Query 021050
Match_columns 318
No_of_seqs 410 out of 2951
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 07:13:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021050.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021050hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4667 Predicted esterase [Li 100.0 1.6E-33 3.5E-38 204.4 19.2 250 60-309 10-259 (269)
2 PLN02385 hydrolase; alpha/beta 100.0 2.5E-31 5.3E-36 222.8 27.5 251 59-310 60-347 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 1.4E-30 3.1E-35 216.9 26.5 251 61-312 33-321 (330)
4 PHA02857 monoglyceride lipase; 100.0 2.2E-30 4.8E-35 210.7 26.9 241 66-308 6-273 (276)
5 PRK13604 luxD acyl transferase 100.0 4.3E-30 9.3E-35 203.6 24.0 226 62-294 11-249 (307)
6 PLN02824 hydrolase, alpha/beta 100.0 5.4E-30 1.2E-34 210.2 25.0 238 61-308 11-294 (294)
7 PRK00870 haloalkane dehalogena 100.0 3.9E-30 8.5E-35 211.7 24.1 242 61-308 22-301 (302)
8 PRK10749 lysophospholipase L2; 100.0 1.3E-29 2.9E-34 210.4 26.0 246 61-308 31-329 (330)
9 TIGR02240 PHA_depoly_arom poly 100.0 6E-30 1.3E-34 208.0 22.7 235 68-309 9-267 (276)
10 KOG1455 Lysophospholipase [Lip 100.0 1.1E-29 2.3E-34 195.5 22.0 247 59-308 26-312 (313)
11 PRK03592 haloalkane dehalogena 100.0 2E-29 4.4E-34 206.9 21.0 233 69-310 15-291 (295)
12 PLN02965 Probable pheophorbida 100.0 4.2E-29 9E-34 200.6 21.8 219 84-308 4-253 (255)
13 TIGR03343 biphenyl_bphD 2-hydr 100.0 1E-28 2.2E-33 201.7 23.3 229 73-306 20-281 (282)
14 COG1647 Esterase/lipase [Gener 100.0 2.2E-29 4.9E-34 184.3 16.7 221 83-307 15-243 (243)
15 PLN02652 hydrolase; alpha/beta 100.0 1.2E-27 2.6E-32 200.9 28.6 250 59-312 109-391 (395)
16 TIGR03056 bchO_mg_che_rel puta 100.0 2.5E-28 5.4E-33 199.1 21.9 233 68-306 13-278 (278)
17 KOG4178 Soluble epoxide hydrol 100.0 6.9E-28 1.5E-32 188.6 22.7 236 68-308 29-320 (322)
18 PRK06489 hypothetical protein; 100.0 4.1E-28 8.9E-33 203.9 23.0 250 53-309 28-358 (360)
19 KOG4391 Predicted alpha/beta h 100.0 4.4E-29 9.4E-34 181.7 13.7 253 25-311 24-285 (300)
20 PLN02679 hydrolase, alpha/beta 100.0 1E-27 2.2E-32 201.1 24.2 233 69-307 69-356 (360)
21 PRK10673 acyl-CoA esterase; Pr 100.0 2.6E-28 5.6E-33 196.5 19.8 219 81-307 14-254 (255)
22 PLN03087 BODYGUARD 1 domain co 100.0 1.8E-27 3.9E-32 202.3 24.7 238 64-307 179-478 (481)
23 COG2267 PldB Lysophospholipase 100.0 2.4E-27 5.2E-32 191.8 24.4 248 61-310 10-296 (298)
24 PRK03204 haloalkane dehalogena 100.0 2E-27 4.3E-32 193.6 24.0 235 62-305 16-285 (286)
25 TIGR03611 RutD pyrimidine util 100.0 1.1E-27 2.3E-32 193.0 21.2 218 81-306 11-256 (257)
26 PLN02511 hydrolase 100.0 3.2E-27 6.9E-32 199.3 22.6 253 59-311 70-368 (388)
27 PLN02578 hydrolase 100.0 2.1E-27 4.6E-32 199.0 21.0 229 69-306 74-353 (354)
28 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.8E-27 4E-32 190.8 19.1 222 77-306 6-251 (251)
29 PLN03084 alpha/beta hydrolase 100.0 1.1E-26 2.3E-31 194.0 24.0 234 67-307 111-383 (383)
30 PRK05077 frsA fermentation/res 100.0 1.1E-26 2.4E-31 196.7 23.4 235 59-309 167-413 (414)
31 PRK10349 carboxylesterase BioH 100.0 1.1E-26 2.3E-31 187.0 19.9 213 81-306 10-254 (256)
32 TIGR01250 pro_imino_pep_2 prol 99.9 7.4E-26 1.6E-30 185.3 22.6 233 69-306 10-288 (288)
33 PRK11126 2-succinyl-6-hydroxy- 99.9 7.7E-26 1.7E-30 180.6 21.5 211 83-307 2-241 (242)
34 PLN02211 methyl indole-3-aceta 99.9 1.5E-25 3.3E-30 180.8 23.2 232 69-307 5-269 (273)
35 KOG1454 Predicted hydrolase/ac 99.9 7.6E-26 1.7E-30 184.8 21.5 243 61-308 26-324 (326)
36 TIGR01607 PST-A Plasmodium sub 99.9 2.4E-25 5.1E-30 184.4 24.1 242 65-306 2-331 (332)
37 PRK07581 hypothetical protein; 99.9 5.7E-26 1.2E-30 189.9 18.8 236 69-310 24-338 (339)
38 PRK10985 putative hydrolase; P 99.9 6.2E-25 1.4E-29 181.9 24.8 248 62-310 33-322 (324)
39 PF12697 Abhydrolase_6: Alpha/ 99.9 7.3E-27 1.6E-31 184.4 12.6 208 86-299 1-227 (228)
40 KOG4409 Predicted hydrolase/ac 99.9 1.5E-25 3.2E-30 176.1 18.5 243 59-307 66-363 (365)
41 TIGR01249 pro_imino_pep_1 prol 99.9 6E-25 1.3E-29 181.0 22.7 237 64-308 8-305 (306)
42 KOG1552 Predicted alpha/beta h 99.9 5.7E-25 1.2E-29 166.3 20.2 214 61-311 36-255 (258)
43 PRK08775 homoserine O-acetyltr 99.9 1.7E-25 3.7E-30 187.0 19.3 236 68-309 43-340 (343)
44 TIGR03100 hydr1_PEP hydrolase, 99.9 1E-24 2.2E-29 176.2 23.1 241 61-307 3-274 (274)
45 TIGR01738 bioH putative pimelo 99.9 1.6E-25 3.4E-30 178.9 17.6 209 84-305 5-245 (245)
46 PRK14875 acetoin dehydrogenase 99.9 2E-25 4.3E-30 189.5 18.8 230 69-307 117-370 (371)
47 TIGR03695 menH_SHCHC 2-succiny 99.9 2.3E-25 5.1E-30 178.4 18.0 217 83-306 1-251 (251)
48 PLN02894 hydrolase, alpha/beta 99.9 6.1E-24 1.3E-28 180.1 25.7 237 72-312 93-389 (402)
49 TIGR01392 homoserO_Ac_trn homo 99.9 6.2E-25 1.3E-29 184.2 18.5 235 69-306 14-351 (351)
50 PRK10566 esterase; Provisional 99.9 3.3E-24 7.2E-29 171.8 20.7 206 82-309 26-249 (249)
51 PRK00175 metX homoserine O-ace 99.9 3E-24 6.4E-29 181.4 19.7 239 69-310 31-376 (379)
52 COG1506 DAP2 Dipeptidyl aminop 99.9 5.4E-24 1.2E-28 189.6 17.3 237 59-311 364-619 (620)
53 PRK11071 esterase YqiA; Provis 99.9 2E-23 4.4E-28 158.5 17.3 186 84-306 2-189 (190)
54 PRK05855 short chain dehydroge 99.9 4.4E-23 9.5E-28 185.4 21.0 236 66-309 8-293 (582)
55 PLN02980 2-oxoglutarate decarb 99.9 1.8E-22 3.8E-27 195.8 24.5 227 82-315 1370-1646(1655)
56 COG0429 Predicted hydrolase of 99.9 1.4E-22 3E-27 158.7 18.8 251 61-311 50-343 (345)
57 PLN02872 triacylglycerol lipas 99.9 1.4E-22 2.9E-27 169.7 18.9 252 59-311 43-392 (395)
58 COG2945 Predicted hydrolase of 99.9 2.6E-22 5.6E-27 144.2 16.9 194 61-306 5-205 (210)
59 KOG2382 Predicted alpha/beta h 99.9 5.7E-22 1.2E-26 155.7 18.8 224 81-308 50-313 (315)
60 PF12695 Abhydrolase_5: Alpha/ 99.9 3.1E-22 6.8E-27 146.8 15.3 142 85-289 1-145 (145)
61 KOG2984 Predicted hydrolase [G 99.9 1.4E-22 3.1E-27 146.2 12.8 241 61-307 24-275 (277)
62 TIGR03101 hydr2_PEP hydrolase, 99.9 7.7E-21 1.7E-25 150.5 23.0 138 62-199 2-144 (266)
63 PF00326 Peptidase_S9: Prolyl 99.9 9.4E-22 2E-26 153.6 14.2 195 101-311 3-212 (213)
64 KOG1838 Alpha/beta hydrolase [ 99.9 5E-20 1.1E-24 149.7 22.6 250 59-309 92-389 (409)
65 TIGR01836 PHA_synth_III_C poly 99.9 1.2E-20 2.6E-25 158.2 18.1 235 68-307 45-349 (350)
66 PF01738 DLH: Dienelactone hyd 99.9 5E-20 1.1E-24 144.2 19.4 179 82-309 13-218 (218)
67 PRK11460 putative hydrolase; P 99.9 3E-20 6.5E-25 146.1 17.5 175 81-310 14-210 (232)
68 KOG2564 Predicted acetyltransf 99.9 8.7E-20 1.9E-24 138.7 18.2 245 59-309 49-328 (343)
69 PRK10115 protease 2; Provision 99.9 1.2E-19 2.6E-24 162.9 20.9 242 59-317 415-684 (686)
70 COG0412 Dienelactone hydrolase 99.8 6.6E-19 1.4E-23 137.7 21.8 199 61-310 3-235 (236)
71 PF05448 AXE1: Acetyl xylan es 99.8 6.1E-19 1.3E-23 143.7 22.1 231 59-308 55-320 (320)
72 PRK06765 homoserine O-acetyltr 99.8 2.5E-19 5.3E-24 150.3 19.9 232 71-307 41-387 (389)
73 PF00561 Abhydrolase_1: alpha/ 99.8 4.4E-20 9.6E-25 146.1 10.4 187 113-302 1-229 (230)
74 TIGR02821 fghA_ester_D S-formy 99.8 1.1E-17 2.3E-22 135.5 23.5 224 61-307 14-273 (275)
75 PF06500 DUF1100: Alpha/beta h 99.8 3E-19 6.4E-24 146.4 14.2 233 59-309 164-410 (411)
76 COG3208 GrsT Predicted thioest 99.8 4.3E-19 9.2E-24 133.8 13.7 221 80-307 4-235 (244)
77 PRK10162 acetyl esterase; Prov 99.8 7.5E-18 1.6E-22 138.9 22.2 227 59-310 56-317 (318)
78 TIGR01838 PHA_synth_I poly(R)- 99.8 1.4E-18 3.1E-23 149.6 17.0 205 82-291 187-457 (532)
79 PRK07868 acyl-CoA synthetase; 99.8 3E-18 6.6E-23 161.3 19.5 225 82-311 66-364 (994)
80 PLN02442 S-formylglutathione h 99.8 1.7E-17 3.6E-22 134.5 21.1 209 61-291 19-264 (283)
81 PLN00021 chlorophyllase 99.8 2.8E-17 6E-22 133.9 19.4 186 81-312 50-287 (313)
82 PF02230 Abhydrolase_2: Phosph 99.8 3.9E-18 8.4E-23 133.1 13.3 179 81-309 12-216 (216)
83 PF02273 Acyl_transf_2: Acyl t 99.8 7.7E-17 1.7E-21 120.5 18.6 224 64-294 6-242 (294)
84 TIGR00976 /NonD putative hydro 99.8 3.8E-17 8.2E-22 144.6 19.4 128 65-193 1-136 (550)
85 TIGR01840 esterase_phb esteras 99.8 2.1E-17 4.5E-22 128.7 15.4 171 81-276 11-195 (212)
86 COG3458 Acetyl esterase (deace 99.7 7.4E-17 1.6E-21 122.4 14.3 234 59-308 55-317 (321)
87 COG0596 MhpC Predicted hydrola 99.7 5.1E-16 1.1E-20 125.3 19.7 217 83-306 21-280 (282)
88 PF05728 UPF0227: Uncharacteri 99.7 6.7E-16 1.5E-20 115.5 15.8 183 86-305 2-186 (187)
89 COG0400 Predicted esterase [Ge 99.7 9.8E-16 2.1E-20 116.0 13.8 173 82-309 17-206 (207)
90 PF06342 DUF1057: Alpha/beta h 99.7 2.7E-14 5.8E-19 110.2 20.2 124 61-189 7-137 (297)
91 PF09752 DUF2048: Uncharacteri 99.7 8.5E-15 1.8E-19 117.2 17.3 223 82-306 91-347 (348)
92 KOG3043 Predicted hydrolase re 99.7 6E-15 1.3E-19 109.2 14.7 186 73-309 28-241 (242)
93 PF06821 Ser_hydrolase: Serine 99.7 1E-15 2.2E-20 113.4 10.2 154 86-292 1-156 (171)
94 COG4757 Predicted alpha/beta h 99.6 2.6E-15 5.7E-20 111.4 10.5 238 63-305 8-280 (281)
95 PF08538 DUF1749: Protein of u 99.6 8.7E-14 1.9E-18 109.9 18.6 218 82-306 32-303 (303)
96 PRK05371 x-prolyl-dipeptidyl a 99.6 2.9E-14 6.4E-19 129.2 18.2 206 103-312 270-523 (767)
97 PF02129 Peptidase_S15: X-Pro 99.6 2E-14 4.3E-19 116.3 15.3 122 69-193 1-140 (272)
98 PF07859 Abhydrolase_3: alpha/ 99.6 1.6E-15 3.6E-20 118.3 8.3 99 86-191 1-112 (211)
99 COG3571 Predicted hydrolase of 99.6 1.4E-13 3.1E-18 96.2 16.8 179 83-307 14-210 (213)
100 KOG1515 Arylacetamide deacetyl 99.6 1.9E-13 4.1E-18 111.1 19.3 228 59-308 62-335 (336)
101 TIGR03230 lipo_lipase lipoprot 99.6 1.9E-14 4.1E-19 120.9 13.7 110 81-190 39-155 (442)
102 TIGR01849 PHB_depoly_PhaZ poly 99.6 2.4E-13 5.2E-18 113.1 19.5 219 84-308 103-406 (406)
103 COG2021 MET2 Homoserine acetyl 99.6 5.1E-14 1.1E-18 112.9 14.5 235 70-307 35-367 (368)
104 COG0657 Aes Esterase/lipase [L 99.6 6.3E-13 1.4E-17 110.0 21.6 215 68-306 59-308 (312)
105 PF12715 Abhydrolase_7: Abhydr 99.6 1.2E-14 2.5E-19 117.6 10.8 130 59-188 87-259 (390)
106 cd00707 Pancreat_lipase_like P 99.6 1.5E-14 3.2E-19 116.4 10.6 111 81-191 34-149 (275)
107 TIGR01839 PHA_synth_II poly(R) 99.6 5.5E-14 1.2E-18 120.3 14.5 106 82-192 214-331 (560)
108 PF00975 Thioesterase: Thioest 99.6 2.8E-14 6.2E-19 112.8 11.2 211 84-305 1-229 (229)
109 KOG2624 Triglyceride lipase-ch 99.6 3.2E-13 6.8E-18 112.1 17.6 133 59-191 47-201 (403)
110 KOG2100 Dipeptidyl aminopeptid 99.6 1.5E-13 3.3E-18 124.2 17.1 229 59-313 499-752 (755)
111 PF06057 VirJ: Bacterial virul 99.6 4.2E-13 9.2E-18 98.3 15.3 179 84-307 3-191 (192)
112 PF08840 BAAT_C: BAAT / Acyl-C 99.5 3.1E-14 6.7E-19 110.1 9.0 171 139-311 3-213 (213)
113 PF06028 DUF915: Alpha/beta hy 99.5 2.6E-13 5.5E-18 106.5 13.8 204 82-306 10-253 (255)
114 PF12740 Chlorophyllase2: Chlo 99.5 4.4E-12 9.5E-17 98.5 20.1 101 80-189 14-131 (259)
115 PF03096 Ndr: Ndr family; Int 99.5 4.9E-13 1.1E-17 104.6 14.0 235 64-307 3-278 (283)
116 KOG2281 Dipeptidyl aminopeptid 99.5 2.9E-12 6.2E-17 108.7 18.5 228 59-307 612-866 (867)
117 PF12146 Hydrolase_4: Putative 99.5 2.2E-13 4.8E-18 86.9 8.5 76 70-147 1-79 (79)
118 KOG2931 Differentiation-relate 99.5 2E-11 4.3E-16 94.4 19.5 239 60-307 22-305 (326)
119 KOG2551 Phospholipase/carboxyh 99.5 3.8E-12 8.3E-17 94.6 15.0 182 82-311 4-223 (230)
120 KOG4627 Kynurenine formamidase 99.5 9.8E-13 2.1E-17 96.0 11.5 199 60-290 45-248 (270)
121 COG3545 Predicted esterase of 99.5 8.1E-12 1.7E-16 89.5 15.4 172 83-307 2-178 (181)
122 PF10503 Esterase_phd: Esteras 99.5 9.6E-13 2.1E-17 100.9 11.5 169 82-275 15-195 (220)
123 PF10230 DUF2305: Uncharacteri 99.4 1.2E-11 2.7E-16 99.0 17.5 105 83-189 2-122 (266)
124 PF07224 Chlorophyllase: Chlor 99.4 1.1E-11 2.4E-16 94.3 16.0 102 80-190 43-158 (307)
125 TIGR03502 lipase_Pla1_cef extr 99.4 1E-12 2.2E-17 117.3 12.1 112 62-175 419-575 (792)
126 PF03403 PAF-AH_p_II: Platelet 99.4 6E-12 1.3E-16 105.4 16.0 179 81-311 98-361 (379)
127 PF03959 FSH1: Serine hydrolas 99.4 4.7E-12 1E-16 98.2 10.4 165 82-294 3-206 (212)
128 KOG1553 Predicted alpha/beta h 99.4 8.2E-12 1.8E-16 98.5 10.8 127 59-192 213-348 (517)
129 PRK04940 hypothetical protein; 99.4 1.7E-10 3.6E-15 84.7 16.8 173 86-306 2-178 (180)
130 COG2936 Predicted acyl esteras 99.4 3.3E-11 7.1E-16 103.0 14.9 133 59-192 18-162 (563)
131 COG1505 Serine proteases of th 99.4 1.3E-11 2.7E-16 104.5 12.2 236 59-309 393-647 (648)
132 COG4099 Predicted peptidase [G 99.3 8.2E-11 1.8E-15 91.1 14.2 154 68-276 169-342 (387)
133 KOG2112 Lysophospholipase [Lip 99.3 3.1E-11 6.7E-16 89.2 11.3 175 83-307 3-203 (206)
134 PF05677 DUF818: Chlamydia CHL 99.3 6.3E-10 1.4E-14 88.6 17.5 114 59-176 111-236 (365)
135 PF03583 LIP: Secretory lipase 99.3 4.1E-10 8.8E-15 91.4 16.5 205 103-314 17-287 (290)
136 COG4188 Predicted dienelactone 99.3 5.8E-11 1.3E-15 95.8 11.3 95 82-178 70-182 (365)
137 COG3243 PhaC Poly(3-hydroxyalk 99.3 4.9E-11 1.1E-15 97.3 10.7 107 83-192 107-220 (445)
138 PRK10252 entF enterobactin syn 99.3 1.4E-10 2.9E-15 114.1 15.2 217 81-309 1066-1294(1296)
139 KOG2237 Predicted serine prote 99.2 1.3E-10 2.9E-15 99.0 11.2 238 59-311 440-708 (712)
140 COG3509 LpqC Poly(3-hydroxybut 99.2 2.1E-09 4.6E-14 83.8 16.8 126 61-189 36-179 (312)
141 COG4814 Uncharacterized protei 99.2 1.1E-09 2.4E-14 83.1 13.9 203 83-307 45-286 (288)
142 PF07819 PGAP1: PGAP1-like pro 99.2 8.9E-10 1.9E-14 85.9 13.2 107 82-193 3-127 (225)
143 COG1770 PtrB Protease II [Amin 99.2 4.1E-09 8.8E-14 90.8 18.0 222 59-293 418-660 (682)
144 KOG3847 Phospholipase A2 (plat 99.2 1.2E-09 2.7E-14 85.3 13.0 108 81-190 116-276 (399)
145 KOG3975 Uncharacterized conser 99.1 5E-08 1.1E-12 74.0 19.5 223 81-305 27-300 (301)
146 PTZ00472 serine carboxypeptida 99.1 3.3E-08 7.1E-13 85.5 19.9 127 61-190 50-217 (462)
147 PF12048 DUF3530: Protein of u 99.1 1.3E-07 2.9E-12 77.3 22.3 203 61-308 63-309 (310)
148 PF10340 DUF2424: Protein of u 99.1 3.9E-09 8.4E-14 86.6 12.9 106 82-192 121-238 (374)
149 KOG1551 Uncharacterized conser 99.1 4.4E-09 9.6E-14 80.3 11.9 230 77-309 107-367 (371)
150 PF01674 Lipase_2: Lipase (cla 99.0 3.1E-10 6.7E-15 87.1 5.5 91 84-176 2-96 (219)
151 KOG2565 Predicted hydrolases o 99.0 7.8E-09 1.7E-13 82.9 13.4 110 69-183 132-258 (469)
152 KOG3253 Predicted alpha/beta h 99.0 5E-09 1.1E-13 88.9 12.3 180 82-309 175-375 (784)
153 COG3319 Thioesterase domains o 99.0 2.5E-09 5.4E-14 83.9 9.1 100 84-190 1-104 (257)
154 PRK10439 enterobactin/ferric e 99.0 1.5E-07 3.2E-12 80.2 19.7 128 59-189 179-323 (411)
155 PF00151 Lipase: Lipase; Inte 99.0 1.3E-09 2.8E-14 89.6 6.5 111 81-191 69-189 (331)
156 PLN02733 phosphatidylcholine-s 99.0 3.7E-09 8.1E-14 89.9 9.4 91 99-192 108-204 (440)
157 PF11144 DUF2920: Protein of u 98.9 2.1E-07 4.6E-12 76.7 18.3 235 70-307 19-367 (403)
158 COG3150 Predicted esterase [Ge 98.9 1.7E-07 3.8E-12 66.6 14.4 184 86-306 2-187 (191)
159 KOG4840 Predicted hydrolases o 98.9 4.3E-07 9.3E-12 67.8 16.2 104 82-192 35-147 (299)
160 PF00756 Esterase: Putative es 98.8 2.7E-08 5.9E-13 79.8 10.1 113 80-192 21-153 (251)
161 PF11339 DUF3141: Protein of u 98.8 9.5E-07 2.1E-11 74.6 17.9 84 103-192 92-178 (581)
162 smart00824 PKS_TE Thioesterase 98.8 2.5E-07 5.4E-12 71.9 14.1 95 88-189 2-102 (212)
163 PF05705 DUF829: Eukaryotic pr 98.8 3.9E-08 8.4E-13 78.2 8.9 209 85-305 1-240 (240)
164 PF05990 DUF900: Alpha/beta hy 98.7 1.9E-07 4.2E-12 73.3 11.4 110 81-191 16-139 (233)
165 PF00450 Peptidase_S10: Serine 98.7 5.3E-07 1.1E-11 78.0 15.1 128 62-192 15-184 (415)
166 cd00312 Esterase_lipase Estera 98.7 1.1E-07 2.4E-12 84.1 9.6 120 68-190 76-214 (493)
167 PLN02606 palmitoyl-protein thi 98.7 2.1E-06 4.6E-11 68.4 15.6 102 82-190 25-133 (306)
168 COG1073 Hydrolases of the alph 98.6 3.5E-06 7.5E-11 69.3 16.2 221 82-309 48-298 (299)
169 PF05577 Peptidase_S28: Serine 98.6 2.1E-07 4.5E-12 80.8 9.1 108 82-190 28-149 (434)
170 COG2272 PnbA Carboxylesterase 98.6 3.1E-07 6.8E-12 77.2 9.1 122 68-190 77-218 (491)
171 PLN02633 palmitoyl protein thi 98.6 2.8E-05 6.1E-10 62.2 19.0 106 81-190 23-132 (314)
172 KOG2541 Palmitoyl protein thio 98.5 1.2E-05 2.7E-10 62.1 14.8 101 84-190 24-129 (296)
173 PF10142 PhoPQ_related: PhoPQ- 98.5 4.1E-06 8.9E-11 69.4 12.8 150 153-312 170-324 (367)
174 PF00135 COesterase: Carboxyle 98.5 6.9E-07 1.5E-11 80.0 9.0 107 82-189 124-245 (535)
175 COG3946 VirJ Type IV secretory 98.5 1.5E-06 3.3E-11 70.9 9.8 89 82-177 259-348 (456)
176 PF05057 DUF676: Putative seri 98.4 1.3E-05 2.7E-10 62.5 13.9 90 82-174 3-97 (217)
177 PF04301 DUF452: Protein of un 98.4 5E-06 1.1E-10 63.3 10.4 178 81-291 9-204 (213)
178 KOG3101 Esterase D [General fu 98.4 5.2E-06 1.1E-10 61.7 9.5 109 82-190 43-177 (283)
179 PLN02209 serine carboxypeptida 98.4 0.00024 5.3E-09 61.1 21.1 128 61-191 42-214 (437)
180 PF08386 Abhydrolase_4: TAP-li 98.3 2.9E-06 6.4E-11 57.4 6.5 59 249-307 34-93 (103)
181 COG4782 Uncharacterized protei 98.3 1.2E-05 2.7E-10 65.0 10.5 110 81-191 114-236 (377)
182 PLN03016 sinapoylglucose-malat 98.2 0.00072 1.6E-08 58.3 21.5 128 62-190 41-211 (433)
183 COG1075 LipA Predicted acetylt 98.2 4.2E-06 9.1E-11 69.6 7.8 102 83-192 59-167 (336)
184 KOG3724 Negative regulator of 98.2 1.4E-05 3E-10 70.8 10.2 105 82-191 88-222 (973)
185 PF02450 LCAT: Lecithin:choles 98.2 2.7E-05 5.8E-10 66.3 11.9 83 100-190 66-161 (389)
186 COG0627 Predicted esterase [Ge 98.1 4E-05 8.7E-10 62.6 10.9 225 82-310 53-313 (316)
187 KOG2183 Prolylcarboxypeptidase 98.1 1.8E-05 4E-10 65.0 8.3 104 84-188 81-201 (492)
188 PF05576 Peptidase_S37: PS-10 98.1 8.2E-05 1.8E-09 61.5 11.9 109 78-190 58-170 (448)
189 KOG1282 Serine carboxypeptidas 98.1 0.0012 2.6E-08 56.6 18.9 126 61-190 47-214 (454)
190 PF02089 Palm_thioest: Palmito 98.0 1.9E-05 4.2E-10 62.5 7.0 108 80-190 2-117 (279)
191 COG2382 Fes Enterochelin ester 97.9 0.00031 6.8E-09 55.9 12.3 108 82-191 97-214 (299)
192 COG4553 DepA Poly-beta-hydroxy 97.8 0.0049 1.1E-07 48.7 15.9 105 82-192 102-212 (415)
193 PLN02213 sinapoylglucose-malat 97.6 0.02 4.3E-07 47.6 18.2 59 249-307 233-316 (319)
194 KOG2182 Hydrolytic enzymes of 97.6 0.0013 2.8E-08 55.9 11.1 112 81-192 84-210 (514)
195 KOG3967 Uncharacterized conser 97.6 0.0015 3.3E-08 49.0 10.0 106 82-188 100-226 (297)
196 PLN02517 phosphatidylcholine-s 97.6 0.00023 4.9E-09 62.1 6.6 90 99-190 156-264 (642)
197 PF07082 DUF1350: Protein of u 97.5 0.0028 6E-08 49.3 11.7 102 77-187 11-123 (250)
198 KOG1516 Carboxylesterase and r 97.4 0.0008 1.7E-08 60.5 8.9 105 83-191 112-234 (545)
199 COG2939 Carboxypeptidase C (ca 97.4 0.01 2.2E-07 50.9 14.3 103 82-187 100-234 (498)
200 COG4947 Uncharacterized protei 97.3 0.0017 3.7E-08 47.0 7.9 54 139-192 84-139 (227)
201 PF06259 Abhydrolase_8: Alpha/ 97.3 0.014 2.9E-07 43.6 12.7 107 82-188 18-143 (177)
202 cd00741 Lipase Lipase. Lipase 97.3 0.00083 1.8E-08 49.3 6.0 54 138-191 10-69 (153)
203 PF04083 Abhydro_lipase: Parti 97.3 0.00064 1.4E-08 41.0 4.2 40 59-98 11-58 (63)
204 COG2819 Predicted hydrolase of 97.2 0.024 5.2E-07 44.8 13.7 39 153-191 135-174 (264)
205 KOG4388 Hormone-sensitive lipa 97.2 0.0011 2.5E-08 57.2 6.8 98 82-189 395-508 (880)
206 COG4287 PqaA PhoPQ-activated p 97.2 0.0013 2.7E-08 53.7 6.7 142 153-309 232-388 (507)
207 KOG2369 Lecithin:cholesterol a 97.0 0.0021 4.6E-08 54.4 6.7 85 99-188 124-224 (473)
208 PF11187 DUF2974: Protein of u 96.9 0.0026 5.6E-08 49.6 5.9 44 146-189 75-123 (224)
209 PF11288 DUF3089: Protein of u 96.9 0.0028 6E-08 48.3 5.7 72 104-176 38-116 (207)
210 PF01764 Lipase_3: Lipase (cla 96.8 0.0024 5.2E-08 46.0 4.8 36 141-176 49-85 (140)
211 TIGR03712 acc_sec_asp2 accesso 96.6 0.2 4.3E-06 43.2 15.0 102 82-190 288-391 (511)
212 PF01083 Cutinase: Cutinase; 96.6 0.011 2.3E-07 44.6 7.0 103 85-189 7-122 (179)
213 cd00519 Lipase_3 Lipase (class 96.6 0.005 1.1E-07 48.6 5.4 38 139-176 111-149 (229)
214 KOG2521 Uncharacterized conser 96.5 0.2 4.3E-06 41.7 14.1 225 81-313 36-295 (350)
215 PLN02454 triacylglycerol lipas 96.1 0.013 2.9E-07 49.5 5.7 38 138-175 208-248 (414)
216 PF06850 PHB_depo_C: PHB de-po 95.7 0.02 4.3E-07 42.8 4.5 60 249-308 134-202 (202)
217 COG2830 Uncharacterized protei 95.6 0.036 7.7E-07 39.8 5.1 78 82-187 10-88 (214)
218 PF07519 Tannase: Tannase and 95.5 0.25 5.5E-06 43.5 11.3 60 249-308 353-427 (474)
219 PLN02310 triacylglycerol lipas 95.4 0.023 5.1E-07 48.0 4.5 37 139-175 192-229 (405)
220 PLN02162 triacylglycerol lipas 95.4 0.057 1.2E-06 46.3 6.8 22 153-174 276-297 (475)
221 PLN00413 triacylglycerol lipas 95.3 0.028 6.1E-07 48.2 4.5 22 153-174 282-303 (479)
222 KOG4372 Predicted alpha/beta h 95.2 0.037 8E-07 46.2 4.8 91 80-175 77-170 (405)
223 PLN03037 lipase class 3 family 95.1 0.032 7E-07 48.4 4.3 37 139-175 301-338 (525)
224 PLN02571 triacylglycerol lipas 95.0 0.052 1.1E-06 46.1 5.3 20 156-175 227-246 (413)
225 KOG1202 Animal-type fatty acid 94.9 0.13 2.8E-06 49.2 7.7 96 81-190 2121-2220(2376)
226 PLN02934 triacylglycerol lipas 94.8 0.044 9.6E-07 47.5 4.3 34 142-175 307-341 (515)
227 PLN02408 phospholipase A1 94.7 0.053 1.1E-06 45.3 4.6 21 156-176 201-221 (365)
228 PLN02324 triacylglycerol lipas 94.6 0.075 1.6E-06 45.1 5.2 36 140-175 197-235 (415)
229 PLN02847 triacylglycerol lipas 94.3 0.32 6.9E-06 43.2 8.6 23 153-175 249-271 (633)
230 PLN02719 triacylglycerol lipas 94.1 0.11 2.3E-06 45.2 5.2 21 155-175 298-318 (518)
231 PF05277 DUF726: Protein of un 93.9 0.18 4E-06 42.0 6.0 40 153-192 218-263 (345)
232 PLN02753 triacylglycerol lipas 93.9 0.13 2.8E-06 44.9 5.3 21 155-175 312-332 (531)
233 PLN02761 lipase class 3 family 93.7 0.1 2.2E-06 45.4 4.4 21 155-175 294-314 (527)
234 PLN02802 triacylglycerol lipas 93.7 0.11 2.3E-06 45.2 4.4 21 156-176 331-351 (509)
235 PF08237 PE-PPE: PE-PPE domain 93.7 0.44 9.6E-06 37.3 7.5 82 112-194 2-94 (225)
236 PF03283 PAE: Pectinacetyleste 93.5 1.8 4E-05 36.7 11.4 37 139-175 137-176 (361)
237 COG0529 CysC Adenylylsulfate k 93.3 1.2 2.7E-05 33.0 8.7 47 81-127 20-68 (197)
238 KOG4569 Predicted lipase [Lipi 93.0 0.13 2.9E-06 43.0 4.1 35 139-176 158-192 (336)
239 PF07519 Tannase: Tannase and 92.0 0.27 5.9E-06 43.3 4.7 81 109-190 56-151 (474)
240 PF09994 DUF2235: Uncharacteri 92.0 1.6 3.4E-05 35.6 8.8 93 84-176 2-113 (277)
241 KOG4540 Putative lipase essent 91.5 0.28 6.1E-06 39.0 3.8 34 153-187 274-307 (425)
242 COG5153 CVT17 Putative lipase 91.5 0.28 6.1E-06 39.0 3.8 34 153-187 274-307 (425)
243 PF06309 Torsin: Torsin; Inte 90.1 2.4 5.1E-05 29.7 6.9 34 80-113 49-82 (127)
244 PF09949 DUF2183: Uncharacteri 89.7 2.9 6.3E-05 28.0 6.9 81 100-183 12-96 (100)
245 PF06441 EHN: Epoxide hydrolas 89.2 0.79 1.7E-05 31.4 4.1 28 69-96 76-105 (112)
246 KOG2029 Uncharacterized conser 88.8 1.8 3.8E-05 38.6 6.7 50 139-188 507-571 (697)
247 KOG1532 GTPase XAB1, interacts 88.3 12 0.00026 30.2 14.1 107 82-188 17-159 (366)
248 COG3673 Uncharacterized conser 88.0 8.7 0.00019 31.6 9.6 97 80-176 28-143 (423)
