BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021040
(318 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3U481|MFS12_MOUSE Major facilitator superfamily domain-containing protein 12 OS=Mus
musculus GN=Mfsd12 PE=2 SV=1
Length = 476
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 174/333 (52%), Gaps = 33/333 (9%)
Query: 12 ENDDSFTQPVGRWSV---LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLS 67
+DD+ P S+ L + GH LND+ A WFTYLLLFL + G S RGA ++L
Sbjct: 4 PSDDAGPGPPRTLSLAARLSFAVGHFLNDLCAGMWFTYLLLFLHSVRGYSSRGAGLLLLL 63
Query: 68 GQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122
GQ+ADG T +G DR G K WH AG+V V +SF +F C+ C +
Sbjct: 64 GQVADGLCTPLVGYEADRASCVRCGPRKAWHLAGTVCVLLSFPFIFSPCLGCG--EATPE 121
Query: 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182
+ Y F +F GWAATQ+AH+S++ + + +V LT+ R AFT+VAN+++Y
Sbjct: 122 WAALLYYGPFIVVFQFGWAATQIAHLSLIPELVTSDHEKVELTALRYAFTVVANITVYGA 181
Query: 183 AFIVFSVS-TAKTHADLE--NQ--------YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 231
A+++ + +A D+ +Q +R +A + +G F +F T+E
Sbjct: 182 AWLLLHLQGSAHGEQDISVGDQLGVQDVPVFRNLALLVVGVGAIFSLLFHLGTKEGHRSQ 241
Query: 232 --GLRGNSHARIS---------WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND 280
G N H + W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+
Sbjct: 242 HWGNEPNEHTPLVAPAAQPLLLWKHWLREPAFYQVGMLYMTTRLIVNLSQTYIAMYLTYS 301
Query: 281 LRMGQSAKALVPAIIYICSFIVSILLQVISLKL 313
L + + A +P ++Y+ F S L++ ++ ++
Sbjct: 302 LSLPKKFIATIPLVMYLSGFFSSFLMKPVNRRI 334
>sp|Q6NUT3|MFS12_HUMAN Major facilitator superfamily domain-containing protein 12 OS=Homo
sapiens GN=MFSD12 PE=2 SV=2
Length = 480
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 169/324 (52%), Gaps = 33/324 (10%)
Query: 18 TQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFAT 76
+P+ + L Y GH LND+ A+ WFTYLLL+L + S RGA ++L GQ+ADG T
Sbjct: 14 PRPLSLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCT 73
Query: 77 IFIGELIDR-------FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISY 129
+G DR +G K WH G+V V +SF +F C+ C + + + Y
Sbjct: 74 PLVGYEADRAASCCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCG--AATPEWAALLYY 131
Query: 130 CVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189
F IF GWA+TQ++H+S++ + N +V LT+ R AFT+VAN+++Y A+++ +
Sbjct: 132 GPFIVIFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFTVVANITVYGAAWLLLHL 191
Query: 190 ---STAKTHADLE--NQ--------YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 236
S + D+ +Q +R ++ + +G F +F T E R
Sbjct: 192 QGSSRVEPTQDISISDQLGGQDVPVFRNLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPG 251
Query: 237 SHARIS----------WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS 286
H + W +W ++ +YQV ++YM TRL+VN+SQ Y+A Y+ L + +
Sbjct: 252 EHTPLLAPATAQPLLLWKHWLREPAFYQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKK 311
Query: 287 AKALVPAIIYICSFIVSILLQVIS 310
A +P ++Y+ F+ S L++ I+
Sbjct: 312 FIATIPLVMYLSGFLSSFLMKPIN 335
>sp|P94488|YNAJ_BACSU Uncharacterized symporter YnaJ OS=Bacillus subtilis (strain 168)
GN=ynaJ PE=3 SV=2
Length = 463
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 35/235 (14%)
Query: 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID--- 84
Y SG ++ A TYLL F TD+ GLS A + L +I D A FIG ++D
Sbjct: 17 YASGDFACNLIYATVSTYLLFFYTDVFGLSAAAAGTMFLVVRIIDALADPFIGTIVDRTN 76
Query: 85 -RFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST---STLKVETISYCVFAAIFNVGW 140
RFG F+ + + G P IL+ +T + ++A I VG
Sbjct: 77 SRFGRFRPY--------------LLFGAFPFVILAILCFTTPDFSDMGKLIYAYITYVGL 122
Query: 141 AAT----QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196
+ T V + ++ + +T N+ V +TS R F ANL +AF V ++ +
Sbjct: 123 SLTYTTINVPYGALTSAMTRNNQEVVSITSVRMLF---ANLGGLVVAFFVPLLAAYLSDT 179
