BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021047
(318 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 192/313 (61%), Gaps = 25/313 (7%)
Query: 1 MEFDLENPFTSFEEHQS---DTLLD-----LFATESDHMPSHNFVQCLKITDFYVSLRQE 52
MEF LE+P + H + DT + LF E HMPS ++ LK + F +S R +
Sbjct: 1 MEFHLEHPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQ 60
Query: 53 TVSLILQIQFACNFE-PFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKN 111
+S I Q++ F+ P ++YLAV YLDRF+S +++PQ KPW+L+L+++SC+SL+AKM+
Sbjct: 61 AISSI--TQYSRKFDDPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRK 118
Query: 112 THFPLSKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPK--DPP 169
+S + + FDAQ I RME +IL AL WRMRS+TPFSFL FFISLFE K DP
Sbjct: 119 PDMSVSDLPVEGEF-FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPL 177
Query: 170 L-TQALKDRATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDY 228
L +LK + +D+ F +I LEF+PSVIA +A+L +S+EL PLQFP F I Y
Sbjct: 178 LLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTY 237
Query: 229 VNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQFSVVDYKCTKSESQQITNSSIT-TT 287
VNK++L +CY +QE + G + S+ T +V+D + + ES + SIT T
Sbjct: 238 VNKDELMECYKAIQERDIIVG-----ENEGSTETAVNVLDQQFSSCESDK----SITITA 288
Query: 288 TMMPEKREIKRRK 300
+ P++R+ R+
Sbjct: 289 SSSPKRRKTSTRR 301
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 167/308 (54%), Gaps = 25/308 (8%)
Query: 2 EFDLENPFTSFEEHQSDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQ 61
EFDLENPFTS + +LLD E H PS ++ + R+E I +++
Sbjct: 19 EFDLENPFTSPADEPIASLLD---AEGHHSPS--------VSAAASAARREAAGFISKVR 67
Query: 62 FACNFE--PFISYLAVTYLDRFISRQEIP-QGKPWVLRLLAVSCISLAAKM-KNTHFPLS 117
+ + P ++YLA+ Y+DR++S++++ + PW RLLA+SC++LAAKM + +
Sbjct: 68 YDGELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAA 127
Query: 118 KFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLF--EPKDPPLTQALK 175
Q ++ +FD I RME ++L+AL WR RS+TP +FL FF+S +P+ P L A+K
Sbjct: 128 DIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIK 187
Query: 176 DRATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLS 235
RA D++ R E+K+ EF PSV AA+A+L ++ E+ F+ + + +VN E L
Sbjct: 188 ARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLR 247
Query: 236 KCYDTVQEMVEMDGCESILDTLSSSRTQFSVVD-YKCTKSESQQITNSSITTTTMMPEKR 294
+C + + + S +S+ T +V+ ++ SES++ TT
Sbjct: 248 ECGEVMAAACGVG--PSWAAAATSAETPVTVLGHHRSASSESER-----TTTVGSAANSA 300
Query: 295 EIKRRKMN 302
+ KRR M
Sbjct: 301 DAKRRCMG 308
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 142/235 (60%), Gaps = 15/235 (6%)
Query: 13 EEHQSDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISY 72
E + + ++ +L E+++ P ++ L+ + R E+VS IL++Q F P +Y
Sbjct: 45 ELYSAASIAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAY 104
Query: 73 LAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGD-QKLIFDAQ 130
LAV Y+DRF+S + +P+G+ W ++LLAV+C+SLAAKM+ T P L Q + + +F+ +
Sbjct: 105 LAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPR 164
Query: 131 TIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIK 190
TI RME LIL ALNWR+RS+TPF+F+ FF A K + ++ A+S+I+
Sbjct: 165 TICRMEFLILTALNWRLRSVTPFTFIDFF-------------ACKHISNAMVQNANSDIQ 211
Query: 191 LLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMV 245
L+ PS +AA+AVL ++ E L F + + ++ + +E +S CY +Q++V
Sbjct: 212 FLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQQLV 266
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 144/246 (58%), Gaps = 9/246 (3%)
Query: 8 PFTSFEEHQSD-TLLDLFATESDHMPSHNFVQCLKITDFYVSL-RQETVSLILQIQFACN 65
P F + +S+ ++++ E H+PS ++++ L+ D +++ R++ ++ I +
Sbjct: 34 PQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQ 93
Query: 66 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ-GDQ 123
F P LA+ YLDRF+S ++P GK W+L+LLAV+C+SLAAK++ T P L Q GD
Sbjct: 94 FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP 153
Query: 124 KLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIF 183
+ +F+A+++ RMELL+L+ L WR+R+ITP S++ +F+ D + L R+ +I
Sbjct: 154 QFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIA 213
Query: 184 RAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQE 243
I LEFRPS +AA+ L S EL + F + S L S + KE + K + E
Sbjct: 214 STTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFS-LLQKERVKK----IGE 268
Query: 244 MVEMDG 249
M+E DG
Sbjct: 269 MIESDG 274
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 26/302 (8%)
Query: 17 SDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVT 76
D++ E +P H+++ + S R+++V+ IL++Q NF+P +YLAV
Sbjct: 49 GDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVN 108
Query: 77 YLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ-GDQKLIFDAQTIHR 134
Y+DRF+ + +P+ W ++LLAV+C+SLAAKM+ P L FQ K +F+A+TI R
Sbjct: 109 YMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKR 168
Query: 135 MELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEF 194
MELL+L L+WR+RS+TPF F+ FF +P L + AT+II E LE+
Sbjct: 169 MELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFIS-HATEIILSNIKEASFLEY 227
Query: 195 RPSVIAASAVLLSSYELFPLQFPSFKTSI-------LSSDYVNKEDLSKCYDTVQEMVEM 247
PS IAA+A+L + EL PS + + D ++KE + +CY ++ M
Sbjct: 228 WPSSIAAAAILCVANEL-----PSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAM--- 279
Query: 248 DGCESILDTLSSSRTQFSVVDYKCTKSESQQITNSSITTTTMMPEKREIKRRKMNGFCSE 307
+ ++R V K S T + + + KRRK++G+
Sbjct: 280 --------AIENNRLNTPKVIAKLRVSVRASSTLTRPSDESSFSSSSPCKRRKLSGYSWV 331
