Query         021046
Match_columns 318
No_of_seqs    349 out of 3110
Neff          9.8 
Searched_HMMs 46136
Date          Fri Mar 29 07:11:21 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021046hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG1187 Serine/threonine prote 100.0 1.8E-41 3.8E-46  303.2  18.9  168  137-305    61-229 (361)
  2 KOG0595 Serine/threonine-prote 100.0 2.7E-37 5.9E-42  266.2  13.4  161  149-318     8-177 (429)
  3 KOG0615 Serine/threonine prote 100.0 1.5E-35 3.2E-40  255.4  12.6  161  149-318   170-341 (475)
  4 KOG0192 Tyrosine kinase specif 100.0 2.3E-34 5.1E-39  255.9  15.6  153  151-306    41-197 (362)
  5 KOG0575 Polo-like serine/threo 100.0   2E-34 4.2E-39  259.7  15.1  160  151-318    18-181 (592)
  6 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-34 2.8E-39  257.9  12.8  157  148-309   203-359 (468)
  7 KOG0600 Cdc2-related protein k 100.0 5.6E-34 1.2E-38  251.3  14.8  162  149-316   115-281 (560)
  8 KOG0581 Mitogen-activated prot 100.0 4.1E-34 8.9E-39  244.3  12.2  159  151-318    79-240 (364)
  9 KOG0598 Ribosomal protein S6 k 100.0   1E-33 2.3E-38  241.7  12.0  162  149-318    23-188 (357)
 10 KOG1026 Nerve growth factor re 100.0 2.6E-33 5.7E-38  261.3  10.5  153  148-303   483-653 (774)
 11 KOG3653 Transforming growth fa 100.0 8.4E-33 1.8E-37  242.1  10.2  161  150-318   209-381 (534)
 12 KOG0592 3-phosphoinositide-dep 100.0 1.7E-32 3.7E-37  243.8  11.3  152  149-306    71-227 (604)
 13 KOG0591 NIMA (never in mitosis 100.0 5.7E-34 1.2E-38  234.7   1.5  167  150-318    18-191 (375)
 14 KOG0659 Cdk activating kinase  100.0 4.9E-32 1.1E-36  221.6  12.2  150  151-306     2-154 (318)
 15 KOG1094 Discoidin domain recep 100.0 9.5E-33 2.1E-37  247.0   8.2  153  148-304   535-688 (807)
 16 KOG0611 Predicted serine/threo 100.0 9.4E-33   2E-37  237.8   7.5  153  150-308    52-208 (668)
 17 KOG0593 Predicted protein kina 100.0 1.2E-32 2.6E-37  229.0   7.5  149  151-305     2-153 (396)
 18 KOG0616 cAMP-dependent protein 100.0 1.1E-31 2.4E-36  222.6  11.8  158  150-318    43-204 (355)
 19 KOG0194 Protein tyrosine kinas 100.0 3.9E-31 8.4E-36  238.9  11.6  153  147-304   153-313 (474)
 20 KOG0198 MEKK and related serin 100.0 1.8E-30   4E-35  224.7  14.4  151  150-305    16-170 (313)
 21 KOG0583 Serine/threonine prote 100.0 2.4E-30 5.2E-35  232.1  15.1  162  148-318    14-184 (370)
 22 KOG0605 NDR and related serine 100.0 1.9E-30 4.1E-35  230.7  13.3  152  147-304   137-292 (550)
 23 KOG0196 Tyrosine kinase, EPH ( 100.0 1.4E-31   3E-36  246.5   6.0  151  152-307   630-785 (996)
 24 KOG0585 Ca2+/calmodulin-depend 100.0 3.2E-30   7E-35  226.0  14.1  150  148-303    94-260 (576)
 25 KOG2052 Activin A type IB rece 100.0 1.3E-30 2.8E-35  226.9   9.5  165  131-306   194-369 (513)
 26 KOG0597 Serine-threonine prote 100.0 9.9E-31 2.1E-35  233.5   8.8  159  151-318     2-163 (808)
 27 KOG0661 MAPK related serine/th 100.0 4.4E-31 9.4E-36  231.6   5.5  151  149-306     8-163 (538)
 28 KOG0594 Protein kinase PCTAIRE 100.0 1.1E-29 2.3E-34  216.8  13.5  151  150-304    10-171 (323)
 29 KOG0663 Protein kinase PITSLRE 100.0 3.6E-30 7.8E-35  216.9  10.4  153  148-306    73-230 (419)
 30 KOG0694 Serine/threonine prote 100.0 9.8E-30 2.1E-34  232.1  13.9  163  147-318   364-531 (694)
 31 KOG0580 Serine/threonine prote 100.0 1.5E-30 3.3E-35  209.9   7.1  162  149-318    20-185 (281)
 32 KOG0578 p21-activated serine/t 100.0 9.1E-30   2E-34  227.9  11.5  161  149-318   271-432 (550)
 33 cd05102 PTKc_VEGFR3 Catalytic  100.0 1.9E-29 4.1E-34  226.3  13.3  155  148-305     4-226 (338)
 34 cd05096 PTKc_DDR1 Catalytic do 100.0 4.9E-29 1.1E-33  220.3  15.3  153  150-305     4-190 (304)
 35 KOG1095 Protein tyrosine kinas 100.0 1.3E-29 2.9E-34  244.5  11.1  151  150-303   691-852 (1025)
 36 KOG0193 Serine/threonine prote 100.0 1.4E-29   3E-34  228.0   9.6  155  142-304   383-539 (678)
 37 PTZ00426 cAMP-dependent protei 100.0 1.2E-28 2.7E-33  221.0  14.6  151  149-305    28-183 (340)
 38 cd05628 STKc_NDR1 Catalytic do 100.0 8.4E-29 1.8E-33  224.2  13.6  148  151-304     1-152 (363)
 39 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-28 2.4E-33  224.6  14.1  147  151-303     1-151 (377)
 40 cd05621 STKc_ROCK2 Catalytic d 100.0 1.2E-28 2.6E-33  223.6  14.2  151  148-305    40-194 (370)
 41 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-28 2.8E-33  220.4  14.2  149  151-305     1-153 (333)
 42 cd05599 STKc_NDR_like Catalyti 100.0   1E-28 2.3E-33  223.7  13.2  148  151-304     1-152 (364)
 43 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-28 2.8E-33  224.4  13.7  146  152-303     2-151 (381)
 44 PTZ00263 protein kinase A cata 100.0 1.8E-28   4E-33  219.1  14.2  150  150-305    17-170 (329)
 45 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-28 5.8E-33  217.5  14.8  141  157-303     1-145 (323)
 46 KOG0582 Ste20-like serine/thre 100.0   3E-28 6.6E-33  212.3  14.3  155  149-307    24-180 (516)
 47 KOG0589 Serine/threonine prote 100.0 4.3E-29 9.3E-34  221.8   9.2  163  150-318     3-169 (426)
 48 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-28 2.4E-33  216.8  11.7  149  151-305     1-153 (291)
 49 cd05598 STKc_LATS Catalytic do 100.0 3.2E-28   7E-33  221.5  14.8  147  151-303     1-151 (376)
 50 cd05625 STKc_LATS1 Catalytic d 100.0 2.4E-28 5.2E-33  222.8  13.6  146  152-303     2-151 (382)
 51 KOG0658 Glycogen synthase kina 100.0 4.4E-29 9.5E-34  213.1   8.1  150  152-309    25-182 (364)
 52 PTZ00267 NIMA-related protein  100.0 5.6E-28 1.2E-32  226.2  16.1  152  152-306    68-222 (478)
 53 cd05631 STKc_GRK4 Catalytic do 100.0 7.2E-28 1.6E-32  211.0  15.7  149  153-305     2-154 (285)
 54 cd05104 PTKc_Kit Catalytic dom 100.0 3.4E-28 7.3E-33  221.1  13.9  154  149-305    33-266 (375)
 55 cd05593 STKc_PKB_gamma Catalyt 100.0 5.5E-28 1.2E-32  215.9  15.0  141  157-303     1-145 (328)
 56 cd05596 STKc_ROCK Catalytic do 100.0 3.4E-28 7.4E-33  220.7  13.5  151  149-306    41-195 (370)
 57 cd05622 STKc_ROCK1 Catalytic d 100.0 4.4E-28 9.6E-33  219.9  14.2  153  147-306    39-195 (371)
 58 KOG4250 TANK binding protein k 100.0 1.3E-28 2.7E-33  225.5  10.4  160  153-318    15-186 (732)
 59 cd05595 STKc_PKB_beta Catalyti 100.0 4.9E-28 1.1E-32  215.8  13.8  141  157-303     1-145 (323)
 60 cd05585 STKc_YPK1_like Catalyt 100.0 6.7E-28 1.4E-32  213.9  14.5  140  159-304     1-144 (312)
 61 KOG0588 Serine/threonine prote 100.0 1.6E-28 3.6E-33  223.0  10.7  152  150-307    11-166 (786)
 62 cd05597 STKc_DMPK_like Catalyt 100.0 9.9E-28 2.1E-32  214.6  15.4  150  151-305     1-154 (331)
 63 cd05601 STKc_CRIK Catalytic do 100.0 6.1E-28 1.3E-32  215.8  14.0  151  151-306     1-155 (330)
 64 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-27 3.1E-32  213.0  16.3  142  157-304     1-147 (325)
 65 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-27 2.4E-32  214.2  15.0  151  151-306     1-155 (331)
 66 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-27 2.8E-32  218.4  15.4  155  148-305    34-289 (400)
 67 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.8E-28 1.3E-32  217.6  13.0  150  151-306     1-154 (350)
 68 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-27 2.8E-32  213.9  14.9  148  152-305     1-157 (332)
 69 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-27 3.1E-32  214.2  15.0  161  148-318    32-201 (382)
 70 cd05106 PTKc_CSF-1R Catalytic  100.0 7.9E-28 1.7E-32  218.5  13.1  155  148-305    35-264 (374)
 71 cd05627 STKc_NDR2 Catalytic do 100.0 1.2E-27 2.6E-32  216.4  14.1  148  151-304     1-152 (360)
 72 cd05584 STKc_p70S6K Catalytic  100.0 1.6E-27 3.5E-32  212.5  14.7  141  157-303     2-150 (323)
 73 KOG4278 Protein tyrosine kinas 100.0   1E-28 2.2E-33  222.8   7.0  159  146-309   262-421 (1157)
 74 cd07871 STKc_PCTAIRE3 Catalyti 100.0   2E-27 4.4E-32  208.5  15.0  149  150-304     4-154 (288)
 75 cd05064 PTKc_EphR_A10 Catalyti  99.9 2.2E-27 4.8E-32  205.8  14.4  149  150-303     4-157 (266)
 76 cd05582 STKc_RSK_N N-terminal   99.9   2E-27 4.3E-32  211.4  14.5  144  157-306     2-151 (318)
 77 PLN00034 mitogen-activated pro  99.9 1.8E-27 3.9E-32  214.7  13.8  146  150-305    73-220 (353)
 78 KOG1989 ARK protein kinase fam  99.9 5.8E-28 1.3E-32  226.5  10.8  152  148-301    34-194 (738)
 79 cd06649 PKc_MEK2 Catalytic dom  99.9 3.6E-27 7.9E-32  210.9  15.5  151  150-305     4-156 (331)
 80 cd05623 STKc_MRCK_alpha Cataly  99.9   3E-27 6.5E-32  211.5  14.9  150  151-305     1-154 (332)
 81 cd06650 PKc_MEK1 Catalytic dom  99.9 3.2E-27   7E-32  211.4  15.0  150  150-304     4-155 (333)
 82 PHA03212 serine/threonine kina  99.9 3.3E-27 7.2E-32  215.4  15.4  142  150-304    91-233 (391)
 83 cd05108 PTKc_EGFR Catalytic do  99.9 2.7E-27 5.9E-32  210.4  14.4  151  150-306     6-162 (316)
 84 cd07848 STKc_CDKL5 Catalytic d  99.9 2.9E-27 6.3E-32  207.2  14.3  149  151-305     1-152 (287)
 85 cd05618 STKc_aPKC_iota Catalyt  99.9 3.6E-27 7.7E-32  210.8  15.1  141  157-303     1-146 (329)
 86 KOG0610 Putative serine/threon  99.9 1.4E-27 3.1E-32  206.5  11.9  151  149-303    75-229 (459)
 87 cd05090 PTKc_Ror1 Catalytic do  99.9   5E-27 1.1E-31  205.3  15.5  152  151-305     5-176 (283)
 88 KOG1025 Epidermal growth facto  99.9 5.4E-29 1.2E-33  230.5   3.1  151  153-309   698-854 (1177)
 89 cd07869 STKc_PFTAIRE1 Catalyti  99.9 4.5E-27 9.7E-32  207.7  15.3  149  150-304     4-154 (303)
 90 cd05114 PTKc_Tec_Rlk Catalytic  99.9 5.5E-27 1.2E-31  202.0  15.5  148  151-304     4-151 (256)
 91 cd05587 STKc_cPKC Catalytic do  99.9 4.1E-27 8.9E-32  210.0  15.1  146  152-303     1-151 (324)
 92 cd05591 STKc_nPKC_epsilon Cata  99.9   4E-27 8.6E-32  209.8  14.9  141  157-303     1-146 (321)
 93 cd05588 STKc_aPKC Catalytic do  99.9 3.7E-27 8.1E-32  210.7  14.6  140  157-302     1-145 (329)
 94 cd05589 STKc_PKN Catalytic dom  99.9 3.4E-27 7.3E-32  210.5  14.2  144  153-303     1-151 (324)
 95 cd05592 STKc_nPKC_theta_delta   99.9 4.3E-27 9.4E-32  209.1  14.8  142  157-304     1-147 (316)
 96 cd05068 PTKc_Frk_like Catalyti  99.9 7.6E-27 1.7E-31  201.7  15.9  152  149-305     4-155 (261)
 97 KOG0660 Mitogen-activated prot  99.9   1E-27 2.2E-32  204.4   9.9  150  150-306    21-178 (359)
 98 cd05113 PTKc_Btk_Bmx Catalytic  99.9 8.2E-27 1.8E-31  201.1  15.8  150  151-306     4-153 (256)
 99 cd05608 STKc_GRK1 Catalytic do  99.9 6.6E-27 1.4E-31  204.4  15.3  144  159-305     1-149 (280)
100 cd05616 STKc_cPKC_beta Catalyt  99.9 5.8E-27 1.3E-31  208.9  14.9  147  152-304     1-152 (323)
101 KOG0662 Cyclin-dependent kinas  99.9   6E-28 1.3E-32  187.3   7.1  148  152-305     3-153 (292)
102 cd05148 PTKc_Srm_Brk Catalytic  99.9 4.2E-27   9E-32  203.2  13.2  153  149-305     4-156 (261)
103 cd05107 PTKc_PDGFR_beta Cataly  99.9 6.5E-27 1.4E-31  213.7  15.0  155  148-305    34-291 (401)
104 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9   8E-27 1.7E-31  204.0  15.0  150  151-305     4-160 (284)
105 cd07859 STKc_TDY_MAPK_plant Ca  99.9 5.7E-27 1.2E-31  210.1  14.4  146  152-304     1-154 (338)
106 PTZ00283 serine/threonine prot  99.9   4E-27 8.7E-32  220.8  13.9  156  148-306    29-196 (496)
107 PHA02988 hypothetical protein;  99.9 8.9E-27 1.9E-31  203.9  15.2  143  157-305    26-175 (283)
108 cd05590 STKc_nPKC_eta Catalyti  99.9 5.9E-27 1.3E-31  208.6  14.3  141  157-303     1-146 (320)
109 cd05072 PTKc_Lyn Catalytic dom  99.9 9.7E-27 2.1E-31  201.0  15.0  152  149-305     4-155 (261)
110 cd05604 STKc_SGK3 Catalytic do  99.9 7.4E-27 1.6E-31  208.4  14.7  141  157-303     1-146 (325)
111 cd05605 STKc_GRK4_like Catalyt  99.9   9E-27 1.9E-31  204.0  14.9  150  152-305     1-154 (285)
112 cd06646 STKc_MAP4K5 Catalytic   99.9 1.3E-26 2.8E-31  200.8  15.6  150  149-304     7-157 (267)
113 cd05575 STKc_SGK Catalytic dom  99.9   9E-27   2E-31  207.7  14.8  141  157-303     1-146 (323)
114 cd05615 STKc_cPKC_alpha Cataly  99.9 7.3E-27 1.6E-31  208.3  14.1  147  152-304     1-152 (323)
115 KOG4236 Serine/threonine prote  99.9 7.2E-27 1.6E-31  207.4  13.7  155  156-318   569-729 (888)
116 PF07714 Pkinase_Tyr:  Protein   99.9 6.2E-27 1.3E-31  202.2  13.2  146  155-304     3-154 (259)
117 cd05059 PTKc_Tec_like Catalyti  99.9 1.4E-26   3E-31  199.5  15.2  149  151-305     4-152 (256)
118 cd05603 STKc_SGK2 Catalytic do  99.9 8.3E-27 1.8E-31  207.7  14.2  141  157-303     1-146 (321)
119 cd05062 PTKc_IGF-1R Catalytic   99.9 8.2E-27 1.8E-31  203.3  13.9  154  149-305     4-171 (277)
120 cd05042 PTKc_Aatyk Catalytic d  99.9 1.3E-26 2.7E-31  201.2  14.9  143  158-303     2-150 (269)
121 PRK13184 pknD serine/threonine  99.9 1.7E-26 3.8E-31  224.0  17.3  150  151-303     2-163 (932)
122 PHA03211 serine/threonine kina  99.9 1.3E-26 2.9E-31  214.5  15.7  145  150-306   168-313 (461)
123 cd05033 PTKc_EphR Catalytic do  99.9 1.7E-26 3.7E-31  200.0  15.4  150  150-304     3-157 (266)
124 cd05617 STKc_aPKC_zeta Catalyt  99.9 1.1E-26 2.4E-31  207.5  14.5  141  157-303     1-146 (327)
125 cd05619 STKc_nPKC_theta Cataly  99.9 1.5E-26 3.3E-31  205.6  15.3  141  157-303     1-146 (316)
126 cd05111 PTK_HER3 Pseudokinase   99.9 2.4E-26 5.2E-31  200.7  15.8  150  151-306     7-162 (279)
127 cd05093 PTKc_TrkB Catalytic do  99.9 1.8E-26 3.9E-31  202.4  15.0  152  151-305     5-172 (288)
128 cd05610 STKc_MASTL Catalytic d  99.9 1.7E-26 3.8E-31  223.6  16.3  151  150-306     3-157 (669)
129 cd05097 PTKc_DDR_like Catalyti  99.9 1.4E-26 3.1E-31  203.7  14.2  152  150-304     4-180 (295)
130 cd05049 PTKc_Trk Catalytic dom  99.9 1.9E-26 4.2E-31  201.1  14.7  152  150-304     4-173 (280)
131 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9 2.5E-26 5.5E-31  199.4  15.3  146  157-305     1-152 (269)
132 cd05620 STKc_nPKC_delta Cataly  99.9 1.6E-26 3.5E-31  205.4  14.3  141  157-303     1-146 (316)
133 cd05602 STKc_SGK1 Catalytic do  99.9 1.8E-26 3.8E-31  205.9  14.5  141  157-303     1-146 (325)
134 cd07872 STKc_PCTAIRE2 Catalyti  99.9 2.4E-26 5.2E-31  203.6  15.2  148  151-304     6-155 (309)
135 cd05061 PTKc_InsR Catalytic do  99.9 1.6E-26 3.4E-31  202.7  13.8  154  148-304     3-170 (288)
136 cd07853 STKc_NLK Catalytic dom  99.9 1.8E-26 3.9E-31  209.7  14.6  148  152-306     1-156 (372)
137 KOG0586 Serine/threonine prote  99.9 1.2E-26 2.5E-31  209.8  13.0  154  148-307    53-209 (596)
138 cd07862 STKc_CDK6 Catalytic do  99.9   4E-26 8.7E-31  200.2  16.2  151  151-306     1-163 (290)
139 cd05094 PTKc_TrkC Catalytic do  99.9 2.7E-26 5.9E-31  201.5  15.1  152  151-305     5-175 (291)
140 cd05103 PTKc_VEGFR2 Catalytic   99.9 1.7E-26 3.7E-31  207.5  14.0  153  149-304     5-230 (343)
141 cd05048 PTKc_Ror Catalytic Dom  99.9 3.4E-26 7.4E-31  199.9  15.5  152  150-304     4-175 (283)
142 PHA03209 serine/threonine kina  99.9 3.9E-26 8.5E-31  206.3  16.3  145  148-304    63-208 (357)
143 cd05084 PTKc_Fes Catalytic dom  99.9 2.9E-26 6.3E-31  196.9  14.7  143  157-304     1-145 (252)
144 cd05075 PTKc_Axl Catalytic dom  99.9 3.6E-26 7.7E-31  198.6  15.3  149  154-305     2-164 (272)
145 cd05066 PTKc_EphR_A Catalytic   99.9 2.7E-26 5.8E-31  199.0  14.5  152  150-306     3-159 (267)
146 cd05095 PTKc_DDR2 Catalytic do  99.9 3.1E-26 6.7E-31  201.7  15.0  153  150-305     4-182 (296)
147 cd05051 PTKc_DDR Catalytic dom  99.9 3.7E-26   8E-31  201.0  15.4  153  150-305     4-182 (296)
148 KOG0584 Serine/threonine prote  99.9   2E-27 4.4E-32  215.0   7.4  156  155-318    44-207 (632)
149 cd05045 PTKc_RET Catalytic dom  99.9 3.9E-26 8.5E-31  200.4  15.4  150  152-304     1-178 (290)
150 cd05054 PTKc_VEGFR Catalytic d  99.9 1.3E-26 2.7E-31  207.9  12.5  154  149-305     5-225 (337)
151 cd06645 STKc_MAP4K3 Catalytic   99.9 2.9E-26 6.3E-31  198.7  14.4  150  149-304     7-157 (267)
152 cd05570 STKc_PKC Catalytic dom  99.9 2.8E-26 6.1E-31  204.0  14.6  141  157-303     1-146 (318)
153 cd05101 PTKc_FGFR2 Catalytic d  99.9 3.5E-26 7.6E-31  202.1  15.0  154  149-305    13-189 (304)
154 cd05053 PTKc_FGFR Catalytic do  99.9 2.7E-26 5.8E-31  201.6  13.9  155  148-305     9-184 (293)
155 cd05071 PTKc_Src Catalytic dom  99.9 6.3E-26 1.4E-30  196.2  16.0  151  150-306     5-155 (262)
156 cd06615 PKc_MEK Catalytic doma  99.9 4.1E-26 8.9E-31  202.1  15.1  149  151-304     1-151 (308)
157 cd05091 PTKc_Ror2 Catalytic do  99.9 2.8E-26   6E-31  200.5  13.9  152  151-305     5-176 (283)
158 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 2.8E-26 6.1E-31  199.8  13.8  141  158-303     2-174 (274)
159 cd06611 STKc_SLK_like Catalyti  99.9 2.5E-26 5.3E-31  200.6  13.2  151  149-304     3-154 (280)
160 PHA03207 serine/threonine kina  99.9 5.4E-26 1.2E-30  207.9  15.9  146  149-306    90-238 (392)
161 cd05043 PTK_Ryk Pseudokinase d  99.9 3.5E-26 7.6E-31  199.6  14.0  154  149-305     4-169 (280)
162 cd05035 PTKc_Axl_like Catalyti  99.9 6.8E-26 1.5E-30  196.7  15.6  150  153-305     1-165 (273)
163 cd05065 PTKc_EphR_B Catalytic   99.9 4.6E-26   1E-30  197.7  14.5  150  151-305     4-158 (269)
164 cd05092 PTKc_TrkA Catalytic do  99.9 5.5E-26 1.2E-30  198.5  14.9  151  151-304     5-173 (280)
165 KOG4721 Serine/threonine prote  99.9 2.3E-27 5.1E-32  212.2   6.3  149  153-318   126-274 (904)
166 cd05034 PTKc_Src_like Catalyti  99.9 6.6E-26 1.4E-30  195.7  15.2  152  149-305     4-155 (261)
167 cd05052 PTKc_Abl Catalytic dom  99.9 6.4E-26 1.4E-30  196.2  15.1  151  151-306     6-157 (263)
168 cd05067 PTKc_Lck_Blk Catalytic  99.9 6.9E-26 1.5E-30  195.6  15.3  151  149-305     4-154 (260)
169 cd06622 PKc_MAPKK_PBS2_like Ca  99.9   3E-26 6.5E-31  200.6  13.1  152  151-304     1-154 (286)
170 cd07861 STKc_CDK1_euk Catalyti  99.9 9.8E-26 2.1E-30  197.1  16.1  149  152-304     1-152 (285)
171 cd05032 PTKc_InsR_like Catalyt  99.9 4.4E-26 9.6E-31  198.5  13.9  154  149-305     4-171 (277)
172 cd06656 STKc_PAK3 Catalytic do  99.9 5.2E-26 1.1E-30  200.4  14.4  151  149-306    17-168 (297)
173 cd05039 PTKc_Csk_like Catalyti  99.9 5.9E-26 1.3E-30  195.5  14.5  149  150-304     5-153 (256)
174 cd05632 STKc_GRK5 Catalytic do  99.9 8.2E-26 1.8E-30  197.9  15.6  148  153-304     2-153 (285)
175 cd06619 PKc_MKK5 Catalytic dom  99.9 9.2E-26   2E-30  197.0  15.8  145  151-305     1-147 (279)
176 KOG4257 Focal adhesion tyrosin  99.9 1.2E-26 2.7E-31  209.5  10.4  155  147-307   385-545 (974)
177 cd05086 PTKc_Aatyk2 Catalytic   99.9 4.9E-26 1.1E-30  197.5  13.9  142  158-302     2-148 (268)
178 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 6.2E-26 1.4E-30  198.5  14.6  150  151-305     4-161 (284)
179 cd08228 STKc_Nek6 Catalytic do  99.9   1E-25 2.2E-30  195.1  15.8  152  151-305     2-158 (267)
180 cd05586 STKc_Sck1_like Catalyt  99.9 5.2E-26 1.1E-30  203.4  14.1  139  159-303     1-146 (330)
181 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 6.9E-26 1.5E-30  195.2  14.3  142  157-305     1-160 (259)
182 KOG0577 Serine/threonine prote  99.9 1.5E-27 3.3E-32  214.1   4.1  152  149-306    24-179 (948)
183 cd06644 STKc_STK10_LOK Catalyt  99.9 9.1E-26   2E-30  198.2  15.3  150  150-304    11-161 (292)
184 cd05607 STKc_GRK7 Catalytic do  99.9 1.4E-25 3.1E-30  195.6  16.3  143  159-305     1-147 (277)
185 cd05070 PTKc_Fyn_Yrk Catalytic  99.9 1.2E-25 2.6E-30  194.0  15.8  150  150-305     5-154 (260)
186 cd07847 STKc_CDKL1_4 Catalytic  99.9 1.2E-25 2.6E-30  196.6  15.9  150  151-306     1-153 (286)
187 cd05088 PTKc_Tie2 Catalytic do  99.9 6.3E-26 1.4E-30  200.4  14.2  150  150-302     6-173 (303)
188 PTZ00036 glycogen synthase kin  99.9 6.5E-26 1.4E-30  210.0  14.9  149  149-305    64-223 (440)
189 cd05098 PTKc_FGFR1 Catalytic d  99.9 6.6E-26 1.4E-30  200.6  14.3  152  150-304    17-191 (307)
190 cd05085 PTKc_Fer Catalytic dom  99.9 1.3E-25 2.7E-30  192.7  15.5  144  157-305     1-145 (250)
191 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 8.8E-26 1.9E-30  195.4  14.6  143  157-304     1-163 (262)
192 cd05580 STKc_PKA Catalytic dom  99.9 8.9E-26 1.9E-30  198.2  14.8  150  151-306     1-154 (290)
193 cd06643 STKc_SLK Catalytic dom  99.9 9.7E-26 2.1E-30  197.1  15.0  148  152-304     6-154 (282)
194 cd05055 PTKc_PDGFR Catalytic d  99.9 7.1E-26 1.5E-30  200.0  14.2  153  149-305    33-193 (302)
195 cd05069 PTKc_Yes Catalytic dom  99.9 1.4E-25 3.1E-30  193.7  15.8  150  150-305     5-154 (260)
196 cd05115 PTKc_Zap-70 Catalytic   99.9 1.4E-25   3E-30  193.5  15.5  143  158-306     2-148 (257)
197 cd05109 PTKc_HER2 Catalytic do  99.9 1.2E-25 2.5E-30  196.2  15.2  150  150-305     6-161 (279)
198 KOG0574 STE20-like serine/thre  99.9 1.4E-27 3.1E-32  198.9   2.9  161  149-318    31-192 (502)
199 PF00069 Pkinase:  Protein kina  99.9 5.1E-26 1.1E-30  196.0  12.6  145  153-303     1-148 (260)
200 KOG0201 Serine/threonine prote  99.9 3.4E-27 7.3E-32  205.5   5.2  160  151-318    13-174 (467)
201 cd06654 STKc_PAK1 Catalytic do  99.9 1.1E-25 2.4E-30  198.2  14.9  150  149-305    18-168 (296)
202 cd05046 PTK_CCK4 Pseudokinase   99.9 1.1E-25 2.3E-30  195.9  14.6  150  151-303     5-167 (275)
203 KOG0599 Phosphorylase kinase g  99.9   8E-27 1.7E-31  192.0   6.9  162  148-318    14-185 (411)
204 cd05050 PTKc_Musk Catalytic do  99.9   1E-25 2.3E-30  197.4  14.4  152  150-304     4-181 (288)
205 cd05630 STKc_GRK6 Catalytic do  99.9 1.5E-25 3.3E-30  196.3  15.4  149  153-305     2-154 (285)
206 cd05089 PTKc_Tie1 Catalytic do  99.9 1.1E-25 2.3E-30  198.3  14.5  150  151-303     2-169 (297)
207 cd06625 STKc_MEKK3_like Cataly  99.9 1.7E-25 3.7E-30  193.2  15.4  149  151-305     2-156 (263)
208 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.9 1.3E-25 2.8E-30  196.4  14.6  146  153-305     6-159 (283)
209 cd06632 STKc_MEKK1_plant Catal  99.9 1.6E-25 3.5E-30  192.7  15.0  149  152-306     1-155 (258)
210 cd05100 PTKc_FGFR3 Catalytic d  99.9 1.1E-25 2.4E-30  201.5  14.5  154  149-305    10-186 (334)
211 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 2.5E-25 5.4E-30  192.6  16.2  152  151-305     2-158 (267)
212 cd05063 PTKc_EphR_A2 Catalytic  99.9 1.5E-25 3.3E-30  194.2  14.8  151  150-305     4-159 (268)
213 cd05099 PTKc_FGFR4 Catalytic d  99.9 1.2E-25 2.6E-30  199.6  14.5  153  149-304    10-185 (314)
214 cd08221 STKc_Nek9 Catalytic do  99.9 2.7E-25 5.8E-30  191.3  16.2  151  152-306     1-154 (256)
215 cd00192 PTKc Catalytic domain   99.9 2.5E-25 5.4E-30  191.6  16.0  147  157-306     1-158 (262)
216 cd06624 STKc_ASK Catalytic dom  99.9 1.4E-25 3.1E-30  194.5  14.4  155  148-305     5-161 (268)
217 cd06637 STKc_TNIK Catalytic do  99.9 1.6E-25 3.5E-30  194.4  14.7  152  149-305     4-163 (272)
218 cd07873 STKc_PCTAIRE1 Catalyti  99.9 1.9E-25   4E-30  197.2  15.1  149  150-304     5-155 (301)
219 cd05036 PTKc_ALK_LTK Catalytic  99.9 1.9E-25   4E-30  194.8  14.8  153  149-304     4-170 (277)
220 cd05116 PTKc_Syk Catalytic dom  99.9 2.3E-25   5E-30  192.0  15.2  142  158-306     2-148 (257)
221 cd08529 STKc_FA2-like Catalyti  99.9 2.4E-25 5.3E-30  191.4  15.3  151  152-306     1-154 (256)
222 cd05057 PTKc_EGFR_like Catalyt  99.9 2.1E-25 4.5E-30  194.7  15.0  150  150-305     6-161 (279)
223 cd07841 STKc_CDK7 Catalytic do  99.9   2E-25 4.4E-30  196.5  15.0  149  152-306     1-155 (298)
224 cd06655 STKc_PAK2 Catalytic do  99.9 1.5E-25 3.3E-30  197.4  14.1  150  150-306    18-168 (296)
225 cd06628 STKc_MAPKKK_Byr2_like   99.9 2.9E-25 6.3E-30  192.3  15.7  148  152-305     1-158 (267)
226 cd06613 STKc_MAP4K3_like Catal  99.9 2.3E-25   5E-30  192.2  15.0  151  150-305     2-153 (262)
227 cd05073 PTKc_Hck Catalytic dom  99.9   2E-25 4.3E-30  192.8  14.5  151  149-305     4-154 (260)
228 cd07878 STKc_p38beta_MAPK11 Ca  99.9 1.2E-25 2.5E-30  202.2  13.5  150  148-305    12-170 (343)
229 KOG0199 ACK and related non-re  99.9 1.6E-26 3.5E-31  211.0   7.8  154  149-307   108-266 (1039)
230 cd05040 PTKc_Ack_like Catalyti  99.9 2.2E-25 4.7E-30  192.0  14.5  144  157-305     1-149 (257)
231 cd07876 STKc_JNK2 Catalytic do  99.9 2.5E-25 5.5E-30  201.2  15.5  147  149-304    19-174 (359)
232 cd08229 STKc_Nek7 Catalytic do  99.9 1.3E-25 2.8E-30  194.6  13.0  152  151-305     2-158 (267)
233 cd07868 STKc_CDK8 Catalytic do  99.9   3E-25 6.4E-30  197.3  15.5  144  156-305     6-164 (317)
234 PRK09188 serine/threonine prot  99.9 1.8E-25   4E-30  199.0  14.1  141  149-306    16-165 (365)
235 cd06631 STKc_YSK4 Catalytic do  99.9 2.4E-25 5.2E-30  192.7  14.5  146  152-303     1-152 (265)
236 cd05609 STKc_MAST Catalytic do  99.9 2.2E-25 4.8E-30  197.1  14.5  146  151-302     1-150 (305)
237 cd06629 STKc_MAPKKK_Bck1_like   99.9 2.7E-25 5.9E-30  193.1  14.8  147  152-304     2-159 (272)
238 cd05038 PTKc_Jak_rpt2 Catalyti  99.9 2.7E-25 5.7E-30  194.1  14.7  149  151-304     4-160 (284)
239 cd05112 PTKc_Itk Catalytic dom  99.9 3.7E-25 8.1E-30  190.4  15.3  149  151-305     4-152 (256)
240 KOG0666 Cyclin C-dependent kin  99.9 1.3E-26 2.9E-31  193.8   6.0  154  149-306    22-189 (438)
241 cd08219 STKc_Nek3 Catalytic do  99.9 7.1E-25 1.5E-29  188.6  16.8  150  152-305     1-152 (255)
242 cd06652 STKc_MEKK2 Catalytic d  99.9 2.4E-25 5.1E-30  192.8  13.8  148  151-304     2-157 (265)
243 cd07846 STKc_CDKL2_3 Catalytic  99.9 1.5E-25 3.4E-30  196.0  12.6  149  151-305     1-152 (286)
244 cd05041 PTKc_Fes_like Catalyti  99.9   5E-25 1.1E-29  189.1  15.4  143  157-304     1-144 (251)
245 KOG0033 Ca2+/calmodulin-depend  99.9 2.1E-27 4.6E-32  192.5   0.6  151  149-305     9-165 (355)
246 cd06638 STKc_myosinIIIA Cataly  99.9   3E-25 6.4E-30  194.3  14.0  158  144-305    11-176 (286)
247 cd05047 PTKc_Tie Catalytic dom  99.9 5.9E-25 1.3E-29  190.9  15.5  143  157-302     1-161 (270)
248 cd05056 PTKc_FAK Catalytic dom  99.9 3.2E-25   7E-30  192.5  13.8  151  150-306     5-160 (270)
249 cd05110 PTKc_HER4 Catalytic do  99.9 3.7E-25   8E-30  195.5  14.3  150  150-305     6-161 (303)
250 cd05082 PTKc_Csk Catalytic dom  99.9 7.3E-25 1.6E-29  188.7  15.8  149  150-305     5-154 (256)
251 cd05574 STKc_phototropin_like   99.9 7.1E-25 1.5E-29  194.7  16.1  150  151-304     1-154 (316)
252 cd07844 STKc_PCTAIRE_like Cata  99.9 4.6E-25   1E-29  193.6  14.5  148  150-303     4-153 (291)
253 cd07832 STKc_CCRK Catalytic do  99.9   7E-25 1.5E-29  191.7  15.5  149  152-306     1-152 (286)
254 cd06626 STKc_MEKK4 Catalytic d  99.9 5.5E-25 1.2E-29  190.1  14.7  148  152-305     1-151 (264)
255 cd07874 STKc_JNK3 Catalytic do  99.9 2.7E-25 5.8E-30  200.8  13.2  149  148-305    14-171 (355)
256 cd06642 STKc_STK25-YSK1 Cataly  99.9 2.7E-25 5.8E-30  193.7  12.5  148  151-305     4-153 (277)
257 cd06612 STKc_MST1_2 Catalytic   99.9 5.8E-25 1.3E-29  189.1  14.4  149  150-305     2-151 (256)
258 smart00219 TyrKc Tyrosine kina  99.9 9.1E-25   2E-29  187.9  15.5  149  154-306     2-156 (258)
259 cd05613 STKc_MSK1_N N-terminal  99.9   6E-25 1.3E-29  192.8  14.5  148  152-305     1-157 (290)
260 cd06658 STKc_PAK5 Catalytic do  99.9 1.9E-25 4.2E-30  196.3  11.2  148  151-305    22-170 (292)
261 cd06917 STKc_NAK1_like Catalyt  99.9   1E-24 2.3E-29  189.9  15.8  148  152-306     2-154 (277)
262 KOG0579 Ste20-like serine/thre  99.9 9.8E-27 2.1E-31  210.5   3.0  163  149-318    30-193 (1187)
263 cd06617 PKc_MKK3_6 Catalytic d  99.9   6E-25 1.3E-29  191.9  14.2  151  151-304     1-155 (283)
264 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 4.5E-25 9.8E-30  193.1  13.4  150  150-304     4-155 (284)
265 cd06659 STKc_PAK6 Catalytic do  99.9 3.3E-25 7.1E-30  195.3  12.6  146  153-305    23-169 (297)
266 cd07867 STKc_CDC2L6 Catalytic   99.9 1.2E-24 2.5E-29  193.3  16.2  144  157-306     7-165 (317)
267 cd05578 STKc_Yank1 Catalytic d  99.9 2.7E-25 5.8E-30  191.6  11.8  149  152-306     1-153 (258)
268 cd06610 STKc_OSR1_SPAK Catalyt  99.9 1.3E-24 2.8E-29  188.0  16.1  152  151-305     1-154 (267)
269 KOG0690 Serine/threonine prote  99.9 4.4E-26 9.5E-31  191.8   6.5  162  149-318   166-331 (516)
270 cd05074 PTKc_Tyro3 Catalytic d  99.9 1.2E-24 2.7E-29  189.0  15.9  150  153-305     1-165 (273)
271 cd07842 STKc_CDK8_like Catalyt  99.9 8.9E-25 1.9E-29  193.9  15.2  150  152-305     1-164 (316)
272 KOG4279 Serine/threonine prote  99.9 1.4E-25 3.1E-30  204.8  10.2  154  158-318   582-739 (1226)
273 cd07870 STKc_PFTAIRE2 Catalyti  99.9 6.6E-25 1.4E-29  192.7  14.1  149  149-303     3-153 (291)
274 cd06640 STKc_MST4 Catalytic do  99.9 1.1E-24 2.4E-29  189.9  15.4  148  151-305     4-153 (277)
275 cd05060 PTKc_Syk_like Catalyti  99.9 1.2E-24 2.5E-29  187.6  15.3  143  157-306     1-148 (257)
276 cd07875 STKc_JNK1 Catalytic do  99.9 5.7E-25 1.2E-29  199.3  14.1  148  149-305    22-178 (364)
277 cd06630 STKc_MEKK1 Catalytic d  99.9 4.2E-25 9.2E-30  191.3  12.7  149  152-306     1-157 (268)
278 cd07836 STKc_Pho85 Catalytic d  99.9   1E-24 2.2E-29  190.6  15.2  149  152-304     1-151 (284)
279 cd05058 PTKc_Met_Ron Catalytic  99.9 8.7E-25 1.9E-29  188.8  14.6  143  157-304     1-149 (262)
280 cd06651 STKc_MEKK3 Catalytic d  99.9 8.9E-25 1.9E-29  189.3  14.5  148  151-304     2-157 (266)
281 cd06609 STKc_MST3_like Catalyt  99.9 1.2E-24 2.6E-29  189.3  15.3  149  151-306     1-151 (274)
282 cd06623 PKc_MAPKK_plant_like C  99.9 1.2E-24 2.5E-29  188.0  15.1  150  151-306     1-153 (264)
283 cd06647 STKc_PAK_I Catalytic d  99.9 7.8E-25 1.7E-29  192.5  14.2  149  150-305    18-167 (293)
284 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9 2.8E-25 6.2E-30  191.6  11.0  144  157-305     1-160 (258)
285 cd06641 STKc_MST3 Catalytic do  99.9 1.5E-24 3.2E-29  189.1  15.7  147  152-305     5-153 (277)
286 KOG0612 Rho-associated, coiled  99.9 3.9E-26 8.4E-31  218.1   6.0  169  143-318    67-239 (1317)
287 cd05083 PTKc_Chk Catalytic dom  99.9 1.1E-24 2.4E-29  187.4  14.6  146  151-304     6-151 (254)
288 PTZ00266 NIMA-related protein   99.9 4.8E-25 1.1E-29  215.0  13.6  158  148-305    10-194 (1021)
289 cd05147 RIO1_euk RIO kinase fa  99.9 5.2E-25 1.1E-29  180.6  11.7  141  156-305     2-169 (190)
290 cd08227 PK_STRAD_alpha Pseudok  99.9 1.1E-24 2.3E-29  194.6  14.7  145  155-303     2-151 (327)
291 cd06639 STKc_myosinIIIB Cataly  99.9 9.9E-25 2.1E-29  191.5  14.2  158  144-305    15-180 (291)
292 KOG1035 eIF-2alpha kinase GCN2  99.9 1.7E-25 3.7E-30  215.2   9.6  151  147-302   475-746 (1351)
293 cd07833 STKc_CDKL Catalytic do  99.9 1.2E-24 2.6E-29  190.5  14.1  150  151-306     1-153 (288)
294 cd07843 STKc_CDC2L1 Catalytic   99.9 1.6E-24 3.4E-29  190.4  14.7  150  151-306     5-159 (293)
295 cd07863 STKc_CDK4 Catalytic do  99.9 1.6E-24 3.5E-29  189.7  14.8  149  152-305     1-160 (288)
296 cd06653 STKc_MEKK3_like_1 Cata  99.9 1.6E-24 3.4E-29  187.6  14.3  148  151-304     2-157 (264)
297 KOG4717 Serine/threonine prote  99.9 3.3E-25 7.1E-30  196.5  10.0  152  151-307    18-173 (864)
298 KOG2345 Serine/threonine prote  99.9 1.5E-25 3.2E-30  182.0   7.0  154  148-302    18-178 (302)
299 PHA03210 serine/threonine kina  99.9 9.7E-25 2.1E-29  205.2  13.4  154  148-306   145-320 (501)
300 cd08218 STKc_Nek1 Catalytic do  99.9 2.6E-24 5.7E-29  185.1  15.1  150  152-305     1-153 (256)
301 KOG0667 Dual-specificity tyros  99.9 7.1E-25 1.5E-29  200.0  11.8  148  152-305   187-343 (586)
302 PLN00113 leucine-rich repeat r  99.9 1.5E-24 3.3E-29  219.6  15.1  143  150-303   689-832 (968)
303 cd05122 PKc_STE Catalytic doma  99.9 5.8E-24 1.3E-28  181.9  16.4  150  152-306     1-151 (253)
304 cd07860 STKc_CDK2_3 Catalytic   99.9 1.9E-24   4E-29  189.0  13.6  148  152-304     1-151 (284)
305 cd06627 STKc_Cdc7_like Catalyt  99.9 4.6E-24 9.9E-29  183.1  15.7  149  152-306     1-152 (254)
306 cd08528 STKc_Nek10 Catalytic d  99.9 3.4E-24 7.4E-29  185.9  14.9  153  152-306     1-167 (269)
307 cd05145 RIO1_like RIO kinase f  99.9   4E-24 8.7E-29  175.9  14.5  142  156-306     2-170 (190)
308 KOG1151 Tousled-like protein k  99.9 2.9E-25 6.2E-30  193.8   8.0  155  150-308   462-628 (775)
309 cd05044 PTKc_c-ros Catalytic d  99.9 1.5E-24 3.3E-29  188.0  12.6  145  157-304     1-162 (269)
310 cd07839 STKc_CDK5 Catalytic do  99.9   1E-24 2.2E-29  190.7  11.5  147  152-304     1-150 (284)
311 cd06607 STKc_TAO Catalytic dom  99.9 2.7E-24 5.8E-29  190.3  14.2  150  149-304    13-166 (307)
312 cd07837 STKc_CdkB_plant Cataly  99.9 4.1E-24 8.8E-29  187.9  15.2  150  151-304     1-162 (295)
313 cd06605 PKc_MAPKK Catalytic do  99.9 1.8E-24   4E-29  187.0  12.8  149  151-304     1-152 (265)
314 cd08223 STKc_Nek4 Catalytic do  99.9 5.1E-24 1.1E-28  183.4  15.5  150  152-305     1-154 (257)
315 KOG0607 MAP kinase-interacting  99.9 2.7E-25 5.8E-30  186.6   7.0  141  157-303    84-229 (463)
316 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 3.7E-24 8.1E-29  187.6  14.6  151  151-304     1-156 (287)
317 cd06614 STKc_PAK Catalytic dom  99.9 5.2E-24 1.1E-28  186.5  15.3  151  149-305    17-168 (286)
318 cd05577 STKc_GRK Catalytic dom  99.9 3.6E-24 7.9E-29  186.7  14.2  142  159-304     1-146 (277)
319 cd07852 STKc_MAPK15 Catalytic   99.9 2.8E-24 6.1E-29  192.7  13.8  149  149-305     5-159 (337)
320 cd06657 STKc_PAK4 Catalytic do  99.9 3.8E-24 8.2E-29  188.1  14.3  143  156-305    25-168 (292)
321 cd06608 STKc_myosinIII_like Ca  99.9 3.5E-24 7.5E-29  186.0  13.9  152  149-304     4-164 (275)
322 cd06606 STKc_MAPKKK Catalytic   99.9 6.4E-24 1.4E-28  182.4  15.3  150  152-307     1-155 (260)
323 cd05579 STKc_MAST_like Catalyt  99.9 1.8E-24 3.8E-29  186.7  11.8  140  159-304     1-144 (265)
324 cd05572 STKc_cGK_PKG Catalytic  99.9 5.7E-24 1.2E-28  183.8  14.7  141  159-305     1-145 (262)
325 cd05633 STKc_GRK3 Catalytic do  99.9 5.5E-24 1.2E-28  185.8  14.5  141  158-304     1-148 (279)
326 cd07864 STKc_CDK12 Catalytic d  99.9 4.3E-24 9.2E-29  188.4  13.8  152  148-305     4-168 (302)
327 cd08220 STKc_Nek8 Catalytic do  99.9 7.4E-24 1.6E-28  182.2  14.9  151  152-306     1-155 (256)
328 cd06648 STKc_PAK_II Catalytic   99.9 7.1E-24 1.5E-28  185.7  15.0  147  152-305    20-167 (285)
329 cd06636 STKc_MAP4K4_6 Catalyti  99.9 4.9E-24 1.1E-28  186.2  13.8  157  143-304     8-172 (282)
330 cd07880 STKc_p38gamma_MAPK12 C  99.9 5.1E-24 1.1E-28  191.5  14.2  151  147-305    11-170 (343)
331 cd07849 STKc_ERK1_2_like Catal  99.9 4.3E-24 9.4E-29  191.4  13.6  148  150-305     4-158 (336)
332 PLN03224 probable serine/threo  99.9 3.7E-24 7.9E-29  198.5  13.4  153  149-304   143-360 (507)
333 cd05581 STKc_PDK1 Catalytic do  99.9 1.8E-24 3.9E-29  188.4  10.6  150  151-306     1-155 (280)
334 cd08217 STKc_Nek2 Catalytic do  99.9 6.2E-24 1.3E-28  183.3  13.6  156  152-307     1-164 (265)
335 cd07840 STKc_CDK9_like Catalyt  99.9 9.3E-24   2E-28  184.6  14.7  148  153-306     1-153 (287)
336 PTZ00284 protein kinase; Provi  99.9 6.1E-24 1.3E-28  198.6  14.4  150  146-303   124-298 (467)
337 cd07845 STKc_CDK10 Catalytic d  99.9 8.7E-24 1.9E-28  187.2  14.6  151  149-305     5-160 (309)
338 PLN00009 cyclin-dependent kina  99.9 1.6E-23 3.5E-28  184.1  16.0  149  151-304     2-154 (294)
339 cd05583 STKc_MSK_N N-terminal   99.9 6.3E-24 1.4E-28  186.1  13.2  148  152-305     1-157 (288)
340 cd08215 STKc_Nek Catalytic dom  99.9   2E-23 4.3E-28  179.4  15.8  152  152-306     1-156 (258)
341 cd07865 STKc_CDK9 Catalytic do  99.9 1.2E-23 2.6E-28  186.1  14.6  152  148-305     9-171 (310)
342 cd07835 STKc_CDK1_like Catalyt  99.9 1.1E-23 2.4E-28  184.0  14.2  147  153-304     1-150 (283)
343 KOG0986 G protein-coupled rece  99.9 1.7E-24 3.6E-29  189.4   8.8  156  149-308   183-342 (591)
344 cd07850 STKc_JNK Catalytic dom  99.9 1.2E-23 2.5E-28  189.9  14.6  149  149-306    14-171 (353)
345 cd05606 STKc_beta_ARK Catalyti  99.9 1.7E-23 3.7E-28  182.6  15.0  141  158-304     1-148 (278)
346 cd07855 STKc_ERK5 Catalytic do  99.9 6.4E-24 1.4E-28  190.2  12.5  149  150-305     4-159 (334)
347 KOG4645 MAPKKK (MAP kinase kin  99.9 3.6E-25 7.8E-30  214.0   4.5  151  150-306  1234-1387(1509)
348 cd07877 STKc_p38alpha_MAPK14 C  99.9 1.5E-23 3.2E-28  188.6  14.7  154  143-304     9-171 (345)
349 cd06635 STKc_TAO1 Catalytic do  99.9 2.2E-23 4.8E-28  185.3  15.6  149  151-305    25-177 (317)
350 KOG1152 Signal transduction se  99.9 2.8E-24   6E-29  192.8   9.6  158  151-318   561-731 (772)
351 cd08225 STKc_Nek5 Catalytic do  99.9 1.2E-23 2.7E-28  180.9  13.2  151  152-306     1-155 (257)
352 PTZ00024 cyclin-dependent prot  99.9 1.7E-23 3.7E-28  187.4  14.2  148  150-304     7-170 (335)
353 PHA03390 pk1 serine/threonine-  99.9 4.3E-23 9.4E-28  179.0  16.1  149  146-305     9-162 (267)
354 cd05611 STKc_Rim15_like Cataly  99.9 2.2E-23 4.8E-28  179.9  14.2  142  157-304     2-148 (260)
355 cd07858 STKc_TEY_MAPK_plant Ca  99.9 1.4E-23 3.1E-28  188.2  13.3  149  150-305     4-160 (337)
356 cd07831 STKc_MOK Catalytic dom  99.9 3.1E-23 6.8E-28  180.9  14.9  146  153-305     1-151 (282)
357 cd07857 STKc_MPK1 Catalytic do  99.9 3.7E-23   8E-28  185.1  15.3  147  152-305     1-157 (332)
358 cd07834 STKc_MAPK Catalytic do  99.9 1.3E-23 2.8E-28  187.8  12.1  148  152-306     1-156 (330)
359 KOG0200 Fibroblast/platelet-de  99.9 1.2E-23 2.6E-28  201.2  12.5  159  146-307   291-472 (609)
360 cd08530 STKc_CNK2-like Catalyt  99.9 1.7E-23 3.7E-28  179.8  12.0  152  152-306     1-156 (256)
361 cd08216 PK_STRAD Pseudokinase   99.9   3E-23 6.5E-28  184.1  13.7  145  155-304     6-152 (314)
362 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 5.3E-23 1.1E-27  183.8  14.9  149  148-304     7-159 (328)
363 KOG0596 Dual specificity; seri  99.9 1.1E-23 2.3E-28  188.3  10.2  163  149-318   359-524 (677)
364 cd07830 STKc_MAK_like Catalyti  99.9 2.8E-23 6.1E-28  181.4  12.7  148  153-305     1-151 (283)
365 cd06634 STKc_TAO2 Catalytic do  99.9 5.3E-23 1.1E-27  182.2  14.0  150  150-305    14-167 (308)
366 PHA02882 putative serine/threo  99.9   1E-22 2.2E-27  179.1  15.6  149  150-305    11-178 (294)
367 cd06633 STKc_TAO3 Catalytic do  99.9 1.1E-22 2.4E-27  180.6  15.8  145  153-303    23-171 (313)
368 cd07879 STKc_p38delta_MAPK13 C  99.9 6.1E-23 1.3E-27  184.5  14.2  146  150-304    14-168 (342)
369 KOG0984 Mitogen-activated prot  99.9 1.1E-23 2.3E-28  167.0   8.1  158  146-306    41-202 (282)
370 cd08226 PK_STRAD_beta Pseudoki  99.9 5.2E-23 1.1E-27  183.8  13.5  141  157-301     4-149 (328)
371 cd05118 STKc_CMGC Catalytic do  99.9 4.7E-23   1E-27  179.8  12.9  148  153-306     1-151 (283)
372 cd06618 PKc_MKK7 Catalytic dom  99.9 5.2E-23 1.1E-27  181.1  13.3  152  149-305    13-167 (296)
373 cd07854 STKc_MAPK4_6 Catalytic  99.9 3.3E-23 7.1E-28  186.2  12.2  147  150-304     4-166 (342)
374 cd05123 STKc_AGC Catalytic dom  99.9 6.6E-23 1.4E-27  175.6  13.3  141  159-305     1-145 (250)
375 cd07838 STKc_CDK4_6_like Catal  99.9 1.3E-22 2.9E-27  177.3  15.5  149  153-306     1-160 (287)
376 KOG0608 Warts/lats-like serine  99.9 1.2E-23 2.5E-28  190.6   8.8  148  150-303   628-779 (1034)
377 cd07829 STKc_CDK_like Catalyti  99.9 4.7E-23   1E-27  179.7  12.5  147  153-305     1-150 (282)
378 KOG0587 Traf2- and Nck-interac  99.9 9.6E-23 2.1E-27  190.8  14.9  169  143-318    11-186 (953)
379 cd07866 STKc_BUR1 Catalytic do  99.9 5.3E-23 1.1E-27  182.0  12.6  150  150-305     7-167 (311)
380 cd06616 PKc_MKK4 Catalytic dom  99.9 5.1E-23 1.1E-27  180.4  12.2  152  151-305     4-160 (288)
381 KOG0696 Serine/threonine prote  99.9 7.7E-24 1.7E-28  183.4   5.1  163  148-318   346-513 (683)
382 cd08222 STKc_Nek11 Catalytic d  99.9 9.2E-23   2E-27  176.0  11.5  150  152-305     1-157 (260)
383 cd07851 STKc_p38 Catalytic dom  99.9 8.5E-23 1.8E-27  183.6  10.9  149  149-305    13-170 (343)
384 PRK10345 hypothetical protein;  99.9 3.2E-22   7E-27  165.7  13.3  138  154-302     5-159 (210)
385 KOG0668 Casein kinase II, alph  99.9 1.7E-23 3.6E-28  168.4   4.7  146  149-306    36-186 (338)
386 KOG0695 Serine/threonine prote  99.9 6.3E-23 1.4E-27  173.6   8.3  162  149-318   248-414 (593)
387 KOG0669 Cyclin T-dependent kin  99.9 1.6E-24 3.4E-29  176.6  -1.6  150  150-305    16-176 (376)
388 cd05576 STKc_RPK118_like Catal  99.9 2.9E-22 6.3E-27  170.7  11.6  133  162-305     4-137 (237)
389 KOG0664 Nemo-like MAPK-related  99.9 3.1E-24 6.6E-29  176.9  -1.2  155  152-313    54-216 (449)
390 KOG1006 Mitogen-activated prot  99.9 4.9E-24 1.1E-28  174.9  -0.1  153  151-306    64-221 (361)
391 smart00221 STYKc Protein kinas  99.9 1.6E-21 3.5E-26  163.9  14.5  149  153-306     1-151 (225)
392 PLN03225 Serine/threonine-prot  99.9 5.1E-22 1.1E-26  188.3  12.0  149  149-304   130-307 (566)
393 KOG0983 Mitogen-activated prot  99.9 9.1E-23   2E-27  168.2   5.5  154  149-307    90-246 (391)
394 PRK10359 lipopolysaccharide co  99.9 3.6E-21 7.8E-26  160.1  12.0  143  148-306    28-187 (232)
395 cd00180 PKc Catalytic domain o  99.9 1.6E-20 3.6E-25  155.5  15.8  143  159-306     1-146 (215)
396 smart00090 RIO RIO-like kinase  99.9 4.7E-21   1E-25  162.5  12.5  154  143-306    20-201 (237)
397 KOG0614 cGMP-dependent protein  99.9 4.9E-23 1.1E-27  182.4   0.2  161  149-318   418-582 (732)
398 PRK14879 serine/threonine prot  99.9 8.7E-21 1.9E-25  158.8  13.8  136  157-304     2-145 (211)
399 KOG0576 Mitogen-activated prot  99.9 1.4E-22 2.9E-27  184.7   2.5  163  148-318    12-175 (829)
400 KOG0604 MAP kinase-activated p  99.9 4.9E-22 1.1E-26  165.7   5.6  147  149-304    59-215 (400)
401 KOG1163 Casein kinase (serine/  99.9 4.2E-21 9.2E-26  155.7  10.6  152  148-307    12-168 (341)
402 smart00220 S_TKc Serine/Threon  99.8 1.6E-20 3.5E-25  159.4  13.3  138  163-306     1-140 (244)
403 cd05144 RIO2_C RIO kinase fami  99.8 1.7E-20 3.7E-25  155.4  13.0  141  150-306    14-178 (198)
404 PRK09605 bifunctional UGMP fam  99.8 1.4E-20   3E-25  178.4  12.9  140  150-305   332-479 (535)
405 PRK12274 serine/threonine prot  99.8   4E-20 8.7E-25  150.8  13.7  133  155-305     6-144 (218)
406 TIGR03724 arch_bud32 Kae1-asso  99.8 3.4E-20 7.4E-25  153.7  12.7  132  158-304     1-140 (199)
407 KOG1027 Serine/threonine prote  99.8 5.7E-21 1.2E-25  178.2   8.4  149  153-309   511-667 (903)
408 KOG1024 Receptor-like protein   99.8 3.1E-21 6.7E-26  166.3   5.9  159  144-305   277-448 (563)
409 KOG1165 Casein kinase (serine/  99.8 2.3E-20   5E-25  157.9  10.9  151  149-307    26-183 (449)
410 KOG1345 Serine/threonine kinas  99.8 1.4E-20 2.9E-25  155.2   7.8  148  149-304    22-174 (378)
411 KOG1164 Casein kinase (serine/  99.8 1.6E-19 3.4E-24  160.7  12.7  145  152-301    19-175 (322)
412 KOG0603 Ribosomal protein S6 k  99.8 1.1E-19 2.3E-24  165.7   9.7  146  150-306   321-469 (612)
413 KOG1290 Serine/threonine prote  99.8 4.1E-19   9E-24  157.0  10.6  135  150-289    77-224 (590)
414 KOG1167 Serine/threonine prote  99.8 1.8E-19 3.9E-24  156.8   8.2  149  146-305    31-185 (418)
415 cd05119 RIO RIO kinase family,  99.8 7.6E-19 1.7E-23  144.1  11.6  139  156-306     2-167 (187)
416 KOG0671 LAMMER dual specificit  99.8 3.5E-19 7.6E-24  153.2   9.5  154  149-308    87-267 (415)
417 cd05120 APH_ChoK_like Aminogly  99.8 2.3E-18 5.1E-23  135.6  12.9  136  156-304     3-140 (155)
418 KOG0665 Jun-N-terminal kinase   99.8 4.8E-19   1E-23  149.2   5.4  147  150-306    16-171 (369)
419 PRK01723 3-deoxy-D-manno-octul  99.8 1.7E-17 3.7E-22  140.9  13.6  136  157-304    37-193 (239)
420 KOG0670 U4/U6-associated splic  99.7 1.8E-18 3.9E-23  154.1   7.2  158  146-308   427-592 (752)
421 COG0515 SPS1 Serine/threonine   99.7 8.4E-17 1.8E-21  142.1  15.8  150  153-307     2-156 (384)
422 KOG1166 Mitotic checkpoint ser  99.7 3.5E-17 7.5E-22  159.0   9.4  147  148-303   695-851 (974)
423 TIGR01982 UbiB 2-polyprenylphe  99.7 1.1E-16 2.5E-21  147.2  10.8  142  157-306   123-310 (437)
424 cd05151 ChoK Choline Kinase (C  99.6 1.7E-14 3.7E-19  116.2  11.2  132  156-303     3-137 (170)
425 PRK04750 ubiB putative ubiquin  99.5 5.2E-15 1.1E-19  138.0   6.1  145  151-306   120-317 (537)
426 KOG0590 Checkpoint kinase and   99.5 1.2E-14 2.6E-19  138.1   4.1  145  154-305   321-472 (601)
427 PLN00181 protein SPA1-RELATED;  99.5 2.8E-14 6.1E-19  141.7   4.9   94  203-302    28-148 (793)
428 cd05154 ACAD10_11_like Acyl-Co  99.4 2.3E-12 5.1E-17  108.3  13.3  142  157-302     4-206 (223)
429 cd05146 RIO3_euk RIO kinase fa  99.4 5.2E-12 1.1E-16  103.1  13.9  139  157-306     3-177 (197)
430 PF08276 PAN_2:  PAN-like domai  99.4   2E-13 4.4E-18   91.4   3.0   40    1-41     27-66  (66)
431 COG3642 Mn2+-dependent serine/  99.4 4.1E-12   9E-17  100.5  10.6  136  157-307     2-145 (204)
432 KOG0603 Ribosomal protein S6 k  99.4 1.2E-13 2.7E-18  126.5   0.8  145  158-308     1-152 (612)
433 KOG1240 Protein kinase contain  99.3 1.6E-13 3.5E-18  132.5   0.2  142  152-301    24-168 (1431)
434 KOG3087 Serine/threonine prote  99.3 2.9E-11 6.2E-16   95.4  11.1  150  155-309    11-172 (229)
435 PF14531 Kinase-like:  Kinase-l  99.3 5.8E-12 1.3E-16  108.3   7.7  151  151-305    12-197 (288)
436 KOG4158 BRPK/PTEN-induced prot  99.3 1.7E-12 3.8E-17  113.1   4.5   89  205-301   274-393 (598)
437 KOG0195 Integrin-linked kinase  99.2 1.9E-12 4.1E-17  107.5   1.9  138  154-295   193-333 (448)
438 KOG1023 Natriuretic peptide re  99.2 1.2E-11 2.7E-16  113.0   6.6  100  201-304     1-100 (484)
439 cd00129 PAN_APPLE PAN/APPLE-li  99.2   2E-11 4.3E-16   84.4   4.4   51    1-56     25-79  (80)
440 PF01163 RIO1:  RIO1 family;  I  99.2 2.2E-10 4.8E-15   93.2  10.5  127  166-305     1-158 (188)
441 PRK15123 lipopolysaccharide co  99.1 2.2E-09 4.7E-14   92.5  15.1  140  159-303    30-195 (268)
442 KOG0590 Checkpoint kinase and   99.1   2E-11 4.4E-16  116.3   0.2  155  151-309    20-182 (601)
443 cd01098 PAN_AP_plant Plant PAN  99.0 2.8E-10   6E-15   80.4   5.0   52    2-58     33-84  (84)
444 KOG3741 Poly(A) ribonuclease s  99.0 2.3E-09   5E-14   97.0  11.1  140  165-307   290-447 (655)
445 KOG1243 Protein kinase [Genera  98.9 3.8E-09 8.3E-14   98.3   9.3  123  172-304    34-156 (690)
446 COG0478 RIO-like serine/threon  98.9 1.3E-08 2.9E-13   85.6  10.5  150  141-305    81-254 (304)
447 COG0661 AarF Predicted unusual  98.9 9.1E-09   2E-13   95.9  10.0  143  157-306   131-318 (517)
448 PF06293 Kdo:  Lipopolysacchari  98.9 2.1E-08 4.5E-13   83.4  11.2  109  190-304    54-172 (206)
449 KOG0601 Cyclin-dependent kinas  98.8 1.5E-09 3.3E-14   99.7   3.4  149  148-302   262-416 (524)
450 KOG0606 Microtubule-associated  98.8 4.5E-09 9.8E-14  102.1   4.5  111  150-303    82-193 (1205)
451 KOG0601 Cyclin-dependent kinas  98.8 6.3E-09 1.4E-13   95.7   4.8  152  151-308   114-278 (524)
452 PRK09902 hypothetical protein;  98.7 5.5E-07 1.2E-11   74.0  14.5  139  159-302    26-179 (216)
453 TIGR02172 Fb_sc_TIGR02172 Fibr  98.7 3.6E-07 7.9E-12   77.0  13.8  139  157-302     7-182 (226)
454 smart00750 KIND kinase non-cat  98.7 4.1E-08   9E-13   79.3   6.5   62  232-306     1-62  (176)
455 KOG1266 Protein kinase [Signal  98.7 1.2E-08 2.7E-13   87.4   3.3   96  199-295   119-220 (458)
456 PF12260 PIP49_C:  Protein-kina  98.7 1.4E-07   3E-12   77.0   9.3  106  195-304     7-113 (188)
457 KOG1033 eIF-2alpha kinase PEK/  98.7 5.1E-09 1.1E-13   94.8   0.8   81  221-307   330-410 (516)
458 PF06176 WaaY:  Lipopolysacchar  98.6 4.5E-07 9.7E-12   74.8  10.8  139  149-303    29-184 (229)
459 cd05150 APH Aminoglycoside 3'-  98.6 8.3E-07 1.8E-11   75.8  12.3  141  158-302     5-193 (244)
460 KOG1235 Predicted unusual prot  98.6 5.2E-07 1.1E-11   84.1  11.3  140  157-305   167-357 (538)
461 PF01636 APH:  Phosphotransfera  98.5   1E-06 2.2E-11   74.4  11.0  145  156-303     2-198 (239)
462 PLN02876 acyl-CoA dehydrogenas  98.5 3.1E-06 6.6E-11   84.7  15.3   79  156-234    43-131 (822)
463 COG1718 RIO1 Serine/threonine   98.5 2.5E-06 5.3E-11   71.3  11.7  154  142-306    36-219 (268)
464 cd05155 APH_ChoK_like_1 Unchar  98.3   8E-06 1.7E-10   69.4  10.6   73  157-235     3-82  (235)
465 PRK10593 hypothetical protein;  98.3 2.7E-05 5.9E-10   68.5  13.8   78  154-234    17-100 (297)
466 PF13095 FTA2:  Kinetochore Sim  98.2 2.5E-05 5.4E-10   63.8  10.9  125  151-300    37-206 (207)
467 cd05157 ETNK_euk Ethanolamine   98.2 3.6E-05 7.8E-10   65.3  12.0  141  157-302     4-201 (235)
468 PF10707 YrbL-PhoP_reg:  PhoP r  98.2   5E-05 1.1E-09   62.4  12.2  133  156-301     6-171 (199)
469 TIGR02721 ycfN_thiK thiamine k  98.1 3.5E-05 7.5E-10   66.3  11.0  139  158-302     3-175 (256)
470 COG2112 Predicted Ser/Thr prot  98.0 7.9E-05 1.7E-09   59.2  10.6  130  154-303    25-156 (201)
471 cd05153 HomoserineK_II Homoser  98.0 0.00013 2.7E-09   64.2  12.2  143  156-302    19-205 (296)
472 smart00473 PAN_AP divergent su  97.9 1.6E-05 3.5E-10   54.8   4.7   38    2-42     26-65  (78)
473 PRK05231 homoserine kinase; Pr  97.9 0.00055 1.2E-08   60.9  15.5  141  157-301    28-216 (319)
474 PRK09550 mtnK methylthioribose  97.9 0.00032   7E-09   63.8  13.2   75  157-233    32-117 (401)
475 TIGR00938 thrB_alt homoserine   97.8  0.0012 2.7E-08   58.3  15.3  143  156-301    27-216 (307)
476 cd05156 ChoK_euk Choline Kinas  97.8 0.00033 7.1E-09   61.8  11.1  141  157-302     4-213 (302)
477 PF03881 Fructosamin_kin:  Fruc  97.5  0.0011 2.4E-08   57.8  10.8   75  154-232    20-97  (288)
478 PLN02236 choline kinase         97.5  0.0019 4.1E-08   58.1  12.2  142  157-303    42-232 (344)
479 COG3173 Predicted aminoglycosi  97.5  0.0024 5.2E-08   56.3  12.2  144  157-302    31-228 (321)
480 cd05152 MPH2' Macrolide 2'-Pho  97.5  0.0011 2.3E-08   57.8  10.1   31  272-302   185-216 (276)
481 KOG0606 Microtubule-associated  97.4 2.5E-05 5.3E-10   76.8  -1.7  150  148-303   801-954 (1205)
482 KOG2270 Serine/threonine prote  97.3   0.002 4.2E-08   57.3   9.3  142  156-305   149-316 (520)
483 KOG2268 Serine/threonine prote  97.1 0.00066 1.4E-08   59.3   4.5  145  140-300    81-249 (465)
484 KOG0576 Mitogen-activated prot  97.0  0.0001 2.2E-09   69.2  -1.0  142  150-306   241-384 (829)
485 PLN02756 S-methyl-5-thioribose  97.0   0.021 4.6E-07   52.1  13.5   73  156-231    37-119 (418)
486 TIGR01767 MTRK 5-methylthiorib  96.8   0.019 4.1E-07   51.5  11.3   73  158-232     2-85  (370)
487 TIGR02906 spore_CotS spore coa  96.8   0.039 8.5E-07   48.7  13.2   29  272-301   187-215 (313)
488 cd01100 APPLE_Factor_XI_like S  96.7  0.0013 2.9E-08   44.7   2.6   33    2-37     26-58  (73)
489 COG2334 Putative homoserine ki  96.6   0.036 7.7E-07   49.4  11.8  136  163-301    37-227 (331)
490 COG3001 Uncharacterized protei  96.5   0.052 1.1E-06   45.4  11.0   74  158-235    23-99  (286)
491 PF01633 Choline_kinase:  Choli  96.5   0.012 2.5E-07   49.0   7.4  123  175-302     2-174 (211)
492 PLN02421 phosphotransferase, a  96.5   0.037 8.1E-07   49.5  11.1  141  157-302    20-213 (330)
493 PRK06148 hypothetical protein;  96.4   0.083 1.8E-06   54.4  14.5  141  157-301    31-235 (1013)
494 KOG1236 Predicted unusual prot  96.3   0.015 3.3E-07   52.5   7.4   62  221-288   319-380 (565)
495 TIGR02904 spore_ysxE spore coa  96.3   0.049 1.1E-06   48.2  10.7   32  271-302   195-226 (309)
496 PRK12396 5-methylribose kinase  96.2   0.027 5.9E-07   51.2   8.5   74  156-231    34-117 (409)
497 PRK11768 serine/threonine prot  96.1    0.24 5.3E-06   44.2  14.4   72  162-234    36-114 (325)
498 COG5072 ALK1 Serine/threonine   96.0   0.031 6.7E-07   49.9   7.4   56  246-304   317-372 (488)
499 PF07387 Seadorna_VP7:  Seadorn  95.3    0.06 1.3E-06   44.8   6.4  101  178-299    88-189 (308)
500 PTZ00384 choline kinase; Provi  95.2    0.25 5.4E-06   45.1  10.9   74  157-235    56-137 (383)

