BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021040
MTSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG
AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS
TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY
AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR
ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF
IVSILLQVISLKLYSMHT

High Scoring Gene Products

Symbol, full name Information P value
AT2G44280 protein from Arabidopsis thaliana 9.1e-116
AT3G60070 protein from Arabidopsis thaliana 1.5e-113
MFSD12
Major facilitator superfamily domain-containing protein 12
protein from Homo sapiens 1.4e-37
Mfsd12
major facilitator superfamily domain containing 12
protein from Mus musculus 2.0e-37
mfsd12a
major facilitator superfamily domain containing 12a
gene_product from Danio rerio 1.0e-35
F16H11.1 gene from Caenorhabditis elegans 1.2e-25

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021040
        (318 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2050626 - symbol:AT2G44280 "AT2G44280" species...  1141  9.1e-116  1
TAIR|locus:2101442 - symbol:AT3G60070 "AT3G60070" species...  1120  1.5e-113  1
UNIPROTKB|Q6NUT3 - symbol:MFSD12 "Major facilitator super...   274  1.4e-37   2
MGI|MGI:3604804 - symbol:Mfsd12 "major facilitator superf...   275  2.0e-37   2
ZFIN|ZDB-GENE-030131-4642 - symbol:mfsd12a "major facilit...   274  1.0e-35   2
WB|WBGene00017530 - symbol:F16H11.1 species:6239 "Caenorh...   295  1.2e-25   1


>TAIR|locus:2050626 [details] [associations]
            symbol:AT2G44280 "AT2G44280" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR016196 SUPFAM:SSF103473
            EMBL:AY128290 EMBL:BT002653 IPI:IPI00545135 RefSeq:NP_001078055.1
            RefSeq:NP_181957.2 UniGene:At.36778 ProteinModelPortal:Q8L7S2
            IntAct:Q8L7S2 EnsemblPlants:AT2G44280.1 EnsemblPlants:AT2G44280.2
            GeneID:819036 KEGG:ath:AT2G44280 TAIR:At2g44280
            HOGENOM:HOG000239767 InParanoid:Q8L7S2 OMA:MELDSTI PhylomeDB:Q8L7S2
            ProtClustDB:CLSN2693570 Genevestigator:Q8L7S2 Uniprot:Q8L7S2
        Length = 462

 Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
 Identities = 213/309 (68%), Positives = 252/309 (81%)

Query:     1 MTSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG 60
             MTSS ++  + E +D  T+P+GR SV YYG GHMLNDITA+CWFTYLLLFLT IGLSPR 
Sbjct:     1 MTSSVIVGMEEEEEDPSTKPLGRLSVFYYGVGHMLNDITASCWFTYLLLFLTQIGLSPRD 60

Query:    61 AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTS 120
             AA VMLSGQ+ADGFATIFIGELIDRFGHFKIWH                 C+PC +L  +
Sbjct:    61 AAIVMLSGQVADGFATIFIGELIDRFGHFKIWHAAGSLLVAISFSSVFGGCLPCSLLHNN 120

Query:   121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180
             +  +ET+SY +FAAIFN+GWAATQV+HM+MVNCITLNSTSRV LTS RNAF+MVANL LY
Sbjct:   121 SSTIETLSYSMFAAIFNIGWAATQVSHMAMVNCITLNSTSRVALTSSRNAFSMVANLGLY 180

Query:   181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR 240
             AIA +VF VS A T  + E+QYRWIAYSSI +GCCFV IFL  T+EPRL++ LR  S AR
Sbjct:   181 AIALVVFGVSEAVTKENTESQYRWIAYSSITVGCCFVVIFLMGTKEPRLRINLRETSRAR 240

Query:   241 ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 300
             I W+YWF+KILYYQVA+VY+LTRLV+NVSQAYLAF+VI+DL+M QSAKAL+PAIIY+CSF
Sbjct:   241 IPWSYWFRKILYYQVAMVYLLTRLVLNVSQAYLAFFVIDDLQMAQSAKALIPAIIYVCSF 300

Query:   301 IVSILLQVI 309
             +VS++LQ I
Sbjct:   301 VVSVMLQEI 309


>TAIR|locus:2101442 [details] [associations]
            symbol:AT3G60070 "AT3G60070" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR016196
            SUPFAM:SSF103473 eggNOG:NOG263455 OMA:CARYGPR HOGENOM:HOG000239767
            ProtClustDB:CLSN2693570 EMBL:AY123977 IPI:IPI00527851
            RefSeq:NP_191566.5 UniGene:At.1176 ProteinModelPortal:Q8L7Z7
            EnsemblPlants:AT3G60070.1 GeneID:825177 KEGG:ath:AT3G60070
            TAIR:At3g60070 InParanoid:Q8L7Z7 PhylomeDB:Q8L7Z7
            Genevestigator:Q8L7Z7 Uniprot:Q8L7Z7
        Length = 458