249 PF10081 Abhydrolase_9: Alpha/ 86.0 5.7 0.00012 32.1 7.6 38 153-190 107-148 (289)
250 COG4822 CbiK Cobalamin biosynt 84.7 8.1 0.00018 29.7 7.4 62 82-160 137-199 (265)
251 KOG4389 Acetylcholinesterase/B 84.2 2.7 5.9E-05 36.6 5.4 104 82-190 134-256 (601)
252 KOG1283 Serine carboxypeptidas 84.1 9.4 0.0002 31.5 8.1 121 69-191 12-168 (414)
253 KOG2385 Uncharacterized conser 83.0 3.6 7.9E-05 36.0 5.7 41 153-193 445-491 (633)
254 COG0541 Ffh Signal recognition 81.8 26 0.00057 30.4 10.2 102 81-185 97-247 (451)
255 PF01583 APS_kinase: Adenylyls 80.4 2.9 6.4E-05 30.6 3.8 38 83-120 1-38 (156)
256 PF12242 Eno-Rase_NADH_b: NAD( 75.7 8.5 0.00018 24.1 4.2 41 137-177 18-62 (78)
257 cd07198 Patatin Patatin-like p 74.4 6 0.00013 29.5 4.2 35 143-177 14-48 (172)
258 PF06792 UPF0261: Uncharacteri 73.2 61 0.0013 28.0 11.3 96 87-183 4-124 (403)
259 PRK12467 peptide synthase; Pro 73.1 16 0.00035 41.9 8.5 87 83-176 3692-3778(3956)
260 cd07207 Pat_ExoU_VipD_like Exo 72.6 6.9 0.00015 29.8 4.3 34 143-176 15-48 (194)
261 PRK10279 hypothetical protein; 70.4 6.5 0.00014 32.5 3.8 34 143-176 21-54 (300)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 70.3 8 0.00017 32.1 4.3 34 143-176 31-64 (306)
263 cd07210 Pat_hypo_W_succinogene 70.2 9.3 0.0002 30.0 4.5 33 144-176 17-49 (221)
264 PRK09273 hypothetical protein; 69.8 50 0.0011 25.6 8.4 79 99-187 17-95 (211)
265 PRK02399 hypothetical protein; 68.9 77 0.0017 27.4 11.2 96 87-183 6-126 (406)
266 cd03818 GT1_ExpC_like This fam 68.9 61 0.0013 27.9 9.7 37 86-126 2-38 (396)
267 PRK05282 (alpha)-aspartyl dipe 68.3 25 0.00055 27.8 6.5 40 82-121 30-70 (233)
268 KOG0780 Signal recognition par 67.7 81 0.0018 27.2 9.6 39 80-118 97-135 (483)
269 COG3340 PepE Peptidase E [Amin 66.4 20 0.00044 27.7 5.3 41 81-121 30-71 (224)
270 KOG2170 ATPase of the AAA+ sup 65.7 32 0.0007 28.4 6.6 34 80-113 106-139 (344)
271 cd07228 Pat_NTE_like_bacteria 65.2 14 0.00031 27.6 4.5 34 144-177 17-50 (175)
272 PF00448 SRP54: SRP54-type pro 64.8 52 0.0011 25.2 7.5 73 102-185 73-148 (196)
273 TIGR03709 PPK2_rel_1 polyphosp 64.5 9.3 0.0002 30.8 3.5 41 81-121 53-93 (264)
274 COG1073 Hydrolases of the alph 64.2 0.34 7.3E-06 39.6 -4.9 93 82-175 87-180 (299)
275 cd07205 Pat_PNPLA6_PNPLA7_NTE1 64.1 15 0.00033 27.4 4.5 34 143-176 16-49 (175)
276 COG1752 RssA Predicted esteras 63.7 10 0.00022 31.5 3.8 33 144-176 28-60 (306)
277 PF00326 Peptidase_S9: Prolyl 63.4 55 0.0012 25.2 7.7 65 82-151 143-208 (213)
278 cd07227 Pat_Fungal_NTE1 Fungal 62.9 13 0.00029 30.1 4.2 34 143-176 26-59 (269)
279 smart00827 PKS_AT Acyl transfe 62.6 11 0.00023 31.1 3.8 31 144-174 71-101 (298)
280 cd07209 Pat_hypo_Ecoli_Z1214_l 62.5 14 0.00031 28.8 4.2 34 144-177 15-48 (215)
281 cd01714 ETF_beta The electron 61.9 72 0.0016 24.6 8.6 71 104-185 68-145 (202)
282 PF00698 Acyl_transf_1: Acyl t 61.3 6.8 0.00015 32.7 2.4 31 144-174 73-103 (318)
283 TIGR03707 PPK2_P_aer polyphosp 61.0 11 0.00024 29.7 3.3 40 82-121 29-68 (230)
284 PF10605 3HBOH: 3HB-oligomer h 60.8 9.1 0.0002 34.5 3.0 33 157-189 287-321 (690)
285 KOG1252 Cystathionine beta-syn 60.4 1E+02 0.0022 25.9 8.8 38 82-122 210-249 (362)
286 COG1087 GalE UDP-glucose 4-epi 60.3 92 0.002 25.9 8.2 89 100-188 12-119 (329)
287 cd07224 Pat_like Patatin-like 60.1 15 0.00032 29.1 4.0 34 143-176 15-50 (233)
288 TIGR03131 malonate_mdcH malona 60.1 13 0.00028 30.6 3.8 30 145-174 66-95 (295)
289 PF02502 LacAB_rpiB: Ribose/Ga 58.6 66 0.0014 23.1 8.5 75 101-187 14-88 (140)
290 cd07230 Pat_TGL4-5_like Triacy 58.5 12 0.00026 32.6 3.4 35 143-177 89-123 (421)
291 COG3494 Uncharacterized protei 57.5 71 0.0015 25.6 7.0 60 101-162 17-77 (279)
292 PRK00652 lpxK tetraacyldisacch 57.1 1.2E+02 0.0026 25.6 8.9 28 99-127 66-93 (325)
293 cd07208 Pat_hypo_Ecoli_yjju_li 56.2 21 0.00045 28.9 4.3 35 143-177 14-49 (266)
294 PF03976 PPK2: Polyphosphate k 55.4 5.5 0.00012 31.4 0.8 40 82-121 29-68 (228)
295 KOG0635 Adenosine 5'-phosphosu 55.1 37 0.0008 24.7 4.7 40 82-121 29-68 (207)
296 PF03205 MobB: Molybdopterin g 53.9 22 0.00047 25.5 3.6 43 85-127 1-43 (140)
297 TIGR00128 fabD malonyl CoA-acy 53.8 17 0.00038 29.6 3.6 29 147-175 74-103 (290)
298 PF01656 CbiA: CobQ/CobB/MinD/ 52.9 17 0.00036 27.5 3.2 35 87-121 2-36 (195)
299 cd07232 Pat_PLPL Patain-like p 52.3 17 0.00037 31.6 3.3 36 143-178 83-118 (407)
300 cd07229 Pat_TGL3_like Triacylg 52.2 17 0.00037 31.3 3.2 35 143-177 99-133 (391)
301 TIGR00689 rpiB_lacA_lacB sugar 52.1 89 0.0019 22.6 8.7 75 101-187 13-87 (144)
302 cd04951 GT1_WbdM_like This fam 52.1 1.2E+02 0.0025 25.3 8.5 38 85-122 2-39 (360)
303 TIGR02069 cyanophycinase cyano 51.8 46 0.001 26.7 5.5 40 81-121 26-66 (250)
304 cd01983 Fer4_NifH The Fer4_Nif 50.1 29 0.00063 22.2 3.7 33 87-119 2-34 (99)
305 COG3727 Vsr DNA G:T-mismatch r 49.8 59 0.0013 23.0 4.9 37 82-118 56-114 (150)
306 COG0031 CysK Cysteine synthase 49.4 1.5E+02 0.0033 24.6 9.9 97 85-187 170-291 (300)
307 cd07204 Pat_PNPLA_like Patatin 49.4 28 0.00061 27.8 4.0 34 144-177 16-53 (243)
308 TIGR01425 SRP54_euk signal rec 49.3 91 0.002 27.4 7.2 70 105-185 175-247 (429)
309 KOG1209 1-Acyl dihydroxyaceton 49.2 38 0.00083 26.4 4.3 38 81-121 4-41 (289)
310 PF10686 DUF2493: Protein of u 49.0 44 0.00095 20.7 3.9 33 82-118 30-63 (71)
311 COG4088 Predicted nucleotide k 48.9 1.3E+02 0.0028 23.6 7.4 36 85-120 2-37 (261)
312 COG1763 MobB Molybdopterin-gua 48.1 46 0.001 24.6 4.6 41 84-124 2-42 (161)
313 PRK07933 thymidylate kinase; V 47.9 46 0.001 25.9 4.9 41 86-126 2-42 (213)
314 PF05673 DUF815: Protein of un 47.8 1.1E+02 0.0024 24.5 6.8 61 83-160 51-111 (249)
315 cd07206 Pat_TGL3-4-5_SDP1 Tria 47.1 34 0.00073 28.3 4.1 33 144-176 86-118 (298)
316 cd07231 Pat_SDP1-like Sugar-De 46.7 34 0.00074 28.5 4.1 34 143-176 84-117 (323)
317 PF08484 Methyltransf_14: C-me 46.7 93 0.002 23.0 6.0 48 139-187 54-102 (160)
318 COG3007 Uncharacterized paraqu 46.3 1.6E+02 0.0035 24.3 7.5 52 139-190 21-80 (398)
319 PRK14974 cell division protein 46.1 1.9E+02 0.004 24.6 8.5 66 109-185 219-287 (336)
320 PF03853 YjeF_N: YjeF-related 45.8 30 0.00065 25.8 3.4 37 80-118 22-58 (169)
321 PRK08622 galactose-6-phosphate 45.5 1.3E+02 0.0028 22.6 8.7 76 100-187 14-89 (171)
322 cd07220 Pat_PNPLA2 Patatin-lik 45.4 39 0.00084 27.1 4.2 34 144-177 21-58 (249)
323 COG0218 Predicted GTPase [Gene 45.3 56 0.0012 25.1 4.7 57 248-307 134-198 (200)
324 cd07222 Pat_PNPLA4 Patatin-lik 45.2 30 0.00064 27.7 3.5 31 144-174 16-50 (246)
325 PRK00889 adenylylsulfate kinas 45.0 48 0.001 24.6 4.5 38 83-120 3-40 (175)
326 cd01819 Patatin_and_cPLA2 Pata 44.7 40 0.00087 24.6 3.9 30 144-173 15-46 (155)
327 PF03575 Peptidase_S51: Peptid 44.4 52 0.0011 23.9 4.5 22 101-122 2-23 (154)
328 KOG0781 Signal recognition par 44.3 1.7E+02 0.0036 26.2 7.8 86 88-185 443-538 (587)
329 PRK14729 miaA tRNA delta(2)-is 44.0 1.9E+02 0.0041 24.1 8.4 74 85-163 5-101 (300)
330 TIGR01119 lacB galactose-6-pho 43.9 1.4E+02 0.003 22.4 8.8 76 100-187 14-89 (171)
331 cd07212 Pat_PNPLA9 Patatin-lik 43.4 21 0.00045 29.7 2.5 19 158-176 35-53 (312)
332 PRK06696 uridine kinase; Valid 43.2 58 0.0012 25.5 4.8 39 81-119 19-57 (223)
333 cd01521 RHOD_PspE2 Member of t 43.1 85 0.0018 21.1 5.1 34 81-118 63-96 (110)
334 TIGR01120 rpiB ribose 5-phosph 43.0 1.3E+02 0.0028 21.8 8.8 75 101-187 14-88 (143)
335 PRK05579 bifunctional phosphop 42.9 2.3E+02 0.005 24.7 9.5 36 84-119 117-153 (399)
336 TIGR02873 spore_ylxY probable 42.7 30 0.00065 28.1 3.2 34 84-119 231-264 (268)
337 TIGR02884 spore_pdaA delta-lac 42.6 36 0.00078 26.7 3.6 35 83-119 186-221 (224)
338 cd07218 Pat_iPLA2 Calcium-inde 42.4 37 0.00081 27.1 3.7 33 145-177 18-52 (245)
339 TIGR02764 spore_ybaN_pdaB poly 42.0 24 0.00052 26.8 2.5 36 84-119 152-188 (191)
340 TIGR00455 apsK adenylylsulfate 41.7 1.5E+02 0.0032 22.2 7.5 39 82-120 16-54 (184)
341 COG1225 Bcp Peroxiredoxin [Pos 41.7 1.4E+02 0.0031 22.0 6.6 58 61-120 11-72 (157)
342 cd02037 MRP-like MRP (Multiple 41.6 52 0.0011 24.3 4.2 39 86-124 2-40 (169)
343 cd07221 Pat_PNPLA3 Patatin-lik 41.3 41 0.0009 27.0 3.8 21 157-177 34-54 (252)
344 TIGR00365 monothiol glutaredox 41.3 1E+02 0.0023 20.3 8.4 81 82-178 11-92 (97)
345 TIGR00089 RNA modification enz 41.0 2.5E+02 0.0053 24.7 8.8 93 87-183 2-97 (429)
346 PF04084 ORC2: Origin recognit 41.0 2.2E+02 0.0048 24.0 8.7 47 139-185 120-175 (326)
347 cd02036 MinD Bacterial cell di 40.9 44 0.00096 24.7 3.8 35 87-121 3-37 (179)
348 PLN02748 tRNA dimethylallyltra 40.8 2.1E+02 0.0045 25.6 8.1 77 82-163 20-120 (468)
349 PF13207 AAA_17: AAA domain; P 40.6 54 0.0012 22.4 3.9 31 86-120 1-32 (121)
350 CHL00175 minD septum-site dete 40.4 62 0.0014 26.3 4.8 39 83-121 15-53 (281)
351 PRK13230 nitrogenase reductase 40.2 46 0.00099 27.1 4.0 41 85-126 3-43 (279)
352 PRK14331 (dimethylallyl)adenos 39.9 2.6E+02 0.0056 24.7 8.8 94 87-184 3-101 (437)
353 COG1506 DAP2 Dipeptidyl aminop 39.2 1.5E+02 0.0032 27.7 7.4 63 82-151 550-615 (620)
354 KOG2805 tRNA (5-methylaminomet 38.9 72 0.0016 26.4 4.6 62 82-149 5-66 (377)
355 cd03145 GAT1_cyanophycinase Ty 38.9 1.9E+02 0.004 22.6 7.0 39 82-121 28-67 (217)
356 PLN02733 phosphatidylcholine-s 38.7 23 0.00049 31.2 2.1 51 254-307 371-421 (440)
357 cd02034 CooC The accessory pro 38.6 56 0.0012 22.5 3.6 35 87-121 2-36 (116)
358 PRK12615 galactose-6-phosphate 38.4 1.7E+02 0.0037 21.9 8.6 75 101-187 15-89 (171)
359 PRK03846 adenylylsulfate kinas 38.2 62 0.0013 24.7 4.2 38 82-119 22-59 (198)
360 TIGR01425 SRP54_euk signal rec 38.1 58 0.0013 28.6 4.4 39 82-120 98-136 (429)
361 TIGR03371 cellulose_yhjQ cellu 38.1 52 0.0011 26.0 4.0 40 85-124 3-42 (246)
362 PRK10751 molybdopterin-guanine 37.9 73 0.0016 23.9 4.4 44 82-125 4-47 (173)
363 TIGR00176 mobB molybdopterin-g 37.8 57 0.0012 23.9 3.8 38 87-124 2-39 (155)
364 TIGR03018 pepcterm_TyrKin exop 37.7 88 0.0019 24.1 5.1 41 82-122 34-75 (207)
365 cd07211 Pat_PNPLA8 Patatin-lik 37.5 37 0.00081 28.2 3.1 17 158-174 44-60 (308)
366 COG0489 Mrp ATPases involved i 37.5 93 0.002 25.3 5.3 47 82-128 56-102 (265)
367 COG1832 Predicted CoA-binding 37.3 98 0.0021 22.2 4.6 34 87-121 19-52 (140)
368 cd03146 GAT1_Peptidase_E Type 37.2 1.4E+02 0.0029 23.3 6.0 40 82-122 30-70 (212)
369 TIGR01007 eps_fam capsular exo 36.2 74 0.0016 24.4 4.4 38 84-121 18-55 (204)
370 PRK14340 (dimethylallyl)adenos 36.1 3.1E+02 0.0068 24.3 9.1 93 87-183 9-106 (445)
371 COG0552 FtsY Signal recognitio 36.0 2.7E+02 0.0059 23.6 8.3 85 92-185 202-292 (340)
372 PLN02412 probable glutathione 35.8 1.8E+02 0.0039 21.5 6.4 61 61-123 10-73 (167)
373 cd02033 BchX Chlorophyllide re 35.6 76 0.0017 26.7 4.6 39 83-121 30-68 (329)
374 PF03721 UDPG_MGDP_dh_N: UDP-g 35.6 68 0.0015 24.3 4.0 29 88-121 4-32 (185)
375 PRK10824 glutaredoxin-4; Provi 35.5 1.5E+02 0.0033 20.5 9.4 81 82-178 14-95 (115)
376 TIGR03127 RuMP_HxlB 6-phospho 35.4 1.5E+02 0.0032 22.2 5.8 32 86-119 32-63 (179)
377 PRK13256 thiopurine S-methyltr 35.1 35 0.00076 26.9 2.4 29 86-121 46-74 (226)
378 PRK12724 flagellar biosynthesi 35.1 3.2E+02 0.0069 24.2 9.5 75 103-185 290-367 (432)
379 PRK14325 (dimethylallyl)adenos 35.1 3.2E+02 0.007 24.2 8.8 93 87-183 6-103 (444)
380 PRK14337 (dimethylallyl)adenos 34.8 3.3E+02 0.0071 24.2 9.0 94 87-185 6-104 (446)
381 COG0331 FabD (acyl-carrier-pro 34.7 46 0.00099 27.7 3.1 22 153-174 83-104 (310)
382 PF01734 Patatin: Patatin-like 34.7 55 0.0012 24.3 3.5 20 157-176 29-48 (204)
383 TIGR03708 poly_P_AMP_trns poly 34.7 58 0.0013 29.1 3.9 42 81-122 37-78 (493)
384 COG4425 Predicted membrane pro 34.6 1.4E+02 0.0031 26.2 5.9 38 153-190 395-436 (588)
385 TIGR00959 ffh signal recogniti 34.4 3.3E+02 0.0071 24.1 8.8 70 105-185 175-247 (428)
386 COG0621 MiaB 2-methylthioadeni 34.4 3.3E+02 0.0072 24.1 8.3 85 87-183 5-99 (437)
387 TIGR01969 minD_arch cell divis 33.4 78 0.0017 25.1 4.3 37 86-122 3-39 (251)
388 COG0084 TatD Mg-dependent DNas 33.4 1.2E+02 0.0027 24.4 5.3 53 137-189 14-67 (256)
389 TIGR01968 minD_bact septum sit 33.2 83 0.0018 25.1 4.5 38 85-122 3-40 (261)
390 PLN03050 pyridoxine (pyridoxam 33.2 96 0.0021 24.9 4.6 34 84-119 61-94 (246)
391 COG1856 Uncharacterized homolo 33.0 1.6E+02 0.0034 23.2 5.4 93 84-185 88-186 (275)
392 PRK07667 uridine kinase; Provi 32.9 94 0.002 23.7 4.5 42 82-123 15-56 (193)
393 PF05724 TPMT: Thiopurine S-me 32.7 1.1E+02 0.0024 23.9 4.8 33 82-121 36-68 (218)
394 TIGR03029 EpsG chain length de 32.5 1.1E+02 0.0023 24.9 5.0 40 82-121 102-141 (274)
395 PTZ00056 glutathione peroxidas 32.5 1.8E+02 0.0039 22.4 5.9 60 61-122 20-82 (199)
396 PLN02924 thymidylate kinase 32.3 1E+02 0.0022 24.2 4.6 41 82-122 14-54 (220)
397 COG1255 Uncharacterized protei 32.2 59 0.0013 22.4 2.8 22 100-121 24-45 (129)
398 PRK01906 tetraacyldisaccharide 32.1 3.2E+02 0.0069 23.2 8.1 43 85-128 57-101 (338)
399 COG0552 FtsY Signal recognitio 31.9 1.2E+02 0.0025 25.6 4.9 72 81-169 136-207 (340)
400 TIGR00521 coaBC_dfp phosphopan 31.6 3.5E+02 0.0076 23.6 9.3 36 84-119 113-149 (390)
401 PRK05571 ribose-5-phosphate is 31.6 2.1E+02 0.0045 20.9 8.7 75 101-187 15-90 (148)
402 PF01118 Semialdhyde_dh: Semia 31.5 49 0.0011 22.9 2.5 33 156-188 1-34 (121)
403 PF11713 Peptidase_C80: Peptid 31.2 21 0.00046 26.2 0.6 15 153-167 102-116 (157)
404 PF14253 AbiH: Bacteriophage a 31.1 27 0.00059 28.2 1.3 17 153-169 233-249 (270)
405 TIGR02026 BchE magnesium-proto 31.1 2.3E+02 0.005 25.5 7.2 23 102-124 26-49 (497)
406 KOG0855 Alkyl hydroperoxide re 31.0 2E+02 0.0043 21.4 5.4 59 61-120 70-132 (211)
407 cd02038 FleN-like FleN is a me 31.0 1.1E+02 0.0024 21.7 4.4 38 86-123 2-39 (139)
408 PRK06171 sorbitol-6-phosphate 31.0 2.3E+02 0.005 22.6 6.7 33 86-122 11-43 (266)
409 PLN02204 diacylglycerol kinase 30.9 3.8E+02 0.0083 24.9 8.3 35 82-116 159-194 (601)
410 cd02042 ParA ParA and ParB of 30.4 93 0.002 20.5 3.7 30 92-121 8-37 (104)
411 COG3580 Uncharacterized protei 30.4 3.1E+02 0.0067 22.9 6.9 38 85-122 203-240 (351)
412 PF02230 Abhydrolase_2: Phosph 30.3 2.2E+02 0.0047 22.0 6.2 44 83-126 155-199 (216)
413 cd07213 Pat17_PNPLA8_PNPLA9_li 30.3 79 0.0017 26.0 3.9 19 158-176 37-55 (288)
414 cd03409 Chelatase_Class_II Cla 30.3 1.6E+02 0.0035 19.2 6.9 27 85-111 2-29 (101)
415 TIGR02540 gpx7 putative glutat 30.2 2.1E+02 0.0046 20.6 8.2 63 63-127 5-70 (153)
416 PF01738 DLH: Dienelactone hyd 30.2 2.6E+02 0.0056 21.5 6.8 68 83-150 145-215 (218)
417 PF12000 Glyco_trans_4_3: Gkyc 30.1 2.4E+02 0.0052 21.2 6.0 72 111-183 19-93 (171)
418 PRK06731 flhF flagellar biosyn 30.1 3.1E+02 0.0067 22.4 9.6 70 105-185 146-219 (270)
419 PTZ00256 glutathione peroxidas 29.9 2.4E+02 0.0053 21.2 6.4 58 61-121 21-83 (183)
420 PRK13512 coenzyme A disulfide 29.7 2E+02 0.0043 25.4 6.5 45 139-186 133-178 (438)
421 COG0505 CarA Carbamoylphosphat 29.7 1.8E+02 0.004 24.7 5.7 65 102-173 191-267 (368)
422 PRK09936 hypothetical protein; 29.7 2E+02 0.0042 23.8 5.7 29 99-127 38-66 (296)
423 PRK09437 bcp thioredoxin-depen 29.5 2.2E+02 0.0047 20.5 6.0 58 61-120 11-72 (154)
424 PRK00923 sirohydrochlorin coba 29.4 2E+02 0.0043 20.0 5.9 28 84-111 3-30 (126)
425 PRK10867 signal recognition pa 29.3 4.1E+02 0.0088 23.6 9.9 68 106-184 177-247 (433)
426 PRK13768 GTPase; Provisional 29.3 85 0.0018 25.2 3.8 36 85-120 3-38 (253)
427 PRK13869 plasmid-partitioning 29.3 1.2E+02 0.0025 26.6 4.9 41 84-124 122-162 (405)
428 cd03416 CbiX_SirB_N Sirohydroc 29.2 1.7E+02 0.0037 19.2 5.8 27 85-111 2-28 (101)
429 PF00578 AhpC-TSA: AhpC/TSA fa 28.9 1.1E+02 0.0024 20.7 4.1 58 61-120 6-67 (124)
430 COG0300 DltE Short-chain dehyd 28.9 3.2E+02 0.007 22.3 7.0 32 86-121 8-39 (265)
431 TIGR00632 vsr DNA mismatch end 28.8 2E+02 0.0044 20.0 5.0 15 104-118 99-113 (117)
432 TIGR00064 ftsY signal recognit 28.7 3.2E+02 0.007 22.3 8.0 70 108-185 150-225 (272)
433 PTZ00062 glutaredoxin; Provisi 28.6 2.8E+02 0.0061 21.5 8.3 83 82-180 112-195 (204)
434 cd02032 Bchl_like This family 28.3 87 0.0019 25.3 3.8 34 91-124 7-40 (267)
435 COG4221 Short-chain alcohol de 28.3 2.1E+02 0.0046 22.9 5.6 33 85-121 7-39 (246)
436 COG0426 FpaA Uncharacterized f 28.2 3.9E+02 0.0085 23.2 7.5 73 84-178 249-330 (388)
437 PRK00091 miaA tRNA delta(2)-is 28.2 3.2E+02 0.007 22.8 7.0 34 83-120 3-37 (307)
438 PF05577 Peptidase_S28: Serine 28.1 62 0.0013 28.4 3.1 38 250-290 377-414 (434)
439 KOG1200 Mitochondrial/plastidi 27.9 2.9E+02 0.0063 21.5 7.1 32 86-121 16-47 (256)
440 PF14606 Lipase_GDSL_3: GDSL-l 27.8 2.5E+02 0.0055 21.2 5.7 25 136-160 74-99 (178)
441 PRK00726 murG undecaprenyldiph 27.8 3.7E+02 0.008 22.6 9.5 36 85-122 4-39 (357)
442 cd07219 Pat_PNPLA1 Patatin-lik 27.8 96 0.0021 26.7 3.9 18 158-175 47-64 (382)
443 cd03413 CbiK_C Anaerobic cobal 27.7 1.9E+02 0.0042 19.4 7.2 60 84-160 2-62 (103)
444 PTZ00445 p36-lilke protein; Pr 27.6 3E+02 0.0066 21.6 6.2 65 100-165 30-102 (219)
445 PF02606 LpxK: Tetraacyldisacc 27.5 1.2E+02 0.0025 25.6 4.4 44 85-129 36-81 (326)
446 PF08433 KTI12: Chromatin asso 27.5 76 0.0016 25.9 3.2 40 85-124 2-41 (270)
447 PRK00771 signal recognition pa 27.4 1.2E+02 0.0025 26.9 4.5 40 82-121 93-132 (437)
448 TIGR03453 partition_RepA plasm 27.4 1.2E+02 0.0027 26.2 4.7 41 84-124 105-145 (387)
449 TIGR01287 nifH nitrogenase iro 27.3 1.2E+02 0.0027 24.5 4.5 37 90-126 6-42 (275)
450 PF10566 Glyco_hydro_97: Glyco 27.3 3.1E+02 0.0067 22.5 6.5 66 99-165 32-97 (273)
451 COG5441 Uncharacterized conser 27.2 3.7E+02 0.008 22.4 9.2 93 85-178 3-116 (401)
452 TIGR01574 miaB-methiolase tRNA 27.2 4.4E+02 0.0096 23.3 8.8 93 87-183 2-100 (438)
453 PLN02840 tRNA dimethylallyltra 27.1 4.4E+02 0.0095 23.3 7.9 76 82-162 19-118 (421)
454 cd07217 Pat17_PNPLA8_PNPLA9_li 26.9 56 0.0012 27.7 2.5 18 158-175 44-61 (344)
455 PF03033 Glyco_transf_28: Glyc 26.9 47 0.001 23.3 1.8 34 86-121 2-35 (139)
456 cd03785 GT1_MurG MurG is an N- 26.7 85 0.0018 26.3 3.6 34 87-120 2-35 (350)
457 PHA02518 ParA-like protein; Pr 26.5 1.6E+02 0.0036 22.4 5.0 39 86-124 3-41 (211)
458 cd02040 NifH NifH gene encodes 26.4 1.3E+02 0.0029 24.1 4.6 40 86-126 4-43 (270)
459 PRK13973 thymidylate kinase; P 26.4 1.5E+02 0.0033 23.0 4.7 38 85-122 4-41 (213)
460 PRK13236 nitrogenase reductase 26.3 1.3E+02 0.0028 24.8 4.5 42 86-127 8-49 (296)
461 TIGR02016 BchX chlorophyllide 26.2 1.1E+02 0.0023 25.4 4.0 33 91-123 7-39 (296)
462 PRK10416 signal recognition pa 26.1 4E+02 0.0086 22.4 8.4 68 110-185 194-267 (318)
463 PRK09072 short chain dehydroge 26.1 1.2E+02 0.0026 24.2 4.2 32 86-121 7-38 (263)
464 COG0278 Glutaredoxin-related p 26.1 2.1E+02 0.0046 19.3 4.5 73 82-170 14-88 (105)
465 KOG2872 Uroporphyrinogen decar 26.1 61 0.0013 26.5 2.3 31 82-121 251-281 (359)
466 cd01520 RHOD_YbbB Member of th 25.9 1.6E+02 0.0035 20.5 4.4 34 81-119 85-118 (128)
467 cd03557 L-arabinose_isomerase 25.9 5E+02 0.011 23.5 11.4 62 133-194 16-82 (484)
468 cd02027 APSK Adenosine 5'-phos 25.9 92 0.002 22.5 3.2 34 86-119 1-34 (149)
469 PRK14457 ribosomal RNA large s 25.8 4.2E+02 0.0091 22.6 8.4 75 86-170 260-334 (345)
470 PHA02519 plasmid partition pro 25.6 1.9E+02 0.004 25.2 5.4 42 84-125 106-149 (387)
471 PRK14333 (dimethylallyl)adenos 25.6 4.8E+02 0.01 23.2 8.5 94 86-183 8-106 (448)
472 PRK10867 signal recognition pa 25.6 1.2E+02 0.0025 26.8 4.2 40 82-121 98-138 (433)
473 PRK14329 (dimethylallyl)adenos 25.5 4.9E+02 0.011 23.3 8.6 95 87-185 26-125 (467)
474 PRK13255 thiopurine S-methyltr 25.4 83 0.0018 24.6 3.0 16 106-121 53-68 (218)
475 PRK05541 adenylylsulfate kinas 25.3 1.1E+02 0.0024 22.6 3.7 38 82-119 5-42 (176)
476 TIGR01281 DPOR_bchL light-inde 25.0 1.2E+02 0.0025 24.5 4.0 34 91-124 7-40 (268)
477 TIGR03708 poly_P_AMP_trns poly 25.0 93 0.002 27.9 3.5 41 81-121 296-336 (493)
478 COG3887 Predicted signaling pr 25.0 2.1E+02 0.0046 26.3 5.6 50 137-187 321-376 (655)
479 cd02117 NifH_like This family 25.0 1.5E+02 0.0033 22.8 4.5 36 91-126 7-42 (212)
480 COG3946 VirJ Type IV secretory 25.0 2.1E+02 0.0045 25.0 5.3 103 82-187 47-155 (456)
481 KOG1201 Hydroxysteroid 17-beta 24.9 1.5E+02 0.0033 24.5 4.4 36 85-124 39-74 (300)
482 PRK12828 short chain dehydroge 24.8 1.3E+02 0.0028 23.4 4.2 31 86-120 9-39 (239)
483 PRK14494 putative molybdopteri 24.6 1.5E+02 0.0033 23.5 4.3 41 86-126 3-43 (229)
484 PRK11613 folP dihydropteroate 24.5 4.1E+02 0.0088 21.9 7.8 59 101-169 165-225 (282)
485 PRK08177 short chain dehydroge 24.4 1.4E+02 0.0031 23.1 4.3 32 87-122 4-35 (225)
486 COG4874 Uncharacterized protei 24.4 1.8E+02 0.004 23.1 4.5 28 100-127 58-85 (318)
487 cd05005 SIS_PHI Hexulose-6-pho 24.4 3E+02 0.0066 20.5 6.4 80 87-169 36-117 (179)
488 cd03129 GAT1_Peptidase_E_like 24.1 3.4E+02 0.0074 20.9 7.4 39 82-121 28-66 (210)
489 TIGR00682 lpxK tetraacyldisacc 24.0 1.6E+02 0.0034 24.7 4.5 43 85-128 29-73 (311)
490 TIGR02816 pfaB_fam PfaB family 24.0 1E+02 0.0022 28.1 3.6 25 152-176 262-286 (538)
491 TIGR03815 CpaE_hom_Actino heli 23.8 2.2E+02 0.0049 23.7 5.5 44 82-125 92-135 (322)
492 PRK13705 plasmid-partitioning 23.8 1.8E+02 0.0038 25.3 5.0 41 85-125 108-149 (388)
493 cd02035 ArsA ArsA ATPase funct 23.8 95 0.0021 24.2 3.1 34 87-120 2-35 (217)
494 PF09419 PGP_phosphatase: Mito 23.7 3E+02 0.0065 20.6 5.5 53 107-165 35-88 (168)
495 PF06500 DUF1100: Alpha/beta h 23.6 1.3E+02 0.0027 26.3 4.0 59 249-308 189-255 (411)
496 PRK14495 putative molybdopteri 23.5 2.4E+02 0.0052 25.0 5.5 41 86-126 3-43 (452)
497 COG4213 XylF ABC-type xylose t 23.5 4.5E+02 0.0097 22.1 7.0 78 82-163 80-161 (341)
498 PF00004 AAA: ATPase family as 23.2 2.5E+02 0.0054 19.1 7.3 55 87-151 1-55 (132)
499 KOG2214 Predicted esterase of 23.1 50 0.0011 29.3 1.5 40 144-183 191-231 (543)
500 PRK15482 transcriptional regul 23.0 1.2E+02 0.0026 24.8 3.7 80 87-169 138-224 (285)
No 1
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=204.37 Aligned_cols=250 Identities=65% Similarity=1.100 Sum_probs=229.8
Q ss_pred eeEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhH
Q 021050 60 QQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA 139 (318)
Q Consensus 60 ~~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~ 139 (318)
.+.+.|++..+.++.+.+++.++..++|++||+-++........++..|++.|+.++.+|++|.|+|++......+...+
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~ea 89 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEA 89 (269)
T ss_pred eeEEEeccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchH
Confidence 37889999999999998999999999999999999998777888999999999999999999999999998888888899
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCC
Q 021050 140 DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKT 219 (318)
Q Consensus 140 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (318)
+|+..+++++.....---+++|||-||.+++.+|.++++++-+|.+++.++....+.+++++.+..++...++.+...+.