No 1  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.8e-41  Score=303.24  Aligned_cols=168  Identities=51%  Similarity=0.826  Sum_probs=154.4

Q ss_pred             CCCcccHHHHHHHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEE
Q 021046          137 WLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCC  216 (318)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~  216 (318)
                      ....|++.++..+|++|...+.||+|+||.||+|.+.++..||||++.....+...+|.+|+.++.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            56679999999999999999999999999999999999999999988865443156699999999999999999999999


Q ss_pred             EecC-eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEe
Q 021046          217 IEQG-ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       217 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                      .+.+ +.+||||||++|+|.++|+..... .++|..|++||.++|+||+|||+...++||||||||+|||+|+++++||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9999 599999999999999999875544 88999999999999999999999988899999999999999999999999


Q ss_pred             ecccceeecC
Q 021046          296 DFGMARIFGG  305 (318)
Q Consensus       296 DfGla~~~~~  305 (318)
                      |||||+....
T Consensus       220 DFGLa~~~~~  229 (361)
T KOG1187|consen  220 DFGLAKLGPE  229 (361)
T ss_pred             CccCcccCCc
Confidence            9999976543


No 2  
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=2.7e-37  Score=266.15  Aligned_cols=161  Identities=30%  Similarity=0.529  Sum_probs=140.4

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ...+|...+.||+|+|+.||+|+++ ++..||||.+.+.  .....+.+..|+.+|+.++|||||+|++++..++..|||
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            3468888899999999999999874 5789999998765  445566789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC------CCceEeeccc
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD------MNPKISDFGM  299 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~------~~~ki~DfGl  299 (318)
                      ||||++|+|..|++.   ...+++.+...++.|+|.||++||+++   ||||||||+||||+..      -.+||+|||+
T Consensus        88 MEyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf  161 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGF  161 (429)
T ss_pred             EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccch
Confidence            999999999999953   457999999999999999999999988   9999999999999775      3589999999


Q ss_pred             ceeecCCccccccceeecC
Q 021046          300 ARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       300 a~~~~~~~~~~~~~~~~Gt  318 (318)
                      ||.+.....   ..+.+||
T Consensus       162 AR~L~~~~~---a~tlcGS  177 (429)
T KOG0595|consen  162 ARFLQPGSM---AETLCGS  177 (429)
T ss_pred             hhhCCchhH---HHHhhCC
Confidence            999985543   3344554


No 3  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.5e-35  Score=255.45  Aligned_cols=161  Identities=28%  Similarity=0.441  Sum_probs=137.8

Q ss_pred             HhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCCCc-------CHHHHHHHHHHHhccCCCccceEEEEEEecC
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQ-------GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~  220 (318)
                      ..+.|.+.+.||+|+||.|-+|. -++|+.||||++++....       ......+|+++|++|+|||||++++++...+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            34567888999999999999995 467999999999764211       2234579999999999999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC---CCceEeec
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD---MNPKISDF  297 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~---~~~ki~Df  297 (318)
                      ..||||||++||+|-+++.   .+..+.+.....+++|++.|+.|||+++   |+||||||+|||+..+   ..+||+||
T Consensus       250 s~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             ceEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence            9999999999999988874   3456777888899999999999999998   9999999999999776   77999999


Q ss_pred             ccceeecCCccccccceeecC
Q 021046          298 GMARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       298 Gla~~~~~~~~~~~~~~~~Gt  318 (318)
                      |||++.+...   .+++++||
T Consensus       324 GlAK~~g~~s---fm~TlCGT  341 (475)
T KOG0615|consen  324 GLAKVSGEGS---FMKTLCGT  341 (475)
T ss_pred             chhhccccce---ehhhhcCC
Confidence            9999987544   35567887


No 4  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00  E-value=2.3e-34  Score=255.92  Aligned_cols=153  Identities=39%  Similarity=0.619  Sum_probs=134.7

Q ss_pred             cCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCc--CHHHHHHHHHHHhccCCCccceEEEEEEecC-eeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ--GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-ENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e  227 (318)
                      .++...+.||+|+||+||+|.+.....||||++......  ..++|.+|+.+|.+++|||||+++|+|.+.. ...+|||
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            344555679999999999999976556999999864322  2568999999999999999999999999987 7999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla~~~~~~  306 (318)
                      |+++|+|..+++.. ....+++..++.++.|||+||.|||++..  ||||||||+|+|++.++ ++||+|||+++.....
T Consensus       121 y~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             eCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            99999999999764 46789999999999999999999999763  99999999999999998 9999999999987653


No 5  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2e-34  Score=259.74  Aligned_cols=160  Identities=31%  Similarity=0.478  Sum_probs=145.3

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      .+|...+.||+|+|+.+|+++. .+|+.||+|++.+.   .....+...+|+++.++|+|||||+++++|++.++.|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5799999999999999999987 78999999999763   3445677899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+|++|+|..++.   ....+++.++.++..||+.||.|||+++   |||||||..|++++++.++||+|||||..+..+
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence            9999999998883   5678999999999999999999999987   999999999999999999999999999999877


Q ss_pred             ccccccceeecC
Q 021046          307 ELQGNTKRIVGT  318 (318)
Q Consensus       307 ~~~~~~~~~~Gt  318 (318)
                      +.+  ..+++||
T Consensus       172 ~Er--k~TlCGT  181 (592)
T KOG0575|consen  172 GER--KKTLCGT  181 (592)
T ss_pred             ccc--cceecCC
Confidence            544  3457887


No 6  
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00  E-value=1.3e-34  Score=257.93  Aligned_cols=157  Identities=38%  Similarity=0.613  Sum_probs=140.9

Q ss_pred             HHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ...+.+...+.||+|.||.||.|.+.....||+|.++.. ....++|.+|+.+|++|+|+|||+++|+|..+++++||||
T Consensus       203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE  281 (468)
T KOG0197|consen  203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE  281 (468)
T ss_pred             ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence            344556677899999999999999988789999999864 3455789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      ||+.|+|.+||.. .....++..+.+.++.|||+||+||++++   +|||||.++||||+++..+||+||||||...+++
T Consensus       282 ~m~~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~  357 (468)
T KOG0197|consen  282 YMPKGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDE  357 (468)
T ss_pred             ecccCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence            9999999999965 34677888999999999999999999988   9999999999999999999999999999776665


Q ss_pred             cc
Q 021046          308 LQ  309 (318)
Q Consensus       308 ~~  309 (318)
                      ..
T Consensus       358 Y~  359 (468)
T KOG0197|consen  358 YT  359 (468)
T ss_pred             ee
Confidence            53


No 7  
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=5.6e-34  Score=251.32  Aligned_cols=162  Identities=30%  Similarity=0.467  Sum_probs=138.8

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~  223 (318)
                      ..+.|+.+++||+|+||.||+|+. .+|+.||+|+++-..  +....-..+||.+|++|+||||++|.+..++.  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            456788899999999999999964 679999999887543  34445568999999999999999999999887  6899


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||+|||++ ||.-++.  .....+++.++..+++|++.||+|+|+++   |+|||||.+|||||.+|.+||+|||||+++
T Consensus       195 lVFeYMdh-DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFY  268 (560)
T ss_pred             EEEecccc-hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeec
Confidence            99999987 5555552  33567899999999999999999999998   999999999999999999999999999999


Q ss_pred             cCCccccccceee
Q 021046          304 GGDELQGNTKRIV  316 (318)
Q Consensus       304 ~~~~~~~~~~~~~  316 (318)
                      ..+.....|.+++
T Consensus       269 ~~~~~~~~T~rVv  281 (560)
T KOG0600|consen  269 TPSGSAPYTSRVV  281 (560)
T ss_pred             cCCCCcccccceE
Confidence            8877655565554


No 8  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=4.1e-34  Score=244.28  Aligned_cols=159  Identities=31%  Similarity=0.426  Sum_probs=137.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCe-eEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE-NILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e  227 (318)
                      .+++....||+|..|.||++.++ +++.+|+|.+... .+...+++.+|++++.+.+||+||.++|.|..++. ..++||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            45667789999999999999874 6788999998543 34456788999999999999999999999999994 999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      ||++|||+.++.   ....+++...-.|+.++++||.|||+.  .+||||||||+|+|+++.|++||+|||.++.+.+. 
T Consensus       159 YMDgGSLd~~~k---~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  159 YMDGGSLDDILK---RVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             hcCCCCHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence            999999999983   336689999999999999999999963  24999999999999999999999999999988765 


Q ss_pred             cccccceeecC
Q 021046          308 LQGNTKRIVGT  318 (318)
Q Consensus       308 ~~~~~~~~~Gt  318 (318)
                         ....++||
T Consensus       233 ---~a~tfvGT  240 (364)
T KOG0581|consen  233 ---IANTFVGT  240 (364)
T ss_pred             ---hccccccc
Confidence               33455666


No 9  
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00  E-value=1e-33  Score=241.70  Aligned_cols=162  Identities=28%  Similarity=0.402  Sum_probs=142.1

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..++|++.+.||+|+||+||.++. .+++.+|+|.+++..   ....+....|..+|.+++||+||+++-.|++.+.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            457899999999999999999975 458899999998652   2345678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+||++||.|...|   ++...+++..+..++..|+.||.|||+.+   ||||||||+|||+|.+|+++|+||||++.--
T Consensus       103 Vld~~~GGeLf~hL---~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  103 VLDYLNGGELFYHL---QREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EEeccCCccHHHHH---HhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            99999999998888   34567888888888999999999999998   9999999999999999999999999999655


Q ss_pred             CCccccccceeecC
Q 021046          305 GDELQGNTKRIVGT  318 (318)
Q Consensus       305 ~~~~~~~~~~~~Gt  318 (318)
                      .++.  .+.+++||
T Consensus       177 ~~~~--~t~tfcGT  188 (357)
T KOG0598|consen  177 KDGD--ATRTFCGT  188 (357)
T ss_pred             cCCC--ccccccCC
Confidence            4432  35568888


No 10 
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00  E-value=2.6e-33  Score=261.35  Aligned_cols=153  Identities=34%  Similarity=0.541  Sum_probs=134.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecC
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~  220 (318)
                      ....+....+.||+|+||+||+|+..      +...||||.++..... ...+|++|+++++.++|||||+|+|+|.+++
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            34566777889999999999999753      3457999999976555 6789999999999999999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKK-----------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD  289 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~  289 (318)
                      +++||+|||..|||.+||.....           ...|+..+.+.||.|||.||+||-++.   +|||||.++|+||.++
T Consensus       563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGEN  639 (774)
T ss_pred             eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccc
Confidence            99999999999999999964321           223888999999999999999999877   9999999999999999


Q ss_pred             CCceEeecccceee
Q 021046          290 MNPKISDFGMARIF  303 (318)
Q Consensus       290 ~~~ki~DfGla~~~  303 (318)
                      ..|||+||||+|-.
T Consensus       640 l~VKIsDfGLsRdi  653 (774)
T KOG1026|consen  640 LVVKISDFGLSRDI  653 (774)
T ss_pred             eEEEecccccchhh
Confidence            99999999999643


No 11 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98  E-value=8.4e-33  Score=242.12  Aligned_cols=161  Identities=34%  Similarity=0.526  Sum_probs=139.7

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHh--ccCCCccceEEEEEEecC----eeE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIA--KLQHRHLVRLFGCCIEQG----ENI  223 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~~~  223 (318)
                      .......+.+|+|.||.||+|.+. ++.||||++..   +..+.|.+|-.+.+  .++|+||++++++-...+    +++
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            345566789999999999999985 48999999975   34456777777665  468999999999987766    889


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------CCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY------SRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~------~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                      ||+||.++|+|.+||    ....++|....+|+..|++||+|||+.      .+++|+|||||++||||.+++++.|+||
T Consensus       285 LVt~fh~kGsL~dyL----~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYL----KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             EEeeeccCCcHHHHH----HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            999999999999999    456799999999999999999999963      4568999999999999999999999999


Q ss_pred             ccceeecCCccccccceeecC
Q 021046          298 GMARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       298 Gla~~~~~~~~~~~~~~~~Gt  318 (318)
                      |||.++..+..++.+...+||
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT  381 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGT  381 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhh
Confidence            999999988777777778887


No 12 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.98  E-value=1.7e-32  Score=243.83  Aligned_cols=152  Identities=32%  Similarity=0.451  Sum_probs=136.3

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~  223 (318)
                      ...+|..++.||+|+|++|++|+. .+++++|||++.+.   .....+-...|-..|.+| .||.|++|+-.|.++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            457899999999999999999975 56889999998764   233445567788888898 8999999999999999999


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|+||+++|+|.+++   .+...|++.....++.+|+.||+|||+.+   ||||||||+|||+|.++++||+|||-|+++
T Consensus       151 FvLe~A~nGdll~~i---~K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLI---KKYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEecCCCcHHHHH---HHhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccC
Confidence            999999999999999   34578999999999999999999999988   999999999999999999999999999999


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ++.
T Consensus       225 ~~~  227 (604)
T KOG0592|consen  225 SPS  227 (604)
T ss_pred             Chh
Confidence            764


No 13 
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98  E-value=5.7e-34  Score=234.71  Aligned_cols=167  Identities=28%  Similarity=0.467  Sum_probs=141.2

Q ss_pred             hcCCccccccccCCcccEEEEE-ecCCcEEEEEEccC--CCCcCHHHHHHHHHHHhccCCCccceEEE-EEEecCe-eEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRHLVRLFG-CCIEQGE-NIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~l  224 (318)
                      ..+|++.++||+|.||.||++. ..+|..||.|.+.=  .+....++...|+.+|++|+|||||++++ -+.++++ +++
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            4578899999999999999996 57899999998762  24445667899999999999999999998 4555555 799


Q ss_pred             EEEeccCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          225 IYEYMPNKSLDVFLFY-PKKKRLLGWQARVRIIEGIAQGLLYLHQYS-RLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ||||+.+|+|...+.. .+..+.++++++++++.|++.||..+|++- +..|+||||||.||+++.+|.+||+||||+|+
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~  177 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF  177 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence            9999999999998864 345778999999999999999999999832 12499999999999999999999999999999


Q ss_pred             ecCCccccccceeecC
Q 021046          303 FGGDELQGNTKRIVGT  318 (318)
Q Consensus       303 ~~~~~~~~~~~~~~Gt  318 (318)
                      +..+..  -+...+||
T Consensus       178 l~s~~t--fA~S~VGT  191 (375)
T KOG0591|consen  178 LSSKTT--FAHSLVGT  191 (375)
T ss_pred             hcchhH--HHHhhcCC
Confidence            976643  34456776


No 14 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.98  E-value=4.9e-32  Score=221.63  Aligned_cols=150  Identities=34%  Similarity=0.570  Sum_probs=132.0

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC-cC-HHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG-QG-LTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|...+++|+|.||.||+|+. .+|+.||||+++.... .+ .....+|++.|+.++||||+.|+++|.+.+...||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4678889999999999999975 6799999999975422 12 3457899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+- +|...+.  .+...++..+...++.++++|++|||.+.   |+||||||.|+|++++|.+||+|||+|+.++..
T Consensus        82 fm~t-dLe~vIk--d~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   82 FMPT-DLEVVIK--DKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             eccc-cHHHHhc--ccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            9964 7877773  34667889999999999999999999987   999999999999999999999999999999753


No 15 
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97  E-value=9.5e-33  Score=246.99  Aligned_cols=153  Identities=32%  Similarity=0.511  Sum_probs=134.1

Q ss_pred             HHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcC-HHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      .+.+.....++||+|.||.|.+++...+..||||+++...... ..+|.+|+++|.+++||||++|+|+|..++++++++
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            3445566778999999999999999888999999999765544 479999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |||++|+|.+|+..... ..+.-....+|+.|||.||+||.+..   +|||||.++|+|++.++++||+||||+|-+-
T Consensus       615 EYmEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~ly  688 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLY  688 (807)
T ss_pred             HHHhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccc
Confidence            99999999999965432 22445566789999999999999876   9999999999999999999999999998553


No 16 
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.97  E-value=9.4e-33  Score=237.84  Aligned_cols=153  Identities=25%  Similarity=0.523  Sum_probs=138.8

Q ss_pred             hcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ..+|++.+.||+|.||+|-+|. ...|+.||||.+++..   .+..-.+.+|+++|..|+||||++++.+|...+...+|
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            4578899999999999999996 4789999999988653   34445678999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||..+|.|.+|+   .....|++.+...++.||..|+.|+|.+.   ++|||||.+|||+|.++.+||+||||+.++..
T Consensus       132 MEYaS~GeLYDYi---Ser~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  132 MEYASGGELYDYI---SERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EEecCCccHHHHH---HHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence            9999999999999   45677999999999999999999999887   99999999999999999999999999999876


Q ss_pred             Ccc
Q 021046          306 DEL  308 (318)
Q Consensus       306 ~~~  308 (318)
                      +.+
T Consensus       206 ~kf  208 (668)
T KOG0611|consen  206 KKF  208 (668)
T ss_pred             ccH
Confidence            653


No 17 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.97  E-value=1.2e-32  Score=229.01  Aligned_cols=149  Identities=26%  Similarity=0.396  Sum_probs=131.6

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +.|+...++|+|+||.||+++.+ +|+.||||++.....  .-.+-.++|+++|++++|||+|.|+.+|.....++||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            45777889999999999999875 599999999975432  223456899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |++..-|++.-.   ....++......+..|++.|+.|+|++.   +|||||||+||||+.++.+||+|||+|+.+..
T Consensus        82 ~~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   82 YCDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             ecchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            999988877653   3456788999999999999999999987   99999999999999999999999999999974


No 18 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.97  E-value=1.1e-31  Score=222.60  Aligned_cols=158  Identities=32%  Similarity=0.453  Sum_probs=140.1

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      .++|+..+.||.|+||.|.+.+.+ +|..+|+|++++..   ..+.+...+|..+|+.+.||++++|++.|.+.+..+||
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            468899999999999999999874 57889999998643   23445577899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||++||.|..+++   +...+++..+..++.||+.||+|||+.+   |++|||||+|||+|++|.+||+|||+|+...+
T Consensus       123 meyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  123 MEYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             EeccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            99999999999993   4567899999999999999999999988   99999999999999999999999999998854


Q ss_pred             CccccccceeecC
Q 021046          306 DELQGNTKRIVGT  318 (318)
Q Consensus       306 ~~~~~~~~~~~Gt  318 (318)
                      .     |-+++||
T Consensus       197 r-----T~TlCGT  204 (355)
T KOG0616|consen  197 R-----TWTLCGT  204 (355)
T ss_pred             c-----EEEecCC
Confidence            3     4567776


No 19 
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97  E-value=3.9e-31  Score=238.95  Aligned_cols=153  Identities=35%  Similarity=0.510  Sum_probs=133.3

Q ss_pred             HHHhcCCccccccccCCcccEEEEEecC--C---cEEEEEEccC---CCCcCHHHHHHHHHHHhccCCCccceEEEEEEe
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRLLN--G---QEVAVKRLSN---QSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE  218 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~--~---~~vavK~l~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~  218 (318)
                      +...++....++||+|+||.||+|++..  +   ..||||..+.   .......+|.+|+++|..++|||||+++|++..
T Consensus       153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~  232 (474)
T KOG0194|consen  153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL  232 (474)
T ss_pred             EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence            3445666677899999999999997643  2   2389998875   234567789999999999999999999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      +.++++|||+|+||+|+++|...  ...++..++..++.+.|+||+|||++.   +|||||.++|+|++.++.+||+|||
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~--~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFG  307 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKN--KKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFG  307 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccc
Confidence            99999999999999999999533  236899999999999999999999988   9999999999999999999999999


Q ss_pred             cceeec
Q 021046          299 MARIFG  304 (318)
Q Consensus       299 la~~~~  304 (318)
                      |++.-.
T Consensus       308 Ls~~~~  313 (474)
T KOG0194|consen  308 LSRAGS  313 (474)
T ss_pred             cccCCc
Confidence            987543


No 20 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=1.8e-30  Score=224.69  Aligned_cols=151  Identities=30%  Similarity=0.486  Sum_probs=131.7

Q ss_pred             hcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecC--eeEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG--ENILIY  226 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  226 (318)
                      ..++...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+++|......  ..++.|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            3457778899999999999998754 8899999887653333677899999999999999999999855444  689999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|.+++.... . .+++..+..+..||++||+|||+++   ||||||||+|||++. ++.+||+|||+|+....
T Consensus        96 Ey~~~GsL~~~~~~~g-~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYG-G-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eccCCCcHHHHHHHcC-C-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            9999999999984322 2 6999999999999999999999988   999999999999999 79999999999998874


No 21 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=2.4e-30  Score=232.10  Aligned_cols=162  Identities=28%  Similarity=0.444  Sum_probs=138.5

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC----CC-cCHHHHHHHHHHHhccC-CCccceEEEEEEecC
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ----SG-QGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQG  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~  220 (318)
                      ...++|...+.||+|+||+|+.|.. .++..||+|.+.+.    .. ...+.+.+|+.++++++ ||||++++.++...+
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3457899999999999999999965 56899999977653    11 23445678999999999 999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC-CCceEeeccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD-MNPKISDFGM  299 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~-~~~ki~DfGl  299 (318)
                      ..++||||+.+|+|.+++..   ...+.+..+..++.|++.|++|+|+++   |+||||||+|+|++.+ +.+||+|||+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence            99999999999999999843   466888999999999999999999988   9999999999999999 9999999999


Q ss_pred             ceeec-CCccccccceeecC
Q 021046          300 ARIFG-GDELQGNTKRIVGT  318 (318)
Q Consensus       300 a~~~~-~~~~~~~~~~~~Gt  318 (318)
                      +.... .+.   ...+.+||
T Consensus       168 s~~~~~~~~---~l~t~cGs  184 (370)
T KOG0583|consen  168 SAISPGEDG---LLKTFCGS  184 (370)
T ss_pred             ccccCCCCC---cccCCCCC
Confidence            99884 332   23445565


No 22 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97  E-value=1.9e-30  Score=230.75  Aligned_cols=152  Identities=26%  Similarity=0.383  Sum_probs=136.5

Q ss_pred             HHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCee
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  222 (318)
                      ....++|+.+..||+|+||.||+++- .+|..+|+|++++..   ..+....+.|-.+|...++|.||+|+-.|.+.+++
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            34578999999999999999999975 569999999998753   34456788999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ||||||+|||++..+|   .....|++..+..++.+++.|++-+|+.+   +|||||||+|+|||..|++||+||||+.-
T Consensus       217 YLiMEylPGGD~mTLL---~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLL---MRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             EEEEEecCCccHHHHH---HhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccch
Confidence            9999999999999988   34567899988999999999999999988   99999999999999999999999999975


Q ss_pred             ec
Q 021046          303 FG  304 (318)
Q Consensus       303 ~~  304 (318)
                      +.
T Consensus       291 l~  292 (550)
T KOG0605|consen  291 LD  292 (550)
T ss_pred             hh
Confidence            54


No 23 
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97  E-value=1.4e-31  Score=246.47  Aligned_cols=151  Identities=34%  Similarity=0.539  Sum_probs=135.8

Q ss_pred             CCccccccccCCcccEEEEEecC----CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ...+.+.||.|.||.|++|+++-    ...||||.|+... +....+|+.|+.+|.+.+||||++|.|+.+...+..+|+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            44577899999999999998743    3469999999764 455678999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |||+||+|+.||+...  ..+.+.+...+.++||.||+||-+.+   +|||||.++||||+++..+|++||||+|.+.+|
T Consensus       710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccC
Confidence            9999999999996543  45889999999999999999999877   999999999999999999999999999999776


Q ss_pred             c
Q 021046          307 E  307 (318)
Q Consensus       307 ~  307 (318)
                      .
T Consensus       785 ~  785 (996)
T KOG0196|consen  785 P  785 (996)
T ss_pred             C
Confidence            5


No 24 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=3.2e-30  Score=226.03  Aligned_cols=150  Identities=31%  Similarity=0.485  Sum_probs=129.1

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--------------CcCHHHHHHHHHHHhccCCCccceE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--------------GQGLTEFKNEMMLIAKLQHRHLVRL  212 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--------------~~~~~~~~~e~~~l~~l~h~niv~l  212 (318)
                      ...++|++.+.||+|.||.|-+|.. .+++.||||++.+..              ....+...+|+.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            4567899999999999999999975 468899999987531              1123578999999999999999999


Q ss_pred             EEEEEec--CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC
Q 021046          213 FGCCIEQ--GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM  290 (318)
Q Consensus       213 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~  290 (318)
                      +.+.-+.  +..|||+|||..|.+...   ......+++.+++.++.++..||+|||.++   ||||||||+|+||+++|
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g  247 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG  247 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence            9998754  678999999999987432   222333899999999999999999999998   99999999999999999


Q ss_pred             CceEeecccceee
Q 021046          291 NPKISDFGMARIF  303 (318)
Q Consensus       291 ~~ki~DfGla~~~  303 (318)
                      ++||+|||.+-..
T Consensus       248 ~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  248 TVKISDFGVSNEF  260 (576)
T ss_pred             cEEeeccceeeec
Confidence            9999999999877


No 25 
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.3e-30  Score=226.85  Aligned_cols=165  Identities=28%  Similarity=0.442  Sum_probs=139.4

Q ss_pred             CCCCCCCCCcccHHHHHHHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhc--cCCCc
Q 021046          131 DKSKDSWLPLFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK--LQHRH  208 (318)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~--l~h~n  208 (318)
                      .+.+.+++|.+...++.   .+..+.+.||+|.||.||+|.+. |+.||||++...++   +.+.+|.++...  |+|+|
T Consensus       194 tSGSGSGlplLVQRTia---rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHEN  266 (513)
T KOG2052|consen  194 TSGSGSGLPLLVQRTIA---RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHEN  266 (513)
T ss_pred             cCCCCCCchhHhHHhhh---heeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccch
Confidence            44556778877665544   56778899999999999999994 78999999976443   456677777664  69999


Q ss_pred             cceEEEEEEecC----eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCC
Q 021046          209 LVRLFGCCIEQG----ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH-----QYSRLRIIHRDL  279 (318)
Q Consensus       209 iv~l~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH-----~~~~~~ivH~Dl  279 (318)
                      |+.+++.-..++    .+|||++|.++|||.+||    ....++-...++++..+|.||++||     .++++.|.||||
T Consensus       267 ILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL----~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDl  342 (513)
T KOG2052|consen  267 ILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYL----NRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDL  342 (513)
T ss_pred             hhhhhhccccCCCceEEEEEeeecccCCcHHHHH----hhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccc
Confidence            999998765543    679999999999999999    3467889999999999999999999     468899999999


Q ss_pred             CCCCEEEcCCCCceEeecccceeecCC
Q 021046          280 KASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       280 k~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+.||||.+++++.|+|+|||-....+
T Consensus       343 KSKNILVKkn~~C~IADLGLAv~h~~~  369 (513)
T KOG2052|consen  343 KSKNILVKKNGTCCIADLGLAVRHDSD  369 (513)
T ss_pred             ccccEEEccCCcEEEeeceeeEEeccc
Confidence            999999999999999999999887765


No 26 
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.97  E-value=9.9e-31  Score=233.50  Aligned_cols=159  Identities=30%  Similarity=0.469  Sum_probs=140.8

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|.+.+.||+|.||.||+|+.+ +.+.||+|.+.+.  .....+.+.+|++++++++||||+.++++|....+.|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            57888899999999999999754 5789999998764  33456678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      |+.+ +|..++   .....++++.+..++.++..||.|||+..   |+|||+||+|||++.++.+|++|||+||.++.+.
T Consensus        82 ~a~g-~L~~il---~~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   82 YAVG-DLFTIL---EQDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhh-hHHHHH---HhccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9987 999998   34567999999999999999999999987   9999999999999999999999999999887654


Q ss_pred             cccccceeecC
Q 021046          308 LQGNTKRIVGT  318 (318)
Q Consensus       308 ~~~~~~~~~Gt  318 (318)
                      +  +.++|.||
T Consensus       155 ~--vltsikGt  163 (808)
T KOG0597|consen  155 S--VLTSIKGT  163 (808)
T ss_pred             e--eeeeccCc
Confidence            3  45677776


No 27 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.4e-31  Score=231.57  Aligned_cols=151  Identities=29%  Similarity=0.448  Sum_probs=132.5

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHH--HHHHHHHHhccC-CCccceEEEEEEecC-eeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTE--FKNEMMLIAKLQ-HRHLVRLFGCCIEQG-ENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~--~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~  223 (318)
                      ..++|...++||.|+||.||+|+. .++..||||++++.-.. +++  -++|+..|++|+ ||||++|.+++.+.+ .++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            457899999999999999999975 56889999999875322 343  368999999998 999999999999988 899


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|||||+. +|.+++..  +++.+++.++..|+.||++||+|+|.+|   +.|||+||+|||+..+..+||+||||||-.
T Consensus        87 fVfE~Md~-NLYqLmK~--R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   87 FVFEFMDC-NLYQLMKD--RNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             eeHHhhhh-hHHHHHhh--cCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence            99999965 67777743  3788999999999999999999999988   999999999999999999999999999977


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ...
T Consensus       161 ~Sk  163 (538)
T KOG0661|consen  161 RSK  163 (538)
T ss_pred             ccC
Confidence            543


No 28 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.96  E-value=1.1e-29  Score=216.83  Aligned_cols=151  Identities=31%  Similarity=0.490  Sum_probs=128.8

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC-c-CHHHHHHHHHHHhccCCCc-cceEEEEEEecC-----
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG-Q-GLTEFKNEMMLIAKLQHRH-LVRLFGCCIEQG-----  220 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~-~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~-----  220 (318)
                      ...|...++||+|+||.||+|+. .+|+.||+|+++-... + .-....+|+.++++++|+| |++|++++...+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            45677788999999999999975 5688999999875433 2 2235688999999999999 999999999887     


Q ss_pred             -eeEEEEEeccCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          221 -ENILIYEYMPNKSLDVFLFYPKKK-RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       221 -~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                       ..++|+||++. +|..++...... ..++...+..++.||++||+|||+++   |+||||||+|+||+++|.+||+|||
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG  165 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG  165 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence             78899999964 788888543221 45777889999999999999999988   9999999999999999999999999


Q ss_pred             cceeec
Q 021046          299 MARIFG  304 (318)
Q Consensus       299 la~~~~  304 (318)
                      +|+.++
T Consensus       166 lAra~~  171 (323)
T KOG0594|consen  166 LARAFS  171 (323)
T ss_pred             hHHHhc
Confidence            999765


No 29 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.96  E-value=3.6e-30  Score=216.90  Aligned_cols=153  Identities=28%  Similarity=0.429  Sum_probs=130.3

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC-cC-HHHHHHHHHHHhccCCCccceEEEEEEec--Cee
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG-QG-LTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~  222 (318)
                      ...++|+.++.|++|+||.||+|+. ++++.||+|+++.... .+ --..++|+.+|.+.+|||||.+-.+....  +..
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            3457899999999999999999986 4678999999985422 11 12357899999999999999998887643  679


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      |+|||||+. +|...+...  ...+...+...+..|+++|++|||...   |+||||||+|+|++..|.+||+||||||.
T Consensus       153 y~VMe~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  153 YIVMEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLARE  226 (419)
T ss_pred             eeeHHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhh
Confidence            999999986 677777443  357888899999999999999999887   99999999999999999999999999999


Q ss_pred             ecCC
Q 021046          303 FGGD  306 (318)
Q Consensus       303 ~~~~  306 (318)
                      ++..
T Consensus       227 ygsp  230 (419)
T KOG0663|consen  227 YGSP  230 (419)
T ss_pred             hcCC
Confidence            9765


No 30 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=9.8e-30  Score=232.12  Aligned_cols=163  Identities=27%  Similarity=0.420  Sum_probs=139.3

Q ss_pred             HHHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCe
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~  221 (318)
                      ....++|...++||+|+||+|+++..+ +++.+|||.+++..   ....+..+.|-+++.-. +||.++.|+.+|++.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            345678999999999999999999875 47789999998763   34556677888877766 59999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      ++.||||+.||++..+.    ....+++..+..++..++.||.|||+++   ||+||||.+|||+|.+|.+||+||||+|
T Consensus       444 l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             EEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccc
Confidence            99999999999954433    3467899999999999999999999988   9999999999999999999999999998


Q ss_pred             eecCCccccccceeecC
Q 021046          302 IFGGDELQGNTKRIVGT  318 (318)
Q Consensus       302 ~~~~~~~~~~~~~~~Gt  318 (318)
                      ---..+  ..|.+++||
T Consensus       517 e~m~~g--~~TsTfCGT  531 (694)
T KOG0694|consen  517 EGMGQG--DRTSTFCGT  531 (694)
T ss_pred             ccCCCC--CccccccCC
Confidence            544322  357789998


No 31 
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96  E-value=1.5e-30  Score=209.88  Aligned_cols=162  Identities=31%  Similarity=0.433  Sum_probs=138.1

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..++|++++.||+|.||.||.|+. +++-.||+|++.+.   ..+....+.+|+++-+.|+||||++++++|.+....||
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            457899999999999999999976 45678999988753   22334578899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++||.++|+|...|... ....+++.....+..|+|.||.|+|...   +|||||||+|+|++..+.+||+|||-+..-.
T Consensus       100 ilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            99999999999888532 3456788888899999999999999877   9999999999999999999999999987543


Q ss_pred             CCccccccceeecC
Q 021046          305 GDELQGNTKRIVGT  318 (318)
Q Consensus       305 ~~~~~~~~~~~~Gt  318 (318)
                      .    ...++++||
T Consensus       176 ~----~kR~tlcgt  185 (281)
T KOG0580|consen  176 S----NKRKTLCGT  185 (281)
T ss_pred             C----CCceeeecc
Confidence            2    223456666


No 32 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=9.1e-30  Score=227.92  Aligned_cols=161  Identities=31%  Similarity=0.486  Sum_probs=142.6

Q ss_pred             HhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ....|....+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.+...+++|+|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            34577777899999999999996 46688999999987555555668899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      ||++|+|.+..    ....+++.++..|++++++||+|||.++   |+|||||.+|||++.+|.+||+|||++..+....
T Consensus       351 ym~ggsLTDvV----t~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~  423 (550)
T KOG0578|consen  351 YMEGGSLTDVV----TKTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ  423 (550)
T ss_pred             ecCCCchhhhh----hcccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence            99999998887    3445899999999999999999999998   9999999999999999999999999999987766


Q ss_pred             cccccceeecC
Q 021046          308 LQGNTKRIVGT  318 (318)
Q Consensus       308 ~~~~~~~~~Gt  318 (318)
                      .  ....++||
T Consensus       424 ~--KR~TmVGT  432 (550)
T KOG0578|consen  424 S--KRSTMVGT  432 (550)
T ss_pred             C--ccccccCC
Confidence            5  34567887


No 33 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96  E-value=1.9e-29  Score=226.31  Aligned_cols=155  Identities=28%  Similarity=0.412  Sum_probs=130.4

Q ss_pred             HHhcCCccccccccCCcccEEEEEe------cCCcEEEEEEccCCCC-cCHHHHHHHHHHHhcc-CCCccceEEEEEEec
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ  219 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~  219 (318)
                      .+.++|.+.++||+|+||.||+|..      .++..||||+++.... .....+.+|+.++..+ +||||++++++|...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP   83 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence            3457899999999999999999974      2346799999875432 2345789999999999 899999999998765


Q ss_pred             C-eeEEEEEeccCCChhhhhhcCCC-------------------------------------------------------
Q 021046          220 G-ENILIYEYMPNKSLDVFLFYPKK-------------------------------------------------------  243 (318)
Q Consensus       220 ~-~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------------------------  243 (318)
                      + ..++||||+++|+|.+++.....                                                       
T Consensus        84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (338)
T cd05102          84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET  163 (338)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence            4 57899999999999988854211                                                       


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          244 ----KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       244 ----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                          ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~  226 (338)
T cd05102         164 DDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK  226 (338)
T ss_pred             cccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeeccccccccc
Confidence                134788899999999999999999987   99999999999999999999999999987643


No 34 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96  E-value=4.9e-29  Score=220.34  Aligned_cols=153  Identities=31%  Similarity=0.520  Sum_probs=131.0

Q ss_pred             hcCCccccccccCCcccEEEEEecC-----------------CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccce
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-----------------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVR  211 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~  211 (318)
                      .++|...++||+|+||.||++.+.+                 +..||+|.+.... .....+|.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3578888999999999999997532                 3369999887543 233457999999999999999999


Q ss_pred             EEEEEEecCeeEEEEEeccCCChhhhhhcCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 021046          212 LFGCCIEQGENILIYEYMPNKSLDVFLFYPK----------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRII  275 (318)
Q Consensus       212 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv  275 (318)
                      +++++.+.+..++||||+++|+|.+++....                ....+++.....++.|++.||.|||+.+   |+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence            9999999999999999999999998875321                1235788899999999999999999987   99


Q ss_pred             ecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          276 HRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       276 H~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||||||+|||++.++.+||+|||+++.+..
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~  190 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYA  190 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceeccc
Confidence            999999999999999999999999986643


No 35 
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.96  E-value=1.3e-29  Score=244.47  Aligned_cols=151  Identities=36%  Similarity=0.606  Sum_probs=133.9

Q ss_pred             hcCCccccccccCCcccEEEEEecC--Cc----EEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCee
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN--GQ----EVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~--~~----~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  222 (318)
                      ..+....+.||+|.||.||+|...+  +.    .||||.+++. +.+...+|.+|..+|+.++|||||+++|+|.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            4456677899999999999998643  32    4999999875 345677999999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          223 ILIYEYMPNKSLDVFLFYPKK----KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      ++++|||++|+|..||...+.    ...+...+.+.++.|||+|+.||++++   +|||||.++|+||+....+||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence            999999999999999975432    467889999999999999999999987   9999999999999999999999999


Q ss_pred             cceee
Q 021046          299 MARIF  303 (318)
Q Consensus       299 la~~~  303 (318)
                      |||.+
T Consensus       848 lArDi  852 (1025)
T KOG1095|consen  848 LARDI  852 (1025)
T ss_pred             hhHhh
Confidence            99933


No 36 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.96  E-value=1.4e-29  Score=227.95  Aligned_cols=155  Identities=35%  Similarity=0.583  Sum_probs=137.3

Q ss_pred             cHHHHHHHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEec
Q 021046          142 SLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ  219 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~  219 (318)
                      +.+.+++..+.+.+.+.||+|.||+||+|.|-+  .||||.++...  .+..+.|++|+..+++-+|.||+-+.|+|..+
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            345566677788889999999999999998853  69999998653  34678999999999999999999999999998


Q ss_pred             CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          220 GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                      .. .+|+.+|+|-+|..+++..+  ..|+..+...|+.|||+||.|||.++   |||||||..||++.+++.|||+||||
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGL  534 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGL  534 (678)
T ss_pred             ce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccc
Confidence            77 99999999999999997653  56888899999999999999999998   99999999999999999999999999


Q ss_pred             ceeec
Q 021046          300 ARIFG  304 (318)
Q Consensus       300 a~~~~  304 (318)
                      |..-.
T Consensus       535 atvk~  539 (678)
T KOG0193|consen  535 ATVKT  539 (678)
T ss_pred             eeeee
Confidence            96543


No 37 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96  E-value=1.2e-28  Score=220.98  Aligned_cols=151  Identities=26%  Similarity=0.387  Sum_probs=132.9

Q ss_pred             HhcCCccccccccCCcccEEEEEecC--CcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ..++|...+.||+|+||.||+|...+  +..||+|.+...   .....+.+.+|+.++..++||||+++++++.+.+..+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            34679999999999999999997643  368999988643   2234567889999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||+++|+|.+++.   ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus       108 lv~Ey~~~g~L~~~i~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~  181 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLR---RNKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVV  181 (340)
T ss_pred             EEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence            9999999999999884   3346889999999999999999999987   999999999999999999999999999876


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       182 ~~  183 (340)
T PTZ00426        182 DT  183 (340)
T ss_pred             CC
Confidence            53


No 38 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96  E-value=8.4e-29  Score=224.24  Aligned_cols=148  Identities=26%  Similarity=0.387  Sum_probs=131.7

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|+..+.||+|+||.||++... +++.||+|++....   ......+..|+.++..++||||+++++.+.+.+..++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47888999999999999999764 58899999987532   233456788999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            99999999998843   456899999999999999999999987   9999999999999999999999999998654


No 39 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.96  E-value=1.1e-28  Score=224.59  Aligned_cols=147  Identities=28%  Similarity=0.382  Sum_probs=130.4

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...+.||+|+||.||++.. .+++.||||.+...   .....+.+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4688899999999999999976 46889999988643   1233467889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||+++|+|..++.   ....+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        81 E~~~gg~L~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLI---KYDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            9999999999884   3456888899999999999999999987   999999999999999999999999999744


No 40 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.96  E-value=1.2e-28  Score=223.55  Aligned_cols=151  Identities=25%  Similarity=0.297  Sum_probs=132.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ...++|+..+.||+|+||.||++... +++.+|+|.+.+.   .......+.+|+.+++.++||||+++++++.+++..+
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            34578999999999999999999875 5789999988642   2223456789999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||+++|+|..++.    ...+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+
T Consensus       120 lv~Ey~~gg~L~~~l~----~~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         120 MVMEYMPGGDLVNLMS----NYDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence            9999999999999883    235788899999999999999999987   999999999999999999999999999887


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       193 ~~  194 (370)
T cd05621         193 DE  194 (370)
T ss_pred             cc
Confidence            54


No 41 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.96  E-value=1.3e-28  Score=220.43  Aligned_cols=149  Identities=24%  Similarity=0.397  Sum_probs=132.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|++.+.||+|+||.||+|... +++.||+|+++...   ......+..|+.++..++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            36888999999999999999875 58899999987532   233457889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|.+++.   ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+....
T Consensus        81 e~~~g~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          81 EYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            9999999999984   3446889999999999999999999987   99999999999999999999999999986543


No 42 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96  E-value=1e-28  Score=223.72  Aligned_cols=148  Identities=25%  Similarity=0.396  Sum_probs=132.1

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|+..+.||+|+||.||+++.. +++.||||++....   ......+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47888999999999999999874 58899999987531   233456788999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            99999999998843   346899999999999999999999987   9999999999999999999999999998764


No 43 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96  E-value=1.3e-28  Score=224.43  Aligned_cols=146  Identities=24%  Similarity=0.366  Sum_probs=129.9

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +|...+.||+|+||.||+|.. .+++.||+|++....   ......+..|+.++..++||||+++++++.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            578889999999999999976 457899999987532   2334578899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+++|+|.+++..   ...+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            9999999998843   346888889999999999999999987   999999999999999999999999998754


No 44 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96  E-value=1.8e-28  Score=219.09  Aligned_cols=150  Identities=24%  Similarity=0.350  Sum_probs=133.5

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      .++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            467899999999999999999874 5889999998653   223456788999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        97 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         97 LEFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             EcCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            999999999988843   346788899999999999999999987   99999999999999999999999999987754


No 45 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.96  E-value=2.7e-28  Score=217.52  Aligned_cols=141  Identities=27%  Similarity=0.331  Sum_probs=125.2

Q ss_pred             cccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          157 CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      +.||+|+||.||++.. .+++.||+|.++...   ......+..|+.++.+++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999976 468899999987532   233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|..++.   ....+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+..
T Consensus        81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571          81 ELFFHLS---RERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            9988884   3456899999999999999999999987   999999999999999999999999999854


No 46 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=3e-28  Score=212.31  Aligned_cols=155  Identities=26%  Similarity=0.367  Sum_probs=137.4

Q ss_pred             HhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ..++|++.+.||.|..+.||+|. .+.+..||||++.-.. ....+.+.+|+..|..++||||++++-.|..+..+|+||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            45789999999999999999996 4678999999997543 334688999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      .||.+||+.+.+...- ...+++..+..|.+++++||.|||+++   .||||||+.||||+++|.+||+|||.+.-+...
T Consensus       104 pfMa~GS~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYY-PDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             hhhcCCcHHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            9999999999885432 345899999999999999999999998   999999999999999999999999988666544


Q ss_pred             c
Q 021046          307 E  307 (318)
Q Consensus       307 ~  307 (318)
                      .
T Consensus       180 G  180 (516)
T KOG0582|consen  180 G  180 (516)
T ss_pred             C
Confidence            3


No 47 
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96  E-value=4.3e-29  Score=221.80  Aligned_cols=163  Identities=26%  Similarity=0.422  Sum_probs=141.7

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCe-eEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE-NILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv  225 (318)
                      .++|..++++|+|+||.++..+++ ++..+++|.+.-.  +....+...+|+.++++++|||||.+.+.|..++. .++|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            367889999999999999998764 4678999987643  34445578999999999999999999999999988 8999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+|++||+|.+.+...+ ...++++....++.|++.|+.|||+..   |+|||||+.||+++.++.+||+|||+||.++.
T Consensus        83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            99999999999986544 678999999999999999999999776   99999999999999999999999999999987


Q ss_pred             CccccccceeecC
Q 021046          306 DELQGNTKRIVGT  318 (318)
Q Consensus       306 ~~~~~~~~~~~Gt  318 (318)
                      +..  .....+||
T Consensus       159 ~~~--~a~tvvGT  169 (426)
T KOG0589|consen  159 EDS--LASTVVGT  169 (426)
T ss_pred             chh--hhheecCC
Confidence            652  34456776


No 48 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.96  E-value=1.1e-28  Score=216.77  Aligned_cols=149  Identities=27%  Similarity=0.361  Sum_probs=132.0

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|+..+.||+|+||.||++... +++.||+|.+....   ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888899999999999999874 68899999986432   233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|.+++.   ....+++.....++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        81 e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          81 EYVPGGELFSYLR---NSGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            9999999999884   3346888999999999999999999987   99999999999999999999999999987643


No 49 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96  E-value=3.2e-28  Score=221.46  Aligned_cols=147  Identities=24%  Similarity=0.369  Sum_probs=130.1

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|++.+.||+|+||.||+++. .+++.||||.+....   ......+.+|+.++..++||||+++++.+.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3688999999999999999986 458899999986432   233466889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||+++|+|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|..+
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            99999999998843   346788888999999999999999987   999999999999999999999999998644


No 50 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96  E-value=2.4e-28  Score=222.78  Aligned_cols=146  Identities=25%  Similarity=0.392  Sum_probs=129.4

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +|...++||+|+||.||+|.. .+++.||+|.+....   ......+.+|+.+++.++||||+++++.+.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            588899999999999999976 457899999987532   2334578899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+++|+|..++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            9999999988843   346788889999999999999999987   999999999999999999999999998643


No 51 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.96  E-value=4.4e-29  Score=213.12  Aligned_cols=150  Identities=30%  Similarity=0.458  Sum_probs=122.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----eeEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----ENILI  225 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv  225 (318)
                      .|...+++|.|+||.||+|... +++.||||+.-....    --.+|+.+|+.++|||||+|.-+|....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            4667789999999999999874 468999998865332    2246899999999999999998887543     23589


Q ss_pred             EEeccCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC-CCceEeecccceee
Q 021046          226 YEYMPNKSLDVFLFY-PKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD-MNPKISDFGMARIF  303 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~-~~~ki~DfGla~~~  303 (318)
                      |||||. +|...+.. ...+..++...+.-+..||.+||.|||+.+   |+||||||.|+|+|.+ |.+||+|||-|+.+
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999987 57666642 223456677777788999999999999977   9999999999999987 89999999999999


Q ss_pred             cCCccc
Q 021046          304 GGDELQ  309 (318)
Q Consensus       304 ~~~~~~  309 (318)
                      ..++..
T Consensus       177 ~~~epn  182 (364)
T KOG0658|consen  177 VKGEPN  182 (364)
T ss_pred             ccCCCc
Confidence            877654


No 52 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95  E-value=5.6e-28  Score=226.16  Aligned_cols=152  Identities=19%  Similarity=0.219  Sum_probs=132.2

Q ss_pred             CCccccccccCCcccEEEEEec-C-CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-N-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .|...+.||+|+||.||+|... + +..||+|.+..........+..|+.+++.++||||+++++++..++..++||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            4888899999999999999753 3 5778888775544444556788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          230 PNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       230 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ++|+|.+++... .....+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence            999999887532 23456889999999999999999999987   999999999999999999999999999987644


No 53 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95  E-value=7.2e-28  Score=210.97  Aligned_cols=149  Identities=28%  Similarity=0.352  Sum_probs=130.3

Q ss_pred             CccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      |...+.||+|+||.||++.. .+++.||+|.+....   ......+.+|+.++..++|+|++++++++.+++..++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            67788999999999999976 568999999886432   22334678999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|+|..++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        82 ~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          82 MNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             cCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence            9999998777432 2346889999999999999999999987   99999999999999999999999999987643


No 54 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95  E-value=3.4e-28  Score=221.10  Aligned_cols=154  Identities=31%  Similarity=0.416  Sum_probs=132.1

Q ss_pred             HhcCCccccccccCCcccEEEEEe------cCCcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecC
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQG  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~  220 (318)
                      ..++|+..+.||+|+||.||+|++      .++..||||+++... ....+.+.+|+.++..+ +||||++++++|..++
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            356789999999999999999964      235689999987532 23445788999999999 8999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCC----------------------------------------------------------
Q 021046          221 ENILIYEYMPNKSLDVFLFYPK----------------------------------------------------------  242 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------  242 (318)
                      ..++||||+++|+|..++....                                                          
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            9999999999999998885321                                                          


Q ss_pred             --------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          243 --------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       243 --------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                                    ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccC
Confidence                          0125788999999999999999999987   99999999999999999999999999987654


No 55 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95  E-value=5.5e-28  Score=215.91  Aligned_cols=141  Identities=28%  Similarity=0.338  Sum_probs=125.4

Q ss_pred             cccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          157 CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      +.||+|+||.||++.. .+++.||+|.+...   .......+.+|+.+++.++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999976 46889999998753   2234567889999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|..++.   ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593          81 ELFFHLS---RERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             CHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            9988874   3356889999999999999999999987   999999999999999999999999999864


No 56 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.95  E-value=3.4e-28  Score=220.66  Aligned_cols=151  Identities=25%  Similarity=0.299  Sum_probs=132.3

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..++|+..+.||+|+||.||++... +++.||+|.+...   .......+..|+.+++.++||||+++++++.+++..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            4568999999999999999999864 5889999998642   22334457889999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||+++|+|..++..    ..+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999998832    34788888899999999999999987   9999999999999999999999999998775


Q ss_pred             CC
Q 021046          305 GD  306 (318)
Q Consensus       305 ~~  306 (318)
                      .+
T Consensus       194 ~~  195 (370)
T cd05596         194 AN  195 (370)
T ss_pred             CC
Confidence            43


No 57 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95  E-value=4.4e-28  Score=219.94  Aligned_cols=153  Identities=24%  Similarity=0.289  Sum_probs=133.5

Q ss_pred             HHHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCee
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  222 (318)
                      ....++|...+.||+|+||.||++... +++.+|+|.+...   .......+.+|+.+++.++||||+++++++.+++..
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL  118 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence            345689999999999999999999875 5788999988642   122344578899999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||+++|+|..++.    ...+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+|+.
T Consensus       119 ~lv~Ey~~gg~L~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~  191 (371)
T cd05622         119 YMVMEYMPGGDLVNLMS----NYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (371)
T ss_pred             EEEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence            99999999999999883    234788888999999999999999987   99999999999999999999999999987


Q ss_pred             ecCC
Q 021046          303 FGGD  306 (318)
Q Consensus       303 ~~~~  306 (318)
                      +...
T Consensus       192 ~~~~  195 (371)
T cd05622         192 MNKE  195 (371)
T ss_pred             cCcC
Confidence            7543


No 58 
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.95  E-value=1.3e-28  Score=225.53  Aligned_cols=160  Identities=32%  Similarity=0.478  Sum_probs=138.5

Q ss_pred             CccccccccCCcccEEEEEe-cCCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecC------eeEE
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG------ENIL  224 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~l  224 (318)
                      |...+.||+|+||.||+|+. .+|+.||||.++... ....+..-+|+++|++++|||||++.+.-.+..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            45567899999999999985 579999999998643 345667889999999999999999999866544      5689


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE--cCCCC--ceEeecccc
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL--DSDMN--PKISDFGMA  300 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill--~~~~~--~ki~DfGla  300 (318)
                      |||||++|||...|..++....|++.+.+.+..+++.||.|||+++   |+||||||.||++  ..+|+  -||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            9999999999999988888889999999999999999999999887   9999999999998  33343  799999999


Q ss_pred             eeecCCccccccceeecC
Q 021046          301 RIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       301 ~~~~~~~~~~~~~~~~Gt  318 (318)
                      |-+.++.   ....++||
T Consensus       172 rel~d~s---~~~S~vGT  186 (732)
T KOG4250|consen  172 RELDDNS---LFTSLVGT  186 (732)
T ss_pred             ccCCCCC---eeeeecCc
Confidence            9997766   46678887


No 59 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95  E-value=4.9e-28  Score=215.77  Aligned_cols=141  Identities=26%  Similarity=0.334  Sum_probs=125.0

Q ss_pred             cccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          157 CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      +.||+|+||.||++.. .+|..||+|.+...   .......+..|+.++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3699999999999986 46889999998753   2233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|..++.   ....+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595          81 ELFFHLS---RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            9988773   3346889999999999999999999987   999999999999999999999999999764


No 60 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95  E-value=6.7e-28  Score=213.92  Aligned_cols=140  Identities=24%  Similarity=0.296  Sum_probs=124.7

Q ss_pred             cccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||+|+||.||++... +++.||+|.+...   .......+..|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999874 5789999998643   233456788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      .+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~  144 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNM  144 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCc
Confidence            988843   346889999999999999999999987   9999999999999999999999999998653


No 61 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=1.6e-28  Score=223.03  Aligned_cols=152  Identities=29%  Similarity=0.451  Sum_probs=136.0

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ..-|.+++.||.|+.|.|-.|++ .+|+.+|||.+.+..   ......+.+|+.+|+-+.|||+++++++|.+..++|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            34578889999999999999975 679999999998652   23345688999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      .||+++|.|.+++.   ....+++.++.+++.||+.|+.|+|..+   |+||||||+|+|+|..+.+||+|||||.+-.+
T Consensus        91 lEyv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~  164 (786)
T KOG0588|consen   91 LEYVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP  164 (786)
T ss_pred             EEecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC
Confidence            99999999999984   4567888999999999999999999887   99999999999999999999999999998766


Q ss_pred             Cc
Q 021046          306 DE  307 (318)
Q Consensus       306 ~~  307 (318)
                      +.
T Consensus       165 gk  166 (786)
T KOG0588|consen  165 GK  166 (786)
T ss_pred             Cc
Confidence            53


No 62 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95  E-value=9.9e-28  Score=214.56  Aligned_cols=150  Identities=22%  Similarity=0.305  Sum_probs=132.1

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|++.+.||+|+||.||++... +++.||+|.+.+.   .......+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46888999999999999999864 5889999998642   2233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|..++..  ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             ecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            99999999998843  2346888999999999999999999987   99999999999999999999999999987654


No 63 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.95  E-value=6.1e-28  Score=215.83  Aligned_cols=151  Identities=22%  Similarity=0.321  Sum_probs=133.3

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...+.||+|+||.||++... +++.||+|.++...   ......+..|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            46888999999999999999764 68899999987532   234456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+..+
T Consensus        81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            999999999988432  346899999999999999999999987   999999999999999999999999999877544


No 64 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95  E-value=1.4e-27  Score=212.97  Aligned_cols=142  Identities=26%  Similarity=0.313  Sum_probs=124.7

Q ss_pred             cccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          157 CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      +.||+|+||.||++.. .+++.||+|.+...   .......+..|+.++..++||||+++++++..++..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999976 46889999998753   2233456788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|..++.   ....+++..+..++.|++.||.|||+ .+   |+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~  147 (325)
T cd05594          81 ELFFHLS---RERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  147 (325)
T ss_pred             cHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence            9988873   34568999999999999999999997 55   9999999999999999999999999998643


No 65 
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95  E-value=1.1e-27  Score=214.24  Aligned_cols=151  Identities=21%  Similarity=0.285  Sum_probs=132.2

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|.+.+.||+|+||.||+++.. +++.||+|.+.+.   .......+..|..++..++|+||+++++++.+++..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47888999999999999999874 5788999988642   1223445788999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+++|+|..++...  ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+..+
T Consensus        81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            999999999998532  346888999999999999999999987   999999999999999999999999999877544


No 66 
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.95  E-value=1.3e-27  Score=218.41  Aligned_cols=155  Identities=28%  Similarity=0.397  Sum_probs=132.1

Q ss_pred             HHhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccC-CCccceEEEEEEec
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQ  219 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~  219 (318)
                      ...++|.+.+.||+|+||.||+|+..      .+..||||++..... ...+.+.+|+.++.++. ||||++++++|...
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            34678899999999999999999752      134699999975432 33467899999999996 99999999999999