Query: 197 DLENQYRWIAYSSIF--IGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKK 249
W I IG C + IF ++ + R+ + S +I + F++
Sbjct: 180 SGNESLGWQLTMGILGMIGGCLL-IFCFKSTKERVTL---QKSEEKIKFTDIFEQ 230
>sp|P74168|Y1374_SYNY3 Uncharacterized symporter sll1374 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1374 PE=3 SV=1
Length = 544
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID- 84
L YG+G ITA YLL FLTD+ G+ A +V++ G+I D IG L D
Sbjct: 16 LAYGAGDFGPAITANILVFYLLFFLTDVAGIPAALAGSVLMIGKIFDAINDPIIGLLSDR 75
Query: 85 ---RFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE---TISYCVFAAIFNV 138
R+G W G + A+ +++ + +P S L + I Y A FN+
Sbjct: 76 TRSRWGRRLPWMLGGMIPFALFYTAQW--LIPH--FSDDRLTNQWGLFIYYVAIAMAFNL 131
Query: 139 GWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173
+ + + ++ +T N R L S R AF++
Sbjct: 132 CYTTVNLPYTALTPELTQNYNERTRLNSFRFAFSI 166
>sp|P23936|LACY_STRTR Lactose permease OS=Streptococcus thermophilus GN=lacS PE=3 SV=1
Length = 634
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 27/211 (12%)
Query: 25 SVLYYGSGHMLNDITAACWFTYLLLFLT----DIGLSPRGAAAVMLSG------QIADGF 74
S L Y +G ND+ A TY ++F+T + G + + V+L +I + F
Sbjct: 10 SRLSYAAGAFGNDVFYATLSTYFIMFVTTHLFNTGDPKQNSHYVLLITNIISILRILEVF 69
Query: 75 ATIFIGELID----RFGHFKIWHGAGSVLVAVSFSSVF---GGCMPCRILSTSTLKVETI 127
IG +ID ++G FK W G ++ +++ +F GG L+ + + +
Sbjct: 70 IDPLIGNMIDNTNTKYGKFKPWVVGGGIISSITLLLLFTDLGG------LNKTNPFLYLV 123
Query: 128 SYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVL-TSCRNAFTMVANLSLYAIAFIV 186
+ + + +V ++ + SM+ ++L+S R + T R T+ AN+ AI IV
Sbjct: 124 LFGIIYLVMDVFYSIKDIGFWSMIPALSLDSHEREKMATFARIGSTIGANIVGVAIMPIV 183
Query: 187 --FSVSTAKTHADLENQYRWIAYSSIFIGCC 215
FS++ D ++ + W A+ IG
Sbjct: 184 LFFSMTNNSGSGD-KSGWFWFAFIVALIGVI 213
>sp|P22733|LACY_LACDA Lactose permease OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC 11842 / DSM 20081) GN=lacY PE=3 SV=1
Length = 627
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 116/292 (39%), Gaps = 55/292 (18%)
Query: 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVML------SGQIADGFATIF 78
S L Y +G ND+ A TY ++F+T + + + + +I +
Sbjct: 7 SRLSYAAGAFGNDVFYATLSTYFIVFVTTHLFNAGDHKMIFIITNLITAIRIGEVLLDPL 66
Query: 79 IGELID----RFGHFKIWHGAGSVLVAVSFSSV---FGGCMPCRILSTSTLKVETISYCV 131
IG ID R+G FK W G ++ +++ ++ FGG ++ S V + + +
Sbjct: 67 IGNAIDRTESRWGKFKPWVVGGGIISSLALLALFTDFGG------INQSKPVVYLVIFGI 120
Query: 132 FAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTS-CRNAFTMVANLSLYAIAFIVFSVS 190
I ++ ++ +M+ ++L+S R ++ R T+ ANL I I+ S
Sbjct: 121 VYLIMDIFYSFKDTGFWAMIPALSLDSREREKTSTFARVGSTIGANLVGVVITPIILFFS 180
Query: 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRT---EEPRLKMGLRGNSHAR------- 240
+K + + + Q W ++ I VGI S T +K LR ++
Sbjct: 181 ASKANPNGDKQ-GWFFFALI---VAIVGILTSITVGLGTHEVKSALRESNEKTTLKQVFK 236
Query: 241 ----------ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR 282
+++AYWF Y L +N Q Y Y++ D R
Sbjct: 237 VLGQNDQLLWLAFAYWF-----------YGLGINTLNALQLYYFSYILGDAR 277
>sp|Q5ZLW3|DYM_CHICK Dymeclin OS=Gallus gallus GN=DYM PE=2 SV=1
Length = 669
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 193 KTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 231
K A+ +N + W A++++FI CC + +F+SR E L++
Sbjct: 89 KISAECQNHLFIWQAHNALFIICCLLKVFISRMSEEELQL 128
>sp|O33814|LACP_STAXY Lactose permease OS=Staphylococcus xylosus GN=lacP PE=3 SV=1
Length = 462
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-- 85
+G G + D +L+ ++TDI GLSP ++ +I D +G ++D
Sbjct: 13 FGFGAIGKDAIFNIVSVFLMFYITDIVGLSPAFVGVMLFVARIWDAINDPIMGMIVDNTR 72
Query: 86 --FGHFKIWHGAGSVLVAV 102
FG FK W G+++ AV
Sbjct: 73 NNFGKFKTWLVIGTLINAV 91
>sp|Q02581|MELB_KLEPN Melibiose carrier protein OS=Klebsiella pneumoniae GN=melB PE=3
SV=1
Length = 471
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID- 84
