Query 021039
Match_columns 318
No_of_seqs 254 out of 1613
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 11:51:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ayj_A 50S ribosomal protein L 69.6 2.3 8E-05 28.9 1.9 29 146-174 18-46 (56)
2 3j21_g 50S ribosomal protein L 68.8 2.8 9.5E-05 28.0 2.2 28 146-173 13-40 (51)
3 1wfk_A Zinc finger, FYVE domai 54.3 5.3 0.00018 29.6 1.7 25 146-170 8-34 (88)
4 2dkt_A Ring finger and CHY zin 52.0 5.9 0.0002 32.2 1.7 45 142-186 78-126 (143)
5 1x4u_A Zinc finger, FYVE domai 50.2 6.8 0.00023 28.5 1.7 24 147-170 14-39 (84)
6 1joc_A EEA1, early endosomal a 49.4 7.3 0.00025 30.8 1.9 25 147-171 69-95 (125)
7 1z2q_A LM5-1; membrane protein 48.7 7.8 0.00027 28.3 1.8 25 147-171 21-47 (84)
8 2yw8_A RUN and FYVE domain-con 47.8 7.9 0.00027 28.1 1.7 25 147-171 19-45 (82)
9 1dvp_A HRS, hepatocyte growth 45.1 7.6 0.00026 33.5 1.5 25 147-171 161-187 (220)
10 1vfy_A Phosphatidylinositol-3- 43.9 6.8 0.00023 27.8 0.8 24 148-171 12-37 (73)
11 1y02_A CARP2, FYVE-ring finger 37.6 8.7 0.0003 30.2 0.6 23 148-170 20-44 (120)
12 3zyq_A Hepatocyte growth facto 37.6 11 0.00039 32.7 1.4 25 147-171 164-190 (226)
13 3t7l_A Zinc finger FYVE domain 37.5 15 0.00051 27.1 1.9 25 147-171 20-46 (90)
14 3u5e_m 60S ribosomal protein L 31.3 21 0.00073 27.8 2.0 25 146-170 92-118 (128)
15 2dkt_A Ring finger and CHY zin 28.8 12 0.00042 30.3 0.1 34 146-179 97-136 (143)
16 2cr8_A MDM4 protein; ZF-ranbp 26.0 28 0.00097 23.1 1.4 21 149-169 13-33 (53)
17 1wfl_A Zinc finger protein 216 22.7 89 0.003 22.3 3.7 35 147-182 25-64 (74)
18 2c6a_A Ubiquitin-protein ligas 22.4 37 0.0013 22.0 1.4 22 148-169 14-35 (46)
19 2pg3_A Queuosine biosynthesis 22.1 21 0.0007 30.5 0.3 18 157-174 191-208 (232)
20 1tac_A TAT protein; transcript 21.4 29 0.001 25.4 0.9 13 148-167 25-37 (86)
21 1wff_A Riken cDNA 2810002D23 p 21.4 52 0.0018 24.2 2.3 34 147-181 25-64 (85)
22 3mpx_A FYVE, rhogef and PH dom 20.0 22 0.00075 33.4 0.0 23 147-169 375-399 (434)
No 1
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=69.57 E-value=2.3 Score=28.89 Aligned_cols=29 Identities=28% Similarity=0.641 Sum_probs=24.5
Q ss_pred ceeeccccccccCCCCccCCCCCcccccc
Q 021039 146 KLKYCRICKIFRPPRSCHCAVCDNCVEKF 174 (318)
Q Consensus 146 ~~~~C~tC~~~kP~Rs~HCs~C~~CV~r~ 174 (318)
..+.|..|...-|+|+.-|+.|+..-+|.