Q ss_pred             CeeEEEEEeccCCChhhhhhcCC---------------------------------------------------------
Q 021046          220 GENILIYEYMPNKSLDVFLFYPK---------------------------------------------------------  242 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------  242 (318)
                      +..++||||+++|+|.+++....                                                         
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            99999999999999998875321                                                         


Q ss_pred             ------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE
Q 021046          243 ------------------------------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL  286 (318)
Q Consensus       243 ------------------------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill  286 (318)
                                                          ....+++..+..++.|++.||.|||+.+   |+||||||+|||+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill  270 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLL  270 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEE
Confidence                                                0134788889999999999999999987   9999999999999


Q ss_pred             cCCCCceEeecccceeecC
Q 021046          287 DSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       287 ~~~~~~ki~DfGla~~~~~  305 (318)
                      +.++.+||+|||+++.+..
T Consensus       271 ~~~~~~kL~DfGla~~~~~  289 (400)
T cd05105         271 AQGKIVKICDFGLARDIMH  289 (400)
T ss_pred             eCCCEEEEEeCCcceeccc
Confidence            9999999999999987644


No 67 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.95  E-value=5.8e-28  Score=217.61  Aligned_cols=150  Identities=27%  Similarity=0.437  Sum_probs=133.8

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|.+.+.||+|+||.||++... +++.||||++....   ......+..|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46888999999999999999875 68899999987532   234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+++|+|..++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            99999999998843   256889999999999999999999987   999999999999999999999999999877544


No 68 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95  E-value=1.3e-27  Score=213.91  Aligned_cols=148  Identities=26%  Similarity=0.357  Sum_probs=129.2

Q ss_pred             CCccccccccCCcccEEEEEe----cCCcEEEEEEccCC----CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCee
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQ----SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~l~~~----~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~  222 (318)
                      +|++.+.||+|+||.||+++.    .+++.||+|.+.+.    .....+.+..|+.++..+ +||||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478889999999999999975    35789999998642    123345678899999999 599999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||+++|+|..++..   ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            999999999999988843   356889999999999999999999987   99999999999999999999999999986


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      +..
T Consensus       155 ~~~  157 (332)
T cd05614         155 FLS  157 (332)
T ss_pred             ccc
Confidence            543


No 69 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.95  E-value=1.4e-27  Score=214.21  Aligned_cols=161  Identities=29%  Similarity=0.427  Sum_probs=140.2

Q ss_pred             HHhcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCc---CHHHHHHHHHHHhccC-CCccceEEEEEEecCee
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ---GLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~  222 (318)
                      .....|++.+.||+|.||.||++..+. |+.+|+|.+.+....   ....+.+|+.+|.++. |||||++.+.+.+.+..
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            345678888999999999999998755 999999999865443   3468999999999998 99999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC----CCceEeecc
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD----MNPKISDFG  298 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~----~~~ki~DfG  298 (318)
                      ++|||++.+|.|.+.+...    .+++.++..++.|++.++.|||+.+   ++||||||+|+|+...    +.+|++|||
T Consensus       112 ~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             EEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            9999999999999888544    3899999999999999999999987   9999999999999654    479999999


Q ss_pred             cceeecCCccccccceeecC
Q 021046          299 MARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       299 la~~~~~~~~~~~~~~~~Gt  318 (318)
                      +|+.....   .....++||
T Consensus       185 la~~~~~~---~~~~~~~Gt  201 (382)
T KOG0032|consen  185 LAKFIKPG---ERLHTIVGT  201 (382)
T ss_pred             CceEccCC---ceEeeecCC
Confidence            99998762   245567776


No 70 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95  E-value=7.9e-28  Score=218.55  Aligned_cols=155  Identities=32%  Similarity=0.461  Sum_probs=131.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhcc-CCCccceEEEEEEec
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ  219 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~  219 (318)
                      ...++|+..+.||+|+||.||++...      ++..||+|+++.... .....+.+|+.+++.+ +||||++++++|...
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            34568999999999999999998742      245799999975432 2345688999999999 899999999999999


Q ss_pred             CeeEEEEEeccCCChhhhhhcCC---------------------------------------------------------
Q 021046          220 GENILIYEYMPNKSLDVFLFYPK---------------------------------------------------------  242 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------  242 (318)
                      +..++||||+++|+|.+++....                                                         
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            99999999999999998875321                                                         


Q ss_pred             ----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          243 ----------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       243 ----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                                ....+++.....++.||+.||.|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence                      1134788899999999999999999987   99999999999999999999999999987643


No 71 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95  E-value=1.2e-27  Score=216.43  Aligned_cols=148  Identities=26%  Similarity=0.412  Sum_probs=131.5

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|+..+.||+|+||.||++... +++.||+|.+...   .......+..|+.++..++||||+++++.+.+++..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46888899999999999999864 5889999998643   2334567888999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++|+|.+++.   ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 E~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLM---KKDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            9999999999884   3456889999999999999999999987   9999999999999999999999999998654


No 72 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.95  E-value=1.6e-27  Score=212.50  Aligned_cols=141  Identities=30%  Similarity=0.426  Sum_probs=123.8

Q ss_pred             cccccCCcccEEEEEe----cCCcEEEEEEccCC----CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQ----SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~----~~~~~vavK~l~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +.||+|+||.||+++.    .+++.||+|.++..    .......+..|+.++..++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999975    35788999998753    122345678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++|+|.+++.   ....+.+..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        82 ~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584          82 LSGGELFMHLE---REGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             CCCchHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            99999988884   3346788888899999999999999987   999999999999999999999999999754


No 73 
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95  E-value=1e-28  Score=222.78  Aligned_cols=159  Identities=28%  Similarity=0.461  Sum_probs=140.1

Q ss_pred             HHHHhcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          146 VSAATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       146 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ++....+....++||-|.||.||.|.|+. ...||||.++. +....++|+.|+.+|+.++|||+|+|+|+|+.....|+
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYI  340 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYI  340 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEE
Confidence            33444556667899999999999998854 56899999976 45677899999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+|||..|+|.+||.... ...++.-..++++.||+.||+||..+.   +|||||.++|+|+.++..+||+||||++++.
T Consensus       341 iTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMt  416 (1157)
T KOG4278|consen  341 ITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMT  416 (1157)
T ss_pred             EEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhc
Confidence            999999999999996542 345667788999999999999999887   9999999999999999999999999999999


Q ss_pred             CCccc
Q 021046          305 GDELQ  309 (318)
Q Consensus       305 ~~~~~  309 (318)
                      +|...
T Consensus       417 gDTYT  421 (1157)
T KOG4278|consen  417 GDTYT  421 (1157)
T ss_pred             CCcee
Confidence            88654


No 74 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95  E-value=2e-27  Score=208.45  Aligned_cols=149  Identities=29%  Similarity=0.448  Sum_probs=129.5

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|...+.||+|+||.||+|... ++..||+|.++... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            357888999999999999999764 67899999887532 2334567899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++ +|..++..  ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        84 ~~~~-~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          84 YLDS-DLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             CCCc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            9985 88887742  2345788999999999999999999987   9999999999999999999999999998654


No 75 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95  E-value=2.2e-27  Score=205.76  Aligned_cols=149  Identities=28%  Similarity=0.434  Sum_probs=130.8

Q ss_pred             hcCCccccccccCCcccEEEEEec----CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      .++|++.+.||+|+||.||+|.+.    .+..||+|.++.... .....+.+|+..+..++||||+++++++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356888899999999999999753    356899999876432 334578999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||||+++|+|.+++...  ...+++..++.++.|++.||+|||+++   ++||||||+||+++.++.+|++|||++...
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            99999999999988532  346889999999999999999999887   999999999999999999999999987654


No 76 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95  E-value=2e-27  Score=211.41  Aligned_cols=144  Identities=30%  Similarity=0.368  Sum_probs=126.3

Q ss_pred             cccccCCcccEEEEEe----cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          157 CKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~----~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      +.||+|+||.||+++.    .+++.+|+|++....  ......+..|+.++.+++||||+++++++..++..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999865    357899999987532  2234567789999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +|+|.+++.   ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.....
T Consensus        82 ~~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  151 (318)
T cd05582          82 GGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  151 (318)
T ss_pred             CCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence            999998883   3456899999999999999999999987   999999999999999999999999999876443


No 77 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95  E-value=1.8e-27  Score=214.75  Aligned_cols=146  Identities=28%  Similarity=0.429  Sum_probs=127.1

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|+..++||+|+||.||++... +++.||||.+..... .....+.+|+.+++.++|+||+++++++...+..++|||
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  152 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE  152 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence            356777889999999999999864 688999999865322 234678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++|+|....       ..++.....++.||+.||.|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence            99999985432       3456778889999999999999987   99999999999999999999999999987653


No 78 
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95  E-value=5.8e-28  Score=226.49  Aligned_cols=152  Identities=29%  Similarity=0.444  Sum_probs=132.7

Q ss_pred             HHhcCCccccccccCCcccEEEEEecCC-cEEEEEEccCCCCcCHHHHHHHHHHHhccC-CCccceEEEEEE-e------
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLNG-QEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCI-E------  218 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~-~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-~------  218 (318)
                      ....++++.+.|.+|||+.||.|....+ ..+|+|++-..++...+...+|+.+|+.|+ |||||.+++... .      
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            3455778889999999999999998665 999999988777788889999999999998 999999999432 1      


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      .-+.+|+||||.+|.|-+++...... .|++.++++|+.++++|+++||.. ++||||||||-+||||+.++..||||||
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG  191 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG  191 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence            13578999999999999998644333 399999999999999999999997 5789999999999999999999999999


Q ss_pred             cce
Q 021046          299 MAR  301 (318)
Q Consensus       299 la~  301 (318)
                      -|.
T Consensus       192 Sat  194 (738)
T KOG1989|consen  192 SAT  194 (738)
T ss_pred             ccc
Confidence            884


No 79 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95  E-value=3.6e-27  Score=210.92  Aligned_cols=151  Identities=26%  Similarity=0.342  Sum_probs=132.8

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|+.++..++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            468999999999999999999874 57889999887542 2334578999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++|+|.+++..   ...+++..+..++.|++.||.|||+.+  +|+||||||+||+++.++.+||+|||+++.+..
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  156 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence            9999999998843   346889999999999999999999853  499999999999999999999999999986643


No 80 
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95  E-value=3e-27  Score=211.54  Aligned_cols=150  Identities=21%  Similarity=0.280  Sum_probs=130.8

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...++||+|+||.||++... +++.+|+|.+.+.   .......+..|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            46888999999999999999875 4678999988642   2223445888999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            999999999998532  346889999999999999999999987   99999999999999999999999999976643


No 81 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95  E-value=3.2e-27  Score=211.40  Aligned_cols=150  Identities=27%  Similarity=0.355  Sum_probs=131.8

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|+..++||+|+||.||++... ++..+|+|.+.... ......+.+|+.++..++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            478999999999999999999875 57889999876532 2334578999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++|+|.+++..   ...+++.....++.|++.||.|||+.+  +++||||||+|||+++++.+||+|||++..+.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            9999999998843   345888999999999999999999743  39999999999999999999999999997654


No 82 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=3.3e-27  Score=215.38  Aligned_cols=142  Identities=23%  Similarity=0.289  Sum_probs=125.7

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..+|.+.+.||+|+||.||++.. .+++.||+|....      ..+.+|+.++++++||||+++++++..++..++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            46799999999999999999976 4688999997542      3568899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +. ++|..++.   ....+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+|+...
T Consensus       165 ~~-~~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~  233 (391)
T PHA03212        165 YK-TDLYCYLA---AKRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPV  233 (391)
T ss_pred             CC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence            85 67877773   2346889999999999999999999987   9999999999999999999999999997643


No 83 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95  E-value=2.7e-27  Score=210.36  Aligned_cols=151  Identities=34%  Similarity=0.576  Sum_probs=129.6

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCc----EEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ..+|+..+.||+|+||.||+|.+. ++.    .||+|.++... ....+++..|+.+++.++||||++++|+|... ..+
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~   84 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ   84 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence            356899999999999999999763 333    48999987543 23456789999999999999999999999864 578


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++||+++|+|.+++...  ...+++...+.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+
T Consensus        85 ~v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          85 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             eeeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccc
Confidence            999999999999988532  345888999999999999999999987   999999999999999999999999999987


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ..+
T Consensus       160 ~~~  162 (316)
T cd05108         160 GAD  162 (316)
T ss_pred             cCC
Confidence            643


No 84 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.95  E-value=2.9e-27  Score=207.16  Aligned_cols=149  Identities=23%  Similarity=0.389  Sum_probs=130.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|++.+.||+|+||.||+++.. +++.||+|++....  ......+.+|+.++..++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            36888999999999999999875 57889999987532  2335678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |++++++..+..   ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+|+.+..
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            999987765542   2346889999999999999999999887   99999999999999999999999999987653


No 85 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.95  E-value=3.6e-27  Score=210.77  Aligned_cols=141  Identities=27%  Similarity=0.389  Sum_probs=123.3

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++... +++.+|+|.+++.   .......+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999864 5789999998753   223345677888888776 799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++..
T Consensus        81 ~~L~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618          81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            99988773   3356899999999999999999999987   999999999999999999999999999754


No 86 
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.95  E-value=1.4e-27  Score=206.47  Aligned_cols=151  Identities=26%  Similarity=0.335  Sum_probs=134.8

Q ss_pred             HhcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..++|+..+.||+|.-|+||++++.+ +..+|+|++.+..   .....+...|-++|+.++||.++.|+..+..++..++
T Consensus        75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl  154 (459)
T KOG0610|consen   75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL  154 (459)
T ss_pred             CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence            34678888999999999999999865 5889999998753   3345567889999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||+||+|...++. +..+.+++..+..++..++.||+|||-.|   ||.|||||+||||-++|++.|+||.|+...
T Consensus       155 ~meyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  155 VMEYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             EEecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccC
Confidence            9999999999987754 35678999999999999999999999888   999999999999999999999999999765


No 87 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95  E-value=5e-27  Score=205.28  Aligned_cols=152  Identities=34%  Similarity=0.520  Sum_probs=131.2

Q ss_pred             cCCccccccccCCcccEEEEEe-----cCCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ++|+..+.||+|+||.||+|..     .++..+++|.+..... ....++.+|+.+++.++||||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            5678889999999999999974     2457899999875332 334678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC
Q 021046          225 IYEYMPNKSLDVFLFYPKK--------------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM  290 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~  290 (318)
                      ||||+++++|.+++.....              ...+++.....++.|++.||+|||+++   ++||||||+||++++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence            9999999999998853211              235788999999999999999999987   99999999999999999


Q ss_pred             CceEeecccceeecC
Q 021046          291 NPKISDFGMARIFGG  305 (318)
Q Consensus       291 ~~ki~DfGla~~~~~  305 (318)
                      .+||+|||+++....
T Consensus       162 ~~kl~dfg~~~~~~~  176 (283)
T cd05090         162 HVKISDLGLSREIYS  176 (283)
T ss_pred             cEEeccccccccccC
Confidence            999999999986643


No 88 
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95  E-value=5.4e-29  Score=230.53  Aligned_cols=151  Identities=34%  Similarity=0.541  Sum_probs=132.4

Q ss_pred             CccccccccCCcccEEEEEe-cCCc----EEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-LNGQ----EVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-~~~~----~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ....++||+|+||+||+|.+ +.|+    +||||.+... ..+...+++.|+..|++|+|||+++|+|+|.... ..||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            34557899999999999965 4444    6899988754 3345678999999999999999999999999876 88999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +||+.|+|.+|++..  ...+..+..+.|..|||+||.|||.+.   +|||||.++||||.+...+||+|||+|+++..|
T Consensus       777 q~mP~G~LlDyvr~h--r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREH--RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             HhcccchHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence            999999999999653  456788999999999999999999887   999999999999999999999999999999887


Q ss_pred             ccc
Q 021046          307 ELQ  309 (318)
Q Consensus       307 ~~~  309 (318)
                      +.+
T Consensus       852 ~~e  854 (1177)
T KOG1025|consen  852 EKE  854 (1177)
T ss_pred             ccc
Confidence            654


No 89 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95  E-value=4.5e-27  Score=207.73  Aligned_cols=149  Identities=30%  Similarity=0.433  Sum_probs=129.2

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|...+.||+|+||.||+|... +++.||||.+..... .....+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999875 688999999875432 233467889999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |++ ++|.+++..  ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+...
T Consensus        84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869          84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKS  154 (303)
T ss_pred             CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence            996 577666632  2345788899999999999999999987   9999999999999999999999999998654


No 90 
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.95  E-value=5.5e-27  Score=201.98  Aligned_cols=148  Identities=32%  Similarity=0.485  Sum_probs=132.5

Q ss_pred             cCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      ++|+..+.||+|+||.||++.+.++..+|+|.+... .....++..|+.++++++||||+++++++..++..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            468888999999999999999888889999988643 3345688999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|+|.+++...  ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+++...
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~  151 (256)
T cd05114          83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVL  151 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccC
Confidence            99999988532  235889999999999999999999987   9999999999999999999999999998654


No 91 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95  E-value=4.1e-27  Score=209.97  Aligned_cols=146  Identities=27%  Similarity=0.363  Sum_probs=126.8

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCC-ccceEEEEEEecCeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHR-HLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~  226 (318)
                      +|...+.||+|+||.||+|... +++.||+|.+...   .....+.+..|..++..++|+ +|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4778899999999999999864 4778999998753   233456788899999999765 5888999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||+++|+|..++.   ....+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          81 EYVNGGDLMYHIQ---QVGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            9999999988884   3346889999999999999999999987   999999999999999999999999999753


No 92 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95  E-value=4e-27  Score=209.78  Aligned_cols=141  Identities=27%  Similarity=0.391  Sum_probs=123.3

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|+.. +++.||+|.+...   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 4789999998753   223445677888888765 799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++..
T Consensus        81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591          81 GDLMFQIQ---RSRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceec
Confidence            99988874   3356889999999999999999999987   999999999999999999999999999864


No 93 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.95  E-value=3.7e-27  Score=210.66  Aligned_cols=140  Identities=24%  Similarity=0.381  Sum_probs=123.8

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++... +++.||+|.++..   .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36899999999999864 5789999999753   223345678899999888 799999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      |+|..++.   ....+++..+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++.
T Consensus        81 g~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588          81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccc
Confidence            99988773   3356899999999999999999999987   99999999999999999999999999975


No 94 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.95  E-value=3.4e-27  Score=210.49  Aligned_cols=144  Identities=28%  Similarity=0.441  Sum_probs=124.1

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHH---hccCCCccceEEEEEEecCeeEEE
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLI---AKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      |.+.+.||+|+||.||++... +++.||||.++...   ....+.+..|+.++   ..++||||+++++++..++..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            566789999999999999764 58899999987532   23345566676554   567899999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |||+++|+|..++.    ...+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++..
T Consensus        81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            99999999988773    346899999999999999999999987   999999999999999999999999998754


No 95 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95  E-value=4.3e-27  Score=209.08  Aligned_cols=142  Identities=29%  Similarity=0.356  Sum_probs=121.3

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhc-cCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAK-LQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|... +++.||+|.++...   ....+.+..|..++.. .+||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999874 57889999987532   2334455667666664 4899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+|..++..   ...+++.....++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+|+...
T Consensus        81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~  147 (316)
T cd05592          81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENM  147 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence            999888742   346888999999999999999999987   9999999999999999999999999998653


No 96 
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95  E-value=7.6e-27  Score=201.68  Aligned_cols=152  Identities=31%  Similarity=0.472  Sum_probs=135.9

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..++|...+.||+|+||.||+|...+++.||+|.++... ...+++.+|+.++++++|||++++++++...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            346788889999999999999998778899999987533 3457799999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++.... ...+++.....++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.+..
T Consensus        83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05068          83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKE  155 (261)
T ss_pred             ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence            99999999885432 356899999999999999999999987   99999999999999999999999999987753


No 97 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=1e-27  Score=204.38  Aligned_cols=150  Identities=29%  Similarity=0.473  Sum_probs=130.1

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEe-----cCe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE-----QGE  221 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~  221 (318)
                      ...|...+.||+|+||.|..+.. .+|+.||||++.+.  .....++-.+|+.+|+.++|+||+.+.+.+..     -+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            45566678999999999999976 56899999999743  34456788999999999999999999999876     357


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      .|+|+|+| ..+|...+   +.+..++..-...+..|+++||+|+|+.+   ++||||||+|+|++.+..+||+|||||+
T Consensus       101 vYiV~elM-etDL~~ii---k~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQII---KSQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             eEEehhHH-hhHHHHHH---HcCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence            89999999 66888888   34455888889999999999999999988   9999999999999999999999999999


Q ss_pred             eecCC
Q 021046          302 IFGGD  306 (318)
Q Consensus       302 ~~~~~  306 (318)
                      .+...
T Consensus       174 ~~~~~  178 (359)
T KOG0660|consen  174 YLDKF  178 (359)
T ss_pred             ecccc
Confidence            98653


No 98 
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.95  E-value=8.2e-27  Score=201.06  Aligned_cols=150  Identities=31%  Similarity=0.496  Sum_probs=133.3

Q ss_pred             cCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      ++|...+.||+|+||.||+|...++..+|+|.+... ....+++.+|+.++.+++||||+++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            467888899999999999998877778999988753 3345779999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +|+|.+++...  ...+++..++.++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++....+
T Consensus        83 ~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05113          83 NGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD  153 (256)
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence            99999988532  236899999999999999999999987   999999999999999999999999999876443


No 99 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95  E-value=6.6e-27  Score=204.35  Aligned_cols=144  Identities=31%  Similarity=0.401  Sum_probs=125.7

Q ss_pred             cccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||+|+||.||++... +++.+|+|.+....   ....+.+..|+.+++.++||||+++.+++..++..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999764 68899999986532   22345678899999999999999999999999999999999999999


Q ss_pred             hhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          235 DVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       235 ~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ..++... .....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence            8877432 23457899999999999999999999987   99999999999999999999999999987654


No 100
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95  E-value=5.8e-27  Score=208.91  Aligned_cols=147  Identities=28%  Similarity=0.348  Sum_probs=126.4

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      +|...+.||+|+||.||+|... +++.||+|.+.+..   ......+..|..++..+ +||+|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999865 57799999987532   22334567777777776 5899999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++|+|..++.   ....+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        81 E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          81 EYVNGGDLMYQIQ---QVGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             cCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            9999999988874   2346889999999999999999999987   9999999999999999999999999998643


No 101
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95  E-value=6e-28  Score=187.32  Aligned_cols=148  Identities=28%  Similarity=0.465  Sum_probs=128.0

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|...++||+|.||+||+|+. .+++.||+|+++-.  ++.......+|+.+++.++|.|||+++++...++..-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            566778999999999999975 45788999988643  223345788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +.. +|..|..  .-+..++.+....++.|+++||.|+|++.   +.|||+||.|.||+.+|++|++|||+|+-++-
T Consensus        83 cdq-dlkkyfd--slng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   83 CDQ-DLKKYFD--SLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             hhH-HHHHHHH--hcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            954 6766652  34567888999999999999999999987   99999999999999999999999999998753


No 102
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.95  E-value=4.2e-27  Score=203.19  Aligned_cols=153  Identities=35%  Similarity=0.561  Sum_probs=138.5

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ...+|...++||+|+||.||+|...++..+++|.+..........+..|+.+++.++||||+++++++...+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            44678889999999999999999888899999999876555667899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|+|.+++... ....+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||++..+..
T Consensus        84 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~  156 (261)
T cd05148          84 MEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKE  156 (261)
T ss_pred             cccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCC
Confidence            9999999998543 3456899999999999999999999987   99999999999999999999999999987654


No 103
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95  E-value=6.5e-27  Score=213.75  Aligned_cols=155  Identities=29%  Similarity=0.431  Sum_probs=131.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccC-CCccceEEEEEEec
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQ  219 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~  219 (318)
                      ...++|.+.+.||+|+||.||+|.+.      .+..||+|+++.... ...+.+..|+.++.++. ||||++++++|...
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~  113 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG  113 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence            34567888899999999999999853      345899999975432 22457889999999997 99999999999999


Q ss_pred             CeeEEEEEeccCCChhhhhhcCC---------------------------------------------------------
Q 021046          220 GENILIYEYMPNKSLDVFLFYPK---------------------------------------------------------  242 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------  242 (318)
                      +..++||||+++|+|.++++...                                                         
T Consensus       114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (401)
T cd05107         114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ  193 (401)
T ss_pred             CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence            99999999999999999886421                                                         


Q ss_pred             --------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 021046          243 --------------------------------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNI  284 (318)
Q Consensus       243 --------------------------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Ni  284 (318)
                                                            ....+++.....++.|++.||+|||+.+   ++||||||+||
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~Ni  270 (401)
T cd05107         194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNV  270 (401)
T ss_pred             cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceE
Confidence                                                  1124677888999999999999999876   99999999999


Q ss_pred             EEcCCCCceEeecccceeecC
Q 021046          285 LLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       285 ll~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++++.+||+|||+++.+..
T Consensus       271 Ll~~~~~~kL~DfGla~~~~~  291 (401)
T cd05107         271 LICEGKLVKICDFGLARDIMR  291 (401)
T ss_pred             EEeCCCEEEEEecCcceeccc
Confidence            999999999999999987643


No 104
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.95  E-value=8e-27  Score=204.05  Aligned_cols=150  Identities=31%  Similarity=0.540  Sum_probs=131.3

Q ss_pred             cCCccccccccCCcccEEEEEe-----cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENI  223 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~  223 (318)
                      .+|+..+.||+|+||.||++..     .++..||+|.+........+.+.+|+.++..++||||+++++++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4678889999999999999974     35789999998766555567899999999999999999999987643  4678


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||+++|+|.+++...  ...+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            999999999999988432  345899999999999999999999987   999999999999999999999999999876


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       159 ~~  160 (284)
T cd05081         159 PQ  160 (284)
T ss_pred             cC
Confidence            54


No 105
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.95  E-value=5.7e-27  Score=210.05  Aligned_cols=146  Identities=26%  Similarity=0.421  Sum_probs=125.5

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----eeE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----ENI  223 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~  223 (318)
                      +|++.+.||+|+||.||+|... +++.||||++...  .......+.+|+.+++.++||||+++++++...+     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4778899999999999999864 6889999998743  2233457889999999999999999999986543     479


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||++ ++|..++.   ....+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999995 68887773   3446899999999999999999999987   999999999999999999999999999865


Q ss_pred             c
Q 021046          304 G  304 (318)
Q Consensus       304 ~  304 (318)
                      .
T Consensus       154 ~  154 (338)
T cd07859         154 F  154 (338)
T ss_pred             c
Confidence            4


No 106
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.95  E-value=4e-27  Score=220.79  Aligned_cols=156  Identities=21%  Similarity=0.281  Sum_probs=132.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC----
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG----  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----  220 (318)
                      ...++|.+.+.||+|+||.||++.. .+++.||||.+...  .......+.+|+..+..++|+|+++++..+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3457899999999999999999975 56899999998653  2334456889999999999999999988776433    


Q ss_pred             ----eeEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEe
Q 021046          221 ----ENILIYEYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       221 ----~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                          ..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence                357999999999999988542 23457899999999999999999999987   9999999999999999999999


Q ss_pred             ecccceeecCC
Q 021046          296 DFGMARIFGGD  306 (318)
Q Consensus       296 DfGla~~~~~~  306 (318)
                      |||+++.+...
T Consensus       186 DFGls~~~~~~  196 (496)
T PTZ00283        186 DFGFSKMYAAT  196 (496)
T ss_pred             ecccCeecccc
Confidence            99999887543


No 107
>PHA02988 hypothetical protein; Provisional
Probab=99.95  E-value=8.9e-27  Score=203.88  Aligned_cols=143  Identities=20%  Similarity=0.358  Sum_probs=125.0

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCcC---HHHHHHHHHHHhccCCCccceEEEEEEe----cCeeEEEEEec
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG---LTEFKNEMMLIAKLQHRHLVRLFGCCIE----QGENILIYEYM  229 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~  229 (318)
                      ..||+|+++.||+|.+ +|+.||||.++......   .+.|.+|+.++.+++||||++++|++.+    ....++||||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            5799999999999998 68899999997643333   4678899999999999999999999987    34679999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++|+|.+++..   ...+++.....++.|++.||.|||+..  +++||||||+||++++++.+||+|||+++.+..
T Consensus       105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~  175 (283)
T PHA02988        105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSS  175 (283)
T ss_pred             CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence            99999999843   356889999999999999999999742  288999999999999999999999999987654


No 108
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95  E-value=5.9e-27  Score=208.57  Aligned_cols=141  Identities=29%  Similarity=0.426  Sum_probs=123.4

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++... +++.||+|.+...   .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999874 5789999998753   233455677888888776 699999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++..+..++.|++.||+|||+.+   ++||||||+|||++.++.+||+|||+++..
T Consensus        81 g~L~~~i~---~~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590          81 GDLMFHIQ---KSRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             chHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            99988874   3346889999999999999999999987   999999999999999999999999999864


No 109
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94  E-value=9.7e-27  Score=200.96  Aligned_cols=152  Identities=34%  Similarity=0.505  Sum_probs=135.6

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..++|++.++||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++||||+++++.+..++..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            34678999999999999999999888889999988653 23457899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|+|.+++... ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+..
T Consensus        83 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          83 MAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCC
Confidence            9999999988543 2456788999999999999999999887   99999999999999999999999999987654


No 110
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94  E-value=7.4e-27  Score=208.38  Aligned_cols=141  Identities=28%  Similarity=0.372  Sum_probs=121.0

Q ss_pred             cccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHH-HHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMM-LIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++.. .+|+.+|+|++....   ......+..|.. +++.++||||+++++.+..++..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3699999999999976 468899999986531   223345555654 56779999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604          81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            99988773   3456889999999999999999999987   999999999999999999999999999754


No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.94  E-value=9e-27  Score=204.04  Aligned_cols=150  Identities=29%  Similarity=0.358  Sum_probs=130.7

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +|+..+.||+|+||.||++.. .+++.||+|.+....   ......+.+|+.+++.++||||+++++.+..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            477889999999999999986 468899999986532   1223457789999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++|+|..++... ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.++|+|||+++.+..
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPE  154 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence            99999998877532 2346899999999999999999999987   99999999999999999999999999987643


No 112
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=1.3e-26  Score=200.81  Aligned_cols=150  Identities=27%  Similarity=0.463  Sum_probs=134.4

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ..++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+|+.++..++||||+++++.+..++..++|||
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            346799999999999999999986 5678999999876554555678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||+|+||++++++.+||+|||+++.+.
T Consensus        87 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646          87 YCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            9999999988842   346889999999999999999999887   9999999999999999999999999998764


No 113
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94  E-value=9e-27  Score=207.67  Aligned_cols=141  Identities=29%  Similarity=0.375  Sum_probs=120.8

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHH-HHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMM-LIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|... +++.||+|.+....   ......+..|.. ++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36999999999999874 68899999986532   222344555544 56789999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 g~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575          81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            99988884   3456888999999999999999999987   999999999999999999999999999754


No 114
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.94  E-value=7.3e-27  Score=208.26  Aligned_cols=147  Identities=27%  Similarity=0.365  Sum_probs=126.9

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  226 (318)
                      +|+..+.||+|+||.||++... +++.||+|.+...   .......+..|..++..+. |++|+++++++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4677789999999999999864 5889999998753   2233456778888888886 577888999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++|+|..++.   ....+++..+..++.|++.||.|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        81 Ey~~~g~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          81 EYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHM  152 (323)
T ss_pred             cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccC
Confidence            9999999988873   3356899999999999999999999987   9999999999999999999999999998643


No 115
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94  E-value=7.2e-27  Score=207.43  Aligned_cols=155  Identities=30%  Similarity=0.480  Sum_probs=131.6

Q ss_pred             ccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          156 QCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      .+.||.|.||+||-|.+ ++|+.||||.+.+.  .....+.+.+|+.+|.+++||.||.|.-.|.+.+..++|||-+.| 
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence            47899999999999975 67999999999764  345557899999999999999999999999999999999999955 


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC---CCceEeecccceeecCCccc
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD---MNPKISDFGMARIFGGDELQ  309 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~---~~~ki~DfGla~~~~~~~~~  309 (318)
                      ++.+.+... +...|++.....++.||+.||.|||.++   |+|+||||+|||+.+.   -++||+|||.||++++..++
T Consensus       648 DMLEMILSs-EkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  648 DMLEMILSS-EKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             hHHHHHHHh-hcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence            554544333 4556888888899999999999999988   9999999999999654   36999999999999876653


Q ss_pred             cccceeecC
Q 021046          310 GNTKRIVGT  318 (318)
Q Consensus       310 ~~~~~~~Gt  318 (318)
                         +.++||
T Consensus       724 ---rsVVGT  729 (888)
T KOG4236|consen  724 ---RSVVGT  729 (888)
T ss_pred             ---hhhcCC
Confidence               456776


No 116
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.94  E-value=6.2e-27  Score=202.24  Aligned_cols=146  Identities=43%  Similarity=0.653  Sum_probs=126.0

Q ss_pred             cccccccCCcccEEEEEec-----CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          155 TQCKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       155 ~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..+.||.|.||.||+|.+.     .+..|+||.++.... ...++|.+|+..+.+++||||++++|++...+..++||||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4578999999999999876     256899999965332 3467899999999999999999999999988889999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++|+|.+++... ....+++..+..|+.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+++...
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence            9999999999654 2456899999999999999999999987   9999999999999999999999999998873


No 117
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94  E-value=1.4e-26  Score=199.53  Aligned_cols=149  Identities=32%  Similarity=0.489  Sum_probs=132.3

Q ss_pred             cCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      .+|+..+.||+|+||.||++.+.++..+|+|.+... .....++.+|+.+++.++||||+++++++...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            457788999999999999998877778999988643 2344678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|.+++...  ...+++.....++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++....
T Consensus        83 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~  152 (256)
T cd05059          83 NGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLD  152 (256)
T ss_pred             CCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccc
Confidence            99999988532  236899999999999999999999987   99999999999999999999999999986643


No 118
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94  E-value=8.3e-27  Score=207.72  Aligned_cols=141  Identities=28%  Similarity=0.366  Sum_probs=120.1

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHH-HHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMM-LIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+++.. +++.||+|.+....   ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999874 57899999986432   222344555554 67889999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|...+.   ....+++.....++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++..
T Consensus        81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603          81 GELFFHLQ---RERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence            99988773   2346788888899999999999999987   999999999999999999999999999754


No 119
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94  E-value=8.2e-27  Score=203.30  Aligned_cols=154  Identities=30%  Similarity=0.495  Sum_probs=131.5

Q ss_pred             HhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  221 (318)
                      ..++|+..+.||+|+||.||+|...      .+..||+|++..... ....++.+|+.+++.++||||+++++++..++.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4678999999999999999999753      246799998864322 234578899999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceE
Q 021046          222 NILIYEYMPNKSLDVFLFYPKK-------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI  294 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki  294 (318)
                      .++||||+++|+|.+++.....       ...+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            9999999999999998854221       234678889999999999999999987   999999999999999999999


Q ss_pred             eecccceeecC
Q 021046          295 SDFGMARIFGG  305 (318)
Q Consensus       295 ~DfGla~~~~~  305 (318)
                      +|||+++.+..
T Consensus       161 ~dfg~~~~~~~  171 (277)
T cd05062         161 GDFGMTRDIYE  171 (277)
T ss_pred             CCCCCccccCC
Confidence            99999976543


No 120
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94  E-value=1.3e-26  Score=201.22  Aligned_cols=143  Identities=30%  Similarity=0.457  Sum_probs=122.2

Q ss_pred             ccccCCcccEEEEEecC---CcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCC
Q 021046          158 KLGEGGFGPVYKGRLLN---GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKS  233 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~  233 (318)
                      .||+|+||.||+|...+   ...+++|.+..... .....+.+|+..++.++||||+++++.+.+.+..++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            59999999999997543   34688888764332 234568899999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          234 LDVFLFYPKK--KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       234 L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |.+++.....  ....++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  150 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEecccccccc
Confidence            9999864332  234567888999999999999999987   999999999999999999999999999754


No 121
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94  E-value=1.7e-26  Score=224.05  Aligned_cols=150  Identities=25%  Similarity=0.329  Sum_probs=131.2

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|++.++||+|+||.||+|... +++.||+|++.....   ...+++.+|+.++++++||||+++++++.+++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57889999999999999999864 588999999875322   22457899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          227 EYMPNKSLDVFLFYPK--------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      ||+++|+|.+++....        ....+++.....++.|++.||+|||+++   |+||||||+||+++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence            9999999999885321        1234567788999999999999999987   9999999999999999999999999


Q ss_pred             cceee
Q 021046          299 MARIF  303 (318)
Q Consensus       299 la~~~  303 (318)
                      +|+..
T Consensus       159 LAk~i  163 (932)
T PRK13184        159 AAIFK  163 (932)
T ss_pred             cceec
Confidence            99877


No 122
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=1.3e-26  Score=214.49  Aligned_cols=145  Identities=25%  Similarity=0.329  Sum_probs=126.6

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ...|.+.+.||+|+||.||++... .++.||||....      ..+.+|+.++++++||||+++++++..++..++|||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            347889999999999999999875 478899995432      3467899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +. ++|..++..  ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       242 ~~-~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        242 YR-SDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             cC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence            95 688777742  2346899999999999999999999987   999999999999999999999999999877543


No 123
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.94  E-value=1.7e-26  Score=200.02  Aligned_cols=150  Identities=34%  Similarity=0.544  Sum_probs=132.2

Q ss_pred             hcCCccccccccCCcccEEEEEecC----CcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      .++|...+.||+|+||.||+|.+..    ...||||.++.... ....+|.+|+.++..++||||+++++++...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            3578889999999999999998742    35799998875432 334578999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|||+++++|.+++...  ...+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.++|+|||+++.+.
T Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          83 ITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            99999999999998532  346899999999999999999999987   9999999999999999999999999998875


No 124
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94  E-value=1.1e-26  Score=207.45  Aligned_cols=141  Identities=28%  Similarity=0.380  Sum_probs=123.9

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++... +++.+|+|.++...   ....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999864 57899999997532   23345678899998888 699999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~  146 (327)
T cd05617          81 GDLMFHMQ---RQRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEG  146 (327)
T ss_pred             CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceec
Confidence            99988773   2346899999999999999999999987   999999999999999999999999999853


No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.94  E-value=1.5e-26  Score=205.57  Aligned_cols=141  Identities=28%  Similarity=0.392  Sum_probs=122.1

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhc-cCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAK-LQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|... +++.||||.++...   ......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999875 47899999987531   2334556677777775 4899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 g~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619          81 GDLMFHIQ---SCHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKEN  146 (316)
T ss_pred             CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence            99998884   2346889999999999999999999987   999999999999999999999999999754


No 126
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94  E-value=2.4e-26  Score=200.68  Aligned_cols=150  Identities=34%  Similarity=0.504  Sum_probs=126.7

Q ss_pred             cCCccccccccCCcccEEEEEec-CCc----EEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ++|+..+.||+|+||.||+|.+. +++    .+++|.+..... ....++..|+..+++++||||+++++++. +...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            56888899999999999999863 344    477887764332 23467888888999999999999999875 456789


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++||+++|+|.+++...  ...+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        86 i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          86 VTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            99999999999998532  346899999999999999999999987   9999999999999999999999999998765


Q ss_pred             CC
Q 021046          305 GD  306 (318)
Q Consensus       305 ~~  306 (318)
                      .+
T Consensus       161 ~~  162 (279)
T cd05111         161 PD  162 (279)
T ss_pred             CC
Confidence            43


No 127
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.94  E-value=1.8e-26  Score=202.40  Aligned_cols=152  Identities=34%  Similarity=0.581  Sum_probs=132.8

Q ss_pred             cCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ++|.+.+.||+|+||.||++...      ++..+|+|.+..........+.+|+.++.+++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            57888899999999999999742      345689999876555556689999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceE
Q 021046          225 IYEYMPNKSLDVFLFYPK----------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI  294 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki  294 (318)
                      ||||+++++|.+++....          ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence            999999999999885321          2235899999999999999999999987   999999999999999999999


Q ss_pred             eecccceeecC
Q 021046          295 SDFGMARIFGG  305 (318)
Q Consensus       295 ~DfGla~~~~~  305 (318)
                      +|||+++....
T Consensus       162 ~dfg~~~~~~~  172 (288)
T cd05093         162 GDFGMSRDVYS  172 (288)
T ss_pred             ccCCccccccC
Confidence            99999986643


No 128
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94  E-value=1.7e-26  Score=223.58  Aligned_cols=151  Identities=27%  Similarity=0.406  Sum_probs=133.3

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      .++|.+.++||+|+||.||+|... +++.||||+++....   .....+..|+.++..++||||+++++++...+..++|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            367889999999999999999875 688999999875322   2235788999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+++++|..++..   ...+++...+.++.||+.||.|||..+   |+||||||+|||++.++.+||+|||+++....
T Consensus        83 mEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          83 MEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence            999999999998843   345788999999999999999999987   99999999999999999999999999997654


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       157 ~  157 (669)
T cd05610         157 R  157 (669)
T ss_pred             C
Confidence            3


No 129
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.94  E-value=1.4e-26  Score=203.68  Aligned_cols=152  Identities=30%  Similarity=0.476  Sum_probs=129.9

Q ss_pred             hcCCccccccccCCcccEEEEEecC---------------CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN---------------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLF  213 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~---------------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~  213 (318)
                      .++|++.+.||+|+||.||++...+               ...||+|.+.... ......|.+|+.++.+++|||+++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            3578889999999999999987532               2358999987542 23345789999999999999999999


Q ss_pred             EEEEecCeeEEEEEeccCCChhhhhhcCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 021046          214 GCCIEQGENILIYEYMPNKSLDVFLFYPK---------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNI  284 (318)
Q Consensus       214 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Ni  284 (318)
                      +++..++..++||||+++++|.+++....         ....+++..+..++.|++.||.|||+.+   ++||||||+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence            99999999999999999999999885321         1124788999999999999999999987   99999999999


Q ss_pred             EEcCCCCceEeecccceeec
Q 021046          285 LLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       285 ll~~~~~~ki~DfGla~~~~  304 (318)
                      ++++++.+||+|||+++.+.
T Consensus       161 ll~~~~~~kl~dfg~~~~~~  180 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLY  180 (295)
T ss_pred             EEcCCCcEEecccccccccc
Confidence            99999999999999997654


No 130
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94  E-value=1.9e-26  Score=201.10  Aligned_cols=152  Identities=33%  Similarity=0.567  Sum_probs=132.9

Q ss_pred             hcCCccccccccCCcccEEEEEecC------CcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCee
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  222 (318)
                      .++|.+.+.||+|+||.||+|...+      +..||||.++..... ....+.+|+.++.+++|||++++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            3568888999999999999997633      478999998765443 456899999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC
Q 021046          223 ILIYEYMPNKSLDVFLFYPK-----------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN  291 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~  291 (318)
                      ++||||+++++|.+++....           ....+++.....++.|++.|+.|||+.+   ++||||||+||+++.++.
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~  160 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence            99999999999999985421           2345788999999999999999999987   999999999999999999


Q ss_pred             ceEeecccceeec
Q 021046          292 PKISDFGMARIFG  304 (318)
Q Consensus       292 ~ki~DfGla~~~~  304 (318)
                      +||+|||+++.+.
T Consensus       161 ~kl~d~g~~~~~~  173 (280)
T cd05049         161 VKIGDFGMSRDVY  173 (280)
T ss_pred             EEECCcccceecc
Confidence            9999999998654


No 131
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.94  E-value=2.5e-26  Score=199.37  Aligned_cols=146  Identities=31%  Similarity=0.417  Sum_probs=124.4

Q ss_pred             cccccCCcccEEEEEecC---CcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          157 CKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~---~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      +.||+|+||.||+|...+   +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            368999999999997643   45799998875432 23357889999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          233 SLDVFLFYPK--KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       233 ~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +|.+++....  .....++..+..++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+++....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~  152 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYK  152 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccC
Confidence            9999986432  2235677888899999999999999987   99999999999999999999999999975543


No 132
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.94  E-value=1.6e-26  Score=205.40  Aligned_cols=141  Identities=28%  Similarity=0.375  Sum_probs=122.0

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhc-cCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAK-LQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+++.. ++..||+|.++...   ......+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999875 57899999987531   2334556778777765 4899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKEN  146 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence            999888742   346888999999999999999999987   999999999999999999999999999753


No 133
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.94  E-value=1.8e-26  Score=205.95  Aligned_cols=141  Identities=28%  Similarity=0.349  Sum_probs=119.1

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHH-HHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEM-MLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++... +++.||+|.+....   ......+..|. .++..++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 56789999986532   12233444444 356788999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++..   ...+.+.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|+..
T Consensus        81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602          81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            999988843   345778888889999999999999987   999999999999999999999999999754


No 134
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94  E-value=2.4e-26  Score=203.64  Aligned_cols=148  Identities=28%  Similarity=0.455  Sum_probs=128.5

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|...+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            57888999999999999999864 577899999875432 2334678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++ +|..++..  ....+++..+..++.|++.||+|||+++   |+||||||+||+++.++.+||+|||+++...
T Consensus        86 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          86 LDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             CCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecC
Confidence            985 77776633  2345788999999999999999999987   9999999999999999999999999998654


No 135
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94  E-value=1.6e-26  Score=202.71  Aligned_cols=154  Identities=30%  Similarity=0.491  Sum_probs=130.6

Q ss_pred             HHhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecC
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~  220 (318)
                      ...++|++.+.||+|+||.||+|...      .+..||+|.+..... ....++.+|+..++.++||||+++++++...+
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            34678999999999999999999653      245799998864322 23346888999999999999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCce
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKK-------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPK  293 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~k  293 (318)
                      ..++||||+++|+|.+++.....       ....++.....++.|++.||.|||+++   ++||||||+||++++++.+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence            99999999999999999854211       234567788899999999999999887   99999999999999999999


Q ss_pred             Eeecccceeec
Q 021046          294 ISDFGMARIFG  304 (318)
Q Consensus       294 i~DfGla~~~~  304 (318)
                      |+|||+++.+.
T Consensus       160 L~Dfg~~~~~~  170 (288)
T cd05061         160 IGDFGMTRDIY  170 (288)
T ss_pred             ECcCCcccccc
Confidence            99999998654


No 136
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.94  E-value=1.8e-26  Score=209.68  Aligned_cols=148  Identities=26%  Similarity=0.403  Sum_probs=127.9

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----eeE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----ENI  223 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~  223 (318)
                      +|+..+.||+|+||.||++.. .+++.||||++....  ......+.+|+.++..++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999986 468999999986532  233467889999999999999999999998776     789


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|+||+. ++|...+.   ....+++..+..++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||+|+..
T Consensus        81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999997 56776663   3456899999999999999999999987   999999999999999999999999999876


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ..+
T Consensus       154 ~~~  156 (372)
T cd07853         154 EPD  156 (372)
T ss_pred             ccC
Confidence            543


No 137
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=1.2e-26  Score=209.84  Aligned_cols=154  Identities=29%  Similarity=0.427  Sum_probs=134.9

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      .....|.+...||+|.|++|.+|.+ .++..||||.+.+...  .....+.+|+++|..|+|||||+++.+...+..+|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            3456788999999999999999976 5688999999986533  233458899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||+.+|.+.+++...   ....+.....++.|+.+|++|||++.   |+|||||++|+|++.+..+||+|||++..+.
T Consensus       133 V~eya~~ge~~~yl~~~---gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKH---GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             EEEeccCchhHHHHHhc---ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec
Confidence            99999999999999532   33444788889999999999999998   9999999999999999999999999999987


Q ss_pred             CCc
Q 021046          305 GDE  307 (318)
Q Consensus       305 ~~~  307 (318)
                      ...
T Consensus       207 ~~~  209 (596)
T KOG0586|consen  207 YGL  209 (596)
T ss_pred             ccc
Confidence            544


No 138
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.94  E-value=4e-26  Score=200.20  Aligned_cols=151  Identities=30%  Similarity=0.509  Sum_probs=123.6

Q ss_pred             cCCccccccccCCcccEEEEEec--CCcEEEEEEccCCC--CcCHHHHHHHHHHHhcc---CCCccceEEEEEEe-----
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKL---QHRHLVRLFGCCIE-----  218 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----  218 (318)
                      ++|+..+.||+|+||.||+|...  ++..||+|.++...  ......+.+|+.++..+   +||||+++++++..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36888899999999999999863  46789999886432  22234566777776665   69999999999863     


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      ....++||||++ ++|..++... ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence            346899999997 5888887432 2345889999999999999999999987   9999999999999999999999999


Q ss_pred             cceeecCC
Q 021046          299 MARIFGGD  306 (318)
Q Consensus       299 la~~~~~~  306 (318)
                      +|+.+...
T Consensus       156 ~~~~~~~~  163 (290)
T cd07862         156 LARIYSFQ  163 (290)
T ss_pred             ceEeccCC
Confidence            99876543


No 139
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94  E-value=2.7e-26  Score=201.52  Aligned_cols=152  Identities=34%  Similarity=0.570  Sum_probs=132.5

Q ss_pred             cCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      .+|...+.||+|+||.||++...      ++..+++|.+........+.+.+|+..+++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            46788899999999999999742      345689999876555555679999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC
Q 021046          225 IYEYMPNKSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN  291 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~  291 (318)
                      ||||+++++|.+++....             ....+++..+..++.|++.||+|||+++   |+||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            999999999999985421             1235899999999999999999999987   999999999999999999


Q ss_pred             ceEeecccceeecC
Q 021046          292 PKISDFGMARIFGG  305 (318)
Q Consensus       292 ~ki~DfGla~~~~~  305 (318)
                      ++|+|||+++....
T Consensus       162 ~~l~dfg~a~~~~~  175 (291)
T cd05094         162 VKIGDFGMSRDVYS  175 (291)
T ss_pred             EEECCCCcccccCC
Confidence            99999999976543


No 140
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.94  E-value=1.7e-26  Score=207.54  Aligned_cols=153  Identities=29%  Similarity=0.449  Sum_probs=128.7

Q ss_pred             HhcCCccccccccCCcccEEEEEe------cCCcEEEEEEccCCCC-cCHHHHHHHHHHHhcc-CCCccceEEEEEEec-
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL------LNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ-  219 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-  219 (318)
                      ..++|.+.+.||+|+||.||+|..      .+++.||||+++.... .....+.+|+.++.++ +||||+++++++... 
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            346899999999999999999963      3467899999975432 2345688999999999 689999999988755 


Q ss_pred             CeeEEEEEeccCCChhhhhhcCCC--------------------------------------------------------
Q 021046          220 GENILIYEYMPNKSLDVFLFYPKK--------------------------------------------------------  243 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------  243 (318)
                      ...+++|||+++|+|.+++.....                                                        
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            467899999999999988753210                                                        


Q ss_pred             --------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          244 --------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       244 --------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                              ...+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIY  230 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccc
Confidence                    124678888999999999999999987   9999999999999999999999999998754


No 141
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94  E-value=3.4e-26  Score=199.89  Aligned_cols=152  Identities=35%  Similarity=0.563  Sum_probs=131.0

Q ss_pred             hcCCccccccccCCcccEEEEEecC------CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCee
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  222 (318)
                      .++|+..+.||+|+||.||+|....      ...||+|.+.... .....+|.+|+..+..++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            3578889999999999999997643      2579999887533 23345789999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC
Q 021046          223 ILIYEYMPNKSLDVFLFYPKK-------------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD  289 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~  289 (318)
                      +++|||+++|+|.+++.....             ...+++.....++.|++.||.|||+.+   ++|+||||+||+++++
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~  160 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEG  160 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCC
Confidence            999999999999998854321             145888999999999999999999987   9999999999999999


Q ss_pred             CCceEeecccceeec
Q 021046          290 MNPKISDFGMARIFG  304 (318)
Q Consensus       290 ~~~ki~DfGla~~~~  304 (318)
                      +.+||+|||+++...
T Consensus       161 ~~~~L~dfg~~~~~~  175 (283)
T cd05048         161 LTVKISDFGLSRDIY  175 (283)
T ss_pred             CcEEECCCcceeecc
Confidence            999999999998653


No 142
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=3.9e-26  Score=206.27  Aligned_cols=145  Identities=24%  Similarity=0.312  Sum_probs=125.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ....+|.+.+.||+|+||.||+|... ++..||+|.....      ....|+.++.+++||||+++++++..++..++|+
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            44568999999999999999999875 4678999975432      2356999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+. ++|..++..  ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       137 e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  208 (357)
T PHA03209        137 PHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPV  208 (357)
T ss_pred             EccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccc
Confidence            9995 578777643  3456899999999999999999999987   9999999999999999999999999997543


No 143
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.94  E-value=2.9e-26  Score=196.94  Aligned_cols=143  Identities=31%  Similarity=0.488  Sum_probs=126.4

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      +.||+|+||.||+|... +++.+|+|.+.... ......+.+|+.+++.++||||+++++++..++..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            46999999999999874 68899999876432 23346789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      .+++..  ....+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  145 (252)
T cd05084          81 LTFLRT--EGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEE  145 (252)
T ss_pred             HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccc
Confidence            998843  2346889999999999999999999887   9999999999999999999999999997654


No 144
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94  E-value=3.6e-26  Score=198.57  Aligned_cols=149  Identities=32%  Similarity=0.588  Sum_probs=125.0

Q ss_pred             ccccccccCCcccEEEEEecCC-c--EEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEec------Cee
Q 021046          154 STQCKLGEGGFGPVYKGRLLNG-Q--EVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ------GEN  222 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~~-~--~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~  222 (318)
                      .+.+.||+|+||.||+|...+. .  .+|+|.++..  +....+.+..|+.++..++||||+++++++...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            4568899999999999987543 2  5899988653  233456788999999999999999999988542      246


Q ss_pred             EEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          223 ILIYEYMPNKSLDVFLFYPK---KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                      +++|||+++|+|..++....   ....+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence            89999999999998874322   2345899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeecC
Q 021046          300 ARIFGG  305 (318)
Q Consensus       300 a~~~~~  305 (318)
                      ++.+..
T Consensus       159 ~~~~~~  164 (272)
T cd05075         159 SKKIYN  164 (272)
T ss_pred             ccccCc
Confidence            987653


No 145
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94  E-value=2.7e-26  Score=198.98  Aligned_cols=152  Identities=32%  Similarity=0.536  Sum_probs=131.8

Q ss_pred             hcCCccccccccCCcccEEEEEec----CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..+|.+.+.||+|+||.||+|...    .+..+|+|.++... ......+..|+.++..++||||+++++++..++..++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI   82 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            357888899999999999999763    23379999887532 2334678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||+++++|.+++...  ...+++.+...++.|++.||.|||+.+   ++||||||+||+++.++.++|+|||+++.+.
T Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          83 VTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            99999999999998532  346889999999999999999999987   9999999999999999999999999998775


Q ss_pred             CC
Q 021046          305 GD  306 (318)
Q Consensus       305 ~~  306 (318)
                      ..
T Consensus       158 ~~  159 (267)
T cd05066         158 DD  159 (267)
T ss_pred             cc
Confidence            43


No 146
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.94  E-value=3.1e-26  Score=201.65  Aligned_cols=153  Identities=30%  Similarity=0.489  Sum_probs=131.0

Q ss_pred             hcCCccccccccCCcccEEEEEec-----------------CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccce
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-----------------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVR  211 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-----------------~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~  211 (318)
                      .++|++.++||+|+||.||++...                 ++..+|+|.+.... ......+.+|+.++..++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            457899999999999999998532                 23468999987543 233567899999999999999999


Q ss_pred             EEEEEEecCeeEEEEEeccCCChhhhhhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 021046          212 LFGCCIEQGENILIYEYMPNKSLDVFLFYPKK--------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASN  283 (318)
Q Consensus       212 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~N  283 (318)
                      +++++..++..+++|||+++|+|..++.....        ...+++.+...++.|++.||+|||+.+   ++|+||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence            99999999999999999999999998854321        235788899999999999999999987   9999999999


Q ss_pred             EEEcCCCCceEeecccceeecC
Q 021046          284 ILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       284 ill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++.++.++|+|||+++.+..
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~  182 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYS  182 (296)
T ss_pred             EEEcCCCCEEeccCcccccccC
Confidence            9999999999999999986543


No 147
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.94  E-value=3.7e-26  Score=200.95  Aligned_cols=153  Identities=31%  Similarity=0.475  Sum_probs=132.2

Q ss_pred             hcCCccccccccCCcccEEEEEecC-----------------CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccce
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-----------------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVR  211 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----------------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~  211 (318)
                      ..+|++.+.||+|+||.||++....                 +..||+|.+.... ....+.+.+|+.++.+++|||+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4678899999999999999997642                 2458999987543 234567899999999999999999


Q ss_pred             EEEEEEecCeeEEEEEeccCCChhhhhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 021046          212 LFGCCIEQGENILIYEYMPNKSLDVFLFYPK--------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASN  283 (318)
Q Consensus       212 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~N  283 (318)
                      +++++..++..++++||+++++|..++....        ....+++..+..++.|++.||.|||+.+   ++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence            9999999999999999999999999885432        1236899999999999999999999887   9999999999


Q ss_pred             EEEcCCCCceEeecccceeecC
Q 021046          284 ILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       284 ill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++.++.++|+|||+++.+..
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~  182 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYS  182 (296)
T ss_pred             eeecCCCceEEccccceeeccc
Confidence            9999999999999999986543


No 148
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=2e-27  Score=215.05  Aligned_cols=156  Identities=31%  Similarity=0.472  Sum_probs=130.7

Q ss_pred             cccccccCCcccEEEEEe-cCCcEEEEEEcc--C--CCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCe--eEEEEE
Q 021046          155 TQCKLGEGGFGPVYKGRL-LNGQEVAVKRLS--N--QSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE--NILIYE  227 (318)
Q Consensus       155 ~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~--~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e  227 (318)
                      ....||+|+|-+||+|.+ .+|.+||--.++  .  .++...++|..|+.+|+.|+||||++++..|.+..+  ..+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            446899999999999976 347777743222  1  244556899999999999999999999999998765  789999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~~~~  306 (318)
                      .+..|+|..|+.   +.+.++.+....|++||++||.|||++. +||||||||.+||+|+. -|.|||+|+|||.++...
T Consensus       124 L~TSGtLr~Y~k---k~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  124 LFTSGTLREYRK---KHRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             cccCCcHHHHHH---HhccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence            999999999984   4456788899999999999999999985 78999999999999975 589999999999998755


Q ss_pred             ccccccceeecC
Q 021046          307 ELQGNTKRIVGT  318 (318)
Q Consensus       307 ~~~~~~~~~~Gt  318 (318)
                      ..    +.++||
T Consensus       200 ~a----ksvIGT  207 (632)
T KOG0584|consen  200 HA----KSVIGT  207 (632)
T ss_pred             cc----ceeccC
Confidence            43    347787


No 149
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.94  E-value=3.9e-26  Score=200.39  Aligned_cols=150  Identities=34%  Similarity=0.552  Sum_probs=128.6

Q ss_pred             CCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      +|.+.+.||+|+||.||+|...      ....+++|.+..... ....++.+|+.+++.++||||+++++.+..++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4677889999999999999752      235788988875432 234678899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 021046          225 IYEYMPNKSLDVFLFYPK---------------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASN  283 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~N  283 (318)
                      ++||+++|+|.+++....                     ....+++...+.++.|++.||+|||+.+   ++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence            999999999999875321                     1245889999999999999999999887   9999999999


Q ss_pred             EEEcCCCCceEeecccceeec
Q 021046          284 ILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       284 ill~~~~~~ki~DfGla~~~~  304 (318)
                      |++++++.+||+|||+++.+.
T Consensus       158 ill~~~~~~kl~dfg~~~~~~  178 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVY  178 (290)
T ss_pred             EEEcCCCcEEecccccccccc
Confidence            999999999999999998654


No 150
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.94  E-value=1.3e-26  Score=207.87  Aligned_cols=154  Identities=29%  Similarity=0.457  Sum_probs=129.3

Q ss_pred             HhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCC-cCHHHHHHHHHHHhcc-CCCccceEEEEEEec-
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ-  219 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-  219 (318)
                      +.++|++.+.||+|+||.||+|...      +++.||+|+++.... ...+.+..|+.++.++ +||||++++++|... 
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            4568999999999999999999642      347899999875322 2345678899999999 899999999988754 


Q ss_pred             CeeEEEEEeccCCChhhhhhcCCC--------------------------------------------------------
Q 021046          220 GENILIYEYMPNKSLDVFLFYPKK--------------------------------------------------------  243 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------  243 (318)
                      ...++++||+++|+|..++.....                                                        
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            567899999999999988753211                                                        


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          244 --KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       244 --~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                        ...++|..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||+|+.+..
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~  225 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK  225 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhccc
Confidence              136889999999999999999999887   99999999999999999999999999987643


No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=2.9e-26  Score=198.66  Aligned_cols=150  Identities=27%  Similarity=0.473  Sum_probs=134.2

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ..++|...+.||+|+||.||+|.. .+++.||+|.++.........+.+|+.++..++||||+++++.+..++..++|+|
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            345788889999999999999976 4588999999876554555678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++++|.+++.   ....+++.+...++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++..+.
T Consensus        87 ~~~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645          87 FCGGGSLQDIYH---VTGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             ccCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence            999999999874   3346889999999999999999999987   9999999999999999999999999997664


No 152
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.94  E-value=2.8e-26  Score=204.03  Aligned_cols=141  Identities=30%  Similarity=0.402  Sum_probs=123.6

Q ss_pred             cccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++... +++.||+|.++..   .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 4789999998753   233455677888888877 699999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++..
T Consensus        81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  146 (318)
T cd05570          81 GDLMFHIQ---RSGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEG  146 (318)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeec
Confidence            99988773   3346899999999999999999999987   999999999999999999999999999753


No 153
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94  E-value=3.5e-26  Score=202.09  Aligned_cols=154  Identities=30%  Similarity=0.521  Sum_probs=132.5

Q ss_pred             HhcCCccccccccCCcccEEEEEec--------CCcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIE  218 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~  218 (318)
                      ..++|.+.+.||+|+||.||++...        ++..||+|.+.... .....++.+|+.++..+ +||||+++++++..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            4567888899999999999999641        24479999887532 34456789999999999 89999999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPKK-------------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL  285 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nil  285 (318)
                      .+..+++|||+++|+|..++.....             ...+++..+..++.|++.||.|||+.+   ++||||||+||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence            9999999999999999999864321             235788999999999999999999987   999999999999


Q ss_pred             EcCCCCceEeecccceeecC
Q 021046          286 LDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       286 l~~~~~~ki~DfGla~~~~~  305 (318)
                      ++.++.+||+|||+|+.+..
T Consensus       170 i~~~~~~kl~D~g~~~~~~~  189 (304)
T cd05101         170 VTENNVMKIADFGLARDVNN  189 (304)
T ss_pred             EcCCCcEEECCCccceeccc
Confidence            99999999999999987754


No 154
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.94  E-value=2.7e-26  Score=201.63  Aligned_cols=155  Identities=30%  Similarity=0.507  Sum_probs=133.5

Q ss_pred             HHhcCCccccccccCCcccEEEEEecC------CcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEec
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ  219 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~  219 (318)
                      ...++|+..+.||+|+||.||++....      ...+|+|.+.... .....++.+|+.++.++ +||||+++++++..+
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            345678889999999999999997632      3579999887532 23345688999999999 899999999999999


Q ss_pred             CeeEEEEEeccCCChhhhhhcC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE
Q 021046          220 GENILIYEYMPNKSLDVFLFYP-------------KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL  286 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill  286 (318)
                      +..+++|||+++|+|..++...             .....+++..+..++.|++.||.|||+.+   |+||||||+||++
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~  165 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV  165 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence            9999999999999999988532             22456899999999999999999999887   9999999999999


Q ss_pred             cCCCCceEeecccceeecC
Q 021046          287 DSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       287 ~~~~~~ki~DfGla~~~~~  305 (318)
                      +.++.+||+|||+++.+..
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~  184 (293)
T cd05053         166 TEDHVMKIADFGLARDIHH  184 (293)
T ss_pred             cCCCeEEeCcccccccccc
Confidence            9999999999999987654


No 155
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.94  E-value=6.3e-26  Score=196.21  Aligned_cols=151  Identities=32%  Similarity=0.518  Sum_probs=131.5

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .++|.+.++||+|+||.||+|...+...||+|+++.. ....+.+.+|+.++..++||||+++++.+. .+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence            4568999999999999999998877778999999753 234567899999999999999999999874 45689999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ++|+|.+++... ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+...
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~  155 (262)
T cd05071          83 SKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN  155 (262)
T ss_pred             CCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence            999999998532 2346789999999999999999999987   999999999999999999999999999876543