L YG G D + YL+ + TDI GLS + L +I D A +G +++
Sbjct: 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNC 68
Query: 85 ---RFGHFKIWHGAGSV 98
R+G FK W G++
Sbjct: 69 TRSRWGKFKPWILIGTI 85
>sp|O07366|MELB_ENTAE Melibiose carrier protein OS=Enterobacter aerogenes GN=melB PE=3
SV=1
Length = 471
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 27/182 (14%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID- 84
L YG G D + YL+ + TDI GLS + L +I D A +G +++
Sbjct: 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNC 68
Query: 85 ---RFGHFKIWHGAGSVLVAVSFSSVF------GGCMPCRILSTSTLKVETISYCVFAAI 135
R+G FK W G++ +V +F GG + L ++Y ++
Sbjct: 69 TRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGAL---------LAWVWLTYLLWGFT 119
Query: 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195
+ + V S+V ITL+ R L F A+L+ + A + +A
Sbjct: 120 YTI----MDVPFWSLVPTITLDKREREQLVPYPRFF---ASLAGFVTAGVTLPFVSAVGG 172
Query: 196 AD 197
AD
Sbjct: 173 AD 174
>sp|P02921|MELB_ECOLI Melibiose carrier protein OS=Escherichia coli (strain K12) GN=melB
PE=1 SV=2
Length = 473
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 27 LYYGSGHMLNDITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELID- 84
L YG G D + YL+ + TD +GLS + L +I D +G +++
Sbjct: 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNA 68
Query: 85 ---RFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWA 141
R+G FK W G++ +V +F + +T + + CV ++ + +
Sbjct: 69 TRSRWGKFKPWILIGTLANSVILFLLFS----AHLFEGTT---QIVFVCVTYILWGMTYT 121
Query: 142 ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176
+ S+V ITL+ R L F +A
Sbjct: 122 IMDIPFWSLVPTITLDKREREQLVPYPRFFASLAG 156
>sp|Q6DCP6|DYM_XENLA Dymeclin OS=Xenopus laevis GN=dym PE=2 SV=1
Length = 669
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 193 KTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRL 229
K A+ +NQ + W A++++FI CC + +F S+ E L
Sbjct: 89 KISAECQNQLFIWQAHNALFIICCLIKVFTSQVSEEEL 126
>sp|Q7WTB2|LACY_LACHE Lactose permease OS=Lactobacillus helveticus GN=lacS PE=2 SV=1
Length = 638
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 79 IGELID----RFGHFKIWHGAGSV----LVAVSFSSVFGGCMPCRILSTSTLKVETISYC 130
+G ++D R+G FK W G+V L+ + F+ +FG L+ + I +
Sbjct: 77 LGNVVDNTKTRWGKFKPWILIGTVVSAALLLILFTGIFG-------LAQQNWILFAILFV 129
Query: 131 VFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI--VFS 188
+ F+V ++ + V++ MV ++ +S R + TS AF+ + + I + V
Sbjct: 130 LIYIAFDVFYSLSDVSYWGMVPALSEDSHERGIYTSL-GAFSGIIGWNSLPIIVVPLVTG 188
Query: 189 VSTAKTHADLENQYRWIAYSSIF----IGCCFVGIFLSRTEEPRLKMGLRGNSHARISWA 244
V+ A T E W A++++ I C + F ++ + ++ + + R +
Sbjct: 189 VTYAVTGKHEEGAPGWFAFAAVISALAIICALIVCFGTKEKHNIIRDSAKQKTTLRQVFG 248
Query: 245 YWF--KKILYYQVA-LVYMLTRLVVNVSQAYLAFYVIN 279
F +IL+ +A L+Y L ++ N Y+ +VI
Sbjct: 249 AIFHNDQILWPSLAYLLYSLAAVITNGVLFYMYKFVIG 286
>sp|Q3T9M1|MFS2B_MOUSE Major facilitator superfamily domain-containing protein 2B OS=Mus
musculus GN=Mfsd2b PE=2 SV=1
Length = 494
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 22 GRWSV---LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVML-----SGQIADG 73
GR SV + YG G + N + ++ YL LFL D+ P ++ L SG +AD
Sbjct: 27 GRLSVCTKVCYGIGGVPNQVASSASAFYLQLFLLDVAQIPAAQVSLALFGGKVSGAVADP 86
Query: 74 FATIFIGE 81
A FI +
Sbjct: 87 VAGFFINK 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,878,722
Number of Sequences: 539616
Number of extensions: 3677726
Number of successful extensions: 9515
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 9491
Number of HSP's gapped (non-prelim): 44
length of query: 318
length of database: 191,569,459
effective HSP length: 117
effective length of query: 201
effective length of database: 128,434,387
effective search space: 25815311787
effective search space used: 25815311787
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)