T Consensus 90 dDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rk 169 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRK 169 (269)
T ss_pred HHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCccc
Confidence 99999999997543222378999999999999999999999999999999999999899999999999999999999999
Q ss_pred CcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHH
Q 021050 220 GDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVS 299 (318)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 299 (318)
+...+.++.+.+.+++..+.......++.+||+|-+||..|.+||.+.+.++++.+++.++.++||++|.+..+..+...
T Consensus 170 G~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~~ 249 (269)
T KOG4667|consen 170 GKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLVS 249 (269)
T ss_pred CCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhhHhh
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHhhc
Q 021050 300 VVLDFVKASL 309 (318)
Q Consensus 300 ~i~~fl~~~~ 309 (318)
..+.|.+-..
T Consensus 250 lgl~f~k~r~ 259 (269)
T KOG4667|consen 250 LGLEFIKTRI 259 (269)
T ss_pred hcceeEEeee
Confidence 8787776444
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.5e-31 Score=222.75 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=169.6
Q ss_pred ceeEEEEeCCCCcEEEEEEecC---CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA---ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGN 134 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~ 134 (318)
..++..+.+.+|.++.+..+.+ .++++|||+||++++.. .+|..+++.|+++||+|+++|+||||.|++... ..+
T Consensus 60 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 60 KTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred ceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCC
Confidence 3455566678999999887754 25689999999998763 356889999999999999999999999987543 247
Q ss_pred hhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhh-hhhHHH---HHH
Q 021050 135 YWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED-RLGKDY---MEK 206 (318)
Q Consensus 135 ~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-~~~~~~---~~~ 206 (318)
+..+++|+.++++.+... ...+++|+||||||++++.++.++|+ ++++|+++|.......... ...... ...
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHH
Confidence 788899999999988643 23479999999999999999999999 9999999986543221100 000000 111
Q ss_pred HhccC-CccccCCCC---------------cceee--echHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchh
Q 021050 207 IMQDG-FIDVKNKTG---------------DVEYR--VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDA 268 (318)
Q Consensus 207 ~~~~~-~~~~~~~~~---------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~ 268 (318)
..... ......... ...+. .........+...........++++|+|+++|++|.++|++.+
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~ 298 (349)
T PLN02385 219 LLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVS 298 (349)
T ss_pred HCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHH
Confidence 10000 000000000 00000 0000011111100000111226799999999999999999999
Q ss_pred HHHHhhC--CCCEEEEECCCCccCC-CChHH----HHHHHHHHHHhhcC
Q 021050 269 HEFDKII--PNHKLHVVEGANHGYT-NHQAE----LVSVVLDFVKASLK 310 (318)
Q Consensus 269 ~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~----~~~~i~~fl~~~~~ 310 (318)
+.+++.+ +++++++++++||.++ +++++ +.+.|.+||++++.
T Consensus 299 ~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 299 KFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9998887 4689999999999976 55654 78889999998764
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.4e-30 Score=216.93 Aligned_cols=251 Identities=14% Similarity=0.188 Sum_probs=169.0
Q ss_pred eEEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCCh
Q 021050 61 QELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNY 135 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~ 135 (318)
+...+.+.||.++.+..+.+ ..+++||++||++.+.. +.+..+++.|+++||+|+++|+||||.|.+... ..++
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~-~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 111 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS-WTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNV 111 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcc-eehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCH
Confidence 56677778999999876643 24678999999987652 457788889999999999999999999975433 3467
Q ss_pred hhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhh-hH---HHHHHH
Q 021050 136 WREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRL-GK---DYMEKI 207 (318)
Q Consensus 136 ~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~-~~---~~~~~~ 207 (318)
...++|+.++++++... ...+++|+||||||.+++.++.++|+ |+++|++++............ .. .....+
T Consensus 112 ~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PLN02298 112 DLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARF 191 (330)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHH
Confidence 78899999999999764 23479999999999999999999998 999999998754432211000 00 111111
Q ss_pred hccCCc-cccCCCCc---------------ceee--echHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhH
Q 021050 208 MQDGFI-DVKNKTGD---------------VEYR--VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAH 269 (318)
Q Consensus 208 ~~~~~~-~~~~~~~~---------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~ 269 (318)
...... ........ ..+. .........+...........++++|+|+++|++|.++|++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~ 271 (330)
T PLN02298 192 LPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSR 271 (330)
T ss_pred CCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHH
Confidence 111000 00000000 0000 00000000000000001112267899999999999999999999
Q ss_pred HHHhhCC--CCEEEEECCCCccCC-CCh----HHHHHHHHHHHHhhcCCC
Q 021050 270 EFDKIIP--NHKLHVVEGANHGYT-NHQ----AELVSVVLDFVKASLKQD 312 (318)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~gH~~~-~~~----~~~~~~i~~fl~~~~~~~ 312 (318)
.+++.++ +++++++++++|.++ +++ +++.+.|.+||.+.+...
T Consensus 272 ~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 272 ALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred HHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 9988764 689999999999975 454 357888999999987544
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=2.2e-30 Score=210.72 Aligned_cols=241 Identities=16% Similarity=0.198 Sum_probs=162.1
Q ss_pred eCCCCcEEEEEEecCC--CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCCChhhhHHHH
Q 021050 66 PNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDL 142 (318)
Q Consensus 66 ~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~~~~~~~~d~ 142 (318)
.+.||..|.+.++.++ +.+.|+++||++++. ..|..+++.|+++||+|+++|+||||.|.+.. ...++...++|+
T Consensus 6 ~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~--~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~ 83 (276)
T PHA02857 6 FNLDNDYIYCKYWKPITYPKALVFISHGAGEHS--GRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83 (276)
T ss_pred ecCCCCEEEEEeccCCCCCCEEEEEeCCCcccc--chHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHH
Confidence 4469999999887663 567788889999888 56999999999999999999999999998643 234666778888
Q ss_pred HHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchh-hhhhhHHHHHHHhccCCccccC--
Q 021050 143 RAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI-EDRLGKDYMEKIMQDGFIDVKN-- 217 (318)
Q Consensus 143 ~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 217 (318)
...++.++.. ...+++|+||||||.+|+.+|.++|+ ++++|+++|........ ...+..................
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPE 163 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHh
Confidence 8888877544 34579999999999999999999998 99999999865432110 0000000011111000000000
Q ss_pred ---CC---------Ccce--eeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC-CCCEEEE
Q 021050 218 ---KT---------GDVE--YRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII-PNHKLHV 282 (318)
Q Consensus 218 ---~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~ 282 (318)
.. .... .......................++++|+|+++|++|.++|++.++.+.+.+ +++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~ 243 (276)
T PHA02857 164 SVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKI 243 (276)
T ss_pred hccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEE
Confidence 00 0000 0000000000000000001112267999999999999999999999998877 4689999
Q ss_pred ECCCCccCCCC----hHHHHHHHHHHHHhh
Q 021050 283 VEGANHGYTNH----QAELVSVVLDFVKAS 308 (318)
Q Consensus 283 ~~~~gH~~~~~----~~~~~~~i~~fl~~~ 308 (318)
++++||.++.+ .+++.+.+.+||+++
T Consensus 244 ~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 244 YEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred eCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999997633 357899999999886
No 5
>PRK13604 luxD acyl transferase; Provisional
Probab=99.98 E-value=4.3e-30 Score=203.60 Aligned_cols=226 Identities=15% Similarity=0.201 Sum_probs=161.5
Q ss_pred EEEEeCCCCcEEEEEEecCC-----CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCccCCCh
Q 021050 62 ELVIPNKYGERLVGVLHDAE-----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSFQYGNY 135 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~-G~s~~~~~~~~~ 135 (318)
+..+.+.||.+|.+++..|+ +.++||++||++++. ..+..++++|+++||.|+.+|+||+ |+|++.....+.
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 44566789999999999874 458999999999987 4599999999999999999999987 999887655555
Q ss_pred hhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccc
Q 021050 136 WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDV 215 (318)
Q Consensus 136 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
.....|+.++++|++.++.+++.|+||||||.+|+.+|... .++++|+.+|..++...+.......+. .......
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~----~~p~~~l 163 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYL----SLPIDEL 163 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccc----cCccccc
Confidence 55689999999999988778999999999999997777643 499999999988866444332111100 0001111
Q ss_pred cCCCCcceeeec-hHHHHHhhccChH---HHhh-hccCCCcEEEEEcCCCCccCcchhHHHHhhCC--CCEEEEECCCCc
Q 021050 216 KNKTGDVEYRVT-EESLMDRLNTNMH---DACL-QIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP--NHKLHVVEGANH 288 (318)
Q Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~-~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH 288 (318)
..........+. ...+.+.+..++. .... ..+++.|+|+|||++|.+||++.++.+++.++ +++++++||++|
T Consensus 164 p~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H 243 (307)
T PRK13604 164 PEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSH 243 (307)
T ss_pred ccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcc
Confidence 010000011111 1222222222111 0111 11457999999999999999999999999875 699999999999
Q ss_pred cCCCCh
Q 021050 289 GYTNHQ 294 (318)
Q Consensus 289 ~~~~~~ 294 (318)
.+.++.
T Consensus 244 ~l~~~~ 249 (307)
T PRK13604 244 DLGENL 249 (307)
T ss_pred ccCcch
Confidence 998765
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=5.4e-30 Score=210.25 Aligned_cols=238 Identities=15% Similarity=0.170 Sum_probs=160.9
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-------cCC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-------QYG 133 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-------~~~ 133 (318)
+.+++ +|..+.+...++ ++++||++||++++. ..|..+.+.|+++ |+|+++|+||||.|+... ...
T Consensus 11 ~~~~~---~~~~i~y~~~G~-~~~~vlllHG~~~~~--~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 11 RTWRW---KGYNIRYQRAGT-SGPALVLVHGFGGNA--DHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred ceEEE---cCeEEEEEEcCC-CCCeEEEECCCCCCh--hHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccC
Confidence 44555 577777544432 458999999999999 5699999999887 799999999999998643 235
Q ss_pred ChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcccc-----chhhhh----hhH--
Q 021050 134 NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK-----GGIEDR----LGK-- 201 (318)
Q Consensus 134 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~-----~~~~~~----~~~-- 201 (318)
++.++++|+.++++.+ +.++++++||||||.+++.+|.++|+ |+++|++++..... ...... +..
T Consensus 84 ~~~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T PLN02824 84 TFETWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL 160 (294)
T ss_pred CHHHHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH
Confidence 7788899999999988 67889999999999999999999999 99999998754211 000000 000
Q ss_pred -------HHHH---------HHhccCCccccCCCCcc--------eeeechHHHHHhhccC--hHHHhhhccCCCcEEEE
Q 021050 202 -------DYME---------KIMQDGFIDVKNKTGDV--------EYRVTEESLMDRLNTN--MHDACLQIDMECSVLTI 255 (318)
Q Consensus 202 -------~~~~---------~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~lii 255 (318)
.+.. .+....+.......... ........+....... ........++++|+|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 240 (294)
T PLN02824 161 RETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIA 240 (294)
T ss_pred hchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEE
Confidence 0000 00000000000000000 0000000111111000 00011123679999999
Q ss_pred EcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CCChHHHHHHHHHHHHhh
Q 021050 256 HGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 308 (318)
+|++|..++.+.++.+.+..+++++++++++||+. .++++++.+.|.+|++++
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 241 WGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred EecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 99999999999998888888888999999999996 588899999999999763
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=3.9e-30 Score=211.75 Aligned_cols=242 Identities=19% Similarity=0.193 Sum_probs=159.7
Q ss_pred eEEEEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc--cCCChh
Q 021050 61 QELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYGNYW 136 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~--~~~~~~ 136 (318)
..+.+...+|.++...|...+ .+|+|||+||++++. ..|..+++.|.+.||+|+++|+||||.|..+. ...++.
T Consensus 22 ~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~ 99 (302)
T PRK00870 22 HYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYA 99 (302)
T ss_pred eeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHH
Confidence 567776555655444444433 578999999999888 56999999998889999999999999997653 235678
Q ss_pred hhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch-hhhhhh----------HHHH
Q 021050 137 READDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-IEDRLG----------KDYM 204 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~~----------~~~~ 204 (318)
.+++|+.++++.+ +.++++++||||||.+++.+|.++|+ |+++|++++....... ...... ....
T Consensus 100 ~~a~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (302)
T PRK00870 100 RHVEWMRSWFEQL---DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPV 176 (302)
T ss_pred HHHHHHHHHHHHc---CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhH
Confidence 8899999888877 67789999999999999999999998 9999999864321110 000000 0000
Q ss_pred HHHhccCCccccCCC--Ccc-------eeeechHHHHHhhc-----cChH----HHhhhccCCCcEEEEEcCCCCccCcc
Q 021050 205 EKIMQDGFIDVKNKT--GDV-------EYRVTEESLMDRLN-----TNMH----DACLQIDMECSVLTIHGSSDKIIPLQ 266 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~P~lii~g~~D~~~~~~ 266 (318)
............... ... .+............ .... ......++++|+++|+|++|.+++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 256 (302)
T PRK00870 177 GRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGG 256 (302)
T ss_pred HHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCc
Confidence 000000000000000 000 00000000000000 0000 00112367999999999999999976
Q ss_pred hhHHHHhhCCCCE---EEEECCCCccC-CCChHHHHHHHHHHHHhh
Q 021050 267 DAHEFDKIIPNHK---LHVVEGANHGY-TNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 267 ~~~~~~~~~~~~~---~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 308 (318)
. +.+.+.+++.+ +.+++++||+. .++++++.+.|.+||+++
T Consensus 257 ~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 257 D-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred h-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 6 88888888765 88999999997 478899999999999764
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=1.3e-29 Score=210.44 Aligned_cols=246 Identities=16% Similarity=0.199 Sum_probs=165.1
Q ss_pred eEEEEeCCCCcEEEEEEecC-CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc------CC
Q 021050 61 QELVIPNKYGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ------YG 133 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~------~~ 133 (318)
++..+...+|..+.+..+++ .++++||++||++++. ..|..++..|.++||+|+++|+||||.|.+... ..
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 56677778999999887765 4668999999998877 458889999999999999999999999975422 13
Q ss_pred ChhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHH---HHHHHh
Q 021050 134 NYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKD---YMEKIM 208 (318)
Q Consensus 134 ~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~ 208 (318)
++..+++|+.++++.+... +..+++++||||||.+++.+|.++|+ ++++|+++|............... ......
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHP 188 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhc
Confidence 6788899999999887554 55789999999999999999999999 999999988654321111111111 111110
Q ss_pred c--cCC----ccccCCCCccee-eechH---HHHHhhccC---------------h-----HHHhhhccCCCcEEEEEcC
Q 021050 209 Q--DGF----IDVKNKTGDVEY-RVTEE---SLMDRLNTN---------------M-----HDACLQIDMECSVLTIHGS 258 (318)
Q Consensus 209 ~--~~~----~~~~~~~~~~~~-~~~~~---~~~~~~~~~---------------~-----~~~~~~~~~~~P~lii~g~ 258 (318)
. ..+ ...........+ ....+ ...+.+..+ . .......++++|+|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~ 268 (330)
T PRK10749 189 RIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAE 268 (330)
T ss_pred CCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeC
Confidence 0 000 000000000000 00000 000100000 0 0001123678999999999
Q ss_pred CCCccCcchhHHHHhhC-------CCCEEEEECCCCccCC-CC---hHHHHHHHHHHHHhh
Q 021050 259 SDKIIPLQDAHEFDKII-------PNHKLHVVEGANHGYT-NH---QAELVSVVLDFVKAS 308 (318)
Q Consensus 259 ~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~-~~---~~~~~~~i~~fl~~~ 308 (318)
+|.+++++.++.+++.+ +++++++++|+||.++ +. .+++.+.|.+||+++
T Consensus 269 ~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 269 EERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999988888765 3468999999999975 33 356888999998764
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=6e-30 Score=207.98 Aligned_cols=235 Identities=15% Similarity=0.253 Sum_probs=161.2
Q ss_pred CCCcEEEEEEecCC-CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHH
Q 021050 68 KYGERLVGVLHDAE-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVV 146 (318)
Q Consensus 68 ~~g~~l~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i 146 (318)
.+|.++++.+.+.+ ..++|||+||++++. ..|..+.+.|.+. |+|+++|+||||.|+.+....++..+++|+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~~~~--~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i 85 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIGANL--ELVFPFIEALDPD-LEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARML 85 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCCcch--HHHHHHHHHhccC-ceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHH
Confidence 37888888665433 447899999999998 5689999999764 9999999999999986655557888899999999
Q ss_pred HHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcccc--chhhhh---h-h-HHHHHHHh-----ccCCc
Q 021050 147 QYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK--GGIEDR---L-G-KDYMEKIM-----QDGFI 213 (318)
Q Consensus 147 ~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~--~~~~~~---~-~-~~~~~~~~-----~~~~~ 213 (318)
+.+ +.++++|+||||||.+++.+|.++|+ |+++|++++..... ...... . . ........ ...+.
T Consensus 86 ~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 86 DYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 998 67789999999999999999999999 99999999875421 000000 0 0 00000000 00000
Q ss_pred cccCCCCcceee----e----chHHHHHhhc-cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEEC
Q 021050 214 DVKNKTGDVEYR----V----TEESLMDRLN-TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVE 284 (318)
Q Consensus 214 ~~~~~~~~~~~~----~----~~~~~~~~~~-~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 284 (318)
............ . .......... ..........++++|+|+++|++|++++++.++.+.+.++++++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~ 242 (276)
T TIGR02240 163 GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID 242 (276)
T ss_pred ceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc
Confidence 000000000000 0 0000000000 000011112367999999999999999999999999999999999998
Q ss_pred CCCccC-CCChHHHHHHHHHHHHhhc
Q 021050 285 GANHGY-TNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 285 ~~gH~~-~~~~~~~~~~i~~fl~~~~ 309 (318)
+ ||+. .++++++++.|.+|+++.-
T Consensus 243 ~-gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 243 D-GHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred C-CCchhhccHHHHHHHHHHHHHHhh
Confidence 6 9996 4788899999999998754
No 10
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=1.1e-29 Score=195.54 Aligned_cols=247 Identities=17% Similarity=0.249 Sum_probs=174.9
Q ss_pred ceeEEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYG 133 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~ 133 (318)
....-.+.+.+|..+.+..|.+ .++..|+++||++.... +.+..++..|+..||.|+++|++|||.|++.. ...
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s-~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~ 104 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSS-WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVP 104 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccch-hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCC
Confidence 3456677888999999887765 35678999999998875 57899999999999999999999999999865 346
Q ss_pred ChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhh-hH---HHHH
Q 021050 134 NYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRL-GK---DYME 205 (318)
Q Consensus 134 ~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~-~~---~~~~ 205 (318)
+++..++|+....+.++.+ ...+.+++||||||++++.++.+.|+ .+|+|+++|............ .. ..+.
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~ 184 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLS 184 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHH
Confidence 7888899999999987666 34578999999999999999999999 999999999776554332111 11 1111
Q ss_pred HHhccCCccccCCCCcceeeechH--------------------HHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCc
Q 021050 206 KIMQDGFIDVKNKTGDVEYRVTEE--------------------SLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL 265 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~ 265 (318)
.+.. .+...... .......... ...+.++..........++++|++++||++|.++++
T Consensus 185 ~liP-~wk~vp~~-d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp 262 (313)
T KOG1455|consen 185 KLIP-TWKIVPTK-DIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDP 262 (313)
T ss_pred HhCC-ceeecCCc-cccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCc
Confidence 1111 11101000 0000011111 111111111111111226799999999999999999
Q ss_pred chhHHHHhhCC--CCEEEEECCCCccCCC-C----hHHHHHHHHHHHHhh
Q 021050 266 QDAHEFDKIIP--NHKLHVVEGANHGYTN-H----QAELVSVVLDFVKAS 308 (318)
Q Consensus 266 ~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~----~~~~~~~i~~fl~~~ 308 (318)
+.++.+++..+ ++++.+|||.-|.++. + .+.+...|.+||+++
T Consensus 263 ~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 263 KVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999875 6899999999999752 2 356788999999865
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2e-29 Score=206.93 Aligned_cols=233 Identities=13% Similarity=0.140 Sum_probs=157.4
Q ss_pred CCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHH
Q 021050 69 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY 148 (318)
Q Consensus 69 ~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~ 148 (318)
+|.++.+... +++++||++||++++. ..|..+++.|.++ ++|+++|+||||.|+.+....++..+++|+.++++.
T Consensus 15 ~g~~i~y~~~--G~g~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 15 LGSRMAYIET--GEGDPIVFLHGNPTSS--YLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEEEEe--CCCCEEEEECCCCCCH--HHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 7777775544 4668999999999988 6799999999888 599999999999998766556788889999999998
Q ss_pred HHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc--hhhhhhhHHHHHHHhccCCcc--------ccC
Q 021050 149 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG--GIEDRLGKDYMEKIMQDGFID--------VKN 217 (318)
Q Consensus 149 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~ 217 (318)
+ +.++++++|||+||.+|+.+|.++|+ |+++|++++...... .+.... ......+....... ...
T Consensus 90 l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
T PRK03592 90 L---GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAV-RELFQALRSPGEGEEMVLEENVFIE 165 (295)
T ss_pred h---CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhH-HHHHHHHhCcccccccccchhhHHh
Confidence 8 66789999999999999999999999 999999997432211 011000 01111111100000 000
Q ss_pred -CC-CcceeeechHHH----------------HHhhc---c-----ChH-----HHhhhccCCCcEEEEEcCCCCccCcc
Q 021050 218 -KT-GDVEYRVTEESL----------------MDRLN---T-----NMH-----DACLQIDMECSVLTIHGSSDKIIPLQ 266 (318)
Q Consensus 218 -~~-~~~~~~~~~~~~----------------~~~~~---~-----~~~-----~~~~~~~~~~P~lii~g~~D~~~~~~ 266 (318)
.. .........+.+ .+... . ... ......++++|+|+|+|++|.++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 245 (295)
T PRK03592 166 RVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTG 245 (295)
T ss_pred hcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcH
Confidence 00 000000000000 00000 0 000 00111357999999999999999555
Q ss_pred hhHHH-HhhCCCCEEEEECCCCccC-CCChHHHHHHHHHHHHhhcC
Q 021050 267 DAHEF-DKIIPNHKLHVVEGANHGY-TNHQAELVSVVLDFVKASLK 310 (318)
Q Consensus 267 ~~~~~-~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~ 310 (318)
....+ .+..++.++++++++||+. .++++++.+.|.+|+++...
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 246 AIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 55444 4556789999999999997 47889999999999987643
No 12
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=4.2e-29 Score=200.60 Aligned_cols=219 Identities=21% Similarity=0.202 Sum_probs=149.9
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCChhhhHHHHHHHHHHHHhCCC-CcEEEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVVQYFCGANR-AVGAILG 161 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~-~~i~l~G 161 (318)
.+|||+||++.+. +.|..+++.|.+.||+|+++|+||||.|..... ..++..+++|+.++++.+ +. ++++++|
T Consensus 4 ~~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~lvG 78 (255)
T PLN02965 4 IHFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---PPDHKVILVG 78 (255)
T ss_pred eEEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc---CCCCCEEEEe
Confidence 3599999999888 569999999988899999999999999986543 456788899999999987 44 4899999
Q ss_pred EechHHHHHHHHhhcCC-ccEEEEeccCccccchh-hhhhhHHHHHH---HhccCCccccCCCC------c-ce----ee
Q 021050 162 HSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI-EDRLGKDYMEK---IMQDGFIDVKNKTG------D-VE----YR 225 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~------~-~~----~~ 225 (318)
|||||.+++.+|.++|+ |+++|++++........ .... ...... .............. . .. +.
T Consensus 79 hSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PLN02965 79 HSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRL-KNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYN 157 (255)
T ss_pred cCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHH-HhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhc
Confidence 99999999999999998 99999998753211100 0000 000000 00000000000000 0 00 00
Q ss_pred -echH--HH-HHhhccC-h-----HHHh--hhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CC
Q 021050 226 -VTEE--SL-MDRLNTN-M-----HDAC--LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TN 292 (318)
Q Consensus 226 -~~~~--~~-~~~~~~~-~-----~~~~--~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~ 292 (318)
...+ .. ...+... . .... ....+++|+++++|++|..+|++..+.+.+.++++++++++++||++ .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e 237 (255)
T PLN02965 158 QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFS 237 (255)
T ss_pred CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhc
Confidence 0000 00 0000000 0 0000 11247999999999999999999999999999999999999999997 58
Q ss_pred ChHHHHHHHHHHHHhh
Q 021050 293 HQAELVSVVLDFVKAS 308 (318)
Q Consensus 293 ~~~~~~~~i~~fl~~~ 308 (318)
+++++.+.|.+|++..
T Consensus 238 ~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 238 VPTTLFQYLLQAVSSL 253 (255)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8999999999998764
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=1e-28 Score=201.73 Aligned_cols=229 Identities=17% Similarity=0.207 Sum_probs=147.6
Q ss_pred EEEEEecCCCCeEEEEEccCCCCCCChhHH---HHHHHHHHcCceEEEEcCCCCCCCCCCccC-CChhhhHHHHHHHHHH
Q 021050 73 LVGVLHDAESSEIVVLCHGFRSTKDDPSMV---NLAVALQNEGISAFRFDFAGNGESEGSFQY-GNYWREADDLRAVVQY 148 (318)
Q Consensus 73 l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~-~~~~~~~~d~~~~i~~ 148 (318)
+..+|...+++|+||++||++++... |. .....+.+.||+|+++|+||||.|+..... ......++|+.++++.
T Consensus 20 ~~~~y~~~g~~~~ivllHG~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 20 FRIHYNEAGNGEAVIMLHGGGPGAGG--WSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (282)
T ss_pred eeEEEEecCCCCeEEEECCCCCchhh--HHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHH
Confidence 33335555677899999999987743 43 334566677899999999999999865321 1112357888888887
Q ss_pred HHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchh---hhhhhHHHH-----------HHHhccCCc
Q 021050 149 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI---EDRLGKDYM-----------EKIMQDGFI 213 (318)
Q Consensus 149 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~---~~~~~~~~~-----------~~~~~~~~~ 213 (318)
+ +.++++++||||||.+++.+|.++|+ ++++|++++........ ......... .........
T Consensus 98 l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T TIGR03343 98 L---DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLF 174 (282)
T ss_pred c---CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCcc
Confidence 7 77899999999999999999999998 99999998753211100 000000000 000000000
Q ss_pred cccCCCCcc---ee---eechHHHHHhhc-------cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEE
Q 021050 214 DVKNKTGDV---EY---RVTEESLMDRLN-------TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKL 280 (318)
Q Consensus 214 ~~~~~~~~~---~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~ 280 (318)
......... .+ ............ ..........++++|+|+++|++|.+++++.++.+.+.++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~ 254 (282)
T TIGR03343 175 DQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQL 254 (282)
T ss_pred CcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEE
Confidence 000000000 00 000000000000 00000111236799999999999999999999999999999999
Q ss_pred EEECCCCccC-CCChHHHHHHHHHHHH
Q 021050 281 HVVEGANHGY-TNHQAELVSVVLDFVK 306 (318)
Q Consensus 281 ~~~~~~gH~~-~~~~~~~~~~i~~fl~ 306 (318)
++++++||+. .++++++.+.|.+||+
T Consensus 255 ~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 255 HVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999997 4788899999999986
No 14
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=2.2e-29 Score=184.33 Aligned_cols=221 Identities=19% Similarity=0.233 Sum_probs=158.0
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 162 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 162 (318)
+.+|+++||+.|+. ...+.+.++|.++||.|.+|.+||||......-..++.+|.+|+.+..++|.+.+.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~--~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTP--RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCc--HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 48999999999999 5599999999999999999999999999877777789999999999999999889999999999
Q ss_pred echHHHHHHHHhhcCCccEEEEeccCccccch--hhhhhhHHHHHHHhccCCccccCCC-CcceeeechH-HHHHhhccC
Q 021050 163 SKGGSVVLLYASKYNDIRTFVNVSGRYDLKGG--IEDRLGKDYMEKIMQDGFIDVKNKT-GDVEYRVTEE-SLMDRLNTN 238 (318)
Q Consensus 163 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 238 (318)
||||.+++.+|.++| ++++|.++++...... +.+.+. .+.+......-.+..... ....+.-.+. .........
T Consensus 93 SmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l-~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i 170 (243)
T COG1647 93 SMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLL-EYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI 170 (243)
T ss_pred cchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHH-HHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 999999999999999 9999999998764322 111110 111111110000000000 0000000000 000000000
Q ss_pred hHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC--CCEEEEECCCCccCC--CChHHHHHHHHHHHHh
Q 021050 239 MHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP--NHKLHVVEGANHGYT--NHQAELVSVVLDFVKA 307 (318)
Q Consensus 239 ~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 307 (318)
.......-.|..|+++++|.+|+.+|.+.+..+++... +.++.+++++||... .+.+.+.+.|..||+.
T Consensus 171 ~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 171 KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 00000011578999999999999999999999998764 579999999999975 4567899999999963
No 15
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=1.2e-27 Score=200.92 Aligned_cols=250 Identities=16% Similarity=0.218 Sum_probs=169.6
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC---CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGN 134 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~ 134 (318)
......+..++|..+.+..+.+. .+++||++||++++. ..|..+++.|+++||+|+++|+||||.|++... ..+
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~--~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHS--GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHH--HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 35667778888888888877552 467999999999887 568899999999999999999999999987543 346
Q ss_pred hhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcC----CccEEEEeccCccccchhhh-hhhHHHHHHHh
Q 021050 135 YWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYN----DIRTFVNVSGRYDLKGGIED-RLGKDYMEKIM 208 (318)
Q Consensus 135 ~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 208 (318)
++.+.+|+.++++++... +..+++++||||||.+++.++. +| .++++|+.+|.......... .........+.
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 677789999999999765 3347999999999999998765 44 28999999987654321110 00011111111
Q ss_pred ccCCccccCCCCcceeeechHHHHHhh-------------------ccChHHHhhhccCCCcEEEEEcCCCCccCcchhH
Q 021050 209 QDGFIDVKNKTGDVEYRVTEESLMDRL-------------------NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAH 269 (318)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~ 269 (318)
............ .............+ ...........++++|+|+++|++|.++|++.++
T Consensus 266 p~~~~~~~~~~~-~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~ 344 (395)
T PLN02652 266 PRFQFKGANKRG-IPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQ 344 (395)
T ss_pred CCCcccCccccc-CCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHH
Confidence 100000000000 00000000000000 0000001112367999999999999999999999
Q ss_pred HHHhhCC--CCEEEEECCCCccCC-C-ChHHHHHHHHHHHHhhcCCC
Q 021050 270 EFDKIIP--NHKLHVVEGANHGYT-N-HQAELVSVVLDFVKASLKQD 312 (318)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~gH~~~-~-~~~~~~~~i~~fl~~~~~~~ 312 (318)
.+++..+ +++++++++++|..+ + +++++.+.|.+||.+++...