No 156
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94  E-value=4.1e-26  Score=202.08  Aligned_cols=149  Identities=27%  Similarity=0.329  Sum_probs=130.1

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|+.++.+++||||+++++++..++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            36888999999999999999764 57889999886532 22345688999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++++|.+++..   ...+++.....++.|++.||.|||+..  +++|+||||+||+++.++.+||+|||++..+.
T Consensus        81 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615          81 MDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            999999999843   356889999999999999999999742  39999999999999999999999999997653


No 157
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94  E-value=2.8e-26  Score=200.52  Aligned_cols=152  Identities=34%  Similarity=0.512  Sum_probs=130.2

Q ss_pred             cCCccccccccCCcccEEEEEecC------CcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      .+|.+.+.||+|+||.||+|...+      ++.||+|+++..... ..+.+..|+.++..++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            457778899999999999997632      468999999754332 2356889999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC
Q 021046          224 LIYEYMPNKSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM  290 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~  290 (318)
                      +++||+++++|..++....             ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~  161 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL  161 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence            9999999999999874221             1245888999999999999999999987   99999999999999999


Q ss_pred             CceEeecccceeecC
Q 021046          291 NPKISDFGMARIFGG  305 (318)
Q Consensus       291 ~~ki~DfGla~~~~~  305 (318)
                      .+||+|||+++.+..
T Consensus       162 ~~kl~Dfg~~~~~~~  176 (283)
T cd05091         162 NVKISDLGLFREVYA  176 (283)
T ss_pred             ceEeccccccccccc
Confidence            999999999986643


No 158
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.94  E-value=2.8e-26  Score=199.75  Aligned_cols=141  Identities=28%  Similarity=0.404  Sum_probs=120.0

Q ss_pred             ccccCCcccEEEEEecC-------------------------CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceE
Q 021046          158 KLGEGGFGPVYKGRLLN-------------------------GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRL  212 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~-------------------------~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l  212 (318)
                      .||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997421                         13588998875444445678899999999999999999


Q ss_pred             EEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC--
Q 021046          213 FGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM--  290 (318)
Q Consensus       213 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~--  290 (318)
                      ++++..++..++||||+++|+|+.++..  ....+++..+..++.|++.||+|||+++   |+||||||+||+++..+  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence            9999999999999999999999988843  2346889999999999999999999887   99999999999997654  


Q ss_pred             -----CceEeecccceee
Q 021046          291 -----NPKISDFGMARIF  303 (318)
Q Consensus       291 -----~~ki~DfGla~~~  303 (318)
                           .+|++|||++...
T Consensus       157 ~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             cCccceeeecCCcccccc
Confidence                 3799999998654


No 159
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.94  E-value=2.5e-26  Score=200.55  Aligned_cols=151  Identities=28%  Similarity=0.435  Sum_probs=135.2

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +.++|++.+.||+|+||.||++... ++..+|+|.+........+.+..|+.++++++|||++++++.+..++..++|||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            3567999999999999999999874 578999999876555566789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++++|..++..  ....+++..+..++.|++.||.|||+.+   |+|+||+|+||+++.++.++|+|||++....
T Consensus        83 ~~~~~~L~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          83 FCDGGALDSIMLE--LERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             ccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhc
Confidence            9999999998743  2346899999999999999999999987   9999999999999999999999999987654


No 160
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=5.4e-26  Score=207.90  Aligned_cols=146  Identities=23%  Similarity=0.348  Sum_probs=127.3

Q ss_pred             HhcCCccccccccCCcccEEEEEec---CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ...+|.+.+.||+|+||.||++...   .+..||+|.+...     ..+.+|+.+++.++||||+++++++...+..++|
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence            3457999999999999999999753   3568999988643     2356899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+. ++|..++   .....+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       165 ~e~~~-~~l~~~l---~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        165 MPKYK-CDLFTYV---DRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             ehhcC-CCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            99986 5777777   23457899999999999999999999987   99999999999999999999999999987654


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       238 ~  238 (392)
T PHA03207        238 H  238 (392)
T ss_pred             c
Confidence            4


No 161
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.94  E-value=3.5e-26  Score=199.56  Aligned_cols=154  Identities=29%  Similarity=0.468  Sum_probs=133.2

Q ss_pred             HhcCCccccccccCCcccEEEEEecC-----CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEe-cCe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE-QGE  221 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~  221 (318)
                      ..++|...+.||+|+||.||+|...+     +..|++|++.... ......+.+|+.++++++|||++++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            45788889999999999999998755     6789999887542 2335678899999999999999999999876 467


Q ss_pred             eEEEEEeccCCChhhhhhcCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEee
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKK-----RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISD  296 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~D  296 (318)
                      .++++||+++|+|..++......     ..+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence            89999999999999998543322     56899999999999999999999887   99999999999999999999999


Q ss_pred             cccceeecC
Q 021046          297 FGMARIFGG  305 (318)
Q Consensus       297 fGla~~~~~  305 (318)
                      ||+++.+..
T Consensus       161 ~g~~~~~~~  169 (280)
T cd05043         161 NALSRDLFP  169 (280)
T ss_pred             CCCcccccC
Confidence            999987643


No 162
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94  E-value=6.8e-26  Score=196.74  Aligned_cols=150  Identities=31%  Similarity=0.543  Sum_probs=127.8

Q ss_pred             CccccccccCCcccEEEEEecC----CcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCe-----
Q 021046          153 FSTQCKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE-----  221 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----  221 (318)
                      |.+.+.||+|+||.||+|....    +..||+|+++...  ......+.+|+..++.++|||++++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999998642    3679999987532  2334678999999999999999999999876554     


Q ss_pred             -eEEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          222 -NILIYEYMPNKSLDVFLFYPK---KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       222 -~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                       .++++||+++|+|..++....   ....+++.....++.|++.||.|||+.+   ++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence             689999999999998885432   2346899999999999999999999987   999999999999999999999999


Q ss_pred             ccceeecC
Q 021046          298 GMARIFGG  305 (318)
Q Consensus       298 Gla~~~~~  305 (318)
                      |+++.+..
T Consensus       158 g~~~~~~~  165 (273)
T cd05035         158 GLSKKIYS  165 (273)
T ss_pred             cceeeccc
Confidence            99987643


No 163
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94  E-value=4.6e-26  Score=197.68  Aligned_cols=150  Identities=32%  Similarity=0.536  Sum_probs=131.1

Q ss_pred             cCCccccccccCCcccEEEEEecC-C---cEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLN-G---QEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~-~---~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      .+|...+.||+|+||.||+|.... +   ..||||.+... ......+|..|+.+++.++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            457788999999999999998643 3   36999998754 233456899999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+++|+|..++...  ...+++.++..++.|++.||.|||+++   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          84 TEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             EecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence            9999999999988532  346889999999999999999999987   99999999999999999999999999987654


No 164
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94  E-value=5.5e-26  Score=198.47  Aligned_cols=151  Identities=34%  Similarity=0.558  Sum_probs=132.2

Q ss_pred             cCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ++|...++||+|+||.||++...      ++..+|+|.+..........+.+|+.++..++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            46777889999999999999642      355799998876655566789999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCc
Q 021046          225 IYEYMPNKSLDVFLFYPKK------------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNP  292 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~  292 (318)
                      +|||+++|+|.+++.....            ...+++..+..++.|++.|++|||+.+   ++||||||+||++++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence            9999999999998854321            135889999999999999999999887   9999999999999999999


Q ss_pred             eEeecccceeec
Q 021046          293 KISDFGMARIFG  304 (318)
Q Consensus       293 ki~DfGla~~~~  304 (318)
                      ||+|||+++.+.
T Consensus       162 kL~dfg~~~~~~  173 (280)
T cd05092         162 KIGDFGMSRDIY  173 (280)
T ss_pred             EECCCCceeEcC
Confidence            999999997654


No 165
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.94  E-value=2.3e-27  Score=212.15  Aligned_cols=149  Identities=34%  Similarity=0.500  Sum_probs=128.8

Q ss_pred             CccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          153 FSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      ...++-||.|+-|-||+|++. ++.||||+++...       ..+++-|++|+||||+.+.|+|.....+++|||||+.|
T Consensus       126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence            344568999999999999985 5899999887532       34788999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCcccccc
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDELQGNT  312 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~~~~~~  312 (318)
                      .|...|   +....+.......+..+||.||.|||.+.   |||||||+-||||+.+..+||+|||.++.+.+...   .
T Consensus       198 qL~~VL---ka~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST---k  268 (904)
T KOG4721|consen  198 QLYEVL---KAGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKST---K  268 (904)
T ss_pred             cHHHHH---hccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhhh---h
Confidence            999999   45567788888999999999999999886   99999999999999999999999999998865422   2


Q ss_pred             ceeecC
Q 021046          313 KRIVGT  318 (318)
Q Consensus       313 ~~~~Gt  318 (318)
                      ..+.||
T Consensus       269 MSFaGT  274 (904)
T KOG4721|consen  269 MSFAGT  274 (904)
T ss_pred             hhhhhh
Confidence            235665


No 166
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94  E-value=6.6e-26  Score=195.70  Aligned_cols=152  Identities=36%  Similarity=0.540  Sum_probs=136.3

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..++|.+.+.||+|+||.||++...+++.+|||.+... .....++.+|+.++++++|||++++++++..+...++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            45788999999999999999999888889999998753 34557899999999999999999999999998999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++... ....+++..+..++.|++.|+.|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        83 ~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~  155 (261)
T cd05034          83 MSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIED  155 (261)
T ss_pred             cCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccc
Confidence            9999999988542 2346899999999999999999999987   99999999999999999999999999987753


No 167
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94  E-value=6.4e-26  Score=196.20  Aligned_cols=151  Identities=30%  Similarity=0.504  Sum_probs=133.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .+|...+.||+|+||.||+|... .++.||+|.+... .....++.+|+.++..++||||+++++++..++..+++|||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            45778889999999999999864 4788999998753 344568999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ++++|.+++... ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.....
T Consensus        85 ~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~  157 (263)
T cd05052          85 TYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  157 (263)
T ss_pred             CCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence            999999988432 2346899999999999999999999987   999999999999999999999999999877543


No 168
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.94  E-value=6.9e-26  Score=195.57  Aligned_cols=151  Identities=36%  Similarity=0.534  Sum_probs=133.3

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..++|+..++||+|+||.||+|...+++.||+|.+.... ....++.+|+.++++++|||++++++++ .++..+++|||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence            356788899999999999999998889999999987533 3456899999999999999999999986 45678999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++... ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.++|+|||++..+..
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05067          82 MENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIED  154 (260)
T ss_pred             CCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence            9999999987543 2456889999999999999999999887   99999999999999999999999999987763


No 169
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94  E-value=3e-26  Score=200.60  Aligned_cols=152  Identities=25%  Similarity=0.396  Sum_probs=132.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||+|+||.||++... ++..+|+|.+... .......+.+|+.++.+++||||+++++.+..++..++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            36788899999999999999875 6889999988653 223346788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++++|..++........+++..+..++.|++.||.|||+..  +++|+||||+||+++.++.+||+|||++..+.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  154 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV  154 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            999999988854333447899999999999999999999742  39999999999999999999999999997653


No 170
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94  E-value=9.8e-26  Score=197.13  Aligned_cols=149  Identities=34%  Similarity=0.542  Sum_probs=130.5

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|...+.||+|+||.||+|... ++..||+|.+....  ......+.+|+.++.+++|||++++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4778899999999999999874 68899999886432  22346788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++ ++|..++........+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            97 688887754444467899999999999999999999987   9999999999999999999999999998664


No 171
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.94  E-value=4.4e-26  Score=198.49  Aligned_cols=154  Identities=29%  Similarity=0.474  Sum_probs=132.3

Q ss_pred             HhcCCccccccccCCcccEEEEEecC------CcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  221 (318)
                      ..++|.+.+.||+|+||.||+|....      +..||+|.+..... .....+.+|+.++..++|||++++++++...+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            34678889999999999999997642      36899999865432 334578899999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceE
Q 021046          222 NILIYEYMPNKSLDVFLFYPKK-------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI  294 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki  294 (318)
                      .++||||+++|+|..++.....       ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl  160 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEE
Confidence            9999999999999998854321       234788999999999999999999887   999999999999999999999


Q ss_pred             eecccceeecC
Q 021046          295 SDFGMARIFGG  305 (318)
Q Consensus       295 ~DfGla~~~~~  305 (318)
                      +|||+++.+..
T Consensus       161 ~dfg~~~~~~~  171 (277)
T cd05032         161 GDFGMTRDIYE  171 (277)
T ss_pred             CCcccchhhcc
Confidence            99999986644


No 172
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=5.2e-26  Score=200.38  Aligned_cols=151  Identities=26%  Similarity=0.405  Sum_probs=135.3

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ...+|...+.||+|+||.||++.. .+++.||+|.+........+.+..|+.+++.++|||++++++++..++..++|||
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            447899999999999999999986 5689999999876555556678899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+++++|..++.    ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.++|+|||++.....+
T Consensus        97 ~~~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~  168 (297)
T cd06656          97 YLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (297)
T ss_pred             ccCCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence            999999999883    245788999999999999999999987   999999999999999999999999999876543


No 173
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.94  E-value=5.9e-26  Score=195.48  Aligned_cols=149  Identities=30%  Similarity=0.529  Sum_probs=133.7

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .++|+..+.||+|+||.||++... ++.||+|.+..... ..+.+.+|+.++.+++|||++++++++...+..++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            457888899999999999999874 78999999976543 5678999999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++++|.+++... ....+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++...
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          83 AKGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccc
Confidence            999999988532 2236899999999999999999999987   9999999999999999999999999998764


No 174
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.94  E-value=8.2e-26  Score=197.94  Aligned_cols=148  Identities=28%  Similarity=0.347  Sum_probs=129.1

Q ss_pred             CccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      |...+.||+|+||+||++.. .+++.+|+|.+....   ......+.+|+.++..++|+|++++.+++..++..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            56678899999999999976 468899999986532   12234578899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++++|..++... ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++....
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            9999998877432 2346899999999999999999999987   9999999999999999999999999997654


No 175
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94  E-value=9.2e-26  Score=196.98  Aligned_cols=145  Identities=27%  Similarity=0.410  Sum_probs=127.7

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||+|+||.||+|.. .+++.||+|.+... ......++.+|+.++.+++||||+++++++..++..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3677889999999999999975 56889999988654 223345788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|..+.       .+++.....++.|++.||.|||+.+   |+|+||||+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            9999996543       3678888899999999999999987   99999999999999999999999999987643


No 176
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.94  E-value=1.2e-26  Score=209.46  Aligned_cols=155  Identities=30%  Similarity=0.508  Sum_probs=134.0

Q ss_pred             HHHhcCCccccccccCCcccEEEEEecC---Cc--EEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRLLN---GQ--EVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG  220 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~---~~--~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~  220 (318)
                      +...+.....++||.|.||.||+|...+   |+  .||||.-+.. .....+.|+.|..+|+.++||||++|+|+|.+ .
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~  463 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q  463 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence            3444556677899999999999997532   33  5899988763 45567789999999999999999999999987 4


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      +.|+|||.++-|.|..||..  +...++..+...++.||+.||+|||+..   +|||||.++|||+.+..-+||+||||+
T Consensus       464 P~WivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLS  538 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLS  538 (974)
T ss_pred             ceeEEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchh
Confidence            78999999999999999954  3456888899999999999999999987   999999999999999999999999999


Q ss_pred             eeecCCc
Q 021046          301 RIFGGDE  307 (318)
Q Consensus       301 ~~~~~~~  307 (318)
                      |.+.++.
T Consensus       539 R~~ed~~  545 (974)
T KOG4257|consen  539 RYLEDDA  545 (974)
T ss_pred             hhccccc
Confidence            9987664


No 177
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.94  E-value=4.9e-26  Score=197.54  Aligned_cols=142  Identities=27%  Similarity=0.432  Sum_probs=120.7

Q ss_pred             ccccCCcccEEEEEecCC---cEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCC
Q 021046          158 KLGEGGFGPVYKGRLLNG---QEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKS  233 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~  233 (318)
                      .||+|+||.||++...++   ..+++|.+.... ....+.+.+|+..++.++||||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            699999999999975443   346677665432 2345689999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          234 LDVFLFYPKK-KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       234 L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      |..++..... ....++.....++.|++.||+|||+.+   ++||||||+|||++.++.+||+|||++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccc
Confidence            9998864322 345677788899999999999999887   99999999999999999999999999864


No 178
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94  E-value=6.2e-26  Score=198.50  Aligned_cols=150  Identities=33%  Similarity=0.552  Sum_probs=130.0

Q ss_pred             cCCccccccccCCcccEEEEEe-----cCCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEec--Cee
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~  222 (318)
                      ..|...+.||+|+||.||++..     .++..||+|.++... ......+.+|+.+++.++|||++++++++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            4567889999999999999974     357789999987543 33446789999999999999999999999875  567


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence            8999999999999988432  345899999999999999999999987   99999999999999999999999999987


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      +..
T Consensus       159 ~~~  161 (284)
T cd05079         159 IET  161 (284)
T ss_pred             ccc
Confidence            653


No 179
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94  E-value=1e-25  Score=195.11  Aligned_cols=152  Identities=24%  Similarity=0.456  Sum_probs=132.6

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|++.+.||+|+||.||+|+. .+++.||||.+....   ......+.+|+.+++.++|||++++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            5788899999999999999986 468899999876422   233456889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|..++.... ....+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999988875322 3456788999999999999999999987   99999999999999999999999999987654


No 180
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.94  E-value=5.2e-26  Score=203.36  Aligned_cols=139  Identities=27%  Similarity=0.366  Sum_probs=118.7

Q ss_pred             cccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhcc---CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          159 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKL---QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      ||+|+||.||+|+.. +++.||||++....   ......+..|..++...   +||||+++++.+.+.+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999864 58899999986432   12233455566666655   699999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+|..++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 g~L~~~l~---~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~  146 (330)
T cd05586          81 GELFWHLQ---KEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKAN  146 (330)
T ss_pred             ChHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence            99988874   3456889999999999999999999987   999999999999999999999999999754


No 181
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.94  E-value=6.9e-26  Score=195.19  Aligned_cols=142  Identities=31%  Similarity=0.501  Sum_probs=122.5

Q ss_pred             cccccCCcccEEEEEecCCc-----------EEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          157 CKLGEGGFGPVYKGRLLNGQ-----------EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~-----------~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      +.||+|+||.||+|.+.+..           .+++|.+...... ...+.+|+.+++.++||||+++++++.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46999999999999875433           5788877654333 6789999999999999999999999988 788999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-------CceEeecc
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-------NPKISDFG  298 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-------~~ki~DfG  298 (318)
                      |||+++|+|..++...  ...+++..+..++.|++.||+|||+++   |+||||||+||+++.++       .+||+|||
T Consensus        79 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          79 EEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence            9999999999988542  226889999999999999999999887   99999999999999888       79999999


Q ss_pred             cceeecC
Q 021046          299 MARIFGG  305 (318)
Q Consensus       299 la~~~~~  305 (318)
                      ++..+..
T Consensus       154 ~a~~~~~  160 (259)
T cd05037         154 IPITVLS  160 (259)
T ss_pred             ccccccc
Confidence            9987543


No 182
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.5e-27  Score=214.14  Aligned_cols=152  Identities=34%  Similarity=0.493  Sum_probs=131.2

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccC---CCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSN---QSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      +...|..++.||.|+||-||.|+. .+.+.||||++.-   .+...+.++..|+..|..++|||++.+-||+..+...||
T Consensus        24 PEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWL  103 (948)
T KOG0577|consen   24 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWL  103 (948)
T ss_pred             HHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHH
Confidence            345677888999999999999976 5678899999873   244557889999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |||||- |+-.+++.-  ..+++.+-.+..|..+.+.||+|||+..   .||||||+-|||+++.|.|||+|||-|.+..
T Consensus       104 VMEYCl-GSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~  177 (948)
T KOG0577|consen  104 VMEYCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA  177 (948)
T ss_pred             HHHHHh-ccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC
Confidence            999995 455665532  2456788888899999999999999987   9999999999999999999999999998876


Q ss_pred             CC
Q 021046          305 GD  306 (318)
Q Consensus       305 ~~  306 (318)
                      +-
T Consensus       178 PA  179 (948)
T KOG0577|consen  178 PA  179 (948)
T ss_pred             ch
Confidence            53


No 183
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.94  E-value=9.1e-26  Score=198.25  Aligned_cols=150  Identities=31%  Similarity=0.488  Sum_probs=133.9

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      .+.|++.+.||+|+||.||+|+.. ++..+++|.+........+.+.+|+.+++.++|||++++++.+..++..++||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            467888999999999999999874 4789999999876555667889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++++|..++..  ....+++..+..++.|++.+|.|||+.+   ++||||||+||+++.++.+||+|||++....
T Consensus        91 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  161 (292)
T cd06644          91 CPGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNV  161 (292)
T ss_pred             CCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecc
Confidence            999999887643  2346899999999999999999999887   9999999999999999999999999987643


No 184
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.94  E-value=1.4e-25  Score=195.65  Aligned_cols=143  Identities=27%  Similarity=0.389  Sum_probs=123.7

Q ss_pred             cccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||+|+||.||++... +|+.+|+|.+....   ......+..|+.++.+++||||+++++++..+...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999764 58999999986422   12234556799999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ..++... ....+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence            8877432 2345889999999999999999999987   99999999999999999999999999987654


No 185
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.94  E-value=1.2e-25  Score=194.04  Aligned_cols=150  Identities=33%  Similarity=0.521  Sum_probs=132.0

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .++|++.+.||+|+||.||++...++..+|+|.+.... ...+.+.+|+.++.+++|||++++++++. .+..+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            45788899999999999999998888899999987643 34567999999999999999999999875 45689999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++++|.+++... ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.++|+|||++..+..
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          83 SKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIED  154 (260)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence            999999988542 2345889999999999999999999987   99999999999999999999999999987654


No 186
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94  E-value=1.2e-25  Score=196.58  Aligned_cols=150  Identities=30%  Similarity=0.434  Sum_probs=131.6

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|+..+.||+|+||.||+|... +++.||+|++....  ....+.+.+|+.+++.++|||++++++++..++..++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46888899999999999999875 58899999886432  2234568899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+++++|..++.   ....+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||++..+...
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          81 YCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             ccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            999998887763   3346899999999999999999999987   999999999999999999999999999877543


No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94  E-value=6.3e-26  Score=200.43  Aligned_cols=150  Identities=34%  Similarity=0.570  Sum_probs=128.8

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCc--EEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQ--EVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~--~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l  224 (318)
                      .++|++.+.||+|+||.||+|.+. ++.  .+++|.++... ......+.+|+.++.++ +||||+++++++..++..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            357888899999999999999864 343  46888776432 23445788999999999 89999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC
Q 021046          225 IYEYMPNKSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN  291 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~  291 (318)
                      ||||+++|+|.+++....             ....+++.++..++.|++.||+|||+.+   ++||||||+|||+++++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence            999999999999885432             1236889999999999999999999887   999999999999999999


Q ss_pred             ceEeeccccee
Q 021046          292 PKISDFGMARI  302 (318)
Q Consensus       292 ~ki~DfGla~~  302 (318)
                      +||+|||+++.
T Consensus       163 ~kl~dfg~~~~  173 (303)
T cd05088         163 AKIADFGLSRG  173 (303)
T ss_pred             EEeCccccCcc
Confidence            99999999964


No 188
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94  E-value=6.5e-26  Score=210.01  Aligned_cols=149  Identities=22%  Similarity=0.384  Sum_probs=122.6

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEec--------
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--------  219 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------  219 (318)
                      ..++|...+.||+|+||.||+|.. .+++.||||++....    ....+|+.+++.++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            456899999999999999999986 468899999886432    2345799999999999999999987542        


Q ss_pred             CeeEEEEEeccCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeec
Q 021046          220 GENILIYEYMPNKSLDVFLFY-PKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDF  297 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~Df  297 (318)
                      ...++||||+++ +|..++.. ......+++.....++.||+.||.|||+.+   |+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence            135789999985 56555532 234567899999999999999999999987   99999999999998665 7999999


Q ss_pred             ccceeecC
Q 021046          298 GMARIFGG  305 (318)
Q Consensus       298 Gla~~~~~  305 (318)
                      |+|+.+..
T Consensus       216 Gla~~~~~  223 (440)
T PTZ00036        216 GSAKNLLA  223 (440)
T ss_pred             ccchhccC
Confidence            99987654


No 189
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94  E-value=6.6e-26  Score=200.63  Aligned_cols=152  Identities=31%  Similarity=0.518  Sum_probs=131.3

Q ss_pred             hcCCccccccccCCcccEEEEEec--------CCcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEec
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ  219 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~  219 (318)
                      .++|.+.+.||+|+||.||++...        +...+|+|.+.... .....++..|+.++..+ +||||+++++++..+
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            467999999999999999999752        23469999987542 23445788899999999 799999999999999


Q ss_pred             CeeEEEEEeccCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE
Q 021046          220 GENILIYEYMPNKSLDVFLFYPKK-------------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL  286 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill  286 (318)
                      +..++||||+++|+|.+++.....             ...+++.++..++.|++.||+|||+.+   ++||||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence            999999999999999999864321             235889999999999999999999887   9999999999999


Q ss_pred             cCCCCceEeecccceeec
Q 021046          287 DSDMNPKISDFGMARIFG  304 (318)
Q Consensus       287 ~~~~~~ki~DfGla~~~~  304 (318)
                      +.++.+||+|||+|+.+.
T Consensus       174 ~~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         174 TEDNVMKIADFGLARDIH  191 (307)
T ss_pred             cCCCcEEECCCccccccc
Confidence            999999999999997654


No 190
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94  E-value=1.3e-25  Score=192.70  Aligned_cols=144  Identities=33%  Similarity=0.481  Sum_probs=127.3

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChh
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLD  235 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~  235 (318)
                      ++||+|+||.||+|...++..+|+|.+...... ....+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            369999999999999888899999998764332 2346889999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          236 VFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       236 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      .++...  ...+++..+..++.|++.+|.|||+.+   ++||||||+||+++.++.+||+|||++.....
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  145 (250)
T cd05085          81 SFLRKK--KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDD  145 (250)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccc
Confidence            987432  345789999999999999999999887   99999999999999999999999999976543


No 191
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.94  E-value=8.8e-26  Score=195.36  Aligned_cols=143  Identities=27%  Similarity=0.423  Sum_probs=122.6

Q ss_pred             cccccCCcccEEEEEecC-------------CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          157 CKLGEGGFGPVYKGRLLN-------------GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~-------------~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      +.||+|+||.||+|...+             ...|++|.+..........|..|+.++..++||||+++++++..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999997532             2258899887654445567889999999999999999999999999999


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC-------ceEee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN-------PKISD  296 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~-------~ki~D  296 (318)
                      +||||+++|+|+.++..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.       ++++|
T Consensus        81 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             EEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            99999999999988743  2346899999999999999999999987   999999999999987664       89999


Q ss_pred             cccceeec
Q 021046          297 FGMARIFG  304 (318)
Q Consensus       297 fGla~~~~  304 (318)
                      ||++..+.
T Consensus       156 ~g~~~~~~  163 (262)
T cd05077         156 PGIPITVL  163 (262)
T ss_pred             CCCCcccc
Confidence            99997654


No 192
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94  E-value=8.9e-26  Score=198.16  Aligned_cols=150  Identities=32%  Similarity=0.437  Sum_probs=132.9

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46888899999999999999864 58899999886532   234567889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||+++.....
T Consensus        81 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            99999999998843   356889999999999999999999987   999999999999999999999999999876544


No 193
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94  E-value=9.7e-26  Score=197.06  Aligned_cols=148  Identities=28%  Similarity=0.441  Sum_probs=131.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      .|++.+.||+|+||.||++... ++..+++|.+..........+.+|+.++..++|||++++++++..++..++|+||++
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            3577789999999999999875 477889998876555556788999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++|..++..  ....+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++....
T Consensus        86 ~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  154 (282)
T cd06643          86 GGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNT  154 (282)
T ss_pred             CCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccc
Confidence            9999887743  2356899999999999999999999987   9999999999999999999999999997653


No 194
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93  E-value=7.1e-26  Score=200.01  Aligned_cols=153  Identities=31%  Similarity=0.450  Sum_probs=132.0

Q ss_pred             HhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecC
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQG  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~  220 (318)
                      ..++|...+.||+|+||.||++...      .+..||+|+++... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            3467889999999999999999641      24579999887543 23345789999999999 7999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      ..++||||+++|+|..++.... ...+++.+...++.|++.||.|||+++   |+|+||||+||+++.++.++|+|||++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence            9999999999999999885322 234899999999999999999999987   999999999999999999999999999


Q ss_pred             eeecC
Q 021046          301 RIFGG  305 (318)
Q Consensus       301 ~~~~~  305 (318)
                      +.+..
T Consensus       189 ~~~~~  193 (302)
T cd05055         189 RDIMN  193 (302)
T ss_pred             ccccC
Confidence            86643


No 195
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93  E-value=1.4e-25  Score=193.70  Aligned_cols=150  Identities=33%  Similarity=0.512  Sum_probs=130.7

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .++|.+.+.||+|+||.||++...++..+|+|.+.... ...+.+.+|+.++++++|||++++++++. .+..+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM   82 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence            35688889999999999999998777789999886532 34567899999999999999999999875 46689999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++|+|.+++... ....+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.++|+|||+++.+..
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05069          83 GKGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIED  154 (260)
T ss_pred             CCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccC
Confidence            999999988543 2345789999999999999999999887   99999999999999999999999999987654


No 196
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.93  E-value=1.4e-25  Score=193.51  Aligned_cols=143  Identities=33%  Similarity=0.527  Sum_probs=123.1

Q ss_pred             ccccCCcccEEEEEec---CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCC
Q 021046          158 KLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKS  233 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~  233 (318)
                      .||+|+||.||+|.+.   .+..||+|.+..... ...+++.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999763   355799999876433 23467899999999999999999999875 457899999999999


Q ss_pred             hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          234 LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |.+++..  ....+++..+..++.|++.||.|||+++   ++||||||+||+++.++.+||+|||+++.+..+
T Consensus        81 L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  148 (257)
T cd05115          81 LNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCC
Confidence            9998843  2346899999999999999999999987   999999999999999999999999999876543


No 197
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93  E-value=1.2e-25  Score=196.23  Aligned_cols=150  Identities=32%  Similarity=0.509  Sum_probs=128.6

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCc----EEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQ----EVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~----~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      .++|+..+.||+|+||.||+|.+ .++.    .||+|.++... .....++.+|+.++..++||||+++++++.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            46788889999999999999975 3444    48999887542 2335678899999999999999999999875 4578


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++||+++|+|.+++...  ...+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+
T Consensus        85 l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          85 LVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             EEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeec
Confidence            999999999999888432  346899999999999999999999987   999999999999999999999999999877


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       160 ~~  161 (279)
T cd05109         160 DI  161 (279)
T ss_pred             cc
Confidence            53


No 198
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93  E-value=1.4e-27  Score=198.87  Aligned_cols=161  Identities=29%  Similarity=0.492  Sum_probs=140.8

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +.+-|.++++||+|+||.||++.+ .+|+.+|||.+.-  ....+++..|+.++.+.+.|++|+++|.+.....+|+|||
T Consensus        31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME  108 (502)
T KOG0574|consen   31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME  108 (502)
T ss_pred             hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence            345578889999999999999976 4699999999875  4567899999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      ||..|+..+.++.  .+.+|.+.++..+....+.||+|||...   -||||||+-|||++.+|.+||+|||.|-.+.+.-
T Consensus       109 YCGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  109 YCGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM  183 (502)
T ss_pred             hcCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence            9999999999854  4578999999999999999999999865   8999999999999999999999999999887543


Q ss_pred             cccccceeecC
Q 021046          308 LQGNTKRIVGT  318 (318)
Q Consensus       308 ~~~~~~~~~Gt  318 (318)
                      .+.  .+++||
T Consensus       184 AKR--NTVIGT  192 (502)
T KOG0574|consen  184 AKR--NTVIGT  192 (502)
T ss_pred             Hhh--CccccC
Confidence            332  345666


No 199
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93  E-value=5.1e-26  Score=196.03  Aligned_cols=145  Identities=34%  Similarity=0.543  Sum_probs=128.2

Q ss_pred             CccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHH--HHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          153 FSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLT--EFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~--~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      |+..+.||+|+||.||++.... ++.+|+|.+.........  ....|+.++.+++||||+++++++..++..++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            5677899999999999998754 568999999865433222  3456999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ++++|..++.   ....+++..+..++.|+++||.|||+.+   ++|+||||+||++++++.++|+|||.+..+
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             cccccccccc---cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence            9999999985   3466899999999999999999999987   999999999999999999999999999865


No 200
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=3.4e-27  Score=205.48  Aligned_cols=160  Identities=28%  Similarity=0.426  Sum_probs=140.6

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..|...+.||+|.||.||+|.. .+++.||+|.+.-. .....++..+|+.++..+++|||.+++|.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4566778999999999999976 56889999999754 344567899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCcc
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDEL  308 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~~  308 (318)
                      +.+|++.+.+   +....+++....-+..++..||.|||.++   .+|||||+.|||+..+|.+|++|||.|..+..+..
T Consensus        93 ~~gGsv~~lL---~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLL---KSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhh---ccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            9999999888   34455577888888999999999999988   99999999999999999999999999999987765


Q ss_pred             ccccceeecC
Q 021046          309 QGNTKRIVGT  318 (318)
Q Consensus       309 ~~~~~~~~Gt  318 (318)
                      ..  .+++||
T Consensus       167 rr--~tfvGT  174 (467)
T KOG0201|consen  167 RR--KTFVGT  174 (467)
T ss_pred             cc--cccccc
Confidence            43  567887


No 201
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=1.1e-25  Score=198.19  Aligned_cols=150  Identities=25%  Similarity=0.405  Sum_probs=134.2

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ...+|...+.||+|+||.||+|.. .+++.|++|.+........+.+..|+.++..++|||++++++.+..++..++|||
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            346888899999999999999975 4688999999876555556788999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++++|..++.    ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++.....
T Consensus        98 ~~~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654          98 YLAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             ccCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            999999999883    235788999999999999999999987   99999999999999999999999999886543


No 202
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93  E-value=1.1e-25  Score=195.92  Aligned_cols=150  Identities=31%  Similarity=0.459  Sum_probs=131.4

Q ss_pred             cCCccccccccCCcccEEEEEec------CCcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ++|.....||+|+||.||+|+..      +.+.+++|.+...... ...++.+|+.++++++||||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57888899999999999999863      2457999988764433 3567999999999999999999999999989999


Q ss_pred             EEEEeccCCChhhhhhcCCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          224 LIYEYMPNKSLDVFLFYPKKK------RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                      +||||+++|+|.+++......      ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.++++||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence            999999999999998643321      26899999999999999999999987   999999999999999999999999


Q ss_pred             ccceee
Q 021046          298 GMARIF  303 (318)
Q Consensus       298 Gla~~~  303 (318)
                      |+++..
T Consensus       162 ~~~~~~  167 (275)
T cd05046         162 SLSKDV  167 (275)
T ss_pred             cccccc
Confidence            998754


No 203
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.93  E-value=8e-27  Score=191.96  Aligned_cols=162  Identities=31%  Similarity=0.445  Sum_probs=137.4

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC----CCcCH----HHHHHHHHHHhcc-CCCccceEEEEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ----SGQGL----TEFKNEMMLIAKL-QHRHLVRLFGCCI  217 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~----~~~~~----~~~~~e~~~l~~l-~h~niv~l~~~~~  217 (318)
                      ..-..|...+.||+|..+.|-++.. .+|.+.|+|++...    +....    ++-.+|+.+|+++ -||+|+++.+++.
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            3456778888999999999998865 56889999988632    12222    3446789999998 5999999999999


Q ss_pred             ecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          218 EQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       218 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                      .+...++|+|.|+.|.|.++|   .+...++++...+|++|+..|++|||...   ||||||||+|||++++.++||+||
T Consensus        94 s~sF~FlVFdl~prGELFDyL---ts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDF  167 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYL---TSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDF  167 (411)
T ss_pred             CcchhhhhhhhcccchHHHHh---hhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecc
Confidence            999999999999999999999   45678999999999999999999999988   999999999999999999999999


Q ss_pred             ccceeecCCccccccceeecC
Q 021046          298 GMARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       298 Gla~~~~~~~~~~~~~~~~Gt  318 (318)
                      |+|..+.+.+.   .+.++||
T Consensus       168 GFa~~l~~Gek---LrelCGT  185 (411)
T KOG0599|consen  168 GFACQLEPGEK---LRELCGT  185 (411)
T ss_pred             ceeeccCCchh---HHHhcCC
Confidence            99999877653   3345555


No 204
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.93  E-value=1e-25  Score=197.45  Aligned_cols=152  Identities=31%  Similarity=0.518  Sum_probs=132.0

Q ss_pred             hcCCccccccccCCcccEEEEEec------CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCee
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  222 (318)
                      .++|+..+.||+|+||.||++...      ++..||+|.+.... .....++.+|+.++++++|||++++++++..++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            467889999999999999999763      46789999987542 23346789999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 021046          223 ILIYEYMPNKSLDVFLFYPK-------------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASN  283 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~N  283 (318)
                      +++|||+++|+|..++....                   ....+++..++.++.|++.||.|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence            99999999999999985321                   1235788999999999999999999987   9999999999


Q ss_pred             EEEcCCCCceEeecccceeec
Q 021046          284 ILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       284 ill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++.++.++|+|||+++.+.
T Consensus       161 il~~~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIY  181 (288)
T ss_pred             eEecCCCceEECccccceecc
Confidence            999999999999999998654


No 205
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.93  E-value=1.5e-25  Score=196.27  Aligned_cols=149  Identities=30%  Similarity=0.353  Sum_probs=129.1

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      |+..+.||+|+||.||++... +++.+|+|.+.....   .....+..|+.++.+++|+|++.+++.+.+++..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            667789999999999999764 688999998865322   2234577899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|..++... ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.++|+|||++.....
T Consensus        82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05630          82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  154 (285)
T ss_pred             cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence            9999999887432 2345889999999999999999999887   99999999999999999999999999986543


No 206
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93  E-value=1.1e-25  Score=198.34  Aligned_cols=150  Identities=31%  Similarity=0.540  Sum_probs=128.3

Q ss_pred             cCCccccccccCCcccEEEEEecC-C--cEEEEEEccCC-CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLN-G--QEVAVKRLSNQ-SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~-~--~~vavK~l~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ++|++.+.||+|+||.||+|...+ +  ..+++|.++.. .....+.+.+|+.++.++ +||||+++++++...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            468888999999999999998743 3  24788888743 233456789999999999 799999999999999999999


Q ss_pred             EEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCc
Q 021046          226 YEYMPNKSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNP  292 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~  292 (318)
                      +||+++|+|.+++....             ....+++..+..++.|++.||+|||+.+   ++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence            99999999999985422             1235889999999999999999999987   9999999999999999999


Q ss_pred             eEeecccceee
Q 021046          293 KISDFGMARIF  303 (318)
Q Consensus       293 ki~DfGla~~~  303 (318)
                      ||+|||++...
T Consensus       159 kl~dfg~~~~~  169 (297)
T cd05089         159 KIADFGLSRGE  169 (297)
T ss_pred             EECCcCCCccc
Confidence            99999998643


No 207
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.93  E-value=1.7e-25  Score=193.22  Aligned_cols=149  Identities=32%  Similarity=0.499  Sum_probs=131.0

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC-----cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG-----QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ++|...+.||+|+||.||++.. .+++.+|+|.+.....     ...+.+.+|+.++.+++||||+++++++..++..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5688899999999999999976 4688999998764321     224568899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++||||+|+||++++++.++|+|||+++.+.
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            9999999999988742   345788999999999999999999987   9999999999999999999999999998764


Q ss_pred             C
Q 021046          305 G  305 (318)
Q Consensus       305 ~  305 (318)
                      .
T Consensus       156 ~  156 (263)
T cd06625         156 T  156 (263)
T ss_pred             c
Confidence            3


No 208
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.93  E-value=1.3e-25  Score=196.39  Aligned_cols=146  Identities=38%  Similarity=0.563  Sum_probs=126.4

Q ss_pred             CccccccccCCcccEEEEEe-----cCCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeEE
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENIL  224 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l  224 (318)
                      |...+.||+|+||.||++..     .++..||+|.++.... .....+.+|+.++++++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37788999999999988653     3577899999875432 3456788999999999999999999998764  35789


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|||+++|+|.+++..    ..+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence            9999999999998842    35899999999999999999999987   9999999999999999999999999998765


Q ss_pred             C
Q 021046          305 G  305 (318)
Q Consensus       305 ~  305 (318)
                      .
T Consensus       159 ~  159 (283)
T cd05080         159 E  159 (283)
T ss_pred             C
Confidence            4


No 209
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93  E-value=1.6e-25  Score=192.68  Aligned_cols=149  Identities=32%  Similarity=0.469  Sum_probs=131.1

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-----CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-----GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      +|...+.||+|+||.||+|... ++..|++|.+....     .+..+.+.+|+.+++.++|||++++++++..++..+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667789999999999999875 78899999886532     22446789999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            999999999998842   345889999999999999999999987   99999999999999999999999999987654


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       155 ~  155 (258)
T cd06632         155 F  155 (258)
T ss_pred             c
Confidence            3


No 210
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=1.1e-25  Score=201.55  Aligned_cols=154  Identities=30%  Similarity=0.511  Sum_probs=131.5

Q ss_pred             HhcCCccccccccCCcccEEEEEecC--------CcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIE  218 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~--------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~  218 (318)
                      ...+|.+.+.||+|+||.||++....        +..||+|.+.... .....++.+|+.++.++ +||||+++++++..
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            34568889999999999999997421        2368999887532 33456889999999999 79999999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL  285 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nil  285 (318)
                      ++..++++||+++|+|.+++....             ....+++.++..++.|++.||.|||+.+   ++||||||+||+
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil  166 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVL  166 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEE
Confidence            999999999999999999885421             2245888999999999999999999987   999999999999


Q ss_pred             EcCCCCceEeecccceeecC
Q 021046          286 LDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       286 l~~~~~~ki~DfGla~~~~~  305 (318)
                      ++.++.+||+|||+++.+..
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~  186 (334)
T cd05100         167 VTEDNVMKIADFGLARDVHN  186 (334)
T ss_pred             EcCCCcEEECCcccceeccc
Confidence            99999999999999987643


No 211
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.93  E-value=2.5e-25  Score=192.58  Aligned_cols=152  Identities=26%  Similarity=0.446  Sum_probs=134.2

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...+.||+|+||.||+|... +++.||+|.++..   .......+.+|+.++++++|+|++++++++..++..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888999999999999999875 7899999988632   2233567899999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++|+|..++... .....+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||+++.+..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            999999999887542 23456899999999999999999999987   99999999999999999999999999987643


No 212
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.93  E-value=1.5e-25  Score=194.24  Aligned_cols=151  Identities=32%  Similarity=0.565  Sum_probs=131.7

Q ss_pred             hcCCccccccccCCcccEEEEEecC-C---cEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-G---QEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~---~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      .++|+..+.||+|+||.||+|.... +   ..+|+|.+.... ....+++..|+.++..++|||++++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            3577888999999999999998742 3   379999887542 2335678999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||+++++|..++..  ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||++....
T Consensus        84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          84 ITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             EEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence            9999999999998843  2356899999999999999999999987   9999999999999999999999999998765


Q ss_pred             C
Q 021046          305 G  305 (318)
Q Consensus       305 ~  305 (318)
                      .
T Consensus       159 ~  159 (268)
T cd05063         159 D  159 (268)
T ss_pred             c
Confidence            4


No 213
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=1.2e-25  Score=199.61  Aligned_cols=153  Identities=32%  Similarity=0.525  Sum_probs=131.3

Q ss_pred             HhcCCccccccccCCcccEEEEEec--------CCcEEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL--------NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIE  218 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~  218 (318)
                      ..++|.+.+.||+|+||.||+++..        ....+|+|.++... .....++..|+.++.++ +||||+++++++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            3467888999999999999999742        24568999887532 23456788999999999 69999999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL  285 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nil  285 (318)
                      ++..+++|||+++|+|..++....             ....+++.+...++.|++.||.|||+.+   ++||||||+||+
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil  166 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVL  166 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEE
Confidence            999999999999999999985422             1245889999999999999999999887   999999999999


Q ss_pred             EcCCCCceEeecccceeec
Q 021046          286 LDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       286 l~~~~~~ki~DfGla~~~~  304 (318)
                      ++.++.+||+|||+++.+.
T Consensus       167 l~~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         167 VTEDNVMKIADFGLARGVH  185 (314)
T ss_pred             EcCCCcEEEcccccccccc
Confidence            9999999999999998664


No 214
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93  E-value=2.7e-25  Score=191.33  Aligned_cols=151  Identities=24%  Similarity=0.386  Sum_probs=133.1

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|+..+.||+|+||.||.++. .+++.+++|.+...  ......++.+|+.++++++||||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            578889999999999999975 45889999987643  334556789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++|+|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            99999999885432 456889999999999999999999887   999999999999999999999999999877543


No 215
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.93  E-value=2.5e-25  Score=191.63  Aligned_cols=147  Identities=39%  Similarity=0.599  Sum_probs=130.4

Q ss_pred             cccccCCcccEEEEEecC----CcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||++....    +..+++|.+...... ..+.+..|+..+..++|||++++++++..+...++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            469999999999998754    778999999765433 367899999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          232 KSLDVFLFYPKK------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       232 g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++|.+++.....      ...+++..+..++.|++.||+|||+++   ++|+||+|+||++++++.+||+|||++..+..
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999854321      367899999999999999999999987   99999999999999999999999999988765


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       158 ~  158 (262)
T cd00192         158 D  158 (262)
T ss_pred             c
Confidence            3


No 216
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93  E-value=1.4e-25  Score=194.45  Aligned_cols=155  Identities=29%  Similarity=0.443  Sum_probs=131.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ..++++.....||+|+||.||+|... ++..|++|.+........+.+.+|+.+++.++||||+++++++..++..++|+
T Consensus         5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   84 (268)
T cd06624           5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM   84 (268)
T ss_pred             cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence            34555666678999999999999864 57789999887665556678999999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~~~  305 (318)
                      ||+++++|..++.........++..+..++.|++.||+|||+.+   |+||||||+||+++. ++.++|+|||++..+..
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  161 (268)
T cd06624          85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG  161 (268)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence            99999999998854322112277888899999999999999887   999999999999976 67999999999986643


No 217
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93  E-value=1.6e-25  Score=194.41  Aligned_cols=152  Identities=30%  Similarity=0.481  Sum_probs=131.5

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEec------C
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ------G  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~  220 (318)
                      +.+.|+..+.||+|+||.||+|... +++.||+|.+... ......+..|+.++.++ +|||++++++++...      .
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            5677888899999999999999864 5788999998653 34456788999999998 699999999998763      4


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      ..+++|||+++|+|.+++... ....+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+||+|||++
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence            579999999999999988542 2356889999999999999999999987   999999999999999999999999999


Q ss_pred             eeecC
Q 021046          301 RIFGG  305 (318)
Q Consensus       301 ~~~~~  305 (318)
                      +.+..
T Consensus       159 ~~~~~  163 (272)
T cd06637         159 AQLDR  163 (272)
T ss_pred             eeccc
Confidence            87643


No 218
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93  E-value=1.9e-25  Score=197.17  Aligned_cols=149  Identities=29%  Similarity=0.444  Sum_probs=129.5

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|...+.||+|+||.||+|... +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            357889999999999999999764 57899999886432 2334567889999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |++ ++|..++..  ....+++.....++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||+++...
T Consensus        85 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          85 YLD-KDLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             ccc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            997 588877743  2346789999999999999999999987   9999999999999999999999999997654


No 219
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93  E-value=1.9e-25  Score=194.79  Aligned_cols=153  Identities=32%  Similarity=0.491  Sum_probs=131.2

Q ss_pred             HhcCCccccccccCCcccEEEEEecC------CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  221 (318)
                      ..++|.+.+.||+|+||.||+|.+.+      +..||+|.+.... ......|..|+.+++.++||||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            35678899999999999999998753      5678999886543 2334578999999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC---CceE
Q 021046          222 NILIYEYMPNKSLDVFLFYPKK----KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM---NPKI  294 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~---~~ki  294 (318)
                      .++||||+++++|.+++.....    ...+++..+..++.||+.||.|||+.+   ++||||||+||+++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence            9999999999999998854321    236899999999999999999999987   99999999999998765   5999


Q ss_pred             eecccceeec
Q 021046          295 SDFGMARIFG  304 (318)
Q Consensus       295 ~DfGla~~~~  304 (318)
                      +|||+++.+.
T Consensus       161 ~dfg~~~~~~  170 (277)
T cd05036         161 ADFGMARDIY  170 (277)
T ss_pred             ccCccccccC
Confidence            9999998764


No 220
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.93  E-value=2.3e-25  Score=192.05  Aligned_cols=142  Identities=32%  Similarity=0.522  Sum_probs=123.2

Q ss_pred             ccccCCcccEEEEEe---cCCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          158 KLGEGGFGPVYKGRL---LNGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      .||+|+||.||+|.+   .++..+|+|+++....  ...+++..|+.+++.++||||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999965   3577899999875432  23567899999999999999999999875 45678999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +|.+++..   ...+++..+..++.|++.||+|||+++   ++||||||+||+++.++.+||+|||+++.+..+
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~  148 (257)
T cd05116          81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence            99998843   346889999999999999999999987   999999999999999999999999999877543


No 221
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.93  E-value=2.4e-25  Score=191.41  Aligned_cols=151  Identities=29%  Similarity=0.452  Sum_probs=133.1

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|...+.||+|+||.||++... +++.|++|.+...  ......++.+|+.+++.++|||++++++++.+++..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4677889999999999999874 5889999988643  234456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|.+++... ....+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||+++.+...
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            9999999988543 2456889999999999999999999887   999999999999999999999999999877543


No 222
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93  E-value=2.1e-25  Score=194.67  Aligned_cols=150  Identities=33%  Similarity=0.563  Sum_probs=129.8

Q ss_pred             hcCCccccccccCCcccEEEEEecC-Cc----EEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-GQ----EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ..+|...+.||+|+||.||+|.... +.    .+|+|.+..... ....++.+|+.++++++|||++++++++.. ...+
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   84 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ   84 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence            3578888999999999999998643 32    589998875433 334678899999999999999999999987 7889


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||+++|+|.+++...  ...+++.....++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+
T Consensus        85 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~  159 (279)
T cd05057          85 LITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (279)
T ss_pred             EEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccc
Confidence            999999999999988532  345899999999999999999999977   999999999999999999999999999876


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       160 ~~  161 (279)
T cd05057         160 DV  161 (279)
T ss_pred             cC
Confidence            53


No 223
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.93  E-value=2e-25  Score=196.49  Aligned_cols=149  Identities=31%  Similarity=0.454  Sum_probs=130.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCc-----CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ-----GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      +|...+.||+|+||.||+|... +++.||||.+......     ....+..|+.++++++||||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4777889999999999999864 5889999998754322     234567899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+ +|+|..++...  ...+++..+..++.|+++||.|||+.+   ++|+||+|+||+++.++.++|+|||+++.+..
T Consensus        81 ~e~~-~~~L~~~i~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDK--SIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 99999988432  236899999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       155 ~  155 (298)
T cd07841         155 P  155 (298)
T ss_pred             C
Confidence            3


No 224
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=1.5e-25  Score=197.36  Aligned_cols=150  Identities=25%  Similarity=0.430  Sum_probs=134.7

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..+|+..+.||.|+||.||+|.. .+++.|++|.+........+.+.+|+..++.++|||++++++++...+..++|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            35789999999999999999975 56889999998765555567889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|..++.    ...+++.++..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++..+..+
T Consensus        98 ~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          98 LAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             cCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence            99999999873    235899999999999999999999987   999999999999999999999999999876543


No 225
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.93  E-value=2.9e-25  Score=192.31  Aligned_cols=148  Identities=32%  Similarity=0.524  Sum_probs=129.5

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCc---------CHHHHHHHHHHHhccCCCccceEEEEEEecCe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQ---------GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  221 (318)
                      +|.....||+|+||.||+|.. .+++.+|+|.+......         ..+.+.+|+.++..++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            366778999999999999976 45789999988654322         12468889999999999999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      .+++|||+++++|..++.   ....+++..+..++.|++.||.|||+.+   ++||||+|+||++++++.++|+|||+++
T Consensus        81 ~~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          81 LNIFLEYVPGGSVAALLN---NYGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             cEEEEEecCCCCHHHHHH---hccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence            999999999999999883   3356888999999999999999999987   9999999999999999999999999998


Q ss_pred             eecC
Q 021046          302 IFGG  305 (318)
Q Consensus       302 ~~~~  305 (318)
                      .+..
T Consensus       155 ~~~~  158 (267)
T cd06628         155 KLEA  158 (267)
T ss_pred             cccc
Confidence            7753


No 226
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93  E-value=2.3e-25  Score=192.23  Aligned_cols=151  Identities=28%  Similarity=0.499  Sum_probs=135.2

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      .++|+..+.||+|+||.||++... +++.+++|.+........+.+.+|+.++++++|||++++++++...+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            367888999999999999999864 5778999998866555678899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|..++...  ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++..+..
T Consensus        82 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  153 (262)
T cd06613          82 CGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTA  153 (262)
T ss_pred             CCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhh
Confidence            9999999987432  256889999999999999999999987   99999999999999999999999999976543


No 227
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.93  E-value=2e-25  Score=192.79  Aligned_cols=151  Identities=31%  Similarity=0.466  Sum_probs=133.0

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..++|...++||+|+||.||++...++..+|+|.+... ....+.+.+|+.+++.++|+|++++++.+.. ...+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            45678899999999999999999877788999988753 2345678999999999999999999999887 778999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|+|.+++... ....+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++..+..
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073          82 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             CCCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence            9999999998543 2456788999999999999999999877   99999999999999999999999999987654


No 228
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.93  E-value=1.2e-25  Score=202.17  Aligned_cols=150  Identities=28%  Similarity=0.395  Sum_probs=127.7

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEec-----
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ-----  219 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----  219 (318)
                      ...++|...+.||+|+||.||++.. .+++.||||++....  ......+.+|+.++..++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            3457899999999999999999976 467899999987532  22345678899999999999999999988643     


Q ss_pred             -CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          220 -GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       220 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                       ...++++|++ +++|..++.    ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg  163 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG  163 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence             3468999987 778887762    346899999999999999999999987   9999999999999999999999999


Q ss_pred             cceeecC
Q 021046          299 MARIFGG  305 (318)
Q Consensus       299 la~~~~~  305 (318)
                      +++....
T Consensus       164 ~~~~~~~  170 (343)
T cd07878         164 LARQADD  170 (343)
T ss_pred             cceecCC
Confidence            9987654


No 229
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93  E-value=1.6e-26  Score=211.04  Aligned_cols=154  Identities=36%  Similarity=0.522  Sum_probs=135.7

Q ss_pred             HhcCCccccccccCCcccEEEEEec--CCc--EEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL--NGQ--EVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~--~~~--~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ..+.....++||+|.||.|++|.|.  +|+  .||||.++..... ..++|++|+..|.+|+|||+++|||+..+ ....
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m  186 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM  186 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence            3445666789999999999999874  344  6899999876544 67899999999999999999999999888 6889


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||+|.++.|+|.+.|+. .....|-......++.|||.||.||.+++   +|||||.++|+|+.....+||+||||.|-+
T Consensus       187 MV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaL  262 (1039)
T KOG0199|consen  187 MVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRAL  262 (1039)
T ss_pred             HHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceecc
Confidence            99999999999999976 34566778888999999999999999987   999999999999999999999999999999


Q ss_pred             cCCc
Q 021046          304 GGDE  307 (318)
Q Consensus       304 ~~~~  307 (318)
                      +.++
T Consensus       263 g~ne  266 (1039)
T KOG0199|consen  263 GENE  266 (1039)
T ss_pred             CCCC
Confidence            8654


No 230
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93  E-value=2.2e-25  Score=191.99  Aligned_cols=144  Identities=35%  Similarity=0.467  Sum_probs=127.0

Q ss_pred             cccccCCcccEEEEEecC--C--cEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLLN--G--QEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~--~--~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|.+.+  +  ..||||.+..... ...+.+..|+.++++++||||+++++.+.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998643  3  3699999987655 456789999999999999999999999988 889999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+|..++..... ..+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccc
Confidence            999998854322 56899999999999999999999987   99999999999999999999999999987754


No 231
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.93  E-value=2.5e-25  Score=201.23  Aligned_cols=147  Identities=29%  Similarity=0.395  Sum_probs=125.0

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----  220 (318)
                      ..++|...+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.++..++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457899999999999999999976 45889999998643  2234567889999999999999999999987543     


Q ss_pred             -eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          221 -ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       221 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                       ..++||||++++ |...+.     ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~~-l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876          99 QDVYLVMELMDAN-LCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ceeEEEEeCCCcC-HHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence             469999999764 544442     24788888999999999999999987   99999999999999999999999999


Q ss_pred             ceeec
Q 021046          300 ARIFG  304 (318)
Q Consensus       300 a~~~~  304 (318)
                      |+...
T Consensus       170 a~~~~  174 (359)
T cd07876         170 ARTAC  174 (359)
T ss_pred             ccccc
Confidence            98654


No 232
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.93  E-value=1.3e-25  Score=194.55  Aligned_cols=152  Identities=25%  Similarity=0.456  Sum_probs=133.0

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...+.||+|+||.||++.. .++..++||.+....   .....++.+|+.+++.++||||+++++++..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4678889999999999999985 578899999876432   223457889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++++|.+++... .....+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            999999999987532 23456899999999999999999999987   99999999999999999999999999987643


No 233
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.93  E-value=3e-25  Score=197.27  Aligned_cols=144  Identities=28%  Similarity=0.493  Sum_probs=118.9

Q ss_pred             ccccccCCcccEEEEEec---CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEe--cCeeEEEEEecc
Q 021046          156 QCKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE--QGENILIYEYMP  230 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~  230 (318)
                      .++||+|+||.||+|...   +++.+|+|.+....  ....+.+|+.++.+++||||+++++++..  +...+++|||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999864   46789999986532  23467889999999999999999999865  456789999986


Q ss_pred             CCChhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE----cCCCCceEeecccc
Q 021046          231 NKSLDVFLFYPK------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----DSDMNPKISDFGMA  300 (318)
Q Consensus       231 ~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill----~~~~~~ki~DfGla  300 (318)
                      + +|..++....      ....+++..+..++.|++.||.|||+++   |+||||||+|||+    +.++.+||+|||+|
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            5 7766654221      2235889999999999999999999987   9999999999999    45678999999999


Q ss_pred             eeecC
Q 021046          301 RIFGG  305 (318)
Q Consensus       301 ~~~~~  305 (318)
                      +.+..
T Consensus       160 ~~~~~  164 (317)
T cd07868         160 RLFNS  164 (317)
T ss_pred             eccCC
Confidence            87754


No 234
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93  E-value=1.8e-25  Score=199.05  Aligned_cols=141  Identities=22%  Similarity=0.300  Sum_probs=114.2

Q ss_pred             HhcCCccccccccCCcccEEEEEec--CCcEEEEEEccCCC-----CcCHHHHHHHHHHHhccCCCccce-EEEEEEecC
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL--NGQEVAVKRLSNQS-----GQGLTEFKNEMMLIAKLQHRHLVR-LFGCCIEQG  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~l~~~~-----~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~  220 (318)
                      ..++|...+.||+|+||+||+|.+.  +++.+|||++....     ......|.+|+.+|.+++|+|+++ +++    .+
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~   91 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TG   91 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cC
Confidence            4578999999999999999999764  57778999875321     122456899999999999999985 443    24


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEEcCCCCceEeeccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDL-KASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl-k~~Nill~~~~~~ki~DfGl  299 (318)
                      ..++||||+++++|....    ..   .   ...++.|++++|.|||+.+   |+|||| ||+|||++.++.+||+|||+
T Consensus        92 ~~~LVmE~~~G~~L~~~~----~~---~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGl  158 (365)
T PRK09188         92 KDGLVRGWTEGVPLHLAR----PH---G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQL  158 (365)
T ss_pred             CcEEEEEccCCCCHHHhC----cc---c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECcc
Confidence            679999999999996321    11   1   1357889999999999987   999999 99999999999999999999


Q ss_pred             ceeecCC
Q 021046          300 ARIFGGD  306 (318)
Q Consensus       300 a~~~~~~  306 (318)
                      |+.+...
T Consensus       159 A~~~~~~  165 (365)
T PRK09188        159 ASVFRRR  165 (365)
T ss_pred             ceecccC
Confidence            9987543


No 235
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.93  E-value=2.4e-25  Score=192.70  Aligned_cols=146  Identities=28%  Similarity=0.508  Sum_probs=129.3

Q ss_pred             CCccccccccCCcccEEEEEecCCcEEEEEEccCCCC------cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG------QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      +|...+.||+|+||.||+|...+++.+|+|.+.....      .....+.+|+..++.++|+||+++++++.+.+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            4677889999999999999888889999998864321      1234588899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   |+|+||+|+||++++++.++|+|||++...
T Consensus        81 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          81 MEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            999999999999843   345788999999999999999999887   999999999999999999999999999765


No 236
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93  E-value=2.2e-25  Score=197.09  Aligned_cols=146  Identities=26%  Similarity=0.400  Sum_probs=129.5

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|+..+.||+|+||.||++... +++.|++|.+....   ......+.+|+.++..++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            36888899999999999999864 47899999887542   233457889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ||+++++|..++..   ...+++.....++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++.
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            99999999999843   346889999999999999999999987   99999999999999999999999999874


No 237
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93  E-value=2.7e-25  Score=193.08  Aligned_cols=147  Identities=29%  Similarity=0.427  Sum_probs=127.9

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC--c--------CHHHHHHHHHHHhccCCCccceEEEEEEecC
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--Q--------GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG  220 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~  220 (318)
                      +|...+.||+|+||.||+|.. .+++.+|+|.++....  .        ..+.+..|+.++..++|||++++++++..++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            466778999999999999975 4688999998753211  1        1246788999999999999999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      ..++||||+++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++||||+|+||+++.++.++|+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence            99999999999999998843   356889999999999999999999987   999999999999999999999999999


Q ss_pred             eeec
Q 021046          301 RIFG  304 (318)
Q Consensus       301 ~~~~  304 (318)
                      +...
T Consensus       156 ~~~~  159 (272)
T cd06629         156 KKSD  159 (272)
T ss_pred             cccc
Confidence            8654


No 238
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.93  E-value=2.7e-25  Score=194.13  Aligned_cols=149  Identities=34%  Similarity=0.531  Sum_probs=130.8

Q ss_pred             cCCccccccccCCcccEEEEEec-----CCcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEe--cCee
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIE--QGEN  222 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~  222 (318)
                      ++|...+.||+|+||.||++.+.     ++..+|||.+...... ....|.+|+..++.++||||+++++++..  +...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            45777789999999999999853     3678999999764432 46789999999999999999999999987  5578


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      +++|||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++..
T Consensus        84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            9999999999999998532  235899999999999999999999987   99999999999999999999999999987


Q ss_pred             ec
Q 021046          303 FG  304 (318)
Q Consensus       303 ~~  304 (318)
                      +.
T Consensus       159 ~~  160 (284)
T cd05038         159 LP  160 (284)
T ss_pred             cc
Confidence            76


No 239
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93  E-value=3.7e-25  Score=190.43  Aligned_cols=149  Identities=30%  Similarity=0.536  Sum_probs=132.2

Q ss_pred             cCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      .+|+..+.||+|+||.||++.+.++..+|+|.+... .....++..|+.++..++|||++++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            467788999999999999998877889999988753 2345679999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|.+++...  ...+++..+..++.|++.|++|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  152 (256)
T cd05112          83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLD  152 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeeccc
Confidence            99999888432  345789999999999999999999887   99999999999999999999999999986643


No 240
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.93  E-value=1.3e-26  Score=193.79  Aligned_cols=154  Identities=29%  Similarity=0.485  Sum_probs=128.3

Q ss_pred             HhcCCccccccccCCcccEEEEEecC-----CcEEEEEEccCCCC-cCH-HHHHHHHHHHhccCCCccceEEEEEEe-cC
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQSG-QGL-TEFKNEMMLIAKLQHRHLVRLFGCCIE-QG  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~-~~~-~~~~~e~~~l~~l~h~niv~l~~~~~~-~~  220 (318)
                      ....|+....||+|+||.||+|.-.+     ...+|||+++.... .+. ...-+|+.+++.++|||++.|..++.. +.
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            44578888999999999999995422     23689999975422 222 346789999999999999999999987 78


Q ss_pred             eeEEEEEeccCCChhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC----CCceE
Q 021046          221 ENILIYEYMPNKSLDVFLFYP--KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD----MNPKI  294 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~----~~~ki  294 (318)
                      ..+|++||.+. +|...++..  ...+.++......|..||+.|+.|||++-   |+||||||.||||..+    |.+||
T Consensus       102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen  102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEe
Confidence            89999999987 676666543  23567889999999999999999999987   9999999999999877    89999


Q ss_pred             eecccceeecCC
Q 021046          295 SDFGMARIFGGD  306 (318)
Q Consensus       295 ~DfGla~~~~~~  306 (318)
                      +|||+||++.+.
T Consensus       178 aDlGlaR~~~~p  189 (438)
T KOG0666|consen  178 ADLGLARLFNNP  189 (438)
T ss_pred             ecccHHHHhhcc
Confidence            999999998754


No 241
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.93  E-value=7.1e-25  Score=188.65  Aligned_cols=150  Identities=23%  Similarity=0.407  Sum_probs=131.7

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      +|++.+.||+|+||.||++... +++.+|+|.++.. .....+.+..|+.+++.++|||++++++.+..++..+++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4778899999999999999764 5889999988643 2334567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++|+|..++... ....+++.....++.|++.||.|||+.+   |+|+||||+||++++++.++|+|||+++.+..
T Consensus        81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219          81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence            999998877432 3445788999999999999999999987   99999999999999999999999999987754


No 242
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.93  E-value=2.4e-25  Score=192.79  Aligned_cols=148  Identities=31%  Similarity=0.468  Sum_probs=127.3

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC-----CcCHHHHHHHHHHHhccCCCccceEEEEEEec--Cee
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-----GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~  222 (318)
                      .+|...+.||+|+||.||.+.. .++..||+|.+....     ....+.+.+|+.++.+++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4788899999999999999986 458899999875321     12245788899999999999999999998764  467


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      +++|||+++++|.+++..   ...+++.....++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence            899999999999998842   245788889999999999999999987   99999999999999999999999999986


Q ss_pred             ec
Q 021046          303 FG  304 (318)
Q Consensus       303 ~~  304 (318)
                      +.
T Consensus       156 ~~  157 (265)
T cd06652         156 LQ  157 (265)
T ss_pred             cc
Confidence            54


No 243
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93  E-value=1.5e-25  Score=195.97  Aligned_cols=149  Identities=28%  Similarity=0.429  Sum_probs=130.9

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|+..+.||+|+||.||+|... +++.||+|++.....  ...+.+.+|+.++..++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46888899999999999999875 588999998865322  234578899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++++|..+...   ...+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++..+..
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            9999999877632   335899999999999999999999987   99999999999999999999999999987644


No 244
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93  E-value=5e-25  Score=189.09  Aligned_cols=143  Identities=35%  Similarity=0.506  Sum_probs=127.8

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChh
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLD  235 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~  235 (318)
                      ++||+|+||.||++...+++.||+|.+...... ....+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            469999999999998877899999988764333 4567899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          236 VFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       236 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++...  ...+++.....++.+++.||.|||+++   ++||||+|+||+++.++.+||+|||+++...
T Consensus        81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            988432  335788999999999999999999887   9999999999999999999999999998664


No 245
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.93  E-value=2.1e-27  Score=192.52  Aligned_cols=151  Identities=28%  Similarity=0.430  Sum_probs=130.1

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccC--CCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ..+.|++-+.||+|.|+.||+... ++|+.+|+|.+.-  -+..+.+++.+|+.+-..|+||||++|.....+....+||
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            356788889999999999999954 6789999887753  2445778899999999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC---CceEeeccccee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM---NPKISDFGMARI  302 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~---~~ki~DfGla~~  302 (318)
                      +|+|.|++|..-+..   ...+++..+-..+.||+++|.|+|.++   |||||+||.|+|+.+..   -+||+|||+|..
T Consensus        89 Fe~m~G~dl~~eIV~---R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVA---REFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             EecccchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEE
Confidence            999999999655422   255677888899999999999999988   99999999999996543   489999999999


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      +++
T Consensus       163 l~~  165 (355)
T KOG0033|consen  163 VND  165 (355)
T ss_pred             eCC
Confidence            984


No 246
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.93  E-value=3e-25  Score=194.26  Aligned_cols=158  Identities=25%  Similarity=0.348  Sum_probs=133.1

Q ss_pred             HHHHHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEE----
Q 021046          144 ASVSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCI----  217 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~----  217 (318)
                      ..+....++|+..+.||+|+||.||++.. .+++.+|+|.+... .....++.+|+.++.++ +|||++++++++.    
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   89 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV   89 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence            33445778999999999999999999976 45789999988653 22345688899999999 6999999999885    


Q ss_pred             -ecCeeEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEe
Q 021046          218 -EQGENILIYEYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       218 -~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                       .++..++||||+++++|..++... .....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEc
Confidence             345689999999999999877532 23456888999999999999999999887   9999999999999999999999


Q ss_pred             ecccceeecC
Q 021046          296 DFGMARIFGG  305 (318)
Q Consensus       296 DfGla~~~~~  305 (318)
                      |||+++.+..
T Consensus       167 dfg~~~~~~~  176 (286)
T cd06638         167 DFGVSAQLTS  176 (286)
T ss_pred             cCCceeeccc
Confidence            9999987653


No 247
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93  E-value=5.9e-25  Score=190.93  Aligned_cols=143  Identities=35%  Similarity=0.592  Sum_probs=122.8

Q ss_pred             cccccCCcccEEEEEecC-Cc--EEEEEEccCCC-CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLLN-GQ--EVAVKRLSNQS-GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~-~~--~vavK~l~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|...+ +.  .+++|.++... ......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999998754 33  47888887532 33456788999999999 799999999999999999999999999


Q ss_pred             CChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          232 KSLDVFLFYPK-------------KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       232 g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      |+|.+++....             ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence            99999885321             1235789999999999999999999887   9999999999999999999999999


Q ss_pred             ccee
Q 021046          299 MARI  302 (318)
Q Consensus       299 la~~  302 (318)
                      +++.
T Consensus       158 l~~~  161 (270)
T cd05047         158 LSRG  161 (270)
T ss_pred             Cccc
Confidence            9863


No 248
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93  E-value=3.2e-25  Score=192.48  Aligned_cols=151  Identities=28%  Similarity=0.457  Sum_probs=129.3

Q ss_pred             hcCCccccccccCCcccEEEEEecC----CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      .++|...+.||+|+||.||+|...+    ...|+||...... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            3567888999999999999997643    2468999887644 3445679999999999999999999998875 56789


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||+++|+|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+.
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056          84 VMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             EEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecc
Confidence            99999999999998432  345899999999999999999999887   9999999999999999999999999998765


Q ss_pred             CC
Q 021046          305 GD  306 (318)
Q Consensus       305 ~~  306 (318)
                      ..
T Consensus       159 ~~  160 (270)
T cd05056         159 DE  160 (270)
T ss_pred             cc
Confidence            43


No 249
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.93  E-value=3.7e-25  Score=195.51  Aligned_cols=150  Identities=37%  Similarity=0.654  Sum_probs=126.9

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCc----EEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQ----EVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      .++|+..+.||+|+||.||+|.+. ++.    .||+|.+..... ....++.+|+.+++.++||||+++++++... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            456788899999999999999763 343    478888875432 2234688999999999999999999998754 567


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++||+++|+|.+++..  ....+++..+..++.|++.||.|||+++   |+||||||+||++++++.+||+|||+++.+
T Consensus        85 ~v~e~~~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          85 LVTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             eeehhcCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence            99999999999998843  2346889999999999999999999987   999999999999999999999999999876


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       160 ~~  161 (303)
T cd05110         160 EG  161 (303)
T ss_pred             cC
Confidence            54


No 250
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93  E-value=7.3e-25  Score=188.75  Aligned_cols=149  Identities=30%  Similarity=0.517  Sum_probs=129.1

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEe-cCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE-QGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~  228 (318)
                      .++|...+.||+|+||.||++... +..+|+|.++..  ...+.+.+|+.++++++|||++++++++.. ++..++++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            357888899999999999999774 678999988653  335678999999999999999999998654 4578999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++... ....+++..+..++.|++.||+|||+++   ++||||||+||++++++.+||+|||+++....
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  154 (256)
T cd05082          82 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             CCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccc
Confidence            9999999988532 2345889999999999999999999987   99999999999999999999999999986543


No 251
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.93  E-value=7.1e-25  Score=194.73  Aligned_cols=150  Identities=27%  Similarity=0.349  Sum_probs=132.6

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCc---CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ---GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++|...+.||+|+||.||++... +++.+|+|.+......   ....+..|+.++..++||||+++++.+...+..++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36888899999999999999875 4889999998764322   4457889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++++|.+++... ....+++.....++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++....
T Consensus        81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            999999999987532 3456899999999999999999999987   9999999999999999999999999997664


No 252
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.93  E-value=4.6e-25  Score=193.56  Aligned_cols=148  Identities=30%  Similarity=0.450  Sum_probs=128.7

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            367888999999999999999875 678999999865322 223456789999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+++ +|..++...  ...+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++..
T Consensus        84 ~~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          84 YLDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             cCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECcccccccc
Confidence            9985 888877432  346789999999999999999999987   999999999999999999999999998754


No 253
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.93  E-value=7e-25  Score=191.74  Aligned_cols=149  Identities=30%  Similarity=0.474  Sum_probs=132.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|++.+.||+|+||.||+|... ++..||+|++....  ......+.+|+.++++++|||++++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4778899999999999999864 68899999987543  33356789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      + +++|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++..+...
T Consensus        81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            9 99999887533  356899999999999999999999987   999999999999999999999999999877543


No 254
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93  E-value=5.5e-25  Score=190.09  Aligned_cols=148  Identities=31%  Similarity=0.506  Sum_probs=132.4

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCc--CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQ--GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|...+.||+|+||.||++... +++.+++|.++.....  ..+.+..|+.++++++||||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4778899999999999999864 6889999998765443  567899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++..+..
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~  151 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence            999999998843   345788999999999999999999987   99999999999999999999999999987754


No 255
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.93  E-value=2.7e-25  Score=200.76  Aligned_cols=149  Identities=28%  Similarity=0.390  Sum_probs=125.7

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC----
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG----  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----  220 (318)
                      ...++|...+.||+|+||.||++.. ..++.||||++....  ......+.+|+.+++.++||||+++++++....    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3467899999999999999999976 457899999987532  233457788999999999999999999986543    


Q ss_pred             --eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          221 --ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       221 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                        ..++||||+++ +|...+.     ..+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg  164 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG  164 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence              46999999976 5555552     24788889999999999999999987   9999999999999999999999999


Q ss_pred             cceeecC
Q 021046          299 MARIFGG  305 (318)
Q Consensus       299 la~~~~~  305 (318)
                      +|+....
T Consensus       165 ~~~~~~~  171 (355)
T cd07874         165 LARTAGT  171 (355)
T ss_pred             ccccCCC
Confidence            9987643


No 256
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.93  E-value=2.7e-25  Score=193.74  Aligned_cols=148  Identities=29%  Similarity=0.452  Sum_probs=130.2

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +.|+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            34667788999999999999764 57889999887432 23456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++.    ...+++..+..++.|++.|+.|||+.+   ++|+||+|+||++++++.++|+|||+++.+..
T Consensus        84 ~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06642          84 LGGGSALDLLK----PGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             cCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccC
Confidence            99999998873    346889999999999999999999887   99999999999999999999999999987654


No 257
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.93  E-value=5.8e-25  Score=189.07  Aligned_cols=149  Identities=30%  Similarity=0.484  Sum_probs=134.2

Q ss_pred             hcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      .++|+..+.||+|+||.||++...+ ++.+++|.+.....  .+++.+|+.++++++|||++++++++..+...++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3678889999999999999998754 78999999875432  67899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++..  ....+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||++..+..
T Consensus        80 ~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          80 CGAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            999999998843  2457899999999999999999999987   99999999999999999999999999987654


No 258
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93  E-value=9.1e-25  Score=187.88  Aligned_cols=149  Identities=38%  Similarity=0.594  Sum_probs=130.3

Q ss_pred             ccccccccCCcccEEEEEecC-----CcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          154 STQCKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .+.+.||+|+||.||++...+     +..||+|.+...... ....+..|+..+..++||||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999998754     378999999765433 56789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+++++|.+++..... ..+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.++|+|||+++.....
T Consensus        82 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       82 YMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             ccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence            9999999998853221 12899999999999999999999987   999999999999999999999999999877543


No 259
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93  E-value=6e-25  Score=192.83  Aligned_cols=148  Identities=28%  Similarity=0.352  Sum_probs=129.4

Q ss_pred             CCccccccccCCcccEEEEEe----cCCcEEEEEEccCCC----CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCee
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~  222 (318)
                      +|+..+.||+|+||.||++..    .+|..||+|.++...    ....+.+.+|+.++.++ +||||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999976    368899999987532    22345688899999999 599999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++||||+|+||+++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            999999999999998843   346788999999999999999999987   99999999999999999999999999987


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      +..
T Consensus       155 ~~~  157 (290)
T cd05613         155 FHE  157 (290)
T ss_pred             ccc
Confidence            654


No 260
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93  E-value=1.9e-25  Score=196.32  Aligned_cols=148  Identities=26%  Similarity=0.424  Sum_probs=129.9

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      +.|.....||+|+||.||++.. .++..||||.+........+.+.+|+..+..++|||++++++.+..++..++||||+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            4445556899999999999976 458899999987654455567899999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++++|..++.    ...+++.....++.|++.||.|||+.+   |+||||||+||++++++.++|+|||++..+..
T Consensus       102 ~~~~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~  170 (292)
T cd06658         102 EGGALTDIVT----HTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK  170 (292)
T ss_pred             CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccc
Confidence            9999998873    235789999999999999999999987   99999999999999999999999999976543


No 261
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93  E-value=1e-24  Score=189.91  Aligned_cols=148  Identities=26%  Similarity=0.493  Sum_probs=131.0

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-CCcCHHHHHHHHHHHhccC---CCccceEEEEEEecCeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQ---HRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~  226 (318)
                      .|+..+.||+|+||.||+|.. .+++.+|+|.+... ......++.+|+.++++++   |||++++++++..++..++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467788999999999999986 56889999988754 3344567889999999986   999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+++++|.+++..    ..+++.....++.|++.||.|||+.+   |+|+||+|+||++++++.++|+|||++..+...
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999988732    36889999999999999999999987   999999999999999999999999999877543


No 262
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=9.8e-27  Score=210.47  Aligned_cols=163  Identities=26%  Similarity=0.427  Sum_probs=139.5

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCc-EEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQ-EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~-~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +.+.|.++..||.|+||+||+|..++.. ..|.|.+...+....++|..|+.+|+..+||+||+|++.|...+.+|++.|
T Consensus        30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            3455677778999999999999876533 456788887788889999999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      ||.||-.+..+.  .-...|.+.++..+++|++.||.|||++.   |||||||+-|||++-+|.++|+|||.+.......
T Consensus       110 FC~GGAVDaiml--EL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~  184 (1187)
T KOG0579|consen  110 FCGGGAVDAIML--ELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR  184 (1187)
T ss_pred             ecCCchHhHHHH--HhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhHH
Confidence            999999988774  34678999999999999999999999987   9999999999999999999999999987654332


Q ss_pred             cccccceeecC
Q 021046          308 LQGNTKRIVGT  318 (318)
Q Consensus       308 ~~~~~~~~~Gt  318 (318)
                      .+  ...++||
T Consensus       185 qk--RDsFIGT  193 (1187)
T KOG0579|consen  185 QK--RDSFIGT  193 (1187)
T ss_pred             hh--hccccCC
Confidence            22  2345665


No 263
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.92  E-value=6e-25  Score=191.93  Aligned_cols=151  Identities=27%  Similarity=0.411  Sum_probs=125.9

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHH-HhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMML-IAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|+..+.||+|+||.||++... +|+.||+|+++... ......+..|+.. ++.++|||++++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888899999999999999874 58999999987542 2233455666665 566789999999999999999999999


Q ss_pred             eccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |++ |+|..++... .....+++..+..++.|++.||.|||++.  +++||||||+||+++.++.+||+|||+++.+.
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            997 6787776432 23457899999999999999999999861  39999999999999999999999999998764


No 264
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92  E-value=4.5e-25  Score=193.07  Aligned_cols=150  Identities=26%  Similarity=0.376  Sum_probs=131.1

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .++|+..+.||+|+||.||++... +++.+|+|.+.... ......+.+|+.++..++||||+++++++...+..++|||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            357888899999999999999764 58899999876532 3345688999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+++++|..++..   ...+++.....++.+++.||.|||+..  +++||||+|+||++++++.++|+|||++..+.
T Consensus        84 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~  155 (284)
T cd06620          84 FMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELI  155 (284)
T ss_pred             cCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence            9999999988732   346899999999999999999999742  39999999999999999999999999987653


No 265
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.92  E-value=3.3e-25  Score=195.31  Aligned_cols=146  Identities=29%  Similarity=0.443  Sum_probs=129.0

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      |.....||+|+||.||++... +++.||+|.+........+.+.+|+..+..++|||++++++++..++..++++||+++
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            444558999999999999764 6889999998765445566788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++|..++.    ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++..+..
T Consensus       103 ~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~  169 (297)
T cd06659         103 GALTDIVS----QTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  169 (297)
T ss_pred             CCHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence            99988762    245889999999999999999999987   99999999999999999999999999976543


No 266
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.92  E-value=1.2e-24  Score=193.34  Aligned_cols=144  Identities=29%  Similarity=0.497  Sum_probs=118.5

Q ss_pred             cccccCCcccEEEEEec---CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEe--cCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE--QGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~  231 (318)
                      .+||+|+||.||+|...   ++..||+|.+....  ....+.+|+.++..++||||+++++++..  +...++|+||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            58999999999999864   35689999887532  23467889999999999999999999864  4577999999875


Q ss_pred             CChhhhhhcC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE----cCCCCceEeecccce
Q 021046          232 KSLDVFLFYP------KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL----DSDMNPKISDFGMAR  301 (318)
Q Consensus       232 g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill----~~~~~~ki~DfGla~  301 (318)
                       +|..++...      .....+++..+..++.|++.||.|||+.+   |+||||||+||++    +.++.+||+|||+|+
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence             666655321      12335889999999999999999999987   9999999999999    567789999999998


Q ss_pred             eecCC
Q 021046          302 IFGGD  306 (318)
Q Consensus       302 ~~~~~  306 (318)
                      .+...
T Consensus       161 ~~~~~  165 (317)
T cd07867         161 LFNSP  165 (317)
T ss_pred             ccCCC
Confidence            77543


No 267
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92  E-value=2.7e-25  Score=191.62  Aligned_cols=149  Identities=28%  Similarity=0.360  Sum_probs=132.6

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      +|+..+.||+|+||.||++... ++..+|+|.+....   ....+.+.+|+..+++++||||+++++++..++..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4788899999999999999875 58899999887532   2346789999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+++++|..++..   ...+++.....++.|+++||.|||+.+   ++|+||+|+||++++++.++|+|||++......
T Consensus        81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            9999999998843   257889999999999999999999987   999999999999999999999999999876543


No 268
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.92  E-value=1.3e-24  Score=187.96  Aligned_cols=152  Identities=27%  Similarity=0.434  Sum_probs=134.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||.|+||.||+|... ++..+++|++.... ....+.+.+|+..++.++|||++++++.+..++..++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888999999999999999864 57889999987532 23567899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|..++........+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            999999999854333356899999999999999999999887   99999999999999999999999999976654


No 269
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=4.4e-26  Score=191.84  Aligned_cols=162  Identities=29%  Similarity=0.324  Sum_probs=136.4

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCH---HHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGL---TEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..++|..+++||+|.||+|.+++- .+++.+|+|++++......   ..-+.|-++|...+||.+..|--.|+..+.+++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            457899999999999999999965 5688999999987543332   334678889999999999999989999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||..||.|.-+|   ...+.+++.....+-..|..||.|||+++   ||.||||.+|.|+|.+|++||+||||++-=-
T Consensus       246 VMeyanGGeLf~HL---srer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  246 VMEYANGGELFFHL---SRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEEEccCceEeeeh---hhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc
Confidence            99999999997666   34567788777788899999999999987   9999999999999999999999999998433


Q ss_pred             CCccccccceeecC
Q 021046          305 GDELQGNTKRIVGT  318 (318)
Q Consensus       305 ~~~~~~~~~~~~Gt  318 (318)
                      .+.  ..+++++||
T Consensus       320 ~~g--~t~kTFCGT  331 (516)
T KOG0690|consen  320 KYG--DTTKTFCGT  331 (516)
T ss_pred             ccc--ceeccccCC
Confidence            222  345678887


No 270
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92  E-value=1.2e-24  Score=188.97  Aligned_cols=150  Identities=31%  Similarity=0.524  Sum_probs=125.5

Q ss_pred             CccccccccCCcccEEEEEec----CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC------
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG------  220 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------  220 (318)
                      |...+.||+|+||.||+|.+.    +++.||||.+...  .....+++.+|+.+++.++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456788999999999999753    3678999988753  2234567889999999999999999999987543      


Q ss_pred             eeEEEEEeccCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          221 ENILIYEYMPNKSLDVFLFYPK---KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                      ..++++||+++|+|..++....   ....+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence            2368899999999988875322   2235788999999999999999999887   999999999999999999999999


Q ss_pred             ccceeecC
Q 021046          298 GMARIFGG  305 (318)
Q Consensus       298 Gla~~~~~  305 (318)
                      |+++.+..
T Consensus       158 g~~~~~~~  165 (273)
T cd05074         158 GLSKKIYS  165 (273)
T ss_pred             cccccccC
Confidence            99987643


No 271
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.92  E-value=8.9e-25  Score=193.90  Aligned_cols=150  Identities=27%  Similarity=0.473  Sum_probs=126.9

Q ss_pred             CCccccccccCCcccEEEEEec---CCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL---NGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENI  223 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~---~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~  223 (318)
                      +|...++||+|+||.||+|...   ++..||+|.+....   ......+.+|+.++..++||||+++++++.+.  +..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3677889999999999999874   47899999987632   33446778899999999999999999999988  7899


Q ss_pred             EEEEeccCCChhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC----CCCceEeec
Q 021046          224 LIYEYMPNKSLDVFLFYPK--KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS----DMNPKISDF  297 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~----~~~~ki~Df  297 (318)
                      +||||+++ +|..++....  ....+++.....++.|++.||.|||+.+   |+||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999976 5555553222  2236889999999999999999999987   999999999999999    999999999


Q ss_pred             ccceeecC
Q 021046          298 GMARIFGG  305 (318)
Q Consensus       298 Gla~~~~~  305 (318)
                      |+++.+..
T Consensus       157 g~~~~~~~  164 (316)
T cd07842         157 GLARLFNA  164 (316)
T ss_pred             ccccccCC
Confidence            99987643


No 272
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=1.4e-25  Score=204.78  Aligned_cols=154  Identities=31%  Similarity=0.498  Sum_probs=133.7

Q ss_pred             ccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChhh
Q 021046          158 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDV  236 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~  236 (318)
                      +||+|.||+||-|+..+ ...+|||-+.....+..+-+..|+.+-+.|+|.|||+++|.+.+++..-+.||-+|||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            69999999999998755 45799999988777777889999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecccceeecCCccccccc
Q 021046          237 FLFYPKKKRLL--GWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIFGGDELQGNTK  313 (318)
Q Consensus       237 ~l~~~~~~~~l--~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~~~~~~~~~~~  313 (318)
                      .|...  =.++  ++.+.-.+.+||++||.|||++.   |||||||-+||||+. .|.+||+|||.++.+.+-..  .|+
T Consensus       662 LLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP--~TE  734 (1226)
T KOG4279|consen  662 LLRSK--WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP--CTE  734 (1226)
T ss_pred             HHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCc--ccc
Confidence            98542  2334  67788889999999999999987   999999999999965 78899999999998876433  456


Q ss_pred             eeecC
Q 021046          314 RIVGT  318 (318)
Q Consensus       314 ~~~Gt  318 (318)
                      ++-||
T Consensus       735 TFTGT  739 (1226)
T KOG4279|consen  735 TFTGT  739 (1226)
T ss_pred             ccccc
Confidence            66676


No 273
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.92  E-value=6.6e-25  Score=192.66  Aligned_cols=149  Identities=31%  Similarity=0.427  Sum_probs=127.5

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ++++|...+.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.++..++|+||+++++++..++..++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            357899999999999999999976 4588999999875432 22346788999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||++ ++|..++..  ....+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++..
T Consensus        83 e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          83 EYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             eccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccccccc
Confidence            9996 667666532  2345778888899999999999999987   999999999999999999999999999764


No 274
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.92  E-value=1.1e-24  Score=189.87  Aligned_cols=148  Identities=27%  Similarity=0.438  Sum_probs=131.2

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..|+..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.+++.++|||++++++++..++..++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45777889999999999999864 57899999887532 33456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|+|.+++.    ...+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++..+..
T Consensus        84 ~~~~~L~~~i~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          84 LGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            99999999883    245788899999999999999999887   99999999999999999999999999987654


No 275
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.92  E-value=1.2e-24  Score=187.62  Aligned_cols=143  Identities=38%  Similarity=0.564  Sum_probs=123.4

Q ss_pred             cccccCCcccEEEEEecC----CcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      ++||+|+||.||+|....    +..+|+|.+..... ...+++..|+.+++.++|||++++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            469999999999996522    26899999876443 24567899999999999999999999876 4568999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+|.+++..   ...+++..+..++.|++.||+|||..+   ++|+||||+||+++.++.+||+|||+++.+...
T Consensus        80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~  148 (257)
T cd05060          80 GPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAG  148 (257)
T ss_pred             CcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecC
Confidence            999999843   336899999999999999999999887   999999999999999999999999999877543


No 276
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.92  E-value=5.7e-25  Score=199.26  Aligned_cols=148  Identities=28%  Similarity=0.396  Sum_probs=125.6

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEec------
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ------  219 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------  219 (318)
                      ..++|...+.||+|+||.||++.. ..++.||||++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457899999999999999999976 45788999998753  223446788999999999999999999987644      


Q ss_pred             CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          220 GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       220 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                      ...++||||+++ +|...+.     ..+++..+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence            356999999975 5665552     24788889999999999999999987   99999999999999999999999999


Q ss_pred             ceeecC
Q 021046          300 ARIFGG  305 (318)
Q Consensus       300 a~~~~~  305 (318)
                      |+....
T Consensus       173 a~~~~~  178 (364)
T cd07875         173 ARTAGT  178 (364)
T ss_pred             ccccCC
Confidence            987644


No 277
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.92  E-value=4.2e-25  Score=191.30  Aligned_cols=149  Identities=30%  Similarity=0.506  Sum_probs=129.9

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC------cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG------QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+.....      ...+.+..|+..+++++||||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            477788999999999999975 5688999998864321      124578999999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeecccceee
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARIF  303 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla~~~  303 (318)
                      |+||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++|+||+|+||+++.++ .+||+|||++..+
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            9999999999998842   346889999999999999999999987   99999999999998776 5999999999877


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ...
T Consensus       155 ~~~  157 (268)
T cd06630         155 AAK  157 (268)
T ss_pred             ccc
Confidence            543


No 278
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.92  E-value=1e-24  Score=190.55  Aligned_cols=149  Identities=31%  Similarity=0.531  Sum_probs=130.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      +|+..+.||+|++|.||+|+.. ++..||||.++.... .....+.+|+.+++.++|||++++++++...+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5788899999999999999875 588999998875432 23456788999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++ +|..++........+++..+..++.|++.||.|||+.+   ++||||||+||++++++.++|+|||+++.+.
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~  151 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFG  151 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence            85 78777754333456899999999999999999999987   9999999999999999999999999997653


No 279
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.92  E-value=8.7e-25  Score=188.79  Aligned_cols=143  Identities=29%  Similarity=0.514  Sum_probs=120.9

Q ss_pred             cccccCCcccEEEEEec----CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEe-cCeeEEEEEecc
Q 021046          157 CKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE-QGENILIYEYMP  230 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~~  230 (318)
                      +.||+|+||.||+|...    +...+|+|++.... ....+.+..|+.+++.++|||++++++++.. ++..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999753    23579999886432 3345678899999999999999999998764 456799999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|+|.+++...  ...+++.....++.|++.||.|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058          81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCcccccccc
Confidence            99999998532  334677888899999999999999887   9999999999999999999999999998654


No 280
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.92  E-value=8.9e-25  Score=189.34  Aligned_cols=148  Identities=32%  Similarity=0.512  Sum_probs=127.5

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-----cCHHHHHHHHHHHhccCCCccceEEEEEEec--Cee
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-----QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~  222 (318)
                      .+|...+.||+|+||.||++... ++..|++|.+.....     .....+.+|+.+++.++||||+++++++.+.  +..
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            46888899999999999999764 588999998864321     2235688899999999999999999998763  567


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++++||+++++|.+++..   ...+++.....++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            899999999999998842   345788999999999999999999877   99999999999999999999999999986


Q ss_pred             ec
Q 021046          303 FG  304 (318)
Q Consensus       303 ~~  304 (318)
                      +.
T Consensus       156 ~~  157 (266)
T cd06651         156 LQ  157 (266)
T ss_pred             cc
Confidence            54


No 281
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.92  E-value=1.2e-24  Score=189.32  Aligned_cols=149  Identities=28%  Similarity=0.411  Sum_probs=132.9

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|+.+++.++|||++++++++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            36788889999999999999864 58899999987543 34456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|.+++..    ..+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  151 (274)
T cd06609          81 CGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTST  151 (274)
T ss_pred             eCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence            999999998842    27899999999999999999999987   999999999999999999999999999887643


No 282
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.92  E-value=1.2e-24  Score=187.96  Aligned_cols=150  Identities=29%  Similarity=0.440  Sum_probs=134.7

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||+|++|.||++... +++.|++|++..... .....+.+|+..+.+++|||++++++++..++..++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36788899999999999999875 489999999876543 3457899999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|.+++..   ...+++.....++.|++.||.|||+ .+   ++|+||+|+||+++.++.++|+|||++..+...
T Consensus        81 ~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~  153 (264)
T cd06623          81 MDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT  153 (264)
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence            999999999843   3668999999999999999999998 77   999999999999999999999999999877544


No 283
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.92  E-value=7.8e-25  Score=192.52  Aligned_cols=149  Identities=27%  Similarity=0.417  Sum_probs=133.2

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      .++|...+.||+|+||.||++.. .++..|++|.+........+.+..|+.+++.++|||++++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            46888999999999999999975 46789999998755455567789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|..++.    ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++..+..
T Consensus        98 ~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          98 LAGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             CCCCcHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence            99999999883    235788999999999999999999987   99999999999999999999999999876654


No 284
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.92  E-value=2.8e-25  Score=191.63  Aligned_cols=144  Identities=28%  Similarity=0.433  Sum_probs=122.9

Q ss_pred             cccccCCcccEEEEEecC--------CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLN--------GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +.||+|+||.||+|....        ...+++|.+........+.+..|+.+++.++|||++++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999997532        234888887654444556789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC--------ceEeecccc
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN--------PKISDFGMA  300 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~--------~ki~DfGla  300 (318)
                      +++|+|..++...  ...+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.        ++++|||++
T Consensus        81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence            9999999998533  336889999999999999999999987   999999999999988765        599999998


Q ss_pred             eeecC
Q 021046          301 RIFGG  305 (318)
Q Consensus       301 ~~~~~  305 (318)
                      .....
T Consensus       156 ~~~~~  160 (258)
T cd05078         156 ITVLP  160 (258)
T ss_pred             cccCC
Confidence            75543


No 285
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.92  E-value=1.5e-24  Score=189.12  Aligned_cols=147  Identities=28%  Similarity=0.443  Sum_probs=129.8

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      -|...+.||+|+||.||+|.. .++..+|+|.+.... ......+.+|+..+.+++||||+++++++..++..++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            466778999999999999976 467899999876432 234467889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ++++|..++.    ...+++.....++.|++.++.|||+.+   ++|+||+|+||+++.++.++|+|||+++.+..
T Consensus        85 ~~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06641          85 GGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence            9999998883    345889999999999999999999987   99999999999999999999999999987644


No 286
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=3.9e-26  Score=218.05  Aligned_cols=169  Identities=25%  Similarity=0.295  Sum_probs=143.1

Q ss_pred             HHHHHHHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEe
Q 021046          143 LASVSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE  218 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~  218 (318)
                      ...+....++|.+.+.||+|+||.|...+++ +++.+|.|++++.   ......-|..|-.+|..-+.+=|++|+-.|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            3344556789999999999999999999874 5788999999863   22334568889999998899999999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                      .+++|+|||||+||+|-.++.   ....+++..+..++..|..||.-||+-|   +|||||||+|||+|..|++||+|||
T Consensus       147 ~~~LYlVMdY~pGGDlltLlS---k~~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLS---KFDRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             ccceEEEEecccCchHHHHHh---hcCCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence            999999999999999988883   3336888888889999999999999887   9999999999999999999999999


Q ss_pred             cceeecCCccccccceeecC
Q 021046          299 MARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       299 la~~~~~~~~~~~~~~~~Gt  318 (318)
                      -+-.+..|+.- .+..-+||
T Consensus       221 sClkm~~dG~V-~s~~aVGT  239 (1317)
T KOG0612|consen  221 SCLKMDADGTV-RSSVAVGT  239 (1317)
T ss_pred             hHHhcCCCCcE-EeccccCC
Confidence            99888877643 33445776


No 287
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.92  E-value=1.1e-24  Score=187.38  Aligned_cols=146  Identities=34%  Similarity=0.544  Sum_probs=127.7

Q ss_pred             cCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      ++|.+.+.||+|+||.||++.. +++.||+|.++..  .....+.+|+.++..++|||++++++++..+ ..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            5688889999999999999975 6778999988653  2346789999999999999999999998764 5799999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++|.+++... ....+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++...
T Consensus        82 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~  151 (254)
T cd05083          82 KGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGS  151 (254)
T ss_pred             CCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecc
Confidence            99999998543 2345789999999999999999999887   9999999999999999999999999998653


No 288
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92  E-value=4.8e-25  Score=214.99  Aligned_cols=158  Identities=23%  Similarity=0.351  Sum_probs=130.6

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEec--Cee
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~  222 (318)
                      ...++|.+.+.||+|+||.||++... ++..+|+|.+...  .......|..|+.++..++||||++++++|...  ...
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            34578999999999999999999864 4678899988643  223356789999999999999999999998654  568


Q ss_pred             EEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeeecCCCCCCEEEcCC--------
Q 021046          223 ILIYEYMPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSR----LRIIHRDLKASNILLDSD--------  289 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~----~~ivH~Dlk~~Nill~~~--------  289 (318)
                      ++||||+++|+|..++.... ....+++..++.|+.||+.||.|||+.+.    .+||||||||+||||+..        
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            99999999999999885422 23568999999999999999999998542    349999999999999642        


Q ss_pred             ---------CCceEeecccceeecC
Q 021046          290 ---------MNPKISDFGMARIFGG  305 (318)
Q Consensus       290 ---------~~~ki~DfGla~~~~~  305 (318)
                               ..+||+|||+++.+..
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~  194 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGI  194 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccc
Confidence                     3489999999987654


No 289
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.92  E-value=5.2e-25  Score=180.63  Aligned_cols=141  Identities=18%  Similarity=0.182  Sum_probs=109.4

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCc--C-------HHHH-----------------HHHHHHHhccCCCcc
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ--G-------LTEF-----------------KNEMMLIAKLQHRHL  209 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~-------~~~~-----------------~~e~~~l~~l~h~ni  209 (318)
                      ...||+|+||.||+|...+|+.||||+++.....  .       ...|                 ..|+..+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3579999999999999888999999998754211  1       1122                 349999999988877


Q ss_pred             ceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCEEEcC
Q 021046          210 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL-HQYSRLRIIHRDLKASNILLDS  288 (318)
Q Consensus       210 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~Dlk~~Nill~~  288 (318)
                      .....+..  ...++||||++++++.....   ....+++.....++.|++.+|.|+ |+.+   |+||||||+||+++ 
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-  152 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-  152 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-
Confidence            54433322  33489999999987754431   234688899999999999999999 6766   99999999999998 


Q ss_pred             CCCceEeecccceeecC
Q 021046          289 DMNPKISDFGMARIFGG  305 (318)
Q Consensus       289 ~~~~ki~DfGla~~~~~  305 (318)
                      ++.++|+|||+|...+.
T Consensus       153 ~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         153 DGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             CCcEEEEEccccccCCC
Confidence            57899999999986543


No 290
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.92  E-value=1.1e-24  Score=194.63  Aligned_cols=145  Identities=21%  Similarity=0.289  Sum_probs=124.3

Q ss_pred             cccccccC--CcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          155 TQCKLGEG--GFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       155 ~~~~lg~G--~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      +.++||+|  +|++||++.. .+|+.||+|++....  ......+.+|+.+++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35789999  7889999976 568999999987542  223346778999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ++|+|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.++++|||.+..+
T Consensus        82 ~~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~  151 (327)
T cd08227          82 AYGSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  151 (327)
T ss_pred             CCCcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcc
Confidence            999999988432 2335889999999999999999999987   999999999999999999999999875443


No 291
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.92  E-value=9.9e-25  Score=191.53  Aligned_cols=158  Identities=28%  Similarity=0.373  Sum_probs=133.8

Q ss_pred             HHHHHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecC-
Q 021046          144 ASVSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQG-  220 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-  220 (318)
                      .++..+.++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+..|+.++.++ +|||++++++++...+ 
T Consensus        15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~   93 (291)
T cd06639          15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK   93 (291)
T ss_pred             ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence            33445678899999999999999999987 468899999886532 2345678899999998 7999999999987643 


Q ss_pred             ----eeEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEe
Q 021046          221 ----ENILIYEYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       221 ----~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                          ..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+
T Consensus        94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~  170 (291)
T cd06639          94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLV  170 (291)
T ss_pred             cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEe
Confidence                579999999999999887532 23456899999999999999999999887   9999999999999999999999


Q ss_pred             ecccceeecC
Q 021046          296 DFGMARIFGG  305 (318)
Q Consensus       296 DfGla~~~~~  305 (318)
                      |||+++.+..
T Consensus       171 dfg~~~~~~~  180 (291)
T cd06639         171 DFGVSAQLTS  180 (291)
T ss_pred             ecccchhccc
Confidence            9999986543


No 292
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.92  E-value=1.7e-25  Score=215.15  Aligned_cols=151  Identities=34%  Similarity=0.504  Sum_probs=123.0

Q ss_pred             HHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEEEec-----
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ-----  219 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----  219 (318)
                      .....+|+..+.||+||||.||+++. -+|+.+|||++... +........+|+.++++|+|||||+++..|.+.     
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            45677899999999999999999975 47999999999754 334456788999999999999999988744210     


Q ss_pred             --------------------------------------------------------------------------------
Q 021046          220 --------------------------------------------------------------------------------  219 (318)
Q Consensus       220 --------------------------------------------------------------------------------  219 (318)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 021046          220 ----------------------------------GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY  265 (318)
Q Consensus       220 ----------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~y  265 (318)
                                                        ..+|+-||||+...|.+++.......  .....++++.+|++||+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence                                              11356788888877777774322111  356778999999999999


Q ss_pred             HHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          266 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       266 LH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      +|+++   ||||||||.||+++++..|||+|||+|..
T Consensus       713 IH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  713 IHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             HHhCc---eeeccCCcceeEEcCCCCeeecccccchh
Confidence            99998   99999999999999999999999999987


No 293
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.92  E-value=1.2e-24  Score=190.46  Aligned_cols=150  Identities=28%  Similarity=0.415  Sum_probs=131.3

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|+..+.||+|+||.||+|... +++.||+|.++..  .....+.+.+|+.++++++||||+++++++..++..+++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36888899999999999999875 5789999988753  23345678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |++++.+..+..   ....+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++..+...
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833          81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            999887776552   2345889999999999999999999987   999999999999999999999999999877654


No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.92  E-value=1.6e-24  Score=190.43  Aligned_cols=150  Identities=28%  Similarity=0.425  Sum_probs=129.4

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENILI  225 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv  225 (318)
                      ++|+..+.||+|+||.||+|... +++.+++|.++....  .....+.+|+.++.+++||||+++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            57888899999999999999875 578999998874322  2234567899999999999999999999887  889999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+++ +|..++...  ...+++.....++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        85 ~e~~~~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVEH-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcCc-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            999974 888877432  236899999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       159 ~  159 (293)
T cd07843         159 P  159 (293)
T ss_pred             C
Confidence            3


No 295
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.92  E-value=1.6e-24  Score=189.74  Aligned_cols=149  Identities=31%  Similarity=0.500  Sum_probs=122.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhcc---CCCccceEEEEEEec-----C
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKL---QHRHLVRLFGCCIEQ-----G  220 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~-----~  220 (318)
                      +|+..+.||+|+||.||+|... +++.||+|.++....  .....+.+|+.++..+   +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999999999864 588999998875321  2223456677777665   799999999998653     4


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      ..+++|||+++ +|..++... ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence            57999999985 787777432 2345899999999999999999999987   999999999999999999999999999


Q ss_pred             eeecC
Q 021046          301 RIFGG  305 (318)
Q Consensus       301 ~~~~~  305 (318)
                      +.+..
T Consensus       156 ~~~~~  160 (288)
T cd07863         156 RIYSC  160 (288)
T ss_pred             ccccC
Confidence            87753


No 296
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.92  E-value=1.6e-24  Score=187.58  Aligned_cols=148  Identities=33%  Similarity=0.503  Sum_probs=127.8

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-----CCcCHHHHHHHHHHHhccCCCccceEEEEEEec--Cee
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-----SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~  222 (318)
                      .+|.+.+.||+|+||.||+|.. .++..||+|.+...     .......+.+|+.++++++||||+++++++.+.  +..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4788899999999999999986 45889999987532     123345788999999999999999999998764  457


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++++||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence            899999999999988842   345788999999999999999999987   99999999999999999999999999986


Q ss_pred             ec
Q 021046          303 FG  304 (318)
Q Consensus       303 ~~  304 (318)
                      +.
T Consensus       156 ~~  157 (264)
T cd06653         156 IQ  157 (264)
T ss_pred             cc
Confidence            54


No 297
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=3.3e-25  Score=196.52  Aligned_cols=152  Identities=25%  Similarity=0.351  Sum_probs=132.7

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      .-|.+.+.||+|.|..|-+|++ -+|..||||++.+..-  -....+.+|++-|+-++|||||+||.+...+..+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            4577788999999999999965 5799999999986432  334467899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE-cCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-DSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill-~~~~~~ki~DfGla~~~~~~  306 (318)
                      .=++|+|.+|+...  ...+.+....+++.||+.|+.|+|+.+   +|||||||+||++ ..-|-+||+|||++..+.+.
T Consensus        98 LGD~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             ecCCchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            99999999999543  456889999999999999999999877   9999999999886 55688999999999877765


Q ss_pred             c
Q 021046          307 E  307 (318)
Q Consensus       307 ~  307 (318)
                      +
T Consensus       173 ~  173 (864)
T KOG4717|consen  173 K  173 (864)
T ss_pred             c
Confidence            4


No 298
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.92  E-value=1.5e-25  Score=182.00  Aligned_cols=154  Identities=29%  Similarity=0.342  Sum_probs=137.3

Q ss_pred             HHhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----e
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----E  221 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~  221 (318)
                      ...++|.+.+.||+|||+-||.++ ..++..+|+|++...+.++.+..++|++..++++|||+++++++...+.     .
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            456789999999999999999997 5678899999998777777888999999999999999999999876543     4


Q ss_pred             eEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          222 NILIYEYMPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      .|+++.|...|+|.+.+...+ ++..+++.+.+.|+.++++||++||+.. +++.||||||.|||+.+.+.++|.|||-+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence            899999999999999886543 4568999999999999999999999975 57999999999999999999999999987


Q ss_pred             ee
Q 021046          301 RI  302 (318)
Q Consensus       301 ~~  302 (318)
                      ..
T Consensus       177 ~~  178 (302)
T KOG2345|consen  177 TQ  178 (302)
T ss_pred             cc
Confidence            64


No 299
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.92  E-value=9.7e-25  Score=205.20  Aligned_cols=154  Identities=21%  Similarity=0.357  Sum_probs=118.9

Q ss_pred             HHhcCCccccccccCCcccEEEEEecC--CcEEEEE------------------EccCCCCcCHHHHHHHHHHHhccCCC
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLN--GQEVAVK------------------RLSNQSGQGLTEFKNEMMLIAKLQHR  207 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK------------------~l~~~~~~~~~~~~~e~~~l~~l~h~  207 (318)
                      ...++|.+.+.||+|+||+||++....  +...++|                  .+.. .......+.+|+.++.+++||
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCC
Confidence            345789999999999999999986532  2222222                  1111 112345688999999999999


Q ss_pred             ccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 021046          208 HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKK--KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL  285 (318)
Q Consensus       208 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nil  285 (318)
                      ||+++++++...+..++|+|++. ++|..++.....  ...........++.|++.||.|||+++   |+||||||+|||
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NIL  299 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIF  299 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEE
Confidence            99999999999999999999985 456665532211  122335567789999999999999987   999999999999


Q ss_pred             EcCCCCceEeecccceeecCC
Q 021046          286 LDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       286 l~~~~~~ki~DfGla~~~~~~  306 (318)
                      ++.++.+||+|||+|+.+...
T Consensus       300 l~~~~~vkL~DFGla~~~~~~  320 (501)
T PHA03210        300 LNCDGKIVLGDFGTAMPFEKE  320 (501)
T ss_pred             ECCCCCEEEEeCCCceecCcc
Confidence            999999999999999887543


No 300
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.92  E-value=2.6e-24  Score=185.13  Aligned_cols=150  Identities=24%  Similarity=0.397  Sum_probs=131.4

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|+..+.||+|+||.+|.+.. .+++.+|+|.+...  ......++.+|+.++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            477889999999999999976 46889999988643  233456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++++|.+++... ....+++.....++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            9999998887432 2345789999999999999999999987   99999999999999999999999999987654


No 301
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.92  E-value=7.1e-25  Score=199.98  Aligned_cols=148  Identities=29%  Similarity=0.405  Sum_probs=128.1

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-C-----CccceEEEEEEecCeeEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-H-----RHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~l  224 (318)
                      +|++.+.||+|+||+|.+|.. .+++.||||++++. .....+-..|+.+|..|+ |     -|+|+++++|...++.||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            788999999999999999975 56999999999874 344566788999999997 4     489999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC--CceEeeccccee
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM--NPKISDFGMARI  302 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~--~~ki~DfGla~~  302 (318)
                      |+|.++ .+|.+++... .-..++......++.||+.||.+||+.+   |||+||||+||||.+.+  .+||+|||.|..
T Consensus       266 VfELL~-~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  266 VFELLS-TNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eehhhh-hhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence            999985 5899988543 3456889999999999999999999887   99999999999997644  699999999986


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      ...
T Consensus       341 ~~q  343 (586)
T KOG0667|consen  341 ESQ  343 (586)
T ss_pred             cCC
Confidence            654


No 302
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.92  E-value=1.5e-24  Score=219.60  Aligned_cols=143  Identities=27%  Similarity=0.498  Sum_probs=123.0

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ...+...+.||+|+||.||+|.. .++..||||++......    ...|+..+++++|||||+++|+|.+++..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            45677778999999999999987 57889999998753322    23468889999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++|+|.+++.      .++|..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+++. ||++...
T Consensus       765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~  832 (968)
T PLN00113        765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL  832 (968)
T ss_pred             CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence            99999999983      37899999999999999999997656679999999999999999988876 6766543


No 303
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.92  E-value=5.8e-24  Score=181.88  Aligned_cols=150  Identities=34%  Similarity=0.551  Sum_probs=134.7

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      +|...+.||+|+||.||++... ++..+++|++..........+.+|+..++.++|||++++++++..++..++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4677889999999999999875 688999999987555566789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++|.+++...  ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||++......
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          81 GGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            99999988432  257899999999999999999999976   999999999999999999999999999877654


No 304
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.92  E-value=1.9e-24  Score=189.02  Aligned_cols=148  Identities=30%  Similarity=0.511  Sum_probs=129.1

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|+..+.||.|+||.||+|... +++.||||++....  ......+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4788899999999999999864 68899999886432  22345788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++ ++|..++... ....+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            96 6788877543 2456899999999999999999999887   9999999999999999999999999997654


No 305
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.92  E-value=4.6e-24  Score=183.10  Aligned_cols=149  Identities=33%  Similarity=0.470  Sum_probs=133.0

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|+..+.||+|++|.||++... +++.+++|.+.....  ...+.+.+|+.++.+++|||++++++++..++..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4777889999999999999764 578999999876543  3456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++||||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627          81 AENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             CCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            999999998843   356899999999999999999999887   999999999999999999999999999877643


No 306
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92  E-value=3.4e-24  Score=185.87  Aligned_cols=153  Identities=27%  Similarity=0.455  Sum_probs=128.1

Q ss_pred             CCccccccccCCcccEEEEEecC--CcEEEEEEccCC----------CCcCHHHHHHHHHHHhc-cCCCccceEEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQ----------SGQGLTEFKNEMMLIAK-LQHRHLVRLFGCCIE  218 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~l~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~  218 (318)
                      +|+..+.||+|+||.||++....  ++.+|+|.+...          ......++..|+.++.+ ++|||++++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47778899999999999998754  678999987532          11233457788887765 799999999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          219 QGENILIYEYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                      ++..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+..  +++|+||+|+||++++++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence            99999999999999998887432 23456889999999999999999999632  3999999999999999999999999


Q ss_pred             ccceeecCC
Q 021046          298 GMARIFGGD  306 (318)
Q Consensus       298 Gla~~~~~~  306 (318)
                      |++......
T Consensus       159 g~~~~~~~~  167 (269)
T cd08528         159 GLAKQKQPE  167 (269)
T ss_pred             cceeecccc
Confidence            999876544


No 307
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.92  E-value=4e-24  Score=175.90  Aligned_cols=142  Identities=21%  Similarity=0.234  Sum_probs=112.6

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCc---------------------C-----HHHHHHHHHHHhccCCCcc
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ---------------------G-----LTEFKNEMMLIAKLQHRHL  209 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---------------------~-----~~~~~~e~~~l~~l~h~ni  209 (318)
                      ...||+|+||.||+|...+|+.||||.++.....                     .     ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999998878999999998754211                     0     1123578899999999988


Q ss_pred             ceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEEcC
Q 021046          210 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS  288 (318)
Q Consensus       210 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlk~~Nill~~  288 (318)
                      .....+...  ..++||||++++++.....   ....++......++.|++.++.++|+ .+   |+||||||+||+++ 
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence            655544333  3489999999886543321   12356778889999999999999999 77   99999999999998 


Q ss_pred             CCCceEeecccceeecCC
Q 021046          289 DMNPKISDFGMARIFGGD  306 (318)
Q Consensus       289 ~~~~ki~DfGla~~~~~~  306 (318)
                      ++.++|+|||+|+.+.++
T Consensus       153 ~~~~~liDFG~a~~~~~~  170 (190)
T cd05145         153 DGKPYIIDVSQAVELDHP  170 (190)
T ss_pred             CCCEEEEEcccceecCCC
Confidence            899999999999988654


No 308
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2.9e-25  Score=193.79  Aligned_cols=155  Identities=30%  Similarity=0.425  Sum_probs=129.3

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-C------CcCHHHHHHHHHHHhccCCCccceEEEEEEec-C
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-S------GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ-G  220 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~  220 (318)
                      .++|-.+.+||+|+|+.||+|.. ...+.||||+-.-. .      ....+...+|.++-+.|+||.||++++++.-+ +
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd  541 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD  541 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence            35677788999999999999964 55778999965321 1      11223456789999999999999999999865 5


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEc---CCCCceEeec
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD---SDMNPKISDF  297 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~---~~~~~ki~Df  297 (318)
                      ..+-|+||++|.+|+-||   +..+.++++++..|+.||+.||.||.+. ++||||-||||.|||+-   ..|.+||+||
T Consensus       542 sFCTVLEYceGNDLDFYL---KQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF  617 (775)
T KOG1151|consen  542 SFCTVLEYCEGNDLDFYL---KQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF  617 (775)
T ss_pred             cceeeeeecCCCchhHHH---HhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence            678999999999999998   4567789999999999999999999987 57899999999999994   4578999999


Q ss_pred             ccceeecCCcc
Q 021046          298 GMARIFGGDEL  308 (318)
Q Consensus       298 Gla~~~~~~~~  308 (318)
                      ||++++.++..
T Consensus       618 GLSKIMdddSy  628 (775)
T KOG1151|consen  618 GLSKIMDDDSY  628 (775)
T ss_pred             chhhhccCCcc
Confidence            99999987643


No 309
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.92  E-value=1.5e-24  Score=188.04  Aligned_cols=145  Identities=35%  Similarity=0.525  Sum_probs=124.7

Q ss_pred             cccccCCcccEEEEEecC-------CcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLN-------GQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +.||+|+||.||+|+..+       ++.+|+|.+.... .....++.+|+.+++.++||||+++++++..++..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999997642       2578999886543 23456889999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-----CceEeeccc
Q 021046          229 MPNKSLDVFLFYPK----KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-----NPKISDFGM  299 (318)
Q Consensus       229 ~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-----~~ki~DfGl  299 (318)
                      +++++|.+++....    ....+++.++..++.|++.||.|||+.+   ++|+||||+||+++.++     .++|+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence            99999999986422    2345789999999999999999999887   99999999999999887     899999999


Q ss_pred             ceeec
Q 021046          300 ARIFG  304 (318)
Q Consensus       300 a~~~~  304 (318)
                      ++.+.
T Consensus       158 ~~~~~  162 (269)
T cd05044         158 ARDIY  162 (269)
T ss_pred             ccccc
Confidence            97654


No 310
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.92  E-value=1e-24  Score=190.67  Aligned_cols=147  Identities=27%  Similarity=0.490  Sum_probs=127.3

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|+..+.||+|+||.||+|... +|+.+|+|.++...  ......+.+|+.++.+++|||++++++++.+.+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4777889999999999999874 68899999886432  22335678899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++ ++|..++..  ....+++.....++.||++||.|||+.+   ++||||||+||+++.++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          81 CD-QDLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            97 477766632  2345899999999999999999999987   9999999999999999999999999998764


No 311
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.92  E-value=2.7e-24  Score=190.34  Aligned_cols=150  Identities=31%  Similarity=0.487  Sum_probs=128.7

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ....|...+.||+|+||.||+|... +++.||+|.+.....   ....++.+|+.++..++|||++++.+++..++..++
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            3456888899999999999999864 588999998864322   233568899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||||++ |++.+++..  ....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++....
T Consensus        93 v~e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          93 VMEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             EHHhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            999997 566665532  2346899999999999999999999987   9999999999999999999999999998664


No 312
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92  E-value=4.1e-24  Score=187.89  Aligned_cols=150  Identities=28%  Similarity=0.417  Sum_probs=127.2

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccC-CCccceEEEEEEecCe-----
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGE-----  221 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~-----  221 (318)
                      ++|+..+.||+|+||.||+|... +++.||+|.+....  ......+.+|+.++.++. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888899999999999999864 68899999876532  223457888999999995 6999999999987766     


Q ss_pred             eEEEEEeccCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecc
Q 021046          222 NILIYEYMPNKSLDVFLFYPKK--KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFG  298 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfG  298 (318)
                      .++||||+++ +|..++.....  ...+++..+..++.||+.||.|||+.+   ++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence            7999999985 78877754322  356899999999999999999999987   999999999999998 8999999999


Q ss_pred             cceeec
Q 021046          299 MARIFG  304 (318)
Q Consensus       299 la~~~~  304 (318)
                      +++.+.
T Consensus       157 ~~~~~~  162 (295)
T cd07837         157 LGRAFS  162 (295)
T ss_pred             cceecC
Confidence            998654


No 313
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.92  E-value=1.8e-24  Score=187.02  Aligned_cols=149  Identities=29%  Similarity=0.386  Sum_probs=131.7

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++|+..+.||+|+||.||++... +++.+++|.+.... .....++.+|+.++++++||||+++++.+..++..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35777889999999999999875 58899999887643 23456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++++|.+++....  ..+++.....++.|++.||+|||+ .+   ++|+||||+||++++++.++|+|||++..+.
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence            99999999885432  578889999999999999999998 66   9999999999999999999999999987654


No 314
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.92  E-value=5.1e-24  Score=183.37  Aligned_cols=150  Identities=26%  Similarity=0.373  Sum_probs=129.2

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEe-cCeeEEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE-QGENILIYE  227 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e  227 (318)
                      +|++.+.||+|+||.||++... +++.+|+|++....  ....+.+..|+.++++++|||++++++.+.. ++..+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4788899999999999999764 47889999986532  2345678899999999999999999998764 446789999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++++|.+++... ....+++.++..++.|++.|++|||+.+   ++|+||||+||+++.++.++|+|||+++.+..
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            99999999888532 2446899999999999999999999987   99999999999999999999999999987753


No 315
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92  E-value=2.7e-25  Score=186.65  Aligned_cols=141  Identities=29%  Similarity=0.421  Sum_probs=127.3

Q ss_pred             cccccCCcccEEEEE-ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          157 CKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      +.||+|+|+.|--+. +.+|.++|||++.+.......+..+|++++...+ |+||++|+++|.+++..|||||-|.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            679999999999885 6789999999999987788889999999999985 99999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC---CceEeecccceee
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM---NPKISDFGMARIF  303 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~---~~ki~DfGla~~~  303 (318)
                      ...+.   +...+++.++.++.++|+.||.|||.++   |.||||||+|||-.+..   -+||+||.|+.-+
T Consensus       164 LshI~---~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  164 LSHIQ---KRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             HHHHH---HhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecccccccc
Confidence            88884   4567899999999999999999999998   99999999999986554   4899999998543


No 316
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.92  E-value=3.7e-24  Score=187.57  Aligned_cols=151  Identities=30%  Similarity=0.429  Sum_probs=129.5

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  226 (318)
                      ++|...+.||.|++|.||++... +++.+|+|.+..... ....++.+|+.++++++||||+++++++...  +..++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36778899999999999999874 578899998875432 3456789999999999999999999998754  4689999


Q ss_pred             EeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          227 EYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       227 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ||+++++|.+++... .....+++.....++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            999999998876432 23456888999999999999999999987   9999999999999999999999999987554


No 317
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92  E-value=5.2e-24  Score=186.51  Aligned_cols=151  Identities=30%  Similarity=0.454  Sum_probs=134.6

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ..+.|+..+.||+|+||.||++... ++..+++|.+..... ....+..|+..+..++|||++++++.+...+..++++|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4567888899999999999999875 688999999876443 56678999999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+++++|.+++....  ..+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.....
T Consensus        96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  168 (286)
T cd06614          96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTK  168 (286)
T ss_pred             ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence            999999999985422  37899999999999999999999977   99999999999999999999999999876543


No 318
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.91  E-value=3.6e-24  Score=186.65  Aligned_cols=142  Identities=30%  Similarity=0.391  Sum_probs=124.1

Q ss_pred             cccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||+|+||+||++.. .+++.+|+|.+....   ......+..|+.++..++|||++++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999975 458899999886432   22344677899999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ..++.... ...+++..+..++.|++.||.|||+.+   ++||||+|+||++++++.+||+|||++..+.
T Consensus        81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~  146 (277)
T cd05577          81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELK  146 (277)
T ss_pred             HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence            98885432 246899999999999999999999987   9999999999999999999999999997664


No 319
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.91  E-value=2.8e-24  Score=192.72  Aligned_cols=149  Identities=30%  Similarity=0.499  Sum_probs=127.4

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEec--Cee
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ--GEN  222 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~  222 (318)
                      ..++|+..+.||+|+||.||+|... +++.+|+|++...  .......+..|+.++.++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            4578889999999999999999875 5789999988542  223445677899999999 999999999998754  367


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||++ ++|..++..    ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.
T Consensus        85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            99999997 588877732    26889999999999999999999987   99999999999999999999999999987


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      +..
T Consensus       157 ~~~  159 (337)
T cd07852         157 LSE  159 (337)
T ss_pred             ccc
Confidence            644


No 320
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.91  E-value=3.8e-24  Score=188.10  Aligned_cols=143  Identities=26%  Similarity=0.403  Sum_probs=127.5

Q ss_pred             ccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          156 QCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ..+||+|+||.||++.. .+++.||||++..........+.+|+.+++.++|||++++++.+..++..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            35899999999999977 46889999988654444566789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      .+++.    ...+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++..+..
T Consensus       105 ~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~  168 (292)
T cd06657         105 TDIVT----HTRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  168 (292)
T ss_pred             HHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence            98773    235789999999999999999999987   99999999999999999999999999876644


No 321
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.91  E-value=3.5e-24  Score=186.00  Aligned_cols=152  Identities=30%  Similarity=0.456  Sum_probs=132.3

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecC------
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQG------  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------  220 (318)
                      +.++|+..+.||+|+||.||+|... +++.+++|.+.... ...+.+.+|+.+++++ +||||+++++++....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            5688999999999999999999874 57889999887543 3456789999999999 6999999999997654      


Q ss_pred             eeEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                      ..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence            4899999999999998875422 2457899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeec
Q 021046          300 ARIFG  304 (318)
Q Consensus       300 a~~~~  304 (318)
                      +....
T Consensus       160 ~~~~~  164 (275)
T cd06608         160 SAQLD  164 (275)
T ss_pred             ceecc
Confidence            97654


No 322
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.91  E-value=6.4e-24  Score=182.36  Aligned_cols=150  Identities=33%  Similarity=0.496  Sum_probs=133.7

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  226 (318)
                      +|...+.||+|++|.||+|... ++..|++|.+.....  ...+.+.+|+..+++++||||+++++.+...  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4677789999999999999875 688999999876432  4567899999999999999999999999988  8899999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||.+......
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            99999999998843   237899999999999999999999977   999999999999999999999999999887654


Q ss_pred             c
Q 021046          307 E  307 (318)
Q Consensus       307 ~  307 (318)
                      .
T Consensus       155 ~  155 (260)
T cd06606         155 E  155 (260)
T ss_pred             c
Confidence            3


No 323
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.91  E-value=1.8e-24  Score=186.74  Aligned_cols=140  Identities=28%  Similarity=0.422  Sum_probs=125.1

Q ss_pred             cccCCcccEEEEEecC-CcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||+|+||.||++.... ++.+++|.+.....   .....+.+|+.++.+++|||++++++.+..++..+++|||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999998764 89999999875433   3456788999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ..++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||++....
T Consensus        81 ~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~  144 (265)
T cd05579          81 ASLLEN---VGSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGL  144 (265)
T ss_pred             HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence            998843   236899999999999999999999987   9999999999999999999999999987654


No 324
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.91  E-value=5.7e-24  Score=183.75  Aligned_cols=141  Identities=27%  Similarity=0.363  Sum_probs=125.4

Q ss_pred             cccCCcccEEEEEec-CCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||.|+||.||++... +++.+|+|.+.....   ...+.+.+|+.++++++||||+++++.+.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999875 488999998865322   3346789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      .+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||+++....
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence            998843   345889999999999999999999987   99999999999999999999999999987754


No 325
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.91  E-value=5.5e-24  Score=185.84  Aligned_cols=141  Identities=29%  Similarity=0.353  Sum_probs=117.6

Q ss_pred             ccccCCcccEEEEEe-cCCcEEEEEEccCCCC---cCHHHHHHHHHHH---hccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          158 KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG---QGLTEFKNEMMLI---AKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      .||+|+||.||++.. .+++.+|+|.+.....   .....+..|..++   ...+|||++.+++.+..++..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999986 4588999998865321   1122344444333   34479999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|+|..++.   ....+++.....++.|++.||.|||+.+   ++||||||+||++++++.++|+|||++..+.
T Consensus        81 ~~~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          81 GGDLHYHLS---QHGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             CCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            999998884   2346899999999999999999999987   9999999999999999999999999997654


No 326
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.91  E-value=4.3e-24  Score=188.38  Aligned_cols=152  Identities=29%  Similarity=0.474  Sum_probs=129.5

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC----
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG----  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----  220 (318)
                      ...++|++.+.||+|+||.||+|... +++.||+|.++...  ......+..|+.++..++|||++++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            45678999999999999999999875 57899999987532  233356788999999999999999999987655    


Q ss_pred             ------eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceE
Q 021046          221 ------ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI  294 (318)
Q Consensus       221 ------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki  294 (318)
                            ..++|+||+++ ++..++..  ....+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+||
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence                  78999999986 56555532  2346899999999999999999999987   999999999999999999999