Query: 308 GE 309
G+
Sbjct: 332 GD 333
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 132/228 (57%), Gaps = 18/228 (7%)
Query: 23 LFATESDHMPSHNFVQCLKIT----DFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L TE+DHMP ++ + L+ D + +R + + I ++ +F P + LAV YL
Sbjct: 72 LVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTACLAVNYL 131
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLS-KFQ-GDQKLIFDAQTIHRME 136
DRF+S ++P GK W+ +LLAV+C+SLAAKM+ T P S Q G+++ +F+A+TI RME
Sbjct: 132 DRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRME 191
Query: 137 LLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRP 196
LL+L L WRM+++TPFS++ +F+ DPP ++ ++++I + L FRP
Sbjct: 192 LLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSAL-LSSELILCIARGTECLGFRP 250
Query: 197 SVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEM 244
S IAA+ E + +F +VNKE +S C + +Q M
Sbjct: 251 SEIAAAVAAAVVGE----EHAAFS-------HVNKERMSHCQEVIQAM 287
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 136/243 (55%), Gaps = 22/243 (9%)
Query: 12 FEEHQSDTLLDLFATESDHMPSHNFVQCLKIT--DFYVSLRQETVSLILQIQFACNFEPF 69
F + + L E HMP ++ + L+ D + +R E + I ++ NF
Sbjct: 70 FPRQSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSV 129
Query: 70 ISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIF 127
+YLAV YLDRF+S+ E+P+G+ W+ +LL+V+C+S+AAKM+ T P L G+ + +F
Sbjct: 130 TAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLF 189
Query: 128 DAQTIHRMELLILDALNWRMRSITPFSFLCFFI-SLFEPKDPPLTQALKDRATDIIFRAH 186
+ +TIHRMELL+L LNWRM+++TPFS++ +F+ L P + L R++++I R
Sbjct: 190 EVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLL--RSSELILRIA 247
Query: 187 SEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSD------YVNKEDLSKCYDT 240
+ LEFRPS IAA+ + E T ++ D +V+K + +C +
Sbjct: 248 AGTGFLEFRPSEIAAAVAATVAGE---------ATGVVEEDIAEAFTHVDKGRVLQCQEA 298
Query: 241 VQE 243
+Q+
Sbjct: 299 IQD 301
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 19/292 (6%)
Query: 23 LFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFI 82
L E DH P +++ L++ S R++ + I ++ NF P YLAV YLDRF+
Sbjct: 68 LVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFL 127
Query: 83 SRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLS-KFQG-DQKLIFDAQTIHRMELLIL 140
S +P + W+ +LL+VSC+SLA KM+ T PL Q D + +F+A+ I RMEL+++
Sbjct: 128 SSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRMELIVM 187
Query: 141 DALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPSVIA 200
L WR++++TPFSF+ +F+ F PP + L +D+ + + L FRPS IA
Sbjct: 188 KTLKWRLQAVTPFSFIGYFLDKFNEGKPP-SYTLASWCSDLTVGTLKDSRFLSFRPSEIA 246
Query: 201 ASAVLLSSYELFPLQFPSFKTSILSSDY-VNKEDLSKCYDTVQEMVEMDGCESILDTLSS 259
A+ VL E QF F +++ S+ VNKE + +CY+ MVE + I ++ +S
Sbjct: 247 AAVVLAVLAE---NQFLVFNSALGESEIPVNKEMVMRCYEL---MVEKALVKKIRNSNAS 300
Query: 260 S---RTQFSVVDYKCTKSESQQIT------NSSITTTTMMPEKREIKRRKMN 302
S + +V+D C S T NS+ KRR++N
Sbjct: 301 SSVPHSPITVLDAACFSFRSDDTTLGSSQSNSNNKDYNSQDSAPASKRRRLN 352
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 22 DLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRF 81
++ E H P ++++ L+ D ++R + + I + F P LA+ YLDRF
Sbjct: 41 EMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMNYLDRF 100
Query: 82 ISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ-GDQKLIFDAQTIHRMELLI 139
+S ++P GK W ++LLAV+C+SLAAK++ T+ P L + Q G +F+A+++ RMELL+
Sbjct: 101 LSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQRMELLV 160
Query: 140 LDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPSVI 199
L+ L WR+R++TP S++ +F+S D L R+ +I I LEFR S I
Sbjct: 161 LNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRASEI 220
Query: 200 AASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMDGCESILDTLSS 259
AA+ L S E F S S L + V K + EM+E DG S T ++
Sbjct: 221 AAAVALSVSGEHFDKFSFSSSFSSLEKERVKK---------IGEMIERDGSSSSSQTPNN 271
Query: 260 SRTQFSVVDY 269
+ QF Y
Sbjct: 272 TVLQFKSRRY 281
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 138/236 (58%), Gaps = 12/236 (5%)
Query: 18 DTLLDLFATESD--HMPSHNFVQCLKITD-FYVSLRQETVSLILQIQFACNFEPFISYLA 74
D + +L E++ H P ++ L+ ++ R ++V+ IL+++ P +YLA
Sbjct: 81 DVVAELIGGEAERSHSPRADYPGRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLA 140
Query: 75 VTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTI 132
V+Y+DRF+S +P G W ++LLAV+C+SLAAKM+ T P L D + IF+ +TI
Sbjct: 141 VSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTI 199
Query: 133 HRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLL 192
RMELL+LDAL+WR+RSITPF+F+ F +P + + L +AT + + + L
Sbjct: 200 FRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRE-LIHQATQVTLATIHDTEFL 258
Query: 193 EFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYV---NKEDLSKCYDTVQEMV 245
+ PS IAA+AVL +S E+ +Q S L S + ++E + +CY +Q+++
Sbjct: 259 DHCPSSIAAAAVLCASSEI--MQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQQLI 312
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 136/243 (55%), Gaps = 14/243 (5%)
Query: 8 PFTSFEEH---QSDTLLDLFATESDHMPSHNFVQCLKITDFYVSL-RQETVSLILQIQFA 63
PF ++ + + L+ LF+ E + S CL D Y+S R+E V IL++
Sbjct: 48 PFVVLQQDLFWEDEDLVTLFSKEEEQGLS-----CLD--DVYLSTDRKEAVGWILRVNAH 100
Query: 64 CNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGD 122
F + LA+TYLD+FI + + KPW+L+L++V+C+SLAAK++ T P L FQ +
Sbjct: 101 YGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVE 160