T Consensus 345 ~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~~ 391 (395)
T PLN02652 345 DLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDLV 391 (395)
T ss_pred HHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhcc
Confidence 9988765 478999999999964 4 57899999999999988643
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=2.5e-28 Score=199.11 Aligned_cols=233 Identities=18% Similarity=0.196 Sum_probs=157.8
Q ss_pred CCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCChhhhHHHHHHHH
Q 021050 68 KYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVV 146 (318)
Q Consensus 68 ~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~~~~~~d~~~~i 146 (318)
.+|.++.+.-.++.++|+||++||++++. ..|..+.+.|++ +|+|+++|+||||.|..+.. ..++..+++|+.+++
T Consensus 13 ~~~~~~~~~~~g~~~~~~vv~~hG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i 89 (278)
T TIGR03056 13 VGPFHWHVQDMGPTAGPLLLLLHGTGAST--HSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALC 89 (278)
T ss_pred ECCEEEEEEecCCCCCCeEEEEcCCCCCH--HHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHH
Confidence 37777776555444578999999999988 568999999976 49999999999999986554 467888899999888
Q ss_pred HHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhh----hhhH---------HHHHHHhcc--
Q 021050 147 QYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED----RLGK---------DYMEKIMQD-- 210 (318)
Q Consensus 147 ~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~----~~~~---------~~~~~~~~~-- 210 (318)
+.+ +.++++|+||||||.+++.+|.++|+ ++++|++++.......... .... .........
T Consensus 90 ~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (278)
T TIGR03056 90 AAE---GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQ 166 (278)
T ss_pred HHc---CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCc
Confidence 876 56789999999999999999999998 9999999876532211100 0000 000000000
Q ss_pred CCccccCCCCcceeeechHHHH-------------Hhhcc-ChH-HHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC
Q 021050 211 GFIDVKNKTGDVEYRVTEESLM-------------DRLNT-NMH-DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII 275 (318)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~-~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~ 275 (318)
...................... +.... ... ......++++|+++++|++|..+|++..+.+.+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~ 246 (278)
T TIGR03056 167 RVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV 246 (278)
T ss_pred chhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc
Confidence 0000000000000000000000 00000 000 00111257899999999999999999999999999
Q ss_pred CCCEEEEECCCCccCC-CChHHHHHHHHHHHH
Q 021050 276 PNHKLHVVEGANHGYT-NHQAELVSVVLDFVK 306 (318)
Q Consensus 276 ~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 306 (318)
+++++++++++||+++ ++++++.+.|.+|++
T Consensus 247 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 247 PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999999974 788999999999984
No 17
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.96 E-value=6.9e-28 Score=188.64 Aligned_cols=236 Identities=19% Similarity=0.205 Sum_probs=164.1
Q ss_pred CCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc--CCChhhhHHHHHHH
Q 021050 68 KYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADDLRAV 145 (318)
Q Consensus 68 ~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~--~~~~~~~~~d~~~~ 145 (318)
-+|.++++...+++.+|+|+++||+.... +.|+.....|+.+||+|+++|+||+|.|+.+.. ..++...+.|+..+
T Consensus 29 ~~gI~~h~~e~g~~~gP~illlHGfPe~w--yswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~l 106 (322)
T KOG4178|consen 29 YKGIRLHYVEGGPGDGPIVLLLHGFPESW--YSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVAL 106 (322)
T ss_pred EccEEEEEEeecCCCCCEEEEEccCCccc--hhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHH
Confidence 36767776666677999999999999999 569999999999999999999999999998764 46778889999999
Q ss_pred HHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc--------h--------------------hh
Q 021050 146 VQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG--------G--------------------IE 196 (318)
Q Consensus 146 i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------~--------------------~~ 196 (318)
++.+ +.++++++||++|+.+|..+|..+|+ |+++|+++.+...+. . +.
T Consensus 107 ld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 107 LDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred HHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhc
Confidence 9999 78899999999999999999999999 999999987655110 0 00
Q ss_pred hhhhHHHHHHHhccCCccccCCC---CcceeeechHHHH------------------HhhccCh-HHHhhhccCCCcEEE
Q 021050 197 DRLGKDYMEKIMQDGFIDVKNKT---GDVEYRVTEESLM------------------DRLNTNM-HDACLQIDMECSVLT 254 (318)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~~P~li 254 (318)
....+.....+............ .....-.+.+.+. ..+...+ .......++++|+++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~f 263 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLF 263 (322)
T ss_pred cchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEE
Confidence 00001111111111111000000 0000000111111 0111111 111222367999999
Q ss_pred EEcCCCCccCcc-hhHHHHhhCCCC-EEEEECCCCccC-CCChHHHHHHHHHHHHhh
Q 021050 255 IHGSSDKIIPLQ-DAHEFDKIIPNH-KLHVVEGANHGY-TNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 255 i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 308 (318)
++|++|.+.+.. ..+.+.+..++. +.++++|+||+. +++++++.+.|.+|+++.
T Consensus 264 i~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 264 IWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred EEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 999999998866 445556666664 788999999997 588999999999999875
No 18
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=4.1e-28 Score=203.92 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=156.1
Q ss_pred CCCCCC-ceeEEEEeC---CCCcEEEEEEecCCC-------CeEEEEEccCCCCCCChhHH--HHHHHH-------HHcC
Q 021050 53 SPQNLV-KQQELVIPN---KYGERLVGVLHDAES-------SEIVVLCHGFRSTKDDPSMV--NLAVAL-------QNEG 112 (318)
Q Consensus 53 ~~~~~~-~~~~v~~~~---~~g~~l~~~~~~~~~-------~~~vv~~hG~~~~~~~~~~~--~~~~~l-------~~~G 112 (318)
.|++.. .-+++++.+ .+|..+.+...+.+. +|+||++||++++... |. .+.+.| ..++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~--~~~~~~~~~l~~~~~~l~~~~ 105 (360)
T PRK06489 28 APQEGDWVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS--FLSPTFAGELFGPGQPLDASK 105 (360)
T ss_pred CCccCceeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh--hccchhHHHhcCCCCcccccC
Confidence 344433 445556655 466677765554433 7899999999998743 43 455444 1356
Q ss_pred ceEEEEcCCCCCCCCCCcc-------CCChhhhHHHHHHHH-HHHHhCCCCcEE-EEEEechHHHHHHHHhhcCC-ccEE
Q 021050 113 ISAFRFDFAGNGESEGSFQ-------YGNYWREADDLRAVV-QYFCGANRAVGA-ILGHSKGGSVVLLYASKYND-IRTF 182 (318)
Q Consensus 113 ~~v~~~d~~g~G~s~~~~~-------~~~~~~~~~d~~~~i-~~l~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~~ 182 (318)
|+|+++|+||||.|+.+.. ..++.+.++++.+++ +.+ +.++++ |+||||||++|+.+|.++|+ |+++
T Consensus 106 ~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l---gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~L 182 (360)
T PRK06489 106 YFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL---GVKHLRLILGTSMGGMHAWMWGEKYPDFMDAL 182 (360)
T ss_pred CEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc---CCCceeEEEEECHHHHHHHHHHHhCchhhhee
Confidence 9999999999999976432 245666677766643 555 667775 89999999999999999999 9999
Q ss_pred EEeccCccccchhhhhhhHHHHHHHhcc-CC-----ccc------------------------cCCCCcc---e------
Q 021050 183 VNVSGRYDLKGGIEDRLGKDYMEKIMQD-GF-----IDV------------------------KNKTGDV---E------ 223 (318)
Q Consensus 183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~------------------------~~~~~~~---~------ 223 (318)
|++++...................+... .+ ... ....... .
T Consensus 183 VLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T PRK06489 183 MPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLA 262 (360)
T ss_pred eeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHH
Confidence 9998753211100000000000000000 00 000 0000000 0
Q ss_pred --eeechHHHHHhh----ccChHHHhhhccCCCcEEEEEcCCCCccCcchh--HHHHhhCCCCEEEEECCC----CccCC
Q 021050 224 --YRVTEESLMDRL----NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDA--HEFDKIIPNHKLHVVEGA----NHGYT 291 (318)
Q Consensus 224 --~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~ 291 (318)
.......+...+ ..+.. ....+|++|+|+|+|++|.++|++.+ +.+.+.+|+.++++++++ ||..+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~d~~--~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~ 340 (360)
T PRK06489 263 APVTADANDFLYQWDSSRDYNPS--PDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT 340 (360)
T ss_pred hhhhcCHHHHHHHHHHhhccChH--HHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc
Confidence 000000000000 00111 11126799999999999999998875 788999999999999996 99988
Q ss_pred CChHHHHHHHHHHHHhhc
Q 021050 292 NHQAELVSVVLDFVKASL 309 (318)
Q Consensus 292 ~~~~~~~~~i~~fl~~~~ 309 (318)
++++++.+.|.+||++..
T Consensus 341 e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 341 GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred cCHHHHHHHHHHHHHhcc
Confidence 889999999999998654
No 19
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.96 E-value=4.4e-29 Score=181.67 Aligned_cols=253 Identities=17% Similarity=0.186 Sum_probs=187.9
Q ss_pred ccccccccccccccchhhhhhhccccCcCCCCCC-ceeEEEEeCCCCcEEEEEEecC-CCCeEEEEEccCCCCCCChhHH
Q 021050 25 IFLCQVRIVSSTNRSRSFRRSLKMSQSVSPQNLV-KQQELVIPNKYGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPSMV 102 (318)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~g~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~ 102 (318)
+|-+|..++|++.+ ..+|.. ...|.+.. +.+.+++.+.|..++.+++... .+.|+++++|+..++... ..
T Consensus 24 lY~yQ~~LvYps~p----qgsR~~--vptP~~~n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGh--r~ 95 (300)
T KOG4391|consen 24 LYKYQKTLVYPSFP----QGSREN--VPTPKEFNMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGH--RL 95 (300)
T ss_pred HHHHhceeeccCcc----cccccC--CCCccccCCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccc--hh
Confidence 57789999998843 222333 45566655 8899999999999999987754 488999999999999853 44
Q ss_pred HHHHHH-HHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC
Q 021050 103 NLAVAL-QNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND 178 (318)
Q Consensus 103 ~~~~~l-~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~ 178 (318)
..+..+ ..-+.+|+.++|||+|.|.+.+++.++ .-|..++++++..+ +..+++++|.|+||++|+.+|++..+
T Consensus 96 ~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL---~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ 172 (300)
T KOG4391|consen 96 PIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL---KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD 172 (300)
T ss_pred hHHHHHHHHcCceEEEEEeeccccCCCCccccce---eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh
Confidence 455444 555899999999999999998877665 66888999999887 56789999999999999999999877
Q ss_pred -ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEc
Q 021050 179 -IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHG 257 (318)
Q Consensus 179 -v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g 257 (318)
+.++|+-+.+...+.........-..+.+. .-...+.+..... ....+.|.|++.|
T Consensus 173 ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~-------------------~lc~kn~~~S~~k----i~~~~~P~LFiSG 229 (300)
T KOG4391|consen 173 RISAIIVENTFLSIPHMAIPLVFPFPMKYIP-------------------LLCYKNKWLSYRK----IGQCRMPFLFISG 229 (300)
T ss_pred heeeeeeechhccchhhhhheeccchhhHHH-------------------HHHHHhhhcchhh----hccccCceEEeec
Confidence 999998888766644332221110000000 0000001110000 0134789999999
Q ss_pred CCCCccCcchhHHHHhhCCC--CEEEEECCCCccCCCChHHHHHHHHHHHHhhcCC
Q 021050 258 SSDKIIPLQDAHEFDKIIPN--HKLHVVEGANHGYTNHQAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~ 311 (318)
.+|++||+-..+.+++.++. +++..+|++.|.-..-.+-+++.|.+||.+....
T Consensus 230 lkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 230 LKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhccC
Confidence 99999999999999999874 7899999999996655678999999999987654
No 20
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1e-27 Score=201.12 Aligned_cols=233 Identities=17% Similarity=0.238 Sum_probs=152.2
Q ss_pred CCc-EEEEEEecCC----CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCChhhhHHHH
Q 021050 69 YGE-RLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDL 142 (318)
Q Consensus 69 ~g~-~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~~~~~~d~ 142 (318)
+|. ++++...+++ .+|+|||+||++++. ..|..++..|.+ +|+|+++|+||||.|+.+.. ..++..+++++
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l 145 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASI--PHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELI 145 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHH
Confidence 354 7776555544 458999999999988 679999999976 69999999999999986542 45678888999
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhh-cCC-ccEEEEeccCccccc-----hhhhh-h---------------
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASK-YND-IRTFVNVSGRYDLKG-----GIEDR-L--------------- 199 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~-v~~~v~~~~~~~~~~-----~~~~~-~--------------- 199 (318)
.++++.+ +.++++|+||||||.+++.++.. +|+ |+++|++++...... ..... .
T Consensus 146 ~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
T PLN02679 146 LDFLEEV---VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRG 222 (360)
T ss_pred HHHHHHh---cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchh
Confidence 9998877 67789999999999999988874 687 999999987542210 00000 0
Q ss_pred -hHHH---------HHHHhccCCccccCCCCcc--------eeeechHHHHHhhcc--ChHHHhhhccCCCcEEEEEcCC
Q 021050 200 -GKDY---------MEKIMQDGFIDVKNKTGDV--------EYRVTEESLMDRLNT--NMHDACLQIDMECSVLTIHGSS 259 (318)
Q Consensus 200 -~~~~---------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~lii~g~~ 259 (318)
.... ...+....+.......... ........+...... .........++++|+|+++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~ 302 (360)
T PLN02679 223 IASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQ 302 (360)
T ss_pred hHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCC
Confidence 0000 0000000000000000000 000000111111110 0000111225799999999999
Q ss_pred CCccCcch-----hHHHHhhCCCCEEEEECCCCccCC-CChHHHHHHHHHHHHh
Q 021050 260 DKIIPLQD-----AHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 307 (318)
Q Consensus 260 D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 307 (318)
|.++|++. .+.+.+.++++++++++++||+.+ ++++++.+.|.+||++
T Consensus 303 D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 303 DPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 99998863 235666789999999999999975 7889999999999976
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.96 E-value=2.6e-28 Score=196.48 Aligned_cols=219 Identities=19% Similarity=0.206 Sum_probs=149.8
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
.++|+||++||++++. ..|..++..|.+. |+|+++|+||||.|.... ..++.++++|+.++++.+ +.++++|+
T Consensus 14 ~~~~~iv~lhG~~~~~--~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l---~~~~~~lv 86 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL--DNLGVLARDLVND-HDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDAL---QIEKATFI 86 (255)
T ss_pred CCCCCEEEECCCCCch--hHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHc---CCCceEEE
Confidence 4678999999999998 4688899999764 999999999999998654 357888899999999988 66789999
Q ss_pred EEechHHHHHHHHhhcCC-ccEEEEeccCccccc-hhhhhhhHHHH-------------HHHhccCCcc-----cc-CCC
Q 021050 161 GHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-GIEDRLGKDYM-------------EKIMQDGFID-----VK-NKT 219 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~-----~~-~~~ 219 (318)
||||||.+++.+|.++|+ |+++|++++...... ........... .......... .. ...
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSF 166 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcC
Confidence 999999999999999998 999999865322110 00000000000 0000000000 00 000
Q ss_pred CcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CCChHHHH
Q 021050 220 GDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELV 298 (318)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~ 298 (318)
....+..........+... ........+++|+|+|+|++|..++.+..+.+.+.++++++.+++++||.. .++++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 167 VDGEWRFNVPVLWDQYPHI-VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CcceeEeeHHHHHHhHHHH-hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHH
Confidence 0000111111111100000 000011256899999999999999999999999999999999999999996 47788899
Q ss_pred HHHHHHHHh
Q 021050 299 SVVLDFVKA 307 (318)
Q Consensus 299 ~~i~~fl~~ 307 (318)
+.|.+||.+
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999975
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=1.8e-27 Score=202.31 Aligned_cols=238 Identities=17% Similarity=0.224 Sum_probs=155.7
Q ss_pred EEeCCCCcEEEEEEecCC---CCeEEEEEccCCCCCCChhHHH-HHHHHH---HcCceEEEEcCCCCCCCCCCc-cCCCh
Q 021050 64 VIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVN-LAVALQ---NEGISAFRFDFAGNGESEGSF-QYGNY 135 (318)
Q Consensus 64 ~~~~~~g~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~~g~G~s~~~~-~~~~~ 135 (318)
.+.+.+|.++++...++. .+|+|||+||++++. ..|.. +.+.|. +++|+|+++|+||||.|+.+. ...++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~--~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl 256 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS--AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTL 256 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccH--HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCH
Confidence 444445678887776653 257999999999988 45664 445554 368999999999999998653 23567
Q ss_pred hhhHHHHH-HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCC-
Q 021050 136 WREADDLR-AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGF- 212 (318)
Q Consensus 136 ~~~~~d~~-~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (318)
.++++++. .+++.+ +.++++++||||||.+++.+|.++|+ |+++|+++++......-... .............
T Consensus 257 ~~~a~~l~~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 332 (481)
T PLN03087 257 REHLEMIERSVLERY---KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA-TQYVMRKVAPRRVW 332 (481)
T ss_pred HHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH-HHHHHHHhcccccC
Confidence 77777774 677766 77899999999999999999999999 99999998754322110000 0000000000000
Q ss_pred c-----cc-------cCCC-------Ccceee-----ec----hHHHHH----------------hhcc-----ChHHHh
Q 021050 213 I-----DV-------KNKT-------GDVEYR-----VT----EESLMD----------------RLNT-----NMHDAC 243 (318)
Q Consensus 213 ~-----~~-------~~~~-------~~~~~~-----~~----~~~~~~----------------~~~~-----~~~~~~ 243 (318)
. .. .... ....+. .. .....+ .+.. +.....
T Consensus 333 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~ 412 (481)
T PLN03087 333 PPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH 412 (481)
T ss_pred CccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH
Confidence 0 00 0000 000000 00 000000 0000 000000
Q ss_pred hhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCC--CChHHHHHHHHHHHHh
Q 021050 244 LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT--NHQAELVSVVLDFVKA 307 (318)
Q Consensus 244 ~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 307 (318)
...++++|+|+++|++|.++|++.++.+.+.+|++++++++++||..+ ++++++++.|.+|+..
T Consensus 413 l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 111479999999999999999999999999999999999999999953 7899999999999864
No 23
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=2.4e-27 Score=191.79 Aligned_cols=248 Identities=23% Similarity=0.307 Sum_probs=171.2
Q ss_pred eEEEEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC-CC-ccCCChh
Q 021050 61 QELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE-GS-FQYGNYW 136 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~-~~-~~~~~~~ 136 (318)
.+-.+...||..+.+..+.+. +..+||++||.+.+. .-|..++..|..+||.|+++|+||||.|. +. ....++.
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~--~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~ 87 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHS--GRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFA 87 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHH--HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHH
Confidence 445566679999998877655 237999999999999 55889999999999999999999999997 33 3445688
Q ss_pred hhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc-hhhhhhh---HHHHHHHhcc
Q 021050 137 READDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-GIEDRLG---KDYMEKIMQD 210 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~~~~---~~~~~~~~~~ 210 (318)
++..|+..+++.+... ...+++++||||||.+++.++.+++. |+++|+.+|.+.+.. ....... ......+...
T Consensus 88 ~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~ 167 (298)
T COG2267 88 DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPK 167 (298)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccc
Confidence 8899999999998764 56789999999999999999999987 999999999887763 1111111 0111111100
Q ss_pred CCcccc-CCCCcceeeechHHHHHhhccChH---------------------HHhhhccCCCcEEEEEcCCCCccC-cch
Q 021050 211 GFIDVK-NKTGDVEYRVTEESLMDRLNTNMH---------------------DACLQIDMECSVLTIHGSSDKIIP-LQD 267 (318)
Q Consensus 211 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~P~lii~g~~D~~~~-~~~ 267 (318)
...... ................+.+..+.. .......+++|+|+++|++|.+++ .+.
T Consensus 168 ~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~ 247 (298)
T COG2267 168 LPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEG 247 (298)
T ss_pred cccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHH
Confidence 000000 000000011111112222221110 111123568999999999999999 677
Q ss_pred hHHHHhhC--CCCEEEEECCCCccCCCC--h--HHHHHHHHHHHHhhcC
Q 021050 268 AHEFDKII--PNHKLHVVEGANHGYTNH--Q--AELVSVVLDFVKASLK 310 (318)
Q Consensus 268 ~~~~~~~~--~~~~~~~~~~~gH~~~~~--~--~~~~~~i~~fl~~~~~ 310 (318)
..++.+.. +++++++++|+.|..+.+ . +++.+.+.+|+.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 248 LARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 77777665 467899999999997643 3 6788889999887654
No 24
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=2e-27 Score=193.59 Aligned_cols=235 Identities=14% Similarity=0.160 Sum_probs=151.6
Q ss_pred EEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCChhhhHH
Q 021050 62 ELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREAD 140 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~~~~~~ 140 (318)
...++. +|.++++. ..|++|+|||+||++.+. ..|..+.+.|.+. |+|+++|+||||.|+.+.. ..+....++
T Consensus 16 ~~~~~~-~~~~i~y~--~~G~~~~iv~lHG~~~~~--~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (286)
T PRK03204 16 SRWFDS-SRGRIHYI--DEGTGPPILLCHGNPTWS--FLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHAR 89 (286)
T ss_pred ceEEEc-CCcEEEEE--ECCCCCEEEEECCCCccH--HHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHH
Confidence 334443 56677744 345678999999998776 5688899999764 9999999999999986543 345677788
Q ss_pred HHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhh-hh---------HH------H
Q 021050 141 DLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR-LG---------KD------Y 203 (318)
Q Consensus 141 d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-~~---------~~------~ 203 (318)
++.++++.+ +.++++++||||||.+++.++..+|+ |+++|++++........... .. .. +
T Consensus 90 ~~~~~~~~~---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (286)
T PRK03204 90 VIGEFVDHL---GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFF 166 (286)
T ss_pred HHHHHHHHh---CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHH
Confidence 888888877 67789999999999999999999998 99999987754221111000 00 00 0
Q ss_pred HHHHhccCCccccCCCCccee-e-e-c---hHHHH---HhhccC--hHHH----hhhccCCCcEEEEEcCCCCccCcc-h
Q 021050 204 MEKIMQDGFIDVKNKTGDVEY-R-V-T---EESLM---DRLNTN--MHDA----CLQIDMECSVLTIHGSSDKIIPLQ-D 267 (318)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~-~-~-~---~~~~~---~~~~~~--~~~~----~~~~~~~~P~lii~g~~D~~~~~~-~ 267 (318)
...+................+ . . . ...+. ..+... .... .....+++|+++|+|++|..+++. .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~ 246 (286)
T PRK03204 167 VERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTI 246 (286)
T ss_pred HHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHH
Confidence 011100000000000000000 0 0 0 00000 000000 0000 001122899999999999988655 5
Q ss_pred hHHHHhhCCCCEEEEECCCCccCC-CChHHHHHHHHHHH
Q 021050 268 AHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFV 305 (318)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 305 (318)
.+.+.+.+++.++++++++||+.+ ++++++.+.|.+|+
T Consensus 247 ~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 247 LPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 688889999999999999999974 78899999999997
No 25
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.96 E-value=1.1e-27 Score=193.03 Aligned_cols=218 Identities=16% Similarity=0.249 Sum_probs=149.8
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCCChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
.++|+||++||++++. ..|..+++.|.+ ||+|+++|+||||.|.... ...++.++++++.++++.+ +..++++
T Consensus 11 ~~~~~iv~lhG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~l 84 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG--SYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL---NIERFHF 84 (257)
T ss_pred CCCCEEEEEcCCCcch--hHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---CCCcEEE
Confidence 3578999999999998 568888888865 5999999999999998653 3457788889999988887 6678999
Q ss_pred EEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhh--HHHHHHHhccCCcc----------ccCC-------C
Q 021050 160 LGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG--KDYMEKIMQDGFID----------VKNK-------T 219 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~-------~ 219 (318)
+||||||.+++.++.++|+ ++++|++++............. ..+........+.. .... .
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAAD 164 (257)
T ss_pred EEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhh
Confidence 9999999999999999998 9999999875543221111000 00000000000000 0000 0
Q ss_pred -Ccceee-echHHHHH----hhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CC
Q 021050 220 -GDVEYR-VTEESLMD----RLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TN 292 (318)
Q Consensus 220 -~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~ 292 (318)
...... ........ ....+... ...++++|+++++|++|.++|++.++.+.+.+++.+++.++++||.+ .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 242 (257)
T TIGR03611 165 EAHALAHFPGKANVLRRINALEAFDVSA--RLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVT 242 (257)
T ss_pred hhhcccccCccHHHHHHHHHHHcCCcHH--HhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCcccc
Confidence 000000 00000000 01111111 12256899999999999999999999999999999999999999996 47
Q ss_pred ChHHHHHHHHHHHH
Q 021050 293 HQAELVSVVLDFVK 306 (318)
Q Consensus 293 ~~~~~~~~i~~fl~ 306 (318)
+++++.+.|.+||+
T Consensus 243 ~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 243 DPETFNRALLDFLK 256 (257)
T ss_pred CHHHHHHHHHHHhc
Confidence 88899999999985
No 26
>PLN02511 hydrolase
Probab=99.96 E-value=3.2e-27 Score=199.31 Aligned_cols=253 Identities=18% Similarity=0.173 Sum_probs=162.8
Q ss_pred ceeEEEEeCCCCcEEEEEEec------CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC
Q 021050 59 KQQELVIPNKYGERLVGVLHD------AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 132 (318)
..++..+.+.||..+...+.. +..+|+||++||++++..+.++..++..+.++||+|+++|+||||.|......
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~ 149 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ 149 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC
Confidence 445667778899888865543 23578999999998877543556677888889999999999999999754332
Q ss_pred CChhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC---ccEEEEeccCccccch---hhh----hhhH
Q 021050 133 GNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYDLKGG---IED----RLGK 201 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~---~~~----~~~~ 201 (318)
.......+|+.++++++... +..+++++||||||.+++.++.++++ |.++++++++.+.... +.. ....
T Consensus 150 ~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~ 229 (388)
T PLN02511 150 FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDK 229 (388)
T ss_pred EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHH
Confidence 22345688999999999875 33579999999999999999999886 7888888887654211 000 1111
Q ss_pred HHHHHH---hcc---CCccccCCC--CcceeeechHHHHHhhc-----cCh-H---H----HhhhccCCCcEEEEEcCCC
Q 021050 202 DYMEKI---MQD---GFIDVKNKT--GDVEYRVTEESLMDRLN-----TNM-H---D----ACLQIDMECSVLTIHGSSD 260 (318)
Q Consensus 202 ~~~~~~---~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~-~---~----~~~~~~~~~P~lii~g~~D 260 (318)
.+...+ ... .+....... ...........+.+.+. ... . . .....+|++|+|+|+|++|
T Consensus 230 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dD 309 (388)
T PLN02511 230 ALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAAND 309 (388)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCC
Confidence 111111 000 000000000 00000000111111110 000 0 0 0112267999999999999
Q ss_pred CccCcchh-HHHHhhCCCCEEEEECCCCccCC-CChHH------HHHHHHHHHHhhcCC
Q 021050 261 KIIPLQDA-HEFDKIIPNHKLHVVEGANHGYT-NHQAE------LVSVVLDFVKASLKQ 311 (318)
Q Consensus 261 ~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~-~~~~~------~~~~i~~fl~~~~~~ 311 (318)
++++.+.. ....+..+++++++++++||..+ +.++. +.+.+.+||+.....
T Consensus 310 pi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 310 PIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 99997765 45667789999999999999954 55543 588999999876543
No 27
>PLN02578 hydrolase
Probab=99.96 E-value=2.1e-27 Score=199.03 Aligned_cols=229 Identities=17% Similarity=0.228 Sum_probs=153.9
Q ss_pred CCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHH
Q 021050 69 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY 148 (318)
Q Consensus 69 ~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~ 148 (318)
+|..+.+.. .+++|+||++||++++. ..|..+.+.|+++ |+|+++|+||||.|+++....+...+++|+.++++.
T Consensus 74 ~~~~i~Y~~--~g~g~~vvliHG~~~~~--~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 74 RGHKIHYVV--QGEGLPIVLIHGFGASA--FHWRYNIPELAKK-YKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CCEEEEEEE--cCCCCeEEEECCCCCCH--HHHHHHHHHHhcC-CEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 566676443 45668899999999987 5688888999764 999999999999999876556777778888888887
Q ss_pred HHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch-------------hhhh-hhHH---HHHHHh--
Q 021050 149 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-------------IEDR-LGKD---YMEKIM-- 208 (318)
Q Consensus 149 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-------------~~~~-~~~~---~~~~~~-- 208 (318)
+ ..++++++|||+||.+++.+|.++|+ |+++|++++....... .... .... ......
T Consensus 149 ~---~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (354)
T PLN02578 149 V---VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLG 225 (354)
T ss_pred h---ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHH
Confidence 7 55789999999999999999999999 9999999764321100 0000 0000 000000
Q ss_pred ----------------ccCCccccCCCCcc-------ee-eechHHHHHh----hc--cChHHHhhhccCCCcEEEEEcC
Q 021050 209 ----------------QDGFIDVKNKTGDV-------EY-RVTEESLMDR----LN--TNMHDACLQIDMECSVLTIHGS 258 (318)
Q Consensus 209 ----------------~~~~~~~~~~~~~~-------~~-~~~~~~~~~~----~~--~~~~~~~~~~~~~~P~lii~g~ 258 (318)
...+.+........ .. ......+... +. ..........++++|+++|+|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~ 305 (354)
T PLN02578 226 FLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGD 305 (354)
T ss_pred HHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeC
Confidence 00000000000000 00 0000000000 00 0000111112579999999999
Q ss_pred CCCccCcchhHHHHhhCCCCEEEEECCCCccCC-CChHHHHHHHHHHHH
Q 021050 259 SDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVK 306 (318)
Q Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 306 (318)
+|.+++.+.++.+.+.+++.+++++ ++||+.+ ++++++.+.|.+|++
T Consensus 306 ~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 306 LDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999999999999 5899975 788999999999985
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=1.8e-27 Score=190.76 Aligned_cols=222 Identities=18% Similarity=0.255 Sum_probs=150.1
Q ss_pred EecCC-CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCC
Q 021050 77 LHDAE-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRA 155 (318)
Q Consensus 77 ~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~ 155 (318)
..+++ ++|+||++||++.+. ..|..+++.|. .||+|+++|+||+|.|.......++.++++|+.++++.+ +.+
T Consensus 6 ~~g~~~~~~~li~~hg~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~---~~~ 79 (251)
T TIGR02427 6 LDGAADGAPVLVFINSLGTDL--RMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL---GIE 79 (251)
T ss_pred eecCCCCCCeEEEEcCcccch--hhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCC
Confidence 33443 578999999999888 56888888886 579999999999999976655567888899999888877 667
Q ss_pred cEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc--hhhhhhh-------HH----HHHHHhccCCccccCCCC-
Q 021050 156 VGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG--GIEDRLG-------KD----YMEKIMQDGFIDVKNKTG- 220 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~- 220 (318)
+++++|||+||.+++.+|.++|+ ++++|++++...... ....... .. ....+....+........
T Consensus 80 ~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR02427 80 RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLD 159 (251)
T ss_pred ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHH
Confidence 89999999999999999999988 999998886543221 1100000 00 000000000000000000
Q ss_pred cce---eeechHHHH---Hhhc-cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CC
Q 021050 221 DVE---YRVTEESLM---DRLN-TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TN 292 (318)
Q Consensus 221 ~~~---~~~~~~~~~---~~~~-~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~ 292 (318)
... .......+. ..+. .+... ...++++|+++++|++|..+|.+..+.+.+.+++.++++++++||.. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 237 (251)
T TIGR02427 160 LYRNMLVRQPPDGYAGCCAAIRDADFRD--RLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVE 237 (251)
T ss_pred HHHHHHHhcCHHHHHHHHHHHhcccHHH--HhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCccccc
Confidence 000 000000000 0000 01111 11256899999999999999999999999999999999999999996 57
Q ss_pred ChHHHHHHHHHHHH
Q 021050 293 HQAELVSVVLDFVK 306 (318)
Q Consensus 293 ~~~~~~~~i~~fl~ 306 (318)
+++++.+.|.+|++
T Consensus 238 ~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 238 QPEAFNAALRDFLR 251 (251)
T ss_pred ChHHHHHHHHHHhC
Confidence 88899999999974
No 29
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=1.1e-26 Score=193.95 Aligned_cols=234 Identities=15% Similarity=0.168 Sum_probs=159.3
Q ss_pred CCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc----CCChhhhHHHH
Q 021050 67 NKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ----YGNYWREADDL 142 (318)
Q Consensus 67 ~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~----~~~~~~~~~d~ 142 (318)
+.+|.++.+...+++++|+|||+||++++. ..|..+++.|++ +|+|+++|+||||.|+.+.. ..++..+++|+
T Consensus 111 ~~~~~~~~y~~~G~~~~~~ivllHG~~~~~--~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 111 SSDLFRWFCVESGSNNNPPVLLIHGFPSQA--YSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred cCCceEEEEEecCCCCCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 457778876655555678999999999988 669999999976 69999999999999987643 35778889999
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc-hhhh---hhhHHHHHHHhc--------
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-GIED---RLGKDYMEKIMQ-------- 209 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~---~~~~~~~~~~~~-------- 209 (318)
.++++.+ +.++++|+|||+||.+++.+|.++|+ |+++|+++++..... .+.. .+.......+..