 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 211/296 (71%), Positives = 240/296 (81%)

Query:    14 DDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADG 73
             +D FT+P+GRWSV +YG GHMLNDITA+CWFTYLLLFLT IGLSPR AA VMLSGQ+AD 
Sbjct:     7 EDPFTKPIGRWSVFFYGVGHMLNDITASCWFTYLLLFLTQIGLSPRDAAIVMLSGQVADA 66

Query:    74 FATIFIGELIDRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFA 133
             FATIF GELIDRFGHFKIWH                 C+PC IL   +L +ET SY +FA
Sbjct:    67 FATIFTGELIDRFGHFKIWHAAGSLLVAISFSSVFGGCLPCSILHNDSLTLETFSYSMFA 126

Query:   134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193
             AIFN+GWAATQV+HM+MVNCI+LNSTSRV LTS RNAFTMVANL LYAIA +VF V  A 
Sbjct:   127 AIFNIGWAATQVSHMAMVNCISLNSTSRVALTSSRNAFTMVANLGLYAIALVVFGVIKAG 186

Query:   194 THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYY 253
             +  D E QYRWIAYSSI IGCCFV IFL  T+EPRL++ L+  S ARI W YWF+KILYY
Sbjct:   187 SKEDTETQYRWIAYSSITIGCCFVVIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYY 246

Query:   254 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQVI 309
             QVA+VY+LTRLV+NVSQAYLAF+VI+DL+M QSAKALVPAIIYICSF+VS+LLQ I
Sbjct:   247 QVAMVYLLTRLVLNVSQAYLAFFVIDDLQMDQSAKALVPAIIYICSFVVSVLLQEI 302


>UNIPROTKB|Q6NUT3 [details] [associations]
            symbol:MFSD12 "Major facilitator superfamily
            domain-containing protein 12" species:9606 "Homo sapiens"
            [GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] GO:GO:0016021 GO:GO:0006810
            InterPro:IPR016196 SUPFAM:SSF103473 EMBL:CH471139 PROSITE:PS50850
            EMBL:BC036706 EMBL:BC068439 IPI:IPI00166640 IPI:IPI00783894
            RefSeq:NP_001036145.1 RefSeq:NP_068377.2 RefSeq:NP_778148.2
            UniGene:Hs.656901 ProteinModelPortal:Q6NUT3 DMDM:125991816
            PaxDb:Q6NUT3 PRIDE:Q6NUT3 Ensembl:ENST00000355415 GeneID:126321
            KEGG:hsa:126321 UCSC:uc002lxx.3 UCSC:uc002lxy.3 CTD:126321
            GeneCards:GC19M003539 HGNC:HGNC:28299 neXtProt:NX_Q6NUT3
            PharmGKB:PA134955537 eggNOG:NOG263455 HOGENOM:HOG000006540
            HOVERGEN:HBG056517 PhylomeDB:Q6NUT3 ChiTaRS:MFSD12
            GenomeRNAi:126321 NextBio:81773 ArrayExpress:Q6NUT3 Bgee:Q6NUT3
            CleanEx:HS_C19orf28 Genevestigator:Q6NUT3 Uniprot:Q6NUT3
        Length = 480

 Score = 274 (101.5 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
 Identities = 61/176 (34%), Positives = 93/176 (52%)

Query:    19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATI 77
             +P+   + L Y  GH LND+ A+ WFTYLLL+L  +   S RGA  ++L GQ+ADG  T 
Sbjct:    15 RPLSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTP 74

Query:    78 FIGELIDR-------FGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYC 130
              +G   DR       +G  K WH                 C+ C   +     +  + Y 
Sbjct:    75 LVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAAL--LYYG 132

Query:   131 VFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186
              F  IF  GWA+TQ++H+S++  +  N   +V LT+ R AFT+VAN+++Y  A+++
Sbjct:   133 PFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLL 188

 Score = 155 (59.6 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
 Identities = 30/88 (34%), Positives = 53/88 (60%)

Query:   225 EEPRLKMGLRGNSHAR--ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 282
             EEP     L   + A+  + W +W ++  +YQV ++YM TRL+VN+SQ Y+A Y+   L 
Sbjct:   248 EEPGEHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLH 307

Query:   283 MGQSAKALVPAIIYICSFIVSILLQVIS 310
             + +   A +P ++Y+  F+ S L++ I+
Sbjct:   308 LPKKFIATIPLVMYLSGFLSSFLMKPIN 335


