consensus 503 d~~g~lWig 511 (781)
T 3v9f_A 503 DSEGRFWIG 511 (781)
T ss_dssp CTTCCEEEE
T ss_pred cCCCCEEEE
Confidence 777765443
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.49 E-value=0.0014 Score=60.40 Aligned_cols=153 Identities=8% Similarity=-0.065 Sum_probs=79.4
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCC-CCCcEEEEEeCCCcEEEEE
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSS-NPQVLLVTGSSDGSVRIWD 163 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~-~~~~~l~s~~~d~~v~iwd 163 (318)
.++++-...+.|+.+++...... ......+.........|++ . ..+.++++-...+.|.+.+
T Consensus 419 ~Ly~sD~~~~~I~~~~~~g~~~~----------~~~~~~i~~~~~~P~glav-------D~~~g~LY~tD~~~~~I~v~d 481 (699)
T 1n7d_A 419 RIYWSDLSQRMICSTQLDRAHGV----------SSYDTVISRDIQAPDGLAV-------DWIHSNIYWTDSVLGTVSVAD 481 (699)
T ss_dssp EEEECCTTTTSBEEEESCCCCC-----------CCCCCBCCSCC--CCCEEC-------CCSSSBCEECCTTTSCEEEEB
T ss_pred eEEEEecCCCeEEEEecCCCCCC----------cceEEEEeCCCCCcceEEE-------EeeCCcEEEEeccCCeEEEEe
Confidence 44444455678888888741000 0001111111122345666 4 3455556555678899998
Q ss_pred CCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEe-CC-CcEEEeeeccCCCeeeEeeeeecc
Q 021036 164 GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGK-GS-GSFDLWKCDISCNKFDKVGSYNAH 241 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~-~d-g~i~vw~~~~~~~~~~~~~~~~~h 241 (318)
+........+... ......|+++ |.+..|+.+. .. +.|.+++++-...+ .+. ...
T Consensus 482 ~dg~~~~~l~~~~--------------~~~P~giavD-----p~~g~ly~td~~~~~~I~~~~~dG~~~~--~l~--~~~ 538 (699)
T 1n7d_A 482 TKGVKRKTLFREQ--------------GSKPRAIVVD-----PVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLV--TEN 538 (699)
T ss_dssp SSSCCEEEECCCS--------------SCCCCCEECC-----SSSSCCEECCCSSSCCEEBCCSSSCCCC--EES--CSS
T ss_pred cCCCceEEEEeCC--------------CCCcceEEEc-----cCCCcEEEcccCCCCeEEEEeCCCCCee--EEE--eCC
Confidence 8754332222111 1134677887 6544444443 23 67877744322211 111 112
Q ss_pred cCceeEEEEcCCCC-EEEEecCCCcEEEEEecCCcee
Q 021036 242 DQVVTGLAWAFDGC-CLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 242 ~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
-.....|+|+|++. ++++-+..+.|..+++.+....
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 575 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence 23457899999755 4455566778999998764433
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.49 E-value=0.035 Score=50.14 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=22.8
Q ss_pred cEEEEEeCCCcEEEEECCCcceeeeec
Q 021036 148 VLLVTGSSDGSVRIWDGYIQELQKSAE 174 (318)
Q Consensus 148 ~~l~s~~~d~~v~iwd~~~~~~~~~~~ 174 (318)
..++.++.+|.+.++|.++|+.+....
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeeccc
Confidence 567788999999999999998876654
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.46 E-value=0.027 Score=44.73 Aligned_cols=156 Identities=9% Similarity=0.017 Sum_probs=85.8
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEe-ee--ccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEE
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIG-LF--QAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRI 161 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~~--~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~i 161 (318)
.++++.-.++.+.++++........ ..... .+ .........|+| .+.++.|.++.......+
T Consensus 82 ~~~vs~E~~~~l~~~~v~~~~~i~~--------~~~~~~~~~~~~~N~g~EGLA~-------d~~~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 82 QFVISDERDYAIYVISLTPNSEVKI--------LKKIKIPLQESPTNCGFEGLAY-------SRQDHTFWFFKEKNPIEV 146 (255)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEE--------EEEEECCCSSCCCSSCCEEEEE-------ETTTTEEEEEEESSSEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCeeee--------eeeeccccccccccCCcceEEE-------eCCCCEEEEEECcCCceE
Confidence 7767766778899998875432100 01111 01 123455789999 777766666665555555
Q ss_pred EECCC---cceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee
Q 021036 162 WDGYI---QELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY 238 (318)
Q Consensus 162 wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 238 (318)
|.+.. ...+..+.... +. .......+..++++ |..+.+++....+..+..+ |.... ......+
T Consensus 147 ~~~~g~~~~~~l~i~~~~~--~~-----~~~~~~d~S~l~~d----p~tg~lliLS~~s~~L~~~--d~~g~-~~~~~~L 212 (255)
T 3qqz_A 147 YKVNGLLSSNELHISKDKA--LQ-----RQFTLDDVSGAEFN----QQKNTLLVLSHESRALQEV--TLVGE-VIGEMSL 212 (255)
T ss_dssp EEEESTTCSSCCEEEECHH--HH-----HTCCSSCCCEEEEE----TTTTEEEEEETTTTEEEEE--CTTCC-EEEEEEC
T ss_pred EEEcccccCCceeeecchh--hc-----cccccCCceeEEEc----CCCCeEEEEECCCCeEEEE--cCCCC-EEEEEEc
Confidence 55541 11111111000 00 00112356889999 4567777777777878887 54443 2233344
Q ss_pred ec-c------cCceeEEEEcCCCCEEEEecCCCcEEEEE
Q 021036 239 NA-H------DQVVTGLAWAFDGCCLYSCSQDNFVRSWI 270 (318)
Q Consensus 239 ~~-h------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 270 (318)
.. . -.....|+|+++|++.++ ++-+.++.|.
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 32 1 125689999999985444 6666666664
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.45 E-value=0.034 Score=45.78 Aligned_cols=165 Identities=7% Similarity=-0.066 Sum_probs=92.6
Q ss_pred CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-CcEEEEEeCCCcEEEEECCCc---ce
Q 021036 94 GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP-QVLLVTGSSDGSVRIWDGYIQ---EL 169 (318)
Q Consensus 94 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~---~~ 169 (318)
..|+..++.+.+. ...+. .......++| .+. +.++++-...+.|..+++... ..
T Consensus 10 ~~I~~i~~~~~~~--------------~~~~~-~~~~p~g~~~-------d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 10 HEVRKMTLDRSEY--------------TSLIP-NLRNVVALDT-------EVASNRIYWSDLSQRMICSTQLDRAHGVSS 67 (316)
T ss_dssp SSEEEEETTSCCC--------------EEEEC-SCSSEEEEEE-------ETTTTEEEEEETTTTEEEEEEC--------
T ss_pred CeEEEEECCCcce--------------Eehhc-CCCceEEEEE-------EeCCCEEEEEECCCCcEEEEECCCCCCCcc
Confidence 4688889887542 12222 2446788999 554 455566666789999998751 11
Q ss_pred eeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEE
Q 021036 170 QKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGL 248 (318)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~ 248 (318)
...+.. ........++++ + .++++++-...+.|.+++.+ ......+ ..........+
T Consensus 68 ~~~~~~-------------~~~~~p~glavd-----~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~--~~~~~~~P~~i 125 (316)
T 1ijq_A 68 YDTVIS-------------RDIQAPDGLAVD-----WIHSNIYWTDSVLGTVSVADTK--GVKRKTL--FRENGSKPRAI 125 (316)
T ss_dssp CEEEEC-------------SSCSCCCEEEEE-----TTTTEEEEEETTTTEEEEEETT--SSSEEEE--EECTTCCEEEE
T ss_pred cEEEEe-------------CCCCCcCEEEEe-----ecCCeEEEEECCCCEEEEEeCC--CCceEEE--EECCCCCcceE
Confidence 111110 011244678887 5 45666666678889998543 3321122 22233456899
Q ss_pred EEcCCCCEEEEecC-C-CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 249 AWAFDGCCLYSCSQ-D-NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 249 ~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+++|.+..|+.+.. . +.|...++.+.....+... .. ...++++++|++..|..+
T Consensus 126 avdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~-~~-------------~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-NI-------------QWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS-SC-------------SCEEEEEEETTTTEEEEE
T ss_pred EeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC-CC-------------CCceEEEEeccCCEEEEE
Confidence 99997665544433 2 6788888765443322211 11 145788888876665544
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.44 E-value=0.048 Score=47.17 Aligned_cols=155 Identities=5% Similarity=0.006 Sum_probs=85.5
Q ss_pred ccccccCCCCC---ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcE
Q 021036 73 YPVPQNGSSNW---FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 73 ~~v~~~~~s~~---~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
.....++++++ +.++++ ...+.|+.++..++. +..+.........+++ .++|++
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~---------------v~~~~~~~~~P~giav-------d~dG~l 195 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQY---------------VDIKTTNIGQCADVNF-------TLNGDM 195 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTE---------------EEEECCCCSCEEEEEE-------CTTCCE
T ss_pred CCCceEEEccccCCCEEEEE-eCCCCEEEEECCCCE---------------EEEeecCCCCccEEEE-------CCCCCE
Confidence 34456677763 454444 333889999987643 2233334456789999 888885
Q ss_pred EEEEeCC---Cc-EEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEee
Q 021036 150 LVTGSSD---GS-VRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWK 224 (318)
Q Consensus 150 l~s~~~d---~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~ 224 (318)
+++.... .. +...+...+ .... .. .........++++ | ++.++++-..++.|+.+
T Consensus 196 yVad~~~~~~~~gv~~~~~~~~-~~~~------------~~-~~~~~~P~giavd-----~~~G~lyv~d~~~~~V~~~- 255 (433)
T 4hw6_A 196 VVVDDQSSDTNTGIYLFTRASG-FTER------------LS-LCNARGAKTCAVH-----PQNGKIYYTRYHHAMISSY- 255 (433)
T ss_dssp EEEECCSCTTSEEEEEECGGGT-TCCE------------EE-EEECSSBCCCEEC-----TTTCCEEECBTTCSEEEEE-
T ss_pred EEEcCCCCcccceEEEEECCCC-eecc------------cc-ccccCCCCEEEEe-----CCCCeEEEEECCCCEEEEE-
Confidence 5544321 11 222222111 1000 00 0012234567888 7 67766666677888887
Q ss_pred eccCCCee-eEeeeeecccCceeEEEEcCCCCE-EEEecCCCcEEEEEec
Q 021036 225 CDISCNKF-DKVGSYNAHDQVVTGLAWAFDGCC-LYSCSQDNFVRSWIFH 272 (318)
Q Consensus 225 ~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~ 272 (318)
+..++.. ..+.... ....-..++|+|++++ +++-...+.|+.++..
T Consensus 256 -d~~~g~~~~~~~~~~-~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 256 -DPATGTLTEEEVMMD-TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp -CTTTCCEEEEEEECS-CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred -ECCCCeEEEEEeccC-CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 5554442 1222111 1222346999999984 4555567889998875
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.44 E-value=0.045 Score=46.78 Aligned_cols=166 Identities=6% Similarity=-0.083 Sum_probs=94.5
Q ss_pred CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcc---
Q 021036 93 SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQE--- 168 (318)
Q Consensus 93 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~--- 168 (318)
...|+..++...+. ..+......+..|+| .+ ++.++.+-...+.|+.+++....
T Consensus 91 ~~~I~~i~l~~~~~---------------~~~~~~~~~~~~l~~-------d~~~~~lywsD~~~~~I~~~~~~g~~~~~ 148 (400)
T 3p5b_L 91 RHEVRKMTLDRSEY---------------TSLIPNLRNVVALDT-------EVASNRIYWSDLSQRMICSTQLDRAHGVS 148 (400)
T ss_dssp TTEEEEECTTSCSC---------------EEEECSCSCEEEEEE-------ETTTTEEEEEETTTTEEEEEEC------C
T ss_pred cceeEEEccCCcce---------------eEeccccCcceEEee-------eeccCceEEEecCCCeEEEEEcccCCCCC
Confidence 36788888876431 112233456789999 54 45555555567888888886522
Q ss_pred eeeeecccccccccceeeeeecccceeEEEEeeccCCC-CceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeE
Q 021036 169 LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSP-RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTG 247 (318)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~ 247 (318)
....+. .........++++ + .++++++-...+.|.+. ++....... .+.........
T Consensus 149 ~~~~~~-------------~~~~~~p~glavD-----~~~~~lY~~d~~~~~I~~~--~~~g~~~~~--l~~~~~~~P~~ 206 (400)
T 3p5b_L 149 SYDTVI-------------SRDIQAPDGLAVD-----WIHSNIYWTDSVLGTVSVA--DTKGVKRKT--LFRENGSKPRA 206 (400)
T ss_dssp CCEEEE-------------CSSCSCEEEEEEE-----TTTTEEEEEETTTTEEEEE--CTTTCSEEE--EEECSSCCEEE
T ss_pred cceEEE-------------eCCCCCcccEEEE-----ecCCceEEEECCCCeEEEE--eCCCCceEE--EEeCCCCCcce
Confidence 111111 1111245688888 5 56666676678888887 444433212 12223345789
Q ss_pred EEEcCCCCEEEEec--CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 248 LAWAFDGCCLYSCS--QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 248 ~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
++++|.+.+|+... ..+.|...++.+.....+.... . ...++|+++|++..|..+
T Consensus 207 iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~-l-------------~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 207 IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN-I-------------QWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp EEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS-C-------------SCEEEEEEETTTTEEEEE
T ss_pred EEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC-C-------------CceEEEEEEeCCCEEEEE
Confidence 99999766555443 2477888888765443332111 1 145788888876666544
No 285
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.43 E-value=0.051 Score=49.36 Aligned_cols=194 Identities=9% Similarity=-0.034 Sum_probs=103.2
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccEEEEecCCCcEE
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSILAVGGRSGKVS 97 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~ 97 (318)
.|++.=.....|++.++........+...... ....++|++.. +.++++-...+.|.
T Consensus 9 ~~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~------~~~~ld~~~~~-----------------~~ly~sD~~~~~I~ 65 (619)
T 3s94_A 9 APLLLYANRRDLRLVDATNGKENATIVVGGLE------DAAAVDFVFSH-----------------GLIYWSDVSEEAIK 65 (619)
T ss_dssp -CCEEEECSSBEEEECCC---------CBCCS------CEEEEEEETTT-----------------TEEEEEETTTTEEE
T ss_pred CceEEEeccccEEEEeCCCCcceEEEEEcCCC------ceEEEEEEeCC-----------------CEEEEEECCCCeEE
Confidence 35666777888999988764311112111111 12337777766 34555555677888
Q ss_pred EEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeeeeccc
Q 021036 98 LWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKSAEAH 176 (318)
Q Consensus 98 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 176 (318)
.++.+.... ....+.........+++ .. .++++++-...+.|.+.++........+...
T Consensus 66 r~~~~g~~~-------------~~~v~~~~~~~P~GlAv-------D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~ 125 (619)
T 3s94_A 66 RTEFNKTES-------------VQNVVVSGLLSPDGLAC-------DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQE 125 (619)
T ss_dssp EEEC------------------CEEEECSSCSCEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred EEEccCCCc-------------eEEEEeCCCCCcCeEEE-------EecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCC
Confidence 888865310 11122222246788888 55 4555666666789999998754322222111
Q ss_pred ccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEe-CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCC
Q 021036 177 CVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGK-GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDG 254 (318)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 254 (318)
......|+++ |. |.++++-- ..+.|... ++.......+. ...-.....+++++++
T Consensus 126 --------------l~~P~~Iavd-----p~~g~ly~tD~g~~~~I~r~--~~dG~~~~~l~--~~~~~~P~Glald~~~ 182 (619)
T 3s94_A 126 --------------LDQPRAIALD-----PSSGFMYWTDWGEVPKIERA--GMDGSSRFIII--NSEIYWPNGLTLDYEE 182 (619)
T ss_dssp --------------CSCCCCEEEE-----TTTTEEEEEECSSSCEEEEE--ETTSCSCEEEE--CSSCSSEEEEEEETTT
T ss_pred --------------CCCCceEEEe-----cCCCeEEEeccCCCCEEEEE--ECCCCceEEEE--eCCCCCCcEEEEEccC
Confidence 1245688998 65 44444432 23556555 33333211221 1223456899999976
Q ss_pred CEEEEe-cCCCcEEEEEecCCcee
Q 021036 255 CCLYSC-SQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 255 ~~l~s~-~~d~~v~iwd~~~~~~~ 277 (318)
..|+.+ ...+.|..+|+.+....
T Consensus 183 ~~LY~aD~~~~~I~~~~~dG~~~~ 206 (619)
T 3s94_A 183 QKLYWADAKLNFIHKSNLDGTNRQ 206 (619)
T ss_dssp TEEEEEETTTCCEEEESSSCCEEC
T ss_pred CEEEEEeCCCCeEEEecCCCCccE
Confidence 655444 55678888888764443
No 286
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.26 E-value=0.055 Score=43.99 Aligned_cols=152 Identities=16% Similarity=0.133 Sum_probs=81.3
Q ss_pred ccEEEEecCCC-----cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC--
Q 021036 84 FSILAVGGRSG-----KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD-- 156 (318)
Q Consensus 84 ~~~l~~g~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d-- 156 (318)
+++++.|+.++ .+.+||..+.+. ..+..+......-..+.+ ++++++.|+.+
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W------------~~~~~~p~~r~~~~~~~~---------~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQW------------SMLGDMQTAREGAGLVVA---------SGVIYCLGGYDGL 171 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEE------------EEEEECSSCCBSCEEEEE---------TTEEEEECCBCSS
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeE------------EECCCCCCCcccceEEEE---------CCEEEEECCCCCC
Confidence 46777776543 577888876552 222222211111122222 56677777754
Q ss_pred ---CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC-----CcEEEeeeccC
Q 021036 157 ---GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS-----GSFDLWKCDIS 228 (318)
Q Consensus 157 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d-----g~i~vw~~~~~ 228 (318)
..+.+||+.+.+-...-.... ...-..+.. -++.+++.|+.+ ..+.+| |..