Query: 123 Q-KLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDI 181
+ K +F+A+TI RMELLIL L W+M ITP SF+ I K+ L ++ +
Sbjct: 161 ETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFL-NKCHRL 219
Query: 182 IFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTV 241
+ S+ + + + PSV+AA+ ++ ++ P S++T++L + KE + CYD +
Sbjct: 220 LLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLI 279
Query: 242 QEM 244
++
Sbjct: 280 LQL 282
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 8/204 (3%)
Query: 47 VSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQE--IPQGKPWVLRLLAVSCIS 104
+S R + I ++Q +F P +YLAV YLDRF+S E + PW+ +LL V+C+S
Sbjct: 101 LSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLS 160
Query: 105 LAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISL 162
LAAKM+ T P L + + +FDA+TIHRME+++L L WRM+++TPF+++ F+
Sbjct: 161 LAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDK 220
Query: 163 FEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTS 222
+ +T L R T+II L FRPS IA + L S + F
Sbjct: 221 INEGN-RITSELISRCTEIILSTMKATVFLRFRPSEIATAVAL--SVVADGGRVLDFGGV 277
Query: 223 ILSSDY-VNKEDLSKCYDTVQEMV 245
+ SS V+K+++ +C+ +QEM
Sbjct: 278 LESSKLPVDKDNVGRCHQAMQEMA 301
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 132/240 (55%), Gaps = 13/240 (5%)
Query: 16 QSDTLLD--LFATESDHMPSHNFVQCLKIT----DFYVSLRQETVSLILQIQFACNFEPF 69
QSD ++ L E H+P ++Q L + D V++R + + I ++ F P
Sbjct: 51 QSDDCIEALLGREEQQHIPMEGYLQRLLLQPDGLDL-VAVRSDAIDWIWKVHELYKFGPL 109
Query: 70 ISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIF 127
+ L+V YLDRF+S ++PQ + + +LLAV+ +SLAAKM+ T P L D K +F
Sbjct: 110 TAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVF 169
Query: 128 DAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHS 187
+ +TI RMEL +L+AL WRM+++T SF+ +++ F D P T AL R+ D+I
Sbjct: 170 ETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALS-RSVDLILSTCK 228
Query: 188 EIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEM 247
+ L FRPS IAAS L++ E F T + + KE + +CY+ +Q+ + M
Sbjct: 229 VAEFLVFRPSEIAASVALVALEEHETSMFERVATCYKN---LKKERVLRCYEMIQDKIIM 285
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 109/182 (59%), Gaps = 5/182 (2%)
Query: 18 DTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTY 77
D + ++ E + P ++V+ L D +S+R + + IL++ +F L++ Y
Sbjct: 65 DRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNY 124
Query: 78 LDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ-GDQKLIFDAQTIHRM 135
LDRF++ E+P+ K W +LLAVSC+SLA+KM+ T P + Q D K +F+A+TI RM
Sbjct: 125 LDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRM 184
Query: 136 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFR 195
ELL++ LNWR++++TPFSF+ +F+ +++ L R++ I I+ L+FR
Sbjct: 185 ELLVVTTLNWRLQALTPFSFIDYFVDKISGH---VSENLIYRSSRFILNTTKAIEFLDFR 241
Query: 196 PS 197
PS
Sbjct: 242 PS 243
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 138/263 (52%), Gaps = 22/263 (8%)
Query: 18 DTLLDLFATESDHMPSHNFVQCLKITD-FYVSLRQETVSLILQIQFACNFEPFISYLAVT 76
D +L L + E++ P +I D F VS R+E + +L+++ F + LAV
Sbjct: 67 DEILSLISKENETNPCFG----EQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVN 122
Query: 77 YLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQ-KLIFDAQTIHR 134
Y DRF++ ++ KPW+ +L+AV+ +SLAAK++ P L Q ++ + +F+A+TI R
Sbjct: 123 YFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQR 182
Query: 135 MELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALK--DRATDIIFRAHSEIKLL 192
MELLIL L WRM +TP SF I F K Q L + ++ ++ + +
Sbjct: 183 MELLILSTLQWRMHPVTPISFFDHIIRRFGSK---WHQQLDFCRKCERLLISVIADTRFM 239
Query: 193 EFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQE--------- 243
+ PSV+A + ++L EL P +++ I + VN+E +++CY+ + E
Sbjct: 240 RYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNPSKKRMM 299
Query: 244 -MVEMDGCESILDTLSSSRTQFS 265
+V+ D +LD SS + ++
Sbjct: 300 NLVDQDSPSGVLDFDDSSNSSWN 322
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 100/161 (62%), Gaps = 4/161 (2%)
Query: 52 ETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKN 111
E+VS IL+++ F+P +YLAV+Y+DRF+S + +P W +LL V+C+SLAAKM+
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPD-HGWASQLLCVACLSLAAKMEE 185
Query: 112 THFP-LSKFQGDQ-KLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPP 169
+ P L Q + + IF+ +TI RMEL++L L+WR+RS+TPF+F+ FF
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS 245
Query: 170 LTQALKDRATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYE 210
++ L RA II A E++ L S +AA+AVL + E
Sbjct: 246 -SRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNE 285
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 44 DFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCI 103
+F V R++ + I +++ F + LAV Y DRFI+ ++ KPW+ +L A++C+
Sbjct: 80 EFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACL 139
Query: 104 SLAAKMKNTHFP-LSKFQGDQ-KLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFIS 161
SLAAK++ P L FQ ++ + +F+A+TI RMELL+L L+WRM +TP SF I
Sbjct: 140 SLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIR 199
Query: 162 LFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKT 221
+ K + L R ++ + + L F PSV+A + ++ +L +++
Sbjct: 200 RYSFKSHHQLEFLS-RCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQS 258
Query: 222 SILSSDYVNKEDLSKCYDTV 241
+++ V+ E ++KCY+ V
Sbjct: 259 QLMTLLKVDSEKVNKCYELV 278
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 26/213 (12%)