Q ss_pred             eecccceeecC
Q 021046          295 SDFGMARIFGG  305 (318)
Q Consensus       295 ~DfGla~~~~~  305 (318)
                      +|||++..+..
T Consensus       158 ~dfg~~~~~~~  168 (302)
T cd07864         158 ADFGLARLYNS  168 (302)
T ss_pred             CcccccccccC
Confidence            99999987654


No 327
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.91  E-value=7.4e-24  Score=182.17  Aligned_cols=151  Identities=26%  Similarity=0.417  Sum_probs=130.7

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+...  .......+.+|+.++++++|||++++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            477889999999999999976 46788999988653  233456789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla~~~~~~  306 (318)
                      +++++|.+++... ....+++..+..++.|++.+|.|||+++   ++|+||+|+||++++++ .+||+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            9999999998532 2445889999999999999999999987   99999999999998654 5899999999877543


No 328
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.91  E-value=7.1e-24  Score=185.67  Aligned_cols=147  Identities=26%  Similarity=0.408  Sum_probs=129.8

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      +|...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.++..++|||++++++++...+..++++||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            344557899999999999986 4688999998875544555678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +++|.+++..    ..+++..+..++.|++.||+|||+.+   ++||||+|+||+++.++.++|+|||++.....
T Consensus       100 ~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648         100 GGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             CCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence            9999998843    45888999999999999999999987   99999999999999999999999999876543


No 329
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.91  E-value=4.9e-24  Score=186.21  Aligned_cols=157  Identities=29%  Similarity=0.444  Sum_probs=132.3

Q ss_pred             HHHHHHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEe--
Q 021046          143 LASVSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIE--  218 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--  218 (318)
                      +.++..+.+.|+..+.||+|+||.||+|.. .+++.+|+|.+... .....++..|+.++.++ +|||++++++++..  
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            334445668899999999999999999987 45788999988653 23445788899999998 69999999999863  


Q ss_pred             ----cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceE
Q 021046          219 ----QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKI  294 (318)
Q Consensus       219 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki  294 (318)
                          .+..+++|||+++|+|..++... ....+++..+..++.|++.||.|||+.+   |+|+||+|+||++++++.++|
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence                45779999999999999988543 2345788889999999999999999987   999999999999999999999


Q ss_pred             eecccceeec
Q 021046          295 SDFGMARIFG  304 (318)
Q Consensus       295 ~DfGla~~~~  304 (318)
                      +|||++....
T Consensus       163 ~dfg~~~~~~  172 (282)
T cd06636         163 VDFGVSAQLD  172 (282)
T ss_pred             eeCcchhhhh
Confidence            9999987553


No 330
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.91  E-value=5.1e-24  Score=191.50  Aligned_cols=151  Identities=25%  Similarity=0.389  Sum_probs=128.7

Q ss_pred             HHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC---
Q 021046          147 SAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG---  220 (318)
Q Consensus       147 ~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---  220 (318)
                      ....++|...+.||+|+||.||++.. .++..||||++....  ......+.+|+.+++.++||||+++++++..+.   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            34567899999999999999999975 468899999886432  223456889999999999999999999987654   


Q ss_pred             ---eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          221 ---ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       221 ---~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                         ..++||||+ +++|..++.    ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+||
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~df  162 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDF  162 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeec
Confidence               358999998 778887763    346899999999999999999999987   999999999999999999999999


Q ss_pred             ccceeecC
Q 021046          298 GMARIFGG  305 (318)
Q Consensus       298 Gla~~~~~  305 (318)
                      |+++....
T Consensus       163 g~~~~~~~  170 (343)
T cd07880         163 GLARQTDS  170 (343)
T ss_pred             cccccccc
Confidence            99987643


No 331
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.91  E-value=4.3e-24  Score=191.43  Aligned_cols=148  Identities=26%  Similarity=0.450  Sum_probs=126.8

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC-CcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----ee
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----EN  222 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~  222 (318)
                      .++|.+.+.||+|+||.||+|.. .+++.||+|.+.... ......+..|+.++.+++||||+++++++...+     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999999976 468899999986432 234456889999999999999999999876543     57


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++++||+++ +|..++    ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~~-~l~~~~----~~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELMET-DLYKLI----KTQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhccc-CHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence            999999975 776665    2346899999999999999999999987   99999999999999999999999999987


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      ...
T Consensus       156 ~~~  158 (336)
T cd07849         156 ADP  158 (336)
T ss_pred             ccc
Confidence            653


No 332
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91  E-value=3.7e-24  Score=198.55  Aligned_cols=153  Identities=24%  Similarity=0.368  Sum_probs=120.8

Q ss_pred             HhcCCccccccccCCcccEEEEEe-----------------cCCcEEEEEEccCCCCcCHHH--------------HHHH
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-----------------LNGQEVAVKRLSNQSGQGLTE--------------FKNE  197 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-----------------~~~~~vavK~l~~~~~~~~~~--------------~~~e  197 (318)
                      ..++|.+.++||+|+||.||+|..                 ..++.||||++........++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                 235679999987543222233              3446


Q ss_pred             HHHHhccCCCcc-----ceEEEEEEe--------cCeeEEEEEeccCCChhhhhhcCCC---------------------
Q 021046          198 MMLIAKLQHRHL-----VRLFGCCIE--------QGENILIYEYMPNKSLDVFLFYPKK---------------------  243 (318)
Q Consensus       198 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~~---------------------  243 (318)
                      +.++.+++|.++     ++++++|..        .+..+|||||+++|+|.++++....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777776554     678888764        3568999999999999998863210                     


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          244 KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       244 ~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ...++|..+..++.|++.+|.|||+.+   |+||||||+||+++.++.+||+|||+|+.+.
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence            123567888999999999999999987   9999999999999999999999999997654


No 333
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.91  E-value=1.8e-24  Score=188.42  Aligned_cols=150  Identities=31%  Similarity=0.461  Sum_probs=132.8

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv  225 (318)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .....+.+..|+.++.+++ ||||+++++++..++..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46888899999999999999874 6889999988653   2233467889999999998 99999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+++++|.+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++..+..
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999998843   347999999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      .
T Consensus       155 ~  155 (280)
T cd05581         155 N  155 (280)
T ss_pred             c
Confidence            3


No 334
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.91  E-value=6.2e-24  Score=183.33  Aligned_cols=156  Identities=27%  Similarity=0.464  Sum_probs=130.2

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEe--cCeeEEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE--QGENILIY  226 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~  226 (318)
                      +|+..+.||.|+||.||++.. .++..+|+|.+...  .....+.+..|+.+++.++|||++++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            477788999999999999975 46788999988643  22334578899999999999999999998864  34678999


Q ss_pred             EeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          227 EYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYS--RLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       227 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~--~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ||+++++|..++... .....+++.....++.|++.||.|||..+  ..+++|+||+|+||++++++.+||+|||++..+
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999988542 23467899999999999999999999332  234999999999999999999999999999987


Q ss_pred             cCCc
Q 021046          304 GGDE  307 (318)
Q Consensus       304 ~~~~  307 (318)
                      ....
T Consensus       161 ~~~~  164 (265)
T cd08217         161 GHDS  164 (265)
T ss_pred             cCCc
Confidence            6543


No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.91  E-value=9.3e-24  Score=184.56  Aligned_cols=148  Identities=32%  Similarity=0.527  Sum_probs=128.9

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeEEEEE
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENILIYE  227 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e  227 (318)
                      |+..+.||+|+||.||+|... +++.+|+|.+....  ......+.+|+.++..++|||++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            566789999999999999875 47899999997653  33446788999999999999999999999988  88999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+++ +|..++...  ...+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||++..+...
T Consensus        81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            9985 787777432  257899999999999999999999987   999999999999999999999999999877554


No 336
>PTZ00284 protein kinase; Provisional
Probab=99.91  E-value=6.1e-24  Score=198.62  Aligned_cols=150  Identities=23%  Similarity=0.315  Sum_probs=120.1

Q ss_pred             HHHHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCC------CccceEEEEEEe
Q 021046          146 VSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH------RHLVRLFGCCIE  218 (318)
Q Consensus       146 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~~  218 (318)
                      +....++|.+.++||+|+||.||+|... +++.||||+++... ....++..|+.++..++|      ++++++++++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3445678999999999999999999864 57889999986532 233456677777777654      458899998876


Q ss_pred             c-CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCEEEcCCC------
Q 021046          219 Q-GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY-SRLRIIHRDLKASNILLDSDM------  290 (318)
Q Consensus       219 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~-~~~~ivH~Dlk~~Nill~~~~------  290 (318)
                      . +..++|||++ +++|.+++.   ....+++..+..|+.||+.||.|||++ +   ||||||||+|||++.++      
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~---~~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIM---KHGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence            5 4678999987 667877773   235689999999999999999999974 5   99999999999998765      


Q ss_pred             ----------CceEeecccceee
Q 021046          291 ----------NPKISDFGMARIF  303 (318)
Q Consensus       291 ----------~~ki~DfGla~~~  303 (318)
                                .+||+|||++...
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~  298 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDE  298 (467)
T ss_pred             cccccCCCCceEEECCCCccccC
Confidence                      4999999988643


No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91  E-value=8.7e-24  Score=187.21  Aligned_cols=151  Identities=31%  Similarity=0.466  Sum_probs=128.4

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEec--CeeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ--GENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~  223 (318)
                      ..++|+..+.||+|+||.||+|... +++.||+|.++....  .....+.+|+.++.+++|||++++++++...  +..+
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            3568999999999999999999874 588999998864322  2233567899999999999999999998765  5689


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +||||+++ +|..++...  ...+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.+
T Consensus        85 lv~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~  158 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY  158 (309)
T ss_pred             EEEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeec
Confidence            99999975 787776432  356899999999999999999999987   999999999999999999999999999877


Q ss_pred             cC
Q 021046          304 GG  305 (318)
Q Consensus       304 ~~  305 (318)
                      ..
T Consensus       159 ~~  160 (309)
T cd07845         159 GL  160 (309)
T ss_pred             CC
Confidence            54


No 338
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.91  E-value=1.6e-23  Score=184.07  Aligned_cols=149  Identities=28%  Similarity=0.466  Sum_probs=125.9

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|+..+.||+|+||.||+|... +++.||+|.+....  ....+.+.+|+.++++++|||++++++++..++..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            56888899999999999999874 68899999886532  2334578899999999999999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecccceeec
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIFG  304 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~~  304 (318)
                      |++ ++|..++... ....+++.....++.||+.||+|||+++   ++|+||+|+||+++. ++.+||+|||++....
T Consensus        82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            996 4777666332 2334678888899999999999999987   999999999999985 5679999999998654


No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91  E-value=6.3e-24  Score=186.13  Aligned_cols=148  Identities=28%  Similarity=0.364  Sum_probs=128.0

Q ss_pred             CCccccccccCCcccEEEEEe----cCCcEEEEEEccCCC----CcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCee
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL----LNGQEVAVKRLSNQS----GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~  222 (318)
                      +|...+.||+|+||.||+++.    .++..||||.++...    ....+.+..|+.++.++ +|||++++++.+..++..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            467788999999999999974    356789999886432    22345688999999999 599999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||+++|+|..++..   ...+++.....++.|++.+|.|||+.+   ++||||+|+||+++.++.++|+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence            999999999999988842   346888999999999999999999877   99999999999999999999999999987


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      +..
T Consensus       155 ~~~  157 (288)
T cd05583         155 FLA  157 (288)
T ss_pred             ccc
Confidence            643


No 340
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.91  E-value=2e-23  Score=179.36  Aligned_cols=152  Identities=24%  Similarity=0.431  Sum_probs=134.4

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|...+.||+|+||.||++... ++..+++|++.....  .....+..|+..++.++|||++++.+.+..++..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4778889999999999999874 588999999875433  4556789999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|..++.... ....+++..+..++.+++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            99999999885432 2467899999999999999999999987   999999999999999999999999999876554


No 341
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.91  E-value=1.2e-23  Score=186.06  Aligned_cols=152  Identities=29%  Similarity=0.488  Sum_probs=127.2

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC----
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG----  220 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----  220 (318)
                      ...++|...+.||+|+||.||+|... +++.||||.+....  ......+.+|+.++++++||||+++++++...+    
T Consensus         9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865           9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            34568999999999999999999864 58899999886432  222345678999999999999999999987654    


Q ss_pred             ----eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEee
Q 021046          221 ----ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISD  296 (318)
Q Consensus       221 ----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~D  296 (318)
                          ..++||||+.+ +|..++..  ....+++.+...++.|++.||.|||+++   ++|+||||+||+++.++.+||+|
T Consensus        89 ~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~d  162 (310)
T cd07865          89 RYKGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLAD  162 (310)
T ss_pred             CCCceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECc
Confidence                34999999975 77766632  2346899999999999999999999987   99999999999999999999999


Q ss_pred             cccceeecC
Q 021046          297 FGMARIFGG  305 (318)
Q Consensus       297 fGla~~~~~  305 (318)
                      ||++..+..
T Consensus       163 fg~~~~~~~  171 (310)
T cd07865         163 FGLARAFSL  171 (310)
T ss_pred             CCCcccccC
Confidence            999987643


No 342
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.91  E-value=1.1e-23  Score=183.99  Aligned_cols=147  Identities=30%  Similarity=0.502  Sum_probs=127.6

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      |+..+.||.|++|.||+|... +|..||+|++....  ......+.+|+..++.++|||++++++++.+++..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            566789999999999999764 68999999887542  223457889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      + ++|..++.... ...+++..+..++.|++.||+|||+.+   ++||||+|+||+++.++.++|+|||+++.+.
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence            5 68888874322 246899999999999999999999987   9999999999999999999999999998654


No 343
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.91  E-value=1.7e-24  Score=189.35  Aligned_cols=156  Identities=28%  Similarity=0.342  Sum_probs=135.9

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ..+.|..-+.||+|+||.||-++. .+|+.+|.|++.+.   ..++....++|-.+|.+++.+.||.+--.+.+.+.+++
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence            345777888999999999999965 46889999988653   23455667899999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |+..|+||+|.-++... .+..++++....++.+|+.||++||...   ||.||+||+|||+|+.|+++|+|+|||.-+.
T Consensus       263 VLtlMNGGDLkfHiyn~-g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNH-GNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EEEeecCCceeEEeecc-CCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence            99999999998777433 3467999999999999999999999987   9999999999999999999999999998887


Q ss_pred             CCcc
Q 021046          305 GDEL  308 (318)
Q Consensus       305 ~~~~  308 (318)
                      ..+.
T Consensus       339 ~g~~  342 (591)
T KOG0986|consen  339 EGKP  342 (591)
T ss_pred             CCCc
Confidence            6544


No 344
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.91  E-value=1.2e-23  Score=189.90  Aligned_cols=149  Identities=30%  Similarity=0.418  Sum_probs=126.6

Q ss_pred             HhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----  220 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----  220 (318)
                      ..++|+..+.||+|+||.||++.. .+++.||+|.+...  .......+.+|+.++.+++||||+++++++....     
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457899999999999999999976 46889999998643  2233456788999999999999999999986543     


Q ss_pred             -eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          221 -ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       221 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                       ..++||||+++ +|...+..     .+++.....++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence             46999999964 77776621     2788899999999999999999987   99999999999999999999999999


Q ss_pred             ceeecCC
Q 021046          300 ARIFGGD  306 (318)
Q Consensus       300 a~~~~~~  306 (318)
                      ++.....
T Consensus       165 ~~~~~~~  171 (353)
T cd07850         165 ARTAGTS  171 (353)
T ss_pred             ceeCCCC
Confidence            9876543


No 345
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.91  E-value=1.7e-23  Score=182.64  Aligned_cols=141  Identities=30%  Similarity=0.350  Sum_probs=117.7

Q ss_pred             ccccCCcccEEEEEe-cCCcEEEEEEccCCCC---cCHHHHHHHHH---HHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          158 KLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG---QGLTEFKNEMM---LIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      .||+|+||.||++.. .+++.||+|.+.....   .....+..|..   .+....|||++++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999976 4588999998865321   11223444443   3444579999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|+|..++.   ....+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++.+.
T Consensus        81 g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          81 GGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            999998873   3456899999999999999999999987   9999999999999999999999999997654


No 346
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.91  E-value=6.4e-24  Score=190.19  Aligned_cols=149  Identities=23%  Similarity=0.399  Sum_probs=128.0

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEe----cCee
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE----QGEN  222 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~  222 (318)
                      .++|+..+.||+|+||.||++... ++..||+|++....  ......+.+|+.++.+++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            378898999999999999999764 58899999987532  2345677889999999999999999998763    3467


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++||||+. |+|..++.   ....+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          84 YVVMDLME-SDLHHIIH---SDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEehhh-hhHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence            99999996 68888773   3345899999999999999999999987   99999999999999999999999999987


Q ss_pred             ecC
Q 021046          303 FGG  305 (318)
Q Consensus       303 ~~~  305 (318)
                      ...
T Consensus       157 ~~~  159 (334)
T cd07855         157 LSS  159 (334)
T ss_pred             ecc
Confidence            654


No 347
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.91  E-value=3.6e-25  Score=214.02  Aligned_cols=151  Identities=30%  Similarity=0.446  Sum_probs=132.6

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      +-++.....||.|.||+||-|.. .+|...|+|-++..  .........+|+.++..|+|||+|+++|+-.+.+..++.|
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence            34677788999999999999964 66888999977643  2344567789999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |||++|+|.+.+   ..++..++.....+..|++.|+.|||+++   ||||||||.||+++.+|.+|++|||-|+.+.++
T Consensus      1314 EyC~~GsLa~ll---~~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLL---EHGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHhccCcHHHHH---HhcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            999999999988   34556777777888999999999999988   999999999999999999999999999888765


No 348
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.91  E-value=1.5e-23  Score=188.64  Aligned_cols=154  Identities=28%  Similarity=0.386  Sum_probs=129.5

Q ss_pred             HHHHHHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEec
Q 021046          143 LASVSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ  219 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~  219 (318)
                      ..++....++|...+.||+|+||.||++.. .+++.||+|++....  ....+.+.+|+.++.+++||||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            344556778999999999999999999975 568899999987532  22345688899999999999999999988643


Q ss_pred             ------CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCce
Q 021046          220 ------GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPK  293 (318)
Q Consensus       220 ------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~k  293 (318)
                            +..+++++++ +++|..++.    ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEE
Confidence                  3467788776 788887763    235889999999999999999999987   99999999999999999999


Q ss_pred             Eeecccceeec
Q 021046          294 ISDFGMARIFG  304 (318)
Q Consensus       294 i~DfGla~~~~  304 (318)
                      |+|||+++...
T Consensus       161 l~dfg~~~~~~  171 (345)
T cd07877         161 ILDFGLARHTD  171 (345)
T ss_pred             Eeccccccccc
Confidence            99999998654


No 349
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.91  E-value=2.2e-23  Score=185.35  Aligned_cols=149  Identities=32%  Similarity=0.493  Sum_probs=127.6

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ..|...+.||+|+||.||++.. .++..+|+|.+.....   .....+..|+.++++++|||++++++++..++..++||
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            3477788999999999999986 4578999998864322   23457889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++ +|.+.+..  ....+++..+..++.|++.||.|||+.+   ++||||+|+||+++.++.+||+|||++.....
T Consensus       105 e~~~g-~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (317)
T cd06635         105 EYCLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP  177 (317)
T ss_pred             eCCCC-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence            99974 67666532  2456899999999999999999999987   99999999999999999999999999876543


No 350
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.91  E-value=2.8e-24  Score=192.82  Aligned_cols=158  Identities=26%  Similarity=0.364  Sum_probs=131.8

Q ss_pred             cCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCC--------cCHHHHHHHHHHHhccC---CCccceEEEEEEe
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG--------QGLTEFKNEMMLIAKLQ---HRHLVRLFGCCIE  218 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~--------~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~  218 (318)
                      .+|.....+|+|+||+|+.+.++. ...|+||.+.+..-        ...-..-.|+.+|+.++   |+||++++++|.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            468888999999999999998754 56799998875321        11122457999999997   9999999999999


Q ss_pred             cCeeEEEEEecc-CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeec
Q 021046          219 QGENILIYEYMP-NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDF  297 (318)
Q Consensus       219 ~~~~~lv~e~~~-~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~Df  297 (318)
                      ++..||+||-.. +-+|.+++   .....+++..+..|++|++-|+++||+++   |||||||-+||.++.+|-+||+||
T Consensus       641 dd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidf  714 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDF  714 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeec
Confidence            999999999875 44666666   34567899999999999999999999998   999999999999999999999999


Q ss_pred             ccceeecCCccccccceeecC
Q 021046          298 GMARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       298 Gla~~~~~~~~~~~~~~~~Gt  318 (318)
                      |-|.......+    ..++||
T Consensus       715 gsaa~~ksgpf----d~f~gt  731 (772)
T KOG1152|consen  715 GSAAYTKSGPF----DVFVGT  731 (772)
T ss_pred             cchhhhcCCCc----ceeeee
Confidence            99988766554    356666


No 351
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.91  E-value=1.2e-23  Score=180.93  Aligned_cols=151  Identities=26%  Similarity=0.459  Sum_probs=130.5

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|...+.||+|+||.||++... ++..+|+|.+...  .....+.+.+|+.+++.++|||++++++.+..++..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4778899999999999999874 5788999988653  223456788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC-ceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN-PKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~-~ki~DfGla~~~~~~  306 (318)
                      +++++|.+++... ....+++..+..++.|++.||.|||+.+   ++|+||||+||++++++. +||+|||++..+..+
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence            9999999988532 2345789999999999999999999987   999999999999998864 699999999877543


No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.90  E-value=1.7e-23  Score=187.45  Aligned_cols=148  Identities=28%  Similarity=0.413  Sum_probs=126.4

Q ss_pred             hcCCcc-ccccccCCcccEEEEEec-CCcEEEEEEccCCCCcC--------------HHHHHHHHHHHhccCCCccceEE
Q 021046          150 TENFST-QCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQG--------------LTEFKNEMMLIAKLQHRHLVRLF  213 (318)
Q Consensus       150 ~~~~~~-~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~  213 (318)
                      .++|.. .+.||+|+||.||+|... +++.||||.+.......              ...+.+|+.++..++||||++++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV   86 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence            345653 467999999999999864 68899999886532211              12477899999999999999999


Q ss_pred             EEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCce
Q 021046          214 GCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPK  293 (318)
Q Consensus       214 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~k  293 (318)
                      +++..++..++||||++ |+|.+++.   ....+++.....++.|++.||.|||+.+   ++|+||+|+||+++.++.+|
T Consensus        87 ~~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k  159 (335)
T PTZ00024         87 DVYVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK  159 (335)
T ss_pred             EEEecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence            99999999999999997 68888773   3446889999999999999999999987   99999999999999999999


Q ss_pred             Eeecccceeec
Q 021046          294 ISDFGMARIFG  304 (318)
Q Consensus       294 i~DfGla~~~~  304 (318)
                      |+|||+++.+.
T Consensus       160 l~dfg~~~~~~  170 (335)
T PTZ00024        160 IADFGLARRYG  170 (335)
T ss_pred             ECCccceeecc
Confidence            99999998775


No 353
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.90  E-value=4.3e-23  Score=179.01  Aligned_cols=149  Identities=23%  Similarity=0.310  Sum_probs=122.0

Q ss_pred             HHHHhcCCcccccc--ccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhc-cCCCccceEEEEEEecCe
Q 021046          146 VSAATENFSTQCKL--GEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAK-LQHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       146 ~~~~~~~~~~~~~l--g~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~  221 (318)
                      .....++|.+.+.+  |+|+||.||++.. .++..+|+|.+........     |+..... .+|||++++++.+..++.
T Consensus         9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~   83 (267)
T PHA03390          9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKG   83 (267)
T ss_pred             HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence            34455677777776  9999999999976 4578899998865322211     2222221 279999999999999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeecccc
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMA  300 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla  300 (318)
                      .++||||+++|+|..++..   ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++ .++|+|||++
T Consensus        84 ~~iv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            9999999999999998843   337899999999999999999999987   99999999999999998 9999999999


Q ss_pred             eeecC
Q 021046          301 RIFGG  305 (318)
Q Consensus       301 ~~~~~  305 (318)
                      +....
T Consensus       158 ~~~~~  162 (267)
T PHA03390        158 KIIGT  162 (267)
T ss_pred             eecCC
Confidence            87654


No 354
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.90  E-value=2.2e-23  Score=179.88  Aligned_cols=142  Identities=25%  Similarity=0.343  Sum_probs=119.5

Q ss_pred             cccccCCcccEEEEEe-cCCcEEEEEEccCCCC---cCHHHHHHHHHH-HhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG---QGLTEFKNEMML-IAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.||+|+||.||+|.. .+++.||+|.+.....   .....+..|..+ ....+|||++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5699999999999976 4578999999865322   122334455444 4455899999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++|..++.   ....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+++...
T Consensus        82 ~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  148 (260)
T cd05611          82 GDCASLIK---TLGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGL  148 (260)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceecc
Confidence            99999884   2346889999999999999999999987   9999999999999999999999999998654


No 355
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.90  E-value=1.4e-23  Score=188.16  Aligned_cols=149  Identities=25%  Similarity=0.442  Sum_probs=127.3

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEec-----Ce
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ-----GE  221 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~  221 (318)
                      .++|...+.||+|+||.||++.. .+++.||||.+...  .......+..|+.++..++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35788899999999999999976 46889999988753  233345678899999999999999999988754     34


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      .++|+||+. ++|..++.   ....+++.....++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++
T Consensus        84 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999996 67877773   3456899999999999999999999987   9999999999999999999999999998


Q ss_pred             eecC
Q 021046          302 IFGG  305 (318)
Q Consensus       302 ~~~~  305 (318)
                      ....
T Consensus       157 ~~~~  160 (337)
T cd07858         157 TTSE  160 (337)
T ss_pred             ccCC
Confidence            7644


No 356
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.90  E-value=3.1e-23  Score=180.93  Aligned_cols=146  Identities=26%  Similarity=0.375  Sum_probs=122.7

Q ss_pred             CccccccccCCcccEEEEEe-cCCcEEEEEEccCCC-CcCHHHHHHHHHHHhccC-CCccceEEEEEEec--CeeEEEEE
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQ--GENILIYE  227 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e  227 (318)
                      |...+.||+|+||.||++.. .+++.+|+|+++... .........|+..+.++. |||++++++++.++  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            56678999999999999986 468899999887542 222234557888888885 99999999999987  88999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |++ |+|.+++..  ....+++..+..++.|++.||.|||+.+   ++||||+|+||+++. +.+||+|||+++.+..
T Consensus        81 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          81 LMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             cCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            997 577666632  2346899999999999999999999987   999999999999999 9999999999987643


No 357
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.90  E-value=3.7e-23  Score=185.09  Aligned_cols=147  Identities=29%  Similarity=0.412  Sum_probs=123.0

Q ss_pred             CCccccccccCCcccEEEEEec-C--CcEEEEEEccCCC--CcCHHHHHHHHHHHhcc-CCCccceEEEEEEec----Ce
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-N--GQEVAVKRLSNQS--GQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQ----GE  221 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~--~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~  221 (318)
                      +|...+.||+|+||.||++... .  +..||+|++....  ....+.+.+|+.++.++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4777889999999999999864 3  6789999887532  22345788899999999 599999999976543    35


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      .++++||+. ++|..++.   ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+|+
T Consensus        81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            688888886 68888773   3456899999999999999999999987   9999999999999999999999999998


Q ss_pred             eecC
Q 021046          302 IFGG  305 (318)
Q Consensus       302 ~~~~  305 (318)
                      .+..
T Consensus       154 ~~~~  157 (332)
T cd07857         154 GFSE  157 (332)
T ss_pred             eccc
Confidence            7653


No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.90  E-value=1.3e-23  Score=187.77  Aligned_cols=148  Identities=30%  Similarity=0.436  Sum_probs=129.5

Q ss_pred             CCccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC-----eeE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----ENI  223 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~  223 (318)
                      +|.+.+.||+|+||.||++... ++..+|+|++....  ....+.+.+|+..++.++||||+++++++...+     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999875 48899999987643  344567899999999999999999999998775     789


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ++|||++ ++|..++.   ....+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.++|+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIK---SPQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999998 47877773   3347899999999999999999999987   999999999999999999999999999887


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ...
T Consensus       154 ~~~  156 (330)
T cd07834         154 DPD  156 (330)
T ss_pred             ccc
Confidence            654


No 359
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.90  E-value=1.2e-23  Score=201.18  Aligned_cols=159  Identities=31%  Similarity=0.465  Sum_probs=135.6

Q ss_pred             HHHHhcCCccccccccCCcccEEEEEec----C----CcEEEEEEccCCCC-cCHHHHHHHHHHHhcc-CCCccceEEEE
Q 021046          146 VSAATENFSTQCKLGEGGFGPVYKGRLL----N----GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKL-QHRHLVRLFGC  215 (318)
Q Consensus       146 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~----~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~  215 (318)
                      ++...++..+.+.||+|.||.|++|...    .    ...||||.++.... ...+.+..|+.+|..+ +|||++.++|+
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~  370 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA  370 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence            4455566677779999999999999742    1    45799999986533 4567899999999998 69999999999


Q ss_pred             EEecCeeEEEEEeccCCChhhhhhcCC-----C------C--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 021046          216 CIEQGENILIYEYMPNKSLDVFLFYPK-----K------K--RLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKAS  282 (318)
Q Consensus       216 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~------~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~  282 (318)
                      |..++..++|+||++.|+|..+|...+     .      .  ..+...+.+.++.|||.||+||++..   +|||||.++
T Consensus       371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaR  447 (609)
T KOG0200|consen  371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAAR  447 (609)
T ss_pred             eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhh
Confidence            999999999999999999999997654     0      1  23888999999999999999999876   999999999


Q ss_pred             CEEEcCCCCceEeecccceeecCCc
Q 021046          283 NILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       283 Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      |||++.+..+||+|||+||....++
T Consensus       448 NVLi~~~~~~kIaDFGlar~~~~~~  472 (609)
T KOG0200|consen  448 NVLITKNKVIKIADFGLARDHYNKD  472 (609)
T ss_pred             hEEecCCCEEEEccccceeccCCCC
Confidence            9999999999999999999665543


No 360
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.90  E-value=1.7e-23  Score=179.82  Aligned_cols=152  Identities=30%  Similarity=0.457  Sum_probs=132.2

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +|++.+.||+|+||.||++.. .+++.+++|.+....  .....++..|+.++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            477889999999999999975 467899999887532  23345788999999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++|..++.... ....+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            99999999875422 2356899999999999999999999987   999999999999999999999999999877543


No 361
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.90  E-value=3e-23  Score=184.11  Aligned_cols=145  Identities=23%  Similarity=0.210  Sum_probs=122.8

Q ss_pred             cccccccCCcccEEEEEecCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCC
Q 021046          155 TQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       155 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      +.+.+|.|+++.||++.. +++.||||++...  .....+.+.+|+.+++.++||||+++++++..++..+++|||+++|
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            344555556666666554 6889999998754  3445678999999999999999999999999999999999999999


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +|..++... ....+++.....++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||.+..+.
T Consensus        85 ~l~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~  152 (314)
T cd08216          85 SCEDLLKTH-FPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMI  152 (314)
T ss_pred             CHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeec
Confidence            999988543 2345788899999999999999999987   9999999999999999999999999997654


No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.90  E-value=5.3e-23  Score=183.79  Aligned_cols=149  Identities=31%  Similarity=0.459  Sum_probs=127.5

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEe-cCeeE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE-QGENI  223 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~  223 (318)
                      ..+++|+..+.||+|+||.||++... ++..||+|++...  .......+..|+.++..++|||++++.+++.. .+..+
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            35678999999999999999999754 6889999988642  22334678899999999999999999999876 45789


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++||+ +++|..++.    ...+++.....++.|++.||.|||+.+   ++||||+|+||++++++.+||+|||+++..
T Consensus        87 lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          87 FVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             EEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            999998 568887763    345788888899999999999999987   999999999999999999999999999865


Q ss_pred             c
Q 021046          304 G  304 (318)
Q Consensus       304 ~  304 (318)
                      .
T Consensus       159 ~  159 (328)
T cd07856         159 D  159 (328)
T ss_pred             C
Confidence            4


No 363
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90  E-value=1.1e-23  Score=188.33  Aligned_cols=163  Identities=26%  Similarity=0.353  Sum_probs=139.8

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccC--CCCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~--~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv  225 (318)
                      ....|++.++||+||.+.||++...+.+.+|+|++..  .+.+..+.|..|+..|.+|+ |.+|++|++|-..++.+|||
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            3457889999999999999999988888899987653  35667788999999999996 99999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||= ..+|..+|... ......| .+..++.||+.++.+.|+++   |||.||||.|+|+ -.|.+||+|||+|+.+..
T Consensus       439 mE~G-d~DL~kiL~k~-~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  439 MECG-DIDLNKILKKK-KSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLL-VKGRLKLIDFGIANAIQP  511 (677)
T ss_pred             eecc-cccHHHHHHhc-cCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEE-EeeeEEeeeechhcccCc
Confidence            9984 45888888433 2333345 67789999999999999988   9999999999998 678999999999999999


Q ss_pred             CccccccceeecC
Q 021046          306 DELQGNTKRIVGT  318 (318)
Q Consensus       306 ~~~~~~~~~~~Gt  318 (318)
                      |.........+||
T Consensus       512 DTTsI~kdsQvGT  524 (677)
T KOG0596|consen  512 DTTSIVKDSQVGT  524 (677)
T ss_pred             cccceeeccccCc
Confidence            8877777777887


No 364
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.90  E-value=2.8e-23  Score=181.37  Aligned_cols=148  Identities=31%  Similarity=0.427  Sum_probs=127.3

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEEEec
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      |.+.+.||+|+||.||+|... +++.|+||++..... .......+|+..+.+++ |||++++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            566789999999999999875 478899999875432 22234567999999999 999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                       +|+|.+++.... ...+++..+..++.|++.+|.|||+.+   ++|+||+|+||++++++.++|+|||+++....
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence             888988774332 346899999999999999999999987   99999999999999999999999999987654


No 365
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.90  E-value=5.3e-23  Score=182.19  Aligned_cols=150  Identities=34%  Similarity=0.511  Sum_probs=127.6

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      .+.|...+.||+|+||.||+|... ++..+|+|.+...   ......++.+|+.+++.++|||++++++++..++..++|
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   93 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence            345777789999999999999864 5788999988642   222345688899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+. |++...+...  ...+++..+..++.|++.||.|||+.+   ++||||+|+||+++.++.+||+|||++..+..
T Consensus        94 ~e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          94 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             EEccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence            99997 5776666332  345789999999999999999999887   99999999999999999999999999987654


No 366
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.90  E-value=1e-22  Score=179.13  Aligned_cols=149  Identities=19%  Similarity=0.299  Sum_probs=110.1

Q ss_pred             hcCCccccccccCCcccEEEEEecCC----cEEEEEEccCCCCcCHH-----------HHHHHHHHHhccCCCccceEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQSGQGLT-----------EFKNEMMLIAKLQHRHLVRLFG  214 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~----~~vavK~l~~~~~~~~~-----------~~~~e~~~l~~l~h~niv~l~~  214 (318)
                      .++|.+.+.||+|+||.||+|...++    ..+|+|...........           ....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            46799999999999999999987543    45666653322211111           1223334556778999999999


Q ss_pred             EEEecC----eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC
Q 021046          215 CCIEQG----ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM  290 (318)
Q Consensus       215 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~  290 (318)
                      ++....    ..++++|++.. ++.+.+.   .....++..+..++.|++.||.|||+.+   |+||||||+|||++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFK---RIKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHH---hhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence            877654    34677777643 4544442   1233577888999999999999999987   99999999999999999


Q ss_pred             CceEeecccceeecC
Q 021046          291 NPKISDFGMARIFGG  305 (318)
Q Consensus       291 ~~ki~DfGla~~~~~  305 (318)
                      .++|+|||+|+.+..
T Consensus       164 ~~~l~DFGla~~~~~  178 (294)
T PHA02882        164 RGYIIDYGIASHFII  178 (294)
T ss_pred             cEEEEEcCCceeecc
Confidence            999999999987753


No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.90  E-value=1.1e-22  Score=180.58  Aligned_cols=145  Identities=32%  Similarity=0.485  Sum_probs=124.6

Q ss_pred             CccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          153 FSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      |...+.||+|+||.||+|.. .++..|++|.+.....   .....+.+|+.+++.++|||++++++++.+++..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            66667899999999999986 4588999998864322   2335688899999999999999999999999999999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +. |+|.+++..  ....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++...
T Consensus       103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            96 567666532  2346899999999999999999999987   999999999999999999999999998654


No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.90  E-value=6.1e-23  Score=184.46  Aligned_cols=146  Identities=28%  Similarity=0.442  Sum_probs=124.2

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecC------
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG------  220 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------  220 (318)
                      .++|...+.||+|+||.||+|.. .+++.||+|++....  ......+.+|+.++..++||||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            46899999999999999999986 468999999986532  223456889999999999999999999987543      


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      ..++|+||+.. +|..+.     ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++
T Consensus        94 ~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence            45899999964 665554     235889999999999999999999987   999999999999999999999999999


Q ss_pred             eeec
Q 021046          301 RIFG  304 (318)
Q Consensus       301 ~~~~  304 (318)
                      +...
T Consensus       165 ~~~~  168 (342)
T cd07879         165 RHAD  168 (342)
T ss_pred             cCCC
Confidence            8653


No 369
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.90  E-value=1.1e-23  Score=167.01  Aligned_cols=158  Identities=28%  Similarity=0.415  Sum_probs=132.0

Q ss_pred             HHHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCC-CCcCHHHHHHHHHHHhc-cCCCccceEEEEEEecCee
Q 021046          146 VSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAK-LQHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       146 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~  222 (318)
                      ++...++....+.||+|++|.|-+-++ .+|...|+|++... ..+...+.++|+.+..+ ...|.+|.++|........
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            445566777788999999999988865 67999999999754 33455677888886655 4799999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          223 ILIYEYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      |+.||.|+ .||+.+-... ..+...++...-+|+..+..||.|||++-  .+||||+||+|||++.+|++||+|||++-
T Consensus       121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG  197 (282)
T KOG0984|consen  121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG  197 (282)
T ss_pred             EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence            99999994 5777765322 34677899999999999999999999864  69999999999999999999999999998


Q ss_pred             eecCC
Q 021046          302 IFGGD  306 (318)
Q Consensus       302 ~~~~~  306 (318)
                      .+.++
T Consensus       198 ~L~dS  202 (282)
T KOG0984|consen  198 YLVDS  202 (282)
T ss_pred             eehhh
Confidence            88654


No 370
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.89  E-value=5.2e-23  Score=183.82  Aligned_cols=141  Identities=25%  Similarity=0.307  Sum_probs=121.6

Q ss_pred             cccccC--CcccEEEEEe-cCCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEG--GFGPVYKGRL-LNGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G--~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      ..||+|  +||+||++.. .+++.||+|.+....  ....+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            457776  8999999987 468999999986432  22346788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      ++|.+++.... ...+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.++++|||.+.
T Consensus        84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~  149 (328)
T cd08226          84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLY  149 (328)
T ss_pred             CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHh
Confidence            99998875432 345889999999999999999999887   9999999999999999999999998654


No 371
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.89  E-value=4.7e-23  Score=179.83  Aligned_cols=148  Identities=30%  Similarity=0.501  Sum_probs=128.5

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      |...+.||+|++|.||++... +++.+++|.+.....  .....+..|+.++++++|||++++++++..++..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456678999999999999864 688999998875432  24567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ++ +|..++...  ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||.+..+...
T Consensus        81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            75 787776432  357899999999999999999999987   999999999999999999999999999877654


No 372
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.89  E-value=5.2e-23  Score=181.12  Aligned_cols=152  Identities=26%  Similarity=0.410  Sum_probs=125.7

Q ss_pred             HhcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCC-cCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv  225 (318)
                      ..++|+..+.||+|+||.||+|...+ ++.||||.++.... ....++..|+.++.+.. ||||+++++++.++...+++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            34678889999999999999998864 88999999875432 23445677777676665 99999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |||+++ +|..++..  ....+++..+..++.|++.||.|||+..  +|+||||+|+||++++++.+||+|||++..+..
T Consensus        93 ~e~~~~-~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~  167 (296)
T cd06618          93 MELMST-CLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD  167 (296)
T ss_pred             eeccCc-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence            999854 66665532  2347899999999999999999999742  399999999999999999999999999986643


No 373
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.89  E-value=3.3e-23  Score=186.18  Aligned_cols=147  Identities=27%  Similarity=0.434  Sum_probs=126.0

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEec---------
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ---------  219 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------  219 (318)
                      ..+|...+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            36789999999999999999976 45889999998766556667889999999999999999999776543         


Q ss_pred             -----CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCce
Q 021046          220 -----GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPK  293 (318)
Q Consensus       220 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~k  293 (318)
                           ...++||||++ ++|..++.    ...+++.....++.|++.||.|||+.+   ++||||||+||+++. ++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence                 35789999997 58877762    335889999999999999999999987   999999999999974 56789


Q ss_pred             Eeecccceeec
Q 021046          294 ISDFGMARIFG  304 (318)
Q Consensus       294 i~DfGla~~~~  304 (318)
                      |+|||+++.+.
T Consensus       156 l~dfg~~~~~~  166 (342)
T cd07854         156 IGDFGLARIVD  166 (342)
T ss_pred             ECCcccceecC
Confidence            99999998764


No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.89  E-value=6.6e-23  Score=175.65  Aligned_cols=141  Identities=30%  Similarity=0.417  Sum_probs=125.6

Q ss_pred             cccCCcccEEEEEec-CCcEEEEEEccCCCC---cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          159 LGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG---QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      ||+|+||.||++... +++.+++|.+.....   .....+..|+.+++.++|||++++++.+..++..+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999875 488999998875432   2455789999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      .+++..   ...+++.....++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123          81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            998843   346899999999999999999999977   99999999999999999999999999987654


No 375
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.89  E-value=1.3e-22  Score=177.31  Aligned_cols=149  Identities=34%  Similarity=0.530  Sum_probs=124.0

Q ss_pred             CccccccccCCcccEEEEEecC-CcEEEEEEccCCCC--cCHHHHHHHHHHHhcc---CCCccceEEEEEEecCe-----
Q 021046          153 FSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSG--QGLTEFKNEMMLIAKL---QHRHLVRLFGCCIEQGE-----  221 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~-----  221 (318)
                      |+..+.||+|+||.||+|.... ++.+|+|++.....  .....+.+|+.++.++   +|||++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5667899999999999998764 88999999874322  2234566787776655   69999999999998776     


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      .+++|||+++ +|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++.
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence            8999999974 7887774322 235899999999999999999999987   9999999999999999999999999998


Q ss_pred             eecCC
Q 021046          302 IFGGD  306 (318)
Q Consensus       302 ~~~~~  306 (318)
                      .+...
T Consensus       156 ~~~~~  160 (287)
T cd07838         156 IYSFE  160 (287)
T ss_pred             eccCC
Confidence            87543


No 376
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89  E-value=1.2e-23  Score=190.64  Aligned_cols=148  Identities=24%  Similarity=0.381  Sum_probs=127.3

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC---CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS---GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ...|-.++.||-|+||+|.++.- .+...+|.|.|++.+   .......+.|-.+|+..+.+=||+|+-.|.+++.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            34566778999999999999964 445678999987653   23445678899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |||++||++-.+|   .....+++..+..++..+.+|+++.|.-|   +|||||||+|||||.+|++||+||||+.=+
T Consensus       708 MdYIPGGDmMSLL---IrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLL---IRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             EeccCCccHHHHH---HHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccc
Confidence            9999999998877   34567888888888889999999999877   999999999999999999999999998533


No 377
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.89  E-value=4.7e-23  Score=179.70  Aligned_cols=147  Identities=33%  Similarity=0.498  Sum_probs=128.9

Q ss_pred             CccccccccCCcccEEEEEec-CCcEEEEEEccCCC--CcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          153 FSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      |+..+.||+|+||.||+|... +++.+|+|.+....  ......+..|+.++++++|||++++++++...+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            456678999999999999875 48899999987643  334567889999999999999999999999999999999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      + ++|.+++...  ...+++..+..++.|++.||.|||+++   |+||||+|+||++++++.++|+|||+++....
T Consensus        81 ~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          81 D-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             C-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence            8 5898888532  246899999999999999999999987   99999999999999999999999999987654


No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.89  E-value=9.6e-23  Score=190.76  Aligned_cols=169  Identities=27%  Similarity=0.434  Sum_probs=141.7

Q ss_pred             HHHHHHHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEe--
Q 021046          143 LASVSAATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIE--  218 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--  218 (318)
                      +..+..+++.|++.+.||+|.+|+||+++. ++++.+|+|++... ....++...|..+++.. +|||++.++|++..  
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            333445678899999999999999999974 56888999988764 34456778888888887 59999999999974  


Q ss_pred             ---cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEe
Q 021046          219 ---QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       219 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                         ++.+|||||||.+||.-++...-. ...+.|....+|...++.|+.+||...   ++|||||-.|||++.++.+|+.
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEe
Confidence               468999999999999999886544 778999999999999999999999876   9999999999999999999999


Q ss_pred             ecccceeecCCccccccceeecC
Q 021046          296 DFGMARIFGGDELQGNTKRIVGT  318 (318)
Q Consensus       296 DfGla~~~~~~~~~~~~~~~~Gt  318 (318)
                      |||++..+.....+  ..+.+||
T Consensus       166 DFGvSaQldsT~gr--RnT~iGt  186 (953)
T KOG0587|consen  166 DFGVSAQLDSTVGR--RNTFIGT  186 (953)
T ss_pred             eeeeeeeeeccccc--ccCcCCC
Confidence            99999988654433  3345665


No 379
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.89  E-value=5.3e-23  Score=182.02  Aligned_cols=150  Identities=33%  Similarity=0.502  Sum_probs=126.0

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecC------
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG------  220 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------  220 (318)
                      .++|.+.++||+|+||.||+|... +++.+|+|++.....  .....+.+|+.++.+++||||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            578999999999999999999864 578999998864322  22346788999999999999999999876543      


Q ss_pred             --eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          221 --ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       221 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                        ..++|+||++. +|...+..  ....+++..+..++.|+++||.|||+.+   |+|+||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence              45999999875 56555532  2446899999999999999999999987   9999999999999999999999999


Q ss_pred             cceeecC
Q 021046          299 MARIFGG  305 (318)
Q Consensus       299 la~~~~~  305 (318)
                      +++....
T Consensus       161 ~~~~~~~  167 (311)
T cd07866         161 LARPYDG  167 (311)
T ss_pred             cchhccC
Confidence            9987654


No 380
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.89  E-value=5.1e-23  Score=180.35  Aligned_cols=152  Identities=29%  Similarity=0.434  Sum_probs=124.7

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCCC-CcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++|...+.||+|+||.||++... +++.+|+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++||
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            45666789999999999999764 57899999987532 234457889999999996 9999999999999999999999


Q ss_pred             eccCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFY--PKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |++. ++..+...  ......+++.....++.|++.||+|||+..  +++||||||+||+++.++.+||+|||+++.+..
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  160 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD  160 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence            9864 54443211  122356899999999999999999999752  399999999999999999999999999976543


No 381
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=7.7e-24  Score=183.42  Aligned_cols=163  Identities=29%  Similarity=0.339  Sum_probs=131.6

Q ss_pred             HHhcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcC---HHHHHHHHHHHhcc-CCCccceEEEEEEecCee
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQG---LTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~---~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~  222 (318)
                      ....+|..+.+||+|+||+|.+|+.++ .+.+|||++++....+   .+--+.|-++|+-. +-|.+++|+.+|++.+.+
T Consensus       346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL  425 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL  425 (683)
T ss_pred             eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence            445678888999999999999997654 5679999998753322   22234566666655 578999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      |+||||+.+|+|--.+   ..-..+.+..+..+|..||-||-|||+++   ||.||||.+||++|.+|++||+||||++.
T Consensus       426 yFVMEyvnGGDLMyhi---QQ~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKE  499 (683)
T KOG0696|consen  426 YFVMEYVNGGDLMYHI---QQVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE  499 (683)
T ss_pred             eeEEEEecCchhhhHH---HHhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccc
Confidence            9999999999996666   23445677788889999999999999998   99999999999999999999999999985


Q ss_pred             ecCCccccccceeecC
Q 021046          303 FGGDELQGNTKRIVGT  318 (318)
Q Consensus       303 ~~~~~~~~~~~~~~Gt  318 (318)
                      ---+.  ..|++++||
T Consensus       500 ni~~~--~TTkTFCGT  513 (683)
T KOG0696|consen  500 NIFDG--VTTKTFCGT  513 (683)
T ss_pred             cccCC--cceeeecCC
Confidence            43333  235677887


No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.89  E-value=9.2e-23  Score=175.99  Aligned_cols=150  Identities=31%  Similarity=0.444  Sum_probs=124.0

Q ss_pred             CCccccccccCCcccEEEEEecC-CcEEEEEEccCC-----CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ-----SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  225 (318)
                      +|.+.+.||+|+||.||++.... +..+++|.++..     .......+..|+.+++.++|||++++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            47788999999999999997643 344555554431     122334567899999999999999999999999999999


Q ss_pred             EEeccCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          226 YEYMPNKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      |||+++++|..++... .....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++ +.+||+|||+++.+.
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999887532 23457899999999999999999999987   999999999999975 569999999998764


Q ss_pred             C
Q 021046          305 G  305 (318)
Q Consensus       305 ~  305 (318)
                      .
T Consensus       157 ~  157 (260)
T cd08222         157 G  157 (260)
T ss_pred             C
Confidence            3


No 383
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.88  E-value=8.5e-23  Score=183.58  Aligned_cols=149  Identities=28%  Similarity=0.429  Sum_probs=128.0

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCe----
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE----  221 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----  221 (318)
                      ..++|...+.||+|+||.||+|... +++.||+|++...  .......+.+|+.+++.++|||++++++++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4578999999999999999999874 5789999988643  22234567789999999999999999998876654    


Q ss_pred             --eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          222 --NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       222 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                        .++|+||+ +++|.+++.    ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~----~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVK----CQKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccc
Confidence              89999998 568888773    246899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeecC
Q 021046          300 ARIFGG  305 (318)
Q Consensus       300 a~~~~~  305 (318)
                      +..+..
T Consensus       165 ~~~~~~  170 (343)
T cd07851         165 ARHTDD  170 (343)
T ss_pred             cccccc
Confidence            987643


No 384
>PRK10345 hypothetical protein; Provisional
Probab=99.88  E-value=3.2e-22  Score=165.73  Aligned_cols=138  Identities=22%  Similarity=0.324  Sum_probs=106.7

Q ss_pred             ccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-----CCCccceEEEEEEecC---eeE-E
Q 021046          154 STQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-----QHRHLVRLFGCCIEQG---ENI-L  224 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~-l  224 (318)
                      ...+.||+|+||.||.  ++.....+||++........+.+.+|+..+..+     +||||++++|++.++.   ..+ +
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            3456899999999996  443333479988765445567899999999999     5799999999999874   333 7


Q ss_pred             EEEe--ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCEEEcC----CCCceEee-
Q 021046          225 IYEY--MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGL-LYLHQYSRLRIIHRDLKASNILLDS----DMNPKISD-  296 (318)
Q Consensus       225 v~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~yLH~~~~~~ivH~Dlk~~Nill~~----~~~~ki~D-  296 (318)
                      |+||  +++|+|.+++..    ..+++.  ..++.|++.++ +|||+++   |+||||||+|||++.    +..++|+| 
T Consensus        83 I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            8999  568999999932    235544  35677888777 9999988   999999999999974    34799999 


Q ss_pred             ccccee
Q 021046          297 FGMARI  302 (318)
Q Consensus       297 fGla~~  302 (318)
                      ||.+..
T Consensus       154 ~G~~~~  159 (210)
T PRK10345        154 IGESTF  159 (210)
T ss_pred             CCCcce
Confidence            554444


No 385
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.88  E-value=1.7e-23  Score=168.41  Aligned_cols=146  Identities=22%  Similarity=0.448  Sum_probs=126.4

Q ss_pred             HhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-CCccceEEEEEEecC--eeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQG--ENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~l  224 (318)
                      ..++|++.+++|+|.|+.||.|. ..+.+.++||.++..   ..+.+.+|+.+|..|. ||||++|++...++.  ...|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            46789999999999999999996 466788999999764   3357889999999998 999999999988764  4579


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeecccceee
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARIF  303 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla~~~  303 (318)
                      ++||+++.+.....      ..++..++..++.+++.||.|+|+.|   |+|||+||.|++||... .++|+|+|||.++
T Consensus       113 iFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             HhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhc
Confidence            99999998876544      45677788899999999999999998   99999999999998754 6999999999988


Q ss_pred             cCC
Q 021046          304 GGD  306 (318)
Q Consensus       304 ~~~  306 (318)
                      .+.
T Consensus       184 Hp~  186 (338)
T KOG0668|consen  184 HPG  186 (338)
T ss_pred             CCC
Confidence            654


No 386
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=6.3e-23  Score=173.63  Aligned_cols=162  Identities=25%  Similarity=0.377  Sum_probs=133.1

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~  223 (318)
                      ...+|.+.+.||+|+|.+|..++++ +.+.+|+|++++.   ..+..+=.+.|-.++... +||.+|.|+.+|.+...++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            4568999999999999999999874 5678999988753   223333445565555554 7999999999999999999


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +|.||+++|+|--.+   ...+.++++-+..+...|..||.|||+++   ||.||||.+|||+|..|++|++|||+++.-
T Consensus       328 fvieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC
Confidence            999999999985444   45667899888889999999999999998   999999999999999999999999999853


Q ss_pred             cCCccccccceeecC
Q 021046          304 GGDELQGNTKRIVGT  318 (318)
Q Consensus       304 ~~~~~~~~~~~~~Gt  318 (318)
                      -.+  ...+++++||
T Consensus       402 l~~--gd~tstfcgt  414 (593)
T KOG0695|consen  402 LGP--GDTTSTFCGT  414 (593)
T ss_pred             CCC--CcccccccCC
Confidence            322  2346677887


No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88  E-value=1.6e-24  Score=176.59  Aligned_cols=150  Identities=29%  Similarity=0.554  Sum_probs=121.2

Q ss_pred             hcCCccccccccCCcccEEEEEec-CCcEEEEEEccC--CCCcCHHHHHHHHHHHhccCCCccceEEEEEEec-------
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQ-------  219 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------  219 (318)
                      .+.|+...+||+|.||.||+|+.. +++.||+|+.--  .....-....+|+.+|..++|+|++.++..|...       
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            456777789999999999999764 477889886532  2222234568899999999999999999988643       


Q ss_pred             -CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecc
Q 021046          220 -GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFG  298 (318)
Q Consensus       220 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfG  298 (318)
                       ...++|+.+++. +|.-.|.  .....++..++..++.++..||.|+|...   |+|||+||+|+||+.++.+||+|||
T Consensus        96 r~t~ylVf~~ceh-DLaGlLs--n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFG  169 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLS--NRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFG  169 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhc--CccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccc
Confidence             247999999976 5555552  23456888999999999999999999876   9999999999999999999999999


Q ss_pred             cceeecC
Q 021046          299 MARIFGG  305 (318)
Q Consensus       299 la~~~~~  305 (318)
                      +|+.+.-
T Consensus       170 lar~fs~  176 (376)
T KOG0669|consen  170 LARAFST  176 (376)
T ss_pred             cccceec
Confidence            9987753


No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.88  E-value=2.9e-22  Score=170.75  Aligned_cols=133  Identities=20%  Similarity=0.154  Sum_probs=114.5

Q ss_pred             CCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChhhhhhc
Q 021046          162 GGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFY  240 (318)
Q Consensus       162 G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  240 (318)
                      |.||.||++.. .+++.+|+|++....     .+..|...+....|||++++++++.+.+..+++|||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            89999999976 468899999987542     234455555566799999999999999999999999999999988843


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          241 PKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       241 ~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                         ...+++.....++.|++.||.|||+.+   ++||||||+||+++.++.++++|||++..+..
T Consensus        79 ---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~  137 (237)
T cd05576          79 ---FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVED  137 (237)
T ss_pred             ---hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccc
Confidence               335899999999999999999999987   99999999999999999999999998866543


No 389
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88  E-value=3.1e-24  Score=176.89  Aligned_cols=155  Identities=26%  Similarity=0.413  Sum_probs=127.0

Q ss_pred             CCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCC--cCHHHHHHHHHHHhccCCCccceEEEEEEecC-----eeE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG-----ENI  223 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~  223 (318)
                      +.+..+.||-|+||.||..++ ++|+.||.|++.+.-.  ...+.+.+|+.+|...+|.|++..++...-..     +.|
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            455668999999999999976 5799999999876422  23467889999999999999999988776443     567


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      +++|.|. .+|.+.+.   +...++..-..-+..||++||+|||+.+   |.||||||.|.|++++..+||+|||||+.-
T Consensus       134 V~TELmQ-SDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  134 VLTELMQ-SDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTW  206 (449)
T ss_pred             HHHHHHH-hhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEeccccccccc
Confidence            8888885 46777763   3456777777888999999999999987   999999999999999999999999999987


Q ss_pred             cCCccccccc
Q 021046          304 GGDELQGNTK  313 (318)
Q Consensus       304 ~~~~~~~~~~  313 (318)
                      ..++...++.
T Consensus       207 e~d~~~hMTq  216 (449)
T KOG0664|consen  207 DQRDRLNMTH  216 (449)
T ss_pred             chhhhhhhHH
Confidence            7666554443


No 390
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.88  E-value=4.9e-24  Score=174.94  Aligned_cols=153  Identities=28%  Similarity=0.400  Sum_probs=125.4

Q ss_pred             cCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCC-CcCHHHHHHHHHHHh-ccCCCccceEEEEEEecCeeEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQS-GQGLTEFKNEMMLIA-KLQHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++.+....||.|+||.|++..+ +.|+..|||+++... ....++++.|.+... +-+.||||+++|.+..++.-|+.||
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            4455567899999999999976 569999999998543 355678888888554 4578999999999999999999999


Q ss_pred             eccCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          228 YMPNKSLDVFLFY--PKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       228 ~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      .|+ .||+.+...  ......+++...-.|......||.||-..  +.|||||+||+|||++..|.+||+|||++-.+.+
T Consensus       144 LMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  144 LMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             HHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence            995 467665432  23456788888888999999999999874  4699999999999999999999999999877654


Q ss_pred             C
Q 021046          306 D  306 (318)
Q Consensus       306 ~  306 (318)
                      +
T Consensus       221 S  221 (361)
T KOG1006|consen  221 S  221 (361)
T ss_pred             H
Confidence            3


No 391
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.87  E-value=1.6e-21  Score=163.94  Aligned_cols=149  Identities=36%  Similarity=0.522  Sum_probs=131.9

Q ss_pred             CccccccccCCcccEEEEEecC-CcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEecc
Q 021046          153 FSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      |...+.||+|++|.||++...+ ++.+++|.+...... ..+.+.+|+..+.+++|+|++++++++...+..++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4566889999999999998765 889999999865444 56789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++|.+++.....  .+++.....++.+++.++.|||+.+   ++|+|++|.||+++.++.++|+|||++..+...
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            9999998843221  1789999999999999999999986   999999999999999999999999999887654


No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.87  E-value=5.1e-22  Score=188.28  Aligned_cols=149  Identities=25%  Similarity=0.307  Sum_probs=106.0

Q ss_pred             HhcCCccccccccCCcccEEEEEecC-----CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEE------EE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGC------CI  217 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~  217 (318)
                      ..++|...+.||+|+||.||+|.+.+     +..||||++......  +....|  .+....+.++..+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            56789999999999999999998744     689999987643211  111111  1122222333222211      24


Q ss_pred             ecCeeEEEEEeccCCChhhhhhcCCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 021046          218 EQGENILIYEYMPNKSLDVFLFYPKK-----------------KRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLK  280 (318)
Q Consensus       218 ~~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk  280 (318)
                      .+...++||||+++++|.+++.....                 ........+..++.|++.||.|||+++   |+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence            56688999999999999888753211                 001123345678999999999999987   9999999


Q ss_pred             CCCEEEcC-CCCceEeecccceeec
Q 021046          281 ASNILLDS-DMNPKISDFGMARIFG  304 (318)
Q Consensus       281 ~~Nill~~-~~~~ki~DfGla~~~~  304 (318)
                      |+|||++. ++.+||+|||+|+.+.
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccc
Confidence            99999986 5799999999998664


No 393
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.87  E-value=9.1e-23  Score=168.18  Aligned_cols=154  Identities=26%  Similarity=0.389  Sum_probs=124.4

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCC-cCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv  225 (318)
                      ..++.+.+..||.|+.|.|++++.. +|..+|||.+.+... +..++++..+.++..- +.|.||+.+|+|..+...++.
T Consensus        90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic  169 (391)
T KOG0983|consen   90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC  169 (391)
T ss_pred             ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence            3455666778999999999999874 588999999876433 3445677777765554 489999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||.|.- -++.++..  ...++++..+-++...+..||.||-+++  .|+|||+||+|||+|+.|++|++|||++-.+.+
T Consensus       170 MelMs~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd  244 (391)
T KOG0983|consen  170 MELMST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD  244 (391)
T ss_pred             HHHHHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec
Confidence            999853 34444432  3456888888899999999999999865  699999999999999999999999999977765


Q ss_pred             Cc
Q 021046          306 DE  307 (318)
Q Consensus       306 ~~  307 (318)
                      ..
T Consensus       245 Sk  246 (391)
T KOG0983|consen  245 SK  246 (391)
T ss_pred             cc
Confidence            43


No 394
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86  E-value=3.6e-21  Score=160.13  Aligned_cols=143  Identities=14%  Similarity=0.103  Sum_probs=116.7

Q ss_pred             HHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHH---------HHHHHHHHhccCCCccceEEEEEEe
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTE---------FKNEMMLIAKLQHRHLVRLFGCCIE  218 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~---------~~~e~~~l~~l~h~niv~l~~~~~~  218 (318)
                      ...++|...+.+|.|+||.||+... ++..+|||.+.+........         +.+|+..+.++.||+|..+..++..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            3467899999999999999999766 57789999997543332222         6899999999999999999988664


Q ss_pred             c--------CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC
Q 021046          219 Q--------GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM  290 (318)
Q Consensus       219 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~  290 (318)
                      .        +..+++|||++|.+|.++..       ++.    ....+++.+|..+|..+   ++|||++|+||++++++
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g  172 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence            3        35789999999999977641       222    24568999999999988   99999999999999988


Q ss_pred             CceEeecccceeecCC
Q 021046          291 NPKISDFGMARIFGGD  306 (318)
Q Consensus       291 ~~ki~DfGla~~~~~~  306 (318)
                       ++|+|||..+....+
T Consensus       173 -i~liDfg~~~~~~e~  187 (232)
T PRK10359        173 -LRIIDLSGKRCTAQR  187 (232)
T ss_pred             -EEEEECCCcccccch
Confidence             999999998876433


No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.86  E-value=1.6e-20  Score=155.51  Aligned_cols=143  Identities=39%  Similarity=0.634  Sum_probs=126.7

Q ss_pred             cccCCcccEEEEEecC-CcEEEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChhh
Q 021046          159 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDV  236 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~  236 (318)
                      ||+|.+|.||++...+ ++.+++|++...... ..+.+.+|+..+..++|++++++++++......++++||+++++|..
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999998754 889999999864332 35689999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-CCCceEeecccceeecCC
Q 021046          237 FLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIFGGD  306 (318)
Q Consensus       237 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~~~~  306 (318)
                      ++....  ..+++..+..++.++++++.|||+.+   ++|+||+|.||+++. ++.++|+|||.+......
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            884321  46889999999999999999999987   999999999999999 899999999999877543


No 396
>smart00090 RIO RIO-like kinase.
Probab=99.86  E-value=4.7e-21  Score=162.48  Aligned_cols=154  Identities=18%  Similarity=0.142  Sum_probs=116.7

Q ss_pred             HHHHHHHhcCCccccccccCCcccEEEEE--ecCCcEEEEEEccCCCCc------------------------CHHHHHH
Q 021046          143 LASVSAATENFSTQCKLGEGGFGPVYKGR--LLNGQEVAVKRLSNQSGQ------------------------GLTEFKN  196 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~--~~~~~~vavK~l~~~~~~------------------------~~~~~~~  196 (318)
                      ..++......|.+.+.||+|+||.||+|.  ..+|+.||+|.++.....                        ....+..
T Consensus        20 ~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (237)
T smart00090       20 LYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEK   99 (237)
T ss_pred             HHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHH
Confidence            33344444568888999999999999998  568999999988753210                        0123568