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p~-------------~r~~~~~~~------~~~~i~v~GG~~~~~~~~~v~~y--d~~ 230 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMAT-------------KRSGAGVAL------LNDHIYVVGGFDGTAHLSSVEAY--NIR 230 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSS-------------CCBSCEEEE------ETTEEEEECCBCSSSBCCCEEEE--ETT
T ss_pred cccceEEEEeCCCCcEEeCCCCCc-------------ccccceEEE------ECCEEEEEeCCCCCcccceEEEE--eCC
Confidence 458888887664332211100 001112222 356788888764 356777 777
Q ss_pred CCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCceeee
Q 021036 229 CNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSLSQV 279 (318)
Q Consensus 229 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~ 279 (318)
+.++..+..+.........+.+ ++++++.|+.+ ..+.+||+.++....+
T Consensus 231 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 231 TDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 8887766544322222222222 56777777765 4578888887666544
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.18 E-value=0.076 Score=44.11 Aligned_cols=197 Identities=12% Similarity=0.105 Sum_probs=107.5
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchhccccccccceeeeecccccCCCCcccccccCCCCCccE-EEEecC--
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQYASRSAMLHSLAVAWSPVLRLSSKKYPVPQNGSSNWFSI-LAVGGR-- 92 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~v~~~~~s~~~~~-l~~g~~-- 92 (318)
..+.++...+.+.+.++|+ +++.++.+.... -.. +..-|...+.+... .+ +++.-.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~---~nn------VD~r~~~~l~g~~~-----------dla~as~R~~~ 97 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGK---LNN------VDIRYDFPLNGKKV-----------DIAAASNRSEG 97 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSC---EEE------EEEEEEEEETTEEE-----------EEEEEEECSTT
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCC---ccc------EEEecccccCCceE-----------eEEEEeCCCCC
Confidence 3444677778889999999 787777664311 111 22222110000000 13 333334
Q ss_pred CCcEEEEEccCCccccccccccCCceeEEeeec-------cccccEEEEEeeeecCCCCCCC-cEEEEEeCCCcEEEEEC
Q 021036 93 SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ-------AHNSWITSISLAVLSSDSSNPQ-VLLVTGSSDGSVRIWDG 164 (318)
Q Consensus 93 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~p~~~~~~~~~-~~l~s~~~d~~v~iwd~ 164 (318)
+++|.+|++.... ..+..+. .-...+..+++- . +...+ .++++...+|.+..|++
T Consensus 98 ~n~l~vf~iDp~~-------------~~l~~i~~~~~pv~t~~~~pyGlcly--~--~~~~g~~yafV~~k~G~~~q~~l 160 (355)
T 3amr_A 98 KNTIEIYAIDGKN-------------GTLQSMTDPDHPIATAINEVYGFTLY--H--SQKTGKYYAMVTGKEGEFEQYEL 160 (355)
T ss_dssp CCEEEEEEECTTT-------------CCEEECSCTTSCEECCCSSCCCEEEE--E--CTTTCCEEEEEECSSSEEEEEEE
T ss_pred CCeEEEEEECCCC-------------CceeeccccccCcCCCCCCeeEEEEE--e--cCCCCcEEEEEECCCCeEEEEEE
Confidence 5789999874211 0112221 111344555541 0 02234 36888888999999988
Q ss_pred C---Cc----ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccC--CC-eeeE
Q 021036 165 Y---IQ----ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDIS--CN-KFDK 234 (318)
Q Consensus 165 ~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~--~~-~~~~ 234 (318)
. .+ +.+..+... ..+..+.+. +....|+.+-.+.- ||.++.+ .. +...
T Consensus 161 ~~~~~g~~~~~lVR~f~lg---------------sq~EgcvvD-----d~~g~Lyv~eEd~G--Iw~~da~p~~~~~~~~ 218 (355)
T 3amr_A 161 KADKNGYISGKKVRAFKMN---------------SQTEGMAAD-----DEYGRLYIAEEDEA--IWKFSAEPDGGSNGTV 218 (355)
T ss_dssp EECTTSCEEEEEEEEEECS---------------SCEEEEEEE-----TTTTEEEEEETTTE--EEEEECSTTSCSCCEE
T ss_pred EeCCCCcccceEEEEecCC---------------CCcceEEEc-----CCCCeEEEecccce--EEEEeCCcCCCCCceE
Confidence 3 22 333444322 256788888 77888888888755 5555533 21 1224
Q ss_pred eeeee-c-ccCceeEEEE--cCCCC-EEEEec-CCCcEEEEEec
Q 021036 235 VGSYN-A-HDQVVTGLAW--AFDGC-CLYSCS-QDNFVRSWIFH 272 (318)
Q Consensus 235 ~~~~~-~-h~~~v~~~~~--~~~~~-~l~s~~-~d~~v~iwd~~ 272 (318)
+..+. + -...+..|+. .++++ +|++++ .+.+..+||..
T Consensus 219 v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 219 IDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 44332 2 2246888887 45555 555444 67799999996
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.18 E-value=0.02 Score=47.08 Aligned_cols=160 Identities=16% Similarity=0.091 Sum_probs=89.7
Q ss_pred cccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCcceeee-ecccccccccceeeeeecccceeEEEE---eec
Q 021036 128 NSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQKS-AEAHCVPFSLLKEVVTVNTVPISVLSL---ILP 202 (318)
Q Consensus 128 ~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~ 202 (318)
...-.+++| .. ++.++++.-..++|..||...+..... +..-..+. .....+..|.+ .
T Consensus 12 ~~yPE~~~w-------d~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g--------~~~~~~sGl~~~~~D-- 74 (334)
T 2p9w_A 12 NLTPEDTIY-------DRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNG--------DGEQQMSGLSLLTHD-- 74 (334)
T ss_dssp TCCCSCEEE-------ETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSS--------CCSEEEEEEEESSSS--
T ss_pred ccCCcCccC-------cCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccC--------CCcceeeEEEEeccC--
Confidence 334456788 44 455555555799999999875543332 11100000 00113467888 6
Q ss_pred cCCCCceEEEEEe-------------CCCcEEEeeeccC-CCeeeEeeeeeccc-----------CceeEEEEcCCCCEE
Q 021036 203 VQSPRLMLLAVGK-------------GSGSFDLWKCDIS-CNKFDKVGSYNAHD-----------QVVTGLAWAFDGCCL 257 (318)
Q Consensus 203 ~~~~~~~~l~~~~-------------~dg~i~vw~~~~~-~~~~~~~~~~~~h~-----------~~v~~~~~~~~~~~l 257 (318)
|++.++++.. .+..+..||++.. +++......+.... .....++..++|+..
T Consensus 75 ---~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaY 151 (334)
T 2p9w_A 75 ---NSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSY 151 (334)
T ss_dssp ---SCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEE
T ss_pred ---CCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEE
Confidence 6777777644 2566888844310 33321222222111 247889999999988
Q ss_pred EEecCC-CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 258 YSCSQD-NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 258 ~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
++++.. +.|...+..+............ .......++++++|+|..|++.
T Consensus 152 Vt~s~~~~~I~rV~pdG~~~~~~~~~~~~---------~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 152 VAFALGMPAIARVSADGKTVSTFAWESGN---------GGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp EEEEESSCEEEEECTTSCCEEEEEECCCC---------SSSCCSCSEEEEETTTTEEEEE
T ss_pred EeCCCCCCeEEEEeCCCCEEeeeeecCCC---------cccccCcceEEEeCCCCEEEEE
Confidence 888887 8877776655433322111100 0011246799999999887764
No 289
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.13 E-value=0.067 Score=43.52 Aligned_cols=153 Identities=17% Similarity=0.163 Sum_probs=81.3
Q ss_pred ccEEEEecCCC-----cEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCC-
Q 021036 84 FSILAVGGRSG-----KVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDG- 157 (318)
Q Consensus 84 ~~~l~~g~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~- 157 (318)
+.+++.|+.++ .+.+||..+.+. ..+..+......-..+.+ ++.+++.|+.++
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W------------~~~~~~p~~r~~~~~~~~---------~~~iyv~GG~~~~ 120 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQW------------TSVANMRDRRSTLGAAVL---------NGLLYAVGGFDGS 120 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEE------------EEECCCSSCCBSCEEEEE---------TTEEEEEEEECSS
T ss_pred CEEEEEeCcCCCccccceEEECCCCCce------------eeCCCCCccccceEEEEE---------CCEEEEEcCCCCC
Confidence 46777777543 477888877552 222222221112222233 456777777553
Q ss_pred ----cEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC-------CcEEEeeec
Q 021036 158 ----SVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS-------GSFDLWKCD 226 (318)
Q Consensus 158 ----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d-------g~i~vw~~~ 226 (318)
.+.+||+.+.+-...-..... . .-..++. -++.+++.|+.+ ..+.+| |
T Consensus 121 ~~~~~~~~~d~~~~~W~~~~~~p~~------------r-~~~~~~~------~~~~iyv~GG~~~~~~~~~~~~~~y--d 179 (302)
T 2xn4_A 121 TGLSSVEAYNIKSNEWFHVAPMNTR------------R-SSVGVGV------VGGLLYAVGGYDVASRQCLSTVECY--N 179 (302)
T ss_dssp CEEEEEEEEETTTTEEEEECCCSSC------------C-BSCEEEE------ETTEEEEECCEETTTTEECCCEEEE--E
T ss_pred ccCceEEEEeCCCCeEeecCCCCCc------------c-cCceEEE------ECCEEEEEeCCCCCCCccccEEEEE--e
Confidence 477788776543322111000 0 1112223 256777777643 346666 7
Q ss_pred cCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCceeeee
Q 021036 227 ISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 227 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~ 280 (318)
..+.++..+..+.........+.+ ++++++.|+.+ ..+.+||+.+.....+.
T Consensus 180 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 180 ATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 777777666544322222222222 56777777764 46889999887766554
No 290
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.12 E-value=0.078 Score=43.20 Aligned_cols=153 Identities=8% Similarity=0.039 Sum_probs=81.6
Q ss_pred ccEEEEecCC----CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC---
Q 021036 84 FSILAVGGRS----GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD--- 156 (318)
Q Consensus 84 ~~~l~~g~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d--- 156 (318)
+.+++.|+.+ ..+.+||..+++. ..+..+......-..+.+ ++++++.|+.+
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W------------~~~~~~p~~r~~~~~~~~---------~~~iyv~GG~~~~~ 114 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSW------------YSKLGPPTPRDSLAACAA---------EGKIYTSGGSEVGN 114 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEE------------EEEECCSSCCBSCEEEEE---------TTEEEEECCBBTTB
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeE------------EECCCCCccccceeEEEE---------CCEEEEECCCCCCC
Confidence 3677777754 5677888877652 222222211112222223 56677777765
Q ss_pred ---CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC---------CCcEEEee
Q 021036 157 ---GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG---------SGSFDLWK 224 (318)
Q Consensus 157 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~---------dg~i~vw~ 224 (318)
..+.+||..+.+-...-..... . .-..++. -++++++.|+. -..+.+|
T Consensus 115 ~~~~~~~~~d~~~~~W~~~~~~p~~------------r-~~~~~~~------~~~~iyv~GG~~~~~~~~~~~~~~~~y- 174 (306)
T 3ii7_A 115 SALYLFECYDTRTESWHTKPSMLTQ------------R-CSHGMVE------ANGLIYVCGGSLGNNVSGRVLNSCEVY- 174 (306)
T ss_dssp SCCCCEEEEETTTTEEEEECCCSSC------------C-BSCEEEE------ETTEEEEECCEESCTTTCEECCCEEEE-
T ss_pred cEeeeEEEEeCCCCceEeCCCCcCC------------c-ceeEEEE------ECCEEEEECCCCCCCCcccccceEEEe-
Confidence 4688888887643322111000 0 1112222 35677777763 2346676
Q ss_pred eccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCceeeee
Q 021036 225 CDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 225 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~ 280 (318)
|..+.++..+..+......-..+.+ ++++++.|+.+ ..+.+||+.++....+.
T Consensus 175 -d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 175 -DPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp -ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred -CCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 7777777666544322222222222 56677777654 46889999887766554
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.10 E-value=0.093 Score=43.59 Aligned_cols=154 Identities=11% Similarity=0.119 Sum_probs=90.6
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCc---EEEEEe-C--CCc
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQV---LLVTGS-S--DGS 158 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~---~l~s~~-~--d~~ 158 (318)
.+++...+.+-+.+||+ ++ +.++.+.. +.++.+..-|-. .-.|+ ++++.. . +++
T Consensus 41 s~ii~t~k~~gL~Vydl-~G--------------~~l~~~~~--g~~nnVD~r~~~---~l~g~~~dla~as~R~~~~n~ 100 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DG--------------KMLHSYNT--GKLNNVDIRYDF---PLNGKKVDIAAASNRSEGKNT 100 (355)
T ss_dssp CEEEEEETTTEEEEEET-TS--------------CEEEEECC--SCEEEEEEEEEE---EETTEEEEEEEEEECSTTCCE
T ss_pred cEEEEEcCCCCEEEEcC-CC--------------cEEEEccC--CCcccEEEeccc---ccCCceEeEEEEeCCCCCCCe
Confidence 56676677888999999 43 34555543 456666662211 11222 233333 3 579
Q ss_pred EEEEECC--CcceeeeecccccccccceeeeeecccceeEEEE--eeccCCC-Cce-EEEEEeCCCcEEEeeecc-CCC-
Q 021036 159 VRIWDGY--IQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSL--ILPVQSP-RLM-LLAVGKGSGSFDLWKCDI-SCN- 230 (318)
Q Consensus 159 v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~~-~~~-~l~~~~~dg~i~vw~~~~-~~~- 230 (318)
|.+|++. +++ +..+.....++ ......++.+++ + + .+. ++++...+|.+..|++.. ..+
T Consensus 101 l~vf~iDp~~~~-l~~i~~~~~pv-------~t~~~~pyGlcly~~-----~~~g~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 101 IEIYAIDGKNGT-LQSMTDPDHPI-------ATAINEVYGFTLYHS-----QKTGKYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp EEEEEECTTTCC-EEECSCTTSCE-------ECCCSSCCCEEEEEC-----TTTCCEEEEEECSSSEEEEEEEEECTTSC
T ss_pred EEEEEECCCCCc-eeeccccccCc-------CCCCCCeeEEEEEec-----CCCCcEEEEEECCCCeEEEEEEEeCCCCc
Confidence 9999774 332 33331100000 000135566777 5 4 343 678888899999996632 122
Q ss_pred -eeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEec
Q 021036 231 -KFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH 272 (318)
Q Consensus 231 -~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 272 (318)
..+.+.++.. ...+..+..++....|+.+-++.-|..++..
T Consensus 168 ~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 168 ISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 3346677664 4568888999988899999998666666644
No 292
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.03 E-value=0.11 Score=43.40 Aligned_cols=147 Identities=14% Similarity=0.124 Sum_probs=79.1
Q ss_pred CCCCcEEEEEe------------CCCcEEEEECCCcc-eeeeecccccccccceeeeeecccceeEEEEeeccCCCCc--
Q 021036 144 SNPQVLLVTGS------------SDGSVRIWDGYIQE-LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-- 208 (318)
Q Consensus 144 ~~~~~~l~s~~------------~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-- 208 (318)
.++|..+++++ .+|.|.++|..+.. ....+......+ .........+.+..+ .++
T Consensus 58 ~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~-------~~~~f~PhGi~~~~d---~dg~~ 127 (355)
T 3sre_A 58 LPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTL-------DISSFNPHGISTFID---DDNTV 127 (355)
T ss_dssp CTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSC-------CGGGCCEEEEEEEEC---TTCCE
T ss_pred cCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCC-------CcCceeeeeeEEEEC---CCCcE
Confidence 56675555542 68999999987421 122221111000 001123445555411 133
Q ss_pred eEEEEEeC--CCcEEEeeeccCCCeeeEeeeeeccc-CceeEEEEcCCCCEEEEecC-----------------CCcEEE
Q 021036 209 MLLAVGKG--SGSFDLWKCDISCNKFDKVGSYNAHD-QVVTGLAWAFDGCCLYSCSQ-----------------DNFVRS 268 (318)
Q Consensus 209 ~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~-----------------d~~v~i 268 (318)
.++++-.. +..|.+|+++........+.++.+.. .....+.+.++|.+.++... .|.|..
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 34444333 56889998887766655666665432 35688999999987776541 133433
Q ss_pred EEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEEe
Q 021036 269 WIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMVQ 317 (318)
Q Consensus 269 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~~ 317 (318)
+| .+....+... ....++++|+||++.|..+.
T Consensus 208 ~d--~~~~~~~~~~---------------l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 208 YS--PNDVRVVAEG---------------FDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp EC--TTCCEEEEEE---------------ESSEEEEEECTTSSEEEEEE
T ss_pred EE--CCeEEEeecC---------------CcccCcceECCCCCEEEEEe
Confidence 33 3322211111 11448999999998877653
No 293
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.97 E-value=0.067 Score=48.31 Aligned_cols=159 Identities=17% Similarity=0.060 Sum_probs=86.5
Q ss_pred EEEecCCCcEEEEEccCCccccccccccCCceeEEeeec--ccc--ccEEEEEeeeecCCCCCCCcEEEEEe------CC
Q 021036 87 LAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ--AHN--SWITSISLAVLSSDSSNPQVLLVTGS------SD 156 (318)
Q Consensus 87 l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~--~~v~~~~~~p~~~~~~~~~~~l~s~~------~d 156 (318)
|+.++.|+.|.-+|.++|+.+ -... .+. ..+.+ .|. -.++ .++.++ .+
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~--------------W~~~~~~~~~~~~~~s---sP~----v~~g-~V~vg~~g~e~g~~ 181 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETV--------------WKVENSDIKVGSTLTI---APY----VVKD-KVIIGSSGAELGVR 181 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEE--------------EEEECCCGGGTCBCCS---CCE----EETT-EEEECCBCGGGTCC
T ss_pred EEEEcCCCEEEEEECCCCCEE--------------EeecCCCCCccceeec---CCE----EECC-EEEEEecccccCCC
Confidence 788888999999999987632 1111 111 01111 000 0134 455554 38
Q ss_pred CcEEEEECCCcceeeeecccccccccc------------------------eeeeeecccceeEEEEeeccCCCCceEEE
Q 021036 157 GSVRIWDGYIQELQKSAEAHCVPFSLL------------------------KEVVTVNTVPISVLSLILPVQSPRLMLLA 212 (318)
Q Consensus 157 ~~v~iwd~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~v~~l~~~~~~~~~~~~~l~ 212 (318)
+.|+.+|..+|+.+..+.......... ..........-..+++. +...+++
T Consensus 182 g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d-----~~~g~vy 256 (599)
T 1w6s_A 182 GYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD-----PGTNLIY 256 (599)
T ss_dssp CEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE-----TTTTEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEe-----CCCCEEE
Confidence 999999999999887765432110000 00000000001134555 5666777
Q ss_pred EEeCCC----------------cEEEeeeccCCCeeeEeeeeec--cc--------CceeEEEEc-CCC---CEEEEecC
Q 021036 213 VGKGSG----------------SFDLWKCDISCNKFDKVGSYNA--HD--------QVVTGLAWA-FDG---CCLYSCSQ 262 (318)
Q Consensus 213 ~~~~dg----------------~i~vw~~~~~~~~~~~~~~~~~--h~--------~~v~~~~~~-~~~---~~l~s~~~ 262 (318)
.+..++ .|..+ |..+++ .+..++. |. .++. +... .+| ..++.++.
T Consensus 257 ~g~g~~~p~~~~~r~gd~~y~~sv~Al--d~~TG~--~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 257 FGTGNPAPWNETMRPGDNKWTMTIFGR--DADTGE--AKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp EECCCCSCSCGGGSCSCCTTSSEEEEE--ETTTCC--EEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECT
T ss_pred EeCCCCccccCcccCCCccccceEEEE--eCCCCc--eeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECC
Confidence 766553 55555 777777 3333332 22 1121 2222 467 46777899
Q ss_pred CCcEEEEEecCCcee
Q 021036 263 DNFVRSWIFHGNSLS 277 (318)
Q Consensus 263 d~~v~iwd~~~~~~~ 277 (318)
+|.++++|..+++..
T Consensus 332 ~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 332 NGIVYTLDRTDGALV 346 (599)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CcEEEEEECCCCCEe
Confidence 999999999887754
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.96 E-value=0.021 Score=52.69 Aligned_cols=157 Identities=13% Similarity=-0.108 Sum_probs=81.3
Q ss_pred ccCCCC-CccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe-
Q 021036 77 QNGSSN-WFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS- 154 (318)
Q Consensus 77 ~~~~s~-~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~- 154 (318)
.++++. .++++++-...+.|.+.+..... ....+.........|++ .+.+.+|+.+.
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~--------------~~~l~~~~~~~P~giav-------Dp~~g~ly~td~ 515 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK--------------RKTLFREQGSKPRAIVV-------DPVHGFMYWTDW 515 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCC--------------EEEECCCSSCCCCCEEC-------CSSSSCCEECCC
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCc--------------eEEEEeCCCCCcceEEE-------ccCCCcEEEccc
Confidence 445543 24566665667889988887532 11112222233466777 55443344333
Q ss_pred CC-CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCee
Q 021036 155 SD-GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKF 232 (318)
Q Consensus 155 ~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~ 232 (318)
.. +.|...++.... ...+... .....+.|+++ |++ .++++-...+.|..++++ ....