T Consensus 188 ~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~ 264 (383)
T PLN03084 188 ESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASD 264 (383)
T ss_pred HHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHh
Confidence 9999988 66789999999999999999999998 999999998753211 0110 000000000000
Q ss_pred cCCccccC--CC--------Ccceee----echHHHHHhhccCh---HHHhh----hccCCCcEEEEEcCCCCccCcchh
Q 021050 210 DGFIDVKN--KT--------GDVEYR----VTEESLMDRLNTNM---HDACL----QIDMECSVLTIHGSSDKIIPLQDA 268 (318)
Q Consensus 210 ~~~~~~~~--~~--------~~~~~~----~~~~~~~~~~~~~~---~~~~~----~~~~~~P~lii~g~~D~~~~~~~~ 268 (318)
..+..... .. ...... .....+...+.... ..... ..++++|+++++|++|.+++.+..
T Consensus 265 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~ 344 (383)
T PLN03084 265 KALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGV 344 (383)
T ss_pred hhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHH
Confidence 00000000 00 000000 00000111111110 00011 124689999999999999999888
Q ss_pred HHHHhhCCCCEEEEECCCCccCC-CChHHHHHHHHHHHHh
Q 021050 269 HEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 307 (318)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 307 (318)
+.+.+. .+.++.+++++||+++ +.++++.+.|.+||.+
T Consensus 345 ~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 345 EDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 888877 4889999999999975 7789999999999863
No 30
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=1.1e-26 Score=196.69 Aligned_cols=235 Identities=16% Similarity=0.140 Sum_probs=159.1
Q ss_pred ceeEEEEeCCCCcEEEEEEecC---CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCCh
Q 021050 59 KQQELVIPNKYGERLVGVLHDA---ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY 135 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~ 135 (318)
..+.++|+..+|..+.++++.+ ++.|+||++||+++... ..|..+++.|+++||+|+++|+||+|.|.+.....+.
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~ 245 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDS 245 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchh-hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccH
Confidence 4589999998888999988744 35677777777766543 3577788999999999999999999999754321222
Q ss_pred hhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhh---hhhhHHHHHHHh
Q 021050 136 WREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE---DRLGKDYMEKIM 208 (318)
Q Consensus 136 ~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~ 208 (318)
.....++++++... +.++++++|||+||++++.+|..+|+ |+++|+++++........ ..........+.
T Consensus 246 ---~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la 322 (414)
T PRK05077 246 ---SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLA 322 (414)
T ss_pred ---HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHH
Confidence 22235677777665 56799999999999999999998886 999999998764211100 000000111111
Q ss_pred ccCCccccCCCCcceeeechHHHHHhhccChH--HHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCC
Q 021050 209 QDGFIDVKNKTGDVEYRVTEESLMDRLNTNMH--DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGA 286 (318)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (318)
.. +. .. ......+...+..... ......++++|+|+|+|++|+++|++.++.+.+..++.+++++|++
T Consensus 323 ~~-lg-~~--------~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~ 392 (414)
T PRK05077 323 SR-LG-MH--------DASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK 392 (414)
T ss_pred HH-hC-CC--------CCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC
Confidence 00 00 00 0011111111110000 0001125789999999999999999999999999999999999986
Q ss_pred CccCCCChHHHHHHHHHHHHhhc
Q 021050 287 NHGYTNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 287 gH~~~~~~~~~~~~i~~fl~~~~ 309 (318)
| ..+.++++.+.+.+||++++
T Consensus 393 -~-~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 393 -P-VYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred -C-ccCCHHHHHHHHHHHHHHHh
Confidence 3 24678999999999999875
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.95 E-value=1.1e-26 Score=187.04 Aligned_cols=213 Identities=17% Similarity=0.198 Sum_probs=138.4
Q ss_pred CCC-eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 81 ESS-EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 81 ~~~-~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
|++ |+||++||++++. ..|..+.+.|.++ |+|+++|+||||.|.... ..++.+.++++. .+ ..+++++
T Consensus 10 G~g~~~ivllHG~~~~~--~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~---~~~~~~l 78 (256)
T PRK10349 10 GQGNVHLVLLHGWGLNA--EVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQ---APDKAIW 78 (256)
T ss_pred CCCCCeEEEECCCCCCh--hHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hc---CCCCeEE
Confidence 444 4699999999998 6799999999776 999999999999998543 334444343332 22 5678999
Q ss_pred EEEechHHHHHHHHhhcCC-ccEEEEeccCccccc-----hhhhhhhHH-----------HHHHHhccCCccccCCCCc-
Q 021050 160 LGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-----GIEDRLGKD-----------YMEKIMQDGFIDVKNKTGD- 221 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~- 221 (318)
+||||||.+++.+|.++|+ |+++|++++...... ......... ....+..............
T Consensus 79 vGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T PRK10349 79 LGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDA 158 (256)
T ss_pred EEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHH
Confidence 9999999999999999998 999999987432210 000000000 0111100000000000000
Q ss_pred c-------e-eeechHHHH---Hh-hccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCcc
Q 021050 222 V-------E-YRVTEESLM---DR-LNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHG 289 (318)
Q Consensus 222 ~-------~-~~~~~~~~~---~~-~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 289 (318)
. . .......+. .. ...+... ...++++|+|+++|++|.++|.+.++.+.+.++++++.+++++||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~ 236 (256)
T PRK10349 159 RALKKTVLALPMPEVDVLNGGLEILKTVDLRQ--PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHA 236 (256)
T ss_pred HHHHHHhhccCCCcHHHHHHHHHHHHhCccHH--HHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCC
Confidence 0 0 000000000 00 0111111 1125799999999999999999999999999999999999999999
Q ss_pred C-CCChHHHHHHHHHHHH
Q 021050 290 Y-TNHQAELVSVVLDFVK 306 (318)
Q Consensus 290 ~-~~~~~~~~~~i~~fl~ 306 (318)
. .++++++.+.+.+|-+
T Consensus 237 ~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 237 PFISHPAEFCHLLVALKQ 254 (256)
T ss_pred ccccCHHHHHHHHHHHhc
Confidence 7 4788999999998854
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=7.4e-26 Score=185.31 Aligned_cols=233 Identities=18% Similarity=0.179 Sum_probs=148.9
Q ss_pred CCcEEEEEEec-CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc---CCChhhhHHHHHH
Q 021050 69 YGERLVGVLHD-AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ---YGNYWREADDLRA 144 (318)
Q Consensus 69 ~g~~l~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~---~~~~~~~~~d~~~ 144 (318)
+|..+.+.... ++.+++||++||++++.. ..+..+...+.+.||+|+++|+||+|.|..+.. ..++..+++|+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 10 DGGYHLFTKTGGEGEKIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEE 88 (288)
T ss_pred CCCeEEEEeccCCCCCCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHH
Confidence 45555554444 334789999999876663 356667777776699999999999999986532 2467888888888
Q ss_pred HHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhh------hhhhHHHHH---HHhccC-Cc
Q 021050 145 VVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE------DRLGKDYME---KIMQDG-FI 213 (318)
Q Consensus 145 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~-~~ 213 (318)
+++.+ +.++++++||||||.+++.+|..+|+ ++++|++++......... ..+...... ...... +.
T Consensus 89 ~~~~~---~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (288)
T TIGR01250 89 VREKL---GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYD 165 (288)
T ss_pred HHHHc---CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcc
Confidence 88877 66779999999999999999999998 999999887543221110 000000000 000000 00
Q ss_pred cc-----cCCCC---cceeeechHHHHH-----------hhc-----------cChHHHhhhccCCCcEEEEEcCCCCcc
Q 021050 214 DV-----KNKTG---DVEYRVTEESLMD-----------RLN-----------TNMHDACLQIDMECSVLTIHGSSDKII 263 (318)
Q Consensus 214 ~~-----~~~~~---~~~~~~~~~~~~~-----------~~~-----------~~~~~~~~~~~~~~P~lii~g~~D~~~ 263 (318)
.. ..... ............. .+. ..........++++|+++++|++|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~- 244 (288)
T TIGR01250 166 NPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM- 244 (288)
T ss_pred hHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-
Confidence 00 00000 0000000000000 000 00000011125789999999999985
Q ss_pred CcchhHHHHhhCCCCEEEEECCCCccC-CCChHHHHHHHHHHHH
Q 021050 264 PLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVSVVLDFVK 306 (318)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~ 306 (318)
++...+.+.+.+++.++++++++||+. .++++++.+.|.+||+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 245 TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 567788888888999999999999996 5788999999999984
No 33
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.95 E-value=7.7e-26 Score=180.60 Aligned_cols=211 Identities=15% Similarity=0.205 Sum_probs=137.2
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 162 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 162 (318)
+|+|||+||++++. ..|..+++.| + +|+|+++|+||||.|..+.. .++..+++|+.++++.+ +.++++++||
T Consensus 2 ~p~vvllHG~~~~~--~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~---~~~~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGLLGSG--QDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSY---NILPYWLVGY 73 (242)
T ss_pred CCEEEEECCCCCCh--HHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHc---CCCCeEEEEE
Confidence 57899999999999 6799999988 3 59999999999999986543 47788889998888877 6788999999
Q ss_pred echHHHHHHHHhhcC-C-ccEEEEeccCccccchhh---hhhh-HHHHHHHhccC-------------CccccCCCCcc-
Q 021050 163 SKGGSVVLLYASKYN-D-IRTFVNVSGRYDLKGGIE---DRLG-KDYMEKIMQDG-------------FIDVKNKTGDV- 222 (318)
Q Consensus 163 S~Gg~~a~~~a~~~p-~-v~~~v~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~- 222 (318)
||||.+++.+|.++| + |++++++++......... .... ..+...+.... +..........
T Consensus 74 S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (242)
T PRK11126 74 SLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQL 153 (242)
T ss_pred CHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHH
Confidence 999999999999985 4 999999887653322110 0000 00111100000 00000000000
Q ss_pred ---eeeechHHHHHhh-----ccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CCC
Q 021050 223 ---EYRVTEESLMDRL-----NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNH 293 (318)
Q Consensus 223 ---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~ 293 (318)
............+ ...........++++|+++++|++|..+. .+.+. .++++++++++||++ .++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 154 VAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHREN 227 (242)
T ss_pred HHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhC
Confidence 0000000000000 00000111123679999999999998652 23333 378999999999997 488
Q ss_pred hHHHHHHHHHHHHh
Q 021050 294 QAELVSVVLDFVKA 307 (318)
Q Consensus 294 ~~~~~~~i~~fl~~ 307 (318)
++++.+.|.+|+++
T Consensus 228 p~~~~~~i~~fl~~ 241 (242)
T PRK11126 228 PAAFAASLAQILRL 241 (242)
T ss_pred hHHHHHHHHHHHhh
Confidence 99999999999975
No 34
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=1.5e-25 Score=180.76 Aligned_cols=232 Identities=15% Similarity=0.148 Sum_probs=150.1
Q ss_pred CCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CCChhhhHHHHHHHHH
Q 021050 69 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVVQ 147 (318)
Q Consensus 69 ~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~~~~~~d~~~~i~ 147 (318)
+|.++.+. .+.+++|+|||+||++.+. +.|..+...|.++||+|+++|+||||.|..... ..++.+.++++.++++
T Consensus 5 ~~~~~~~~-~~~~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 5 NGEEVTDM-KPNRQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccc-cccCCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 45555532 2336788999999999998 569999999998899999999999998764432 3577777777777777
Q ss_pred HHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch-hhhhhhHHH--HHHHhcc---CCccccCCCC
Q 021050 148 YFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-IEDRLGKDY--MEKIMQD---GFIDVKNKTG 220 (318)
Q Consensus 148 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~~~~~--~~~~~~~---~~~~~~~~~~ 220 (318)
.+. ..++++|+||||||.++..++..+|+ |+++|++++....... ........+ ....... .+. ......
T Consensus 82 ~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (273)
T PLN02211 82 SLP--ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFG-LGPDQP 158 (273)
T ss_pred hcC--CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeec-cCCCCC
Confidence 652 24689999999999999999999998 9999999775321110 000000000 0000000 000 000000
Q ss_pred cceeeechHHHH----------------HhhccChHHHh-------hhccC-CCcEEEEEcCCCCccCcchhHHHHhhCC
Q 021050 221 DVEYRVTEESLM----------------DRLNTNMHDAC-------LQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKIIP 276 (318)
Q Consensus 221 ~~~~~~~~~~~~----------------~~~~~~~~~~~-------~~~~~-~~P~lii~g~~D~~~~~~~~~~~~~~~~ 276 (318)
........+... ........... ...++ ++|+++|.|++|..+|++..+.+.+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~ 238 (273)
T PLN02211 159 PTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP 238 (273)
T ss_pred CceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 000000000000 00000000000 00123 7899999999999999999999999999
Q ss_pred CCEEEEECCCCccC-CCChHHHHHHHHHHHHh
Q 021050 277 NHKLHVVEGANHGY-TNHQAELVSVVLDFVKA 307 (318)
Q Consensus 277 ~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 307 (318)
+.+++.++ +||.. ++.++++.+.|.++...
T Consensus 239 ~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 239 PSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 88999997 79996 58899999999887654
No 35
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=7.6e-26 Score=184.80 Aligned_cols=243 Identities=20% Similarity=0.225 Sum_probs=153.8
Q ss_pred eEEEEeCCCCc-EEEEEEecCC---------CCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCC
Q 021050 61 QELVIPNKYGE-RLVGVLHDAE---------SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGS 129 (318)
Q Consensus 61 ~~v~~~~~~g~-~l~~~~~~~~---------~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~ 129 (318)
+.+.+....|. .+...+++.. .+++||++||++++. ..|+.....|.+. |+.|+++|++|+|.++..
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~--~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~ 103 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASS--FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL 103 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCc--ccHhhhccccccccceEEEEEecCCCCcCCCC
Confidence 44555555553 5555555443 689999999999988 5699999999776 599999999999955433
Q ss_pred c-c-CCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEE---EeccCccccchhhhhhhHHH
Q 021050 130 F-Q-YGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFV---NVSGRYDLKGGIEDRLGKDY 203 (318)
Q Consensus 130 ~-~-~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v---~~~~~~~~~~~~~~~~~~~~ 203 (318)
. . ..+...+.+-+....... ...+++++|||+||.+|+.+|+.+|+ |++++ +++++...............
T Consensus 104 ~~~~~y~~~~~v~~i~~~~~~~---~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 104 PRGPLYTLRELVELIRRFVKEV---FVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCCCceehhHHHHHHHHHHHhh---cCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 3 2 233333344443333333 56679999999999999999999999 99999 66565543332211111111
Q ss_pred HH-----HHhccCCccccCC--------CCc---ceeeechHH-----------------HHHhhc---c-ChHHHhhhc
Q 021050 204 ME-----KIMQDGFIDVKNK--------TGD---VEYRVTEES-----------------LMDRLN---T-NMHDACLQI 246 (318)
Q Consensus 204 ~~-----~~~~~~~~~~~~~--------~~~---~~~~~~~~~-----------------~~~~~~---~-~~~~~~~~~ 246 (318)
.. ............. ... .......+. ..+.+. . +........
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 10 0000000000000 000 000000000 000000 0 011111112
Q ss_pred cCC-CcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCC-CChHHHHHHHHHHHHhh
Q 021050 247 DME-CSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKAS 308 (318)
Q Consensus 247 ~~~-~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 308 (318)
++. ||+++++|++|+++|.+.+..+.+.++++++++++++||..+ +.|+++++.|..|+.+.
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 445 999999999999999999999999999999999999999985 68899999999999875
No 36
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=2.4e-25 Score=184.38 Aligned_cols=242 Identities=20% Similarity=0.242 Sum_probs=157.8
Q ss_pred EeCCCCcEEEEEEecC-CCCeEEEEEccCCCCCCChh------------------------HHHHHHHHHHcCceEEEEc
Q 021050 65 IPNKYGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPS------------------------MVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 65 ~~~~~g~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~------------------------~~~~~~~l~~~G~~v~~~d 119 (318)
+.+.||..|.++.+.+ .++.+||++||++++....+ ...+++.|.++||.|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 4567899998887754 46789999999999885211 1468999999999999999
Q ss_pred CCCCCCCCCCcc----CCChhhhHHHHHHHHHHHHh-------------------C-C-CCcEEEEEEechHHHHHHHHh
Q 021050 120 FAGNGESEGSFQ----YGNYWREADDLRAVVQYFCG-------------------A-N-RAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 120 ~~g~G~s~~~~~----~~~~~~~~~d~~~~i~~l~~-------------------~-~-~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
+||||.|.+... ..++.+.++|+..+++.+.. . . ..+++|+||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 999999986421 24678889999999988754 1 2 357999999999999999886
Q ss_pred hcC---------CccEEEEeccCccccchh------hhhhhHHHH---HHHhccCCc-c--ccCC---------CCccee
Q 021050 175 KYN---------DIRTFVNVSGRYDLKGGI------EDRLGKDYM---EKIMQDGFI-D--VKNK---------TGDVEY 224 (318)
Q Consensus 175 ~~p---------~v~~~v~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~-~--~~~~---------~~~~~~ 224 (318)
+++ .++++|+++|...+.... ......... ..+...... . .... .....+
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY 241 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcccc
Confidence 542 388999999876432110 001111111 111111000 0 0000 000000
Q ss_pred --eechHHHHHhhccCh--HHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC--CCCEEEEECCCCccCCCC--hHH
Q 021050 225 --RVTEESLMDRLNTNM--HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII--PNHKLHVVEGANHGYTNH--QAE 296 (318)
Q Consensus 225 --~~~~~~~~~~~~~~~--~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~--~~~ 296 (318)
..+.......+.... .........++|+|+++|++|.+++++.++.+++.. ++++++++++++|.++.+ .++
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 011111111111100 011111223789999999999999999999888765 468999999999998643 578
Q ss_pred HHHHHHHHHH
Q 021050 297 LVSVVLDFVK 306 (318)
Q Consensus 297 ~~~~i~~fl~ 306 (318)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 37
>PRK07581 hypothetical protein; Validated
Probab=99.94 E-value=5.7e-26 Score=189.94 Aligned_cols=236 Identities=17% Similarity=0.134 Sum_probs=146.0
Q ss_pred CCcEEEEEEecC---CCCeEEEEEccCCCCCCChhHHHHH---HHHHHcCceEEEEcCCCCCCCCCCcc---CCChh---
Q 021050 69 YGERLVGVLHDA---ESSEIVVLCHGFRSTKDDPSMVNLA---VALQNEGISAFRFDFAGNGESEGSFQ---YGNYW--- 136 (318)
Q Consensus 69 ~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~---~~l~~~G~~v~~~d~~g~G~s~~~~~---~~~~~--- 136 (318)
+|.++++...++ ++.|+||++||++++... |..+. +.|...+|+|+++|+||||.|..+.. ..++.
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD--NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCccc--chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 566777665554 244677777777766532 43332 35655679999999999999975432 12222
Q ss_pred --hhHHHHHH----HHHHHHhCCCCcE-EEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHH------
Q 021050 137 --READDLRA----VVQYFCGANRAVG-AILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKD------ 202 (318)
Q Consensus 137 --~~~~d~~~----~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~------ 202 (318)
..++|+.+ +++.+ +.+++ +|+||||||++|+.+|.++|+ |+++|++++....... .......
T Consensus 102 ~~~~~~~~~~~~~~l~~~l---gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~-~~~~~~~~~~~l~ 177 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF---GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH-NFVFLEGLKAALT 177 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh---CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH-HHHHHHHHHHHHH
Confidence 24566665 44445 78885 799999999999999999999 9999999765432110 0000000
Q ss_pred ------------------------HH-----HHHhccC-Ccccc-----CC----CCcceeeechHHHHHh---hc----
Q 021050 203 ------------------------YM-----EKIMQDG-FIDVK-----NK----TGDVEYRVTEESLMDR---LN---- 236 (318)
Q Consensus 203 ------------------------~~-----~~~~~~~-~~~~~-----~~----~~~~~~~~~~~~~~~~---~~---- 236 (318)
.. ..+.... +.... .. ................ +.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 257 (339)
T PRK07581 178 ADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDI 257 (339)
T ss_pred hCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhccc
Confidence 00 0000000 00000 00 0000000000000000 00
Q ss_pred -cC----hHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECC-CCccC-CCChHHHHHHHHHHHHhhc
Q 021050 237 -TN----MHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEG-ANHGY-TNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 237 -~~----~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~-~~~~~~~~~~i~~fl~~~~ 309 (318)
.. ........++++|+|+|+|++|..+|++.++.+.+.+++++++++++ +||.. .++++++...|.+||++.+
T Consensus 258 ~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 258 SRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred ccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 00 00011122579999999999999999999999999999999999998 89985 5888999999999999876
Q ss_pred C
Q 021050 310 K 310 (318)
Q Consensus 310 ~ 310 (318)
.
T Consensus 338 ~ 338 (339)
T PRK07581 338 A 338 (339)
T ss_pred h
Confidence 4
No 38
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=6.2e-25 Score=181.91 Aligned_cols=248 Identities=16% Similarity=0.138 Sum_probs=156.8
Q ss_pred EEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhh
Q 021050 62 ELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWR 137 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~ 137 (318)
...+...||..+...+... +++|+||++||++++..+.+...+++.|.++||+|+++|+||||.+...........
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~ 112 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG 112 (324)
T ss_pred eeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC
Confidence 3445667887776555422 257899999999988654556778999999999999999999997764322211223
Q ss_pred hHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcC-C--ccEEEEeccCccccchhh-------hhhhHHHHHH
Q 021050 138 EADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYN-D--IRTFVNVSGRYDLKGGIE-------DRLGKDYMEK 206 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~~v~~~~~~~~~~~~~-------~~~~~~~~~~ 206 (318)
..+|+..+++++.+. +..+++++||||||.++..++++++ + +.++|+++++.+...... ......+...
T Consensus 113 ~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (324)
T PRK10985 113 ETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNL 192 (324)
T ss_pred chHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHH
Confidence 478999999998875 5568999999999998888887764 3 889999999876542211 1111111111
Q ss_pred Hhcc------CCccccCCCC-cceeeechH--------------HHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCc
Q 021050 207 IMQD------GFIDVKNKTG-DVEYRVTEE--------------SLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL 265 (318)
Q Consensus 207 ~~~~------~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~ 265 (318)
+... .+........ ......... ...+.+..... .....++++|+++|+|++|+++++
T Consensus 193 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~-~~~l~~i~~P~lii~g~~D~~~~~ 271 (324)
T PRK10985 193 LKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSA-LPLLNQIRKPTLIIHAKDDPFMTH 271 (324)
T ss_pred HHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCCh-HHHHhCCCCCEEEEecCCCCCCCh
Confidence 1100 0000000000 000000000 01111111010 111136799999999999999998
Q ss_pred chhHHHHhhCCCCEEEEECCCCccCC-CC----h-HHHHHHHHHHHHhhcC
Q 021050 266 QDAHEFDKIIPNHKLHVVEGANHGYT-NH----Q-AELVSVVLDFVKASLK 310 (318)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~gH~~~-~~----~-~~~~~~i~~fl~~~~~ 310 (318)
+....+.+..++.++.+++++||+.+ +. + ...-+.+.+|+....+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 272 EVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred hhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 88877777788899999999999954 22 1 3566778889876553
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.94 E-value=7.3e-27 Score=184.38 Aligned_cols=208 Identities=25% Similarity=0.355 Sum_probs=141.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc--CCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
|||+||++++. ..|..+++.|+ +||+|+++|+||+|.|..... ..++.+.++|+.++++.+ +.++++++|||
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---GIKKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT---TTSSEEEEEET
T ss_pred eEEECCCCCCH--HHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc---ccccccccccc
Confidence 79999999999 66999999995 789999999999999997653 456778888888888887 55789999999
Q ss_pred chHHHHHHHHhhcCC-ccEEEEeccCccccchh----hhhhhHHHH-------HHHhccCCccccCCC-CcceeeechHH
Q 021050 164 KGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI----EDRLGKDYM-------EKIMQDGFIDVKNKT-GDVEYRVTEES 230 (318)
Q Consensus 164 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (318)
+||.+++.++.++|+ |+++|++++........ ......... ..+....+....... ...........
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRA 154 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccc
Confidence 999999999999998 99999999987543211 001101000 001000000000000 00000001111
Q ss_pred HHHhhcc---ChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CCChHHHHH
Q 021050 231 LMDRLNT---NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVS 299 (318)
Q Consensus 231 ~~~~~~~---~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~ 299 (318)
+.+.+.. ..........+++|+++++|++|.+++.+..+.+.+.++++++++++++||++ .++++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 155 LAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHH
T ss_pred cccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhc
Confidence 1111111 00001112256999999999999999988999999999999999999999996 477777765
No 40
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.94 E-value=1.5e-25 Score=176.11 Aligned_cols=243 Identities=17% Similarity=0.194 Sum_probs=149.2
Q ss_pred ceeEEEEeCCCCcEEEEEEe--cCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChh
Q 021050 59 KQQELVIPNKYGERLVGVLH--DAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYW 136 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~ 136 (318)
..+.+.+. ++..+...-. ++....++|++||+|.+. -.|-.-.+.|++ .++|+++|++|+|.|+.+.-..+..
T Consensus 66 ~~~~v~i~--~~~~iw~~~~~~~~~~~~plVliHGyGAg~--g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~ 140 (365)
T KOG4409|consen 66 SKKYVRIP--NGIEIWTITVSNESANKTPLVLIHGYGAGL--GLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPT 140 (365)
T ss_pred ceeeeecC--CCceeEEEeecccccCCCcEEEEeccchhH--HHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcc
Confidence 34555554 4444443333 234678999999999988 567777788877 5999999999999999876443333
Q ss_pred hhHHHHHHHHH-HHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch------------hhh-----
Q 021050 137 READDLRAVVQ-YFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG------------IED----- 197 (318)
Q Consensus 137 ~~~~d~~~~i~-~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~------------~~~----- 197 (318)
.....+.+.|+ |-...+..+.+|+|||+||++|..+|.++|+ |+.+||++|....... +..
T Consensus 141 ~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~ 220 (365)
T KOG4409|consen 141 TAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLV 220 (365)
T ss_pred cchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhh
Confidence 33334444443 4344488999999999999999999999999 9999999986433211 000
Q ss_pred --------------hhhHHHHHHHhccCCccccCCCCcce-----e-----eechHH-HHHhhc------cChHHHhhhc
Q 021050 198 --------------RLGKDYMEKIMQDGFIDVKNKTGDVE-----Y-----RVTEES-LMDRLN------TNMHDACLQI 246 (318)
Q Consensus 198 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~-~~~~~~------~~~~~~~~~~ 246 (318)
.++..+...+....+........... + .-+-+. +...+. ..........
T Consensus 221 ~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l 300 (365)
T KOG4409|consen 221 ATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL 300 (365)
T ss_pred hhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh
Confidence 00111111111111111111000000 0 000000 000000 0111112223
Q ss_pred cCCCcEEEEEcCCCCccCcchhHHHHhh--CCCCEEEEECCCCccC-CCChHHHHHHHHHHHHh
Q 021050 247 DMECSVLTIHGSSDKIIPLQDAHEFDKI--IPNHKLHVVEGANHGY-TNHQAELVSVVLDFVKA 307 (318)
Q Consensus 247 ~~~~P~lii~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 307 (318)
+..+|+++|+|++|. ++.....++.+. ...++.+++|++||.. .++++.+.+.+..++++
T Consensus 301 ~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 301 KKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred ccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 447999999999995 455666666653 2358999999999995 68899999999999875
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=6e-25 Score=180.96 Aligned_cols=237 Identities=16% Similarity=0.137 Sum_probs=148.9
Q ss_pred EEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc--CCChhhhHHH
Q 021050 64 VIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADD 141 (318)
Q Consensus 64 ~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~--~~~~~~~~~d 141 (318)
.+...||.++.+...++.++++||++||++++... ..+...+...+|+|+++|+||||.|..... ..+..+.++|
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 84 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVAD 84 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 44446788888766555457789999998877632 234445545679999999999999986532 2355677888
Q ss_pred HHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhh-------hhhHHHHHHHhccC--
Q 021050 142 LRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED-------RLGKDYMEKIMQDG-- 211 (318)
Q Consensus 142 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-- 211 (318)
+..+++.+ +.++++++||||||.+++.++.++|+ |+++|++++.......... .........+....
T Consensus 85 l~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T TIGR01249 85 IEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPE 161 (306)
T ss_pred HHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCCh
Confidence 88888877 66789999999999999999999998 9999999875432211100 00000000000000
Q ss_pred -Cc--cc--------cCCC---------------Ccceeee---------chH--HHHHhh----------cc-ChHHHh
Q 021050 212 -FI--DV--------KNKT---------------GDVEYRV---------TEE--SLMDRL----------NT-NMHDAC 243 (318)
Q Consensus 212 -~~--~~--------~~~~---------------~~~~~~~---------~~~--~~~~~~----------~~-~~~~~~ 243 (318)
.. .. .... ....... ... .....+ .. ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
T TIGR01249 162 NERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILD 241 (306)
T ss_pred hhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHH
Confidence 00 00 0000 0000000 000 000000 00 000000
Q ss_pred hhccC-CCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHHHhh
Q 021050 244 LQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 244 ~~~~~-~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 308 (318)
...++ ++|+|+++|++|.++|.+.++.+++.++++++++++++||..+ .++..+.|.+|+...
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAF--DPNNLAALVHALETY 305 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCC--ChHHHHHHHHHHHHh
Confidence 11234 5899999999999999999999999999999999999999975 344567777777654
No 42
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=5.7e-25 Score=166.29 Aligned_cols=214 Identities=19% Similarity=0.243 Sum_probs=163.7
Q ss_pred eEEEEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCCCChhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCccCCChhh
Q 021050 61 QELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQYGNYWR 137 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~g~G~s~~~~~~~~~~~ 137 (318)
+-+..++..|..+.+.+..+. ..+++++.||...+.. ....+...|.. -+++++.+||+|+|.|.+.+.+.+
T Consensus 36 ~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n--- 110 (258)
T KOG1552|consen 36 EVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERN--- 110 (258)
T ss_pred ceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchH--HHHHHHHHHhhcccceEEEEecccccccCCCccccc---
Confidence 566777788888888777654 3589999999966653 24444445544 269999999999999999887654
Q ss_pred hHHHHHHHHHHHHhCC--CCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccc
Q 021050 138 EADDLRAVVQYFCGAN--RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDV 215 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
..+|+.++.++|++.. .++++|+|+|+|+..++.+|++.| ++++|+.+|..+..+.+.... ...
T Consensus 111 ~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~------------~~~- 176 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDT------------KTT- 176 (258)
T ss_pred chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCc------------ceE-
Confidence 4889999999999884 589999999999999999999999 999999999765443322110 000
Q ss_pred cCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCC-EEEEECCCCccCCCCh
Q 021050 216 KNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH-KLHVVEGANHGYTNHQ 294 (318)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~ 294 (318)
+.+ +.+.. ......++||+|++||++|++++..+..++++..+++ +-.++.|+||.-.+..
T Consensus 177 --------~~~------d~f~~----i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~ 238 (258)
T KOG1552|consen 177 --------YCF------DAFPN----IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELY 238 (258)
T ss_pred --------Eee------ccccc----cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccC
Confidence 000 00000 0011157999999999999999999999999999875 8888999999988888
Q ss_pred HHHHHHHHHHHHhhcCC
Q 021050 295 AELVSVVLDFVKASLKQ 311 (318)
Q Consensus 295 ~~~~~~i~~fl~~~~~~ 311 (318)
+++.+.+..|+......
T Consensus 239 ~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 239 PEYIEHLRRFISSVLPS 255 (258)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999999876554
No 43
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=1.7e-25 Score=186.96 Aligned_cols=236 Identities=19% Similarity=0.190 Sum_probs=148.1
Q ss_pred CCCcEEEEEEecCCCCeEEEEEccCCCCCCC----------hhHHHHHH---HHHHcCceEEEEcCCCCCCCCCCccCCC
Q 021050 68 KYGERLVGVLHDAESSEIVVLCHGFRSTKDD----------PSMVNLAV---ALQNEGISAFRFDFAGNGESEGSFQYGN 134 (318)
Q Consensus 68 ~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~----------~~~~~~~~---~l~~~G~~v~~~d~~g~G~s~~~~~~~~ 134 (318)
.+|.++.+...++++. ++|++||++++... ..|..+.. .|...+|+|+++|+||||.|... ..+
T Consensus 43 ~~~~~l~y~~~G~~~~-p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~ 119 (343)
T PRK08775 43 LEDLRLRYELIGPAGA-PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--PID 119 (343)
T ss_pred CCCceEEEEEeccCCC-CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--CCC
Confidence 3677777665544333 46777666655531 04777775 56444699999999999988532 346
Q ss_pred hhhhHHHHHHHHHHHHhCCCCcE-EEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhh--HH--------
Q 021050 135 YWREADDLRAVVQYFCGANRAVG-AILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG--KD-------- 202 (318)
Q Consensus 135 ~~~~~~d~~~~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~-------- 202 (318)
+.++++|+.++++.+ +.+++ +|+||||||++|+.+|.++|+ |+++|++++............. ..