T Consensus 18 ~k~ICrkC~ARnp~~A~~CRKCg~~~LRp 46 (56)
T 2ayj_A 18 LKKVCRKCGALNPIRATKCRRCHSTNLRL 46 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCCCCEEE
T ss_pred chhhhccccCcCCcccccccCCCCCCCCc
Confidence 35899999999999999999998665543
No 2
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=68.78 E-value=2.8 Score=28.05 Aligned_cols=28 Identities=21% Similarity=0.329 Sum_probs=24.4
Q ss_pred ceeeccccccccCCCCccCCCCCccccc
Q 021039 146 KLKYCRICKIFRPPRSCHCAVCDNCVEK 173 (318)
Q Consensus 146 ~~~~C~tC~~~kP~Rs~HCs~C~~CV~r 173 (318)
..+.|..|...-|+++..|+.|+.--+|
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~~lr 40 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYKRLR 40 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred CCccCCCCCCcCCCCceecCCCCCcccc
Confidence 4689999999999999999999876554
No 3
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=54.27 E-value=5.3 Score=29.57 Aligned_cols=25 Identities=16% Similarity=0.346 Sum_probs=18.1
Q ss_pred ceeeccccccc--cCCCCccCCCCCcc
Q 021039 146 KLKYCRICKIF--RPPRSCHCAVCDNC 170 (318)
Q Consensus 146 ~~~~C~tC~~~--kP~Rs~HCs~C~~C 170 (318)
....|..|... --.|-|||+.|++-
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~v 34 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRA 34 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCE
Confidence 34678888753 34588999999873
No 4
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=51.98 E-value=5.9 Score=32.23 Aligned_cols=45 Identities=29% Similarity=0.705 Sum_probs=32.3
Q ss_pred ccccceeeccccccccCCC-CccCCCCCcccccc--c-ccccccccccc
Q 021039 142 GVEMKLKYCRICKIFRPPR-SCHCAVCDNCVEKF--D-HHCPWIGQCIA 186 (318)
Q Consensus 142 g~~~~~~~C~tC~~~kP~R-s~HCs~C~~CV~r~--D-HHC~Wl~nCVG 186 (318)
|......||..|+.+.+.+ .+||..||-|..+- | -||.--|-|+.
T Consensus 78 g~~f~~Y~C~~C~l~d~~k~~yHC~~CgiCR~G~~~~ffHC~~C~~C~s 126 (143)
T 2dkt_A 78 STLFGEYYCSICHLFDKDKRQYHCESCGICRIGPKEDFFHCLKCNLCLT 126 (143)
T ss_dssp CCBSCSEECSSSCCEECSSSEEEETTTTEEEESCGGGEEEETTTTEEEE
T ss_pred CccceeeEeceeecccCCCceecCCCCCceeccCCcCcEECCcCCeeec
Confidence 4445567999999886654 68888888888862 2 27777777754
No 5
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.18 E-value=6.8 Score=28.55 Aligned_cols=24 Identities=21% Similarity=0.501 Sum_probs=17.1
Q ss_pred eeeccccccc--cCCCCccCCCCCcc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNC 170 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~C 170 (318)
...|..|... --.|-|||+.|++-
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~v 39 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNS 39 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCE
T ss_pred CCcCcCcCCccccchhhhhhcCCCcE
Confidence 4577777742 34588999999873
No 6
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=49.42 E-value=7.3 Score=30.75 Aligned_cols=25 Identities=28% Similarity=0.578 Sum_probs=17.9
Q ss_pred eeeccccccc--cCCCCccCCCCCccc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
...|..|... --.|-|||+.||+-+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vf 95 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIF 95 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CCCCcCcCCccccccccccCCCCCeEE
Confidence 4578888753 345889999998743
No 7
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=48.70 E-value=7.8 Score=28.27 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=17.9
Q ss_pred eeeccccccc--cCCCCccCCCCCccc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
...|..|... --.|-|||+.|++-+
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~ 47 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVL 47 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEE
T ss_pred CCCCcCcCCccccchhcccccCCCcEE
Confidence 4678888743 235889999998743
No 8
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=47.75 E-value=7.9 Score=28.10 Aligned_cols=25 Identities=28% Similarity=0.598 Sum_probs=17.5
Q ss_pred eeeccccccc--cCCCCccCCCCCccc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
...|..|... --.|-|||+.||+-+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~ 45 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIF 45 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred CCcccCcCCcccCccccccCCCCCCEE
Confidence 4578888742 235889999998743
No 9
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=45.08 E-value=7.6 Score=33.49 Aligned_cols=25 Identities=24% Similarity=0.626 Sum_probs=18.1
Q ss_pred eeeccccccc--cCCCCccCCCCCccc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
...|..|... ---|-|||+.||+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~ 187 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVF 187 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CCccCCCCCccCCcccccccCCcCCEE
Confidence 3688888743 235889999998744
No 10
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=43.94 E-value=6.8 Score=27.77 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=17.0
Q ss_pred eeccccccc--cCCCCccCCCCCccc
Q 021039 148 KYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 148 ~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
..|..|... --.|-|||+.||+-+
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~ 37 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVF 37 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred CcccCCCCccCCccccccCCCCCEEE
Confidence 467777742 335889999999843
No 11
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=37.61 E-value=8.7 Score=30.25 Aligned_cols=23 Identities=22% Similarity=0.589 Sum_probs=16.5
Q ss_pred eeccccccc--cCCCCccCCCCCcc
Q 021039 148 KYCRICKIF--RPPRSCHCAVCDNC 170 (318)
Q Consensus 148 ~~C~tC~~~--kP~Rs~HCs~C~~C 170 (318)
..|..|... --.|-|||+.||+.