T Consensus 516 ~~~~~I~~~~~dG~~-~~~l~~~-------------~l~~PnGlavd-----~~~~~LY~aD~~~~~I~~~d~d--G~~~ 574 (699)
T 1n7d_A 516 GTPAKIKKGGLNGVD-IYSLVTE-------------NIQWPNGITLD-----LLSGRLYWVDSKLHSISSIDVN--GGNR 574 (699)
T ss_dssp SSSCCEEBCCSSSCC-CCEESCS-------------SCSSCCCEEEC-----TTTCCEEEEETTTTEEEEECSS--SSCC
T ss_pred CCCCeEEEEeCCCCC-eeEEEeC-------------CCCCccEEEEe-----ccCCEEEEEecCCCeEEEEccC--CCce
Confidence 22 677777665322 1111100 11245678998 664 455555567788888554 3222
Q ss_pred eEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCce
Q 021036 233 DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 233 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 276 (318)
+.+............|++..+ .++++....+.|..++..++..
T Consensus 575 ~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 575 KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEE
T ss_pred EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCc
Confidence 222221111223345666544 4555556678899999765544
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.96 E-value=0.13 Score=42.97 Aligned_cols=178 Identities=11% Similarity=0.034 Sum_probs=90.8
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEee----eccccccEEEEEeeeecCCCCCCC--cEEEEEeC--CCcEEEEE
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGL----FQAHNSWITSISLAVLSSDSSNPQ--VLLVTGSS--DGSVRIWD 163 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~~~~~p~~~~~~~~~--~~l~s~~~--d~~v~iwd 163 (318)
.+|.|.++|.++.... .+.+.. +....-....+.+.+- .++ .++++-.. +.++.+|+
T Consensus 81 ~~G~I~~~d~~~~~~~----------~~~l~~~g~~~~~~~f~PhGi~~~~d-----~dg~~~L~Vvnh~~~~s~ielf~ 145 (355)
T 3sre_A 81 KSGKILLMDLNEKEPA----------VSELEIIGNTLDISSFNPHGISTFID-----DDNTVYLLVVNHPGSSSTVEVFK 145 (355)
T ss_dssp -CCEEEEEETTSSSCC----------EEECEEECSSCCGGGCCEEEEEEEEC-----TTCCEEEEEEECSTTCCEEEEEE
T ss_pred CCCeEEEEecCCCCCc----------eEEEEccCCCCCcCceeeeeeEEEEC-----CCCcEEEEEEECCCCCCeEEEEE
Confidence 6899999998743210 112211 1112235566666211 123 34444333 56788887
Q ss_pred CCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC---C------------CcEEEeeeccC
Q 021036 164 GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG---S------------GSFDLWKCDIS 228 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~---d------------g~i~vw~~~~~ 228 (318)
+..+.....+-. .+........+.+.+. ++|.+.++... | ..=.+|.++..
T Consensus 146 ~d~~~~~~~~~~---------~~~g~~~~~pND~~v~-----~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 146 FQEEEKSLLHLK---------TIRHKLLPSVNDIVAV-----GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EETTTTEEEEEE---------EECCTTCSSEEEEEEE-----ETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCEEEEEe---------ccccCCCCCCceEEEe-----CCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 764322111100 0000112256888998 88887776541 1 22334433442
Q ss_pred CCeeeEeeeeecccCceeEEEEcCCCCEEEEe-cCCCcEEEEEecC-CceeeeecCCCCCCccccccCCCcceeeeEEEE
Q 021036 229 CNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSC-SQDNFVRSWIFHG-NSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAV 306 (318)
Q Consensus 229 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 306 (318)
+.+. +...-...+.++|+||++.|+.+ +..+.|..|++.. +.+.....-.. .+..-.+++
T Consensus 212 --~~~~---~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~-------------~g~PDGi~v 273 (355)
T 3sre_A 212 --DVRV---VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF-------------DTLVDNISV 273 (355)
T ss_dssp --CCEE---EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC-------------SSEEEEEEE
T ss_pred --eEEE---eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC-------------CCCCceEEE
Confidence 2212 22223456889999999866554 5678999999864 33221110000 124567888
Q ss_pred cC-CCcEEEEE
Q 021036 307 SP-GNLVVAMV 316 (318)
Q Consensus 307 sp-~~~~l~~~ 316 (318)
.+ +|.+.+++
T Consensus 274 D~e~G~lwva~ 284 (355)
T 3sre_A 274 DPVTGDLWVGC 284 (355)
T ss_dssp CTTTCCEEEEE
T ss_pred eCCCCcEEEEe
Confidence 88 58766644
No 296
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.91 E-value=0.12 Score=41.87 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=63.0
Q ss_pred CCcEEEEEeCC-----CcEEEEECCCcc---eeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC
Q 021036 146 PQVLLVTGSSD-----GSVRIWDGYIQE---LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS 217 (318)
Q Consensus 146 ~~~~l~s~~~d-----~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d 217 (318)
++.+++.|+.+ ..+.+||..+.+ -...-..... . .-..++. .++.+++.|+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~------------r-~~~~~~~------~~~~lyv~GG~~ 122 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR------------R-GLAGATT------LGDMIYVSGGFD 122 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC------------C-BSCEEEE------ETTEEEEECCBC
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC------------c-cceeEEE------ECCEEEEEcccC
Confidence 46677777755 468889988765 2222110000 0 1112222 356788887754
Q ss_pred C-----cEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCceeeee
Q 021036 218 G-----SFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 218 g-----~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~ 280 (318)
+ .+.+| |..+.++..+..+......-..+.+ ++++++.|+.+ ..+.+||+.+.....+.
T Consensus 123 ~~~~~~~~~~~--d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 191 (301)
T 2vpj_A 123 GSRRHTSMERY--DPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191 (301)
T ss_dssp SSCBCCEEEEE--ETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC
T ss_pred CCcccceEEEE--cCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCC
Confidence 3 35565 7778887766554322222222222 56777777754 46889998887766553
No 297
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.91 E-value=0.11 Score=46.58 Aligned_cols=72 Identities=17% Similarity=0.094 Sum_probs=43.2
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeec--cccccEEEEEeeeecCCCCCCCcEEEEEeC------
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQ--AHNSWITSISLAVLSSDSSNPQVLLVTGSS------ 155 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~------ 155 (318)
+..++.++.|+.|..+|.++++.. -... .+... ..+.-.|. -.++ .++.++.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~--------------W~~~~~~~~~~-~~~~~~P~----v~~g-~v~vg~~~~~~~~ 174 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKIN--------------WEVEVCDPKVG-STLTQAPF----VAKD-TVLMGCSGAELGV 174 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEE--------------EEEECCCGGGT-CBCCSCCE----EETT-EEEEECBCGGGTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEE--------------EEecCCCCCcc-ceeccCCE----EECC-EEEEEecCCccCC
Confidence 467888888999999999987632 2211 11100 00111000 0133 4555554
Q ss_pred CCcEEEEECCCcceeeeecc
Q 021036 156 DGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 156 d~~v~iwd~~~~~~~~~~~~ 175 (318)
++.|..+|..+|+.+..+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCcEEEEEcc
Confidence 79999999999998877654
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.91 E-value=0.14 Score=42.37 Aligned_cols=149 Identities=10% Similarity=0.060 Sum_probs=77.4
Q ss_pred cccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEE-EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccC
Q 021036 126 AHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRI-WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQ 204 (318)
Q Consensus 126 ~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 204 (318)
.....+..+.+ .+++.+++.+. +|.+.. +|- .++.-..+.. .....+..+.+.
T Consensus 160 ~~~~~~~~~~~-------~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~-------------~~~~~~~~~~~~---- 213 (327)
T 2xbg_A 160 EAIGVMRNLNR-------SPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNR-------------TTSRRLHNMGFT---- 213 (327)
T ss_dssp SCCCCEEEEEE-------CTTSCEEEEET-TSSEEEEECT-TCSSCEEEEC-------------CSSSCEEEEEEC----
T ss_pred CCCcceEEEEE-------cCCCcEEEEEC-CCcEEEEeCC-CCCceeECCC-------------CCCCccceeEEC----
Confidence 34557888999 77777776664 444433 332 1222221111 112356778887
Q ss_pred CCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee-ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCC
Q 021036 205 SPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY-NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPT 283 (318)
Q Consensus 205 ~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 283 (318)
+++.+++.+ .+|.+++.+.| ....+..+..- ..+...+.++.+.+++..++++. ++.| .+....+.........
T Consensus 214 -~~g~~~~~~-~~G~~~~s~~D-~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~ 288 (327)
T 2xbg_A 214 -PDGRLWMIV-NGGKIAFSDPD-NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDV 288 (327)
T ss_dssp -TTSCEEEEE-TTTEEEEEETT-EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGG
T ss_pred -CCCCEEEEe-CCceEEEecCC-CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCcc
Confidence 777766544 57877765211 12222222111 01223578899998887666654 6666 3444444333221110
Q ss_pred CCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 284 NTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 284 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
. .....++++.|.+++++++.|
T Consensus 289 ~-----------~~~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 289 K-----------KVPSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp T-----------TSSSCCCEEEEEETTEEEEEC
T ss_pred C-----------CCCCCeEEEEEECCCceEEEc
Confidence 0 011255788887777777765
No 299
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.89 E-value=0.062 Score=43.70 Aligned_cols=70 Identities=23% Similarity=0.266 Sum_probs=43.7
Q ss_pred CceEEEEEeCCC-----cEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCC-----cEEEEEecCCce
Q 021036 207 RLMLLAVGKGSG-----SFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN-----FVRSWIFHGNSL 276 (318)
Q Consensus 207 ~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~ 276 (318)
++.+++.|+.++ .+.+| |..+.++..+..+.........+. .++++++.|+.++ .+.+||+.+...
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~y--d~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVY--DPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEE--ETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEE--eCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 578888887643 56676 777778776654432221112222 2567777777653 489999988776
Q ss_pred eeee
Q 021036 277 SQVS 280 (318)
Q Consensus 277 ~~~~ 280 (318)
..+.
T Consensus 280 ~~~~ 283 (302)
T 2xn4_A 280 TVVS 283 (302)
T ss_dssp EECS
T ss_pred EECC
Confidence 6553
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.87 E-value=0.11 Score=42.52 Aligned_cols=70 Identities=17% Similarity=0.158 Sum_probs=43.3
Q ss_pred CceEEEEEeCC-----CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCce
Q 021036 207 RLMLLAVGKGS-----GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSL 276 (318)
Q Consensus 207 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~ 276 (318)
++.+++.|+.+ ..+.+| |..+.++..+..+.........+.+ ++++++.|+.+ ..+.+||+.+...
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECY--YPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEE--ETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEE--eCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56777777754 346676 6777777665544322222222333 56677777765 5689999988776
Q ss_pred eeee
Q 021036 277 SQVS 280 (318)
Q Consensus 277 ~~~~ 280 (318)
..+.
T Consensus 244 ~~~~ 247 (308)
T 1zgk_A 244 TFVA 247 (308)
T ss_dssp EECC
T ss_pred EECC
Confidence 6554
No 301
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.80 E-value=0.16 Score=41.65 Aligned_cols=229 Identities=10% Similarity=0.085 Sum_probs=122.6
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchh------c---cccccccceeeeeccccc------CCCC----ccccccc
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQY------A---SRSAMLHSLAVAWSPVLR------LSSK----KYPVPQN 78 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~w~p~~~------~~~~----~~~v~~~ 78 (318)
..+++--...++.|+|+++.+.+........ . .-+.+.......|+-.+. +.+| ..-|...
T Consensus 78 ~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY 157 (365)
T 2xzh_A 78 SKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINY 157 (365)
T ss_dssp SSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEE
T ss_pred ccEEEEecCCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEE
Confidence 3444544578899999999877665544210 0 001112233567754431 2222 1235556
Q ss_pred CCCCCccEEEEec-------CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE
Q 021036 79 GSSNWFSILAVGG-------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV 151 (318)
Q Consensus 79 ~~s~~~~~l~~g~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~ 151 (318)
..+++.++++..+ ..|.+.+|+.+.+ .-+.+.+|.+.-..+.. ..+.....+|+
T Consensus 158 ~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---------------~sQ~ieGhaa~F~~~~~----~g~~~~~~lf~ 218 (365)
T 2xzh_A 158 RTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------------VSQPIEGHAASFAQFKM----EGNAEESTLFC 218 (365)
T ss_dssp EECTTSCEEEEEEEEEETTEEEEEEEEEETTTT---------------EEEEECCSEEEEEEECC----TTCSSCEEEEE
T ss_pred EECCCCCEEEEEeEeccCCccceeEEEEeeccc---------------ccceeeeeeeeeEEEec----CCCCCCceEEE
Confidence 6677777766543 3467888988853 34567788765544444 11112223444
Q ss_pred EEeCC---CcEEEEECCCc-ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 152 TGSSD---GSVRIWDGYIQ-ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 152 s~~~d---~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
-+... +.+.+-++... .....+.... ..+........+.|| ++.++ +.-..++.-+.-|.|++| |+
T Consensus 219 fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~--vdi~fppea~~DFPV-amqvs-----~kygviyviTK~G~ihly--Dl 288 (365)
T 2xzh_A 219 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKA--VDVFFPPEAQNDFPV-AMQIS-----EKHDVVFLITKYGYIHLY--DL 288 (365)
T ss_dssp EEEEETTEEEEEEEECSSCCTTCCCCCCEE--EEECCCTTCTTCCEE-EEEEE-----TTTTEEEEEETTSEEEEE--ET
T ss_pred EEEecCCCcEEEEEEcCCCCCCCCCccccc--ceeeCCccccCCceE-EEEec-----ccCCEEEEEeCCcEEEEE--Ec
Confidence 44432 57888887542 1111111000 000000011233344 67777 677788888899999999 67
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
.++. ++..-+-....|..-+-+....=++.....|.|.--.+....+.
T Consensus 289 eTgt--~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 289 ETGT--CIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp TTCC--EEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred ccCc--EEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 7877 44333334455554444444334555557787777777665543
No 302
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.77 E-value=0.083 Score=44.12 Aligned_cols=74 Identities=9% Similarity=0.081 Sum_probs=37.6
Q ss_pred CceEEEEEeC------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----------------
Q 021036 207 RLMLLAVGKG------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD----------------- 263 (318)
Q Consensus 207 ~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----------------- 263 (318)
++.+++.|+. ...+..|+++..+.++..+..+..........+...++++++.|+.+
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~ 279 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE 279 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence 5677777763 33566776555777776665542221111111222356677777632
Q ss_pred -----CcEEEEEecCCceeeee
Q 021036 264 -----NFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 264 -----~~v~iwd~~~~~~~~~~ 280 (318)
..+.+||+.+.....+.
T Consensus 280 ~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 280 GLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp TCCCEECCEEEECC---CEEEE
T ss_pred cccceeeEEEEecCCCceeeCC
Confidence 25788998877666554
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.12 Score=45.32 Aligned_cols=117 Identities=10% Similarity=0.057 Sum_probs=67.4
Q ss_pred cEEEEEeeeecCCCCC--CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEE-------e
Q 021036 130 WITSISLAVLSSDSSN--PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSL-------I 200 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-------~ 200 (318)
....|+| .| +++++++-...+.|++.|+..+........... .......++| +
T Consensus 140 ~p~~la~-------dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~-----------~~~~p~~ia~~~~~~~~d 201 (496)
T 3kya_A 140 DNGRLAF-------DPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI-----------PTNRIRSIAFNKKIEGYA 201 (496)
T ss_dssp SEEEEEE-------ETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS-----------SCSBEEEEEECCCBTTTB
T ss_pred CCCEEEE-------ccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc-----------ccCCCcEEEEeecccccC
Confidence 3567888 55 244455444456788889887655443332111 1124678899 8
Q ss_pred eccCCCCceEEEEEeCCC-c------EEEeeeccCC-CeeeE---eeeeecccCceeEEEEcCC-CCEEEEecCCCcEEE
Q 021036 201 LPVQSPRLMLLAVGKGSG-S------FDLWKCDISC-NKFDK---VGSYNAHDQVVTGLAWAFD-GCCLYSCSQDNFVRS 268 (318)
Q Consensus 201 ~~~~~~~~~~l~~~~~dg-~------i~vw~~~~~~-~~~~~---~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~i 268 (318)
++++.|+++...+ . |.++ +... +.+.. ...+... .....++++|+ +.++++-..++.|..
T Consensus 202 -----~~G~~lyvad~~~~~~~~~~~V~~i--~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r 273 (496)
T 3kya_A 202 -----DEAEYMIVAIDYDGKGDESPSVYII--KRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFR 273 (496)
T ss_dssp -----CTTCEEEEEECCCTTGGGEEEEEEE--ECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred -----CCCCEEEEEeCCCCCcccCceEEEE--ecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEE
Confidence 8888666666544 2 4454 3222 23210 0112222 23457888995 556667778888999
Q ss_pred EEec
Q 021036 269 WIFH 272 (318)
Q Consensus 269 wd~~ 272 (318)
+|+.