Q ss_pred             HHHHHhccCCC--ccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 021046          197 EMMLIAKLQHR--HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI  274 (318)
Q Consensus       197 e~~~l~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~i  274 (318)
                      |+..+.++.+.  .+++.++.    ...++||||+++++|.....   ....+.......++.|++.++.|||+.+  .+
T Consensus       100 E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~i  170 (237)
T smart00090      100 EFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKEG--EL  170 (237)
T ss_pred             HHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhcC--CE
Confidence            99999999753  34445443    24589999999988866542   1234555667789999999999999875  39


Q ss_pred             eecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          275 IHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       275 vH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +||||||+||+++ ++.++|+|||+|...+..
T Consensus       171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~  201 (237)
T smart00090      171 VHGDLSEYNILVH-DGKVVIIDVSQSVELDHP  201 (237)
T ss_pred             EeCCCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence            9999999999999 889999999999976554


No 397
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.85  E-value=4.9e-23  Score=182.41  Aligned_cols=161  Identities=24%  Similarity=0.335  Sum_probs=138.2

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCc-EEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQ-EVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~-~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  224 (318)
                      ...+++.+..||-|+||.|=+....+.. .+|+|.+++.   +..+.+....|-.+|...+.|.||+||..|.++...|+
T Consensus       418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm  497 (732)
T KOG0614|consen  418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM  497 (732)
T ss_pred             chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence            3456677778999999999998775433 3788888754   33445567889999999999999999999999999999


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +||-|-||.|...|   +....++..+...++..+.+|++|||.++   ||.|||||+|.+++.+|-+||.|||+|+.++
T Consensus       498 LmEaClGGElWTiL---rdRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~  571 (732)
T KOG0614|consen  498 LMEACLGGELWTIL---RDRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIG  571 (732)
T ss_pred             hHHhhcCchhhhhh---hhcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhc
Confidence            99999999999998   45667888888899999999999999988   9999999999999999999999999999997


Q ss_pred             CCccccccceeecC
Q 021046          305 GDELQGNTKRIVGT  318 (318)
Q Consensus       305 ~~~~~~~~~~~~Gt  318 (318)
                      .++   .|-+++||
T Consensus       572 ~g~---KTwTFcGT  582 (732)
T KOG0614|consen  572 SGR---KTWTFCGT  582 (732)
T ss_pred             cCC---ceeeecCC
Confidence            655   35567887


No 398
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.85  E-value=8.7e-21  Score=158.75  Aligned_cols=136  Identities=19%  Similarity=0.271  Sum_probs=114.3

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCc--------CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ--------GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      +.||+|++|.||+|.. .+..+++|........        ....+.+|+.++..++|++++....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 6678999976543221        123577899999999999998888888888889999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +++++|.+++...      .+ .+..++.+++.+|.++|+.+   ++|+|++|.||+++ ++.++|+|||+++...
T Consensus        81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            9999999887321      12 77889999999999999987   99999999999999 8899999999998643


No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.85  E-value=1.4e-22  Score=184.71  Aligned_cols=163  Identities=27%  Similarity=0.451  Sum_probs=142.1

Q ss_pred             HHhcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      .+.++|+....+|.|+||.||+++. .+++..|+|.++-.......-..+|+.+++..+||||+.++|-+...+..|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            3567899999999999999999986 468899999998777777778889999999999999999999999999999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      ||+.+|+|.+.-+   -..++++.+..++.+...+|++|||+.+   -+|||||=.|||+++.+.+|++|||.+..++.-
T Consensus        92 EycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat  165 (829)
T KOG0576|consen   92 EYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT  165 (829)
T ss_pred             EecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh
Confidence            9999999988763   3567888899999999999999999988   899999999999999999999999999877643


Q ss_pred             ccccccceeecC
Q 021046          307 ELQGNTKRIVGT  318 (318)
Q Consensus       307 ~~~~~~~~~~Gt  318 (318)
                      -.  ....++||
T Consensus       166 i~--KrksfiGt  175 (829)
T KOG0576|consen  166 IA--KRKSFIGT  175 (829)
T ss_pred             hh--hhhcccCC
Confidence            22  23345565


No 400
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.85  E-value=4.9e-22  Score=165.71  Aligned_cols=147  Identities=25%  Similarity=0.331  Sum_probs=119.8

Q ss_pred             HhcCCccc-cccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEe----cCe
Q 021046          149 ATENFSTQ-CKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIE----QGE  221 (318)
Q Consensus       149 ~~~~~~~~-~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~  221 (318)
                      .+++|.+. ++||-|--|+|..+.. .+++.+|+|++...     ....+|+++--.. .|||||++++++..    ...
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            45667544 5799999999999965 56889999998642     2346677765444 59999999999864    356


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC---CCCceEeecc
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---DMNPKISDFG  298 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~---~~~~ki~DfG  298 (318)
                      +++|||.|+||.|...+.. +....+++.++..|+.||+.|+.|||+..   |.||||||+|+|.+.   +-.+||+|||
T Consensus       134 LLiVmE~meGGeLfsriq~-~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQD-RGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eEeeeecccchHHHHHHHH-cccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence            7899999999999877743 23557999999999999999999999987   999999999999865   4469999999


Q ss_pred             cceeec
Q 021046          299 MARIFG  304 (318)
Q Consensus       299 la~~~~  304 (318)
                      +|+.-.
T Consensus       210 FAK~t~  215 (400)
T KOG0604|consen  210 FAKETQ  215 (400)
T ss_pred             cccccC
Confidence            999765


No 401
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85  E-value=4.2e-21  Score=155.74  Aligned_cols=152  Identities=23%  Similarity=0.390  Sum_probs=127.1

Q ss_pred             HHhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCC-CccceEEEEEEecCeeEEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH-RHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv  225 (318)
                      .....|.++++||.|+||.+|.|. ..+|..||||.-+.....  ..+.-|..+...|++ ..|..+..+..+.+...+|
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV   89 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV   89 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence            346789999999999999999996 467999999987654322  356778889888976 7888888999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC---CCceEeeccccee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD---MNPKISDFGMARI  302 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~---~~~ki~DfGla~~  302 (318)
                      ||.+ +-+|.+....  -.+.++.++.+-++-|++.-++|+|.++   +|||||||+|+|+.-+   ..+.++|||||+.
T Consensus        90 MdLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen   90 MDLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             eecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhh
Confidence            9988 6688776643  2456888999999999999999999988   9999999999999654   4589999999998


Q ss_pred             ecCCc
Q 021046          303 FGGDE  307 (318)
Q Consensus       303 ~~~~~  307 (318)
                      +-+..
T Consensus       164 y~d~~  168 (341)
T KOG1163|consen  164 YRDIR  168 (341)
T ss_pred             hcccc
Confidence            86543


No 402
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.85  E-value=1.6e-20  Score=159.36  Aligned_cols=138  Identities=33%  Similarity=0.461  Sum_probs=123.7

Q ss_pred             CcccEEEEEec-CCcEEEEEEccCCCCcC-HHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChhhhhhc
Q 021046          163 GFGPVYKGRLL-NGQEVAVKRLSNQSGQG-LTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFY  240 (318)
Q Consensus       163 ~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~  240 (318)
                      +||.||+|... +++.+++|++....... .+.+.+|+..+++++|+|++++++++..+...++++||+++++|..++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999876 48899999998655444 68899999999999999999999999999999999999999999998843


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          241 PKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       241 ~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      .   ..+++..+..++.+++.++.|||+.+   ++|+||+|+||++++++.++|+|||++......
T Consensus        81 ~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~  140 (244)
T smart00220       81 R---GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPG  140 (244)
T ss_pred             c---cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeeccc
Confidence            2   23889999999999999999999987   999999999999999999999999999887653


No 403
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.84  E-value=1.7e-20  Score=155.43  Aligned_cols=141  Identities=19%  Similarity=0.175  Sum_probs=110.7

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCc----------------------CHHHHHHHHHHHhccCCC
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ----------------------GLTEFKNEMMLIAKLQHR  207 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~----------------------~~~~~~~e~~~l~~l~h~  207 (318)
                      ...|...+.||+|+||.||++...+|+.||||++......                      ....+..|..++..+.|+
T Consensus        14 ~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   93 (198)
T cd05144          14 GVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE   93 (198)
T ss_pred             CchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence            3347778899999999999999888999999986542210                      011356788888888887


Q ss_pred             --ccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 021046          208 --HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNIL  285 (318)
Q Consensus       208 --niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nil  285 (318)
                        .+++.++    ....++||||+++++|......         .....++.+++.++.++|+.+   ++||||||+||+
T Consensus        94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nil  157 (198)
T cd05144          94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNIL  157 (198)
T ss_pred             CCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEE
Confidence              4455544    2456899999999998765410         234578899999999999977   999999999999


Q ss_pred             EcCCCCceEeecccceeecCC
Q 021046          286 LDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       286 l~~~~~~ki~DfGla~~~~~~  306 (318)
                      +++++.++|+|||+|..+..+
T Consensus       158 l~~~~~~~liDfg~~~~~~~~  178 (198)
T cd05144         158 VDDDEKIYIIDWPQMVSTDHP  178 (198)
T ss_pred             EcCCCcEEEEECCccccCCCc
Confidence            999999999999999776654


No 404
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.84  E-value=1.4e-20  Score=178.35  Aligned_cols=140  Identities=19%  Similarity=0.285  Sum_probs=113.7

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEE-ccCC-CC------cCHHHHHHHHHHHhccCCCccceEEEEEEecCe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKR-LSNQ-SG------QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGE  221 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~-l~~~-~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  221 (318)
                      ...|...+.||+|+||.||+|.+.+.. +++|+ ..+. ..      ...+++.+|+.++..++|++++....++...+.
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            344566789999999999999875544 33343 2221 11      123468899999999999999998888888888


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      .++||||+++++|.+++.           ....++.+++.+|.|||+.+   ++||||||+||++ +++.++|+|||+|+
T Consensus       411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~  475 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK  475 (535)
T ss_pred             CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence            899999999999988872           35678999999999999987   9999999999999 67899999999998


Q ss_pred             eecC
Q 021046          302 IFGG  305 (318)
Q Consensus       302 ~~~~  305 (318)
                      ....
T Consensus       476 ~~~~  479 (535)
T PRK09605        476 YSDL  479 (535)
T ss_pred             cCCc
Confidence            7543


No 405
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84  E-value=4e-20  Score=150.81  Aligned_cols=133  Identities=20%  Similarity=0.184  Sum_probs=105.8

Q ss_pred             cccccccCCcccEEEEEecCCcEEEEEEccCCCCcC----HHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEEEec
Q 021046          155 TQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG----LTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       155 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~----~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      ....|++|+||+||.+.. .+.+++.+.+.....-.    ...+.+|+.+|.+|. |+++++++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            456899999999998766 56778877776533211    125789999999995 5889999886    4569999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEEcCCCCceEeecccceeecC
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDL-KASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl-k~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +|.+|...+.    .     . ...++.|++.+|.++|.++   |+|||| ||.|||++.++.++|+|||+|.....
T Consensus        81 ~G~~L~~~~~----~-----~-~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         81 AGAAMYQRPP----R-----G-DLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             cCccHHhhhh----h-----h-hHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            9998864331    0     1 1357789999999999988   999999 79999999999999999999986543


No 406
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.84  E-value=3.4e-20  Score=153.72  Aligned_cols=132  Identities=20%  Similarity=0.318  Sum_probs=108.1

Q ss_pred             ccccCCcccEEEEEecCCcEEEEEEccCCCC-c-------CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEec
Q 021046          158 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-Q-------GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYM  229 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  229 (318)
                      .||+|+||.||+|.+ ++..+++|....... .       ...++.+|+.++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999986 567899998654221 1       1245778999999999988776666667777889999999


Q ss_pred             cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          230 PNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       230 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++++|.+.+...   .    .   .++.+++.+|.+||+.+   ++|+|++|.||+++ ++.++++|||+++...
T Consensus        80 ~g~~l~~~~~~~---~----~---~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        80 EGKPLKDVIEEG---N----D---ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CCccHHHHHhhc---H----H---HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence            999998876321   0    0   78999999999999987   99999999999999 8999999999998754


No 407
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.83  E-value=5.7e-21  Score=178.15  Aligned_cols=149  Identities=31%  Similarity=0.471  Sum_probs=118.4

Q ss_pred             CccccccccCCccc-EEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEEecc
Q 021046          153 FSTQCKLGEGGFGP-VYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       153 ~~~~~~lg~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      |...+.+|.|+-|+ ||+|.. +|++||||++-.   ...+-..+|+..|..- +|||||++++.-.++...|+..|.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            44557899999886 799988 678999999864   2334567899988877 59999999998888899999999995


Q ss_pred             CCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC---C--CCceEeecccceeec
Q 021046          231 NKSLDVFLFYP-KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS---D--MNPKISDFGMARIFG  304 (318)
Q Consensus       231 ~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~---~--~~~ki~DfGla~~~~  304 (318)
                       .+|.+++... .......-.....+..|++.||++||+.+   ||||||||.||||+.   +  ..++|+|||+++.+.
T Consensus       587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence             5899988553 11111111344677899999999999976   999999999999976   3  468999999999998


Q ss_pred             CCccc
Q 021046          305 GDELQ  309 (318)
Q Consensus       305 ~~~~~  309 (318)
                      .+...
T Consensus       663 ~~~sS  667 (903)
T KOG1027|consen  663 GGKSS  667 (903)
T ss_pred             CCcch
Confidence            77543


No 408
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.83  E-value=3.1e-21  Score=166.28  Aligned_cols=159  Identities=25%  Similarity=0.383  Sum_probs=133.4

Q ss_pred             HHHHHHhcCCccccccccCCcccEEEEEec------CCcEEEEEEccCC-CCcCHHHHHHHHHHHhccCCCccceEEEEE
Q 021046          144 ASVSAATENFSTQCKLGEGGFGPVYKGRLL------NGQEVAVKRLSNQ-SGQGLTEFKNEMMLIAKLQHRHLVRLFGCC  216 (318)
Q Consensus       144 ~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~l~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~  216 (318)
                      .++.....++.....+.+|.||.||+|.+.      +.+.|-+|.++.. +..+...++.|..++..+.|||+.+..+++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            344455667888888999999999999653      3456778877654 445677899999999999999999999999


Q ss_pred             Eec-CeeEEEEEeccCCChhhhhh-----cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC
Q 021046          217 IEQ-GENILIYEYMPNKSLDVFLF-----YPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM  290 (318)
Q Consensus       217 ~~~-~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~  290 (318)
                      .++ +..+.+|.++.-|+|..||.     .....+.+.-.+...++.|++.||+|||.++   +||.||.++|++||+..
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~L  433 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQL  433 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhhe
Confidence            876 45688999999999999997     3334556777888899999999999999987   99999999999999999


Q ss_pred             CceEeecccceeecC
Q 021046          291 NPKISDFGMARIFGG  305 (318)
Q Consensus       291 ~~ki~DfGla~~~~~  305 (318)
                      ++||+|=.|+|-+-+
T Consensus       434 qVkltDsaLSRDLFP  448 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFP  448 (563)
T ss_pred             eEEeccchhccccCc
Confidence            999999999986643


No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83  E-value=2.3e-20  Score=157.93  Aligned_cols=151  Identities=25%  Similarity=0.382  Sum_probs=127.0

Q ss_pred             HhcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ..-+|.++++||+|.||.++.|+ +-++++||||.-...+.  .-.+..|.+..+.|. .++|...+-+..++.+..||+
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            34589999999999999999996 56899999997765432  345677888887775 699999998888888999999


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-----CceEeecccce
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-----NPKISDFGMAR  301 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-----~~ki~DfGla~  301 (318)
                      |.+ |-||.++...  -.+.++.++...+|.|+..-++|+|++.   +|.|||||+|+||...+     .+.|.|||||+
T Consensus       104 dLL-GPSLEDLFD~--CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen  104 DLL-GPSLEDLFDL--CGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhh-CcCHHHHHHH--hcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            988 6688776632  3677999999999999999999999988   99999999999997654     38999999999


Q ss_pred             eecCCc
Q 021046          302 IFGGDE  307 (318)
Q Consensus       302 ~~~~~~  307 (318)
                      .+.+.+
T Consensus       178 ~YrDp~  183 (449)
T KOG1165|consen  178 EYRDPK  183 (449)
T ss_pred             hhcCcc
Confidence            986653


No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.83  E-value=1.4e-20  Score=155.24  Aligned_cols=148  Identities=22%  Similarity=0.439  Sum_probs=120.9

Q ss_pred             HhcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEE-EEEecCeeEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFG-CCIEQGENILI  225 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~-~~~~~~~~~lv  225 (318)
                      ..+.|.+.+.+|+|.||.+-+++++. ...+++|-+.+. .....+|.+|..----| .|.||+.-++ .|...+..+++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            34678888999999999999998754 567888887653 34567899998754444 4899998665 46777888999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE-cC-CCCceEeecccceee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-DS-DMNPKISDFGMARIF  303 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill-~~-~~~~ki~DfGla~~~  303 (318)
                      +||+|.|+|..-+    ....+.+.....++.|+++|+.|+|++.   +||||||.+|||| +. ...+||+|||+++..
T Consensus       101 qE~aP~gdL~snv----~~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  101 QEFAPRGDLRSNV----EAAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             eccCccchhhhhc----CcccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccccccc
Confidence            9999999997766    3456778888999999999999999988   9999999999998 33 347999999999765


Q ss_pred             c
Q 021046          304 G  304 (318)
Q Consensus       304 ~  304 (318)
                      +
T Consensus       174 g  174 (378)
T KOG1345|consen  174 G  174 (378)
T ss_pred             C
Confidence            4


No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.81  E-value=1.6e-19  Score=160.73  Aligned_cols=145  Identities=26%  Similarity=0.363  Sum_probs=120.8

Q ss_pred             CCccccccccCCcccEEEEEecCC--cEEEEEEccCCCCcCHHHHHHHHHHHhccCC----CccceEEEEE-EecCeeEE
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLLNG--QEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH----RHLVRLFGCC-IEQGENIL  224 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~~~--~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l  224 (318)
                      +|.+.++||+|+||.||.+.....  ..+|+|............+..|..++..+..    +++..+++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999999987553  4788887765433333367888888888863    6899999999 47778899


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC-----CCceEeeccc
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD-----MNPKISDFGM  299 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~-----~~~ki~DfGl  299 (318)
                      ||+.+ +.+|.++..... ...++..+...|+.|++.+|++||+.+   ++||||||.|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99987 778888664333 578999999999999999999999988   9999999999999865     4599999999


Q ss_pred             ce
Q 021046          300 AR  301 (318)
Q Consensus       300 a~  301 (318)
                      |+
T Consensus       174 ar  175 (322)
T KOG1164|consen  174 AR  175 (322)
T ss_pred             Cc
Confidence            98


No 412
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80  E-value=1.1e-19  Score=165.72  Aligned_cols=146  Identities=25%  Similarity=0.328  Sum_probs=121.0

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc-CCCccceEEEEEEecCeeEEEEE
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL-QHRHLVRLFGCCIEQGENILIYE  227 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  227 (318)
                      ++.|.....+|.|+|+.|-.+.. .+++..+||++.+...    +-.+|+.++... +|||++++.+.+.++.+.|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            56777888899999999998865 5678899999976522    234566555444 79999999999999999999999


Q ss_pred             eccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEE-cCCCCceEeecccceeecCC
Q 021046          228 YMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILL-DSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       228 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill-~~~~~~ki~DfGla~~~~~~  306 (318)
                      ++.+|-+.+.+...   .... ..+..|+.+|+.|+.|||+++   +|||||||+|||+ ++.++++|+|||.++.+.++
T Consensus       397 ~l~g~ell~ri~~~---~~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  397 LLDGGELLRRIRSK---PEFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             hccccHHHHHHHhc---chhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            99999876666432   2222 677789999999999999988   9999999999999 69999999999999988765


No 413
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.79  E-value=4.1e-19  Score=156.99  Aligned_cols=135  Identities=27%  Similarity=0.357  Sum_probs=111.3

Q ss_pred             hcCCccccccccCCcccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-----C---CccceEEEEEEec-
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-----H---RHLVRLFGCCIEQ-  219 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~~-  219 (318)
                      ..+|.+.++||.|.|++||++.. .+.+.||+|+.+.. ....+....|+.+|++++     |   ..||+|++.|... 
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            46888999999999999999976 45678999998753 344556789999999883     3   3599999999864 


Q ss_pred             ---CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC
Q 021046          220 ---GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD  289 (318)
Q Consensus       220 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~  289 (318)
                         .+.+||+|++ |-+|..++.+. ..+.++...+..|++||+.||.|||.++  +|||-||||+|||+..+
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence               4789999998 44666666433 4667899999999999999999999977  69999999999999654


No 414
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.79  E-value=1.8e-19  Score=156.79  Aligned_cols=149  Identities=25%  Similarity=0.473  Sum_probs=127.6

Q ss_pred             HHHHhcCCccccccccCCcccEEEEEec----CCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-CCccceEEEEEEecC
Q 021046          146 VSAATENFSTQCKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQG  220 (318)
Q Consensus       146 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~  220 (318)
                      +....+.|...++||+|.|+.||++.+.    ..+.||+|.+...+  ......+|+++|..+. +.||+++.+++..++
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            3445678889999999999999999753    36789999987643  3357899999999995 899999999999999


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC-CCceEeeccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD-MNPKISDFGM  299 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~-~~~ki~DfGl  299 (318)
                      ...+|+||++.-...++.      ..++......++..+..||.++|.++   ||||||||.|+|.+.. +.-.|.||||
T Consensus       109 ~v~ivlp~~~H~~f~~l~------~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLY------RSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             eeEEEecccCccCHHHHH------hcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence            999999999999888877      24567888899999999999999998   9999999999999764 5689999999


Q ss_pred             ceeecC
Q 021046          300 ARIFGG  305 (318)
Q Consensus       300 a~~~~~  305 (318)
                      |-..+.
T Consensus       180 A~~~d~  185 (418)
T KOG1167|consen  180 AQRYDG  185 (418)
T ss_pred             HHHHHh
Confidence            975443


No 415
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.79  E-value=7.6e-19  Score=144.13  Aligned_cols=139  Identities=19%  Similarity=0.210  Sum_probs=99.8

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCc--CHHHH----------------------HHHHHHHhccCCCc--c
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ--GLTEF----------------------KNEMMLIAKLQHRH--L  209 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--~~~~~----------------------~~e~~~l~~l~h~n--i  209 (318)
                      .+.||+|+||.||+|...+++.||||.+......  ....+                      ..|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999888999999988753221  11111                      34555555554432  4


Q ss_pred             ceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEEcC
Q 021046          210 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQ-YSRLRIIHRDLKASNILLDS  288 (318)
Q Consensus       210 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlk~~Nill~~  288 (318)
                      .+.+++    ...++||||++++.+.......   .... .....++.+++.++.++|. .+   |+|+||||+||+++ 
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence            445443    3468999999996543221110   0011 5567899999999999998 66   99999999999999 


Q ss_pred             CCCceEeecccceeecCC
Q 021046          289 DMNPKISDFGMARIFGGD  306 (318)
Q Consensus       289 ~~~~ki~DfGla~~~~~~  306 (318)
                      ++.++|+|||.|......
T Consensus       150 ~~~~~liDfg~a~~~~~~  167 (187)
T cd05119         150 DGKVYIIDVPQAVEIDHP  167 (187)
T ss_pred             CCcEEEEECcccccccCc
Confidence            999999999999877653


No 416
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.79  E-value=3.5e-19  Score=153.23  Aligned_cols=154  Identities=23%  Similarity=0.242  Sum_probs=126.7

Q ss_pred             HhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccCC--Cc----cceEEEEEEecCe
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH--RH----LVRLFGCCIEQGE  221 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h--~n----iv~l~~~~~~~~~  221 (318)
                      .+++|.+...+|+|+||.|-++... .+..||||++++. ....+..+-|+.+|.++.+  |+    +|++.++|...++
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            3788999999999999999999763 4688999999864 3444567889999999942  33    7888899999999


Q ss_pred             eEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-------------
Q 021046          222 NILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------------  288 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-------------  288 (318)
                      .++|+|.+ |-|+.+++.. ....+++...+..|+.|++++++|||+..   ++|-||||+|||+.+             
T Consensus       166 iCivfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~  240 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKV  240 (415)
T ss_pred             eEEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcc
Confidence            99999988 4478888833 24567889999999999999999999987   999999999999832             


Q ss_pred             -------CCCceEeecccceeecCCcc
Q 021046          289 -------DMNPKISDFGMARIFGGDEL  308 (318)
Q Consensus       289 -------~~~~ki~DfGla~~~~~~~~  308 (318)
                             +..+||+|||-|..-..+.+
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~hs  267 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEHHS  267 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccCcc
Confidence                   23489999999997765553


No 417
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.78  E-value=2.3e-18  Score=135.64  Aligned_cols=136  Identities=22%  Similarity=0.228  Sum_probs=115.6

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCC--CccceEEEEEEecCeeEEEEEeccCCC
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH--RHLVRLFGCCIEQGENILIYEYMPNKS  233 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~  233 (318)
                      .+.||+|.++.||++...+ ..+++|.......  ...+..|+..+..++|  +++++++++...++..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            4679999999999999855 7899998865433  5678999999999977  589999998888888999999999887


Q ss_pred             hhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          234 LDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       234 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +..+          +......++.++++++++||.....+++|+|++|+||++++.+.+++.|||+++...
T Consensus        80 ~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          80 LDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             cccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            7543          456677889999999999998654569999999999999999999999999998643


No 418
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.76  E-value=4.8e-19  Score=149.18  Aligned_cols=147  Identities=30%  Similarity=0.405  Sum_probs=119.2

Q ss_pred             hcCCccccccccCCcccEEEEE-ecCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecC------
Q 021046          150 TENFSTQCKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQG------  220 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------  220 (318)
                      ..+|.....+|.|.- .|-.+- .-.+++||+|++...  .....++..+|..++..++|+|+++++.+++-+.      
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            356777778888877 555553 245789999987643  2344567889999999999999999999998653      


Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      +.|+|||||. ++|...+.     -.++-.+..+|..|++.|+.|||+.+   |+||||||+||++..+..+||.|||+|
T Consensus        95 e~y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   95 EVYLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             hHHHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence            5699999995 47777764     23566788899999999999999988   999999999999999999999999999


Q ss_pred             eeecCC
Q 021046          301 RIFGGD  306 (318)
Q Consensus       301 ~~~~~~  306 (318)
                      +.-+.+
T Consensus       166 r~e~~~  171 (369)
T KOG0665|consen  166 RTEDTD  171 (369)
T ss_pred             cccCcc
Confidence            865444


No 419
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.75  E-value=1.7e-17  Score=140.93  Aligned_cols=136  Identities=23%  Similarity=0.243  Sum_probs=105.8

Q ss_pred             cccc-cCCcccEEEEEecCCcEEEEEEccCCC-------------CcCHHHHHHHHHHHhccCCCcc--ceEEEEEEecC
Q 021046          157 CKLG-EGGFGPVYKGRLLNGQEVAVKRLSNQS-------------GQGLTEFKNEMMLIAKLQHRHL--VRLFGCCIEQG  220 (318)
Q Consensus       157 ~~lg-~G~fg~Vy~~~~~~~~~vavK~l~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~~  220 (318)
                      ..|| .|+.|+||..... +..++||++....             ......+.+|+.++..|+|+++  ++.+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 8999999999874 6788999875311             1223567889999999998885  67777755432


Q ss_pred             e----eEEEEEeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEe
Q 021046          221 E----NILIYEYMPN-KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       221 ~----~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                      .    .++||||+++ .+|.+++..    ..++..    .+.+++.+|.+||+.+   |+||||||.|||++.++.++|+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI  184 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI  184 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence            2    2599999997 688887732    234433    3578999999999988   9999999999999999999999


Q ss_pred             ecccceeec
Q 021046          296 DFGMARIFG  304 (318)
Q Consensus       296 DfGla~~~~  304 (318)
                      |||.+....
T Consensus       185 Dfg~~~~~~  193 (239)
T PRK01723        185 DFDRGELRT  193 (239)
T ss_pred             ECCCcccCC
Confidence            999998765


No 420
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.75  E-value=1.8e-18  Score=154.10  Aligned_cols=158  Identities=25%  Similarity=0.313  Sum_probs=130.6

Q ss_pred             HHHHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCCCCcCHHHHHHHHHHHhccC------CCccceEEEEEEe
Q 021046          146 VSAATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ------HRHLVRLFGCCIE  218 (318)
Q Consensus       146 ~~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~  218 (318)
                      .+....+|.+.-..|+|-|++|.+|... .|+.||||++.+.. ...+.=+.|+.+|.+|+      --|+++|+..|..
T Consensus       427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h  505 (752)
T KOG0670|consen  427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH  505 (752)
T ss_pred             hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence            3445668888889999999999999763 47899999998743 23344478999999995      3589999999999


Q ss_pred             cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeec
Q 021046          219 QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDF  297 (318)
Q Consensus       219 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~Df  297 (318)
                      .+++|||+|-+. -+|.+.|..-..+..|....+..++.|+.-||..|-..+   |+|.||||+||||++.. .+|||||
T Consensus       506 knHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDf  581 (752)
T KOG0670|consen  506 KNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDF  581 (752)
T ss_pred             cceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccC
Confidence            999999999874 467777755445667888899999999999999999877   99999999999998865 5899999


Q ss_pred             ccceeecCCcc
Q 021046          298 GMARIFGGDEL  308 (318)
Q Consensus       298 Gla~~~~~~~~  308 (318)
                      |-|...+.++.
T Consensus       582 GSA~~~~enei  592 (752)
T KOG0670|consen  582 GSASFASENEI  592 (752)
T ss_pred             ccccccccccc
Confidence            99988876654


No 421
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.73  E-value=8.4e-17  Score=142.10  Aligned_cols=150  Identities=35%  Similarity=0.534  Sum_probs=127.3

Q ss_pred             CccccccccCCcccEEEEEecCCcEEEEEEccCCCCc---CHHHHHHHHHHHhccCCC-ccceEEEEEEecCeeEEEEEe
Q 021046          153 FSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ---GLTEFKNEMMLIAKLQHR-HLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       153 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~  228 (318)
                      |...+.||.|+||.||++...  ..+++|.+......   ....+.+|+.++..+.|+ +++++.+.+......+++++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566788999999999999876  78899988765333   367899999999999988 799999999777778999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCC-CceEeecccceeecCCc
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARIFGGDE  307 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla~~~~~~~  307 (318)
                      +.++++..++........+.......+..|++.++.|+|..+   ++|||+||+||+++..+ .++++|||+++.+....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            999999966532211136888999999999999999999988   99999999999999998 79999999998766543


No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70  E-value=3.5e-17  Score=158.97  Aligned_cols=147  Identities=24%  Similarity=0.335  Sum_probs=117.8

Q ss_pred             HHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC---CCccceEEEEEEecCeeEE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ---HRHLVRLFGCCIEQGENIL  224 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l  224 (318)
                      ...+.|.+.+.||+|+||+||+|...+|+.||+|.-+.....   +|.--..++.+|+   -+-|..+..+..-.+.-+|
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence            445678888999999999999999888999999987654332   2333334444554   2445556666667788899


Q ss_pred             EEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-------CCCceEeec
Q 021046          225 IYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------DMNPKISDF  297 (318)
Q Consensus       225 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-------~~~~ki~Df  297 (318)
                      |+||.+-|+|.+++.   ..+..+|.....++.|++.-++.||..+   |||+||||+|+||..       ...++|+||
T Consensus       772 v~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             eeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEec
Confidence            999999999999883   6678999999999999999999999987   999999999999942       345899999


Q ss_pred             ccceee
Q 021046          298 GMARIF  303 (318)
Q Consensus       298 Gla~~~  303 (318)
                      |-|--+
T Consensus       846 G~siDm  851 (974)
T KOG1166|consen  846 GRSIDM  851 (974)
T ss_pred             ccceee
Confidence            988544


No 423
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.69  E-value=1.1e-16  Score=147.20  Aligned_cols=142  Identities=22%  Similarity=0.247  Sum_probs=99.8

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCcCH----------------------------------------HHHHH
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGL----------------------------------------TEFKN  196 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~----------------------------------------~~~~~  196 (318)
                      +.||.|++|+||+|++.+|+.||||+.+.......                                        -+|..
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            68999999999999999999999998865321100                                        02444


Q ss_pred             HHHHHhccC-----CCccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH-HHHHHHhcC
Q 021046          197 EMMLIAKLQ-----HRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ-GLLYLHQYS  270 (318)
Q Consensus       197 e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~yLH~~~  270 (318)
                      |+..+.++.     ++++.-..-+....+..+|||||++|++|.++......  ..   .+..++.+++. .+..+|..+
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence            555555442     33332111122234567999999999999887643211  11   23456666665 467888876


Q ss_pred             CCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          271 RLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       271 ~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                         ++|+|++|.||+++.++++++.|||++..+.++
T Consensus       278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~  310 (437)
T TIGR01982       278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSEE  310 (437)
T ss_pred             ---ceeCCCCcccEEECCCCcEEEEeCCCeeECCHH
Confidence               999999999999999999999999999988653


No 424
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.58  E-value=1.7e-14  Score=116.24  Aligned_cols=132  Identities=23%  Similarity=0.170  Sum_probs=98.7

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccc-eEEEEEEecCeeEEEEEeccCCCh
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV-RLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      .+.++.|.++.||+++.. +..+++|....... ....+..|+..+..+.+.+++ +++.+.  .+..++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence            357899999999999875 67899998765432 223567899999988765544 455443  3446899999999887


Q ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          235 DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS--RLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       235 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~--~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      ....           .....++.+++++|..||...  ...++|+|++|.||+++ ++.+++.|||.|..-
T Consensus        79 ~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~  137 (170)
T cd05151          79 LTED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             cccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence            5421           011245678999999999876  23469999999999998 678999999998753


No 425
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.55  E-value=5.2e-15  Score=138.02  Aligned_cols=145  Identities=18%  Similarity=0.228  Sum_probs=94.3

Q ss_pred             cCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCc--------------------------C--------H----
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQ--------------------------G--------L----  191 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~--------------------------~--------~----  191 (318)
                      .+|+. +.||.|++|+||+|++++ |+.||||+.++....                          .        .    
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            35665 789999999999999987 999999998753110                          0        0    


Q ss_pred             --HHHHHHHHHHhccC----CCccceEEEEEEe-cCeeEEEEEeccCCChhhhhhcCCCC---CCCCHHHHHHHHHHHHH
Q 021046          192 --TEFKNEMMLIAKLQ----HRHLVRLFGCCIE-QGENILIYEYMPNKSLDVFLFYPKKK---RLLGWQARVRIIEGIAQ  261 (318)
Q Consensus       192 --~~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~---~~l~~~~~~~i~~~i~~  261 (318)
                        -+|.+|+..+.+++    +.+.+.+-.++.+ .+..+|||||++|+.+.++......+   ..+.......++.|+. 
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-  277 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-  277 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence              12344444444442    3333333333322 45678999999999997753211111   1222222333333333 


Q ss_pred             HHHHHHhcCCCCeeecCCCCCCEEEcCCC----CceEeecccceeecCC
Q 021046          262 GLLYLHQYSRLRIIHRDLKASNILLDSDM----NPKISDFGMARIFGGD  306 (318)
Q Consensus       262 ~l~yLH~~~~~~ivH~Dlk~~Nill~~~~----~~ki~DfGla~~~~~~  306 (318)
                            ..+   ++|+|++|.||+++.++    ++++.|||++..++++
T Consensus       278 ------~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        278 ------RDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             ------hCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence                  344   99999999999999988    9999999999988654


No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49  E-value=1.2e-14  Score=138.08  Aligned_cols=145  Identities=23%  Similarity=0.315  Sum_probs=111.1

Q ss_pred             ccccccccCCcccEEEEEec-CCcEEEEEEcc----CC-CCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          154 STQCKLGEGGFGPVYKGRLL-NGQEVAVKRLS----NQ-SGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~----~~-~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ...+.+|.|++|.|+..... .....+.|...    .. ... ....+..|+.+-..++|||++..+....+.....-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            35578999999988777542 23334444332    11 111 1122566777888899999988887777776666669


Q ss_pred             EeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          227 EYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       227 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      ||+++ +|..++..   ...+...++..+++|+..|+.|+|+.+   |.|||+||+|++++.++.+||+|||.+..+.-
T Consensus       401 E~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRY  472 (601)
T ss_pred             hcccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeecc
Confidence            99999 99887732   235777888899999999999999998   99999999999999999999999999987753


No 427
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.47  E-value=2.8e-14  Score=141.73  Aligned_cols=94  Identities=19%  Similarity=0.256  Sum_probs=73.7

Q ss_pred             ccCC-CccceEEEEE-------EecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 021046          203 KLQH-RHLVRLFGCC-------IEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRI  274 (318)
Q Consensus       203 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~i  274 (318)
                      .++| +||.+++++|       ...+..++++||+ +++|.+++..  ....+++..++.++.||++||.|||+++   |
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---I  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQG---I  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            3456 6888888887       3334567888987 5699999853  2456899999999999999999999987   9


Q ss_pred             eecCCCCCCEEEcC-------------------CCCceEeeccccee
Q 021046          275 IHRDLKASNILLDS-------------------DMNPKISDFGMARI  302 (318)
Q Consensus       275 vH~Dlk~~Nill~~-------------------~~~~ki~DfGla~~  302 (318)
                      +||||||+||||+.                   ++.+||+|||+++.
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~  148 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRR  148 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccc
Confidence            99999999999965                   44566666666654


No 428
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.43  E-value=2.3e-12  Score=108.29  Aligned_cols=142  Identities=17%  Similarity=0.258  Sum_probs=110.8

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCC-cCHHHHHHHHHHHhccCC--CccceEEEEEEecC---eeEEEEEecc
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-QGLTEFKNEMMLIAKLQH--RHLVRLFGCCIEQG---ENILIYEYMP  230 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~~~  230 (318)
                      +.|+.|.++.||+++..+|..+++|....... .....+..|+.++..+.+  .++.+++.+.....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            57899999999999887778899998765332 235678999999999976  45677887766542   5689999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYS----------------------------------------  270 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~----------------------------------------  270 (318)
                      +.++...+.    ...++......++.+++++|.+||+..                                        
T Consensus        84 G~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLL----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCC----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            998876542    134677777788888888888888521                                        


Q ss_pred             -------------CCCeeecCCCCCCEEEcC--CCCceEeeccccee
Q 021046          271 -------------RLRIIHRDLKASNILLDS--DMNPKISDFGMARI  302 (318)
Q Consensus       271 -------------~~~ivH~Dlk~~Nill~~--~~~~ki~DfGla~~  302 (318)
                                   ...++|+|+.|.||+++.  ++.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         245799999999999998  56789999998875


No 429
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.42  E-value=5.2e-12  Score=103.06  Aligned_cols=139  Identities=14%  Similarity=0.100  Sum_probs=100.1

Q ss_pred             cccccCCcccEEEEEecC-------CcEEEEEEccCC-------------CC---------cCHHHHH----HHHHHHhc
Q 021046          157 CKLGEGGFGPVYKGRLLN-------GQEVAVKRLSNQ-------------SG---------QGLTEFK----NEMMLIAK  203 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~l~~~-------------~~---------~~~~~~~----~e~~~l~~  203 (318)
                      ..||.|.-+.||.|...+       +..+|||..+..             +.         .....+.    +|+..|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997543       478999976421             00         0122333    79999998


Q ss_pred             cCC--CccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCC
Q 021046          204 LQH--RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL-HQYSRLRIIHRDLK  280 (318)
Q Consensus       204 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~Dlk  280 (318)
                      +..  -++++++++    ...++||||+.++.+.....   ....++......+..+++.+|..| |..+   +||+||+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs  152 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLS  152 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence            853  567777764    56789999998754422111   112344456667889999999999 7666   9999999


Q ss_pred             CCCEEEcCCCCceEeecccceeecCC
Q 021046          281 ASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       281 ~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +.||+++ ++.+.|+|||-|......
T Consensus       153 ~~NIL~~-~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         153 EYNMLWH-DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             HHHEEEE-CCcEEEEECCCceeCCCC
Confidence            9999996 578999999999877543


No 430
>PF08276 PAN_2:  PAN-like domain;  InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs
Probab=99.39  E-value=2e-13  Score=91.36  Aligned_cols=40  Identities=60%  Similarity=1.419  Sum_probs=35.2

Q ss_pred             CChhHHHHHhhccCCccceecccccCCCCceEEeccccccc
Q 021046            1 MNLNQCQAKCLKNCSCRAYANSKLTGGGSGCLMWFGDLIDL   41 (318)
Q Consensus         1 ~~~~~C~~~Cl~~C~C~a~~~~~~~~~~~~C~~w~~~l~~~   41 (318)
                      +++++|++.||+||||+||+|.+.. ++.+|++|+++|+|+
T Consensus        27 ~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen   27 VSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             CCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            4689999999999999999997654 668999999999875


No 431
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.38  E-value=4.1e-12  Score=100.50  Aligned_cols=136  Identities=21%  Similarity=0.283  Sum_probs=103.3

Q ss_pred             cccccCCcccEEEEEecCCcEEEEE-EccCCCC-c------CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVK-RLSNQSG-Q------GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK-~l~~~~~-~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..+++|+-+.+|.+.+.+ .++.+| ++++.-. .      ...+-.+|+.++.+++--.|....=+..+.+...++|||
T Consensus         2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            357899999999997744 345555 3433211 1      123467899999999877777666677888888999999


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCc
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDE  307 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~  307 (318)
                      +++..|.+.+...          ...++..+-.-+.-||..+   |+|+||.++||++..+. +.++||||+.+-...+
T Consensus        81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~E  145 (204)
T COG3642          81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVE  145 (204)
T ss_pred             eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccccccHH
Confidence            9999998888322          2456777888889999988   99999999999996655 9999999999655443


No 432
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.36  E-value=1.2e-13  Score=126.50  Aligned_cols=145  Identities=26%  Similarity=0.340  Sum_probs=117.5

Q ss_pred             ccccCCcccEEEEE----ecCCcEEEEEEccCCCCc--CHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEEEecc
Q 021046          158 KLGEGGFGPVYKGR----LLNGQEVAVKRLSNQSGQ--GLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~----~~~~~~vavK~l~~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      .+|+|.||.|++..    ...+..+|.|.+++....  .......|..++...+ ||.++++.-.+..+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            37899999999874    234667888877654221  1124566778888887 9999999999999999999999999


Q ss_pred             CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCCcc
Q 021046          231 NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGDEL  308 (318)
Q Consensus       231 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~~~  308 (318)
                      +|+|...+   .....+.+.....+...++-+++++|+.+   |+|||+|++||+++.+|++++.|||+++..-..+.
T Consensus        81 gg~lft~l---~~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~  152 (612)
T KOG0603|consen   81 GGDLFTRL---SKEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI  152 (612)
T ss_pred             cchhhhcc---ccCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence            99987665   34556667777777778999999999887   99999999999999999999999999998765543


No 433
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.34  E-value=1.6e-13  Score=132.45  Aligned_cols=142  Identities=21%  Similarity=0.239  Sum_probs=116.1

Q ss_pred             CCccccccccCCcccEEEEEecCCcEEEEEEccCCC-CcCHHHHHHHHHH--HhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          152 NFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS-GQGLTEFKNEMML--IAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       152 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ++...+.||.+.|=+|.+|++++|. |+||++-+.. ....+.|.++++-  ...++|||.+.+.-+-..+...|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5777889999999999999998887 8899887654 4455666555443  4556899999998877777777888888


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      +.+ +|.+.+   ..+..+...+...|+.|++.||.-+|..+   |.|||||.+||||++..-+.|+||.--|
T Consensus       103 vkh-nLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen  103 VKH-NLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             Hhh-hhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccC
Confidence            865 566666   34556777888899999999999999988   9999999999999999999999998654


No 434
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.31  E-value=2.9e-11  Score=95.43  Aligned_cols=150  Identities=24%  Similarity=0.288  Sum_probs=109.0

Q ss_pred             cccccccCCcccEEEEEecCCcEEEEE-EccCCCC-------cCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEE
Q 021046          155 TQCKLGEGGFGPVYKGRLLNGQEVAVK-RLSNQSG-------QGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       155 ~~~~lg~G~fg~Vy~~~~~~~~~vavK-~l~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  226 (318)
                      ....+-||+-+.|+++.+. |+...|| ++.+.-.       -...+.++|++.+.+++--.|.-..-++.+.....++|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            3467889999999999884 5665666 4443211       12346788999999987666666666677778889999


Q ss_pred             EeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC---ceEeeccccee
Q 021046          227 EYMPN-KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN---PKISDFGMARI  302 (318)
Q Consensus       227 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~---~ki~DfGla~~  302 (318)
                      ||+++ -++.+++...-.....+ .....++.+|-+.+.-||..+   |+|+||..+||++.+++.   +.++|||++..
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            99987 46777765432222222 223578889999999999988   999999999999976554   58999999976


Q ss_pred             ecCCccc
Q 021046          303 FGGDELQ  309 (318)
Q Consensus       303 ~~~~~~~  309 (318)
                      -..++.+
T Consensus       166 s~~~EDK  172 (229)
T KOG3087|consen  166 SRLPEDK  172 (229)
T ss_pred             ccCcccc
Confidence            5544433


No 435
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.30  E-value=5.8e-12  Score=108.31  Aligned_cols=151  Identities=23%  Similarity=0.319  Sum_probs=98.1

Q ss_pred             cCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCC----------CccceEEEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQH----------RHLVRLFGCC  216 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~  216 (318)
                      ..+...+.||.|+|+.||.+++. +++++|+|.+.-.   .....+.+++|......+.+          -.++-.++..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            35566789999999999999885 4899999977532   23345677777765555322          2233223322


Q ss_pred             Eec--------C---------eeEEEEEeccCCChhhhhh---cCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 021046          217 IEQ--------G---------ENILIYEYMPNKSLDVFLF---YPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRLRII  275 (318)
Q Consensus       217 ~~~--------~---------~~~lv~e~~~~g~L~~~l~---~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv  275 (318)
                      ...        .         +.+++|+-+ .+||..++.   ... ....+....++.+..|+.+.+++||+.+   ++
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lV  167 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LV  167 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eE
Confidence            211        1         225566665 567776643   111 1234555667788899999999999998   99


Q ss_pred             ecCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          276 HRDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       276 H~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      |+||+|+|++++.+|.++|+||+-....+.
T Consensus       168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~  197 (288)
T PF14531_consen  168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGT  197 (288)
T ss_dssp             EST-SGGGEEE-TTS-EEE--GGGEEETTE
T ss_pred             ecccceeeEEEcCCCCEEEcChHHHeecCc
Confidence            999999999999999999999998776543


No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.30  E-value=1.7e-12  Score=113.08  Aligned_cols=89  Identities=28%  Similarity=0.484  Sum_probs=68.4

Q ss_pred             CCCccceEEEEEEec---------------------------CeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHH
Q 021046          205 QHRHLVRLFGCCIEQ---------------------------GENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIE  257 (318)
Q Consensus       205 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~  257 (318)
                      +|||||++.++|.+.                           ..+|+||.-.+ -+|..++.    ....+.....-|..
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~----~~~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW----TRHRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh----cCCCchHHHHHHHH
Confidence            599999999988542                           23467776543 36777773    34455667777899


Q ss_pred             HHHHHHHHHHhcCCCCeeecCCCCCCEEE--cCCC--CceEeecccce
Q 021046          258 GIAQGLLYLHQYSRLRIIHRDLKASNILL--DSDM--NPKISDFGMAR  301 (318)
Q Consensus       258 ~i~~~l~yLH~~~~~~ivH~Dlk~~Nill--~~~~--~~ki~DfGla~  301 (318)
                      |+++|+.|||.++   +.|||+|++|||+  |++.  .+.|+|||.+-
T Consensus       349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceee
Confidence            9999999999988   9999999999998  4444  36899999663


No 437
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.25  E-value=1.9e-12  Score=107.54  Aligned_cols=138  Identities=24%  Similarity=0.435  Sum_probs=112.6

Q ss_pred             ccccccccCCcccEEEEEecCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccC
Q 021046          154 STQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      ...-+|.+...|..|+|++..+ .+++|++.-.  .....++|..|.-.|+...||||+.++|.|....+..++..||+.
T Consensus       193 nl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~  271 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF  271 (448)
T ss_pred             hhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence            3445788999999999999654 4555766532  233346789999999999999999999999999999999999999


Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeee-cCCCCCCEEEcCCCCceEe
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH-RDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH-~Dlk~~Nill~~~~~~ki~  295 (318)
                      |+|...|+.. .....+-.++.+++.+||+||+|||+..  +++- --|.+..+++|++.+++|+
T Consensus       272 gslynvlhe~-t~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltaris  333 (448)
T KOG0195|consen  272 GSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARIS  333 (448)
T ss_pred             hHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhhee
Confidence            9999998654 3445677888999999999999999976  3443 4578899999999998875


No 438
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.24  E-value=1.2e-11  Score=113.03  Aligned_cols=100  Identities=32%  Similarity=0.489  Sum_probs=90.4

Q ss_pred             HhccCCCccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 021046          201 IAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLK  280 (318)
Q Consensus       201 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk  280 (318)
                      |+.+.|.|+.+++|.+.++...+.|.+|++.|+|.+.+..  ....++|.....+.++++.||.|||...  -..|+.++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~   76 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK   76 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence            3568999999999999999999999999999999999854  4567899999999999999999999753  23999999


Q ss_pred             CCCEEEcCCCCceEeecccceeec
Q 021046          281 ASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       281 ~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ++|+++|..+.+||+|||+..+..
T Consensus        77 s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             cccceeeeeEEEEechhhhccccc
Confidence            999999999999999999998874


No 439
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins,  plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins. Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=99.19  E-value=2e-11  Score=84.37  Aligned_cols=51  Identities=25%  Similarity=0.491  Sum_probs=41.5

Q ss_pred             CChhHHHHHhhc---cCCccceecccccCCCCceEEecccc-ccccCcccCCCCceEEEe
Q 021046            1 MNLNQCQAKCLK---NCSCRAYANSKLTGGGSGCLMWFGDL-IDLRKPISNFTGQSVYIR   56 (318)
Q Consensus         1 ~~~~~C~~~Cl~---~C~C~a~~~~~~~~~~~~C~~w~~~l-~~~~~~~~~~~~~~~~~~   56 (318)
                      .+.+||++.|++   ||||+||+|.+   .+.+|.+|++++ +|++...  ..|.++|+|
T Consensus        25 ~s~~eC~~~Cl~~~~nCsC~Aya~~~---~~~gC~~W~~~l~~d~~~~~--~~g~~Ly~r   79 (80)
T cd00129          25 NTADECANRCEKNGLPFSCKAFVFAK---ARKQCLWFPFNSMSGVRKEF--SHGFDLYEN   79 (80)
T ss_pred             cCHHHHHHHHhcCCCCCCceeeeccC---CCCCeEEecCcchhhHHhcc--CCCceeEeE
Confidence            368999999999   99999999964   235899999999 8887642  237788886


No 440
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.18  E-value=2.2e-10  Score=93.16  Aligned_cols=127  Identities=25%  Similarity=0.315  Sum_probs=82.8

Q ss_pred             cEEEEEecCCcEEEEEEccCCC-------------C--------cC-----HHHHHHHHHHHhccCCC--ccceEEEEEE
Q 021046          166 PVYKGRLLNGQEVAVKRLSNQS-------------G--------QG-----LTEFKNEMMLIAKLQHR--HLVRLFGCCI  217 (318)
Q Consensus       166 ~Vy~~~~~~~~~vavK~l~~~~-------------~--------~~-----~~~~~~e~~~l~~l~h~--niv~l~~~~~  217 (318)
                      .||.|...+|..+|||..+...             .        ..     .....+|...|.++..-  ++++++++  
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--   78 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY--   78 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence            3899999899999999765310             0        01     12356899999999765  56677654  


Q ss_pred             ecCeeEEEEEecc--CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCEEEcCCCCceE
Q 021046          218 EQGENILIYEYMP--NKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYL-HQYSRLRIIHRDLKASNILLDSDMNPKI  294 (318)
Q Consensus       218 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yL-H~~~~~~ivH~Dlk~~Nill~~~~~~ki  294 (318)
                        +...+||||++  +..+..+....     ++......++.+++..+..+ |..+   |+|+||.+.||+++++ .+.|
T Consensus        79 --~~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   79 --NRNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             --ETTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred             --eCCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence              25589999999  55554433111     11234456777788866654 6665   9999999999999887 9999


Q ss_pred             eecccceeecC
Q 021046          295 SDFGMARIFGG  305 (318)
Q Consensus       295 ~DfGla~~~~~  305 (318)
                      +|||.|.....
T Consensus       148 IDf~qav~~~~  158 (188)
T PF01163_consen  148 IDFGQAVDSSH  158 (188)
T ss_dssp             --GTTEEETTS
T ss_pred             EecCcceecCC
Confidence            99999987654


No 441
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.13  E-value=2.2e-09  Score=92.45  Aligned_cols=140  Identities=17%  Similarity=0.094  Sum_probs=99.2

Q ss_pred             cccCCcccEEEEEecCCcEEEEEEccCCCC-----------cCHHHHHHHHHHHhccCCCc--cceEEEEEEe-----cC
Q 021046          159 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSG-----------QGLTEFKNEMMLIAKLQHRH--LVRLFGCCIE-----QG  220 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~-----------~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~-----~~  220 (318)
                      +-......|++.++ +|+.+.||+......           .....+.+|...+.++...+  .++++++...     ..
T Consensus        30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~  108 (268)
T PRK15123         30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR  108 (268)
T ss_pred             EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence            33333344667666 577899997753221           11124788999998885433  4455666543     23


Q ss_pred             eeEEEEEeccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC-------CCCc
Q 021046          221 ENILIYEYMPNK-SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS-------DMNP  292 (318)
Q Consensus       221 ~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~-------~~~~  292 (318)
                      ..++|||++++. +|.+++..-. ....+......++.+++..+.-||..+   |+|+|+++.|||++.       +..+
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~  184 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKL  184 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceE
Confidence            468999999986 7888873211 233455677789999999999999998   999999999999975       4679


Q ss_pred             eEeecccceee
Q 021046          293 KISDFGMARIF  303 (318)
Q Consensus       293 ki~DfGla~~~  303 (318)
                      .++||+.++..
T Consensus       185 ~LIDl~r~~~~  195 (268)
T PRK15123        185 SVIDLHRAQIR  195 (268)
T ss_pred             EEEECCccccc
Confidence            99999999653


No 442
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07  E-value=2e-11  Score=116.27  Aligned_cols=155  Identities=23%  Similarity=0.311  Sum_probs=119.2

Q ss_pred             cCCccccccccCCcccEEEEEecC--CcEEEEEEccCCC--CcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEE
Q 021046          151 ENFSTQCKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQS--GQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       151 ~~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~l~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv  225 (318)
                      ..|...+.||+|+|+.|-......  ...+|+|.+....  .........|..+-..+. |+|++.+++.....+..++.
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            456667789999999999886533  3456666665432  222334445666666666 99999999999999999999


Q ss_pred             EEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCEEEcCCC-CceEeecccceee
Q 021046          226 YEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLH-QYSRLRIIHRDLKASNILLDSDM-NPKISDFGMARIF  303 (318)
Q Consensus       226 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivH~Dlk~~Nill~~~~-~~ki~DfGla~~~  303 (318)
                      .||..++++...+. .......+......++.|+..++.|+| ..+   +.|+|+||+|.+++..+ ..+++|||+|..+
T Consensus       100 ~~~s~g~~~f~~i~-~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  100 LSYSDGGSLFSKIS-HPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cCcccccccccccc-cCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence            99999999877663 112224455667788999999999999 766   99999999999999999 9999999999887


Q ss_pred             cC-Cccc
Q 021046          304 GG-DELQ  309 (318)
Q Consensus       304 ~~-~~~~  309 (318)
                      .. ++..
T Consensus       176 ~~~~g~~  182 (601)
T KOG0590|consen  176 RNKNGAE  182 (601)
T ss_pred             cccCCcc
Confidence            66 4433


No 443
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.
Probab=99.05  E-value=2.8e-10  Score=80.44  Aligned_cols=52  Identities=44%  Similarity=0.986  Sum_probs=41.9

Q ss_pred             ChhHHHHHhhccCCccceecccccCCCCceEEeccccccccCcccCCCCceEEEeec
Q 021046            2 NLNQCQAKCLKNCSCRAYANSKLTGGGSGCLMWFGDLIDLRKPISNFTGQSVYIRVP   58 (318)
Q Consensus         2 ~~~~C~~~Cl~~C~C~a~~~~~~~~~~~~C~~w~~~l~~~~~~~~~~~~~~~~~~~~   58 (318)
                      +.++|++.|++||+|+||+|.+   ++.+|.+|.+++.+.+.+.  ..+...|++++
T Consensus        33 s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~--~~~~~~yiKv~   84 (84)
T cd01098          33 SLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLS--SGGGTLYLRLA   84 (84)
T ss_pred             CHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeec--CCCcEEEEEeC
Confidence            6789999999999999999874   4568999999998876642  22567888864


No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.03  E-value=2.3e-09  Score=96.99  Aligned_cols=140  Identities=20%  Similarity=0.293  Sum_probs=112.4

Q ss_pred             ccEEEEEe-cCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEe----cCeeEEEEEeccC-CChhhhh
Q 021046          165 GPVYKGRL-LNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIE----QGENILIYEYMPN-KSLDVFL  238 (318)
Q Consensus       165 g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-g~L~~~l  238 (318)
                      .+.|++.. .+|..+++|++.....+.......-++.++++.|+|+|++..++..    +..+++||+|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            46788864 5789999999954433333334556788999999999999999873    3567999999986 5665544


Q ss_pred             hcC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          239 FYP------------KKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       239 ~~~------------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +..            ..+...++...|.++.|+..||.++|+.|   +.-+-|.|++|+++.+.+++|+..|+..++..|
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            321            22345778999999999999999999998   888999999999999999999999999998877


Q ss_pred             c
Q 021046          307 E  307 (318)
Q Consensus       307 ~  307 (318)
                      .
T Consensus       447 ~  447 (655)
T KOG3741|consen  447 P  447 (655)
T ss_pred             C
Confidence            5


No 445
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.94  E-value=3.8e-09  Score=98.29  Aligned_cols=123  Identities=16%  Similarity=0.214  Sum_probs=98.8

Q ss_pred             ecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHH
Q 021046          172 LLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQA  251 (318)
Q Consensus       172 ~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~  251 (318)
                      ..++.+|.|...+.......+...+-+..|+.++||||++++..+...+..|+|+|-+..  |..++..      +....
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~------l~~~~  105 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE------LGKEE  105 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH------hHHHH
Confidence            346788999888776553445567888899999999999999999999999999998743  4444421      22344


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          252 RVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       252 ~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      ...-+.||+.||.|||+.+  .++|++|..+.|+|+..|..||++|-++....
T Consensus       106 v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen  106 VCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence            5556789999999999766  59999999999999999999999999885443


No 446
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.90  E-value=1.3e-08  Score=85.56  Aligned_cols=150  Identities=19%  Similarity=0.186  Sum_probs=100.2

Q ss_pred             ccHHHHHHHhcCCccccccccCCcccEEEEEecCCcEEEEEEccCC--------------------CCc--CHHHHHHHH
Q 021046          141 FSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ--------------------SGQ--GLTEFKNEM  198 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~--------------------~~~--~~~~~~~e~  198 (318)
                      ..+..+.....=..++.+||-|.-+.||.|..++|.++|||.=+..                    +..  ......+|.
T Consensus        81 LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf  160 (304)
T COG0478          81 LALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREF  160 (304)
T ss_pred             HHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHH
Confidence            3344433333334566899999999999999999999999943211                    000  122457888


Q ss_pred             HHHhccCCC--ccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 021046          199 MLIAKLQHR--HLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIH  276 (318)
Q Consensus       199 ~~l~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH  276 (318)
                      ..|.+|.-.  .+++.+++    +...+||||+++-.|...-.        +....-.++..|++-+.-+-..|   +||
T Consensus       161 ~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~~G---iVH  225 (304)
T COG0478         161 EALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYRRG---IVH  225 (304)
T ss_pred             HHHHHhhhcCCCCCCcccc----ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHHcC---ccc
Confidence            899888655  67766654    56789999999876643220        11122223333444333333444   999


Q ss_pred             cCCCCCCEEEcCCCCceEeecccceeecC
Q 021046          277 RDLKASNILLDSDMNPKISDFGMARIFGG  305 (318)
Q Consensus       277 ~Dlk~~Nill~~~~~~ki~DfGla~~~~~  305 (318)
                      +|+.+-||+++++|.+.++||-=+...+.
T Consensus       226 GDlSefNIlV~~dg~~~vIDwPQ~v~~~h  254 (304)
T COG0478         226 GDLSEFNILVTEDGDIVVIDWPQAVPISH  254 (304)
T ss_pred             cCCchheEEEecCCCEEEEeCcccccCCC
Confidence            99999999999999999999987765543


No 447
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.89  E-value=9.1e-09  Score=95.88  Aligned_cols=143  Identities=16%  Similarity=0.169  Sum_probs=92.6

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCc--------------------------CH----H----------HHHH
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ--------------------------GL----T----------EFKN  196 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------------------------~~----~----------~~~~  196 (318)
                      +.|+.++-|+||+|++++|+.||||+.++.-..                          ..    +          ++..
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            589999999999999999999999988653111                          00    1          1223


Q ss_pred             HHHHHhcc-----CCCccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 021046          197 EMMLIAKL-----QHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSR  271 (318)
Q Consensus       197 e~~~l~~l-----~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~  271 (318)
                      |...+.++     +.|++.-..=++.-.+...|+|||++|-.+.+......  ..++.+.......++.--.-+-  .+ 
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~ia~~~~~~f~~q~~~--dg-  285 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRKELAELLVRAFLRQLLR--DG-  285 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHHHHHHHHHHHHHHHHHh--cC-
Confidence            33333333     13333222223334567899999999999988754333  3344332222222222112222  24 


Q ss_pred             CCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          272 LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       272 ~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                        +.|.|..|-||+++.++.+-+.|||+...+++.
T Consensus       286 --ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         286 --FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             --ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence              999999999999999999999999999877654


No 448
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.89  E-value=2.1e-08  Score=83.44  Aligned_cols=109  Identities=24%  Similarity=0.225  Sum_probs=85.9

Q ss_pred             CHHHHHHHHHHHhccCC--CccceEEEEEEecC----eeEEEEEeccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 021046          190 GLTEFKNEMMLIAKLQH--RHLVRLFGCCIEQG----ENILIYEYMPNK-SLDVFLFYPKKKRLLGWQARVRIIEGIAQG  262 (318)
Q Consensus       190 ~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~  262 (318)
                      ......+|...+..+..  -..++.+++.....    ..++|+|++++. +|.+++...   ...+......++.+++..
T Consensus        54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l~~~  130 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRALARL  130 (206)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHHHHH
Confidence            34567888888888853  44566777766532    348999999984 788887431   125556778899999999


Q ss_pred             HHHHHhcCCCCeeecCCCCCCEEEcCCC---CceEeecccceeec
Q 021046          263 LLYLHQYSRLRIIHRDLKASNILLDSDM---NPKISDFGMARIFG  304 (318)
Q Consensus       263 l~yLH~~~~~~ivH~Dlk~~Nill~~~~---~~ki~DfGla~~~~  304 (318)
                      +.-||..+   |+|+|++|.|||++.+.   .+.++||+-++...
T Consensus       131 i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  131 IAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            99999998   99999999999999887   89999999988765


No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.85  E-value=1.5e-09  Score=99.67  Aligned_cols=149  Identities=24%  Similarity=0.280  Sum_probs=119.2

Q ss_pred             HHhcCCccccccccCCcccEEEEEe--cCCcEEEEEEccCCCCcCHHH--HHHHHHHHhcc-CCCccceEEEEEEecCee
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRL--LNGQEVAVKRLSNQSGQGLTE--FKNEMMLIAKL-QHRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~--~~~e~~~l~~l-~h~niv~l~~~~~~~~~~  222 (318)
                      ....+|..+..||.|.|+.|+....  .++..+++|.+.+.......+  -..|+.+...+ .|.+.++....|...+..
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            4456888899999999999998853  457789999877653333222  23455555555 489999988888888888


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC-CCceEeecccce
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD-MNPKISDFGMAR  301 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~-~~~ki~DfGla~  301 (318)
                      ++--||++++++...+   .....++...++++..|++.++.++|+..   ++|+|+||+||++..+ +..++.|||.+.
T Consensus       342 ~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             cCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccccccc
Confidence            9999999999987766   23455777888899999999999999877   9999999999999886 888999999986