Query: 44 DFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQG-KPWVLRLLAVSC 102
D++ R+ TV IL+ + F +YLA+ Y DRF R+ I + PW RLLAV+C
Sbjct: 103 DWFALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVAC 162
Query: 103 ISLAAKMKNTHFP-LSKFQ---GDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCF 158
+SLAAKM+ P LS+F+ GD F I RMELL+L L+WRM ++TPF +L
Sbjct: 163 VSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYL-- 220
Query: 159 FISLFEPKDPPLTQALKDRA---------TDIIFRAHSEIKLLEFRPSVIAASAVLLSSY 209
P L+ L+ +IF A +L+ RPS +AA+AVL +++
Sbjct: 221 ---------PCLSSRLRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATH 271
Query: 210 ELFPLQFPSFKTSILSSDY-VNKEDLSKCYDTV 241
+ K S LS + ++KED+ CY +
Sbjct: 272 GALTREALESKMSGLSPSFLLDKEDVFACYSAM 304
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 139/256 (54%), Gaps = 18/256 (7%)
Query: 50 RQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKM 109
R V I++ F +Y+AVTYLDRF++R+ + + K W L+LL+V+C+SLAAK+
Sbjct: 100 RAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKV 159
Query: 110 KNTHFP-LSKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDP 168
+ P L +F+ D ++D ++ RMELL+L L W+M + TPFS+L F + F +
Sbjct: 160 EERRPPRLPEFKLD---MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDE- 215
Query: 169 PLTQALKDRATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDY 228
+A+ RA + IF + I + ++PS IA +A+L++ + K S++ S +
Sbjct: 216 --RKAIVLRAIECIFASIKVISSVGYQPSTIALAAILIARNKETAPNLDELK-SVVGSLW 272
Query: 229 --VNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQFSVVDYKCTKSESQQITNSSITT 286
++ + CY+ + M++ D S+ T + + SV ++ + N++ TT
Sbjct: 273 QQLDTGHVYSCYNKM--MIQED--RSMQSTTEVASSGVSVAHIGGSEDSAMGGANNA-TT 327
Query: 287 TTMMPEKREIKRRKMN 302
P+K KR++++
Sbjct: 328 LEATPDK---KRKRLH 340
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 45 FYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIP-QGKPWVLRLLAVSCI 103
++ R V IL+ + F +YLA+ Y DRF R+ + + PW RLL+++C+
Sbjct: 95 WFRQARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACV 154
Query: 104 SLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFL-CFFIS 161
S+AAKM+ P LS+F +F + +I RMELL+L L WRM ++TPF FL CF
Sbjct: 155 SVAAKMEEYQSPALSEFDAGGGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSR 214
Query: 162 LFEPKDPPLTQALKD---------RATDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELF 212
L A A IF +L++RPS +AA+A+L +SY
Sbjct: 215 LHRHHHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILAASYGA- 273
Query: 213 PLQFPSF--KTSILS-SDYVNKEDLSKCY 238
PL + K S LS S ++KE++ CY
Sbjct: 274 PLTKEALESKMSNLSPSCLIDKENVHACY 302
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Query: 54 VSLILQIQFACNFEPFISYLAVTYLDRFISRQEIP--QGKPWVLRLLAVSCISLAAKMKN 111
+ IL + F+ +Y+A++Y D F+ ++ I + + W +RLL+V+C+SLAAKM+
Sbjct: 76 IDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEE 135
Query: 112 THFP-LSKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPL 170
P LS++ D +F I + ELLIL L+W+M ITPF + +F++ + +
Sbjct: 136 RIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSV 195
Query: 171 TQALK-DRATDIIFRAHSEIKLLEFRPSVIAA 201
++ L R++D + EI E+R V+AA
Sbjct: 196 SKDLVLLRSSDSLLALTKEISFTEYRQFVVAA 227
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 65 NFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQ 123
E ++ A YLDRF+S + + W++ +++V C+SLA K+ P L Q ++
Sbjct: 100 GLEAATAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEE 159
Query: 124 KLI--FDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDI 181
+ F A TI MEL +L AL WR+ +TPFSFL P T RA +
Sbjct: 160 AMGHSFRASTIRDMELTLLKALRWRLACVTPFSFL-----------PVTTTTTTTRA--L 206
Query: 182 IFRAHSEIKLLEFRPSVIAASAVLLSS 208
+ R+ + L F S++AASA+ LSS
Sbjct: 207 LLRSLLDPSFLRFDASLLAASALTLSS 233
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 23 LFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFI 82
+ E +++PS N+ +C++ + +R+ + +L++ E + LA+ YLDRF+
Sbjct: 31 MLKAEENYLPSPNYFKCVQ-KEIVPKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFL 89
Query: 83 SRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIH-----RMEL 137
S + K L+LL +C+ LA+KMK T PL+ ++ I+ ++ +MEL
Sbjct: 90 S---VEPTKKTRLQLLGATCMFLASKMKET-VPLT---AEKLCIYTDNSVRPGELLQMEL 142
Query: 138 LILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPS 197
L L+ L W + S+TP F+ F++ P Q L+ A + +++ + PS
Sbjct: 143 LALNKLKWDLASVTPHDFIEHFLAKL-PIHQSSKQILRKHAQTFVALCATDVNFIASPPS 201
Query: 198 VIAASAVLLSSYELF 212
+IAA +V + L+
Sbjct: 202 MIAAGSVAAAVQGLY 216
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 24/262 (9%)
Query: 17 SDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVT 76
SD + L E+ PS +F++ L+ D S+R + ++++ P YL V
Sbjct: 225 SDIYMHLREAETRKHPSTDFMETLQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVN 283
Query: 77 YLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRM 135
Y+DR++S EI + + L+LL V+C+ +AAK K P + +F + + M
Sbjct: 284 YIDRYLSGNEINRQR---LQLLGVACMLIAAKYKEICAPQVEEFCYITDNTYFRDEVLEM 340
Query: 136 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAH--SEIKLLE 193
E +L+ L + M + T FL F+ + + D +D A + F A+ +E+ LLE
Sbjct: 341 EASVLNYLKFEMTAPTAKCFLRRFVRVAQVSD-------EDPALHLEFLANYVAELSLLE 393
Query: 194 FR-----PSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMD 248
+ PS++AASA+ L+ + L P + P T + Y + E LS C + +
Sbjct: 394 YNLLSYPPSLVAASAIFLAKFILQPAKHPWNSTLAHYTQYKSSE-LSDCVKALHRLF--- 449