T Consensus 274 ~d~~ 277 (496)
T 3kya_A 274 LDLV 277 (496)
T ss_dssp ECHH
T ss_pred Eecc
Confidence 9997
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.69 E-value=0.29 Score=42.91 Aligned_cols=168 Identities=10% Similarity=-0.054 Sum_probs=85.7
Q ss_pred EEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECC-------Ccceeeeecccccccccceeee-eecccceeEEEEeec
Q 021036 132 TSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGY-------IQELQKSAEAHCVPFSLLKEVV-TVNTVPISVLSLILP 202 (318)
Q Consensus 132 ~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~ 202 (318)
..++. .+ ++.++++-..++.|..+|+. ++..-......... ....+. .......+.|+++
T Consensus 250 ~giav-------dp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g--~~~~l~~~~~~~~p~~ia~~-- 318 (496)
T 3kya_A 250 NGATI-------HPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN--TFKQLFTIADPSWEFQIFIH-- 318 (496)
T ss_dssp CCEEE-------CTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT--TEEEEEECSSSSCCEEEEEC--
T ss_pred eEEEE-------cCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc--ccceeEecCCCCCceEEEEc--
Confidence 46677 55 56666666678889999987 44320000000000 000000 1112345789999
Q ss_pred cCCCCceEEEEE-eCCCcEEEeeeccCCCeeeEeeeeecc---c------------Ccee-EEEEc-------CCCCEEE
Q 021036 203 VQSPRLMLLAVG-KGSGSFDLWKCDISCNKFDKVGSYNAH---D------------QVVT-GLAWA-------FDGCCLY 258 (318)
Q Consensus 203 ~~~~~~~~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~~~h---~------------~~v~-~~~~~-------~~~~~l~ 258 (318)
|+|+.|+.+ .....|+.++.+...+.+.....+.+. . .... .+... ++|.+++
T Consensus 319 ---p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyV 395 (496)
T 3kya_A 319 ---PTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYF 395 (496)
T ss_dssp ---TTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEE
T ss_pred ---CCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEE
Confidence 999854444 567788887666655432111122111 0 1233 34444 4566666
Q ss_pred EecCCCcEEEEEecCCceeeeecCCCC---------CCccccccCCCcceeeeEEEEcCC-CcEEE
Q 021036 259 SCSQDNFVRSWIFHGNSLSQVSIPTNT---------PGLQSCTDLPDAFVSCLGMAVSPG-NLVVA 314 (318)
Q Consensus 259 s~~~d~~v~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~ 314 (318)
+-..+..|+.++ ..+.+.++...... ....+............+|+++++ |.+.+
T Consensus 396 aD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyV 460 (496)
T 3kya_A 396 VDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYV 460 (496)
T ss_dssp EEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEE
T ss_pred EECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEE
Confidence 666778888888 44556555543211 000010011123345689999997 65444
No 305
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.62 E-value=0.025 Score=50.94 Aligned_cols=80 Identities=23% Similarity=0.320 Sum_probs=48.9
Q ss_pred CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEe
Q 021036 156 DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKV 235 (318)
Q Consensus 156 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 235 (318)
+|.|..||+.+++.+....... ++..-... ..+.+++.++.||.++.| |.++++ .+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~---------------~~~~g~~~-----tagglvf~g~~dg~l~A~--D~~tG~--~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL---------------PLWAGVLA-----TAGNLVFTGTGDGYFKAF--DAKSGK--EL 520 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS---------------CCCSCCEE-----ETTTEEEEECTTSEEEEE--ETTTCC--EE
T ss_pred cceEEEEECCCCCEEEEecCCC---------------CCcccceE-----eCCCEEEEECCCCcEEEE--ECCCCC--EE
Confidence 5789999999998877654321 11111111 235667779999999999 777887 56
Q ss_pred eeeecccCc-eeEEEEcCCCC-EEEE
Q 021036 236 GSYNAHDQV-VTGLAWAFDGC-CLYS 259 (318)
Q Consensus 236 ~~~~~h~~~-v~~~~~~~~~~-~l~s 259 (318)
.+++..... ..-+.|..+|+ |+++
T Consensus 521 W~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 521 WKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp EEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EEecCCCCcccCceEEEECCEEEEEE
Confidence 565543221 12256667776 4443
No 306
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.53 E-value=0.24 Score=40.18 Aligned_cols=152 Identities=9% Similarity=-0.021 Sum_probs=81.3
Q ss_pred cEEEEecCC--CcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCC----Cc
Q 021036 85 SILAVGGRS--GKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSD----GS 158 (318)
Q Consensus 85 ~~l~~g~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d----~~ 158 (318)
.+++.|+.+ ..+.+||..+++.. .+..+......-..+.+ ++.+++.|+.+ ..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~------------~~~~~p~~r~~~~~~~~---------~~~lyv~GG~~~~~~~~ 71 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWT------------DIRCPFEKRRDAACVFW---------DNVVYILGGSQLFPIKR 71 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEE------------ECCCCSCCCBSCEEEEE---------TTEEEEECCBSSSBCCE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEe------------cCCCCCcccceeEEEEE---------CCEEEEEeCCCCCCcce
Confidence 466667653 56888888876532 22222211112222233 55677777755 56
Q ss_pred EEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC------CcEEEeeeccCCCee
Q 021036 159 VRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS------GSFDLWKCDISCNKF 232 (318)
Q Consensus 159 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d------g~i~vw~~~~~~~~~ 232 (318)
+.+||..+.+-...-..... . .-..++. -++.+++.|+.+ ..+.+| |..+.++
T Consensus 72 ~~~~d~~~~~W~~~~~~p~~------------r-~~~~~~~------~~~~iyv~GG~~~~~~~~~~~~~~--d~~~~~W 130 (306)
T 3ii7_A 72 MDCYNVVKDSWYSKLGPPTP------------R-DSLAACA------AEGKIYTSGGSEVGNSALYLFECY--DTRTESW 130 (306)
T ss_dssp EEEEETTTTEEEEEECCSSC------------C-BSCEEEE------ETTEEEEECCBBTTBSCCCCEEEE--ETTTTEE
T ss_pred EEEEeCCCCeEEECCCCCcc------------c-cceeEEE------ECCEEEEECCCCCCCcEeeeEEEE--eCCCCce
Confidence 88888877643322111100 0 1112222 356778887755 346666 6777777
Q ss_pred eEeeeeecccCceeEEEEcCCCCEEEEecC---------CCcEEEEEecCCceeeee
Q 021036 233 DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ---------DNFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 233 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---------d~~v~iwd~~~~~~~~~~ 280 (318)
..+..+.........+. -++++++.|+. -..+.+||+.+.....+.
T Consensus 131 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 185 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC 185 (306)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC
T ss_pred EeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC
Confidence 66654432222222222 25666666653 345889999887766554
No 307
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.52 E-value=0.26 Score=40.51 Aligned_cols=147 Identities=7% Similarity=-0.147 Sum_probs=82.6
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe--CCCcEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS--SDGSVRI 161 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~--~d~~v~i 161 (318)
++++++-...+.|.+++.+.... +. .+.........+++ .+.+..|+.+. ..+.|..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~------------~~--l~~~~~~~P~giav-------dp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLR------------KV--LFWQELDQPRAIAL-------DPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC------------EE--EECSSCSSEEEEEE-------EGGGTEEEEEECSSSCEEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcE------------EE--EEeCCCCCccEEEE-------eCCCCEEEEEecCCCCEEEE
Confidence 46666666778899998875321 11 12223345678888 55444444444 2577888
Q ss_pred EECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc-eEEEEEeCCCcEEEeeeccCCCeeeEeeeeec
Q 021036 162 WDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL-MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 162 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
.++.... ...+... .-...+.|+++ +++ .++++-...+.|..++++-...+ .+. .+
T Consensus 150 ~~~dG~~-~~~~~~~-------------~l~~Pnglavd-----~~~~~lY~aD~~~~~I~~~d~dG~~~~--~~~--~~ 206 (318)
T 3sov_A 150 AGMDGSS-RFIIINS-------------EIYWPNGLTLD-----YEEQKLYWADAKLNFIHKSNLDGTNRQ--AVV--KG 206 (318)
T ss_dssp EETTSCS-CEEEECS-------------SCSCEEEEEEE-----TTTTEEEEEETTTTEEEEEETTSCSCE--EEE--CS
T ss_pred EEcCCCC-eEEEEEC-------------CCCCccEEEEe-----ccCCEEEEEECCCCEEEEEcCCCCceE--EEe--cC
Confidence 8776432 2221100 01245789999 754 45555556778888865432222 222 22
Q ss_pred ccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCc
Q 021036 241 HDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 241 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 275 (318)
.......+++.. +..+.+-...+.|..++..++.
T Consensus 207 ~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 207 SLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 234456777753 3455566667889999986554
No 308
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.48 E-value=0.21 Score=41.77 Aligned_cols=113 Identities=10% Similarity=0.040 Sum_probs=56.4
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR- 207 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~- 207 (318)
..-+.|+| .++|+.|+.+...|.|++++.. ++....+.... .+..........|+++ |+
T Consensus 18 ~~P~~i~~-------~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~-------~v~~~g~~g~~gia~~-----pdf 77 (353)
T 2g8s_A 18 DHPWALAF-------LPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVP-------DVWAHGQGGLLDVVLA-----PDF 77 (353)
T ss_dssp SSEEEEEE-------CSTTCCEEEEETTTEEEEEETT-TEECCCCBSCC-------CCCCSTTCSEEEEEEC-----TTH
T ss_pred CCcEEEEE-------cCCCCEEEEEeCCceEEEEeCC-CceeeEecCCc-------ccccCCCCCceeEEEC-----CCC
Confidence 34588999 8999834445567999999853 32211111000 0011122356789998 74
Q ss_pred ---ceEEEEEeC-------CCcEEEeeeccCCCeee---Eee-eee---cccCceeEEEEcCCCCEEEEec
Q 021036 208 ---LMLLAVGKG-------SGSFDLWKCDISCNKFD---KVG-SYN---AHDQVVTGLAWAFDGCCLYSCS 261 (318)
Q Consensus 208 ---~~~l~~~~~-------dg~i~vw~~~~~~~~~~---~~~-~~~---~h~~~v~~~~~~~~~~~l~s~~ 261 (318)
+.+.++-.. ...|..|+++....... .+. .+. ........++|.|+|.++++.+
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 444444332 22455554432222211 111 111 1111235799999997555543
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.46 E-value=0.35 Score=47.23 Aligned_cols=146 Identities=13% Similarity=0.097 Sum_probs=90.8
Q ss_pred ccEEEEec----------CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEE
Q 021036 84 FSILAVGG----------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTG 153 (318)
Q Consensus 84 ~~~l~~g~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~ 153 (318)
..+|++|+ ..|.|.++++..++ .+.+... ...++|++++- -+|++++ |
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k------------L~lv~~~-~v~g~v~al~~--------~~g~Lla-~ 901 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK------------LQTVAEK-EVKGAVYSMVE--------FNGKLLA-S 901 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTE------------EEEEEEE-EESSCEEEEEE--------ETTEEEE-E
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCE------------EEEEEEE-EcCCcCEEEee--------eCCEEEE-E
Confidence 46788775 45789999987432 2333332 23678898875 2454444 3
Q ss_pred eCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeee
Q 021036 154 SSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFD 233 (318)
Q Consensus 154 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 233 (318)
...+|++|++...+.+. ... .....+..+... ..++++++|+.-..|.++.++....+..
T Consensus 902 -ig~~l~vy~l~~~~~L~-~~~-------------~~~~~i~~~~l~-----~~~~~I~vgD~~~Sv~~~~y~~~~~~L~ 961 (1158)
T 3ei3_A 902 -INSTVRLYEWTTEKELR-TEC-------------NHYNNIMALYLK-----TKGDFILVGDLMRSVLLLAYKPMEGNFE 961 (1158)
T ss_dssp -ETTEEEEEEECTTSCEE-EEE-------------EECCCSCEEEEE-----EETTEEEEEESSBCEEEEEEETTTTEEE
T ss_pred -cCCEEEEEECCCCceEE-EEe-------------eccccEEEEEEe-----ccCCEEEEEEhhheEEEEEEEcCCCeEE
Confidence 34799999998655333 110 000112223332 2367899999888888887676666644
Q ss_pred EeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecC
Q 021036 234 KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHG 273 (318)
Q Consensus 234 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 273 (318)
.+.. ..+...++++.+-.++ .++.+..+|.+.+.....
T Consensus 962 ~~a~-D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 962 EIAR-DFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEE-CCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EEEe-ecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 4432 2245578888876554 677788999999998754
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.42 E-value=0.21 Score=40.71 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=62.3
Q ss_pred CCcEEEEEeCC-----CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCC---
Q 021036 146 PQVLLVTGSSD-----GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGS--- 217 (318)
Q Consensus 146 ~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~d--- 217 (318)
++.+++.|+.+ ..+.+||+.+.+-...-.... .. .-..++. -++.+++.|+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~------------~r-~~~~~~~------~~~~iyv~GG~~~~~ 228 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNT------------IR-SGAGVCV------LHNCIYAAGGYDGQD 228 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSS------------CC-BSCEEEE------ETTEEEEECCBCSSS
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCC------------cc-ccceEEE------ECCEEEEEeCCCCCC
Confidence 45677777654 458888887654322111000 00 1112223 256788888754
Q ss_pred --CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCceeeee
Q 021036 218 --GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNSLSQVS 280 (318)
Q Consensus 218 --g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~ 280 (318)
..+.+| |..+.++..+..+.........+.+ ++++++.|+.+ ..+.+||+.+.....+.
T Consensus 229 ~~~~v~~y--d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 229 QLNSVERY--DVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp BCCCEEEE--ETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred ccceEEEE--eCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 446777 6777787666544322222222222 56777777754 45788998887766553
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.36 E-value=0.45 Score=41.34 Aligned_cols=115 Identities=9% Similarity=0.043 Sum_probs=60.9
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeee-ecccceeEEEEeeccCCC-
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVT-VNTVPISVLSLILPVQSP- 206 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~- 206 (318)
..-+.|+| .++|+++++-...+.|++++...++.......... ... .....+..|+++ |
T Consensus 27 ~~P~~~a~-------~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~-------~~~~~g~~Gllgia~~-----Pd 87 (454)
T 1cru_A 27 NKPHALLW-------GPDNQIWLTERATGKILRVNPESGSVKTVFQVPEI-------VNDADGQNGLLGFAFH-----PD 87 (454)
T ss_dssp SSEEEEEE-------CTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC-------CCCTTSSCSEEEEEEC-----TT
T ss_pred CCceEEEE-------cCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcc-------ccccCCCCceeEEEEC-----CC
Confidence 35579999 89998777765445788887654543221111000 000 013456789998 6
Q ss_pred ---CceEEEEEeC------------CCcEEEeeeccCCCee---eEeee-eec-ccCceeEEEEcCCCCEEEEecC
Q 021036 207 ---RLMLLAVGKG------------SGSFDLWKCDISCNKF---DKVGS-YNA-HDQVVTGLAWAFDGCCLYSCSQ 262 (318)
Q Consensus 207 ---~~~~l~~~~~------------dg~i~vw~~~~~~~~~---~~~~~-~~~-h~~~v~~~~~~~~~~~l~s~~~ 262 (318)
++.+.++-+. ...|.-|+++...... +.+.. +.. .......|+|.|+|.+.++.+.
T Consensus 88 f~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 88 FKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 4555444432 2345555443222221 12221 211 1224578999999986666443
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.34 E-value=0.59 Score=42.47 Aligned_cols=168 Identities=8% Similarity=-0.059 Sum_probs=96.0
Q ss_pred CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEEECCCccee
Q 021036 92 RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIWDGYIQELQ 170 (318)
Q Consensus 92 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~ 170 (318)
..+.|+..++++.+. .....+. .-..+..|+| .+ ++.++++-..++.|..+++......
T Consensus 13 ~~~~I~~i~l~~~~~------------~~~~~~~-~~~~~~~l~~-------d~~~~~lywtD~~~~~I~r~~~~g~~~~ 72 (628)
T 4a0p_A 13 RRADIRRISLETNNN------------NVAIPLT-GVKEASALDF-------DVTDNRIYWTDISLKTISRAFMNGSALE 72 (628)
T ss_dssp ETTEEEEEESSCTTC------------EEECCCC-SCSCEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred eCCcEEEEECCCCCc------------ceEEEcC-CCCceEEEEE-------ECCCCEEEEEECCCCeEEEEECCCCCcE
Confidence 456799999986431 1111122 2345788999 54 4555556666789998888754332
Q ss_pred eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEE
Q 021036 171 KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAW 250 (318)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 250 (318)
..+... ......|++++ ..++++++-...+.|.+.+++-...+ .+ +...-.....+++
T Consensus 73 ~v~~~g--------------~~~P~GlAvD~----~~~~LY~tD~~~~~I~v~~~dG~~~~--~l--~~~~l~~P~~iav 130 (628)
T 4a0p_A 73 HVVEFG--------------LDYPEGMAVDW----LGKNLYWADTGTNRIEVSKLDGQHRQ--VL--VWKDLDSPRALAL 130 (628)
T ss_dssp EEECSS--------------CSCCCEEEEET----TTTEEEEEETTTTEEEEEETTSTTCE--EE--ECSSCCCEEEEEE
T ss_pred EEEeCC--------------CCCcceEEEEe----CCCEEEEEECCCCEEEEEecCCCcEE--EE--EeCCCCCcccEEE
Confidence 222111 11456788871 34556666666788888854432221 22 1123345689999
Q ss_pred cCCCCEEEEec--CCCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 251 AFDGCCLYSCS--QDNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 251 ~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
+|...+|+... ..+.|...++.+.....+...- ....++++++++..|..+
T Consensus 131 dp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~---------------~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 131 DPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV---------------GRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC---------------SSEEEEEEETTTTEEEEE
T ss_pred ccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC---------------CCcceEEEccccCEEEEE
Confidence 99654554443 3567888887765444332111 145788888876665544
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.33 E-value=0.43 Score=40.85 Aligned_cols=229 Identities=10% Similarity=0.085 Sum_probs=124.6
Q ss_pred cceEEeeCCCceeEeecCCCCCCCceecchh------c---cccccccceeeeeccccc------CCCC----ccccccc
Q 021036 18 HPTVAASKSKGNSITKIPSNCCLPLITADQY------A---SRSAMLHSLAVAWSPVLR------LSSK----KYPVPQN 78 (318)
Q Consensus 18 ~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~w~p~~~------~~~~----~~~v~~~ 78 (318)
..+++--...++.|+|+++...+........ . .-+.+.......|+-.+. +.+| ..-|...
T Consensus 77 ~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY 156 (494)
T 1bpo_A 77 SKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINY 156 (494)
T ss_dssp SSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEE
T ss_pred CcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEE
Confidence 3455555588999999999777665543210 0 011112233567765431 1122 1235555
Q ss_pred CCCCCccEEEEec-------CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEE
Q 021036 79 GSSNWFSILAVGG-------RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLV 151 (318)
Q Consensus 79 ~~s~~~~~l~~g~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~ 151 (318)
..++++++++..+ ..|.+.+|+.+.+ .-+.+.+|.+....+.. +.+.....+|+
T Consensus 157 ~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---------------~sQ~ieGhaa~F~~~~~----~g~~~~~~lf~ 217 (494)
T 1bpo_A 157 RTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------------VSQPIEGHAASFAQFKM----EGNAEESTLFC 217 (494)
T ss_dssp EECTTSSEEEEEEEEEETTEEEEEEEEEESTTC---------------CEEEECCSEEEEEEEEC----TTCSSEEEEEE
T ss_pred EECCCCCeEEEEeecccCCcccceEEEeecccc---------------ccchheeeeeeeEEEec----CCCCCCceEEE
Confidence 6677877776432 3567888988853 33567788766555544 00111123455
Q ss_pred EEeCC---CcEEEEECCCc-ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeecc
Q 021036 152 TGSSD---GSVRIWDGYIQ-ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDI 227 (318)
Q Consensus 152 s~~~d---~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~ 227 (318)
-+... +.+.|.++... .....+.... ..+........+.|| ++.++ +.-..++.-..-|.|++| |+
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~--vdv~fppe~~~DFPv-amqvs-----~kygviyviTK~G~i~ly--Dl 287 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKA--VDVFFPPEAQNDFPV-AMQIS-----EKHDVVFLITKYGYIHLY--DL 287 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEE--EECCCCTTSTTCCEE-EEEEE-----TTTTEEEEEETTSEEEEE--ET
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCcccee--eeeeCCcccccCcee-EEEec-----ccCCEEEEEecCceEEEE--ec
Confidence 45443 68888888543 1111111000 000000011223344 67777 677788888899999999 67
Q ss_pred CCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 228 SCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 228 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
.++. .+..-+-....|..-+-+....=++.....|.|.--.+....+.
T Consensus 288 eTgt--~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 288 ETGT--CIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (494)
T ss_dssp TTCC--EEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHH
T ss_pred ccce--eeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccch
Confidence 7877 34333334455655555554444555667888777777665543
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.32 E-value=0.43 Score=40.71 Aligned_cols=145 Identities=9% Similarity=0.046 Sum_probs=81.7
Q ss_pred CCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeee
Q 021036 146 PQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKC 225 (318)
Q Consensus 146 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~ 225 (318)
+|..++.+- ++.||.-++..+...+.+.... ......+..+..+ |+|++||..+ +..|.|-.+
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~----------~i~f~~i~qlvlS-----psG~lLAl~g-~~~V~Vv~L 93 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSR----------HLVLDDTFHVISS-----TSGDLLCLFN-DNEIFVMEV 93 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTT----------TCCCCTTCEEEEC-----TTSSEEEEEC-SSEEEEEEC
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCc----------ccccCceeEEEEC-----CCCCEEEEec-CCeEEEEEe
Confidence 333344332 4677777776443333333221 0012256778898 9999999987 557777754
Q ss_pred ccCCCee--------eEeeeeec------ccCceeEEEEcCC---CCEEEEecCCCcEEEEEecCCceeeeecCCCCCCc
Q 021036 226 DISCNKF--------DKVGSYNA------HDQVVTGLAWAFD---GCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPGL 288 (318)
Q Consensus 226 ~~~~~~~--------~~~~~~~~------h~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 288 (318)
.-..... .....+.- ...+|..+.|+|- +..|++-..|++|++||+...............