T Consensus 120 ~~~~a~dl~~ll~~l---~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (343)
T PRK08775 120 TADQADAIALLLDAL---GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQ 196 (343)
T ss_pred HHHHHHHHHHHHHHc---CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCC
Confidence 677899999999888 66554 799999999999999999998 9999999876432211000000 00
Q ss_pred --------HHHHHhccCCc------cccCCCCcc----eeeechH-------HHHHhhccC----hH-----HHhhhccC
Q 021050 203 --------YMEKIMQDGFI------DVKNKTGDV----EYRVTEE-------SLMDRLNTN----MH-----DACLQIDM 248 (318)
Q Consensus 203 --------~~~~~~~~~~~------~~~~~~~~~----~~~~~~~-------~~~~~~~~~----~~-----~~~~~~~~ 248 (318)
.........+. ......... ....... ......... .. ......++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 276 (343)
T PRK08775 197 CAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAI 276 (343)
T ss_pred CCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcC
Confidence 00000000000 000000000 0000000 000000000 00 00011367
Q ss_pred CCcEEEEEcCCCCccCcchhHHHHhhC-CCCEEEEECC-CCccC-CCChHHHHHHHHHHHHhhc
Q 021050 249 ECSVLTIHGSSDKIIPLQDAHEFDKII-PNHKLHVVEG-ANHGY-TNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 249 ~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~-~~~~~~~~~~i~~fl~~~~ 309 (318)
++|+|+++|++|.++|++..+.+.+.+ ++++++++++ +||.. .++++++.+.|.+||++.-
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999898898887 6899999985 99996 5899999999999998653
No 44
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=1e-24 Score=176.20 Aligned_cols=241 Identities=22% Similarity=0.295 Sum_probs=152.8
Q ss_pred eEEEEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCC--CChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChh
Q 021050 61 QELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTK--DDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYW 136 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~ 136 (318)
+.+.++. +|.++.++++.+. +++.||++||+.... ....+..+++.|+++||+|+++|+||||.|.+.. .++.
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~ 79 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFE 79 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHH
Confidence 5677775 5778888877554 456788888765422 1134677899999999999999999999997643 3567
Q ss_pred hhHHHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhh-hhhHHHHHHHhccCCc
Q 021050 137 READDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIED-RLGKDYMEKIMQDGFI 213 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 213 (318)
.+.+|+.+++++++.. +.++++++|||+||.+++.+|...+.|+++|+++|+......... .....+........+.
T Consensus 80 ~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (274)
T TIGR03100 80 GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFW 159 (274)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHH
Confidence 7789999999999765 457899999999999999998765669999999987543321111 1111111111111000
Q ss_pred cccCCCCcceeeechHHHHH----h-----------hccChHHHhhhccCCCcEEEEEcCCCCccCcch-----hHHHHh
Q 021050 214 DVKNKTGDVEYRVTEESLMD----R-----------LNTNMHDACLQIDMECSVLTIHGSSDKIIPLQD-----AHEFDK 273 (318)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~-----~~~~~~ 273 (318)
... ..+...+......+.. . ...+..... ..+++|+++++|++|...+.-. ...+.+
T Consensus 160 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~ 236 (274)
T TIGR03100 160 RKL-LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGL--ERFQGPVLFILSGNDLTAQEFADSVLGEPAWRG 236 (274)
T ss_pred HHh-cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHH--HhcCCcEEEEEcCcchhHHHHHHHhccChhhHH
Confidence 000 0000000000001110 0 000001111 1558999999999998864211 134444
Q ss_pred hC--CCCEEEEECCCCccCC-CC-hHHHHHHHHHHHHh
Q 021050 274 II--PNHKLHVVEGANHGYT-NH-QAELVSVVLDFVKA 307 (318)
Q Consensus 274 ~~--~~~~~~~~~~~gH~~~-~~-~~~~~~~i~~fl~~ 307 (318)
.+ ++++++.+++++|++. +. ++++.+.|.+||++
T Consensus 237 ~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 237 ALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 44 7899999999999974 43 37899999999963
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.94 E-value=1.6e-25 Score=178.91 Aligned_cols=209 Identities=21% Similarity=0.266 Sum_probs=135.9
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
|+||++||++++. ..|..+++.|.+ +|+|+++|+||+|.|.... ..++.+.++++.+. ..++++++|||
T Consensus 5 ~~iv~~HG~~~~~--~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~-------~~~~~~lvG~S 73 (245)
T TIGR01738 5 VHLVLIHGWGMNA--EVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQ-------APDPAIWLGWS 73 (245)
T ss_pred ceEEEEcCCCCch--hhHHHHHHhhcc-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHh-------CCCCeEEEEEc
Confidence 7899999999988 568999999975 5999999999999987543 23444434433321 23579999999
Q ss_pred chHHHHHHHHhhcCC-ccEEEEeccCccccc--hhh----hhhhHHHH-----------HHHhccCCccccCCCCcc---
Q 021050 164 KGGSVVLLYASKYND-IRTFVNVSGRYDLKG--GIE----DRLGKDYM-----------EKIMQDGFIDVKNKTGDV--- 222 (318)
Q Consensus 164 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~~~~--- 222 (318)
|||.+++.+|.++|+ ++++|++++...... .+. ......+. ..+...............
T Consensus 74 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T TIGR01738 74 LGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARAL 153 (245)
T ss_pred HHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 999999999999999 999999877543211 010 00000000 000000000000000000
Q ss_pred ----eeeec--hHHHHHh---h-ccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-C
Q 021050 223 ----EYRVT--EESLMDR---L-NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-T 291 (318)
Q Consensus 223 ----~~~~~--~~~~~~~---~-~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~ 291 (318)
..... ...+... + ..+... ...++++|+++++|++|.+++++..+.+.+.++++++++++++||+. .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 231 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQ--PLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFL 231 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHH--HHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccc
Confidence 00000 0000000 0 011111 12367999999999999999999999999999999999999999996 5
Q ss_pred CChHHHHHHHHHHH
Q 021050 292 NHQAELVSVVLDFV 305 (318)
Q Consensus 292 ~~~~~~~~~i~~fl 305 (318)
++++++.+.|.+|+
T Consensus 232 e~p~~~~~~i~~fi 245 (245)
T TIGR01738 232 SHAEAFCALLVAFK 245 (245)
T ss_pred cCHHHHHHHHHhhC
Confidence 88999999999985
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=2e-25 Score=189.50 Aligned_cols=230 Identities=20% Similarity=0.252 Sum_probs=149.7
Q ss_pred CCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHH
Q 021050 69 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY 148 (318)
Q Consensus 69 ~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~ 148 (318)
++..+.+...+++++++|||+||++++. ..|..+.+.|.+. |+|+++|+||||.|.......++.+.++++..+++.
T Consensus 117 ~~~~i~~~~~g~~~~~~vl~~HG~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 193 (371)
T PRK14875 117 GGRTVRYLRLGEGDGTPVVLIHGFGGDL--NNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA 193 (371)
T ss_pred cCcEEEEecccCCCCCeEEEECCCCCcc--chHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 4666765544555678999999999998 4588888888765 999999999999997655556777888888888776
Q ss_pred HHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch---hhhhh----hHHHHHHHhccCCccccCCCC
Q 021050 149 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG---IEDRL----GKDYMEKIMQDGFIDVKNKTG 220 (318)
Q Consensus 149 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~ 220 (318)
+ +..+++++|||+||.+++.+|..+|+ +.++|++++....... +...+ ............+........
T Consensus 194 ~---~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
T PRK14875 194 L---GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTR 270 (371)
T ss_pred c---CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCH
Confidence 6 66789999999999999999999987 9999999876432211 00000 000000000000000000000
Q ss_pred cc-----ee---eech---HHHHHh-hcc---ChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECC
Q 021050 221 DV-----EY---RVTE---ESLMDR-LNT---NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEG 285 (318)
Q Consensus 221 ~~-----~~---~~~~---~~~~~~-~~~---~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (318)
.. .. .... ..+... +.. .........++++|+++++|++|..+|++.++.+. .+.++.++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~ 347 (371)
T PRK14875 271 QMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPG 347 (371)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CCCeEEEeCC
Confidence 00 00 0000 000000 000 00001112256999999999999999887765543 4689999999
Q ss_pred CCccC-CCChHHHHHHHHHHHHh
Q 021050 286 ANHGY-TNHQAELVSVVLDFVKA 307 (318)
Q Consensus 286 ~gH~~-~~~~~~~~~~i~~fl~~ 307 (318)
+||+. .++++++.+.|.+||++
T Consensus 348 ~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 348 AGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCChhhhCHHHHHHHHHHHhcc
Confidence 99996 47888999999999975
No 47
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=2.3e-25 Score=178.38 Aligned_cols=217 Identities=21% Similarity=0.301 Sum_probs=140.1
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc--CCChhhhHHH-HHHHHHHHHhCCCCcEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADD-LRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~--~~~~~~~~~d-~~~~i~~l~~~~~~~i~l 159 (318)
+|+||++||++++. ..|..+++.|+ +||+|+++|+||+|.|+.+.. ..++.+.+++ +..+++.+ +.+++++
T Consensus 1 ~~~vv~~hG~~~~~--~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGFLGSG--ADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL---GIEPFFL 74 (251)
T ss_pred CCEEEEEcCCCCch--hhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc---CCCeEEE
Confidence 47899999999998 55899999998 789999999999999976532 3455566666 55555554 6678999
Q ss_pred EEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhh----hHHHHHHHhccCCccc---------cCC---CCcc
Q 021050 160 LGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRL----GKDYMEKIMQDGFIDV---------KNK---TGDV 222 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~---~~~~ 222 (318)
+|||+||.+++.+|.++|+ |++++++++............ ...+...+........ ... ....
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred EEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 9999999999999999998 999999987654332111000 0000001100000000 000 0000
Q ss_pred ee--------eechHHHHHhhc-----cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCcc
Q 021050 223 EY--------RVTEESLMDRLN-----TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHG 289 (318)
Q Consensus 223 ~~--------~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 289 (318)
.. ..........+. ..........++++|+++++|++|..++ +..+.+.+..+++++++++++||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 233 (251)
T TIGR03695 155 QRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHN 233 (251)
T ss_pred HhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCC
Confidence 00 000000000000 0000001112578999999999998764 556778888889999999999999
Q ss_pred C-CCChHHHHHHHHHHHH
Q 021050 290 Y-TNHQAELVSVVLDFVK 306 (318)
Q Consensus 290 ~-~~~~~~~~~~i~~fl~ 306 (318)
+ .++++++.+.|.+||+
T Consensus 234 ~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 234 IHLENPEAFAKILLAFLE 251 (251)
T ss_pred cCccChHHHHHHHHHHhC
Confidence 6 4788899999999983
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=6.1e-24 Score=180.09 Aligned_cols=237 Identities=17% Similarity=0.123 Sum_probs=140.9
Q ss_pred EEEEEEec-CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC-CChhhhHHH-HHHHHHH
Q 021050 72 RLVGVLHD-AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY-GNYWREADD-LRAVVQY 148 (318)
Q Consensus 72 ~l~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~-~~~~~~~~d-~~~~i~~ 148 (318)
.+....++ ++++|+||++||++++. ..|...+..|.++ |+|+++|+||||.|+.+... .+.....+. +..+.++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 169 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQ--GFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEW 169 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcch--hHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 45444443 34679999999999887 4577777888765 99999999999999765322 111111111 1223333
Q ss_pred HHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch--hhhhh---hHH--------------------
Q 021050 149 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG--IEDRL---GKD-------------------- 202 (318)
Q Consensus 149 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~~---~~~-------------------- 202 (318)
+...+.++++++||||||.+++.+|.++|+ |+++|++++....... ..... ...
T Consensus 170 ~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 249 (402)
T PLN02894 170 RKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKII 249 (402)
T ss_pred HHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHH
Confidence 333377789999999999999999999998 9999999875322111 00000 000
Q ss_pred ---------HHHHHhccCCccccCC--CCcceee-e------------chHHHHHhhcc-----ChHHHhhhccCCCcEE
Q 021050 203 ---------YMEKIMQDGFIDVKNK--TGDVEYR-V------------TEESLMDRLNT-----NMHDACLQIDMECSVL 253 (318)
Q Consensus 203 ---------~~~~~~~~~~~~~~~~--~~~~~~~-~------------~~~~~~~~~~~-----~~~~~~~~~~~~~P~l 253 (318)
.........+...... ....... . ..+........ .........++++|++
T Consensus 250 ~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~l 329 (402)
T PLN02894 250 RGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTT 329 (402)
T ss_pred HhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEE
Confidence 0000000000000000 0000000 0 00000000000 0000011125789999
Q ss_pred EEEcCCCCccCcchhHHHHhhCC-CCEEEEECCCCccC-CCChHHHHHHHHHHHHhhcCCC
Q 021050 254 TIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHGY-TNHQAELVSVVLDFVKASLKQD 312 (318)
Q Consensus 254 ii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~~~ 312 (318)
+++|++|.+.+ .....+.+..+ .+++++++++||+. .++++++.+.+.+|++..+...
T Consensus 330 iI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 330 FIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred EEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 99999998764 55555555553 58999999999996 5888999999999999888764
No 49
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.93 E-value=6.2e-25 Score=184.19 Aligned_cols=235 Identities=16% Similarity=0.219 Sum_probs=149.9
Q ss_pred CCcEEEEEEecC---CCCeEEEEEccCCCCCCCh---------hHHHHH---HHHHHcCceEEEEcCCC--CCCCCCC--
Q 021050 69 YGERLVGVLHDA---ESSEIVVLCHGFRSTKDDP---------SMVNLA---VALQNEGISAFRFDFAG--NGESEGS-- 129 (318)
Q Consensus 69 ~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~~g--~G~s~~~-- 129 (318)
+|.++.+..+++ +++++||++||++++.... .|..++ +.|...+|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 577788777764 3468999999999976321 366664 35556679999999999 5655421
Q ss_pred ----------ccCCChhhhHHHHHHHHHHHHhCCCCc-EEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchh--
Q 021050 130 ----------FQYGNYWREADDLRAVVQYFCGANRAV-GAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI-- 195 (318)
Q Consensus 130 ----------~~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-- 195 (318)
....++.++++|+.++++.+ +.++ ++++||||||.+++.+|.++|+ |+++|++++........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 01246678889999988887 7778 9999999999999999999998 99999999865432211
Q ss_pred -hhhhhHHH-----------------------HHHHhcc----------CCccccCCCCcce----eeechHHH------
Q 021050 196 -EDRLGKDY-----------------------MEKIMQD----------GFIDVKNKTGDVE----YRVTEESL------ 231 (318)
Q Consensus 196 -~~~~~~~~-----------------------~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~------ 231 (318)
........ ...+... .+........... .....+..
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 00000000 0000000 0000000000000 00000000
Q ss_pred --HHhhcc-------------ChH-----HHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEE-----EECCC
Q 021050 232 --MDRLNT-------------NMH-----DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLH-----VVEGA 286 (318)
Q Consensus 232 --~~~~~~-------------~~~-----~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 286 (318)
...... +.. ......+|++|+|+|+|++|.++|++.++.+.+.+++.+++ +++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~ 330 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPY 330 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCC
Confidence 000000 000 01112267899999999999999999999999999987665 55789
Q ss_pred CccC-CCChHHHHHHHHHHHH
Q 021050 287 NHGY-TNHQAELVSVVLDFVK 306 (318)
Q Consensus 287 gH~~-~~~~~~~~~~i~~fl~ 306 (318)
||.. .++++++.+.|.+||+
T Consensus 331 GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 331 GHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CcchhhcCHHHHHHHHHHHhC
Confidence 9996 5889999999999984
No 50
>PRK10566 esterase; Provisional
Probab=99.93 E-value=3.3e-24 Score=171.78 Aligned_cols=206 Identities=16% Similarity=0.194 Sum_probs=134.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCCh-------hhhHHHHHHHHHHHHhC--
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY-------WREADDLRAVVQYFCGA-- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~-------~~~~~d~~~~i~~l~~~-- 152 (318)
+.|+||++||++++.. .+..+++.|+++||.|+++|+||+|.+........+ ....+|+.++++++..+
T Consensus 26 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKL--VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccc--hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999998884 588899999999999999999999976422111111 23357778888888765
Q ss_pred -CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHH
Q 021050 153 -NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 231 (318)
Q Consensus 153 -~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
+.++++++|||+||.+++.++.++|++.+.+.+.+..... . ............ ... ... .....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~----~~~-~~~-~~~~~ 168 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFT-S--------LARTLFPPLIPE----TAA-QQA-EFNNI 168 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHH-H--------HHHHhccccccc----ccc-cHH-HHHHH
Confidence 4578999999999999999999999866555443321110 0 000000000000 000 000 00000
Q ss_pred HHhh-ccChHHHhhhccC-CCcEEEEEcCCCCccCcchhHHHHhhCCC------CEEEEECCCCccCCCChHHHHHHHHH
Q 021050 232 MDRL-NTNMHDACLQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKIIPN------HKLHVVEGANHGYTNHQAELVSVVLD 303 (318)
Q Consensus 232 ~~~~-~~~~~~~~~~~~~-~~P~lii~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~~~~~~~i~~ 303 (318)
...+ ..+.... ..++ ++|+|+++|++|.++|++.++.+.+.++. ++++.++++||.+. ++..+.+.+
T Consensus 169 ~~~~~~~~~~~~--~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~ 243 (249)
T PRK10566 169 VAPLAEWEVTHQ--LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVA 243 (249)
T ss_pred HHHHhhcChhhh--hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHH
Confidence 1111 1111111 1133 68999999999999999999998886642 57778999999974 467899999
Q ss_pred HHHhhc
Q 021050 304 FVKASL 309 (318)
Q Consensus 304 fl~~~~ 309 (318)
||++++
T Consensus 244 fl~~~~ 249 (249)
T PRK10566 244 FFRQHL 249 (249)
T ss_pred HHHhhC
Confidence 998764
No 51
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=3e-24 Score=181.35 Aligned_cols=239 Identities=14% Similarity=0.170 Sum_probs=150.9
Q ss_pred CCcEEEEEEecC---CCCeEEEEEccCCCCCCCh-----------hHHHHH---HHHHHcCceEEEEcCCCC-CCCCCCc
Q 021050 69 YGERLVGVLHDA---ESSEIVVLCHGFRSTKDDP-----------SMVNLA---VALQNEGISAFRFDFAGN-GESEGSF 130 (318)
Q Consensus 69 ~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~-----------~~~~~~---~~l~~~G~~v~~~d~~g~-G~s~~~~ 130 (318)
+|.++.|..++. +.+|+||++||++++...+ .|..++ ..|...+|+|+++|++|+ |.|.++.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 455566665553 2368999999999988421 255554 234345799999999983 4443221
Q ss_pred --------------cCCChhhhHHHHHHHHHHHHhCCCCc-EEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch
Q 021050 131 --------------QYGNYWREADDLRAVVQYFCGANRAV-GAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG 194 (318)
Q Consensus 131 --------------~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~ 194 (318)
...++.++++++.++++.+ +.++ ++++||||||.+++.+|.++|+ |+++|++++.......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 1346788899999999988 7778 4899999999999999999999 9999999876543211
Q ss_pred ---hhhhhhHHHH------------------------HH---Hh-------ccCCccccCCCCc-c--eeeechHHH---
Q 021050 195 ---IEDRLGKDYM------------------------EK---IM-------QDGFIDVKNKTGD-V--EYRVTEESL--- 231 (318)
Q Consensus 195 ---~~~~~~~~~~------------------------~~---~~-------~~~~~~~~~~~~~-~--~~~~~~~~~--- 231 (318)
+......... .. .. ...+......... . ......+.+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 0000000000 00 00 0000000000000 0 000000000
Q ss_pred -----HHhhcc-------------Ch------HHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCC----EEEEE
Q 021050 232 -----MDRLNT-------------NM------HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH----KLHVV 283 (318)
Q Consensus 232 -----~~~~~~-------------~~------~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~----~~~~~ 283 (318)
...... +. .......+|++|+|+|+|++|.++|++.++.+.+.+++. +++++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i 347 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI 347 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 000000 00 001112367999999999999999999999999999876 77777
Q ss_pred C-CCCccC-CCChHHHHHHHHHHHHhhcC
Q 021050 284 E-GANHGY-TNHQAELVSVVLDFVKASLK 310 (318)
Q Consensus 284 ~-~~gH~~-~~~~~~~~~~i~~fl~~~~~ 310 (318)
+ ++||.. +++++++.+.|.+||++...
T Consensus 348 ~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 348 DSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred CCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 5 899996 58899999999999988543
No 52
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=5.4e-24 Score=189.56 Aligned_cols=237 Identities=21% Similarity=0.253 Sum_probs=164.4
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC------CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~------~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 132 (318)
..+.+++++.||.++.++++.|. +-|+||++||.+.....+.+....+.|+.+||.|+.+|+||.+........
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 67999999999999999988653 138999999998666545678888999999999999999986443211110
Q ss_pred ----CChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHH
Q 021050 133 ----GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYME 205 (318)
Q Consensus 133 ----~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 205 (318)
..-....+|+.++++++.+. +.+|++|+|+|+||+++++++.+.|.+++.+...+..+......... ..+..
T Consensus 444 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~-~~~~~ 522 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGEST-EGLRF 522 (620)
T ss_pred hhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccc-hhhcC
Confidence 11123478999999988766 56799999999999999999999998888877766544322111100 00000
Q ss_pred HHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEE
Q 021050 206 KIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLH 281 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~ 281 (318)
.. ......... ..+.+. ....... ..++++|+|+|||++|..|+.++++.+.+.+. +++++
T Consensus 523 ~~---------~~~~~~~~~-~~~~~~---~~sp~~~--~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~ 587 (620)
T COG1506 523 DP---------EENGGGPPE-DREKYE---DRSPIFY--ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELV 587 (620)
T ss_pred CH---------HHhCCCccc-ChHHHH---hcChhhh--hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEE
Confidence 00 000000000 000111 1111111 12679999999999999999999998887764 47999
Q ss_pred EECCCCccCC--CChHHHHHHHHHHHHhhcCC
Q 021050 282 VVEGANHGYT--NHQAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 282 ~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~ 311 (318)
++|+.+|.+. ++...+.+.+.+|++++++.
T Consensus 588 ~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 588 VFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 9999999984 45567899999999998864
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.92 E-value=2e-23 Score=158.55 Aligned_cols=186 Identities=15% Similarity=0.187 Sum_probs=128.1
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILG 161 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 161 (318)
|+||++||++++..++....+.+.+.+. +|+|+++|+||++ .+.++++.++++.+ +.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~---~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEH---GGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHc---CCCCeEEEE
Confidence 6899999999999653323456777653 6999999999984 23466676676655 667899999
Q ss_pred EechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHH
Q 021050 162 HSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHD 241 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
|||||.+++.+|.++| . .+|+++|.......+.. +....... .....+.++...+.+....+...
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~ 132 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTD---------YLGENENP----YTGQQYVLESRHIYDLKVMQIDP 132 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHH---------hcCCcccc----cCCCcEEEcHHHHHHHHhcCCcc
Confidence 9999999999999998 3 46788887653222111 11111000 01111334444444332222111
Q ss_pred HhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHHH
Q 021050 242 ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVK 306 (318)
Q Consensus 242 ~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 306 (318)
.+.++|+++++|++|+++|++.+.++++. ++.++++|++|.+. +.+++.+.|.+|+.
T Consensus 133 ----i~~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f~-~~~~~~~~i~~fl~ 189 (190)
T PRK11071 133 ----LESPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAFV-GFERYFNQIVDFLG 189 (190)
T ss_pred ----CCChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcchh-hHHHhHHHHHHHhc
Confidence 23577899999999999999999999884 56778899999984 33788999999975
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=4.4e-23 Score=185.41 Aligned_cols=236 Identities=18% Similarity=0.161 Sum_probs=150.2
Q ss_pred eCCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc--cCCChhhhHHHHH
Q 021050 66 PNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYGNYWREADDLR 143 (318)
Q Consensus 66 ~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~--~~~~~~~~~~d~~ 143 (318)
...+|..+.++.++++++|+|||+||++++. ..|..+.+.| ..||+|+++|+||||.|.... ...++..+++|+.
T Consensus 8 ~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~ 84 (582)
T PRK05855 8 VSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH--EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFA 84 (582)
T ss_pred EeeCCEEEEEEEcCCCCCCeEEEEcCCCchH--HHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 3458889998877766789999999999988 6699999999 567999999999999998643 2356888999999
Q ss_pred HHHHHHHhCCCC-cEEEEEEechHHHHHHHHhhc--CC-ccEEEEeccCcccc-chh-hhhh-------hHHHHHHHhc-
Q 021050 144 AVVQYFCGANRA-VGAILGHSKGGSVVLLYASKY--ND-IRTFVNVSGRYDLK-GGI-EDRL-------GKDYMEKIMQ- 209 (318)
Q Consensus 144 ~~i~~l~~~~~~-~i~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~-~~~-~~~~-------~~~~~~~~~~- 209 (318)
.+++.+ +.. +++|+||||||.+++.++... ++ +..++.++++.... ... .... .......+..
T Consensus 85 ~~i~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (582)
T PRK05855 85 AVIDAV---SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRS 161 (582)
T ss_pred HHHHHh---CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhh
Confidence 999987 444 499999999999998887763 22 44444444322100 000 0000 0000000000
Q ss_pred -------c-CCccc-------------cCCCCcceee-e-----------chHHHHHhhccChHHHhhhccCCCcEEEEE
Q 021050 210 -------D-GFIDV-------------KNKTGDVEYR-V-----------TEESLMDRLNTNMHDACLQIDMECSVLTIH 256 (318)
Q Consensus 210 -------~-~~~~~-------------~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 256 (318)
. ..... .......... . ....+...... .........+++|+++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~lii~ 240 (582)
T PRK05855 162 WYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIR-SLSRPRERYTDVPVQLIV 240 (582)
T ss_pred HHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhh-hhccCccCCccCceEEEE
Confidence 0 00000 0000000000 0 00000000000 000000113689999999
Q ss_pred cCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CCChHHHHHHHHHHHHhhc
Q 021050 257 GSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~ 309 (318)
|++|.+++++..+.+.+.+++.++++++ +||+. .++++++.+.|.+|+.+.-
T Consensus 241 G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 241 PTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999999999988888888888888887 58996 5788899999999998743
No 55
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.91 E-value=1.8e-22 Score=195.82 Aligned_cols=227 Identities=17% Similarity=0.217 Sum_probs=148.2
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc--------cCCChhhhHHHHHHHHHHHHhCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--------QYGNYWREADDLRAVVQYFCGAN 153 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~--------~~~~~~~~~~d~~~~i~~l~~~~ 153 (318)
++++|||+||++++. ..|..+.+.|.+. |+|+++|+||||.|.... ...+++..++++.++++.+ +
T Consensus 1370 ~~~~vVllHG~~~s~--~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~ 1443 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTG--EDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---T 1443 (1655)
T ss_pred CCCeEEEECCCCCCH--HHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---C
Confidence 468999999999999 5689999999764 999999999999987532 1245677788888888877 6
Q ss_pred CCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhh----HHHHH--------HHhccCCccc----c
Q 021050 154 RAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG----KDYME--------KIMQDGFIDV----K 216 (318)
Q Consensus 154 ~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~----~~~~~--------~~~~~~~~~~----~ 216 (318)
.++++|+||||||.+++.++.++|+ |+++|++++............. ..... .+....+... .
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 1523 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSL 1523 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhh
Confidence 7789999999999999999999998 9999999875432211110000 00000 0000000000 0
Q ss_pred CCCCcce-------eeechHHHHH---hhc--cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC-------
Q 021050 217 NKTGDVE-------YRVTEESLMD---RLN--TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN------- 277 (318)
Q Consensus 217 ~~~~~~~-------~~~~~~~~~~---~~~--~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~------- 277 (318)
....... .......... .+. ..........++++|+|+|+|++|..++ +.+..+.+.+++
T Consensus 1524 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~ 1602 (1655)
T PLN02980 1524 RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGND 1602 (1655)
T ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccccc
Confidence 0000000 0000000000 000 0000011123678999999999999874 566777777665
Q ss_pred -----CEEEEECCCCccC-CCChHHHHHHHHHHHHhhcCCCCCC
Q 021050 278 -----HKLHVVEGANHGY-TNHQAELVSVVLDFVKASLKQDHPG 315 (318)
Q Consensus 278 -----~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~~~~~~ 315 (318)
+++++++++||.. .++++++.+.|.+||.+.-.+..++
T Consensus 1603 ~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~~~ 1646 (1655)
T PLN02980 1603 KGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSSTPG 1646 (1655)
T ss_pred ccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccCCCc
Confidence 4899999999997 5889999999999999876555443
No 56
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.91 E-value=1.4e-22 Score=158.66 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=159.5
Q ss_pred eEEEEeCCCCcEEEEEEecCC---CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhh
Q 021050 61 QELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWR 137 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~ 137 (318)
+...+..+||..+...+..++ ..|.||++||+.|+.++.+.+.+++.+.++||.|+++|+||++.+........-..
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G 129 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSG 129 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceeccc
Confidence 444666678877666555532 57899999999999988889999999999999999999999998876443322234
Q ss_pred hHHHHHHHHHHHHhC-CCCcEEEEEEechHH-HHHHHHhhcCC--ccEEEEeccCccccch-------hh-hhhhHHHHH
Q 021050 138 EADDLRAVVQYFCGA-NRAVGAILGHSKGGS-VVLLYASKYND--IRTFVNVSGRYDLKGG-------IE-DRLGKDYME 205 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~-~a~~~a~~~p~--v~~~v~~~~~~~~~~~-------~~-~~~~~~~~~ 205 (318)
+.+|+..++++++.. ...++..+|.|+||. ++..++.+-.+ +.+.+.++.++++... +. ..+.+.+..
T Consensus 130 ~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~ 209 (345)
T COG0429 130 ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLR 209 (345)
T ss_pred chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence 469999999999886 667899999999995 45554444433 7888888887765321 11 111111111
Q ss_pred HHhccCCccccCCCCcceee--------echHHHHHhhc---------cChHHHhh----hccCCCcEEEEEcCCCCccC
Q 021050 206 KIMQDGFIDVKNKTGDVEYR--------VTEESLMDRLN---------TNMHDACL----QIDMECSVLTIHGSSDKIIP 264 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~----~~~~~~P~lii~g~~D~~~~ 264 (318)
.+.................. .+...+.+.+. .+...... ..+|.+|+|+|++.+|++++
T Consensus 210 ~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~ 289 (345)
T COG0429 210 NLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMP 289 (345)
T ss_pred HHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCC
Confidence 11110000000000000000 00001111111 01111111 12689999999999999999
Q ss_pred cchhHHHHh-hCCCCEEEEECCCCccC-CC----ChH-HHHHHHHHHHHhhcCC
Q 021050 265 LQDAHEFDK-IIPNHKLHVVEGANHGY-TN----HQA-ELVSVVLDFVKASLKQ 311 (318)
Q Consensus 265 ~~~~~~~~~-~~~~~~~~~~~~~gH~~-~~----~~~-~~~~~i~~fl~~~~~~ 311 (318)
++..-.... ..|++.+.+-+.+||.- .. ++. ...+.+.+|++..++.
T Consensus 290 ~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 290 PEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred hhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 877765555 66788999999999993 33 222 5678899999877643
No 57
>PLN02872 triacylglycerol lipase
Probab=99.91 E-value=1.4e-22 Score=169.74 Aligned_cols=252 Identities=16% Similarity=0.138 Sum_probs=159.4
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC-------CCeEEEEEccCCCCCCChh----HHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE-------SSEIVVLCHGFRSTKDDPS----MVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~-------~~~~vv~~hG~~~~~~~~~----~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
+.|+..+++.||..|.....+++ ++|+|+++||+++++..|. ...++..|+++||+|+++|.||++.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 55889999999999998776422 3689999999988875432 135677889999999999999988664
Q ss_pred CCc---------cCCChhhhH-HHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC----ccEEEEeccCcccc-
Q 021050 128 GSF---------QYGNYWREA-DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYDLK- 192 (318)
Q Consensus 128 ~~~---------~~~~~~~~~-~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~~~- 192 (318)
+.. ...++.+.+ .|+.++++++.+...++++++|||+||.+++.++ .+|+ |+.+++++|.....
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 311 123566666 7999999999765457899999999999998655 5665 77788888764321
Q ss_pred --chhhhhhhHH----H---------------H----HHHhccC------CccccCCCCcce------------eeechH
Q 021050 193 --GGIEDRLGKD----Y---------------M----EKIMQDG------FIDVKNKTGDVE------------YRVTEE 229 (318)
Q Consensus 193 --~~~~~~~~~~----~---------------~----~~~~~~~------~~~~~~~~~~~~------------~~~~~~ 229 (318)
..+...+... . . ..+.... ...+........ ...+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k 281 (395)
T PLN02872 202 VTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVK 281 (395)
T ss_pred CCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHH
Confidence 1111000000 0 0 0000000 000000000000 000000
Q ss_pred HHHH-----------hhccChHH-----------HhhhccC--CCcEEEEEcCCCCccCcchhHHHHhhCCC-CEEEEEC
Q 021050 230 SLMD-----------RLNTNMHD-----------ACLQIDM--ECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKLHVVE 284 (318)
Q Consensus 230 ~~~~-----------~~~~~~~~-----------~~~~~~~--~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~ 284 (318)
.+.. .++..... .....++ ++|+++++|++|..++++.++.+.+.+++ .+++.++
T Consensus 282 ~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~ 361 (395)
T PLN02872 282 NLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLE 361 (395)
T ss_pred HHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcC
Confidence 0000 00000000 0011133 68999999999999999999999999887 6888999
Q ss_pred CCCcc---CC-CChHHHHHHHHHHHHhhcCC
Q 021050 285 GANHG---YT-NHQAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 285 ~~gH~---~~-~~~~~~~~~i~~fl~~~~~~ 311 (318)
+++|. +. +.++++.+.|.+||++..+.
T Consensus 362 ~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 362 NYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 99996 22 56778999999999976543
No 58
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.90 E-value=2.6e-22 Score=144.17 Aligned_cols=194 Identities=24% Similarity=0.396 Sum_probs=153.2
Q ss_pred eEEEEeCCCCcEEEEEEecC--CCCeEEEEEccC---CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCCh
Q 021050 61 QELVIPNKYGERLVGVLHDA--ESSEIVVLCHGF---RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY 135 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~--~~~~~vv~~hG~---~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~ 135 (318)
.++.|+.+.| .+.+.+.++ ...|+.|++|.. +++..+.....+++.|.++||.++.+|+||.|.|.+.....