>MGI|MGI:3604804 [details] [associations]
            symbol:Mfsd12 "major facilitator superfamily domain
            containing 12" species:10090 "Mus musculus" [GO:0003674
            "molecular_function" evidence=ND] [GO:0006810 "transport"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] MGI:MGI:3604804 GO:GO:0016021
            GO:GO:0006810 InterPro:IPR016196 SUPFAM:SSF103473 PROSITE:PS50850
            CTD:126321 eggNOG:NOG263455 HOGENOM:HOG000006540 HOVERGEN:HBG056517
            EMBL:AK149678 EMBL:AK154386 EMBL:AK154902 EMBL:AK171084
            EMBL:BC118620 EMBL:BC119790 IPI:IPI00654076 RefSeq:NP_082933.2
            UniGene:Mm.182281 ProteinModelPortal:Q3U481 PRIDE:Q3U481
            DNASU:73822 Ensembl:ENSMUST00000044844 GeneID:73822 KEGG:mmu:73822
            UCSC:uc007gho.1 GeneTree:ENSGT00390000016464 InParanoid:Q3U481
            OMA:CARYGPR OrthoDB:EOG4W3SN4 NextBio:339129 Bgee:Q3U481
            CleanEx:MM_F630110N24RIK Genevestigator:Q3U481 Uniprot:Q3U481
        Length = 476

 Score = 275 (101.9 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
 Identities = 62/177 (35%), Positives = 91/177 (51%)

Query:    27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
             L +  GH LND+ A  WFTYLLLFL  + G S RGA  ++L GQ+ADG  T  +G   DR
Sbjct:    22 LSFAVGHFLNDLCAGMWFTYLLLFLHSVRGYSSRGAGLLLLLGQVADGLCTPLVGYEADR 81

Query:    86 F-----GHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVGW 140
                   G  K WH                 C+ C   +     +  + Y  F  +F  GW
Sbjct:    82 ASCVRCGPRKAWHLAGTVCVLLSFPFIFSPCLGCGEATPEWAAL--LYYGPFIVVFQFGW 139

Query:   141 AATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197
             AATQ+AH+S++  +  +   +V LT+ R AFT+VAN+++Y  A+++  +     H +
Sbjct:   140 AATQIAHLSLIPELVTSDHEKVELTALRYAFTVVANITVYGAAWLLLHLQ-GSAHGE 195

 Score = 152 (58.6 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
 Identities = 24/71 (33%), Positives = 46/71 (64%)

Query:   243 WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIV 302
             W +W ++  +YQV ++YM TRL+VN+SQ Y+A Y+   L + +   A +P ++Y+  F  
Sbjct:   264 WKHWLREPAFYQVGMLYMTTRLIVNLSQTYIAMYLTYSLSLPKKFIATIPLVMYLSGFFS 323

Query:   303 SILLQVISLKL 313
             S L++ ++ ++
Sbjct:   324 SFLMKPVNRRI 334


>ZFIN|ZDB-GENE-030131-4642 [details] [associations]
            symbol:mfsd12a "major facilitator superfamily
            domain containing 12a" species:7955 "Danio rerio" [GO:0003674
            "molecular_function" evidence=ND] ZFIN:ZDB-GENE-030131-4642
            InterPro:IPR016196 SUPFAM:SSF103473 eggNOG:COG2211
            HOGENOM:HOG000006540 HOVERGEN:HBG056517 OrthoDB:EOG4W3SN4
            EMBL:BC128826 IPI:IPI00481376 UniGene:Dr.80044 InParanoid:A1A5V3
            ArrayExpress:A1A5V3 Uniprot:A1A5V3
        Length = 507

 Score = 274 (101.5 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
 Identities = 71/214 (33%), Positives = 105/214 (49%)

Query:    27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85
             L Y  GH LND+ A+ WFTYLL+F   + G     A  ++L GQIADG  T  IG   DR
Sbjct:    15 LSYSVGHFLNDLCASMWFTYLLVFYHSVLGFENTYAGVLLLVGQIADGVCTPLIGYESDR 74

Query:    86 ------FGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVG 139
                   +G  K WH                 C+ C  L+T    V    +  F  IF  G
Sbjct:    75 TPGCGSYGKRKTWHLVGTISVLLSFPFIFNQCLGCD-LNTPQW-VSVTYFAPFIIIFQFG 132

Query:   140 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199
             WAATQ++H+S++  +      +V LT+ R AFT++AN+++YA+A+++F        A ++
Sbjct:   133 WAATQISHLSLIPELVSCEHEKVELTAYRYAFTVIANITVYAVAWLLFHFQEGDDPAVMD 192

Query:   200 NQ-------YRWIAYSSIFIGCCFVGIFLSRTEE 226
             N        +R ++   + IG  F  +F   T E
Sbjct:   193 NLGSVDIPVFRNLSLIVVGIGAVFTFLFHLGTRE 226