T Consensus 94 P~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~-- 171 (452)
T 3pbp_A 94 PWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNN-- 171 (452)
T ss_dssp CTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCS--
T ss_pred cCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccc--
Confidence 4111000 01122221 2467999999995 558999999999999999862211111111111
Q ss_pred cccccCCCcceeeeEEEEcCCCc
Q 021036 289 QSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 289 ~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
...+......|.+++|.+++-
T Consensus 172 --~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 172 --SFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp --EEESCSSCCCEEEEEECTTSS
T ss_pred --ccCCCcccceEEEEEEcCCCc
Confidence 011122335788999998764
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.31 E-value=0.2 Score=40.93 Aligned_cols=111 Identities=10% Similarity=0.108 Sum_probs=61.1
Q ss_pred CCcEEEEEeC-C-----CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCc
Q 021036 146 PQVLLVTGSS-D-----GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGS 219 (318)
Q Consensus 146 ~~~~l~s~~~-d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~ 219 (318)
++++++.|+. + ..+.+||..+.+-...-..... . .-..++. -++++++.|+.++.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------------r-~~~~~~~------~~~~iyv~GG~~~~ 208 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA------------R-SLFGATV------HDGRIIVAAGVTDT 208 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC------------C-BSCEEEE------ETTEEEEEEEECSS
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc------------h-hceEEEE------ECCEEEEEeccCCC
Confidence 4567777775 2 3688888876543221110000 0 1112223 35678888876543
Q ss_pred -----EEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC--------------CcEEEEEecCCceeee
Q 021036 220 -----FDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD--------------NFVRSWIFHGNSLSQV 279 (318)
Q Consensus 220 -----i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------------~~v~iwd~~~~~~~~~ 279 (318)
+.+| |..+.++..+..+.........+.+ ++++++.|+.+ ..+.+||+.+.+...+
T Consensus 209 ~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 209 GLTSSAEVY--SITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp SEEEEEEEE--ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CccceEEEE--ECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 5555 7778888776544322222222222 56677777653 2477888888777665
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.21 E-value=0.4 Score=39.20 Aligned_cols=70 Identities=7% Similarity=0.116 Sum_probs=40.9
Q ss_pred CceEEEEEeC------CCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCC-----CcEEEEEecCCc
Q 021036 207 RLMLLAVGKG------SGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD-----NFVRSWIFHGNS 275 (318)
Q Consensus 207 ~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~ 275 (318)
++.+++.|+. -..+.+| |..+.++..+..+.........+.+ ++++++.|+.+ ..+.+||+.+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIY--NPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEE--ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEE--cCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 5677777764 2346666 7778777666544322222222222 56677777643 357788888776
Q ss_pred eeeee
Q 021036 276 LSQVS 280 (318)
Q Consensus 276 ~~~~~ 280 (318)
...+.
T Consensus 234 W~~~~ 238 (318)
T 2woz_A 234 WEVMT 238 (318)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66554
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.18 E-value=0.41 Score=39.07 Aligned_cols=70 Identities=9% Similarity=0.169 Sum_probs=42.8
Q ss_pred CceEEEEEeC-C-----CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCC-----cEEEEEecCCc
Q 021036 207 RLMLLAVGKG-S-----GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDN-----FVRSWIFHGNS 275 (318)
Q Consensus 207 ~~~~l~~~~~-d-----g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~ 275 (318)
++++++.|+. + ..+.+| |..+.++..+..+.........+.+ ++++++.|+.++ .+.+||+.+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVY--DPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEE--ETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEE--eCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 5677778775 2 346676 6777777666544322222222222 567777777654 58889988877
Q ss_pred eeeee
Q 021036 276 LSQVS 280 (318)
Q Consensus 276 ~~~~~ 280 (318)
...+.
T Consensus 224 W~~~~ 228 (315)
T 4asc_A 224 WAPFE 228 (315)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 66654
No 318
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.09 E-value=0.51 Score=39.40 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=57.2
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR- 207 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~- 207 (318)
..-..++| .++|+++++ ..++.|++++ .++........ +..........|+++ |+
T Consensus 31 ~~P~~ia~-------~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~---------v~~~g~~~p~gia~~-----pdf 86 (352)
T 2ism_A 31 EVPWALAF-------LPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS---------VYHRGESGLLGLALH-----PRF 86 (352)
T ss_dssp SCEEEEEE-------CTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC---------CCCSTTCSEEEEEEC-----TTT
T ss_pred CCceEEEE-------cCCCeEEEE-eCCCeEEEEE--CCCccEeecce---------EeecCCCCceeEEEC-----CCC
Confidence 34578999 889986555 5669999998 33321111000 001112356789998 76
Q ss_pred ---ceEEEEEeCC-----CcEEEeeeccCCCee---eEee-eee---cccCceeEEEEcCCCCEEEEec
Q 021036 208 ---LMLLAVGKGS-----GSFDLWKCDISCNKF---DKVG-SYN---AHDQVVTGLAWAFDGCCLYSCS 261 (318)
Q Consensus 208 ---~~~l~~~~~d-----g~i~vw~~~~~~~~~---~~~~-~~~---~h~~~v~~~~~~~~~~~l~s~~ 261 (318)
+.++++-... +.|..|+.+ .... +.+. .+. +.......++|.|+|.+.++.+
T Consensus 87 ~~~g~lYv~~~~~~~~~~~~v~r~~~~--~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 87 PQEPYVYAYRTVAEGGLRNQVVRLRHL--GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEEEC--SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCCEEEEEEecCCCCCccEEEEEEeC--CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 4444443332 566666443 3211 1221 122 1111236899999998666643
No 319
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.02 E-value=1 Score=42.14 Aligned_cols=155 Identities=12% Similarity=-0.127 Sum_probs=82.6
Q ss_pred cCCCCC-ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCC-CcEEEEEeC
Q 021036 78 NGSSNW-FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNP-QVLLVTGSS 155 (318)
Q Consensus 78 ~~~s~~-~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~-~~~l~s~~~ 155 (318)
++++.. ++++++-...+.|.+.+++... ....+.........|++ .+. +.++++-..
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~--------------~~~l~~~~l~~P~gIaV-------Dp~~g~LYwtD~g 534 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVK--------------RKTLFRENGSKPRAIVV-------DPVHGFMYWTDWG 534 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSS--------------EEEEEECTTCCEEEEEE-------ETTTTEEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCe--------------EEEEEeCCCCCcceEEE-------ecCCCCEEEecCC
Confidence 444433 3566666778889999887532 11122223345788999 554 444444333
Q ss_pred C-CcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEE-eCCCcEEEeeeccCCCeee
Q 021036 156 D-GSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG-KGSGSFDLWKCDISCNKFD 233 (318)
Q Consensus 156 d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~-~~dg~i~vw~~~~~~~~~~ 233 (318)
. +.|...++........+.. .-...+.|+++ +.+..|+.+ ...+.|..++++ .....
T Consensus 535 ~~~~I~~~~~dG~~~~~lv~~--------------~l~~P~GLavD-----~~~~~LYwaD~~~~~I~~~d~d--G~~~~ 593 (791)
T 3m0c_C 535 TPAKIKKGGLNGVDIYSLVTE--------------NIQWPNGITLD-----LLSGRLYWVDSKLHSISSIDVN--GGNRK 593 (791)
T ss_dssp SSCEEEEEETTSCCEEEEECS--------------SCSCEEEEEEE-----TTTTEEEEEETTTTEEEEEETT--SCSCE
T ss_pred CCCeEEEEecCCCceEEEEeC--------------CCCCceEEEEe-----cCCCeEEEEeCCCCcEEEEecC--CCceE
Confidence 3 6788888864432222211 11256789998 555444444 456678777543 33322
Q ss_pred EeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCc
Q 021036 234 KVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNS 275 (318)
Q Consensus 234 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 275 (318)
.+..-.+.-....+|++.. +.++++-...+.|...+..++.
T Consensus 594 ~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 594 TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCc
Confidence 2222111122345666532 2344455566788888866553
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.84 E-value=0.67 Score=38.71 Aligned_cols=108 Identities=16% Similarity=0.040 Sum_probs=57.1
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcc-eeeeecccccccccceeeeeecccceeEEEEeeccCCCC
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQE-LQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR 207 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~ 207 (318)
..-..|+| .++|+++++ ..++.|+++|. .++ .+..+.. ..........|+++ |+
T Consensus 29 ~~P~~ia~-------~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v-----------~~~g~~g~~gia~~-----pd 83 (354)
T 3a9g_A 29 EVPWSIAP-------LGGGRYLVT-ERPGRLVLISP-SGKKLVASFDV-----------ANVGEAGLLGLALH-----PE 83 (354)
T ss_dssp SCEEEEEE-------EETTEEEEE-ETTTEEEEECS-SCEEEEEECCC-----------CCSTTCSEEEEEEC-----TT
T ss_pred CCCeEEEE-------cCCCeEEEE-eCCCEEEEEeC-CCceEeeccce-----------eecCCCceeeEEeC-----CC
Confidence 45688999 788875554 56699998873 343 1111110 01112356789998 75
Q ss_pred ----ceEEEEEeC---C----CcEEEeeeccCCCe---eeEe-eeeec-ccCceeEEEEcCCCCEEEEec
Q 021036 208 ----LMLLAVGKG---S----GSFDLWKCDISCNK---FDKV-GSYNA-HDQVVTGLAWAFDGCCLYSCS 261 (318)
Q Consensus 208 ----~~~l~~~~~---d----g~i~vw~~~~~~~~---~~~~-~~~~~-h~~~v~~~~~~~~~~~l~s~~ 261 (318)
+.++++-+. + ..|..|+.+..... .+.+ ..+.. .......++|.|+|.++++.+
T Consensus 84 f~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 84 FPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp TTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 555444432 2 45666644322111 1111 11221 111246799999998666644
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.74 E-value=0.73 Score=38.36 Aligned_cols=119 Identities=13% Similarity=-0.028 Sum_probs=64.2
Q ss_pred eeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeec
Q 021036 123 LFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILP 202 (318)
Q Consensus 123 ~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 202 (318)
.+...-..-+.|+| .++|+++++--..|.|++++...++........ .+..........|+++
T Consensus 26 ~va~gL~~P~~ia~-------~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~--------~v~~~g~~GllGia~~-- 88 (347)
T 3das_A 26 TVATGLNSPWGLAP-------LPGGDLLVSSRDEATITRVDAKTGRKTELGEVP--------GVSPSGEGGLLGIALS-- 88 (347)
T ss_dssp EEECCCSSEEEEEE-------CTTSCEEEEETTTCEEEEECTTTCCEEEEEECT--------TCCCBTTBSEEEEEEC--
T ss_pred EeecCCCCceEEEE-------cCCCcEEEEEecCCEEEEEECCCCcEeeecccC--------ceeecCCCCceeeEec--
Confidence 34333456689999 899988777765899999986655432111000 0111223467889998
Q ss_pred cCCCC----ceEEEEEe--CCCcEEEeeeccCC------CeeeEee-eee-cccCceeEEEEcCCCCEEEEec
Q 021036 203 VQSPR----LMLLAVGK--GSGSFDLWKCDISC------NKFDKVG-SYN-AHDQVVTGLAWAFDGCCLYSCS 261 (318)
Q Consensus 203 ~~~~~----~~~l~~~~--~dg~i~vw~~~~~~------~~~~~~~-~~~-~h~~~v~~~~~~~~~~~l~s~~ 261 (318)
|+ +.+.++-+ .++.|.-|.++... ...+.+. .+. ........|.|.|||.+.++.+
T Consensus 89 ---Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 89 ---PDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp ---TTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred ---cccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 74 44444322 34455555433210 1111221 121 1112235799999998777654
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.53 E-value=0.83 Score=37.59 Aligned_cols=144 Identities=10% Similarity=-0.004 Sum_probs=71.6
Q ss_pred cccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC
Q 021036 128 NSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR 207 (318)
Q Consensus 128 ~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~ 207 (318)
...+.+|.+ .+ +..++ ++.++.|.. ..+.|+.-........ ....+..+.+. ++
T Consensus 79 ~~~~~~i~~-------~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~-----------~~~~~~~i~~~-----~~ 132 (327)
T 2xbg_A 79 DYRFNSVSF-------QG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPK-----------LPGSPRLIKAL-----GN 132 (327)
T ss_dssp CCEEEEEEE-------ET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTT-----------CSSCEEEEEEE-----ET
T ss_pred CccEEEEEe-------cC-CeEEE-EECCCeEEE-ECCCCCCceECccccC-----------CCCCeEEEEEE-----CC
Confidence 446888888 44 44444 445564433 3333443332221100 01134566666 56
Q ss_pred ceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeeeecCCCCCC
Q 021036 208 LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQVSIPTNTPG 287 (318)
Q Consensus 208 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 287 (318)
+..++.+. +|.|..- .-....++.+. ......+..+.+.+++.+++.+...+..+-.|-.......+. .+.
T Consensus 133 ~~~~~~~~-~g~v~~S--~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~~--- 203 (327)
T 2xbg_A 133 GSAEMITN-VGAIYRT--KDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RTT--- 203 (327)
T ss_dssp TEEEEEET-TCCEEEE--SSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CCS---
T ss_pred CCEEEEeC-CccEEEE--cCCCCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CCC---
Confidence 66666664 5654332 11233454433 234557889999999888776654333333332122222221 111
Q ss_pred ccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 288 LQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 288 ~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
...+..+++.++++.++.+
T Consensus 204 ----------~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 204 ----------SRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp ----------SSCEEEEEECTTSCEEEEE
T ss_pred ----------CCccceeEECCCCCEEEEe
Confidence 1255677777777665543
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.47 E-value=0.91 Score=38.75 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=74.5
Q ss_pred cEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccc----eeeeeecccceeEEEEeeccCC
Q 021036 130 WITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLL----KEVVTVNTVPISVLSLILPVQS 205 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~l~~~~~~~~ 205 (318)
.|..+.. +++|++|+..+. ..|.|-.+..+.....-..-..++... .........+|..+.|+
T Consensus 67 ~i~qlvl-------SpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWH----- 133 (452)
T 3pbp_A 67 DTFHVIS-------STSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFH----- 133 (452)
T ss_dssp TTCEEEE-------CTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEEC-----
T ss_pred ceeEEEE-------CCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEec-----
Confidence 5777888 899999998864 588888887332111100000001100 00111125679999998
Q ss_pred CC---ceEEEEEeCCCcEEEeeeccCCCeeeEeeeee---------cccCceeEEEEcCCCCEEEE--ecCCCcEEEE
Q 021036 206 PR---LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN---------AHDQVVTGLAWAFDGCCLYS--CSQDNFVRSW 269 (318)
Q Consensus 206 ~~---~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~s--~~~d~~v~iw 269 (318)
|- +..|++-..|+.|++||+.....+ +. .+. .....|.+++|..++-.|.. ....|.|+-.
T Consensus 134 Pl~~~ds~LVVLtsD~~Ir~yDl~~s~~~--P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 134 PKSYRDSCIVVLKEDDTITMFDILNSQEK--PI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTBGGGCEEEEEETTSCEEEEETTCTTSC--CE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cccCCCCeEEEEecCCEEEEEEcccCCCC--Cc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 54 458888889999999977653333 22 221 12256889999987664444 5577777544
No 324
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.45 E-value=1.4 Score=39.85 Aligned_cols=150 Identities=12% Similarity=-0.031 Sum_probs=84.9
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCC-CCcEEEEEeCCCcEEEE
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSN-PQVLLVTGSSDGSVRIW 162 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~-~~~~l~s~~~d~~v~iw 162 (318)
+.++++-...+.|+.++.+.... + ..+.........+++ .. .++++++-+..+.|.+.
T Consensus 361 ~~ly~sD~~~~~I~r~~~~g~~~------------~--~v~~~~~~~p~GlAv-------D~~~~~lY~tD~~~~~I~v~ 419 (619)
T 3s94_A 361 GYIYWTDDEVRAIRRSFIDGSGS------------Q--FVVTAQIAHPDGIAV-------DWVARNLYWTDTGTDRIEVT 419 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC------------E--EEECSSCSCCCEEEE-------ETTTTEEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCeEEEEEcCCCcc------------E--EEEECCCCCcCceEE-------ecccCcEEEEeCCCCcEEEE
Confidence 35555555678888888875321 1 112222234567777 43 45566666667889999
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeC-CCcEEEeeeccCCCeeeEeeeeec
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKG-SGSFDLWKCDISCNKFDKVGSYNA 240 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~~ 240 (318)
++..... ..+... .-.....|++. |. |.++.+-.. .+.|...++| ......+ ...
T Consensus 420 ~~~G~~~-~~l~~~-------------~l~~P~~iavd-----p~~G~ly~tD~g~~~~I~r~~~d--G~~~~~l--~~~ 476 (619)
T 3s94_A 420 RLNGTMR-KILISE-------------DLEEPRAIVLD-----PMVGYMYWTDWGEIPKIERAALD--GSDRVVL--VNT 476 (619)
T ss_dssp ETTSCSC-EEEECT-------------TCCSEEEEEEE-----TTTTEEEEEECSSSCEEEEEETT--SCSCEEE--ECS
T ss_pred eCCCCeE-EEEEEC-------------CCCCeeeEEEE-----cCCCcEEEecCCCCCEEEEEccC--CCccEEE--EeC
Confidence 8875432 222111 11256789998 65 655555432 3566655333 3221122 122
Q ss_pred ccCceeEEEEcCCCCEEEEe-cCCCcEEEEEecCCcee
Q 021036 241 HDQVVTGLAWAFDGCCLYSC-SQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 241 h~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~ 277 (318)
.-.....+++++++..|..+ +..+.|..+++.+....
T Consensus 477 ~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~ 514 (619)
T 3s94_A 477 SLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRR 514 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE
T ss_pred CCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceE
Confidence 23467889999876666555 45578888988765443
No 325
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.41 E-value=1.5 Score=40.38 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=62.7
Q ss_pred CCcEEEEEeCCC------cEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCC-
Q 021036 146 PQVLLVTGSSDG------SVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSG- 218 (318)
Q Consensus 146 ~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg- 218 (318)
++.+++.|+.++ .+.+||..+.+-...-.... .. .-.+++.. .++.+++.|+.++
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~------------~R-~~h~~~~~-----~~~~iyv~GG~~~~ 512 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH------------TR-FRHSACSL-----PDGNVLILGGVTEG 512 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB------------CC-BSCEEEEC-----TTSCEEEECCBCSS
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC------------Cc-ccceEEEE-----cCCEEEEECCCCCC
Confidence 677788877543 47788887654322111000 00 11122332 4788888887655
Q ss_pred -cEEEeeeccCCCeeeEeee---eecccCceeEEEEcCC-CCEEEEecC--C-----CcEEEEEecCCc
Q 021036 219 -SFDLWKCDISCNKFDKVGS---YNAHDQVVTGLAWAFD-GCCLYSCSQ--D-----NFVRSWIFHGNS 275 (318)
Q Consensus 219 -~i~vw~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~-~~~l~s~~~--d-----~~v~iwd~~~~~ 275 (318)
.+.+| |..+.+|..+.. +........++.+..+ +++++.|+. + ..+.+||+.+..