Q ss_pred             e
Q 021046          302 I  302 (318)
Q Consensus       302 ~  302 (318)
                      .
T Consensus       416 ~  416 (524)
T KOG0601|consen  416 R  416 (524)
T ss_pred             c
Confidence            3


No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.79  E-value=4.5e-09  Score=102.07  Aligned_cols=111  Identities=29%  Similarity=0.450  Sum_probs=75.9

Q ss_pred             hcCCccccccccCCcccEEEEEecC-CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  228 (318)
                      ..+|..++.|-.|+||.||..+++. .+.+|.| +++..     .+.+-  ++.....|.+|                  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~-----lilRn--ilt~a~npfvv------------------  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN-----LILRN--ILTFAGNPFVV------------------  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhc-ccccc-----hhhhc--cccccCCccee------------------
Confidence            4689999999999999999998754 5678873 33321     11110  22223344443                  


Q ss_pred             ccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          229 MPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       229 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                         |+=...+   +....++.        +++.+++|||+.+   |+|||+||+|.+|+.-|++|++|||+++.-
T Consensus       136 ---gDc~tll---k~~g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 ---GDCATLL---KNIGPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             ---chhhhhc---ccCCCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhh
Confidence               3333333   12222322        2377999999887   999999999999999999999999998753


No 451
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.77  E-value=6.3e-09  Score=95.67  Aligned_cols=152  Identities=24%  Similarity=0.288  Sum_probs=118.7

Q ss_pred             cCCcccccccc--CCcccEEEEEe---cCCcEEEEEEccCC--CCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCee
Q 021046          151 ENFSTQCKLGE--GGFGPVYKGRL---LNGQEVAVKRLSNQ--SGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGEN  222 (318)
Q Consensus       151 ~~~~~~~~lg~--G~fg~Vy~~~~---~~~~~vavK~l~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~  222 (318)
                      ..|.....+|.  |.+|.||.+..   .++..+|+|+-+..  .+.....=.+|+....+++ |+|.++.+..+...+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            34566678999  99999999976   45778999874432  2222233356666666664 99999999999999999


Q ss_pred             EEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCEEEcCC-CCceEeec
Q 021046          223 ILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQ----GLLYLHQYSRLRIIHRDLKASNILLDSD-MNPKISDF  297 (318)
Q Consensus       223 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~yLH~~~~~~ivH~Dlk~~Nill~~~-~~~ki~Df  297 (318)
                      ++-+|++. .+|..+.+.  ....++....+.+..+...    ||..+|+..   ++|-|+||.||++..+ ...+++||
T Consensus       194 fiqtE~~~-~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eeeecccc-chhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence            99999986 677666632  3445666777777777777    999999987   9999999999999999 88999999


Q ss_pred             ccceeecCCcc
Q 021046          298 GMARIFGGDEL  308 (318)
Q Consensus       298 Gla~~~~~~~~  308 (318)
                      |+...++...+
T Consensus       268 ~~v~~i~~~~~  278 (524)
T KOG0601|consen  268 GLVSKISDGNF  278 (524)
T ss_pred             ceeEEccCCcc
Confidence            99998887654


No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.74  E-value=5.5e-07  Score=73.99  Aligned_cols=139  Identities=16%  Similarity=0.154  Sum_probs=102.1

Q ss_pred             cccCCcccEEEEEecCCcEEEEEEccCC---C---CcCHHHHHHHHHHHhccCC--CccceEEEEEEecC----eeEEEE
Q 021046          159 LGEGGFGPVYKGRLLNGQEVAVKRLSNQ---S---GQGLTEFKNEMMLIAKLQH--RHLVRLFGCCIEQG----ENILIY  226 (318)
Q Consensus       159 lg~G~fg~Vy~~~~~~~~~vavK~l~~~---~---~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~  226 (318)
                      -|+||-+.|++-.+. |..+-+|+-.+.   +   +.+...|.+|+..+..+..  -.+++...+.....    .-+||+
T Consensus        26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            356888889998774 447889976521   1   4567789999999999864  33555552222221    357999


Q ss_pred             EeccC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC--ceEeeccccee
Q 021046          227 EYMPN-KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN--PKISDFGMARI  302 (318)
Q Consensus       227 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~--~ki~DfGla~~  302 (318)
                      |-+++ -+|.+++... .....+...+..++.+++..+.-||+.+   +.|+|+-+.||+++.++.  ++++||--++.
T Consensus       105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            97764 5787776321 1234566777899999999999999988   999999999999986667  99999987653


No 453
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.73  E-value=3.6e-07  Score=77.02  Aligned_cols=139  Identities=18%  Similarity=0.183  Sum_probs=86.0

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCc--cceEEEEEEecCeeEEEEEeccCCC-
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRH--LVRLFGCCIEQGENILIYEYMPNKS-  233 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~-  233 (318)
                      .+||+|..+.||+.   .+..+++|......  ......+|..++..+..-.  +.+.+++....+...+|||+++|.+ 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            47899999999984   24466778776422  3456788999999886443  4677888877778889999999963 


Q ss_pred             hhhhh---------------------hcCCCCCCCCHHHHH-HHHHH----------HHH-HHHHHHh-cCCCCeeecCC
Q 021046          234 LDVFL---------------------FYPKKKRLLGWQARV-RIIEG----------IAQ-GLLYLHQ-YSRLRIIHRDL  279 (318)
Q Consensus       234 L~~~l---------------------~~~~~~~~l~~~~~~-~i~~~----------i~~-~l~yLH~-~~~~~ivH~Dl  279 (318)
                      +...+                     +... ....+..... .+..+          +.. ...+|.. .....++|+|+
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTK-CDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCC-CCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence            21111                     1100 0011111100 01000          001 1222221 12345789999


Q ss_pred             CCCCEEEcCCCCceEeeccccee
Q 021046          280 KASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       280 k~~Nill~~~~~~ki~DfGla~~  302 (318)
                      .|.||++++++ +.|.||+.+..
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcCc
Confidence            99999999888 99999998863


No 454
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.68  E-value=4.1e-08  Score=79.30  Aligned_cols=62  Identities=26%  Similarity=0.144  Sum_probs=53.6

Q ss_pred             CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          232 KSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       232 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      |+|.+++..  ....+++..+..++.|++.||.|||+++         ||+|||++.++.+|+  ||+++.....
T Consensus         1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~   62 (176)
T smart00750        1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE   62 (176)
T ss_pred             CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc
Confidence            688888843  2456999999999999999999999865         999999999999999  9999987543


No 455
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.68  E-value=1.2e-08  Score=87.39  Aligned_cols=96  Identities=29%  Similarity=0.365  Sum_probs=80.9

Q ss_pred             HHHhccCCCccceEEEEEEecC-----eeEEEEEeccCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 021046          199 MLIAKLQHRHLVRLFGCCIEQG-----ENILIYEYMPNKSLDVFLFYPK-KKRLLGWQARVRIIEGIAQGLLYLHQYSRL  272 (318)
Q Consensus       199 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~  272 (318)
                      .-|-.+.|.|||+++.||.+..     +..+++|||+.|++..+|...+ ....+......+++.||..||.|||+. .+
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence            3455567999999999997643     4689999999999999997543 345677778889999999999999996 47


Q ss_pred             CeeecCCCCCCEEEcCCCCceEe
Q 021046          273 RIIHRDLKASNILLDSDMNPKIS  295 (318)
Q Consensus       273 ~ivH~Dlk~~Nill~~~~~~ki~  295 (318)
                      +|+|+++..+-|++..++-+||.
T Consensus       198 piihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             ccccCCcchhheeecCCceEEec
Confidence            89999999999999999988875


No 456
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.67  E-value=1.4e-07  Score=77.04  Aligned_cols=106  Identities=21%  Similarity=0.194  Sum_probs=84.2

Q ss_pred             HHHHHHHhccCC-CccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 021046          195 KNEMMLIAKLQH-RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLR  273 (318)
Q Consensus       195 ~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~  273 (318)
                      ..|..++..+++ +++++++|.|-    .++|.||.+.+++...-..-..-...+|..+.+||.++++.+.+|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            458888888876 69999999994    3789999998766421100012234689999999999999999999865556


Q ss_pred             eeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          274 IIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       274 ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      +.-.|++|+|+.+++++++|+.|...+....
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            8889999999999999999999999876553


No 457
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.67  E-value=5.1e-09  Score=94.81  Aligned_cols=81  Identities=28%  Similarity=0.379  Sum_probs=73.3

Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      ..++.|+++.-.+|.+++...+.....++...+.++.|++.|++|   ++   .+|+|+||.||+...+.++||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence            468999999999999999777667778889999999999999999   55   999999999999999999999999999


Q ss_pred             eeecCCc
Q 021046          301 RIFGGDE  307 (318)
Q Consensus       301 ~~~~~~~  307 (318)
                      .....++
T Consensus       404 ts~~~~~  410 (516)
T KOG1033|consen  404 TSQDKDE  410 (516)
T ss_pred             eecccCC
Confidence            8877665


No 458
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.62  E-value=4.5e-07  Score=74.80  Aligned_cols=139  Identities=15%  Similarity=0.178  Sum_probs=90.8

Q ss_pred             HhcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHH---------HHHHHHHhccCCCc---cceEEEEE
Q 021046          149 ATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEF---------KNEMMLIAKLQHRH---LVRLFGCC  216 (318)
Q Consensus       149 ~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~---------~~e~~~l~~l~h~n---iv~l~~~~  216 (318)
                      ...+|...+.+-......|.+-.. +|..+.+|..+.......+.|         .+++..+.+++...   .+.++.+.
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            456777777777777777777766 467888887765433322222         23344444443222   22222222


Q ss_pred             Ee-----cCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCC
Q 021046          217 IE-----QGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMN  291 (318)
Q Consensus       217 ~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~  291 (318)
                      ..     ....+|+|||++|-.|.++..       ++.    .++..+.+++.-||+.|   +.|+|..|.|++++++ .
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~-~  172 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN-G  172 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-c
Confidence            21     234579999999988866541       222    24566778899999988   9999999999999854 4


Q ss_pred             ceEeecccceee
Q 021046          292 PKISDFGMARIF  303 (318)
Q Consensus       292 ~ki~DfGla~~~  303 (318)
                      +++.||+..+..
T Consensus       173 i~iID~~~k~~~  184 (229)
T PF06176_consen  173 IRIIDTQGKRMS  184 (229)
T ss_pred             EEEEECcccccc
Confidence            999999987643


No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.59  E-value=8.3e-07  Score=75.83  Aligned_cols=141  Identities=15%  Similarity=0.134  Sum_probs=86.8

Q ss_pred             ccccCCc-ccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC-CCccceEEEEEEecCeeEEEEEeccCCChh
Q 021046          158 KLGEGGF-GPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ-HRHLVRLFGCCIEQGENILIYEYMPNKSLD  235 (318)
Q Consensus       158 ~lg~G~f-g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~  235 (318)
                      .|..|.. ..||+.... +..+.+|......   .....+|+.++..+. +--+.+++++....+..++|||+++|.++.
T Consensus         5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            4555665 778999764 4678888876543   345677888888774 344667888777767789999999998876


Q ss_pred             hhh-------------------hcCCC-CCCCCH--HHHHHHHH--------------------HHHHHHHHHHh----c
Q 021046          236 VFL-------------------FYPKK-KRLLGW--QARVRIIE--------------------GIAQGLLYLHQ----Y  269 (318)
Q Consensus       236 ~~l-------------------~~~~~-~~~l~~--~~~~~i~~--------------------~i~~~l~yLH~----~  269 (318)
                      ...                   +.... ...+..  ........                    .+...+..|-.    .
T Consensus        81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (244)
T cd05150          81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE  160 (244)
T ss_pred             HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence            431                   11000 001110  00000000                    01111222211    1


Q ss_pred             CCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          270 SRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       270 ~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ..+.++|+|+.|.||+++++..+.|+||+.|..
T Consensus       161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            234599999999999999988889999998864


No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.58  E-value=5.2e-07  Score=84.09  Aligned_cols=140  Identities=17%  Similarity=0.210  Sum_probs=90.5

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCcC-------------------------------------HHHHHHHHH
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQG-------------------------------------LTEFKNEMM  199 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-------------------------------------~~~~~~e~~  199 (318)
                      +.||..+.|+||+|++++|+.||||+-++.-...                                     .-+|.+|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            5899999999999999999999999765431110                                     012334444


Q ss_pred             HHhc----cCCCc------cceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 021046          200 LIAK----LQHRH------LVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQY  269 (318)
Q Consensus       200 ~l~~----l~h~n------iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~  269 (318)
                      -..+    ++|-+      |++++..  -...+.|+||||+|..+.+.....+  ..++......-+.+...-+-+-|  
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i~~~l~~~~~~qIf~~--  320 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDK--RGISPHDILNKLVEAYLEQIFKT--  320 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHH--cCCCHHHHHHHHHHHHHHHHHhc--
Confidence            3322    23444      3344322  2357899999999998877654332  23444433333333322222222  


Q ss_pred             CCCCeeecCCCCCCEEEcC----CCCceEeecccceeecC
Q 021046          270 SRLRIIHRDLKASNILLDS----DMNPKISDFGMARIFGG  305 (318)
Q Consensus       270 ~~~~ivH~Dlk~~Nill~~----~~~~ki~DfGla~~~~~  305 (318)
                         +++|+|-.|-||+++.    ++++.+-|||+.+.+..
T Consensus       321 ---GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 ---GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             ---CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence               3999999999999984    67899999999887653


No 461
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.52  E-value=1e-06  Score=74.35  Aligned_cols=145  Identities=23%  Similarity=0.210  Sum_probs=86.0

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCC--ccceEEEEEEec---CeeEEEEEecc
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR--HLVRLFGCCIEQ---GENILIYEYMP  230 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~~  230 (318)
                      ++.++.|..+.||+....+ ..+++|.....  .....+..|..++..+...  .+.+++......   ...+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3578999999999999877 58999987653  3456778888888888533  356777655433   34689999999


Q ss_pred             CCChhh----------------hh---hcC-CCCCCCCHHHH---------HHH------------HHHHHH-HHHHHHh
Q 021046          231 NKSLDV----------------FL---FYP-KKKRLLGWQAR---------VRI------------IEGIAQ-GLLYLHQ  268 (318)
Q Consensus       231 ~g~L~~----------------~l---~~~-~~~~~l~~~~~---------~~i------------~~~i~~-~l~yLH~  268 (318)
                      +..+..                .+   +.. .......+...         ...            ...+.. .+..+++
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            988876                11   111 01111111100         000            011222 2333332


Q ss_pred             ----cCCCCeeecCCCCCCEEEc-CCCCceEeecccceee
Q 021046          269 ----YSRLRIIHRDLKASNILLD-SDMNPKISDFGMARIF  303 (318)
Q Consensus       269 ----~~~~~ivH~Dlk~~Nill~-~~~~~ki~DfGla~~~  303 (318)
                          .....++|+|+.|.||+++ +++.+.|.||+.+..-
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence                1345699999999999999 5666689999988654


No 462
>PLN02876 acyl-CoA dehydrogenase
Probab=98.50  E-value=3.1e-06  Score=84.72  Aligned_cols=79  Identities=18%  Similarity=0.393  Sum_probs=58.3

Q ss_pred             ccccccCCcccEEEEEecCC---cEEEEEEccCCC-CcCHHHHHHHHHHHhccC-CCcc--ceEEEEEEec---CeeEEE
Q 021046          156 QCKLGEGGFGPVYKGRLLNG---QEVAVKRLSNQS-GQGLTEFKNEMMLIAKLQ-HRHL--VRLFGCCIEQ---GENILI  225 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~---~~vavK~l~~~~-~~~~~~~~~e~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv  225 (318)
                      .+.++.|.+..+|+....++   ..+++|+..... ......+.+|+.++..+. |+++  ++++++|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            46789999999999877554   367777765432 223457889999999995 6665  7888888764   467899


Q ss_pred             EEeccCCCh
Q 021046          226 YEYMPNKSL  234 (318)
Q Consensus       226 ~e~~~~g~L  234 (318)
                      |||+++..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998654


No 463
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.48  E-value=2.5e-06  Score=71.32  Aligned_cols=154  Identities=19%  Similarity=0.222  Sum_probs=99.1

Q ss_pred             cHHHHHHHhcCCcccc---ccccCCcccEEEEEecCCcEEEEEEccCCCCc-------------------CHHH-----H
Q 021046          142 SLASVSAATENFSTQC---KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQ-------------------GLTE-----F  194 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~---~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-------------------~~~~-----~  194 (318)
                      +...+....++..+..   .|.+|.-+.||+|...++..+|||+++.....                   ....     .
T Consensus        36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~  115 (268)
T COG1718          36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA  115 (268)
T ss_pred             HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence            4444444444444444   45567777899998888999999988643211                   1111     1


Q ss_pred             HHHHHHHhccC--CCccceEEEEEEecCeeEEEEEeccCCCh-hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 021046          195 KNEMMLIAKLQ--HRHLVRLFGCCIEQGENILIYEYMPNKSL-DVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSR  271 (318)
Q Consensus       195 ~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~  271 (318)
                      .+|..-|.++.  +-.+++.+++.    +..|||||+..... .-.|    ....+...+...+..++++.+.-|-... 
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~~l~~~a-  186 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMRRLYKEA-  186 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHHHHHHhc-
Confidence            34555565553  34445555443    45799999965421 1111    1122233356677888888888887633 


Q ss_pred             CCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          272 LRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       272 ~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                       ++||+||..-|||+. ++.+.|+|||=|......
T Consensus       187 -~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         187 -GLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             -CcccccchhhheEEE-CCeEEEEECccccccCCC
Confidence             499999999999998 999999999998776543


No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.28  E-value=8e-06  Score=69.39  Aligned_cols=73  Identities=12%  Similarity=0.198  Sum_probs=46.2

Q ss_pred             cccccCCcc-cEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCC---ccceEEEEEEec---CeeEEEEEec
Q 021046          157 CKLGEGGFG-PVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR---HLVRLFGCCIEQ---GENILIYEYM  229 (318)
Q Consensus       157 ~~lg~G~fg-~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~e~~  229 (318)
                      +.++.|+.. .||+.    +..+.+|....  ......+..|..++..+...   -+.+.++.....   ...+++||++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            567777766 48875    23466676543  22345788999998877532   344555544332   2348899999


Q ss_pred             cCCChh
Q 021046          230 PNKSLD  235 (318)
Q Consensus       230 ~~g~L~  235 (318)
                      +|.++.
T Consensus        77 ~G~~l~   82 (235)
T cd05155          77 EGETAT   82 (235)
T ss_pred             cCCCCC
Confidence            997774


No 465
>PRK10593 hypothetical protein; Provisional
Probab=98.26  E-value=2.7e-05  Score=68.50  Aligned_cols=78  Identities=13%  Similarity=0.125  Sum_probs=57.7

Q ss_pred             ccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCC---CccceEEEEEEe---cCeeEEEEE
Q 021046          154 STQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQH---RHLVRLFGCCIE---QGENILIYE  227 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~---~~~~~lv~e  227 (318)
                      ...+.||.|..+.||+....+++ +.+|..+.  ......+..|...++.|.-   ..+++.++++..   .+..++|||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             heeeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            34568999999999999776664 55666433  1133578899999988853   468888888764   366899999


Q ss_pred             eccCCCh
Q 021046          228 YMPNKSL  234 (318)
Q Consensus       228 ~~~~g~L  234 (318)
                      +++++++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998765


No 466
>PF13095 FTA2:  Kinetochore Sim4 complex subunit FTA2
Probab=98.18  E-value=2.5e-05  Score=63.78  Aligned_cols=125  Identities=24%  Similarity=0.385  Sum_probs=91.0

Q ss_pred             cCCccccccccCCc-ccEEEEEecCCcEEEEEEccC---CC--------C----------cCHHHHHHHHHHHhccC---
Q 021046          151 ENFSTQCKLGEGGF-GPVYKGRLLNGQEVAVKRLSN---QS--------G----------QGLTEFKNEMMLIAKLQ---  205 (318)
Q Consensus       151 ~~~~~~~~lg~G~f-g~Vy~~~~~~~~~vavK~l~~---~~--------~----------~~~~~~~~e~~~l~~l~---  205 (318)
                      .+++..+.||.|.- |.||+++. +|+.+|+|.++.   ..        .          ...+.|..|.+..++|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78888999999999 99999998 567999998321   00        0          12346889999888886   


Q ss_pred             CCcc--ceEEEEEEecC------------------eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 021046          206 HRHL--VRLFGCCIEQG------------------ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLY  265 (318)
Q Consensus       206 h~ni--v~l~~~~~~~~------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~y  265 (318)
                      +.++  |+.+||..-..                  .+.+|.||++...            .+.    ..-+.+|.+-|..
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~~  179 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLKI  179 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHHH
Confidence            4466  89999985331                  1357888776543            111    1234567788889


Q ss_pred             HHhcCCCCeeecCCCCCCEEEcCCCCceEeecccc
Q 021046          266 LHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       266 LH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      +|..+   |+-+|+++.|..     .-||+|||.+
T Consensus       180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence            99877   999999999976     3589999875


No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.15  E-value=3.6e-05  Score=65.26  Aligned_cols=141  Identities=21%  Similarity=0.294  Sum_probs=81.8

Q ss_pred             cccccCCcccEEEEEecC--CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCcc-ceEEEEEEecCeeEEEEEeccCCC
Q 021046          157 CKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL-VRLFGCCIEQGENILIYEYMPNKS  233 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~--~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~  233 (318)
                      +.|..|-...+|+....+  +..+.+|........ ..+..+|+.++..+...++ +++++.+.    ..++|||+++.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            467778888999998764  567888876543222 2234578888888854333 44444322    248999999877


Q ss_pred             hhhh-----------------hhcCCCC--------CCCC-HHHHHHHHH----------------------HHHHHHHH
Q 021046          234 LDVF-----------------LFYPKKK--------RLLG-WQARVRIIE----------------------GIAQGLLY  265 (318)
Q Consensus       234 L~~~-----------------l~~~~~~--------~~l~-~~~~~~i~~----------------------~i~~~l~y  265 (318)
                      +...                 ++.....        .... +.....+..                      .+...+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            6321                 0111100        0111 222111111                      11111111


Q ss_pred             ----HHhc-CCCCeeecCCCCCCEEEcC-CCCceEeeccccee
Q 021046          266 ----LHQY-SRLRIIHRDLKASNILLDS-DMNPKISDFGMARI  302 (318)
Q Consensus       266 ----LH~~-~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~  302 (318)
                          +-.. ....++|+|+.+.|||++. ++.+.+.||-.|..
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence                1111 2345999999999999998 57899999998864


No 468
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=98.15  E-value=5e-05  Score=62.39  Aligned_cols=133  Identities=19%  Similarity=0.274  Sum_probs=88.5

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCC----------------CcCHHHHHHHHHHHhccC------CCccceEE
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS----------------GQGLTEFKNEMMLIAKLQ------HRHLVRLF  213 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~e~~~l~~l~------h~niv~l~  213 (318)
                      ...||+|+.=.||.  +++.....||+.....                ....++..+|+.-...+.      +.+|.+++
T Consensus         6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            45799999999986  4555667888876544                223456777777555554      88999999


Q ss_pred             EEEEecCeeEEEEEeccC--C----ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEc
Q 021046          214 GCCIEQGENILIYEYMPN--K----SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLD  287 (318)
Q Consensus       214 ~~~~~~~~~~lv~e~~~~--g----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~  287 (318)
                      |+..++.-.-+|+|.+.+  |    +|.+++    ....++. .   +...+-+-..||-+.+   |+.+|++|.||++.
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l----~~~~~~~-~---~~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYL----KEGGLTE-E---LRQALDEFKRYLLDHH---IVIRDLNPHNIVVQ  152 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHH----HcCCccH-H---HHHHHHHHHHHHHHcC---CeecCCCcccEEEE
Confidence            999999888999998743  3    344455    2223443 2   2233334455666555   99999999999995


Q ss_pred             CCC----CceEee-cccce
Q 021046          288 SDM----NPKISD-FGMAR  301 (318)
Q Consensus       288 ~~~----~~ki~D-fGla~  301 (318)
                      ...    .+.|.| ||-..
T Consensus       153 ~~~~~~~~lvlIDG~G~~~  171 (199)
T PF10707_consen  153 RRDSGEFRLVLIDGLGEKE  171 (199)
T ss_pred             ecCCCceEEEEEeCCCCcc
Confidence            432    355555 44433


No 469
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.10  E-value=3.5e-05  Score=66.35  Aligned_cols=139  Identities=16%  Similarity=0.091  Sum_probs=79.6

Q ss_pred             ccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCcc-ceEEEEEEecCeeEEEEEeccCCChhh
Q 021046          158 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL-VRLFGCCIEQGENILIYEYMPNKSLDV  236 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L~~  236 (318)
                      .+..|-...+|+... ++..+++|..........-+..+|..++..+....+ .++++..    ..++||||++|..+..
T Consensus         3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITL   77 (256)
T ss_pred             cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCccccc
Confidence            355677888998874 566788887654322211245778888888864433 3444443    2479999999877642


Q ss_pred             h-----------------hhcCC-CCCCCCHHH-HHHHHHHH---------HHHHHHHHhc-----CCCCeeecCCCCCC
Q 021046          237 F-----------------LFYPK-KKRLLGWQA-RVRIIEGI---------AQGLLYLHQY-----SRLRIIHRDLKASN  283 (318)
Q Consensus       237 ~-----------------l~~~~-~~~~l~~~~-~~~i~~~i---------~~~l~yLH~~-----~~~~ivH~Dlk~~N  283 (318)
                      .                 +|... ....++... ...+..++         ...+..+-..     .+..++|+|+.|.|
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N  157 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN  157 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence            1                 11111 111222211 11111111         1112222111     12358999999999


Q ss_pred             EEEcCCCCceEeeccccee
Q 021046          284 ILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       284 ill~~~~~~ki~DfGla~~  302 (318)
                      |++++++ +.|.||..|..
T Consensus       158 il~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       158 LVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEEeCCC-CEEEeccccCc
Confidence            9999877 78999998864


No 470
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.04  E-value=7.9e-05  Score=59.18  Aligned_cols=130  Identities=20%  Similarity=0.236  Sum_probs=87.5

Q ss_pred             ccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccce-EEEEEEecCeeEEEEEeccCC
Q 021046          154 STQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLVR-LFGCCIEQGENILIYEYMPNK  232 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lv~e~~~~g  232 (318)
                      ...+.|++|++|.||++.+.+ .++|+|.=+.+  .....+..|+++|..++-.++.+ ++.+.    ..++.|||+.|-
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~-~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRG-GEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeeccC-ceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence            345689999999999999854 48888876543  34467899999999998766643 55443    334569999998


Q ss_pred             ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC-CCCEEEcCCCCceEeecccceee
Q 021046          233 SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLK-ASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       233 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk-~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      .|.+.-..      .+.+....    +++.---|-..+   |-|+.|. |...++..+..+.|+||--|..-
T Consensus        98 ~L~~~~~~------~~rk~l~~----vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112          98 PLGKLEIG------GDRKHLLR----VLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             chhhhhhc------ccHHHHHH----HHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            87654411      12233333    333322222223   8888884 66666667779999999999843


No 471
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.97  E-value=0.00013  Score=64.22  Aligned_cols=143  Identities=19%  Similarity=0.160  Sum_probs=86.4

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCc--cceEEEE------EEecCeeEEEEE
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRH--LVRLFGC------CIEQGENILIYE  227 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~e  227 (318)
                      .+.+..|....+|+....+ ..+++|....   ........|+.++..+.+.+  +++++..      ....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            4567778888999987654 4688888764   23345667888777775332  4454432      233456789999


Q ss_pred             eccCCChhhh--------------hhcCC--------CCCCCCHHHHH----------HHHHHHHHHHHHHHh----cCC
Q 021046          228 YMPNKSLDVF--------------LFYPK--------KKRLLGWQARV----------RIIEGIAQGLLYLHQ----YSR  271 (318)
Q Consensus       228 ~~~~g~L~~~--------------l~~~~--------~~~~l~~~~~~----------~i~~~i~~~l~yLH~----~~~  271 (318)
                      |++|..+...              ++...        ......|....          .....+..++.++..    ..+
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            9998776320              01000        00112222211          011123344455443    123


Q ss_pred             CCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          272 LRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       272 ~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ..++|+|+.|.|+++++++.+.|.||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4599999999999999987789999998753


No 472
>smart00473 PAN_AP divergent subfamily of APPLE domains. Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.
Probab=97.93  E-value=1.6e-05  Score=54.80  Aligned_cols=38  Identities=47%  Similarity=1.145  Sum_probs=31.0

Q ss_pred             ChhHHHHHhhc-cCCccceecccccCCCCceEEec-ccccccc
Q 021046            2 NLNQCQAKCLK-NCSCRAYANSKLTGGGSGCLMWF-GDLIDLR   42 (318)
Q Consensus         2 ~~~~C~~~Cl~-~C~C~a~~~~~~~~~~~~C~~w~-~~l~~~~   42 (318)
                      +.++|++.|+. +|+|.||.|.+   ++.+|.+|. +.+.+..
T Consensus        26 s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~   65 (78)
T smart00473       26 SLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDAR   65 (78)
T ss_pred             CHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccce
Confidence            67899999999 99999999864   456899999 6555543


No 473
>PRK05231 homoserine kinase; Provisional
Probab=97.92  E-value=0.00055  Score=60.92  Aligned_cols=141  Identities=18%  Similarity=0.206  Sum_probs=76.9

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCC--ccceEEE------EEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR--HLVRLFG------CCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~------~~~~~~~~~lv~e~  228 (318)
                      +.++.|....+|+....+| .+++|++...   ..+....|+.++..|...  .+.+.+.      +....+..++++||
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            4566777788999887655 6788887521   223334455555555321  2334332      12335667899999


Q ss_pred             ccCCChhh-----h---------hhcCCC--------CCCCCH-HHHHH-H-----------H-HHHHHHHHHHHhc---
Q 021046          229 MPNKSLDV-----F---------LFYPKK--------KRLLGW-QARVR-I-----------I-EGIAQGLLYLHQY---  269 (318)
Q Consensus       229 ~~~g~L~~-----~---------l~~~~~--------~~~l~~-~~~~~-i-----------~-~~i~~~l~yLH~~---  269 (318)
                      ++|..+..     .         ++....        ...+.| ..... +           . ..+...+..+...   
T Consensus       104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  183 (319)
T PRK05231        104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP  183 (319)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence            99875421     0         111000        011112 11111 0           1 1111122233211   


Q ss_pred             -CCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          270 -SRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       270 -~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                       -+..++|+|+.|.||+++.+...-|.||+.+.
T Consensus       184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence             23469999999999999876666899999875


No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.87  E-value=0.00032  Score=63.83  Aligned_cols=75  Identities=15%  Similarity=0.220  Sum_probs=54.4

Q ss_pred             cccccCCcccEEEEEecCC-cEEEEEEccCC------C-CcCHHHHHHHHHHHhccC---CCccceEEEEEEecCeeEEE
Q 021046          157 CKLGEGGFGPVYKGRLLNG-QEVAVKRLSNQ------S-GQGLTEFKNEMMLIAKLQ---HRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~-~~vavK~l~~~------~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv  225 (318)
                      +.||.|.+..||+....+| +.+.||.-...      . +...+++..|...|..+.   -.++++++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            5799999999999998776 48999975321      1 224567788888877763   3457777766  44567899


Q ss_pred             EEeccCCC
Q 021046          226 YEYMPNKS  233 (318)
Q Consensus       226 ~e~~~~g~  233 (318)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998744


No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.78  E-value=0.0012  Score=58.31  Aligned_cols=143  Identities=20%  Similarity=0.210  Sum_probs=82.4

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCC--ccceEEEEE------EecCeeEEEEE
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR--HLVRLFGCC------IEQGENILIYE  227 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~------~~~~~~~lv~e  227 (318)
                      .+.++.|.-..+|+....++ .+.+|.....  ...++...|+.++..|...  .+++++...      ...+..++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEeCCC-cEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            45677777789999876555 5667876542  1234455667777666422  244444321      22456789999


Q ss_pred             eccCCChhhh--------------hhcCCCC---------CCCCHHHHH------------HHHHHHHHHHHHHHh----
Q 021046          228 YMPNKSLDVF--------------LFYPKKK---------RLLGWQARV------------RIIEGIAQGLLYLHQ----  268 (318)
Q Consensus       228 ~~~~g~L~~~--------------l~~~~~~---------~~l~~~~~~------------~i~~~i~~~l~yLH~----  268 (318)
                      |++|..+...              ++.....         ..-.|....            .....+...++++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            9998654210              1110000         011121110            011123345555542    


Q ss_pred             cCCCCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          269 YSRLRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       269 ~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      ..+..++|+|+.+.|++++.++...|.||+.+.
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             cCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            223569999999999999988877899999884


No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.75  E-value=0.00033  Score=61.82  Aligned_cols=141  Identities=27%  Similarity=0.356  Sum_probs=83.4

Q ss_pred             cccccCCcccEEEEEecC-------CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCcc-ceEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLN-------GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL-VRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~  228 (318)
                      +.+..|-...+|+....+       ++.+++|...... ....+..+|..++..+....+ .++++++.    -.+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhe
Confidence            455566667899887654       4788888875533 233455778888877753333 34555543    2468999


Q ss_pred             ccCCChhhh-----------------hhcCCCCC------CCC--HHHHHH--------------------------HHH
Q 021046          229 MPNKSLDVF-----------------LFYPKKKR------LLG--WQARVR--------------------------IIE  257 (318)
Q Consensus       229 ~~~g~L~~~-----------------l~~~~~~~------~l~--~~~~~~--------------------------i~~  257 (318)
                      ++|..+...                 +|......      ..+  |.....                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            998776431                 11111000      010  111111                          111


Q ss_pred             HHHHHHHHHHh------cCCCCeeecCCCCCCEEEcCC----CCceEeeccccee
Q 021046          258 GIAQGLLYLHQ------YSRLRIIHRDLKASNILLDSD----MNPKISDFGMARI  302 (318)
Q Consensus       258 ~i~~~l~yLH~------~~~~~ivH~Dlk~~Nill~~~----~~~ki~DfGla~~  302 (318)
                      .+...+.+|-.      ..+..++|+|+.|.||+++++    +.+.++||..|..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22223334432      234578999999999999985    8899999998874


No 477
>PF03881 Fructosamin_kin:  Fructosamine kinase;  InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.52  E-value=0.0011  Score=57.84  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=48.8

Q ss_pred             ccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC---CCccceEEEEEEecCeeEEEEEecc
Q 021046          154 STQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ---HRHLVRLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       154 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~  230 (318)
                      ...+.++.|....+|+.. .+++.+.||.-..   .....|..|..-|+.|.   --.+++.+++...++..+||+||++
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeEecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            445678889999999987 5677899997763   22346888888777773   4568889999988888899999998


Q ss_pred             CC
Q 021046          231 NK  232 (318)
Q Consensus       231 ~g  232 (318)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            77


No 478
>PLN02236 choline kinase
Probab=97.49  E-value=0.0019  Score=58.11  Aligned_cols=142  Identities=17%  Similarity=0.218  Sum_probs=82.8

Q ss_pred             cccccCCcccEEEEEecC-----CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccc-eEEEEEEecCeeEEEEEecc
Q 021046          157 CKLGEGGFGPVYKGRLLN-----GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV-RLFGCCIEQGENILIYEYMP  230 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~-----~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~  230 (318)
                      ..+-.|-.-.+|+....+     ++.+.+|..........+ -.+|..++..+...++. ++++.+..+    .|+||++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence            355557778899987543     357888877654433323 37788888888654444 455655322    5899998


Q ss_pred             CCChhhh-----------------hhcCC-C--CCCCCHHHHHHHHHH-----------------HHHHHHHH----Hh-
Q 021046          231 NKSLDVF-----------------LFYPK-K--KRLLGWQARVRIIEG-----------------IAQGLLYL----HQ-  268 (318)
Q Consensus       231 ~g~L~~~-----------------l~~~~-~--~~~l~~~~~~~i~~~-----------------i~~~l~yL----H~-  268 (318)
                      +.++...                 +|... .  .....|.....+..+                 +...+..|    .. 
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            8776421                 11111 0  111123332222211                 11112222    21 


Q ss_pred             cCCCCeeecCCCCCCEEEcC-CCCceEeecccceee
Q 021046          269 YSRLRIIHRDLKASNILLDS-DMNPKISDFGMARIF  303 (318)
Q Consensus       269 ~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~~  303 (318)
                      .....++|+|+++.||++++ ++.+.++||..|..-
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence            22346899999999999986 478999999988743


No 479
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.47  E-value=0.0024  Score=56.30  Aligned_cols=144  Identities=17%  Similarity=0.235  Sum_probs=80.8

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccC--CCCcCHHHHHHHHHHHhccCC--CccceEEEEEEecC--eeEEEEEecc
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLTEFKNEMMLIAKLQH--RHLVRLFGCCIEQG--ENILIYEYMP  230 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~--~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~--~~~lv~e~~~  230 (318)
                      +.+..|.--.+|..... ++++++. ...  ..........+|..+++.+.-  .-+...++.|.++.  ..+.||+|++
T Consensus        31 ~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~ve  108 (321)
T COG3173          31 EEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVE  108 (321)
T ss_pred             eeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEec
Confidence            33433333345555443 6677777 331  223344566778888877743  33445667777665  6699999998


Q ss_pred             CCChhhhhhcCCCC-----------------------------------CCCCHHHHHHHH--------HHHHHHHHHHH
Q 021046          231 NKSLDVFLFYPKKK-----------------------------------RLLGWQARVRII--------EGIAQGLLYLH  267 (318)
Q Consensus       231 ~g~L~~~l~~~~~~-----------------------------------~~l~~~~~~~i~--------~~i~~~l~yLH  267 (318)
                      +......+......                                   +.-.|......+        -....-..||+
T Consensus       109 Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~  188 (321)
T COG3173         109 GEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLE  188 (321)
T ss_pred             ceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence            85443322110000                                   000111111000        01122233443


Q ss_pred             hc-----CCCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          268 QY-----SRLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       268 ~~-----~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      ++     ++..++|+|+.+.|++++.+..+-|.||+++.+
T Consensus       189 ~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         189 ANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             hcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            32     234699999999999999999999999999975


No 480
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=97.47  E-value=0.0011  Score=57.77  Aligned_cols=31  Identities=29%  Similarity=0.562  Sum_probs=26.2

Q ss_pred             CCeeecCCCCCCEEEcCCCC-ceEeeccccee
Q 021046          272 LRIIHRDLKASNILLDSDMN-PKISDFGMARI  302 (318)
Q Consensus       272 ~~ivH~Dlk~~Nill~~~~~-~ki~DfGla~~  302 (318)
                      ..++|+|+.|.||++++++. .-|.||+.|.+
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            45899999999999997555 56999999875


No 481
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.35  E-value=2.5e-05  Score=76.84  Aligned_cols=150  Identities=18%  Similarity=0.185  Sum_probs=100.1

Q ss_pred             HHhcCCccccccccCCcccEEEEEec-CCcEEEEEEccCC---CCcCHHHHHHHHHHHhccCCCccceEEEEEEecCeeE
Q 021046          148 AATENFSTQCKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQ---SGQGLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENI  223 (318)
Q Consensus       148 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  223 (318)
                      ...+.+.+.+.+-+|.|+.++.+.-. .|...++|.....   .....+....+-.++-..++|.+++..--+.-..+.+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            34567777788889999999987532 2323333322211   1112222223333333345566666555555667889


Q ss_pred             EEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceee
Q 021046          224 LIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIF  303 (318)
Q Consensus       224 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~  303 (318)
                      |+++|..+++|...|+...   ..+..........+..+++|||..-   +.|+|++|.|.+...++..+++|||+....
T Consensus       881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence            9999999999988885432   3444444455566888999999865   899999999999999999999999965443


No 482
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.28  E-value=0.002  Score=57.33  Aligned_cols=142  Identities=18%  Similarity=0.157  Sum_probs=96.4

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCC------C----------------CcCHHH----HHHHHHHHhccCCCcc
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ------S----------------GQGLTE----FKNEMMLIAKLQHRHL  209 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~------~----------------~~~~~~----~~~e~~~l~~l~h~ni  209 (318)
                      .-.|..|.-+.||.+.-.+|..+|||+++-.      .                ....+.    ...|++-|.+|+...|
T Consensus       149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI  228 (520)
T KOG2270|consen  149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI  228 (520)
T ss_pred             ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3467788899999999989999999977521      0                000111    2457778888866554


Q ss_pred             ceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCC
Q 021046          210 VRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSD  289 (318)
Q Consensus       210 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~  289 (318)
                      ...--...  ....|||+|+..-.-   -.-.-....++...+..+-.|++.-|.-|-+.+  ++||.||.--|+|+ .+
T Consensus       229 P~PePIlL--k~hVLVM~FlGrdgw---~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly-hd  300 (520)
T KOG2270|consen  229 PCPEPILL--KNHVLVMEFLGRDGW---AAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY-HD  300 (520)
T ss_pred             CCCCceee--ecceEeeeeccCCCC---cCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE-EC
Confidence            42211111  345799999963221   111113345666677778888888888888877  59999999999998 67


Q ss_pred             CCceEeecccceeecC
Q 021046          290 MNPKISDFGMARIFGG  305 (318)
Q Consensus       290 ~~~ki~DfGla~~~~~  305 (318)
                      |.+.|+|.+-+.-...
T Consensus       301 G~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  301 GKLYIIDVSQSVEHDH  316 (520)
T ss_pred             CEEEEEEccccccCCC
Confidence            8899999987765443


No 483
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.11  E-value=0.00066  Score=59.26  Aligned_cols=145  Identities=16%  Similarity=0.148  Sum_probs=95.4

Q ss_pred             cccHHHHHHHhcCCccccccccCCcccEEEEEecCCcEEEEEEccC----------C----------CCcCH--HHHHHH
Q 021046          140 LFSLASVSAATENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSN----------Q----------SGQGL--TEFKNE  197 (318)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~----------~----------~~~~~--~~~~~e  197 (318)
                      ...+.++.....-+..++.||-|.-+.||.+-..+|.+.++|.-+-          .          +....  -...+|
T Consensus        81 yLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kE  160 (465)
T KOG2268|consen   81 YLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKE  160 (465)
T ss_pred             HHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHH
Confidence            3445555544455678899999999999999998899988872210          0          01111  134567


Q ss_pred             HHHHhccCC--CccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 021046          198 MMLIAKLQH--RHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRII  275 (318)
Q Consensus       198 ~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv  275 (318)
                      ...|+.|.-  --+++.+++    +..++|||++.+-.|...-+      ..+..++.   ..+..-+.-|..+|   +|
T Consensus       161 fafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly---~~lm~~Iv~la~~G---lI  224 (465)
T KOG2268|consen  161 FAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRH------VEDPPTLY---DDLMGLIVRLANHG---LI  224 (465)
T ss_pred             HHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeee------cCChHHHH---HHHHHHHHHHHHcC---ce
Confidence            777877753  224444444    45689999998877754321      22233332   23333344555555   99


Q ss_pred             ecCCCCCCEEEcCCCCceEeecccc
Q 021046          276 HRDLKASNILLDSDMNPKISDFGMA  300 (318)
Q Consensus       276 H~Dlk~~Nill~~~~~~ki~DfGla  300 (318)
                      |+|..-=||+++++..++++||--.
T Consensus       225 HgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  225 HGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             ecccchheeEEecCCCEEEeechHh
Confidence            9999999999999999999999743


No 484
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.04  E-value=0.0001  Score=69.23  Aligned_cols=142  Identities=16%  Similarity=0.082  Sum_probs=95.2

Q ss_pred             hcCCccccccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCc-cceEEEEEEecCeeEEEEEe
Q 021046          150 TENFSTQCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRH-LVRLFGCCIEQGENILIYEY  228 (318)
Q Consensus       150 ~~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~  228 (318)
                      +..+...+-+++|+++++++.+....+....+.+...     ....-++++|.+++||| .+..++-+..++..+++++|
T Consensus       241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i  315 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI  315 (829)
T ss_pred             ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence            3444445678899999999986533333335544321     34566888999999999 77777777777888999999


Q ss_pred             ccCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeecCC
Q 021046          229 MPNK-SLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFGGD  306 (318)
Q Consensus       229 ~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~~~  306 (318)
                      +..+ +-....  ......+...+...+...-+++++|||+..   -+|+|    ||+.. ++..|..||+.+..+.+.
T Consensus       316 ~s~~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s-~~~~~~~~~~v~~~L~~~  384 (829)
T KOG0576|consen  316 CSTGRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGS-EEEVKLLDFAVPPQLTRT  384 (829)
T ss_pred             hcCCccccccC--ChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----ccccc-ccccccccccCCcccCcc
Confidence            9887 221111  011112333334455666778899999754   58998    76664 488999999998877653


No 485
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.02  E-value=0.021  Score=52.12  Aligned_cols=73  Identities=11%  Similarity=0.073  Sum_probs=49.6

Q ss_pred             ccccccCCcccEEEEEecCCcEEEEEEccCC----CC---cCHHHHHHHHHHHhccC---CCccceEEEEEEecCeeEEE
Q 021046          156 QCKLGEGGFGPVYKGRLLNGQEVAVKRLSNQ----SG---QGLTEFKNEMMLIAKLQ---HRHLVRLFGCCIEQGENILI  225 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~----~~---~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv  225 (318)
                      .+.||-|....||+.... +..+.||.-...    ..   ....+-..|+..|..+.   ..++++++.++.  +..+++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence            467899999999998864 456889865521    11   13344455566665553   357888888877  456889


Q ss_pred             EEeccC
Q 021046          226 YEYMPN  231 (318)
Q Consensus       226 ~e~~~~  231 (318)
                      |||+++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999977


No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.81  E-value=0.019  Score=51.52  Aligned_cols=73  Identities=16%  Similarity=0.243  Sum_probs=47.6

Q ss_pred             ccccCCcccEEEEEecCC-cEEEEEEccC------CC-CcCHHHHHHHHHHHhccC--CC-ccceEEEEEEecCeeEEEE
Q 021046          158 KLGEGGFGPVYKGRLLNG-QEVAVKRLSN------QS-GQGLTEFKNEMMLIAKLQ--HR-HLVRLFGCCIEQGENILIY  226 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~~-~~vavK~l~~------~~-~~~~~~~~~e~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~  226 (318)
                      .||-|...-||++..++| +.|.||.-..      .+ +-..++...|...|....  -| .+++++  +.+++...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence            478999999999998654 5799995431      11 334456667777776553  24 344454  34555667999


Q ss_pred             EeccCC
Q 021046          227 EYMPNK  232 (318)
Q Consensus       227 e~~~~g  232 (318)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            999653


No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.76  E-value=0.039  Score=48.72  Aligned_cols=29  Identities=28%  Similarity=0.357  Sum_probs=25.3

Q ss_pred             CCeeecCCCCCCEEEcCCCCceEeecccce
Q 021046          272 LRIIHRDLKASNILLDSDMNPKISDFGMAR  301 (318)
Q Consensus       272 ~~ivH~Dlk~~Nill~~~~~~ki~DfGla~  301 (318)
                      ..++|+|+.+.||+++. +.+.|.||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            46899999999999987 678999999654


No 488
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=96.71  E-value=0.0013  Score=44.70  Aligned_cols=33  Identities=24%  Similarity=0.578  Sum_probs=26.9

Q ss_pred             ChhHHHHHhhccCCccceecccccCCCCceEEeccc
Q 021046            2 NLNQCQAKCLKNCSCRAYANSKLTGGGSGCLMWFGD   37 (318)
Q Consensus         2 ~~~~C~~~Cl~~C~C~a~~~~~~~~~~~~C~~w~~~   37 (318)
                      +.++|++.|+.+|+|.||.|..   +...|+++.+.
T Consensus        26 s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~~   58 (73)
T cd01100          26 SAEQCQAACTADPGCLAFTYNT---KSKKCFLKSSE   58 (73)
T ss_pred             CHHHHHHHcCCCCCceEEEEEC---CCCeEEcccCC
Confidence            5689999999999999999853   34579987764


No 489
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.63  E-value=0.036  Score=49.39  Aligned_cols=136  Identities=25%  Similarity=0.326  Sum_probs=80.1

Q ss_pred             CcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCc------cceEEEEE--EecC--eeEEEEEeccCC
Q 021046          163 GFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRH------LVRLFGCC--IEQG--ENILIYEYMPNK  232 (318)
Q Consensus       163 ~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~--~~~~--~~~lv~e~~~~g  232 (318)
                      .-..+|+....+|+. ++|.....  ....+...|+..+..|.-.+      +..+=|-.  ...+  ..+-+++|++|.
T Consensus        37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~  113 (331)
T COG2334          37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR  113 (331)
T ss_pred             ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence            456789988877776 77877664  44456667777776663211      22222211  1223  778899999998


Q ss_pred             Chhh-h--------------hhc--------C-CCCCCCCHHH---H----------HHHHHHHHHHHHHHHhc----CC
Q 021046          233 SLDV-F--------------LFY--------P-KKKRLLGWQA---R----------VRIIEGIAQGLLYLHQY----SR  271 (318)
Q Consensus       233 ~L~~-~--------------l~~--------~-~~~~~l~~~~---~----------~~i~~~i~~~l~yLH~~----~~  271 (318)
                      .+.. .              ++.        . .......|..   .          .....++...++.+.+.    -+
T Consensus       114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp  193 (331)
T COG2334         114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP  193 (331)
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence            8872 1              010        0 0011233431   0          11233444444444432    11


Q ss_pred             C-C--eeecCCCCCCEEEcCCCC-ceEeecccce
Q 021046          272 L-R--IIHRDLKASNILLDSDMN-PKISDFGMAR  301 (318)
Q Consensus       272 ~-~--ivH~Dlk~~Nill~~~~~-~ki~DfGla~  301 (318)
                      . +  +||+|+.|.||+++.+.. +.+.||+-+.
T Consensus       194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             cccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            1 2  899999999999999885 9999999764


No 490
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.52  E-value=0.052  Score=45.39  Aligned_cols=74  Identities=19%  Similarity=0.293  Sum_probs=50.3

Q ss_pred             ccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhcc---CCCccceEEEEEEecCeeEEEEEeccCCCh
Q 021046          158 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKL---QHRHLVRLFGCCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       158 ~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  234 (318)
                      .+.-|.--.-|.... +..++-||+-..   .....|..|+.-|..|   +.-++.+.+.+....+..|+|+||++-|.+
T Consensus        23 ~v~gG~inea~~v~d-g~~~~FvK~n~~---~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          23 EVSGGDINEAWRLRD-GTDPFFVKCNQR---EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             ccCCccccceeEeec-CCcceEEEecch---hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            343333333343333 346788886433   4456788887755555   556788899999999999999999998877


Q ss_pred             h
Q 021046          235 D  235 (318)
Q Consensus       235 ~  235 (318)
                      +
T Consensus        99 d   99 (286)
T COG3001          99 D   99 (286)
T ss_pred             C
Confidence            5


No 491
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.49  E-value=0.012  Score=49.05  Aligned_cols=123  Identities=20%  Similarity=0.223  Sum_probs=60.3

Q ss_pred             CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCcc-ceEEEEEEecCeeEEEEEeccCCChhhhh---------------
Q 021046          175 GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHL-VRLFGCCIEQGENILIYEYMPNKSLDVFL---------------  238 (318)
Q Consensus       175 ~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L~~~l---------------  238 (318)
                      ++.|.|+..... ....-.-..|..+++.+...++ +++++.+..    .+|+||+++..|..--               
T Consensus         2 ~~~~~~Ri~g~~-t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~   76 (211)
T PF01633_consen    2 PEKYLVRIPGEG-TENFIDRENENEALKLLSEAGLGPKIIYFFEN----GRVEEFIEGRTLSPEDFRNPEILKRIAKLLA   76 (211)
T ss_dssp             TSEEEEEEEESC-GCSHHHHHHHHHHHHHHHHTTSSS-EEEEETT----EEEEE--SSEE--CGGGGSHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCC-cccccCHHHHHHHHHHHHHcCCCCeEEEEcCC----CcEEEEecccccChhhccChHHHHHHHHHHH
Confidence            356777777654 3444566788888888865555 445555432    3677999776653210               


Q ss_pred             --hcC----CCCCCCCHHHHHHH----------------------HHHHHHHHHHHHh----c-CCCCeeecCCCCCCEE
Q 021046          239 --FYP----KKKRLLGWQARVRI----------------------IEGIAQGLLYLHQ----Y-SRLRIIHRDLKASNIL  285 (318)
Q Consensus       239 --~~~----~~~~~l~~~~~~~i----------------------~~~i~~~l~yLH~----~-~~~~ivH~Dlk~~Nil  285 (318)
                        |..    .....--|.....+                      ...+..-+..+..    . .+..+.|+|+.|.||+
T Consensus        77 ~lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil  156 (211)
T PF01633_consen   77 KLHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNIL  156 (211)
T ss_dssp             HHHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEE
T ss_pred             HHhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEE
Confidence              000    00111112222121                      0111112222211    1 1234789999999999


Q ss_pred             E-cCCCCceEeeccccee
Q 021046          286 L-DSDMNPKISDFGMARI  302 (318)
Q Consensus       286 l-~~~~~~ki~DfGla~~  302 (318)
                      + +.++.++++||-.|..
T Consensus       157 ~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  157 INNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             ETSSSSCEEE--GTT-EE
T ss_pred             eccCCCeEEEecHHHHhh
Confidence            9 8999999999998864


No 492
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.48  E-value=0.037  Score=49.49  Aligned_cols=141  Identities=16%  Similarity=0.236  Sum_probs=79.3

Q ss_pred             cccccCCcccEEEEEecC----CcEEEEEEccCCCCcCHHHHHHHHHHHhccCCCccc-eEEEEEEecCeeEEEEEeccC
Q 021046          157 CKLGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV-RLFGCCIEQGENILIYEYMPN  231 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~  231 (318)
                      +.|..|-.-.+|+....+    +..+.+|........ .-+-.+|..++..+..-++. ++++++. .+   +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence            345456667788886543    237888877554332 22346788888888655553 5565553 22   58999987


Q ss_pred             CChhhh-----------------hhcCC-C-CC-CCCHHHHHHHHHHH----------------------HHHHH----H
Q 021046          232 KSLDVF-----------------LFYPK-K-KR-LLGWQARVRIIEGI----------------------AQGLL----Y  265 (318)
Q Consensus       232 g~L~~~-----------------l~~~~-~-~~-~l~~~~~~~i~~~i----------------------~~~l~----y  265 (318)
                      ..|..-                 +|... . .. .--|.....+..++                      ..-+.    +
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            766321                 11111 0 01 11233222222111                      11111    2


Q ss_pred             HHh-cCCCCeeecCCCCCCEEEcC-CCCceEeeccccee
Q 021046          266 LHQ-YSRLRIIHRDLKASNILLDS-DMNPKISDFGMARI  302 (318)
Q Consensus       266 LH~-~~~~~ivH~Dlk~~Nill~~-~~~~ki~DfGla~~  302 (318)
                      +.. ..+.-+.|+|+-|.||++++ ++.++++||..|-.
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            211 12234789999999999975 57899999998864


No 493
>PRK06148 hypothetical protein; Provisional
Probab=96.42  E-value=0.083  Score=54.44  Aligned_cols=141  Identities=21%  Similarity=0.265  Sum_probs=75.8

Q ss_pred             cccccCCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccC--CCc--cceEEE--------EEEe-cC--e
Q 021046          157 CKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQ--HRH--LVRLFG--------CCIE-QG--E  221 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~--h~n--iv~l~~--------~~~~-~~--~  221 (318)
                      +.|+ |..-.+|+.+..+|..+++|+.+....  ......|...+..|.  ++.  +.+.+-        .... ++  .
T Consensus        31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~--~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEP--RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEeCCCCeEEEEEcCCccc--hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            3453 456788998887888899999876432  223344444554442  122  222221        1111 22  4


Q ss_pred             eEEEEEeccCCChhhhh-----------------h-------cCCCCCCCCHHH-----------------HHHHHHHHH
Q 021046          222 NILIYEYMPNKSLDVFL-----------------F-------YPKKKRLLGWQA-----------------RVRIIEGIA  260 (318)
Q Consensus       222 ~~lv~e~~~~g~L~~~l-----------------~-------~~~~~~~l~~~~-----------------~~~i~~~i~  260 (318)
                      .+-+++|++|..+....                 +       .......+.|..                 ...++.++.
T Consensus       108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~  187 (1013)
T PRK06148        108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL  187 (1013)
T ss_pred             EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence            57789999998775410                 0       000112233321                 111222222


Q ss_pred             HHHH-----HHHhcCCCCeeecCCCCCCEEEcCCC--Cce-Eeecccce
Q 021046          261 QGLL-----YLHQYSRLRIIHRDLKASNILLDSDM--NPK-ISDFGMAR  301 (318)
Q Consensus       261 ~~l~-----yLH~~~~~~ivH~Dlk~~Nill~~~~--~~k-i~DfGla~  301 (318)
                      ....     .+. .-+..+||+|+.+.|||++.+.  .+. |+|||-+.
T Consensus       188 ~~~~~~v~p~l~-~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        188 ARFERNVAPRLA-ALPAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             HHHHHHHHHHHh-cCCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            2221     121 1234599999999999999875  454 99999764


No 494
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=96.34  E-value=0.015  Score=52.54  Aligned_cols=62  Identities=18%  Similarity=0.213  Sum_probs=41.2

Q ss_pred             eeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcC
Q 021046          221 ENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDS  288 (318)
Q Consensus       221 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~  288 (318)
                      +..|+=+|+.+-++..++..    ...+++....++.-.++|+.-+---.  .++|.|+.|.||++.-
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~----~~~pe~l~kkva~lg~~AllkMl~vD--NFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKW----KSQPEALVKKVAKLGVNALLKMLIVD--NFVHADLHPGNVLIRF  380 (565)
T ss_pred             cceeeeeccccccHHhhhhc----ccChHHHHHHHHHHHHHHHHHHHHhh--cceecccCCCcEEEEe
Confidence            34577788888888888732    23344556666666666654333222  3999999999999943


No 495
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.29  E-value=0.049  Score=48.20  Aligned_cols=32  Identities=25%  Similarity=0.349  Sum_probs=28.3

Q ss_pred             CCCeeecCCCCCCEEEcCCCCceEeeccccee
Q 021046          271 RLRIIHRDLKASNILLDSDMNPKISDFGMARI  302 (318)
Q Consensus       271 ~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~  302 (318)
                      +..++|+|+.+.|++++.++.+.++||-.+..
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            34699999999999999999999999998763


No 496
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.19  E-value=0.027  Score=51.17  Aligned_cols=74  Identities=12%  Similarity=0.162  Sum_probs=49.2

Q ss_pred             ccccccCCcccEEEEEecC-CcEEEEEEccC-----CC-CcCHHHHHHHHHHHhccC--CC-ccceEEEEEEecCeeEEE
Q 021046          156 QCKLGEGGFGPVYKGRLLN-GQEVAVKRLSN-----QS-GQGLTEFKNEMMLIAKLQ--HR-HLVRLFGCCIEQGENILI  225 (318)
Q Consensus       156 ~~~lg~G~fg~Vy~~~~~~-~~~vavK~l~~-----~~-~~~~~~~~~e~~~l~~l~--h~-niv~l~~~~~~~~~~~lv  225 (318)
                      .+.||-|.-.-||++...+ ++.|.||.-..     .+ +-..++..-|...|....  -| .+++++.  .+.....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHH
Confidence            4578999999999998753 56799984321     11 334566777877777653  24 4555553  344566789


Q ss_pred             EEeccC
Q 021046          226 YEYMPN  231 (318)
Q Consensus       226 ~e~~~~  231 (318)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            999864


No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.14  E-value=0.24  Score=44.17  Aligned_cols=72  Identities=15%  Similarity=0.105  Sum_probs=45.3

Q ss_pred             CCcccEEEEEecCCcEEEEEEccCCCCcCHHHHHHHHHHHhccCCC--ccceEE---E--EEEecCeeEEEEEeccCCCh
Q 021046          162 GGFGPVYKGRLLNGQEVAVKRLSNQSGQGLTEFKNEMMLIAKLQHR--HLVRLF---G--CCIEQGENILIYEYMPNKSL  234 (318)
Q Consensus       162 G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~---~--~~~~~~~~~lv~e~~~~g~L  234 (318)
                      +.-..||+....++..+++|..+.. .....+...|+..+..|...  .++...   |  ....++..+.++++++|...
T Consensus        36 s~eN~vy~v~~~~~~~~vlKv~r~~-~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~  114 (325)
T PRK11768         36 SYENRVYQFGDEDGRRVVAKFYRPE-RWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAP  114 (325)
T ss_pred             cccceEEEEecCCCCEEEEEEcCcc-cCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCC
Confidence            3446799998877888999987532 23455677788777666321  122211   2  22335667889999987654


No 498
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.95  E-value=0.031  Score=49.88  Aligned_cols=56  Identities=23%  Similarity=0.250  Sum_probs=46.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeecccceeec
Q 021046          246 LLGWQARVRIIEGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGMARIFG  304 (318)
Q Consensus       246 ~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGla~~~~  304 (318)
                      .-.|++...++.+-+.-+.-+...  .++=|||+.-.||||+ +|++-|+||-++|+-.
T Consensus       317 ~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfklsRl~~  372 (488)
T COG5072         317 ADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKLSRLSY  372 (488)
T ss_pred             cccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeeeeeccc
Confidence            456788888888877777766653  4799999999999999 9999999999999543


No 499
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.31  E-value=0.06  Score=44.82  Aligned_cols=101  Identities=17%  Similarity=0.126  Sum_probs=65.1

Q ss_pred             EEEEEccCCCCc-CHHHHHHHHHHHhccCCCccceEEEEEEecCeeEEEEEeccCCChhhhhhcCCCCCCCCHHHHHHHH
Q 021046          178 VAVKRLSNQSGQ-GLTEFKNEMMLIAKLQHRHLVRLFGCCIEQGENILIYEYMPNKSLDVFLFYPKKKRLLGWQARVRII  256 (318)
Q Consensus       178 vavK~l~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~  256 (318)
                      ..+|+++...-. ...-|..+.+++++++  .|++|..-  ..-..-++.|+|-.-..            ..    ..++
T Consensus        88 L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------------~~----~N~i  147 (308)
T PF07387_consen   88 LFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------------NF----SNFI  147 (308)
T ss_pred             hhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------------ch----hHHH
Confidence            455666554333 4456788888888875  46666521  22244578888743211            00    1122


Q ss_pred             HHHHHHHHHHHhcCCCCeeecCCCCCCEEEcCCCCceEeeccc
Q 021046          257 EGIAQGLLYLHQYSRLRIIHRDLKASNILLDSDMNPKISDFGM  299 (318)
Q Consensus       257 ~~i~~~l~yLH~~~~~~ivH~Dlk~~Nill~~~~~~ki~DfGl  299 (318)
                      ..=..+|.-.|+.. .+.+|+|-.|+||+-|+.|-+||.|-+-
T Consensus       148 ~agi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  148 TAGIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHhHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhh
Confidence            22246777888643 4699999999999999999999999873


No 500
>PTZ00384 choline kinase; Provisional
Probab=95.21  E-value=0.25  Score=45.13  Aligned_cols=74  Identities=18%  Similarity=0.293  Sum_probs=45.6

Q ss_pred             cccccCCcccEEEEEecCCc-------EEEEEEccCCCCcCHHHHHHHHHHHhccCCCccc-eEEEEEEecCeeEEEEEe
Q 021046          157 CKLGEGGFGPVYKGRLLNGQ-------EVAVKRLSNQSGQGLTEFKNEMMLIAKLQHRHLV-RLFGCCIEQGENILIYEY  228 (318)
Q Consensus       157 ~~lg~G~fg~Vy~~~~~~~~-------~vavK~l~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~  228 (318)
                      +.|..|-...+|++...++.       .|.++......... -+-.+|+.++..+...++. ++++.+.    .++++||
T Consensus        56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~-IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~ef  130 (383)
T PTZ00384         56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLV-IDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQEW  130 (383)
T ss_pred             EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceE-eccHHHHHHHHHHHhCCCCCeEEEecC----CEEEEEE
Confidence            45656778889998764431       24444332221111 2336788899888765554 4555553    2699999


Q ss_pred             ccCCChh
Q 021046          229 MPNKSLD  235 (318)
Q Consensus       229 ~~~g~L~  235 (318)
                      ++|.+|.
T Consensus       131 IeGr~l~  137 (383)
T PTZ00384        131 VEGNTMG  137 (383)
T ss_pred             eccccCC
Confidence            9998774


Done!