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~i 44 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKN 44 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCE
T ss_pred CcccCcCCccccccccccCCCCCCe
Confidence 567777742 23588999999883
No 12
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=37.55 E-value=11 Score=32.65 Aligned_cols=25 Identities=24% Similarity=0.656 Sum_probs=17.2
Q ss_pred eeeccccccc--cCCCCccCCCCCccc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
...|..|... ---|-|||+.||+.+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~ 190 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIF 190 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEE
T ss_pred CCCCcCcCCCCCccccccccCCCcCEe
Confidence 3578888732 233789999998743
No 13
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=37.54 E-value=15 Score=27.13 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=17.3
Q ss_pred eeeccccccc--cCCCCccCCCCCccc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDNCV 171 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~CV 171 (318)
...|..|... --.|-|||+.||+-+
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~ 46 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVF 46 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEE
T ss_pred CCcCcCCCCcccchhhCccccCCCCEE
Confidence 4578888742 234789999998743
No 14
>3u5e_m 60S ribosomal protein L40; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_m 4b6a_m 4a18_K 4a19_K 4a1b_K 4a1d_K 4adx_5 3izc_p 3izs_p 3iz5_p 3izr_p
Probab=31.29 E-value=21 Score=27.76 Aligned_cols=25 Identities=32% Similarity=0.772 Sum_probs=21.7
Q ss_pred ceeeccccccccCCCCccCCC--CCcc
Q 021039 146 KLKYCRICKIFRPPRSCHCAV--CDNC 170 (318)
Q Consensus 146 ~~~~C~tC~~~kP~Rs~HCs~--C~~C 170 (318)
..+.|..|...-|+|+..|+. |+..
T Consensus 92 ~~~ic~~~~~~~~~~~~~~~~~~c~~~ 118 (128)
T 3u5e_m 92 DKSVCRKCYARLPPRATNCRKRKCGHT 118 (128)
T ss_dssp SCEEETTTCCEECTTCSSCSCTTTTSC
T ss_pred ceEeeccccccCCchhhccchhhCCCc
Confidence 358999999999999999994 8764
No 15
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=28.84 E-value=12 Score=30.33 Aligned_cols=34 Identities=26% Similarity=0.600 Sum_probs=22.6
Q ss_pred ceeeccccc---cccCCCCccCCCCCccccc--cc-cccc
Q 021039 146 KLKYCRICK---IFRPPRSCHCAVCDNCVEK--FD-HHCP 179 (318)
Q Consensus 146 ~~~~C~tC~---~~kP~Rs~HCs~C~~CV~r--~D-HHC~ 179 (318)
..-+|..|. +-...--.||..||.|+.. .| |.|.
T Consensus 97 ~~yHC~~CgiCR~G~~~~ffHC~~C~~C~s~~l~~~H~C~ 136 (143)
T 2dkt_A 97 RQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCI 136 (143)
T ss_dssp SEEEETTTTEEEESCGGGEEEETTTTEEEEGGGSSSSCCS
T ss_pred ceecCCCCCceeccCCcCcEECCcCCeeeccccCcCcccC
Confidence 345565555 4444558999999999654 44 7775
No 16
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=25.98 E-value=28 Score=23.05 Aligned_cols=21 Identities=33% Similarity=0.691 Sum_probs=16.4
Q ss_pred eccccccccCCCCccCCCCCc
Q 021039 149 YCRICKIFRPPRSCHCAVCDN 169 (318)
Q Consensus 149 ~C~tC~~~kP~Rs~HCs~C~~ 169 (318)
.|..|+..-||--.||..|-.