Query: 249 GCESILDTLSSSRTQFSVVDYK 270
C L + R +++ YK
Sbjct: 450 -CVGPGSNLPAIREKYTQHKYK 470
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 23 LFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFI 82
+ E PS ++ +C++ + ++R+ + +L++ E + LA+ YLDRF+
Sbjct: 29 MLKAEETSCPSMSYFKCVQ-KEILPNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFL 87
Query: 83 SRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHR-----MEL 137
S + P K W L+LL +C+ LA+KMK T PL+ ++ I+ +I MEL
Sbjct: 88 SVE--PLRKSW-LQLLGATCMFLASKMKET-IPLT---AEKLCIYTDNSIRPDELLIMEL 140
Query: 138 LILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPS 197
+L+ L W + S+TP F+ F++ P Q ++ A + +++ + PS
Sbjct: 141 RVLNKLKWDLASVTPHDFIEHFLNKM-PLTEDTKQIIRKHAQTFVALCATDVNFISNPPS 199
Query: 198 VIAASAV 204
+IAA +V
Sbjct: 200 MIAAGSV 206
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 47 VSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQG-KPWVLRLLAVSCISL 105
VS R+ V L+ F + LAV YLDR + G +PW+ RL AV+C++L
Sbjct: 75 VSAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVAL 134
Query: 106 AAKMKNTHFPL---------SKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFL 156
AAK++ T P+ + ++ +F+ +T+ RMELL+L AL WRM +TP S+L
Sbjct: 135 AAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYL 194
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 21/255 (8%)
Query: 17 SDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVT 76
SD + L E+ PS +F++ ++ D S+R + ++++ P YL V
Sbjct: 212 SDIYMHLREAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVN 270
Query: 77 YLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRM 135
Y+DR++S EI + + L+LL V+C+ +AAK + P + +F + + M
Sbjct: 271 YIDRYLSGNEINRQR---LQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEM 327
Query: 136 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAH--SEIKLLE 193
E +L+ L + + + T FL F+ + + D +D A + F A+ +E+ LLE
Sbjct: 328 EASVLNYLKFEVTAPTAKCFLRRFVRVAQVSD-------EDPALHLEFLANYVAELSLLE 380
Query: 194 FR-----PSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMD 248
+ PS++AASA+ L+ + L P + P T + Y + E LS C + + +
Sbjct: 381 YNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSE-LSDCVKALHRLFSV- 438
Query: 249 GCESILDTLSSSRTQ 263
G S L + TQ
Sbjct: 439 GPGSNLPAIREKYTQ 453
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 21/255 (8%)
Query: 17 SDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVT 76
SD + L E+ PS +F++ ++ D S+R + ++++ P YL V
Sbjct: 242 SDIYMHLREAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVN 300
Query: 77 YLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRM 135
Y+DR++S EI + + L+LL V+C+ +AAK + P + +F + + M
Sbjct: 301 YIDRYLSGNEINRQR---LQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEM 357
Query: 136 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAH--SEIKLLE 193
E +L+ L + + + T FL F+ + + D +D A + F A+ +E+ LLE
Sbjct: 358 EASVLNYLKFEVTAPTAKCFLRRFVRVAQVSD-------EDPALHLEFLANYVAELSLLE 410
Query: 194 FR-----PSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEMD 248
+ PS++AASA+ L+ + L P + P T + Y + E LS C + + +
Sbjct: 411 YNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSE-LSDCVKALHRLFSV- 468
Query: 249 GCESILDTLSSSRTQ 263
G S L + TQ
Sbjct: 469 GPGSNLPAIREKYTQ 483
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 23 LFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFI 82
+ E PS ++ +C++ + +R+ + +L++ E + LA+ YLDRF+
Sbjct: 31 MLKAEETCSPSVSYFKCVQ-KEILPYMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFL 89
Query: 83 SRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIH-----RMEL 137
S + + + + L+LL +C+ +A+KMK T PL+ ++ I+ +I +MEL
Sbjct: 90 SFEPLKKSR---LQLLGATCMFVASKMKET-IPLT---AEKLCIYTDNSIRPDELLQMEL 142
Query: 138 LILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPS 197
L+++ L W + ++TP F+ F++ P Q ++ A + +++K + PS
Sbjct: 143 LLVNKLKWNLAAMTPHDFIEHFLTKM-PLAEDTKQIIRKHAQTFVALCATDVKFISNPPS 201
Query: 198 VIAASAVL 205
+IAA +V+
Sbjct: 202 MIAAGSVV 209
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 23/236 (9%)
Query: 14 EHQSDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYL 73
E+ D L +E+ + P N+++ K TD S+R + ++++ P YL
Sbjct: 164 EYAQDIHNYLKKSEAKYRPKSNYMR--KQTDINSSMRAILIDWLVEVSEEYKLIPQTLYL 221
Query: 74 AVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTI 132
+V+Y+DRF+S + +GK L+L+ +C+ +AAK + + P +++F + A+ +
Sbjct: 222 SVSYIDRFLSHMSVLRGK---LQLVGAACMLVAAKFEEIYPPEVAEFVYITDDTYTAKQV 278
Query: 133 HRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLL 192
RME LIL L + + T FL + LF P +Q LK A + SE+ L+
Sbjct: 279 LRMEHLILKTLAFDLSVPTCRDFLSRY--LFAANAKPESQ-LKYLAEYL-----SELTLI 330
Query: 193 ------EFRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQ 242
++ PS+IAAS++ ++++ L + P T S Y N +DL C + +
Sbjct: 331 NCDISVKYAPSMIAASSICVANHMLNSI--PWTPTLEFYSGY-NIQDLRSCLNEIH 383
>sp|Q10Q62|CCF32_ORYSJ Putative cyclin-F3-2 OS=Oryza sativa subsp. japonica GN=CYCF3-2
PE=3 SV=1
Length = 406
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 20/250 (8%)
Query: 4 DLENPFTSFEEHQSDTLLDLF---ATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQI 60
D++ S E + LD E P N+ Q +I ++++R + V+ + ++
Sbjct: 122 DIDRYLRSLEGREMAKCLDAVQFCTAEESRRPIVNYDQ--EIQGGHINMRGKLVNWMEEL 179
Query: 61 QFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSK-F 119
+ N I YLAV+Y+DRF+SR + + + L+LL S + +A+K ++ P ++ F
Sbjct: 180 VYGFNLWDNILYLAVSYVDRFLSRNVVNRER---LQLLGTSALFVASKYEDRCHPSARFF 236