T Consensus 513 ~~v~~y--d~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 513 PAMLLY--NVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSEEEE--ETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEE--ECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 56676 777888766553 2111222233555655 667777765 2 458899998877
No 326
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.38 E-value=0.89 Score=39.44 Aligned_cols=19 Identities=11% Similarity=-0.085 Sum_probs=14.7
Q ss_pred cceeEEEEeeccCCCCceEEEEEe
Q 021036 192 VPISVLSLILPVQSPRLMLLAVGK 215 (318)
Q Consensus 192 ~~v~~l~~~~~~~~~~~~~l~~~~ 215 (318)
+....|+|. |+|.++++.+
T Consensus 144 H~~~~l~f~-----pDG~Lyv~~G 162 (454)
T 1cru_A 144 HQSGRLVIG-----PDQKIYYTIG 162 (454)
T ss_dssp CCEEEEEEC-----TTSCEEEEEC
T ss_pred CCCCeEeEC-----CCCeEEEEEC
Confidence 356889999 9998777654
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.21 E-value=1.2 Score=41.02 Aligned_cols=118 Identities=10% Similarity=0.036 Sum_probs=62.2
Q ss_pred CCCcEEEEEeCCC--cEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCC-ceEEEEEeC--C--
Q 021036 145 NPQVLLVTGSSDG--SVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPR-LMLLAVGKG--S-- 217 (318)
Q Consensus 145 ~~~~~l~s~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~l~~~~~--d-- 217 (318)
.++.+++.|+.++ .+.+||..+.+-...-.....+. .......+.+. .+ +.+++.|+. +
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~---------~r~~~~a~v~~-----~~~~~iyv~GG~~~~~~ 564 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQ---------NSLVSAGLEFD-----PVSKQGIILGGGFMDQT 564 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGG---------SCCBSCEEEEE-----TTTTEEEEECCBCTTSS
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCC---------cccceeEEEEe-----CCCCEEEEECCcCCCCC
Confidence 3777888887654 68999988764332211000100 00112234445 44 778888875 2
Q ss_pred ---CcEEEeeeccCCCe------eeEeeeeecccCceeEEEEcCCCCEEEEecC--------CCcEEEEEecCCceee
Q 021036 218 ---GSFDLWKCDISCNK------FDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ--------DNFVRSWIFHGNSLSQ 278 (318)
Q Consensus 218 ---g~i~vw~~~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--------d~~v~iwd~~~~~~~~ 278 (318)
..+.+| |..+.. +..+.........-.++....++.+++.|+. ...+.+||+.+.....
T Consensus 565 ~~~~~v~~y--d~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 565 TVSDKAIIF--KYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp CBCCEEEEE--EECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEE
T ss_pred eeeCcEEEE--EccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEE
Confidence 346677 555555 4444332111111112223333677777774 3469999998876653
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.66 E-value=1.4 Score=43.62 Aligned_cols=230 Identities=10% Similarity=0.078 Sum_probs=116.7
Q ss_pred CccceEEeeCCCceeEeecCCCCCCCceecchh------c---cccccccceeeeeccccc------CCCC----ccccc
Q 021036 16 NTHPTVAASKSKGNSITKIPSNCCLPLITADQY------A---SRSAMLHSLAVAWSPVLR------LSSK----KYPVP 76 (318)
Q Consensus 16 ~~~~~~t~s~d~~i~iwd~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~w~p~~~------~~~~----~~~v~ 76 (318)
+...+++--...++.|+|+++...+.......- . .-+.+.......|+-.+. +.+| ...|.
T Consensus 75 P~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIi 154 (1630)
T 1xi4_A 75 PASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (1630)
T ss_pred CCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeE
Confidence 344566666688999999988776665443210 0 011122233567776431 2223 23466
Q ss_pred ccCCCCCccEEEEe-------cCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcE
Q 021036 77 QNGSSNWFSILAVG-------GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVL 149 (318)
Q Consensus 77 ~~~~s~~~~~l~~g-------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 149 (318)
.-..+++.++++.. ...|.+.+|+.+.+ .-+.+.||.+....+.. +.......+
T Consensus 155 nY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~---------------~sQ~iegha~~F~~~~~----~~~~~~~~l 215 (1630)
T 1xi4_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------------VSQPIEGHAASFAQFKM----EGNAEESTL 215 (1630)
T ss_pred EeeeCCCCCeEEEEeeccCCCcccceeeeeecccc---------------cchhhhHhHhhhheecc----CCCCCCceE
Confidence 66677787776643 24678889988753 23456677655444433 001112233
Q ss_pred EEEEeC---CCcEEEEECCCc-ceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeee
Q 021036 150 LVTGSS---DGSVRIWDGYIQ-ELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKC 225 (318)
Q Consensus 150 l~s~~~---d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~ 225 (318)
++.+.. .+.+.|-++... .....+... ...+........+.|| .+..+ +.-..+..-+.-|.|.+|
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk--~~~~~~~~~~~~Dfpv-~~~vs-----~k~g~iy~itk~G~~~~~-- 285 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK--AVDVFFPPEAQNDFPV-AMQIS-----EKHDVVFLITKYGYIHLY-- 285 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccCCCCCccc--cccccCCcccccCcce-EEEec-----cccCEEEEEecCceEEEE--
Confidence 333322 268888887543 111111100 0001001112233344 56666 666778888889999999
Q ss_pred ccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCce
Q 021036 226 DISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSL 276 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 276 (318)
|+.++.. +..-+-...+|...+-+....=++.....|.|.--.+....+
T Consensus 286 d~~t~~~--i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 286 DLETGTC--IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred ecccchh--hhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 5666663 322222233443333333322244444666665555554443
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.77 E-value=1.6 Score=33.72 Aligned_cols=109 Identities=12% Similarity=-0.068 Sum_probs=55.5
Q ss_pred EEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceE
Q 021036 131 ITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLML 210 (318)
Q Consensus 131 v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~ 210 (318)
-.++.| .++|.+.++ .||.|.-++-.+.....-+.... .+-...-..+..|.+. |+|.+
T Consensus 90 F~a~~f-------D~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~-------~vg~~gw~~~~~lff~-----p~G~L 148 (236)
T 1tl2_A 90 FQFLFF-------DPNGYLYAV--SKDKLYKASPPQSDTDNWIARAT-------EVGSGGWSGFKFLFFH-----PNGYL 148 (236)
T ss_dssp CSEEEE-------CTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSE-------EEECSSGGGEEEEEEC-----TTSCE
T ss_pred ceEEEE-------CCCCCEEEe--CCCEEEEeCCCcCCCCceecccc-------EeccCCCCceEEEEEC-----CCceE
Confidence 367888 889977777 56888777643221111000000 0001112367888998 99998
Q ss_pred EEEEeCCCcEEEeeeccCCC--eeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCc
Q 021036 211 LAVGKGSGSFDLWKCDISCN--KFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNF 265 (318)
Q Consensus 211 l~~~~~dg~i~vw~~~~~~~--~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~ 265 (318)
.++. |+.++-.. ...+. .+....+.- ..-..-.-+.|.+++.+++.. ++.
T Consensus 149 yav~--dg~lyr~~-~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 149 YAVH--GQQFYKAL-PPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp EEEE--TTEEEEEC-CCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred EEEe--CCcEEecC-CCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 8888 77654431 11111 000001111 111233446688888766555 563
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.70 E-value=2.3 Score=34.49 Aligned_cols=70 Identities=11% Similarity=0.039 Sum_probs=40.8
Q ss_pred CceEEEEEeCC-------CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecC------CCcEEEEEecC
Q 021036 207 RLMLLAVGKGS-------GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ------DNFVRSWIFHG 273 (318)
Q Consensus 207 ~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~~ 273 (318)
++.+++.|+.+ ..+.+| |..+.+++.+..+......-..+. .++.+++.|+. -..+.+||+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCY--DPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEE--ETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEE--eCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 56777777753 124455 777888766554332111111222 45666677764 24589999988
Q ss_pred Cceeeee
Q 021036 274 NSLSQVS 280 (318)
Q Consensus 274 ~~~~~~~ 280 (318)
.....+.
T Consensus 185 ~~W~~~~ 191 (318)
T 2woz_A 185 GDWKDLA 191 (318)
T ss_dssp TEEEEEC
T ss_pred CEEEECC
Confidence 7766554
No 331
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.68 E-value=2.6 Score=34.99 Aligned_cols=57 Identities=14% Similarity=0.206 Sum_probs=34.9
Q ss_pred ceeEEEEcCCCCEEEEecCCCcEEEEEecCCc-------eeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEEE
Q 021036 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNS-------LSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAMV 316 (318)
Q Consensus 244 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~~ 316 (318)
....++| .+|.++++.-..+.|...++.... ...+. . -...+..+++.|||.+.++.
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~-------------~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--S-------------GFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--E-------------SSCCEEEEEECTTSCEEEEE
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec--c-------------cCCCeeEEEECCCCcEEEEE
Confidence 4567777 466666666666777777776432 11111 1 11367899999999766553
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.66 E-value=1.1 Score=34.58 Aligned_cols=112 Identities=10% Similarity=-0.091 Sum_probs=60.9
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 208 (318)
..+..++| .|+|.+.+. .+|.+.-.+..+.+...-+.. .. .+-.........+.|. |+|
T Consensus 41 ~~~~~laf-------~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t------~IG~~Gw~~F~a~~fD-----~~G 99 (236)
T 1tl2_A 41 SNFKFLFL-------SPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AK------KIGNGGWNQFQFLFFD-----PNG 99 (236)
T ss_dssp TTCSEEEE-------CTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CE------EEECSCGGGCSEEEEC-----TTS
T ss_pred ccceeEEE-------CCCccEEEE--eCCeEEEECCCCCCccccccc-cc------EecccccccceEEEEC-----CCC
Confidence 36779999 788886666 667666555543221111110 00 0000011124678888 999
Q ss_pred eEEEEEeCCCcEEEeeeccCC-C--eeeEeee-eec-ccCceeEEEEcCCCCEEEEecCCCcEE
Q 021036 209 MLLAVGKGSGSFDLWKCDISC-N--KFDKVGS-YNA-HDQVVTGLAWAFDGCCLYSCSQDNFVR 267 (318)
Q Consensus 209 ~~l~~~~~dg~i~vw~~~~~~-~--~~~~~~~-~~~-h~~~v~~~~~~~~~~~l~s~~~d~~v~ 267 (318)
.+.++ .||.|+-++ ..+ + .+.-..+ +.. -=..+..|.|.|+|.+.+.. |+.++
T Consensus 100 ~LYav--~dG~iyr~~--pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 100 YLYAV--SKDKLYKAS--PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CEEEE--ETTEEEEES--CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CEEEe--CCCEEEEeC--CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 98888 469887773 311 1 1100001 100 11457899999999876666 77743
No 333
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.61 E-value=1.1 Score=37.33 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=57.4
Q ss_pred ceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeee---cccCceeEEEEcCC---CCEEEEecC----
Q 021036 193 PISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN---AHDQVVTGLAWAFD---GCCLYSCSQ---- 262 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~l~s~~~---- 262 (318)
....++|. |+|++++ +..+|.|+++ +. .++ +.+..+. ........|+++|+ +..|..+..
T Consensus 30 ~P~~ia~~-----pdG~l~V-~e~~g~I~~~--d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~ 99 (354)
T 3a9g_A 30 VPWSIAPL-----GGGRYLV-TERPGRLVLI--SP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE 99 (354)
T ss_dssp CEEEEEEE-----ETTEEEE-EETTTEEEEE--CS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred CCeEEEEc-----CCCeEEE-EeCCCEEEEE--eC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence 45688998 8998554 4566999888 42 333 3333321 22345789999997 444443322
Q ss_pred C----CcEEEEEecCC--cee---ee-ecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 263 D----NFVRSWIFHGN--SLS---QV-SIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 263 d----~~v~iwd~~~~--~~~---~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+ ..|..|+.... .+. .+ ...+ ....|. ...++|.|||.+.++
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~---------~~~~h~--~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 100 GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP---------GAYIHN--GGRIRFGPDGMLYIT 151 (354)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEEEEEEEEEE---------CCSSCC--CCCEEECTTSCEEEE
T ss_pred CCCcceEEEEEEECCCCcCcCccEEEEEcCC---------CCCCcC--CceEEECCCCcEEEE
Confidence 3 56777777654 111 10 0000 011132 367999999976665
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.12 E-value=3 Score=33.90 Aligned_cols=67 Identities=7% Similarity=-0.020 Sum_probs=38.6
Q ss_pred CCceEEEEEe--CCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecC-CCcEEEEEecCCceeee
Q 021036 206 PRLMLLAVGK--GSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ-DNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 206 ~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~ 279 (318)
++++.|+-.. .++.-.||.+++.....+ .+..+.. ..|+|+++.|+-.+. ...|..-++.++....+
T Consensus 113 ~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~---~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 113 LIGNYIYYLHYDTQTATSLYRIRIDGEEKK---KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EETTEEEEEEESSSSCEEEEEEETTSCCCE---EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred EeCCEEEEEeecCCCCceEEEEECCCCCeE---EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 6677776665 455566665566544322 2333322 346778887775554 56777777766554433
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.08 E-value=3.3 Score=34.38 Aligned_cols=145 Identities=15% Similarity=0.055 Sum_probs=71.8
Q ss_pred ccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeee----ccccccEEEEEeeeecCCCCCC----CcEEEEEe-
Q 021036 84 FSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLF----QAHNSWITSISLAVLSSDSSNP----QVLLVTGS- 154 (318)
Q Consensus 84 ~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~~~~~----~~~l~s~~- 154 (318)
|.++++--..|.|++++..+++. ..+..+ .........|++ +|+ +.+.++-+
T Consensus 43 G~llVter~~G~I~~v~~~~g~~------------~~v~~~~~v~~~g~~GllGia~-------~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 43 GDLLVSSRDEATITRVDAKTGRK------------TELGEVPGVSPSGEGGLLGIAL-------SPDYASDHMVYAYFTS 103 (347)
T ss_dssp SCEEEEETTTCEEEEECTTTCCE------------EEEEECTTCCCBTTBSEEEEEE-------CTTHHHHCEEEEEEEC
T ss_pred CcEEEEEecCCEEEEEECCCCcE------------eeecccCceeecCCCCceeeEe-------ccccccCCEEEEEEec
Confidence 38777766689999988655431 122222 223456789999 663 44444322
Q ss_pred -CCCcEEEEECCCccee-eeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeC-------------CCc
Q 021036 155 -SDGSVRIWDGYIQELQ-KSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKG-------------SGS 219 (318)
Q Consensus 155 -~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~-------------dg~ 219 (318)
.++.|.-|.+..+... ..+...+ .++........+.-..|.|. |+|.++++.+. .|.
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~---~i~~~~p~~~~H~g~~l~fg-----pDG~Lyvt~Gd~~~~~~~qd~~~~~G~ 175 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPD---TVFRGIPKGVIHNGGRIAFG-----PDKMLYAGTGESGDTGLSQDRKSLGGK 175 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCE---EEEEEECCCSSCCCCCEEEC-----TTSCEEEECBCTTCGGGTTCTTCSTTC
T ss_pred CCCCEEEEEEeCCCCcccccCCCcE---EEEEcCCCCCCccCccccCC-----CCCCEEEEECCCCCCccccCCCCCCCE
Confidence 3445555555432110 0000000 00001111122345678998 89987777542 344
Q ss_pred EEEeeeccCCCe-------eeEeeeeecccCceeEEEEcCCCCEEEE
Q 021036 220 FDLWKCDISCNK-------FDKVGSYNAHDQVVTGLAWAFDGCCLYS 259 (318)
Q Consensus 220 i~vw~~~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s 259 (318)
|.-. +..... -..+.. .+|.. ...++|+|+|.++++
T Consensus 176 IlRi--~~dG~ip~~nPf~~~~i~a-~G~RN-p~Gla~dp~G~L~~~ 218 (347)
T 3das_A 176 ILRM--TPDGEPAPGNPFPGSPVYS-YGHRN-VQGLAWDDKQRLFAS 218 (347)
T ss_dssp EEEE--CTTSSBCTTCSSTTCCEEE-BCCSB-CCEEEECTTCCEEEE
T ss_pred EEEE--eCCCCccCCCCCCCCeEEe-eCCCC-cceEEECCCCCEEEE
Confidence 4443 433220 001221 24543 468999998876554
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.51 E-value=4.8 Score=32.65 Aligned_cols=106 Identities=6% Similarity=-0.002 Sum_probs=53.3
Q ss_pred CCCCcEEEEEeC-CCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEE
Q 021036 144 SNPQVLLVTGSS-DGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDL 222 (318)
Q Consensus 144 ~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~v 222 (318)
++.++.|+-.+. ...|...++..+.....+.. .. ...+. |++..|+-...++.-+|
T Consensus 153 ~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-----------------~~-~~~~~-----P~g~~iy~t~~~~~~~I 209 (302)
T 3s25_A 153 NTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC-----------------NC-YKPVV-----LDDTNVYYMDVNRDNAI 209 (302)
T ss_dssp EEETTEEEEECTTTCCEEEEETTTTEEEEEECS-----------------CE-EEEEE-----EETTEEEEEEGGGTTEE
T ss_pred eEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-----------------Cc-cceee-----ecCCEEEEEEcCCCcEE
Confidence 345555654443 56788878765543322211 11 12344 66766666554432445
Q ss_pred eeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEec--CCCcEEEEEecCCceeee
Q 021036 223 WKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCS--QDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 223 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~ 279 (318)
+..++.....+. +. ...+ ..|+|++.+|..++ ....|..-++.+.....+
T Consensus 210 ~~~~ldG~~~~~---Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l 261 (302)
T 3s25_A 210 VHVNINNPNPVV---LT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKEL 261 (302)
T ss_dssp EEECSSSCCCEE---CS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEE
T ss_pred EEEECCCCCeEE---Ee--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEe
Confidence 544555544222 22 1222 33778888777553 235566666655444333
No 337
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.76 E-value=13 Score=36.41 Aligned_cols=117 Identities=15% Similarity=0.058 Sum_probs=69.6
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeC-CCcEEEEE
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSS-DGSVRIWD 163 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~-d~~v~iwd 163 (318)
..++.+. .+.+.++.++.++. ...... .-...|.|+++.|.... ...+++++.|.. |++|+|++
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L------------~~~~~~-~l~~evscl~i~~~~~~-~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQEL------------RQISHT-EMEHEVACLDITPLGDS-NGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEE------------EEEEEE-ECSSCEEEEECCCCSSS-TTCCSEEEEEETTTTEEEEEE
T ss_pred CEEEEEE-CCEEEEEEeeCCce------------eeeccc-CCCCceEEEEeecCCCC-cccccEEEEEECCCCEEEEEE
Confidence 3455544 57788888876431 122222 22567999998443221 224579999997 99999999
Q ss_pred CCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCee
Q 021036 164 GYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKF 232 (318)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~ 232 (318)
+...+.+....... .....++.+... ....+|..|-.||.+.-+.+|..++..
T Consensus 589 L~~l~~~~~~~L~~-------------~~~p~si~l~~~---~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 589 LPSFELLHKEMLGG-------------EIIPRSILMTTF---ESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp TTTCCEEEEEECCS-------------SCCEEEEEEEEE---TTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred CCCCCeEEEEECCC-------------CCCCcEEEEEEe---CCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 98655443222111 012333433310 245678899999998888777666554
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.62 E-value=6.3 Score=32.47 Aligned_cols=108 Identities=8% Similarity=0.089 Sum_probs=68.1
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEe
Q 021036 144 SNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLW 223 (318)
Q Consensus 144 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw 223 (318)
+|..+.++.-. ..++.++|+++.+.++.+...+ +|.-=.|- +.+.|+..+ +..|+-|
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~~e---------------~VvfWkWi------s~~~L~lVT-~taVyHW 131 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD---------------DVTFWKWI------SLNTVALVT-DNAVYHW 131 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS---------------CEEEEEEC------SSSEEEEEE-SSEEEEE
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceecCC---------------ccEEEEec------CCCeEEEEc-CCcEEEE
Confidence 45556666655 6899999999988887765543 34333443 445555554 6689999
Q ss_pred eeccCCCeeeEeeeeeccc----CceeEEEEcCCCCEEEEec-------CCCcEEEEEecCCcee
Q 021036 224 KCDISCNKFDKVGSYNAHD----QVVTGLAWAFDGCCLYSCS-------QDNFVRSWIFHGNSLS 277 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~~ 277 (318)
+++-. .. ++..+..|. ..|.....+++.++++..+ -.|.+.+|....+...