 Score = 139 (54.0 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
 Identities = 24/70 (34%), Positives = 45/70 (64%)

Query:   241 ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 300
             + W  W  +  +YQVAL+YM TRL+VN+SQ Y++ Y+   L + ++  A +P ++++  F
Sbjct:   258 LHWNNWLTQPSFYQVALLYMSTRLIVNLSQTYISMYLTYTLLLPKNYIATIPLVMFLSGF 317

Query:   301 IVSILLQVIS 310
               S +++ +S
Sbjct:   318 ASSFIMKPVS 327


>WB|WBGene00017530 [details] [associations]
            symbol:F16H11.1 species:6239 "Caenorhabditis elegans"
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
            "transmembrane transport" evidence=IEA] InterPro:IPR016196
            SUPFAM:SSF103473 EMBL:FO080880 eggNOG:COG2211 HOGENOM:HOG000006540
            GeneTree:ENSGT00390000016464 PIR:T16084 RefSeq:NP_508799.1
            ProteinModelPortal:Q19498 EnsemblMetazoa:F16H11.1 GeneID:180739
            KEGG:cel:CELE_F16H11.1 UCSC:F16H11.1 CTD:180739 WormBase:F16H11.1
            InParanoid:Q19498 OMA:HFYNDLC NextBio:910714 Uniprot:Q19498
        Length = 501

 Score = 295 (108.9 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 73/241 (30%), Positives = 123/241 (51%)

Query:    84 DRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTSTLKVETISYCVFAAIFNVGWAAT 143
             D+ G    WH                 C  C+  ++  LKV  + +  F  +F  GWA+ 
Sbjct:   105 DKIGRRMSWHLIGTVLVSLSFPMIFNKCFLCKSTTSEWLKV--LWFVPFIMVFQFGWASV 162

Query:   144 QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY-AIAFIVFSVSTAKTHA---DLE 199
             Q++H++++  ++    SR  + S R AFT++ANLS+Y A+A+++ S ST  T     D  
Sbjct:   163 QISHLALIPELSSVPASRATMNSLRYAFTVIANLSVYFALAWLL-SESTGHTSIGPWDFS 221

Query:   200 NQYRWIAYSSIFIGCCFVGIFLSRTEEP-RLKMGLRGNSHA-------RISWAYWFKKIL 251
             + +R   +  + +G     +F + T EP   +   R NS +       R+ W  WF  + 
Sbjct:   222 H-FRLAGWLVVVLGITVAFVFYAFTREPTNYRRFSRLNSFSSDASELVRMHWTSWFGHVQ 280

Query:   252 YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSIL--LQVI 309
             +YQ+AL+YML+RL +N+SQ Y  FY+       +   A++P + Y+ SF VS++  L V+
Sbjct:   281 FYQIALLYMLSRLYINISQVYFPFYITMTQNYEKKYVAILPMVAYLSSFSVSMVNSLPVV 340

Query:   310 S 310
             S
Sbjct:   341 S 341

 Score = 245 (91.3 bits), Expect = 4.1e-20, P = 4.1e-20
 Identities = 63/230 (27%), Positives = 110/230 (47%)

Query:    12 ENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI 70
             ++D SFT+ +       +G GH  ND+ A+ WFTY ++++  +       A  +ML GQ+
Sbjct:    29 DHDISFTKKIA------FGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQV 82

Query:    71 ADGFATIFIG---------ELIDRFGHFKIWHXXXXXXXXXXXXXXXXXCMPCRILSTST 121
              D  +T  +G            D+ G    WH                 C  C+  ++  
Sbjct:    83 TDAISTPLVGIFSDSNILPACFDKIGRRMSWHLIGTVLVSLSFPMIFNKCFLCKSTTSEW 142

Query:   122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY- 180
             LKV  + +  F  +F  GWA+ Q++H++++  ++    SR  + S R AFT++ANLS+Y 
Sbjct:   143 LKV--LWFVPFIMVFQFGWASVQISHLALIPELSSVPASRATMNSLRYAFTVIANLSVYF 200

Query:   181 AIAFIVFSVSTAKTHA---DLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227
             A+A+++ S ST  T     D  + +R   +  + +G     +F + T EP
Sbjct:   201 ALAWLL-SESTGHTSIGPWDFSH-FRLAGWLVVVLGITVAFVFYAFTREP 248


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.137   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      318       301   0.00096  115 3  11 22  0.40    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  216 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.10u 0.13s 20.23t   Elapsed:  00:00:01
  Total cpu time:  20.11u 0.13s 20.24t   Elapsed:  00:00:01
  Start:  Fri May 10 22:26:25 2013   End:  Fri May 10 22:26:26 2013

Back to top