Query: 120 QGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRAT 179
+ Q + ME IL LN++M S T +FL F+ + P+ L
Sbjct: 237 SSITADTYTTQQVVAMEANILSFLNFQMGSPTVITFLRRFLFSCRGSNRPINIRL----- 291
Query: 180 DIIFRAHSEIKLLE-----FRPSVIAASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDL 234
+++ +E+ LL+ F PS++AA+ + + + L P P + S+ D+
Sbjct: 292 ELMCIYLAELSLLDDYNIRFLPSIVAAACLFVGKFTLNPNTRP-WNLSVQRITGYKVSDI 350
Query: 235 SKCYDTVQEM 244
C ++ ++
Sbjct: 351 EDCIRSIHDL 360
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 41 KITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAV 100
K+TD+ R ++Q + N + A DRF+ + W++ L+AV
Sbjct: 73 KLTDY----RFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAV 128
Query: 101 SCISLAAKMKNTHFPLSKFQGDQKL--IFDAQTIHRMELLILDALNWRMRSITPFSFLCF 158
+ +S+A+K PL + + L +F T+ +MEL+IL AL WR+ ++T ++F
Sbjct: 129 TSLSIASKFNEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQT 188
Query: 159 FIS-LFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPSVIAASAVLL 206
+S + D + + + D+I ++K+L++ PSV+A +A+ +
Sbjct: 189 LVSKIGMVGDHMIMNRITNHLLDVI----CDLKMLQYPPSVVATAAIWI 233
>sp|Q14094|CCNI_HUMAN Cyclin-I OS=Homo sapiens GN=CCNI PE=1 SV=1
Length = 377
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 24/237 (10%)
Query: 48 SLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAA 107
S R E + + ++++ N P LA + LDRF++ + P L +A+SC LAA
Sbjct: 43 SQRDEVIQWLAKLKYQFNLYPETFALASSLLDRFLATV---KAHPKYLSCIAISCFFLAA 99
Query: 108 KM--KNTHFPLSKFQG-DQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFE 164
K ++ P+ K D + I RME +ILD LNW + + TP FL F ++
Sbjct: 100 KTVEEDERIPVLKVLARDSFCGCSSSEILRMERIILDKLNWDLHTATPLDFLHIFHAIAV 159
Query: 165 PKDPPLTQALKDRA--------TDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQF 216
P L +L + T + + +LL+FR S++A + V L +L P +
Sbjct: 160 STRPQLLFSLPKLSPSQHLAVLTKQLLHCMACNQLLQFRGSMLALAMVSLEMEKLIP-DW 218
Query: 217 PSFKTSILSSDYVNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQFSVVDYKCTK 273
S +L ++ L C + V L TL SS SV Y+ K
Sbjct: 219 LSLTIELLQKAQMDSSQLIHCRELVAHH---------LSTLQSSLPLNSVYVYRPLK 266
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 15 HQSDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLA 74
H L +L E ++P ++ +C++ D +R+ + +L++ E + LA
Sbjct: 22 HDDRVLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPLA 80
Query: 75 VTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHR 134
+ YLDRF++ P+ L+LL C+ LA+K+K T PL+ ++ I+ +I
Sbjct: 81 INYLDRFLAGVPTPKTH---LQLLGAVCMFLASKLKET-IPLT---AEKLCIYTDNSIKP 133
Query: 135 MELL-----ILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEI 189
ELL +L L W + ++TP F+ + P+ ++ A I ++
Sbjct: 134 QELLEWELVVLGKLKWNLAAVTPHDFIEHILRKL-PQPSEKLSLIRKHAQTFIALCATDF 192
Query: 190 KLLEFRPSVIAASAV 204
K + PS+IA +V
Sbjct: 193 KFAMYPPSMIATGSV 207
>sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D2 OS=Sus scrofa GN=CCND2 PE=2 SV=1
Length = 288
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 14/195 (7%)
Query: 15 HQSDTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLA 74
H L +L E ++P ++ +C++ D +R+ + +L++ E + LA
Sbjct: 22 HDDRVLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPLA 80
Query: 75 VTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHR 134
+ YLDRF++ P+ L+LL C+ LA+K+K T PL+ ++ I+ +I
Sbjct: 81 INYLDRFLAGVPTPKTH---LQLLGAVCMFLASKLKET-IPLT---AEKLCIYTDNSIKP 133
Query: 135 MELL-----ILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEI 189
ELL +L L W + ++TP F+ + + L+ ++ A I ++
Sbjct: 134 QELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPNEKLS-LIRKHAQTFIALCATDF 192
Query: 190 KLLEFRPSVIAASAV 204
K + PS+IA +V
Sbjct: 193 KFAMYPPSMIATGSV 207
>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
Length = 295
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 20 LLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLD 79
L + TE PS ++ +C++ + S+R+ + +L++ E + LA+ YLD
Sbjct: 28 LRAMLKTEETCAPSVSYFKCVQ-KEIVPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLD 86
Query: 80 RFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIH-----R 134
RF+S + + + + L+LL +C+ +A+KMK T PL+ ++ I+ +I +
Sbjct: 87 RFLSLEPLKKSR---LQLLGATCMFVASKMKET-IPLT---AEKLCIYTDNSIRPEELLQ 139
Query: 135 MELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEF 194
MELL+++ L W + ++TP F+ F+S P+ Q ++ A + +++K +
Sbjct: 140 MELLLVNKLKWNLAAMTPHDFIEHFLSKM-PEADENKQTIRKHAQTFVALCATDVKFISN 198
Query: 195 RPSVIAASAVLLS 207
PS++AA +V+ +
Sbjct: 199 PPSMVAAGSVVAA 211
>sp|Q10Q63|CCF31_ORYSJ Putative cyclin-F3-1 OS=Oryza sativa subsp. japonica GN=CYCF3-1
PE=3 SV=1
Length = 389
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 18 DTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTY 77
D L E P N+VQ ++ + +R V + + + N + + AV+Y
Sbjct: 119 DRYLRSLEAEQTRRPMINYVQEIQGGIINMDVRGILVDWMADVAYVFNLQEETLHHAVSY 178
Query: 78 LDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRME 136
+DRF+S+ P K L+LL + + +A+K + H P + F + Q + +ME
Sbjct: 179 VDRFLSKIAFPGDK---LKLLGTTALFVASKYEEIHPPHVRNFSAVTVNTYTTQQVSKME 235
Query: 137 LLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE--- 193
L IL LN+ + S T +FL F++ + +R +++ +E+ LL+
Sbjct: 236 LDILRFLNFDVGSPTVITFLRKFLTSCCGGN-----NSSNRKLELMCNYLAELSLLDDYY 290
Query: 194 --FRPSVIAASAVLLSSYELFPLQFPSFKT 221
F PS++AA+ + + + L P P F +
Sbjct: 291 IRFLPSIVAAACLFVGKFTLNPNTRPWFGS 320