T Consensus 132 s~~~~-s~--P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ 193 (365)
T 2xzh_A 132 SMEGE-SQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ 193 (365)
T ss_dssp ESSTT-CC--CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE
T ss_pred cccCC-CC--CceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc
Confidence 65432 22 454554443 4677777888888776443 2377888887654433
No 339
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.83 E-value=6.9 Score=32.46 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=11.9
Q ss_pred cEEEEecCCCcEEEEEcc
Q 021036 85 SILAVGGRSGKVSLWRIC 102 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~ 102 (318)
+.|+++...|.|++++..
T Consensus 30 ~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 30 HGMLITLRGGELRHWQAG 47 (353)
T ss_dssp CCEEEEETTTEEEEEETT
T ss_pred CEEEEEeCCceEEEEeCC
Confidence 723445567999988753
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.58 E-value=3.1 Score=34.45 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=42.7
Q ss_pred cEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeeccc-cccEEEEEeeeecCCCCCCCcEEEEE-eCCCcEEEE
Q 021036 85 SILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH-NSWITSISLAVLSSDSSNPQVLLVTG-SSDGSVRIW 162 (318)
Q Consensus 85 ~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~l~s~-~~d~~v~iw 162 (318)
.+++.++.||.|.-.|.++|+ .+-.++.. ..++....- | ....++..++.. +.||.|..+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~--------------~~W~~~~~~~~p~~~~~~-~---~~~~~~~~~vv~p~~dG~l~a~ 72 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGH--------------IIWSIEPENFQPLIEIQE-P---SRLETYETLIIEPFGDGNIYYF 72 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTE--------------EEEEECGGGSCCSEECCC-S---CTTTSSEEEEECCSTTTEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCc--------------EEEEecCCccCCcEEecC-C---ccccCCcEEEEEECCCCEEEEE
Confidence 588999999999999999865 33333332 122222221 0 001233344443 689999999
Q ss_pred ECCCcceeeee
Q 021036 163 DGYIQELQKSA 173 (318)
Q Consensus 163 d~~~~~~~~~~ 173 (318)
+..+|.....+
T Consensus 73 ~~~~G~~~~~~ 83 (339)
T 2be1_A 73 NAHQGLQKLPL 83 (339)
T ss_dssp ETTTEEEEEEE
T ss_pred ECCCCcEEeee
Confidence 99888554443
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.50 E-value=11 Score=33.55 Aligned_cols=82 Identities=13% Similarity=-0.033 Sum_probs=48.7
Q ss_pred cccCCCCCccEEEEec-CCCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEe
Q 021036 76 PQNGSSNWFSILAVGG-RSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGS 154 (318)
Q Consensus 76 ~~~~~s~~~~~l~~g~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~ 154 (318)
..+.++|+|+++++++ -+.++.+++++.-...-.... ............. .-.-...+| .++|....|-.
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~-~~~~~~~~ae~e~-GlGPlHt~F-------d~~G~aYTtlf 396 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL-ADPRDVIVGEPEL-GLGPLHTTF-------DGRGNAYTTLF 396 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC-SCGGGGEEECCBC-CSCEEEEEE-------CSSSEEEEEET
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc-cCcccceEeeccC-CCcccEEEE-------CCCCceEeeee
Confidence 4577888888876654 588899999984211000000 0000111222222 223456788 78886666777
Q ss_pred CCCcEEEEECCC
Q 021036 155 SDGSVRIWDGYI 166 (318)
Q Consensus 155 ~d~~v~iwd~~~ 166 (318)
-|..|.-|++..
T Consensus 397 idSqvvkWni~~ 408 (638)
T 3sbq_A 397 IDSQVVKWNMEE 408 (638)
T ss_dssp TTTEEEEEEHHH
T ss_pred ecceEEEEeccH
Confidence 899999999875
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.19 E-value=8.3 Score=31.71 Aligned_cols=59 Identities=8% Similarity=-0.028 Sum_probs=30.1
Q ss_pred CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecC------CCcEEEEEe--cCCceeee
Q 021036 218 GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQ------DNFVRSWIF--HGNSLSQV 279 (318)
Q Consensus 218 g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~--~~~~~~~~ 279 (318)
..+.+| |..+.++..+..+......-.+++. -++++++.|+. ...+.+||+ .+.....+
T Consensus 168 ~~v~~y--d~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 168 KFLLSF--DPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp CEEEEE--ETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred ccEEEE--eCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 356666 7778888776554321111022222 24566666664 245777876 45554443
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.47 E-value=3.7 Score=33.95 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=63.5
Q ss_pred CcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEE-eCCCcEEEeee
Q 021036 147 QVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVG-KGSGSFDLWKC 225 (318)
Q Consensus 147 ~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~-~~dg~i~vw~~ 225 (318)
+.+++.++.||.|.-.|..+|+....+..... .++....-. ..+.++..++.. +.||.++.+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~-------------~p~~~~~~~--~~~~~~~~~vv~p~~dG~l~a~-- 72 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENF-------------QPLIEIQEP--SRLETYETLIIEPFGDGNIYYF-- 72 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGS-------------CCSEECCCS--CTTTSSEEEEECCSTTTEEEEE--
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCcc-------------CCcEEecCC--ccccCCcEEEEEECCCCEEEEE--
Confidence 35789999999999999999999988765410 011000000 000133444443 578888887
Q ss_pred ccCCCeeeEeeeeec--ccCceeE---EEE-cC----CCCEEEEecCCCcEEEEEecCCcee
Q 021036 226 DISCNKFDKVGSYNA--HDQVVTG---LAW-AF----DGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 226 ~~~~~~~~~~~~~~~--h~~~v~~---~~~-~~----~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
+..++..+....... ...++.. ... .+ .+..+++|+.+|.+.-.|+++++..
T Consensus 73 ~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 73 NAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp ETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred ECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 555554221111111 1112211 000 00 3457888999999999998887664
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.44 E-value=11 Score=32.36 Aligned_cols=107 Identities=8% Similarity=0.088 Sum_probs=67.3
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEe
Q 021036 144 SNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLW 223 (318)
Q Consensus 144 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw 223 (318)
+|..+.++.-. ..++.++|+++.+.++.+...+ +|.-=.|- +.+.|+..+ +..|+-|
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~~e---------------~VvfWkWi------s~~~l~lVT-~taVyHW 130 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD---------------DVTFWKWI------SLNTVALVT-DNAVYHW 130 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS---------------CCCEEEEE------ETTEEEEEC-SSEEEEE
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceecCC---------------CceEEEec------CCCeEEEEc-CCeeEEe
Confidence 45555566554 6899999999988877765444 34333443 334555544 6689999
Q ss_pred eeccCCCeeeEeeeeecc----cCceeEEEEcCCCCEEEEec-------CCCcEEEEEecCCce
Q 021036 224 KCDISCNKFDKVGSYNAH----DQVVTGLAWAFDGCCLYSCS-------QDNFVRSWIFHGNSL 276 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~ 276 (318)
+++-. .. ++..+..| ...|.....+++.++++..+ -.|.+.+|....+..
T Consensus 131 si~~~-s~--P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s 191 (494)
T 1bpo_A 131 SMEGE-SQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS 191 (494)
T ss_dssp ESSSS-CC--CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE
T ss_pred cccCC-CC--chhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc
Confidence 65432 22 55555544 34677777889999876443 247788888765443
No 345
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.07 E-value=16 Score=30.69 Aligned_cols=210 Identities=11% Similarity=0.049 Sum_probs=109.5
Q ss_pred CcccccccCCCCCccEEEEe-c-C-------------CCcEEEEEccCC--ccccccccccCCceeEEeeecc------c
Q 021036 71 KKYPVPQNGSSNWFSILAVG-G-R-------------SGKVSLWRICVP--KCYSVEDCKVPTTAVLIGLFQA------H 127 (318)
Q Consensus 71 ~~~~v~~~~~s~~~~~l~~g-~-~-------------dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~------h 127 (318)
+...|..+.++..+.+.+.= + - --+|.+||+.++ +. ++.+.- .
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~l--------------i~~y~~p~~~~~~ 150 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPE--------------VVRYYFPTRLVEK 150 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCE--------------EEEEECCGGGCCC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCcee--------------EEEEECCHHhccc
Confidence 45567777776666655441 1 1 114778888886 43 232221 2
Q ss_pred cccEEEEEeeeecCC-CCCCCcEEEEEeCCCcEEEEECCCcceeeeeccccccccccee-eeee----cccceeEEEEee
Q 021036 128 NSWITSISLAVLSSD-SSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKE-VVTV----NTVPISVLSLIL 201 (318)
Q Consensus 128 ~~~v~~~~~~p~~~~-~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~v~~l~~~~ 201 (318)
...+..+++....+. ...++-..++=+..+.|.++|+.+++..........+- .... ...+ -...+..|+++
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gIaLs- 228 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGITLG- 228 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEEEEC-
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEEEec-
Confidence 356788888322111 01123223333457899999999987766553222111 0000 0011 12468888998
Q ss_pred ccCCCC----ceEEEEEeCCCcEEEeeec---cCCCee-eEeeeeeccc---CceeEEEEc-CCCCEEEEecCCCcEEEE
Q 021036 202 PVQSPR----LMLLAVGKGSGSFDLWKCD---ISCNKF-DKVGSYNAHD---QVVTGLAWA-FDGCCLYSCSQDNFVRSW 269 (318)
Q Consensus 202 ~~~~~~----~~~l~~~~~dg~i~vw~~~---~~~~~~-~~~~~~~~h~---~~v~~~~~~-~~~~~l~s~~~d~~v~iw 269 (318)
|+ ++.|.-....+. ++|.+. ++.... ..+.. .+.. ..-..++.+ .+|.++++--+...|..|
T Consensus 229 ----p~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~-~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w 302 (381)
T 3q6k_A 229 ----DRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPEL-LGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCW 302 (381)
T ss_dssp ----CCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEE-EEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEE
T ss_pred ----CCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEE-eeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEE
Confidence 66 566666554443 444332 122111 11111 1222 233456776 578778888888999999
Q ss_pred EecC-----CceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEEEE
Q 021036 270 IFHG-----NSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVVAM 315 (318)
Q Consensus 270 d~~~-----~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~~ 315 (318)
+..+ +....+...+.. ..+.++++.++|.+-+.
T Consensus 303 ~~~~~~~~~~n~~~l~~d~~l-------------~~pd~~~i~~~g~Lwv~ 340 (381)
T 3q6k_A 303 NTQKMPLRMKNTDVVYTSSRF-------------VFGTDISVDSKGGLWFM 340 (381)
T ss_dssp ETTSCSBCGGGEEEEEECTTC-------------CSEEEEEECTTSCEEEE
T ss_pred eCCCCccccCceEEEEECCCc-------------cccCeEEECCCCeEEEE
Confidence 9876 222333333321 25677888777765443
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.72 E-value=29 Score=33.28 Aligned_cols=39 Identities=21% Similarity=0.116 Sum_probs=31.9
Q ss_pred cEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 130 WITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 130 ~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
.+.++.. .++..++++-+.|+++|+|++.+++++.+...
T Consensus 237 ~~~~~~~-------~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIF-------LSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEee-------cCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 4566666 56777999999999999999999998877543
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.31 E-value=6.4 Score=34.98 Aligned_cols=74 Identities=12% Similarity=-0.050 Sum_probs=48.6
Q ss_pred eeEEEEeeccCCCCceEEEEEe-CCCcEEEeeeccC----CCe---e--eEeeeeecccCceeEEEEcCCCCEEEEecCC
Q 021036 194 ISVLSLILPVQSPRLMLLAVGK-GSGSFDLWKCDIS----CNK---F--DKVGSYNAHDQVVTGLAWAFDGCCLYSCSQD 263 (318)
Q Consensus 194 v~~l~~~~~~~~~~~~~l~~~~-~dg~i~vw~~~~~----~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 263 (318)
...+.++ |||++++.++ -+.++.+++++.- ..+ + ..+.+.+. .-.....+|+++|.-..+.-.|
T Consensus 325 PHGv~vs-----PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 325 PHGCNTS-----SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp CCCEEEC-----TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTT
T ss_pred CcceeeC-----CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeec
Confidence 3566777 9999888776 5788999965410 011 0 01222222 2345678999999656666789
Q ss_pred CcEEEEEecC
Q 021036 264 NFVRSWIFHG 273 (318)
Q Consensus 264 ~~v~iwd~~~ 273 (318)
..|..|++..
T Consensus 399 SqvvkWni~~ 408 (638)
T 3sbq_A 399 SQVVKWNMEE 408 (638)
T ss_dssp TEEEEEEHHH
T ss_pred ceEEEEeccH
Confidence 9999999864
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.65 E-value=7.1 Score=35.01 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=38.5
Q ss_pred eEEEEcCCCCEEEEecCC------------CcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCcEE
Q 021036 246 TGLAWAFDGCCLYSCSQD------------NFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNLVV 313 (318)
Q Consensus 246 ~~~~~~~~~~~l~s~~~d------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 313 (318)
=.|+|+|.|.++++-..+ ..+.+.+..++++..+...+... .+++++|+||++.|
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~ga-------------E~TG~~fspDg~tl 545 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC-------------EVTGISFSPDQKTL 545 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTC-------------EEEEEEECTTSSEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCc-------------cCcCeeECCCCCEE
Confidence 468999999866654322 23444455567777666555443 88999999999876
Q ss_pred EE
Q 021036 314 AM 315 (318)
Q Consensus 314 ~~ 315 (318)
.+
T Consensus 546 fv 547 (592)
T 3zwu_A 546 FV 547 (592)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.51 E-value=11 Score=32.78 Aligned_cols=54 Identities=7% Similarity=-0.101 Sum_probs=32.1
Q ss_pred ceeEEEEeeccCCCCce-EEEEEeCCCcEEEeeeccCCCe-eeEeeeee---------cccCceeEEEEcCC
Q 021036 193 PISVLSLILPVQSPRLM-LLAVGKGSGSFDLWKCDISCNK-FDKVGSYN---------AHDQVVTGLAWAFD 253 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~---------~h~~~v~~~~~~~~ 253 (318)
....|+|. |+|. .++++...|.|++++ ..... ...+..+. ........|+|+|+
T Consensus 15 ~P~~~a~~-----pdG~~rl~V~er~G~i~~~~--~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHS-----GDGSQRLFILEKEGYVKILT--PEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECC-----SSSSCCEEEEETTTEEEEEC--TTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEEC-----CCCCeEEEEEeCCceEEEEe--CCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 34678888 8985 455667789999984 22211 01111111 11356788999996
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=78.51 E-value=12 Score=33.35 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=38.8
Q ss_pred ceeEEEEcCCCCEEEEecC------------CCcEEEEEecCCceeeeecCCCCCCccccccCCCcceeeeEEEEcCCCc
Q 021036 244 VVTGLAWAFDGCCLYSCSQ------------DNFVRSWIFHGNSLSQVSIPTNTPGLQSCTDLPDAFVSCLGMAVSPGNL 311 (318)
Q Consensus 244 ~v~~~~~~~~~~~l~s~~~------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 311 (318)
....|.|+++|.+.++... ...|..++..++++..+...+.. ..+++++|+||++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-------------aEpnGiafSPD~k 543 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-------------CEVTGISFSPDQK 543 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-------------CEEEEEEECTTSS
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-------------ccccCCEECCCCC
Confidence 3457899999986663221 12455556556666665543432 2689999999998
Q ss_pred EEEEE
Q 021036 312 VVAMV 316 (318)
Q Consensus 312 ~l~~~ 316 (318)
.|.+.
T Consensus 544 tLfV~ 548 (592)
T 4a9v_A 544 TLFVG 548 (592)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77653
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.40 E-value=21 Score=34.19 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=28.6
Q ss_pred ceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 244 VVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 244 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
.+.+++..++..++++-+.|+++|+|++.++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeE
Confidence 4566777788889999999999999999987654
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=71.63 E-value=31 Score=34.74 Aligned_cols=107 Identities=8% Similarity=0.076 Sum_probs=65.5
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEe
Q 021036 144 SNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLW 223 (318)
Q Consensus 144 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw 223 (318)
+|..+.++.-. ..++.|+|+.+.+.++.+...+ +|.-=.|- +.+.|+..+ +..|+-|
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~~~e---------------~VvfWkWi------s~~~l~lVT-~~aVyHW 130 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD---------------DVTFWKWI------SLNTVALVT-DNAVYHW 130 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccccCC---------------CceEEEec------CCCeeEEEc-CCeEEEe
Confidence 34445555443 7899999999887776655433 33333342 344555544 5689999
Q ss_pred eeccCCCeeeEeeeeecc----cCceeEEEEcCCCCEEEEec-------CCCcEEEEEecCCce
Q 021036 224 KCDISCNKFDKVGSYNAH----DQVVTGLAWAFDGCCLYSCS-------QDNFVRSWIFHGNSL 276 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~ 276 (318)
+++. .. .|+..+..| ...|..-..+++.++++..| -.|.+.+|....+..
T Consensus 131 ~~~~-~s--~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s 191 (1630)
T 1xi4_A 131 SMEG-ES--QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS 191 (1630)
T ss_pred ccCC-CC--ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc
Confidence 5532 11 244444444 45677777888888776433 458899998865443
No 353
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.56 E-value=77 Score=29.18 Aligned_cols=162 Identities=9% Similarity=-0.012 Sum_probs=84.9
Q ss_pred ccccCCCCCccEEEEecCCCcEEEEEccCCccccccccccCCceeEEeeecc----ccccEEEEEeeeecCCCCCCCcEE
Q 021036 75 VPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQA----HNSWITSISLAVLSSDSSNPQVLL 150 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~p~~~~~~~~~~~l 150 (318)
|.++.-+.++++.+ |+. +-+..++.++++. ........ ....|.++.. ..++. |
T Consensus 375 v~~i~~d~~g~lWi-gt~-~GL~~~~~~~~~~------------~~~~~~~~~~~~~~~~v~~i~~-------d~~g~-l 432 (758)
T 3ott_A 375 IRHIYEDKEQQLWI-ATD-GSINRYDYATRQF------------IHYNIVDNTGTYNTNWTYYIFE-------DTAGQ-L 432 (758)
T ss_dssp EEEEEECTTSCEEE-EET-TEEEEEETTTTEE------------EEEEEECCC--CBSSSEEEEEE-------CTTSE-E
T ss_pred eEEEEECCCCCEEE-EeC-CcHhhcCcCCCcE------------EEeecCCCcCCCCCceEEEEEE-------cCCCC-E
Confidence 56666666676655 443 4588888876542 11111010 2346888877 66665 4
Q ss_pred EEEeCCCcEEEEECCCc-----ceee---eecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEE
Q 021036 151 VTGSSDGSVRIWDGYIQ-----ELQK---SAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDL 222 (318)
Q Consensus 151 ~s~~~d~~v~iwd~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~v 222 (318)
-.|+..+-|.++|..+. .... .+.... ......|.++... ++|.+.+.++..+-+..
T Consensus 433 WigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~----------~l~~~~i~~i~~d-----~~g~lWi~~~t~~Gl~~ 497 (758)
T 3ott_A 433 WISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHN----------GLSGMFINQIIPD-----NEGNVWVLLYNNKGIDK 497 (758)
T ss_dssp EEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGG----------TCSCSCEEEEEEC-----TTSCEEEEETTCSSEEE
T ss_pred EEEECCCceEEEccccccccCCcceeccccccccc----------ccccceeeeEEEc-----CCCCEEEEccCCCCcEE
Confidence 44666667888875431 1110 000000 0012247788877 78886653333344666
Q ss_pred eeeccCCCeeeEeeee-ecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 223 WKCDISCNKFDKVGSY-NAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 223 w~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
| +..+.++.....- ......+.++..+.+|.+.+. +.+ -+..|+..++...
T Consensus 498 ~--d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 498 I--NPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDESQQ 549 (758)
T ss_dssp E--ETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CCCC
T ss_pred E--eCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCceE
Confidence 6 6666654332110 001245778888888875544 344 4778887665443
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.28 E-value=8.3 Score=37.77 Aligned_cols=32 Identities=19% Similarity=0.091 Sum_probs=27.2
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 144 SNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 144 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
..+..++++-+.|+++|+|++.+++++.+...