T Consensus 5 ~~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G-- 81 (210)
T COG2945 5 PTVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG-- 81 (210)
T ss_pred CcEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC--
Confidence 5677776655 455555443 367888999874 45555577888999999999999999999999999887532
Q ss_pred hhhHHHHHHHHHHHHhCCC--CcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCc
Q 021050 136 WREADDLRAVVQYFCGANR--AVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFI 213 (318)
Q Consensus 136 ~~~~~d~~~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (318)
.-+.+|..++++|++.+.+ ....+.|+|+|+++++.+|.+.|+....+.+.++.......
T Consensus 82 iGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs------------------ 143 (210)
T COG2945 82 IGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFS------------------ 143 (210)
T ss_pred cchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhh------------------
Confidence 3448899999999998833 23478999999999999999999988888877765411000
Q ss_pred cccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCC
Q 021050 214 DVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNH 293 (318)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 293 (318)
......+|.++|+|+.|.+++.....++++. ...+++++++++|+|+.+
T Consensus 144 ------------------------------~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gK 192 (210)
T COG2945 144 ------------------------------FLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGK 192 (210)
T ss_pred ------------------------------hccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceeccc
Confidence 0003478999999999999999888888877 457889999999999999
Q ss_pred hHHHHHHHHHHHH
Q 021050 294 QAELVSVVLDFVK 306 (318)
Q Consensus 294 ~~~~~~~i~~fl~ 306 (318)
-..+.+.|.+|+.
T Consensus 193 l~~l~~~i~~~l~ 205 (210)
T COG2945 193 LIELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999995
No 59
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=5.7e-22 Score=155.72 Aligned_cols=224 Identities=20% Similarity=0.302 Sum_probs=159.8
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGA 158 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~ 158 (318)
++.|+++++||+.++... |..+.+.|+.. |..|+++|.|.||.|..... .++..+++|+..+|+..... ...++.
T Consensus 50 ~~~Pp~i~lHGl~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-HNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccc-cCHHHHHHHHHHHHHHcccccccCCce
Confidence 478999999999999965 99999999775 78999999999999986554 35889999999999988643 456799
Q ss_pred EEEEechH-HHHHHHHhhcCC-ccEEEEeccCcc-ccchh---hh---------------------------hhhHHHHH
Q 021050 159 ILGHSKGG-SVVLLYASKYND-IRTFVNVSGRYD-LKGGI---ED---------------------------RLGKDYME 205 (318)
Q Consensus 159 l~G~S~Gg-~~a~~~a~~~p~-v~~~v~~~~~~~-~~~~~---~~---------------------------~~~~~~~~ 205 (318)
++|||||| .+++..+...|+ +..+|.+.-... ..... .+ ........
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~ 206 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVR 206 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHH
Confidence 99999999 777777788888 777666654331 11000 00 00001111
Q ss_pred HHhccCCccccCCCCcceeeechHHHHHhhcc----ChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEE
Q 021050 206 KIMQDGFIDVKNKTGDVEYRVTEESLMDRLNT----NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLH 281 (318)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~ 281 (318)
.+....+.. ........|......+.+.+.. .............|++++.|.++.+++.+....+.+.+|+++++
T Consensus 207 ~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~ 285 (315)
T KOG2382|consen 207 QFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVH 285 (315)
T ss_pred HHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchhee
Confidence 111111111 2333455566655555444433 11111111345789999999999999999999999999999999
Q ss_pred EECCCCccCC-CChHHHHHHHHHHHHhh
Q 021050 282 VVEGANHGYT-NHQAELVSVVLDFVKAS 308 (318)
Q Consensus 282 ~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 308 (318)
.++++||+.+ ++|+++.+.|.+|+.+.
T Consensus 286 ~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 286 ELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred ecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999974 88999999999998764
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.90 E-value=3.1e-22 Score=146.77 Aligned_cols=142 Identities=28% Similarity=0.513 Sum_probs=113.9
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHh--CCCCcEEEEEE
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG--ANRAVGAILGH 162 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~--~~~~~i~l~G~ 162 (318)
+||++||++++. ..+..+++.|+++||.|+.+|+|++|.+.. ..++.++++.+.. .+.++++++||
T Consensus 1 ~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSR--RDYQPLAEALAEQGYAVVAFDYPGHGDSDG----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTT--HHHHHHHHHHHHTTEEEEEESCTTSTTSHH----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCH--HHHHHHHHHHHHCCCEEEEEecCCCCccch----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 689999999987 568999999999999999999999998732 2245555555421 27789999999
Q ss_pred echHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHH
Q 021050 163 SKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDA 242 (318)
Q Consensus 163 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (318)
|+||.+++.++.+.+.++++|++++... ...+
T Consensus 69 S~Gg~~a~~~~~~~~~v~~~v~~~~~~~-~~~~----------------------------------------------- 100 (145)
T PF12695_consen 69 SMGGAIAANLAARNPRVKAVVLLSPYPD-SEDL----------------------------------------------- 100 (145)
T ss_dssp THHHHHHHHHHHHSTTESEEEEESESSG-CHHH-----------------------------------------------
T ss_pred ccCcHHHHHHhhhccceeEEEEecCccc-hhhh-----------------------------------------------
Confidence 9999999999999877999999998311 0000
Q ss_pred hhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC-CCEEEEECCCCcc
Q 021050 243 CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHG 289 (318)
Q Consensus 243 ~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 289 (318)
.+.+.|+++++|++|..++.+..+.+++.++ +.++++++|++|+
T Consensus 101 ---~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 ---AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0336799999999999999999999988877 5899999999995
No 61
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.89 E-value=1.4e-22 Score=146.22 Aligned_cols=241 Identities=15% Similarity=0.155 Sum_probs=157.3
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCccCCChhhhH
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREA 139 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~~~~~~~~~~ 139 (318)
..+.+ +|+.|.+.-++.|++ .|++++|.-++... .|......|-+. -+.++++|.||||.|..+......+-..
T Consensus 24 ~kv~v---ng~ql~y~~~G~G~~-~iLlipGalGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~ 98 (277)
T KOG2984|consen 24 SKVHV---NGTQLGYCKYGHGPN-YILLIPGALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFM 98 (277)
T ss_pred heeee---cCceeeeeecCCCCc-eeEecccccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHH
Confidence 44444 688888665555554 58888888777653 355555554333 3899999999999999776555555555
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhh-hhhhHHHHHHHhccCCccccC
Q 021050 140 DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE-DRLGKDYMEKIMQDGFIDVKN 217 (318)
Q Consensus 140 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 217 (318)
+|...+++-++..+.+++.++|+|-||..|+..|+++++ |..+|++++.......-. ..-+-+-...+....-.+...
T Consensus 99 ~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~ 178 (277)
T KOG2984|consen 99 KDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYED 178 (277)
T ss_pred HhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHH
Confidence 666666665555588899999999999999999999999 999999987655442211 111111111111111111111
Q ss_pred CCCcceeeechHH-------HHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC
Q 021050 218 KTGDVEYRVTEES-------LMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY 290 (318)
Q Consensus 218 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 290 (318)
..+...+.-.... +.+.-..+. -.....+++||+||++|++|++++..++--+....+.+++.+.|.++|.+
T Consensus 179 ~Yg~e~f~~~wa~wvD~v~qf~~~~dG~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~ 257 (277)
T KOG2984|consen 179 HYGPETFRTQWAAWVDVVDQFHSFCDGRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNF 257 (277)
T ss_pred hcCHHHHHHHHHHHHHHHHHHhhcCCCch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcce
Confidence 0000000000011 111111111 12222378999999999999999999988888888999999999999998
Q ss_pred C-CChHHHHHHHHHHHHh
Q 021050 291 T-NHQAELVSVVLDFVKA 307 (318)
Q Consensus 291 ~-~~~~~~~~~i~~fl~~ 307 (318)
+ ..++++.+.+.+||++
T Consensus 258 hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 258 HLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred eeechHHHHHHHHHHHhc
Confidence 5 6688999999999986
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.89 E-value=7.7e-21 Score=150.46 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=109.5
Q ss_pred EEEEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCCC--ChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhh
Q 021050 62 ELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKD--DPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWR 137 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~ 137 (318)
.+.+++..|.....++.+.+ +.++||++||+++... ...|..+++.|+++||.|+++|+||||.|.+.....++..
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~ 81 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDV 81 (266)
T ss_pred CEEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHH
Confidence 45677777755544333333 3678999999987532 1456778999999999999999999999987665557788
Q ss_pred hHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhh
Q 021050 138 EADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRL 199 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~ 199 (318)
+.+|+..+++++++.+..+++|+||||||.+++.+|.++|+ ++++|+++|.......+...+
T Consensus 82 ~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~l 144 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFL 144 (266)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHH
Confidence 89999999999987777899999999999999999999987 999999998776555544433
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.88 E-value=9.4e-22 Score=153.56 Aligned_cols=195 Identities=23% Similarity=0.309 Sum_probs=129.7
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccC---C-ChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHH
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQY---G-NYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYA 173 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~---~-~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a 173 (318)
|......|+++||.|+.+|+||.+........ . .-....+|+.++++++.++ +.++++++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 45677889999999999999998754422211 1 1134588999999999877 568999999999999999999
Q ss_pred hhcCC-ccEEEEeccCccccchhhhhhhHHHHH-HHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCc
Q 021050 174 SKYND-IRTFVNVSGRYDLKGGIEDRLGKDYME-KIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECS 251 (318)
Q Consensus 174 ~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 251 (318)
.++|+ +++++..+|..+.......... +.. ......... . ....+..... ........+++|
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~~--~---------~~~~~~~~s~---~~~~~~~~~~~P 146 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDPW--D---------NPEFYRELSP---ISPADNVQIKPP 146 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSSTT--T---------SHHHHHHHHH---GGGGGGCGGGSE
T ss_pred cccceeeeeeeccceecchhcccccccc--cccccccccCccc--h---------hhhhhhhhcc---ccccccccCCCC
Confidence 98999 9999999998876654433211 110 000000000 0 0111111000 000111015889
Q ss_pred EEEEEcCCCCccCcchhHHHHhhCC----CCEEEEECCCCccCC--CChHHHHHHHHHHHHhhcCC
Q 021050 252 VLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYT--NHQAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 252 ~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~ 311 (318)
+|++||++|..||++++..+.+.+. +++++++|++||.+. +...+..+.+.+||+++++.
T Consensus 147 ~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 147 VLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999988877653 489999999999764 34457899999999999874
No 64
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=5e-20 Score=149.72 Aligned_cols=250 Identities=18% Similarity=0.218 Sum_probs=161.2
Q ss_pred ceeEEEEeCCCCcEEEEEEecC---------CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA---------ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS 129 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~---------~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~ 129 (318)
..++.-++.+||..+...+..+ +..|+||++||+.+++.+.+.+.++..+.++||+|++++.||+|.++-.
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~Lt 171 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLT 171 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccC
Confidence 5577788888998888776632 2569999999999988777889999999999999999999999988755
Q ss_pred ccCCChhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC---ccEEEEeccCccc---cchhhhhhhHH
Q 021050 130 FQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYDL---KGGIEDRLGKD 202 (318)
Q Consensus 130 ~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~---~~~~~~~~~~~ 202 (318)
.+..--..+.+|+.+++++++.+ +..++..+|.||||++...+..+..+ +.+.+.++.+++. ...+.....+.
T Consensus 172 Tpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~ 251 (409)
T KOG1838|consen 172 TPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRR 251 (409)
T ss_pred CCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchH
Confidence 43322345589999999999988 55679999999999999999988754 6666666666663 22222211111
Q ss_pred HHHHHhccCCcccc--------CCCCc---ceeeechHHHHHhh--------------ccChHHHhhhccCCCcEEEEEc
Q 021050 203 YMEKIMQDGFIDVK--------NKTGD---VEYRVTEESLMDRL--------------NTNMHDACLQIDMECSVLTIHG 257 (318)
Q Consensus 203 ~~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~P~lii~g 257 (318)
+............. ..... ....-+...+.+.+ ...... ....+|++|+|+|++
T Consensus 252 ~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~-~~v~~I~VP~L~ina 330 (409)
T KOG1838|consen 252 FYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSS-NYVDKIKVPLLCINA 330 (409)
T ss_pred HHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchh-hhcccccccEEEEec
Confidence 11111111111000 00000 00001111111111 111000 011267999999999
Q ss_pred CCCCccCcchh-HHHHhhCCCCEEEEECCCCcc-CCCC----hHHHHHH-HHHHHHhhc
Q 021050 258 SSDKIIPLQDA-HEFDKIIPNHKLHVVEGANHG-YTNH----QAELVSV-VLDFVKASL 309 (318)
Q Consensus 258 ~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~-~~~~----~~~~~~~-i~~fl~~~~ 309 (318)
.+|+++|.+.. .......|++-+.+-..+||. +++. +..+.+. +.+|+....
T Consensus 331 ~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 331 ADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 99999998543 455566677888888889999 4433 2334444 777776543
No 65
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.87 E-value=1.2e-20 Score=158.22 Aligned_cols=235 Identities=13% Similarity=0.183 Sum_probs=144.9
Q ss_pred CCCcEEEEEEecC---CCCeEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhH-H
Q 021050 68 KYGERLVGVLHDA---ESSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA-D 140 (318)
Q Consensus 68 ~~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~-~ 140 (318)
.++..+..+. +. ..+++||++||+..+... ..+..+++.|.++||+|+++|++|+|.+.... ++.++. +
T Consensus 45 ~~~~~l~~~~-~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~ 120 (350)
T TIGR01836 45 EDKVVLYRYT-PVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYING 120 (350)
T ss_pred cCcEEEEEec-CCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHH
Confidence 3455555432 22 234579999998654411 11368999999999999999999999876432 455555 4
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchh--h----hhh------------h
Q 021050 141 DLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI--E----DRL------------G 200 (318)
Q Consensus 141 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~----~~~------------~ 200 (318)
++.++++++.+. +.++++++||||||.+++.+++.+|+ |+++|+++++.+..... . ... .
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 200 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIP 200 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCC
Confidence 588888888776 66789999999999999999999998 99999999987653211 0 000 0
Q ss_pred HHHHHH---Hhcc-C-----CccccC--CCCc-------------ceeeechHHHHHhh----ccChHH---------Hh
Q 021050 201 KDYMEK---IMQD-G-----FIDVKN--KTGD-------------VEYRVTEESLMDRL----NTNMHD---------AC 243 (318)
Q Consensus 201 ~~~~~~---~~~~-~-----~~~~~~--~~~~-------------~~~~~~~~~~~~~~----~~~~~~---------~~ 243 (318)
...... +... . +..... .... .........+.+.+ ...... ..
T Consensus 201 ~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~ 280 (350)
T TIGR01836 201 GELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKV 280 (350)
T ss_pred HHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEc
Confidence 000000 0000 0 000000 0000 00000000000000 000000 00
Q ss_pred hhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC--CEEEEECCCCccC-CCC---hHHHHHHHHHHHHh
Q 021050 244 LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN--HKLHVVEGANHGY-TNH---QAELVSVVLDFVKA 307 (318)
Q Consensus 244 ~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~-~~~---~~~~~~~i~~fl~~ 307 (318)
...++++|+++++|++|.++|++.++.+.+.+++ +++++++ +||.. +.+ ++++++.|.+||.+
T Consensus 281 ~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 281 DLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred cHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 1125699999999999999999999999988864 5677777 57874 432 47899999999975
No 66
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.86 E-value=5e-20 Score=144.25 Aligned_cols=179 Identities=23% Similarity=0.338 Sum_probs=122.2
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC-CCCCccC--C--------ChhhhHHHHHHHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE-SEGSFQY--G--------NYWREADDLRAVVQYFC 150 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~-s~~~~~~--~--------~~~~~~~d~~~~i~~l~ 150 (318)
+.|.||++|++.+-. ...+.+++.|+++||.|+++|+-+-.. ....... . .......|+.+++++++
T Consensus 13 ~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 579999999999877 568899999999999999999864433 1111100 0 02344678889999998
Q ss_pred hCC---CCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeec
Q 021050 151 GAN---RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVT 227 (318)
Q Consensus 151 ~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
.+. .++|.++|+|+||.+++.++.+.+.+++++...|........
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~-------------------------------- 138 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPL-------------------------------- 138 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHH--------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcch--------------------------------
Confidence 874 579999999999999999999887799999888711111000
Q ss_pred hHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC----CCCEEEEECCCCccCCCC---------h
Q 021050 228 EESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII----PNHKLHVVEGANHGYTNH---------Q 294 (318)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~---------~ 294 (318)
....++++|+++++|++|+.++.+..+.+.+.+ ...++++|+|++|.|... .
T Consensus 139 ---------------~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa 203 (218)
T PF01738_consen 139 ---------------EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAA 203 (218)
T ss_dssp ---------------HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHH
T ss_pred ---------------hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHH
Confidence 000155899999999999999998776666554 468999999999998631 2
Q ss_pred HHHHHHHHHHHHhhc
Q 021050 295 AELVSVVLDFVKASL 309 (318)
Q Consensus 295 ~~~~~~i~~fl~~~~ 309 (318)
++.++.+.+||+++|
T Consensus 204 ~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 204 EDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHhcC
Confidence 457888999998765
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.86 E-value=3e-20 Score=146.06 Aligned_cols=175 Identities=18% Similarity=0.265 Sum_probs=120.7
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-----c-----c-CC---ChhhhHHHHHHHH
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-----F-----Q-YG---NYWREADDLRAVV 146 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~-----~-----~-~~---~~~~~~~d~~~~i 146 (318)
...|+||++||+|++.. .+..+++.|.+.++.+..++++|...+... . . .. ......+.+.+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 35789999999999994 588999999887766666666665322110 0 0 00 1112233444555
Q ss_pred HHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcc
Q 021050 147 QYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDV 222 (318)
Q Consensus 147 ~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (318)
+++..+ +.++++++|+|+||.+++.++.++|+ +.+++.+++..... .. .
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~-----------------------~~---~- 144 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL-----------------------PE---T- 144 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc-----------------------cc---c-
Confidence 555443 34689999999999999999998888 66677776632100 00 0
Q ss_pred eeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEEEECCCCccCCCChHHHH
Q 021050 223 EYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYTNHQAELV 298 (318)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~ 298 (318)
.....|++++||++|+++|.+.++++.+.+. ++++++++++||.+. ++..
T Consensus 145 -----------------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~---~~~~ 198 (232)
T PRK11460 145 -----------------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID---PRLM 198 (232)
T ss_pred -----------------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC---HHHH
Confidence 0126799999999999999999888777653 468889999999984 4556
Q ss_pred HHHHHHHHhhcC
Q 021050 299 SVVLDFVKASLK 310 (318)
Q Consensus 299 ~~i~~fl~~~~~ 310 (318)
+.+.+||.+.+.
T Consensus 199 ~~~~~~l~~~l~ 210 (232)
T PRK11460 199 QFALDRLRYTVP 210 (232)
T ss_pred HHHHHHHHHHcc
Confidence 667777766653
No 68
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.86 E-value=8.7e-20 Score=138.66 Aligned_cols=245 Identities=14% Similarity=0.147 Sum_probs=150.0
Q ss_pred ceeEEEEeCCCCcEEEEEEecC--CCCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCc-cCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA--ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSF-QYGN 134 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~-~~~~ 134 (318)
+.+++.++..++ ++..++..+ ..+|+++++||+|.+.- .|..++..+... ..+++++|+||||++.-.. ...+
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~~t~gpil~l~HG~G~S~L--SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS 125 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPSATEGPILLLLHGGGSSAL--SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLS 125 (343)
T ss_pred cccccccCCCcc-eEEEEEecCCCCCccEEEEeecCcccch--hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcC
Confidence 667788876665 666666544 47899999999999994 489999888654 5788999999999998654 4567
Q ss_pred hhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc--CCccEEEEeccCcccc----chhhh----------h
Q 021050 135 YWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY--NDIRTFVNVSGRYDLK----GGIED----------R 198 (318)
Q Consensus 135 ~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~v~~~v~~~~~~~~~----~~~~~----------~ 198 (318)
.+.+..|+.++++++-.....+|+||||||||.+|...|... |.+.|++.++-.-... ..+.. .
T Consensus 126 ~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~S 205 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKS 205 (343)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccc
Confidence 888999999999999877677899999999999998877653 6688888775321000 00000 0
Q ss_pred hhHHHHHHHhccCCccc------------cCCCC-cceeeechHHHHHhhccChHHHh-hhccCCCcEEEEEcCCCCccC
Q 021050 199 LGKDYMEKIMQDGFIDV------------KNKTG-DVEYRVTEESLMDRLNTNMHDAC-LQIDMECSVLTIHGSSDKIIP 264 (318)
Q Consensus 199 ~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~lii~g~~D~~~~ 264 (318)
+..+....+........ ....+ ...|+........++........ .-....+|-++|.+..|..-.
T Consensus 206 i~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDk 285 (343)
T KOG2564|consen 206 IEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDK 285 (343)
T ss_pred hhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCc
Confidence 00000000000000000 00111 22233222222222211111000 011446787777777775411
Q ss_pred cchhHHHHhhCCCCEEEEECCCCccCCCC-hHHHHHHHHHHHHhhc
Q 021050 265 LQDAHEFDKIIPNHKLHVVEGANHGYTNH-QAELVSVVLDFVKASL 309 (318)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~i~~fl~~~~ 309 (318)
...+-+.-...++.+++.+||+.+++ |..++..+..|+.++-
T Consensus 286 ---dLtiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 286 ---DLTIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred ---ceeeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 11111222356899999999999865 5689999999987653
No 69
>PRK10115 protease 2; Provisional
Probab=99.85 E-value=1.2e-19 Score=162.86 Aligned_cols=242 Identities=13% Similarity=0.112 Sum_probs=167.0
Q ss_pred ceeEEEEeCCCCcEEEEE-Eec-----CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC
Q 021050 59 KQQELVIPNKYGERLVGV-LHD-----AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~-~~~-----~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 132 (318)
..+.+.+++.||.+|.++ ++. .++.|+||++||..+......|......|.++||.|+.+++||-|.-......
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 778999999999999984 442 24679999999988877655677777889999999999999997655532211
Q ss_pred CC----hhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhh-h--hhH
Q 021050 133 GN----YWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED-R--LGK 201 (318)
Q Consensus 133 ~~----~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-~--~~~ 201 (318)
.. -....+|+.+++++|..+ +.+++++.|.|.||+++..++.++|+ ++++|...|..++...+.. . ...
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~ 574 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTT 574 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCCh
Confidence 10 013378999999999888 56799999999999999999999999 9999999998876543311 0 011
Q ss_pred HHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCc-EEEEEcCCCCccCcchhHHHHhhCC----
Q 021050 202 DYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECS-VLTIHGSSDKIIPLQDAHEFDKIIP---- 276 (318)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~lii~g~~D~~~~~~~~~~~~~~~~---- 276 (318)
.....+ . .....+...-.....+..... +++.| +|+++|.+|..|++.++.++..++.
T Consensus 575 ~~~~e~-----G----------~p~~~~~~~~l~~~SP~~~v~--~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~ 637 (686)
T PRK10115 575 GEFEEW-----G----------NPQDPQYYEYMKSYSPYDNVT--AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT 637 (686)
T ss_pred hHHHHh-----C----------CCCCHHHHHHHHHcCchhccC--ccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCC
Confidence 100000 0 000111111111122222222 34778 6677999999999999988887763
Q ss_pred CCEEEEE---CCCCccCCCChHHH---HHHHHHHHHhhcCCCCCCCC
Q 021050 277 NHKLHVV---EGANHGYTNHQAEL---VSVVLDFVKASLKQDHPGTQ 317 (318)
Q Consensus 277 ~~~~~~~---~~~gH~~~~~~~~~---~~~i~~fl~~~~~~~~~~~~ 317 (318)
+.+++++ +++||.......+. ......||-..++...|.++
T Consensus 638 ~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~~~~~~ 684 (686)
T PRK10115 638 DDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGTLPATP 684 (686)
T ss_pred CCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCcCCCcC
Confidence 3567777 89999965444333 33457888888888777653
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.85 E-value=6.6e-19 Score=137.74 Aligned_cols=199 Identities=21% Similarity=0.300 Sum_probs=153.8
Q ss_pred eEEEEeCCCCcEEEEEEecCC---CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCcc-----
Q 021050 61 QELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSFQ----- 131 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~-G~s~~~~~----- 131 (318)
+.+++++.+ ..+.+++..+. +.|.||++|+..+-. ...+.+++.|+++||.|+++|+-+. |.+.....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLN--PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCc--hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHH
Confidence 567888776 78888777543 348999999999988 5699999999999999999998763 33322110
Q ss_pred ------CCChhhhHHHHHHHHHHHHhCC---CCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHH
Q 021050 132 ------YGNYWREADDLRAVVQYFCGAN---RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKD 202 (318)
Q Consensus 132 ------~~~~~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~ 202 (318)
.........|+.+.+++|..+. ..+|.++|+|+||.+++.++.+.|++++.+...|.........
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~------ 153 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTAD------ 153 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccc------
Confidence 0122566889999999998774 6789999999999999999999989999998877543211100
Q ss_pred HHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CC
Q 021050 203 YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NH 278 (318)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~ 278 (318)
..++++|+|+.+|+.|..+|......+.+.+. ..
T Consensus 154 ------------------------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~ 191 (236)
T COG0412 154 ------------------------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKV 191 (236)
T ss_pred ------------------------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCe
Confidence 01568999999999999999888777766553 47
Q ss_pred EEEEECCCCccCCCC------------hHHHHHHHHHHHHhhcC
Q 021050 279 KLHVVEGANHGYTNH------------QAELVSVVLDFVKASLK 310 (318)
Q Consensus 279 ~~~~~~~~gH~~~~~------------~~~~~~~i~~fl~~~~~ 310 (318)
++.+|+++.|.|+.. .+..++.+.+|+++.+.
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 889999999998632 24678899999998764
No 71
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.85 E-value=6.1e-19 Score=143.68 Aligned_cols=231 Identities=18% Similarity=0.194 Sum_probs=144.4
Q ss_pred ceeEEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-----
Q 021050 59 KQQELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS----- 129 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~----- 129 (318)
...+|+|.+.+|..|.+++..| ++.|+||.+||.++... .+.... .++.+||.|+.+|.||.|.....
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~--~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~ 131 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG--DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSS 131 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG--GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBS
T ss_pred EEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC--Cccccc-ccccCCeEEEEecCCCCCCCCCCccccC
Confidence 6689999999999999998754 36689999999999863 344433 46788999999999999832210
Q ss_pred ---------------ccCCChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccc
Q 021050 130 ---------------FQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDL 191 (318)
Q Consensus 130 ---------------~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~ 191 (318)
....-+.....|+..+++++.+. +.++|++.|.|+||.+++.+|+..++|++++...|.+.-
T Consensus 132 ~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 132 GGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCD 211 (320)
T ss_dssp SS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSS
T ss_pred CCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccc
Confidence 00011234568999999999987 567999999999999999999999999999999886543
Q ss_pred cchhhhhhh-----HHHHHHHhccCCccccCCCCcceeeechHHHHHhhcc-ChHHHhhhccCCCcEEEEEcCCCCccCc
Q 021050 192 KGGIEDRLG-----KDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNT-NMHDACLQIDMECSVLTIHGSSDKIIPL 265 (318)
Q Consensus 192 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~lii~g~~D~~~~~ 265 (318)
......... .++...+... + ......+.+.+.+.. |.... ...|+||+++-.|-.|+++|+
T Consensus 212 ~~~~~~~~~~~~~y~~~~~~~~~~------d-----~~~~~~~~v~~~L~Y~D~~nf--A~ri~~pvl~~~gl~D~~cPP 278 (320)
T PF05448_consen 212 FRRALELRADEGPYPEIRRYFRWR------D-----PHHEREPEVFETLSYFDAVNF--ARRIKCPVLFSVGLQDPVCPP 278 (320)
T ss_dssp HHHHHHHT--STTTHHHHHHHHHH------S-----CTHCHHHHHHHHHHTT-HHHH--GGG--SEEEEEEETT-SSS-H
T ss_pred hhhhhhcCCccccHHHHHHHHhcc------C-----CCcccHHHHHHHHhhhhHHHH--HHHcCCCEEEEEecCCCCCCc
Confidence 222111110 1111111000 0 000111222222222 11111 126799999999999999999
Q ss_pred chhHHHHhhCC-CCEEEEECCCCccCCCChHHH-HHHHHHHHHhh
Q 021050 266 QDAHEFDKIIP-NHKLHVVEGANHGYTNHQAEL-VSVVLDFVKAS 308 (318)
Q Consensus 266 ~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~-~~~i~~fl~~~ 308 (318)
......+..++ .+++.++|..||... ++. .+...+||.++
T Consensus 279 ~t~fA~yN~i~~~K~l~vyp~~~He~~---~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 279 STQFAAYNAIPGPKELVVYPEYGHEYG---PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHHHHHCC--SSEEEEEETT--SSTT---HHHHHHHHHHHHHH-
T ss_pred hhHHHHHhccCCCeeEEeccCcCCCch---hhHHHHHHHHHHhcC
Confidence 99999999886 579999999999864 444 77888998764
No 72
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=2.5e-19 Score=150.28 Aligned_cols=232 Identities=15% Similarity=0.153 Sum_probs=144.0
Q ss_pred cEEEEEEecC---CCCeEEEEEccCCCCCCC-----------hhHHHHH---HHHHHcCceEEEEcCCCCCCCCC-----
Q 021050 71 ERLVGVLHDA---ESSEIVVLCHGFRSTKDD-----------PSMVNLA---VALQNEGISAFRFDFAGNGESEG----- 128 (318)
Q Consensus 71 ~~l~~~~~~~---~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~~l~~~G~~v~~~d~~g~G~s~~----- 128 (318)
.+|.|..++. .+.++||++|++.++... .+|..++ +.|....|.||++|..|-|.|..
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 4455555553 356899999999986521 1244443 23433359999999998764211
Q ss_pred ----------------CccCCChhhhHHHHHHHHHHHHhCCCCcEE-EEEEechHHHHHHHHhhcCC-ccEEEEeccCcc
Q 021050 129 ----------------SFQYGNYWREADDLRAVVQYFCGANRAVGA-ILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 190 (318)
Q Consensus 129 ----------------~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 190 (318)
..+..++.++++++.++++.+ +.+++. ++||||||++++.+|.++|+ |+++|++++...
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 122346777788888888877 788886 99999999999999999999 999999977543
Q ss_pred ccchhhhhhhHHHHHHHh-------------------------------------ccCCccccCCCCc----ceeeechH
Q 021050 191 LKGGIEDRLGKDYMEKIM-------------------------------------QDGFIDVKNKTGD----VEYRVTEE 229 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~----~~~~~~~~ 229 (318)
........+.......+. ...+......... .......+
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 321110000000000000 0000000000000 00000111
Q ss_pred HHHHhh--------c-------------c-------ChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----C
Q 021050 230 SLMDRL--------N-------------T-------NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----N 277 (318)
Q Consensus 230 ~~~~~~--------~-------------~-------~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~ 277 (318)
.+.... . . +... ...++++|+|+|+|++|.++|++..+.+.+.++ +
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~--~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEE--ALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHH--HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCC
Confidence 111100 0 0 0111 112579999999999999999999999988886 5
Q ss_pred CEEEEECC-CCccC-CCChHHHHHHHHHHHHh
Q 021050 278 HKLHVVEG-ANHGY-TNHQAELVSVVLDFVKA 307 (318)
Q Consensus 278 ~~~~~~~~-~gH~~-~~~~~~~~~~i~~fl~~ 307 (318)
++++++++ +||.. .++++++.+.|.+||++
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 89999986 89996 58889999999999975
No 73
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.82 E-value=4.4e-20 Score=146.12 Aligned_cols=187 Identities=21% Similarity=0.305 Sum_probs=118.1
Q ss_pred ceEEEEcCCCCCCCCC----CccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEecc
Q 021050 113 ISAFRFDFAGNGESEG----SFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 187 (318)
Q Consensus 113 ~~v~~~d~~g~G~s~~----~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 187 (318)
|+|+++|.||+|.|++ .....+..+.++++..+++.+ +.++++++||||||.+++.+|+++|+ |+++|++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~ 77 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISP 77 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEee
Confidence 6899999999999995 223445677788888888877 77789999999999999999999999 999999998
Q ss_pred Ccc----cc-chhhh-----hhhHHHHH-------HHhccCC---ccccCC-CCcceeeechHHHHH---------hhc-
Q 021050 188 RYD----LK-GGIED-----RLGKDYME-------KIMQDGF---IDVKNK-TGDVEYRVTEESLMD---------RLN- 236 (318)
Q Consensus 188 ~~~----~~-~~~~~-----~~~~~~~~-------~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~---------~~~- 236 (318)
+.. .. ..... ........ ....... ...... ............... ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00561_consen 78 PPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWN 157 (230)
T ss_dssp SSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred eccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccc
Confidence 621 00 00000 00000000 0000000 000000 000000000000000 000
Q ss_pred -----cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC-CCChHHHHHHHH
Q 021050 237 -----TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVSVVL 302 (318)
Q Consensus 237 -----~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~ 302 (318)
...........+++|+++++|++|.++|++....+.+.+|+.++++++++||.. .++++++.+.|.