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 18 DTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTY 77
D L A+E+ P ++++ ++ D S+R V ++++ P YL V Y
Sbjct: 197 DIYKHLRASEAKKRPDVDYMERVQ-KDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNY 255
Query: 78 LDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSK---FQGDQKLIFDAQTIHR 134
+DR++S I + K L+LL V+C+ +AAK + P + + D + D +
Sbjct: 256 IDRYLSGNVISRQK---LQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKD--EVLD 310
Query: 135 MELLILDALNWRMRSITPFSFLCFFI-SLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE 193
ME +L+ L + M + T FL F+ + + PL Q L+ A I + E +L
Sbjct: 311 MESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQ-LECMANYIAELSLLEYTMLS 369
Query: 194 FRPSVIAASAVLLSSYELFPLQFP 217
PS++AASA+ L+ Y L P + P
Sbjct: 370 HSPSLVAASAIFLAKYILDPTRRP 393
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 20 LLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLD 79
L + TE PS ++ +C++ + S+R+ + +L++ E + LA+ YLD
Sbjct: 28 LRAMLKTEETCAPSVSYFKCVQ-REIVPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLD 86
Query: 80 RFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIH-----R 134
RF+S + + + + L+LL +C+ +A+KMK T PL+ ++ I+ +I +
Sbjct: 87 RFLSLEPLKKSR---LQLLGATCMFVASKMKET-IPLT---AEKLCIYTDNSIRPEELLQ 139
Query: 135 MELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEF 194
MELL+++ L W + ++TP F+ F+S P+ Q ++ A + +++K +
Sbjct: 140 MELLLVNKLKWNLAAMTPHDFIEHFLSKM-PEADENKQIIRKHAQTFVALCATDVKFISN 198
Query: 195 RPSVIAASAVLLS 207
PS++AA +V+ +
Sbjct: 199 PPSMVAAGSVVAA 211
>sp|Q9Z2V9|CCNI_MOUSE Cyclin-I OS=Mus musculus GN=Ccni PE=2 SV=4
Length = 377
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 48 SLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAA 107
S R E + + ++++ N P LA + LDRF++ + P L +A+SC LAA
Sbjct: 43 SQRDEVIQWLAKLKYQFNLYPETFALASSLLDRFLATV---KAHPKYLNCIAISCFFLAA 99
Query: 108 KM--KNTHFPLSKFQG-DQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISLFE 164
K ++ P+ K D + I RME +ILD LNW + + TP FL F ++
Sbjct: 100 KTVEEDEKIPVLKVLARDSFCGCSSSEILRMERIILDKLNWDLHTATPLDFLHIFHAIAV 159
Query: 165 PKDPPLTQALKDRA--------TDIIFRAHSEIKLLEFRPSVIAASAVLLSSYELFPLQF 216
P L +L + T + + +LL+F+ S++A + V L +L P
Sbjct: 160 SARPQLLFSLPKLSPSQHLAVLTKQLLHCMACNQLLQFKGSMLALAMVSLEMEKLIPDWL 219
Query: 217 PSFKTSILSSDYVNKEDLSKCYDTV 241
P +L ++ L C + V
Sbjct: 220 P-LTIELLQKAQMDSSQLIHCRELV 243
>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
Length = 295
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 14/185 (7%)
Query: 19 TLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L + E PS ++ +C++ + S+R+ + +L++ E + LA+ YL
Sbjct: 27 VLRAMLKAEETCAPSVSYFKCVQ-KEILPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYL 85
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIH----- 133
DRF+S + + + + L+LL +C+ +A+KMK T PL+ ++ I+ +I
Sbjct: 86 DRFLSLEPVKKSR---LQLLGATCMFVASKMKET-IPLT---AEKLCIYTDNSIRPDELL 138
Query: 134 RMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE 193
MEL++++ L W + ++TP F+ F+S P Q ++ A + +++K +
Sbjct: 139 HMELVLVNKLKWNLAAMTPHDFIEHFLSKM-PVAEENKQIIRKHAQTFVALCATDVKFIS 197
Query: 194 FRPSV 198
PS+
Sbjct: 198 NPPSM 202
>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
Length = 295
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 19 TLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L + E PS ++ +C++ + S+R+ + +L++ E + LA+ YL
Sbjct: 27 VLRAMLKAEETCAPSVSYFKCVQ-KEILPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYL 85
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIH----- 133
+RF+S + + + + L+LL +C+ +A+KMK T PL+ ++ I+ +I
Sbjct: 86 NRFLSLEPVKKSR---LQLLGATCMFVASKMKET-IPLT---AEKLCIYTDNSIRPDELL 138
Query: 134 RMELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE 193
+MELL+++ L W + ++TP F+ F+S P Q ++ A + +++K +
Sbjct: 139 QMELLLVNKLKWNLAAMTPHDFIEHFLSKM-PVAEENKQIIRKHAQTFVALCATDVKFIS 197
Query: 194 FRPSV 198
PS+
Sbjct: 198 NPPSM 202
>sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D2 OS=Homo sapiens GN=CCND2 PE=1 SV=1
Length = 289
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 19 TLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L +L E ++P ++ +C++ D +R+ + +L++ E + LA+ YL
Sbjct: 26 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYL 84
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHRMELL 138
DRF++ P+ L+LL C+ LA+K+K T S ++ I+ +I ELL
Sbjct: 85 DRFLAGVPTPKSH---LQLLGAVCMFLASKLKET----SPLTAEKLCIYTDNSIKPQELL 137
Query: 139 -----ILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE 193
+L L W + ++TP F+ + P+ ++ A I ++ K
Sbjct: 138 EWELVVLGKLKWNLAAVTPHDFIEHILRKL-PQQREKLSLIRKHAQTFIALCATDFKFAM 196
Query: 194 FRPSVIAASAV 204
+ PS+IA +V
Sbjct: 197 YPPSMIATGSV 207
>sp|Q04827|CCND2_RAT G1/S-specific cyclin-D2 OS=Rattus norvegicus GN=Ccnd2 PE=2 SV=1
Length = 288
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 19 TLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L +L E ++P ++ +C++ D +R+ + +L++ E + LA+ YL
Sbjct: 25 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYL 83
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHRMELL 138
DRF++ P+ L+LL C+ LA+K+K T PL+ ++ I+ ++ ELL
Sbjct: 84 DRFLAGVPTPKTH---LQLLGAVCMFLASKLKET-IPLT---AEKLCIYTDNSVKPQELL 136
Query: 139 -----ILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE 193
+L L W + ++TP F+ + P+ ++ A I ++ K
Sbjct: 137 EWELVVLGKLKWNLAAVTPHDFIEHILRKL-PQQKEKLSLIRKHAQTFIALCATDFKFAM 195