T Consensus 246 ~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 246 LSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp ETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred cCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 45667999999999999999999998877543
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.49 E-value=22 Score=34.88 Aligned_cols=33 Identities=12% Similarity=0.008 Sum_probs=26.9
Q ss_pred eeEEEEcCCCCEEEEecCCCcEEEEEecCCcee
Q 021036 245 VTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLS 277 (318)
Q Consensus 245 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 277 (318)
+.+++..++..++++-+.|+++|+|++.++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 272 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeE
Confidence 445566677889999999999999999887654
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.35 E-value=12 Score=34.32 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=31.2
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecc
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEA 175 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 175 (318)
..|.++.+ +..++++-+.|.++|+|++.+++++.+...
T Consensus 222 ~~Is~~~~---------~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF---------HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE---------TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc---------CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35677666 356999999999999999999998877655
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.12 E-value=95 Score=26.78 Aligned_cols=30 Identities=17% Similarity=-0.001 Sum_probs=21.9
Q ss_pred ccEEEEEeeeecCCCCCCCc-EEEEEeCCCcEEEEECC
Q 021036 129 SWITSISLAVLSSDSSNPQV-LLVTGSSDGSVRIWDGY 165 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~-~l~s~~~d~~v~iwd~~ 165 (318)
..-+.|+| .+++. .|+++...|.|++++..
T Consensus 14 ~~P~~~a~-------~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALH-------SGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEEC-------CSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEE-------CCCCCeEEEEEeCCceEEEEeCC
Confidence 34578999 88885 45555678999999754
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.00 E-value=32 Score=31.60 Aligned_cols=32 Identities=9% Similarity=0.059 Sum_probs=24.7
Q ss_pred ccccCCCCCccEEEEecCCCcEEEEEccCCcccc
Q 021036 75 VPQNGSSNWFSILAVGGRSGKVSLWRICVPKCYS 108 (318)
Q Consensus 75 v~~~~~s~~~~~l~~g~~dg~i~iw~~~~~~~~~ 108 (318)
|.++.+ +..++++-+.|.++|+|+++++++..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEE
Confidence 444433 35799999999999999999987543
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.11 E-value=1.1e+02 Score=25.66 Aligned_cols=118 Identities=9% Similarity=0.072 Sum_probs=56.2
Q ss_pred cCCCcEEEEEccCCccccccccccCCceeEEeeeccc----cccEEEEEeeeecCCCCCC----CcEEEEEeCCCcEEEE
Q 021036 91 GRSGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAH----NSWITSISLAVLSSDSSNP----QVLLVTGSSDGSVRIW 162 (318)
Q Consensus 91 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~~~~----~~~l~s~~~d~~v~iw 162 (318)
...+-|.++|+.+++..++.+.....+....-.+.+. ...|..|+. +++ ++.|.-....+ -++|
T Consensus 178 ~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaL-------sp~~~~~~~~LYf~plss-~~ly 249 (381)
T 3q6k_A 178 FLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITL-------GDRDSEGNRPAYYLAGSA-IKVY 249 (381)
T ss_dssp TTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEE-------CCCCTTSCCEEEEEESSC-SEEE
T ss_pred CCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEe-------cCCcCCCCeEEEEEECCC-CcEE
Confidence 3467799999999887766553332221111122222 246888888 554 45555544433 2333
Q ss_pred ECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCceEEEEEeCCCcEEEee
Q 021036 163 DGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRLMLLAVGKGSGSFDLWK 224 (318)
Q Consensus 163 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~ 224 (318)
.+.+.-+... .. ...+..+.. .+....-..++++ +.+|.++++--....|..|+
T Consensus 250 ~V~T~~L~~~-~~-~~~v~~~G~--kg~~s~~~~~~~D----~~~G~ly~~~~~~~aI~~w~ 303 (381)
T 3q6k_A 250 SVNTKELKQK-GG-KLNPELLGN--RGKYNDAIALAYD----PKTKVIFFAEANTKQVSCWN 303 (381)
T ss_dssp EEEHHHHSST-TC-CCCCEEEEE--CCTTCCEEEEEEC----TTTCEEEEEESSSSEEEEEE
T ss_pred EEEHHHhhCc-ch-hhceEEeee--cCCCCCcceEEEe----CCCCeEEEEeccCCeEEEEe
Confidence 3322100000 00 000000000 0001122234553 14678888888889999994
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=50.96 E-value=68 Score=28.78 Aligned_cols=61 Identities=16% Similarity=0.120 Sum_probs=38.2
Q ss_pred eeEEEEeeccCCCCceEEEEEeCC----------CcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEe
Q 021036 194 ISVLSLILPVQSPRLMLLAVGKGS----------GSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSC 260 (318)
Q Consensus 194 v~~l~~~~~~~~~~~~~l~~~~~d----------g~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 260 (318)
.-.|+|+ +.|.+++.-..+ +.-.+|-.+..+++...+.+-. -...++.++|+||++.|+..
T Consensus 478 PDNL~fd-----~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFD-----KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEEC-----TTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEEC-----CCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 4568888 899877665432 2234444466666543332221 34678999999999877654
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.97 E-value=1.1e+02 Score=27.36 Aligned_cols=61 Identities=16% Similarity=0.145 Sum_probs=38.0
Q ss_pred ceeEEEEeeccCCCCceEEEEEeCC----------CcEEEeeeccCCCeeeEeeeeec-ccCceeEEEEcCCCCEEEEe
Q 021036 193 PISVLSLILPVQSPRLMLLAVGKGS----------GSFDLWKCDISCNKFDKVGSYNA-HDQVVTGLAWAFDGCCLYSC 260 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~l~~~~~d----------g~i~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~ 260 (318)
....|.|+ ++|.+.+..... +.=.+|-++..+++.+.+. .+ ....++.++|+||++.|+.+
T Consensus 477 sPDnL~fd-----~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl--~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFD-----KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM--VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEEC-----TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE--ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEEC-----CCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE--eCCCCccccCCEECCCCCEEEEE
Confidence 45688898 888877744321 1114444466666643332 22 23568999999999977665
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.14 E-value=1.4e+02 Score=24.75 Aligned_cols=69 Identities=10% Similarity=-0.058 Sum_probs=35.3
Q ss_pred ceeEEEEeeccCCC-C-ceEEEEEeCCCcEEEeeeccCCCeeeEeeeeec----------------ccCceeEEEEcCC-
Q 021036 193 PISVLSLILPVQSP-R-LMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNA----------------HDQVVTGLAWAFD- 253 (318)
Q Consensus 193 ~v~~l~~~~~~~~~-~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~----------------h~~~v~~~~~~~~- 253 (318)
.|.++++. | + ...+..+...+.|... +-....++.+..... ....+.+|.++|.
T Consensus 116 ~i~~l~~~-----~~~~~~~l~~g~~~ggl~~S--~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~ 188 (394)
T 3b7f_A 116 HVFWLTPG-----HASEPGTWYAGTSPQGLFRS--TDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRD 188 (394)
T ss_dssp EEEEEEEC-----CTTSTTCEEEEEETTEEEEE--SSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTC
T ss_pred ceeEEEeC-----CCCCCCEEEEEecCCcEEEE--cCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCC
Confidence 46677777 4 3 4555555556655554 333344544432111 1235778999884
Q ss_pred CCEEEEecCCCcEEE
Q 021036 254 GCCLYSCSQDNFVRS 268 (318)
Q Consensus 254 ~~~l~s~~~d~~v~i 268 (318)
...|..+..++.|..
T Consensus 189 ~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 189 PKHLYIGMSSGGVFE 203 (394)
T ss_dssp TTCEEEEEETBEEEE
T ss_pred CCEEEEEECCCCEEE
Confidence 334444444444433
No 363
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=42.02 E-value=2.1e+02 Score=26.27 Aligned_cols=121 Identities=12% Similarity=0.099 Sum_probs=67.0
Q ss_pred ccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCCcceeeeecccccccccceeeeeecccceeEEEEeeccCCCCc
Q 021036 129 SWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYIQELQKSAEAHCVPFSLLKEVVTVNTVPISVLSLILPVQSPRL 208 (318)
Q Consensus 129 ~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~ 208 (318)
..|.++.. ..++.+.+ ++.+ -|..++..+++... +...... ......|.++... +++
T Consensus 146 ~~i~~i~~-------d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~--------~~~~~~i~~i~~d-----~~~ 202 (758)
T 3ott_A 146 NTIYSIIR-------TKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHS--------SQSNLFVNSLLED-----TTR 202 (758)
T ss_dssp SCEEEEEE-------CTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCT--------TCSSCCEEEEEEE-----TTT
T ss_pred CeEEEEEE-------cCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCcc--------ccccceeEEEEEE-----CCC
Confidence 45788877 66666555 4444 47778876554321 1110000 0011247777777 666
Q ss_pred eEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEecCCceeee
Q 021036 209 MLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFHGNSLSQV 279 (318)
Q Consensus 209 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 279 (318)
..|..|+.. -+..| +..+.++.....+ ....|.++....+|.+.+. +. +-+.+++..++....+
T Consensus 203 ~~lWigt~~-Gl~~~--~~~~~~~~~~~~l--~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 203 QCVWIGTEG-YLFQY--FPSTGQIKQTEAF--HNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp TEEEEEEEE-EEEEE--ETTTTEEEEEEEE--EEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCCEEE
T ss_pred CEEEEEECC-CCeEE--cCCCCeEEeccCC--CCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcEEEE
Confidence 655566643 46666 5656554333332 2345888888888875543 33 4577888776655433
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=41.59 E-value=1.3e+02 Score=23.75 Aligned_cols=50 Identities=28% Similarity=0.350 Sum_probs=27.1
Q ss_pred CCcEEEEEccCCccccccccccCCceeEEeeeccccccEEEEEeeeecCCCCCCCcEEEEEeCCCcEEEEECCC
Q 021036 93 SGKVSLWRICVPKCYSVEDCKVPTTAVLIGLFQAHNSWITSISLAVLSSDSSNPQVLLVTGSSDGSVRIWDGYI 166 (318)
Q Consensus 93 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 166 (318)
||.|..|-......+ +.+ ......|..++. ... ..++. . ||.|..|-...
T Consensus 41 ~G~v~~wG~n~~Gql----------g~p----~~~~~~i~~ia~-------G~~-hs~~l-~-~G~v~~wG~n~ 90 (282)
T 3qhy_B 41 GGKVLGWGANLNGQL----------TMP----AATQSGVDAIAA-------GNY-HSLAL-K-DGEVIAWGGNE 90 (282)
T ss_dssp TTEEEEEECCSSSTT----------SCC----GGGGSCCCEEEE-------CSS-EEEEE-E-TTEEEEEECCT
T ss_pred CCEEEEEeCCCCCCC----------CCC----ccCCCCEEEEEe-------CCC-EEEEE-E-CCEEEEeeCCC
Confidence 899999976643211 100 111235666665 222 23333 4 89999997553
No 365
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=32.72 E-value=1.8e+02 Score=22.86 Aligned_cols=66 Identities=14% Similarity=-0.049 Sum_probs=34.7
Q ss_pred ceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeeeecccCceeEEEEcCCCCEEEEecCCCcEEEEEec
Q 021036 193 PISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYNAHDQVVTGLAWAFDGCCLYSCSQDNFVRSWIFH 272 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 272 (318)
.|..++.- ....++. .||.|+.|-.+....--.+. .....|..++-.... .++.. ||.|+.|-..
T Consensus 181 ~v~~i~~G------~~hs~al--~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~n 245 (282)
T 3qhy_B 181 GVDDVAGG------IFHSLAL--KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEWY-SLALK--NGKVIAWGSS 245 (282)
T ss_dssp SEEEEEEC------SSEEEEE--ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSSC-EEEEE--TTEEEEESTT
T ss_pred CeEEEEec------CCEEEEE--ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCCE-EEEEE--CCEEEEecCC
Confidence 56666654 3344444 49999999543222110011 112356666654443 33333 8999999654
Q ss_pred C
Q 021036 273 G 273 (318)
Q Consensus 273 ~ 273 (318)
.
T Consensus 246 ~ 246 (282)
T 3qhy_B 246 R 246 (282)
T ss_dssp C
T ss_pred C
Confidence 4
No 366
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=30.27 E-value=2.3e+02 Score=25.77 Aligned_cols=73 Identities=10% Similarity=0.029 Sum_probs=43.1
Q ss_pred ceeEEEEeeccCCCCc---eEEEEEeCCCcEEEeeeccCCCeeeEeeeee--cccCceeEEEEcCCC--CEEEEecCCCc
Q 021036 193 PISVLSLILPVQSPRL---MLLAVGKGSGSFDLWKCDISCNKFDKVGSYN--AHDQVVTGLAWAFDG--CCLYSCSQDNF 265 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~---~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~--~~l~s~~~d~~ 265 (318)
..+.|+...-.. .++ ..++.|..+|.|.=.- ...... ..+.++. ....+|..|.++++. .+|+.++.++.
T Consensus 398 ~~T~iaVd~v~~-~~~~~~tV~flGT~~G~l~Kvv-~~~~~~-~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V 474 (663)
T 1olz_A 398 NYTQIVVDRTQA-LDGTVYDVMFVSTDRGALHKAI-SLEHAV-HIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGV 474 (663)
T ss_dssp CEEEEEEEEEEC-TTSCEEEEEEEEETTSEEEEEE-ECSSSE-EEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCE
T ss_pred ceEEEEEEEEec-cCCCceEEEEEEcCCcEEEEEE-ecCCCc-eEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeE
Confidence 356666641111 233 4788899999875331 111221 1222222 245688999999987 88888888776
Q ss_pred EEE
Q 021036 266 VRS 268 (318)
Q Consensus 266 v~i 268 (318)
+++
T Consensus 475 ~~v 477 (663)
T 1olz_A 475 VQA 477 (663)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 367
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=28.80 E-value=1.9e+02 Score=25.28 Aligned_cols=75 Identities=7% Similarity=-0.022 Sum_probs=43.1
Q ss_pred ceeEEEEeeccCCCC--ceEEEEEeCCCcEEEeeeccCCC----eeeEeeeee--cccCceeEEEEcCCCCEEEEecCCC
Q 021036 193 PISVLSLILPVQSPR--LMLLAVGKGSGSFDLWKCDISCN----KFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDN 264 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~--~~~l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~ 264 (318)
..+.|+...-.. .+ -..++.|..+|.|.=.-...... ....+.++. ....+|..|.+++++.+|..++.++
T Consensus 405 ~lT~IaVd~v~~-~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDA-EDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEEC-SSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEcc-CCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCe
Confidence 456776652111 12 34788899999875331111111 111222222 2357899999999999999998887
Q ss_pred cEEE
Q 021036 265 FVRS 268 (318)
Q Consensus 265 ~v~i 268 (318)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=28.43 E-value=2.5e+02 Score=23.10 Aligned_cols=70 Identities=11% Similarity=-0.002 Sum_probs=34.8
Q ss_pred ceeEEEEeeccCCC-CceEEEEEeCCC----cEEEeeeccCCCeeeEeee---eec--------ccCceeEEEEcCC--C
Q 021036 193 PISVLSLILPVQSP-RLMLLAVGKGSG----SFDLWKCDISCNKFDKVGS---YNA--------HDQVVTGLAWAFD--G 254 (318)
Q Consensus 193 ~v~~l~~~~~~~~~-~~~~l~~~~~dg----~i~vw~~~~~~~~~~~~~~---~~~--------h~~~v~~~~~~~~--~ 254 (318)
.|.+|+++ | +...+.++...| .|... +-....++.+.. +.. ....|.+++++|. .
T Consensus 56 ~v~~i~~d-----p~~~~~l~~g~~~g~~g~gl~~s--~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 128 (394)
T 3b7f_A 56 TIHHIVQD-----PREPERMLMAARTGHLGPTVFRS--DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEP 128 (394)
T ss_dssp EEEEEEEC-----SSSTTCEEEEEEC--CCEEEEEE--SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTST
T ss_pred ceEEEEEC-----CCCCCeEEEEecCCCCCccEEEe--CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCC
Confidence 68889998 6 333344444444 44443 323334444322 111 1125778888872 3
Q ss_pred CEEEEecCCCcEEEE
Q 021036 255 CCLYSCSQDNFVRSW 269 (318)
Q Consensus 255 ~~l~s~~~d~~v~iw 269 (318)
..+..+...+.|...
T Consensus 129 ~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 129 GTWYAGTSPQGLFRS 143 (394)
T ss_dssp TCEEEEEETTEEEEE
T ss_pred CEEEEEecCCcEEEE
Confidence 445555555655443
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=27.30 E-value=1.8e+02 Score=25.71 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=43.4
Q ss_pred ceeEEEEeeccCCCCceEEEEEeCCCcEEEeeeccCCCeeeEeeee--ecccCcee-EEEEcCCCCEEEEecCCCcEEE
Q 021036 193 PISVLSLILPVQSPRLMLLAVGKGSGSFDLWKCDISCNKFDKVGSY--NAHDQVVT-GLAWAFDGCCLYSCSQDNFVRS 268 (318)
Q Consensus 193 ~v~~l~~~~~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~~h~~~v~-~~~~~~~~~~l~s~~~d~~v~i 268 (318)
.++.++.... .+-..++.|..+|.|.-..++........+.++ .....+|. .|.+++++.+|+.++.++.++|
T Consensus 401 ~lT~vav~~~---~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVY---NGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEE---TTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeecc---CCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3555555410 245678889999987654343222110122222 22346785 8999999999998887765554
No 370
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=24.75 E-value=1.2e+02 Score=18.11 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=24.4
Q ss_pred CceEEEEEeCCCcEEEeeeccCCCeeeEeeeee
Q 021036 207 RLMLLAVGKGSGSFDLWKCDISCNKFDKVGSYN 239 (318)
Q Consensus 207 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 239 (318)
..+.|+.-. +|.|+||.+|..+.+...+.++.
T Consensus 28 e~nhFgv~e-~g~iKIykyde~tNeI~LkKE~~ 59 (72)
T 3kvp_A 28 EHNHFGVME-DGYIKIYEYNESRNEVKLKKEYA 59 (72)
T ss_dssp STTEEEEEE-TTEEEEEEEETTTTEEEEEEEEE
T ss_pred cCCEEEEEe-CCEEEEEEeCCCCCeEEEEEeec
Confidence 456677776 99999999998888876666553
No 371
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.83 E-value=3.2e+02 Score=24.93 Aligned_cols=60 Identities=8% Similarity=0.050 Sum_probs=37.0
Q ss_pred eEEEEEeCCCcEE-EeeeccCCC---eeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCcEEE
Q 021036 209 MLLAVGKGSGSFD-LWKCDISCN---KFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNFVRS 268 (318)
Q Consensus 209 ~~l~~~~~dg~i~-vw~~~~~~~---~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 268 (318)
..++.|..+|.|. +........ ....+.++. ....+|..|.+++++..|..++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4788899999875 321111111 101122222 34568999999999999999988876655
No 372
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=23.05 E-value=3.4e+02 Score=24.33 Aligned_cols=60 Identities=10% Similarity=-0.013 Sum_probs=37.4
Q ss_pred eEEEEEeCCCcEEEeeeccCC--CeeeEeeeee--cccCceeEEEEcCCCCEEEEecCCCcEEE
Q 021036 209 MLLAVGKGSGSFDLWKCDISC--NKFDKVGSYN--AHDQVVTGLAWAFDGCCLYSCSQDNFVRS 268 (318)
Q Consensus 209 ~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 268 (318)
..++.|+.+|.|.-.-..... .....+.++. ....+|..+.++++...|..++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 578889999997643211111 0011222222 24568899999999888888887766655
Done!