T Consensus 13 kC~~C~k~N~Pl~ryC~rCwa 33 (53)
T 2cr8_A 13 QCTECKKFNSPSKRYCFRCWA 33 (53)
T ss_dssp ECSSSCCEECSSCCBCTTTCC
T ss_pred ecccccccCCCccchhHHHHH
Confidence 588888888888888877743
No 17
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.68 E-value=89 Score=22.30 Aligned_cols=35 Identities=26% Similarity=0.604 Sum_probs=21.9
Q ss_pred eeeccccccccCCCCccCCCCCc--ccc-c--ccccccccc
Q 021039 147 LKYCRICKIFRPPRSCHCAVCDN--CVE-K--FDHHCPWIG 182 (318)
Q Consensus 147 ~~~C~tC~~~kP~Rs~HCs~C~~--CV~-r--~DHHC~Wl~ 182 (318)
...|.+|+...-.=...|+ |+. |-. | =||.|++--
T Consensus 25 ~nRC~~CrKkvgL~gf~Cr-Cg~~FCs~HRy~e~H~C~fDy 64 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCR-CGNLFCGLHRYSDKHNCPYDY 64 (74)
T ss_dssp TTBCSSSCCBCGGGCEECT-TSCEECSSSCSTTTTTCCCCG
T ss_pred CCcChhhCCcccccCeecC-CCCEechhcCCCccCCCcchh
Confidence 3579999865333357888 775 222 2 288888643
No 18
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=22.38 E-value=37 Score=22.01 Aligned_cols=22 Identities=32% Similarity=0.759 Sum_probs=17.3
Q ss_pred eeccccccccCCCCccCCCCCc
Q 021039 148 KYCRICKIFRPPRSCHCAVCDN 169 (318)
Q Consensus 148 ~~C~tC~~~kP~Rs~HCs~C~~ 169 (318)
=.|..|+..-||--.||..|-.
T Consensus 14 WkC~~C~~~N~Pl~r~C~rCw~ 35 (46)
T 2c6a_A 14 WKCTSCNEMNPPLPSHCNRCWA 35 (46)
T ss_dssp EECTTTCCEECSSCSSCTTTCC
T ss_pred EecccccccCCCccchhhHHHh
Confidence 4699999888888888877743
No 19
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=22.06 E-value=21 Score=30.52 Aligned_cols=18 Identities=17% Similarity=0.429 Sum_probs=14.4
Q ss_pred cCCCCccCCCCCcccccc
Q 021039 157 RPPRSCHCAVCDNCVEKF 174 (318)
Q Consensus 157 kP~Rs~HCs~C~~CV~r~ 174 (318)
.+.|..||..|+.|++|.
T Consensus 191 ~~~~~~~CG~C~~C~~r~ 208 (232)
T 2pg3_A 191 NGIKGDGCGQCAACHLRA 208 (232)
T ss_dssp TSCCTTTTSCSHHHHHHH
T ss_pred CCCCCCcCCcCHhHHHHH
Confidence 455568999999999884
No 20
>1tac_A TAT protein; transcription regulation, HIV-1, transactivation, RNA binding, structure; NMR {Human immunodeficiency virus 1} SCOP: j.40.1.1
Probab=21.45 E-value=29 Score=25.43 Aligned_cols=13 Identities=15% Similarity=0.232 Sum_probs=9.2
Q ss_pred eeccccccccCCCCccCCCC
Q 021039 148 KYCRICKIFRPPRSCHCAVC 167 (318)
Q Consensus 148 ~~C~tC~~~kP~Rs~HCs~C 167 (318)
-||..| ++||.+|
T Consensus 25 CyCKkC-------c~HCq~C 37 (86)
T 1tac_A 25 AHAKKS-------AYHSQVA 37 (86)
T ss_dssp SSTTTT-------TTTCCCS
T ss_pred ceecch-------hhhhhHH
Confidence 577776 5788776
No 21
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=21.44 E-value=52 Score=24.17 Aligned_cols=34 Identities=29% Similarity=0.661 Sum_probs=23.4
Q ss_pred eeeccccccccCC-CCccCCCCCc--cccc---cccccccc
Q 021039 147 LKYCRICKIFRPP-RSCHCAVCDN--CVEK---FDHHCPWI 181 (318)
Q Consensus 147 ~~~C~tC~~~kP~-Rs~HCs~C~~--CV~r---~DHHC~Wl 181 (318)
...|..|+..-.. -..+|+ |+. |-.- -||.|++-
T Consensus 25 ~~rC~~C~kkvgl~~~f~Cr-Cg~~FC~~HRy~e~H~C~fD 64 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECR-CGNNFCASHRYAEAHGCNYD 64 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECT-TCCEECTTTCSTGGGTCCSC
T ss_pred CccchhhCCeecccCCeEcC-CCCEecccCCCccCCCCcch
Confidence 4689999876665 368886 765 4333 48999864
No 22
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=20.03 E-value=22 Score=33.37 Aligned_cols=23 Identities=26% Similarity=0.580 Sum_probs=0.0
Q ss_pred eeeccccccc--cCCCCccCCCCCc
Q 021039 147 LKYCRICKIF--RPPRSCHCAVCDN 169 (318)
Q Consensus 147 ~~~C~tC~~~--kP~Rs~HCs~C~~ 169 (318)
...|..|... --.|-|||+.||+
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~ 399 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGK 399 (434)
T ss_dssp -------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcC
Confidence 3567777642 2236788888876
Done!