Query: 194 FRPSVIAASAV 204
+ PS+IA +V
Sbjct: 196 YPPSMIATGSV 206
>sp|P30280|CCND2_MOUSE G1/S-specific cyclin-D2 OS=Mus musculus GN=Ccnd2 PE=2 SV=1
Length = 289
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 19 TLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L +L E ++P ++ +C++ D +R+ + +L++ E + LA+ YL
Sbjct: 25 VLQNLLTIEERYLPQCSYFKCVQ-KDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYL 83
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHRMELL 138
DRF++ P+ L+LL C+ LA+K+K T PL+ ++ I+ ++ ELL
Sbjct: 84 DRFLAGVPTPKTH---LQLLGAVCMFLASKLKET-IPLT---AEKLCIYTDNSVKPQELL 136
Query: 139 -----ILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLE 193
+L L W + ++TP F+ + P+ ++ A I ++ K
Sbjct: 137 EWELVVLGKLKWNLAAVTPHDFIEHILRKL-PQQKEKLSLIRKHAQTFIALCATDFKFAM 195
Query: 194 FRPSVIAASAV 204
+ PS+IA +V
Sbjct: 196 YPPSMIATGSV 206
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 46 YVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISL 105
+ + R + V IL + F P + +A+ Y DR +S+ +P+ L L+A+ C+ +
Sbjct: 103 HCAFRSQLVEWILDVCAGERFGPTTADVAIAYTDRVLSKTVVPKTS---LHLVALCCLHI 159
Query: 106 AAKMKNT--HFP-LSKFQGDQKLIFDAQTIHRMELLILDALNWRMRSITPFSFLCFFISL 162
A K + P +SK + ++ + I +MEL +L L W + +TP FL F++L
Sbjct: 160 AVKYEEIEERVPTMSKLRSWTSNMYSPEIIRKMELAVLIELGWDLGVLTPAHFLESFLAL 219
>sp|P25010|CCNAL_DAUCA G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2
SV=1
Length = 341
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 25/258 (9%)
Query: 27 ESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFISRQE 86
E+ P N+++ ++ D ++R V ++++ P YLA++Y+DR++S
Sbjct: 88 ETKRRPMMNYIEQVQ-KDVTSNMRGVLVDWLVEVSLEYKLLPETLYLAISYVDRYLSVNV 146
Query: 87 IPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRMELLILDALNW 145
+ + K L+LL VS +A+K + ++ F + Q + +ME +L L +
Sbjct: 147 LNRQK---LQLLGVSSFLIASKYEEIKPKNVADFVDITDNTYSQQEVVKMEADLLKTLKF 203
Query: 146 RMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKL-----LEFRPSVIA 200
M S T +FL F ++ E D P + + + +E+ L LEF PS+IA
Sbjct: 204 EMGSPTVKTFLGFIRAVQENPDVPKLK------FEFLANYLAELSLLDYGCLEFVPSLIA 257
Query: 201 ASAVLLSSYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQ--EMVEMDGCESILDTLS 258
AS L+ + + P P S Y +K DL +C + +M G +LS
Sbjct: 258 ASVTFLARFTIRPNVNPWSIALQKCSGYKSK-DLKECVLLLHDLQMGRRGG------SLS 310
Query: 259 SSRTQFSVVDYKCTKSES 276
+ R ++ +KC + S
Sbjct: 311 AVRDKYKKHKFKCVSTLS 328
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 23 LFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYLDRFI 82
L +E + P+ ++++ + + S+R + ++++ P YLAV Y+DR++
Sbjct: 186 LRVSEVNKRPALDYMERTQ-SSINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYL 244
Query: 83 SRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHRMELL---- 138
+ I + L+LL V+C+ +AAK + P Q + T R ELL
Sbjct: 245 TGNAINKQN---LQLLGVTCMMIAAKYEEVCVP----QVEDFCYITDNTYLRNELLEMES 297
Query: 139 -ILDALNWRMRSITPFSFLCFFISLFEP-KDPP--LTQALKDRATDIIFRAHSEIKLLEF 194
+L+ L + + + T FL F+ + K+ P L++ L T++ ++ +L +
Sbjct: 298 SVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLLSECLACYLTELSLLDYA---MLRY 354
Query: 195 RPSVIAASAVLLSSYELFPLQFP 217
PS++AASAV L+ Y L P + P
Sbjct: 355 APSLVAASAVFLAQYTLHPSRKP 377
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 18 DTLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTY 77
D L E+ PS +FV+ ++ + S+R + ++++ P YL V Y
Sbjct: 87 DIYKHLRVAETKKRPSTDFVETIQ-KNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNY 145
Query: 78 LDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSK---FQGDQKLIFDAQTIHR 134
+DR++S + I + K ++LL V+C+ +A+K + P + + D + + +
Sbjct: 146 IDRYLSSKVINRRK---MQLLGVACLLIASKYEEICPPQVEELCYISDN--TYTKDEVLK 200
Query: 135 MELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEF 194
ME +L L + M + T FL F+ + L+ A I + E L+ +
Sbjct: 201 MEASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICY 260
Query: 195 RPSVIAASAVLLSSYELFPLQFP-----SFKTSILSSDYVN 230
PS+IAAS++ L+ + L P + P SF T SD N
Sbjct: 261 VPSLIAASSIFLAKFILKPTENPWNSTLSFYTQYKPSDLCN 301
>sp|P49706|CCND2_CHICK G1/S-specific cyclin-D2 OS=Gallus gallus GN=CCND2 PE=3 SV=1
Length = 291
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 19 TLLDLFATESDHMPSHNFVQCLKITDFYVSLRQETVSLILQIQFACNFEPFISYLAVTYL 78
L +L E ++P ++ +C++ D +R+ + +L++ E + LA+ YL
Sbjct: 26 VLHNLLTIEERYLPQCSYFKCVQ-KDIQPFMRRMVATWMLEVCEEQKCEEEVFPLAMNYL 84
Query: 79 DRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFPLSKFQGDQKLIFDAQTIHRMELL 138
DRF++ +P K L+LL C+ LA+K+K T PL+ ++ I+ +I ELL
Sbjct: 85 DRFLAV--VPTRK-CHLQLLGAVCMFLASKLKET-IPLT---AEKLCIYTDNSIKPQELL 137
Query: 139 -----ILDALNWRMRSITPFSFLCFFI-SLFEPKDPPLTQALKDRATDIIFRAHSEIKLL 192
+L L W + ++TP F+ + L PKD + ++ A I ++
Sbjct: 138 EWELVVLGKLKWNLAAVTPHDFIEHILRKLPLPKDKLVL--IRKHAQTFIALCATDFNFA 195
Query: 193 EFRPSVIAASAV 204
+ PS+IA +V
Sbjct: 196 MYPPSMIATGSV 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,726,703
Number of Sequences: 539616
Number of extensions: 3683631
Number of successful extensions: 12454
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 12226
Number of HSP's gapped (non-prelim): 193
length of query: 318
length of database: 191,569,459
effective HSP length: 117
effective length of query: 201
effective length of database: 128,434,387
effective search space: 25815311787
effective search space used: 25815311787
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)