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000001111267999999999999999999999999999999999999999996 577888877764
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=1.1e-17 Score=135.48 Aligned_cols=224 Identities=14% Similarity=0.120 Sum_probs=127.0
Q ss_pred eEEEEeCC-CCcEEEEEEecC-----CCCeEEEEEccCCCCCCChhHHHHHHHH-HHcCceEEEEcC--CCCCCCCCCc-
Q 021050 61 QELVIPNK-YGERLVGVLHDA-----ESSEIVVLCHGFRSTKDDPSMVNLAVAL-QNEGISAFRFDF--AGNGESEGSF- 130 (318)
Q Consensus 61 ~~v~~~~~-~g~~l~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~--~g~G~s~~~~- 130 (318)
+..++.+. -+..+.+.++.| ++.|+|+++||++++.+.+........+ .+.|+.|+++|. +|+|.+....
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~ 93 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDA 93 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccc
Confidence 33444332 455555555533 3578999999999888653333323344 556999999998 5555332100
Q ss_pred ----------------c---CCChhh-hHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCc
Q 021050 131 ----------------Q---YGNYWR-EADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 189 (318)
Q Consensus 131 ----------------~---~~~~~~-~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 189 (318)
. ...+.. ..+++..+++.....+.++++++||||||++++.++.++|+ +++++++++..
T Consensus 94 w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 94 WDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred ccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 0 001111 13444444443211256789999999999999999999999 99999998876
Q ss_pred cccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCc-chh
Q 021050 190 DLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL-QDA 268 (318)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~-~~~ 268 (318)
+.... ............. .. ...... +............|+++.+|+.|+.++. .+.
T Consensus 174 ~~~~~---~~~~~~~~~~l~~-----~~---~~~~~~-----------~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~ 231 (275)
T TIGR02821 174 APSRC---PWGQKAFSAYLGA-----DE---AAWRSY-----------DASLLVADGGRHSTILIDQGTADQFLDEQLRP 231 (275)
T ss_pred CcccC---cchHHHHHHHhcc-----cc---cchhhc-----------chHHHHhhcccCCCeeEeecCCCcccCccccH
Confidence 54311 0111111111100 00 000000 0011111112367999999999999998 455
Q ss_pred HHHHhhC----CCCEEEEECCCCccCCCChHHHHHHHHHHHHh
Q 021050 269 HEFDKII----PNHKLHVVEGANHGYTNHQAELVSVVLDFVKA 307 (318)
Q Consensus 269 ~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 307 (318)
..+.+.+ ..+++.++||++|.+..- .......++|..+
T Consensus 232 ~~~~~~l~~~g~~v~~~~~~g~~H~f~~~-~~~~~~~~~~~~~ 273 (275)
T TIGR02821 232 DAFEQACRAAGQALTLRRQAGYDHSYYFI-ASFIADHLRHHAE 273 (275)
T ss_pred HHHHHHHHHcCCCeEEEEeCCCCccchhH-HHhHHHHHHHHHh
Confidence 4444443 347899999999997422 2344444555544
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.82 E-value=3e-19 Score=146.42 Aligned_cols=233 Identities=21% Similarity=0.283 Sum_probs=137.9
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC---CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCCh
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY 135 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~ 135 (318)
+.+++.|+-. |.+|.++++-+. +.|+||++.|+.+-..+ ++..+.++|..+|+.++++|.||.|.|.......+.
T Consensus 164 ~i~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~ 241 (411)
T PF06500_consen 164 PIEEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS 241 (411)
T ss_dssp EEEEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C
T ss_pred CcEEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH
Confidence 4588888875 589999887543 45777777777776643 456666788999999999999999998754322232
Q ss_pred hhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcC-CccEEEEeccCccccc---hhhhhhhHHHHHHHh
Q 021050 136 WREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYN-DIRTFVNVSGRYDLKG---GIEDRLGKDYMEKIM 208 (318)
Q Consensus 136 ~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~ 208 (318)
.. -..++++++... +..+|+++|.|+||++|.++|..++ +++++|..+++..-.- .........+...+.
T Consensus 242 ~~---l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA 318 (411)
T PF06500_consen 242 SR---LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLA 318 (411)
T ss_dssp CH---HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHH
T ss_pred HH---HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHH
Confidence 22 345667777766 5679999999999999999998664 5999999998743221 111112222222221
Q ss_pred ccCCccccCCCCcceeeechHHHHHhhc-cChHHH--hhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECC
Q 021050 209 QDGFIDVKNKTGDVEYRVTEESLMDRLN-TNMHDA--CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEG 285 (318)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (318)
... +.. ....+.+...+. ...... ....+..+|+|.+.+++|+++|.+..+.++..-.+.+...++.
T Consensus 319 ~rl--------G~~--~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~ 388 (411)
T PF06500_consen 319 SRL--------GMA--AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPS 388 (411)
T ss_dssp HHC--------T-S--CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-S
T ss_pred HHh--------CCc--cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCC
Confidence 110 000 011222222211 111111 1123568999999999999999999988888777778888875
Q ss_pred CC-ccCCCChHHHHHHHHHHHHhhc
Q 021050 286 AN-HGYTNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 286 ~g-H~~~~~~~~~~~~i~~fl~~~~ 309 (318)
.. |.- -+.....+.+||++.+
T Consensus 389 ~~~~~g---y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 389 KPLHMG---YPQALDEIYKWLEDKL 410 (411)
T ss_dssp SSHHHH---HHHHHHHHHHHHHHHH
T ss_pred Cccccc---hHHHHHHHHHHHHHhc
Confidence 44 443 2577889999998764
No 76
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.82 E-value=4.3e-19 Score=133.77 Aligned_cols=221 Identities=13% Similarity=0.122 Sum_probs=148.8
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHH-HHhCCCCcEE
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY-FCGANRAVGA 158 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~-l~~~~~~~i~ 158 (318)
++.++-++++|-.|+++ ..|+.+...|... +.++++++||+|..-+.+...++.++++.+...+.. . ...++.
T Consensus 4 ~~~~~~L~cfP~AGGsa--~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~---~d~P~a 77 (244)
T COG3208 4 PGARLRLFCFPHAGGSA--SLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPL---LDAPFA 77 (244)
T ss_pred CCCCceEEEecCCCCCH--HHHHHHHhhCCch-hheeeecCCCcccccCCcccccHHHHHHHHHHHhcccc---CCCCee
Confidence 34667899999999988 6799999988664 999999999999988777777888888888777773 3 445799
Q ss_pred EEEEechHHHHHHHHhhcCC----ccEEEEeccCcc---ccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHH
Q 021050 159 ILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD---LKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 231 (318)
Q Consensus 159 l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
++||||||++|.++|.+..+ +.++.+.+.... ....+...-...++..+...+-.+..-....-...+....+
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPil 157 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPIL 157 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 99999999999999988643 566665554332 22233334445555555543333211111110011111111
Q ss_pred HH-hhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC-CCEEEEECCCCccCC-CChHHHHHHHHHHHHh
Q 021050 232 MD-RLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 307 (318)
Q Consensus 232 ~~-~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 307 (318)
.. ..............+.||+.++.|++|..+..+....|.+... ..++.+++| ||++. ...+++...|.+.+..
T Consensus 158 RAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 158 RADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhh
Confidence 11 1111111111223679999999999999999999998988876 689999996 99986 4556777777777753
No 77
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=7.5e-18 Score=138.92 Aligned_cols=227 Identities=15% Similarity=0.214 Sum_probs=140.7
Q ss_pred ceeEEEEeCCCCcEEEEEEecC--CCCeEEEEEccCCCCCCC-hhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCccCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA--ESSEIVVLCHGFRSTKDD-PSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQYGN 134 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~--~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~g~G~s~~~~~~~~ 134 (318)
..+++.++..+| .+.+.++.+ .+.|+||++||++....+ ..+..+++.|++ .|+.|+.+|||...+. .
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~-------~ 127 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA-------R 127 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-------C
Confidence 467888888777 466666544 356899999998843221 346778888877 4999999999964322 2
Q ss_pred hhhhHHHHHHHHHHHHhC------CCCcEEEEEEechHHHHHHHHhhc-------CCccEEEEeccCccccchhhh-h--
Q 021050 135 YWREADDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKY-------NDIRTFVNVSGRYDLKGGIED-R-- 198 (318)
Q Consensus 135 ~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~~v~~~~~~~~~~~~~~-~-- 198 (318)
+....+|+.++++|+.++ +.++++|+|+|+||.+++.++... +.++++++++|..+....... .
T Consensus 128 ~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~ 207 (318)
T PRK10162 128 FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLG 207 (318)
T ss_pred CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhC
Confidence 334478888888888654 456899999999999999988653 238999999987664321100 0
Q ss_pred -----hhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHh
Q 021050 199 -----LGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDK 273 (318)
Q Consensus 199 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~ 273 (318)
+.......+.. .+....... .+.+........ ...-.|+++++|+.|++.+ +++.+.+
T Consensus 208 ~~~~~l~~~~~~~~~~-~y~~~~~~~------------~~p~~~p~~~~l--~~~lPp~~i~~g~~D~L~d--e~~~~~~ 270 (318)
T PRK10162 208 GVWDGLTQQDLQMYEE-AYLSNDADR------------ESPYYCLFNNDL--TRDVPPCFIAGAEFDPLLD--DSRLLYQ 270 (318)
T ss_pred CCccccCHHHHHHHHH-HhCCCcccc------------CCcccCcchhhh--hcCCCCeEEEecCCCcCcC--hHHHHHH
Confidence 00000000000 000000000 000000000000 0124699999999999864 5555555
Q ss_pred hC----CCCEEEEECCCCccCCC------ChHHHHHHHHHHHHhhcC
Q 021050 274 II----PNHKLHVVEGANHGYTN------HQAELVSVVLDFVKASLK 310 (318)
Q Consensus 274 ~~----~~~~~~~~~~~gH~~~~------~~~~~~~~i~~fl~~~~~ 310 (318)
.+ ..+++++++|..|.+.. +..+..+.+.+||++.++
T Consensus 271 ~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 271 TLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 44 35799999999999742 234678888899988764
No 78
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.81 E-value=1.4e-18 Score=149.62 Aligned_cols=205 Identities=13% Similarity=0.123 Sum_probs=128.0
Q ss_pred CCeEEEEEccCCCCCCChhH-----HHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhH-HHHHHHHHHHHhC-CC
Q 021050 82 SSEIVVLCHGFRSTKDDPSM-----VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA-DDLRAVVQYFCGA-NR 154 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~-~d~~~~i~~l~~~-~~ 154 (318)
.+++||++||+.... +.+ +.++++|.++||+|+++|++|+|.+..... +.+++ +++.++++.+.+. +.
T Consensus 187 ~~~PlLiVp~~i~k~--yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g~ 261 (532)
T TIGR01838 187 HKTPLLIVPPWINKY--YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITGE 261 (532)
T ss_pred CCCcEEEECcccccc--eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcCC
Confidence 468899999998776 444 479999999999999999999998865443 23333 4567777776654 77
Q ss_pred CcEEEEEEechHHHHH----HHHhhc-CC-ccEEEEeccCccccch--hhhhhhHH---HH-HHHhccCCccc-------
Q 021050 155 AVGAILGHSKGGSVVL----LYASKY-ND-IRTFVNVSGRYDLKGG--IEDRLGKD---YM-EKIMQDGFIDV------- 215 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~----~~a~~~-p~-v~~~v~~~~~~~~~~~--~~~~~~~~---~~-~~~~~~~~~~~------- 215 (318)
++++++|||+||.++. .+++.. ++ |+++++++++.++... +....... .. ..+...++.+-
T Consensus 262 ~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F 341 (532)
T TIGR01838 262 KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTF 341 (532)
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHH
Confidence 8899999999999852 245554 65 9999999987765421 00000000 00 00000000000
Q ss_pred -----------------cCCCCc-----cee-----eec----hHHHHHhhccChHH---------HhhhccCCCcEEEE
Q 021050 216 -----------------KNKTGD-----VEY-----RVT----EESLMDRLNTNMHD---------ACLQIDMECSVLTI 255 (318)
Q Consensus 216 -----------------~~~~~~-----~~~-----~~~----~~~~~~~~~~~~~~---------~~~~~~~~~P~lii 255 (318)
...... ..| .+. .+.+.+.+..+... .....+|++|++++
T Consensus 342 ~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV 421 (532)
T TIGR01838 342 SLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYII 421 (532)
T ss_pred HhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEE
Confidence 000000 000 000 11111111111100 00112579999999
Q ss_pred EcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCC
Q 021050 256 HGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT 291 (318)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 291 (318)
.|++|.++|++.++.+.+.+++.+..+++++||..+
T Consensus 422 ~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 422 ATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAG 457 (532)
T ss_pred eeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchH
Confidence 999999999999999999999999999999999953
No 79
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.80 E-value=3e-18 Score=161.25 Aligned_cols=225 Identities=16% Similarity=0.159 Sum_probs=140.0
Q ss_pred CCeEEEEEccCCCCCCChhHHH-----HHHHHHHcCceEEEEcCCCCCCCCCCcc--CCChhhhHHHHHHHHHHHHhCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVN-----LAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADDLRAVVQYFCGANR 154 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~~g~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~ 154 (318)
.+++||++||++.+. +.|.. +.+.|.++||+|+++|+ |.++.... ..++.+.+..+.++++.++....
T Consensus 66 ~~~plllvhg~~~~~--~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSA--DMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCcEEEECCCCCCc--cceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 568999999999988 44654 48999999999999995 55554322 23555555556666665544445
Q ss_pred CcEEEEEEechHHHHHHHHhhc-CC-ccEEEEeccCccccch----hhhhh---h----H----------HH--------
Q 021050 155 AVGAILGHSKGGSVVLLYASKY-ND-IRTFVNVSGRYDLKGG----IEDRL---G----K----------DY-------- 203 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~----~~~~~---~----~----------~~-------- 203 (318)
++++++||||||.+++.+++.+ ++ |+++|+++++.+.... +.... . . .+
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 6899999999999999988755 44 9999998887654211 00000 0 0 00
Q ss_pred ------HH-------HHhccCCcccc----CCCCccee-ee---chHHHHHhhc-cChHHH---------hhhccCCCcE
Q 021050 204 ------ME-------KIMQDGFIDVK----NKTGDVEY-RV---TEESLMDRLN-TNMHDA---------CLQIDMECSV 252 (318)
Q Consensus 204 ------~~-------~~~~~~~~~~~----~~~~~~~~-~~---~~~~~~~~~~-~~~~~~---------~~~~~~~~P~ 252 (318)
.. .+....+.... .......| .. ....+...+. .+.... ....++++|+
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPV 300 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCE
Confidence 00 00000000000 00000000 00 0011111111 000000 0123678999
Q ss_pred EEEEcCCCCccCcchhHHHHhhCCCCEE-EEECCCCccCC----CChHHHHHHHHHHHHhhcCC
Q 021050 253 LTIHGSSDKIIPLQDAHEFDKIIPNHKL-HVVEGANHGYT----NHQAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 253 lii~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~----~~~~~~~~~i~~fl~~~~~~ 311 (318)
|+++|++|.++|++.++.+.+.+++.++ .+++++||+.+ ..+++++..|.+||.++-+.
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 9999999999999999999999999987 67899999943 34678999999999987654
No 80
>PLN02442 S-formylglutathione hydrolase
Probab=99.80 E-value=1.7e-17 Score=134.55 Aligned_cols=209 Identities=14% Similarity=0.146 Sum_probs=122.3
Q ss_pred eEEEEeCC-CCcEEEEEEe-cC----CCCeEEEEEccCCCCCCChhH-HHHHHHHHHcCceEEEEcCCCCCC-----CCC
Q 021050 61 QELVIPNK-YGERLVGVLH-DA----ESSEIVVLCHGFRSTKDDPSM-VNLAVALQNEGISAFRFDFAGNGE-----SEG 128 (318)
Q Consensus 61 ~~v~~~~~-~g~~l~~~~~-~~----~~~~~vv~~hG~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~g~G~-----s~~ 128 (318)
..+++.++ -|..+.+.++ ++ .+.|+|+++||++++.+.+.. ..+.+.+...|+.|+.+|..++|. +..
T Consensus 19 ~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~ 98 (283)
T PLN02442 19 RRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADS 98 (283)
T ss_pred EEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccc
Confidence 45555543 4556666554 32 257999999999988743211 334566777899999999877662 110
Q ss_pred -----Cc------cC-----CCh-hhhHHHHHHHHHHHH-hCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCc
Q 021050 129 -----SF------QY-----GNY-WREADDLRAVVQYFC-GANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 189 (318)
Q Consensus 129 -----~~------~~-----~~~-~~~~~d~~~~i~~l~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 189 (318)
.. .. ..+ ....+++...++... ..+.++++|+||||||+.|+.++.++|+ +++++++++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 99 WDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred cccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 00 00 011 112344444444432 2266789999999999999999999999 89999999876
Q ss_pred cccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhh-hccCCCcEEEEEcCCCCccCcc-h
Q 021050 190 DLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACL-QIDMECSVLTIHGSSDKIIPLQ-D 267 (318)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~lii~g~~D~~~~~~-~ 267 (318)
+..... .......... .. ........ +...... ....++|+++++|++|.+++.. .
T Consensus 179 ~~~~~~---~~~~~~~~~~----g~-------------~~~~~~~~--d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~ 236 (283)
T PLN02442 179 NPINCP---WGQKAFTNYL----GS-------------DKADWEEY--DATELVSKFNDVSATILIDQGEADKFLKEQLL 236 (283)
T ss_pred CcccCc---hhhHHHHHHc----CC-------------ChhhHHHc--ChhhhhhhccccCCCEEEEECCCCcccccccc
Confidence 543110 0011111110 00 00000111 1111000 1134789999999999998863 3
Q ss_pred hHHHHhhC----CCCEEEEECCCCccCC
Q 021050 268 AHEFDKII----PNHKLHVVEGANHGYT 291 (318)
Q Consensus 268 ~~~~~~~~----~~~~~~~~~~~gH~~~ 291 (318)
++.+.+.+ .++++++++|.+|.+.
T Consensus 237 s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 237 PENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 44444332 3578999999999964
No 81
>PLN00021 chlorophyllase
Probab=99.79 E-value=2.8e-17 Score=133.90 Aligned_cols=186 Identities=17% Similarity=0.209 Sum_probs=123.4
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC--------
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-------- 152 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-------- 152 (318)
++.|+||++||++.+. ..|..+++.|+++||.|+++|++|++.... ....++..++++|+...
T Consensus 50 g~~PvVv~lHG~~~~~--~~y~~l~~~Las~G~~VvapD~~g~~~~~~-------~~~i~d~~~~~~~l~~~l~~~l~~~ 120 (313)
T PLN00021 50 GTYPVLLFLHGYLLYN--SFYSQLLQHIASHGFIVVAPQLYTLAGPDG-------TDEIKDAAAVINWLSSGLAAVLPEG 120 (313)
T ss_pred CCCCEEEEECCCCCCc--ccHHHHHHHHHhCCCEEEEecCCCcCCCCc-------hhhHHHHHHHHHHHHhhhhhhcccc
Confidence 4679999999999887 458899999999999999999998643221 11234455555555431
Q ss_pred ---CCCcEEEEEEechHHHHHHHHhhcCC------ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcce
Q 021050 153 ---NRAVGAILGHSKGGSVVLLYASKYND------IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVE 223 (318)
Q Consensus 153 ---~~~~i~l~G~S~Gg~~a~~~a~~~p~------v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (318)
+.++++++|||+||.+++.+|..+++ ++++|+++|.......... ...
T Consensus 121 ~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~---------------------~p~-- 177 (313)
T PLN00021 121 VRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT---------------------PPP-- 177 (313)
T ss_pred cccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC---------------------CCc--
Confidence 34689999999999999999998863 7888888875432111000 000
Q ss_pred eeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCC-----c----cCcchh-HHHHhhCC-CCEEEEECCCCccCC-
Q 021050 224 YRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDK-----I----IPLQDA-HEFDKIIP-NHKLHVVEGANHGYT- 291 (318)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~-----~----~~~~~~-~~~~~~~~-~~~~~~~~~~gH~~~- 291 (318)
.. .+. ....++.+|+|++.+..|. . .|.... .++++.++ .+.+.+++++||+-+
T Consensus 178 -------il-~~~------~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~ 243 (313)
T PLN00021 178 -------VL-TYA------PHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDML 243 (313)
T ss_pred -------cc-ccC------cccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceee
Confidence 00 000 0001357899999998663 2 223333 66777664 577888999999943
Q ss_pred CCh-----------------------HHHHHHHHHHHHhhcCCC
Q 021050 292 NHQ-----------------------AELVSVVLDFVKASLKQD 312 (318)
Q Consensus 292 ~~~-----------------------~~~~~~i~~fl~~~~~~~ 312 (318)
++. +.+...+..||..++..+
T Consensus 244 ~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 244 DDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred cCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 221 235667888998887554
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.78 E-value=3.9e-18 Score=133.11 Aligned_cols=179 Identities=20% Similarity=0.278 Sum_probs=108.6
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHH-HHHHcCceEEEEcCCC------CCC---CCCC-----c----cCCChhhhHHH
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAV-ALQNEGISAFRFDFAG------NGE---SEGS-----F----QYGNYWREADD 141 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~~g------~G~---s~~~-----~----~~~~~~~~~~d 141 (318)
...++||++||+|.+. ..+..+.. .+......++.++-|. .|. +.-+ . ....+....+.
T Consensus 12 ~~~~lvi~LHG~G~~~--~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE--DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE--TTS-H--HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECCCCCCc--chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 4689999999999988 34444444 2222357777776542 122 1110 0 01122333455
Q ss_pred HHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCC
Q 021050 142 LRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNK 218 (318)
Q Consensus 142 ~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (318)
+.++|+...+. +.+++++.|+|.||++|+.++.++|+ +.++|.+++............
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~------------------- 150 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRP------------------- 150 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCH-------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccc-------------------
Confidence 56666654443 56789999999999999999999999 999999999664432211000
Q ss_pred CCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC----CCCEEEEECCCCccCCCCh
Q 021050 219 TGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII----PNHKLHVVEGANHGYTNHQ 294 (318)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~ 294 (318)
.. .-+.|++++||++|+++|.+.++...+.+ .+++++.|+|.||...
T Consensus 151 -------------------------~~-~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--- 201 (216)
T PF02230_consen 151 -------------------------EA-LAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--- 201 (216)
T ss_dssp -------------------------CC-CCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----
T ss_pred -------------------------cc-cCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---
Confidence 00 11579999999999999998887766554 3579999999999974
Q ss_pred HHHHHHHHHHHHhhc
Q 021050 295 AELVSVVLDFVKASL 309 (318)
Q Consensus 295 ~~~~~~i~~fl~~~~ 309 (318)
++..+.+.+||++++
T Consensus 202 ~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 202 PEELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhhC
Confidence 677888999998763
No 83
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.78 E-value=7.7e-17 Score=120.53 Aligned_cols=224 Identities=15% Similarity=0.207 Sum_probs=130.1
Q ss_pred EEeCCCCcEEEEEEecCC-----CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCccCCChhh
Q 021050 64 VIPNKYGERLVGVLHDAE-----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSFQYGNYWR 137 (318)
Q Consensus 64 ~~~~~~g~~l~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~-G~s~~~~~~~~~~~ 137 (318)
.+...+|..|..+-..|. .+++||+.+|++... ..+..++.+|+..||+|+.+|-..| |.|++.....++..
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrm--dh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~ 83 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRM--DHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSI 83 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGG--GGGHHHHHHHHTTT--EEEE---B-------------HHH
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHH--HHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHH
Confidence 344568999997766543 568999999999988 4599999999999999999999887 99999988888888
Q ss_pred hHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccC
Q 021050 138 EADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKN 217 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (318)
...++..+++|+...+..++.|+.-|+.|-+|+..|++- ++.-+|+.-+..++...+...++..++.... ...+.
T Consensus 84 g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i----~~lp~ 158 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPI----EQLPE 158 (294)
T ss_dssp HHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-G----GG--S
T ss_pred hHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcch----hhCCC
Confidence 899999999999988999999999999999999999854 6888888888877766555544443332111 11111
Q ss_pred CCCcceeeechHHHHH-hhccC----hHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC--CCEEEEECCCCccC
Q 021050 218 KTGDVEYRVTEESLMD-RLNTN----MHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP--NHKLHVVEGANHGY 290 (318)
Q Consensus 218 ~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~ 290 (318)
........+..+.+.. -+... .........+.+|++.+++++|.+|......++.+.+. .++++.++|+.|-+
T Consensus 159 dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 159 DLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp EEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred cccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 1111122233332222 12111 11112223569999999999999999999988888654 57899999999998
Q ss_pred CCCh
Q 021050 291 TNHQ 294 (318)
Q Consensus 291 ~~~~ 294 (318)
-+++
T Consensus 239 ~enl 242 (294)
T PF02273_consen 239 GENL 242 (294)
T ss_dssp TSSH
T ss_pred hhCh
Confidence 7765
No 84
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.77 E-value=3.8e-17 Score=144.64 Aligned_cols=128 Identities=20% Similarity=0.181 Sum_probs=102.0
Q ss_pred EeCCCCcEEEEEEecC---CCCeEEEEEccCCCCCC--ChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhH
Q 021050 65 IPNKYGERLVGVLHDA---ESSEIVVLCHGFRSTKD--DPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA 139 (318)
Q Consensus 65 ~~~~~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~ 139 (318)
|++.||.+|.+.++.+ ++.|+||++||++.+.. ..........|+++||.|+++|+||+|.|.+.....+ ...+
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~ 79 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEA 79 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccc
Confidence 3567999999877753 36789999999997642 0012235577889999999999999999998754433 5678
Q ss_pred HHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc
Q 021050 140 DDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG 193 (318)
Q Consensus 140 ~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 193 (318)
+|+.++++|+..+ ...+++++|+|+||.+++.+|..+|. ++++|..++..+...
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 9999999999876 33589999999999999999998877 999999888766543
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=2.1e-17 Score=128.67 Aligned_cols=171 Identities=14% Similarity=0.133 Sum_probs=107.5
Q ss_pred CCCeEEEEEccCCCCCCChhHH---HHHHHHHHcCceEEEEcCCCCCCCCCCccC------CChhhhHHHHHHHHHHHHh
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMV---NLAVALQNEGISAFRFDFAGNGESEGSFQY------GNYWREADDLRAVVQYFCG 151 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~------~~~~~~~~d~~~~i~~l~~ 151 (318)
++.|+||++||.+++... +. .+.+.+.+.||.|+++|++|++.+...... ........++..+++++..
T Consensus 11 ~~~P~vv~lHG~~~~~~~--~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 11 GPRALVLALHGCGQTASA--YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCEEEEeCCCCCCHHH--HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 367999999999987743 32 355566667999999999998754421110 0112346677888888876
Q ss_pred C---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc-hhhhhhhHHHHHHHhccCCccccCCCCcceeee
Q 021050 152 A---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-GIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRV 226 (318)
Q Consensus 152 ~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (318)
+ +.++++|+|||+||.+++.++.++|+ +.+++.+++...... ..... .... . . ..
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~-----~~~~-----~-~---------~~ 148 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISA-----TPQM-----C-T---------AA 148 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhh-----Hhhc-----C-C---------CC
Confidence 5 45689999999999999999999999 888888887643221 11000 0000 0 0 00
Q ss_pred chHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC
Q 021050 227 TEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP 276 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~ 276 (318)
....+.+...... ........|++++||++|.+||++.++.+.+.+.
T Consensus 149 ~~~~~~~~~~~~~---~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 149 TAASVCRLVRGMQ---SEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CHHHHHHHHhccC---CcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 0011111100000 0001224457899999999999999988877653
No 86
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=7.4e-17 Score=122.43 Aligned_cols=234 Identities=16% Similarity=0.132 Sum_probs=154.1
Q ss_pred ceeEEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC----c
Q 021050 59 KQQELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS----F 130 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~----~ 130 (318)
+.-+++++..+|.+|.+++.-| ++.|.||-.||.+++.. .|..+.. ++..||.|+.+|.||.|.|+.. +
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g--~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG--EWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC--Ccccccc-ccccceeEEEEecccCCCccccCCCCC
Confidence 5678999999999999998743 57799999999999984 3554443 3567999999999999888421 1
Q ss_pred cC-----------------CChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCcc
Q 021050 131 QY-----------------GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYD 190 (318)
Q Consensus 131 ~~-----------------~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 190 (318)
.. .-+.....|+..+++.+.+. +.++|.+.|.|.||.+++.+++..|.|++++++-|.+.
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~ 211 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLS 211 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccc
Confidence 00 01223357788888877766 67899999999999999999999999999999888764
Q ss_pred ccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHH
Q 021050 191 LKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHE 270 (318)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~ 270 (318)
-...+.+.........+.. + ...... ........+..-.. .....++++|+|+..|-.|+++|+.....
T Consensus 212 df~r~i~~~~~~~ydei~~--y---~k~h~~-----~e~~v~~TL~yfD~-~n~A~RiK~pvL~svgL~D~vcpPstqFA 280 (321)
T COG3458 212 DFPRAIELATEGPYDEIQT--Y---FKRHDP-----KEAEVFETLSYFDI-VNLAARIKVPVLMSVGLMDPVCPPSTQFA 280 (321)
T ss_pred cchhheeecccCcHHHHHH--H---HHhcCc-----hHHHHHHHHhhhhh-hhHHHhhccceEEeecccCCCCCChhhHH
Confidence 3322211111100000000 0 000000 01111111111100 11112679999999999999999999999
Q ss_pred HHhhCCC-CEEEEECCCCccCCCChHHHHHHHHHHHHhh
Q 021050 271 FDKIIPN-HKLHVVEGANHGYTNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 271 ~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 308 (318)
++++++. +++.+++.-+|.-. +.-..+.+..|++..
T Consensus 281 ~yN~l~~~K~i~iy~~~aHe~~--p~~~~~~~~~~l~~l 317 (321)
T COG3458 281 AYNALTTSKTIEIYPYFAHEGG--PGFQSRQQVHFLKIL 317 (321)
T ss_pred HhhcccCCceEEEeeccccccC--cchhHHHHHHHHHhh
Confidence 9988864 67888887778853 222344566776654
No 87
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.74 E-value=5.1e-16 Score=125.31 Aligned_cols=217 Identities=20% Similarity=0.244 Sum_probs=128.8
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
.|+++++||++++... |......+... .|+++.+|+||||.|. .. .......++++..+++.+ +..+++++
T Consensus 21 ~~~i~~~hg~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~ 93 (282)
T COG0596 21 GPPLVLLHGFPGSSSV--WRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDAL---GLEKVVLV 93 (282)
T ss_pred CCeEEEeCCCCCchhh--hHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHh---CCCceEEE
Confidence 5699999999998843 54432333222 1899999999999997 11 122333377777777766 66679999
Q ss_pred EEechHHHHHHHHhhcCC-ccEEEEeccCcccc------------chhhhhh--h-----HHHHHHHhccC-CccccC--
Q 021050 161 GHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK------------GGIEDRL--G-----KDYMEKIMQDG-FIDVKN-- 217 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~------------~~~~~~~--~-----~~~~~~~~~~~-~~~~~~-- 217 (318)
|||+||.+++.++.++|+ +++++++++..... ....... . ........... ......
T Consensus 94 G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (282)
T COG0596 94 GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAA 173 (282)
T ss_pred EecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccc
Confidence 999999999999999998 99999998754300 0000000 0 00000000000 000000
Q ss_pred ---CCCcce--eeechHH----HH----HhhccChH---HHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC-CEE
Q 021050 218 ---KTGDVE--YRVTEES----LM----DRLNTNMH---DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKL 280 (318)
Q Consensus 218 ---~~~~~~--~~~~~~~----~~----~~~~~~~~---~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~ 280 (318)
...... ....... .. ........ .......+.+|+++++|++|.+.+......+.+..++ .++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~ 253 (282)
T COG0596 174 RAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARL 253 (282)
T ss_pred hhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceE
Confidence 000000 0000000 00 00000000 1111225679999999999966665556677777775 899
Q ss_pred EEECCCCccCC-CChHHHHHHHHHHHH
Q 021050 281 HVVEGANHGYT-NHQAELVSVVLDFVK 306 (318)
Q Consensus 281 ~~~~~~gH~~~-~~~~~~~~~i~~fl~ 306 (318)
.+++++||..+ ++++.+.+.+.+|+.
T Consensus 254 ~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 254 VVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred EEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 99999999974 677778777777443
No 88
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.72 E-value=6.7e-16 Score=115.51 Aligned_cols=183 Identities=16% Similarity=0.223 Sum_probs=116.7
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcC--ceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEG--ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
++++||+.++..+.....+.+.+.+.+ ..+..+|++ .......+.+.++++.. ..+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~---~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEEL---KPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhC---CCCCeEEEEEC
Confidence 799999999998766777888888765 456666665 22333345555555544 44559999999
Q ss_pred chHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHh
Q 021050 164 KGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDAC 243 (318)
Q Consensus 164 ~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (318)
|||+.|..+|.+++ +++ |+++|.+.+...+...++...... ....+.+..............
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~-------------~~e~~~~~~~~~~~l~~l~~~--- 129 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPY-------------TGESYELTEEHIEELKALEVP--- 129 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCC-------------CCccceechHhhhhcceEecc---
Confidence 99999999998875 444 889998887666554443311100 011111121111111100000
Q ss_pred hhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHH
Q 021050 244 LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFV 305 (318)
Q Consensus 244 ~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl 305 (318)
......+++++.++.|++++...+. +.+.++...+.+|++|.+. +-++....|.+|+
T Consensus 130 -~~~~~~~~lvll~~~DEvLd~~~a~---~~~~~~~~~i~~ggdH~f~-~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 130 -YPTNPERYLVLLQTGDEVLDYREAV---AKYRGCAQIIEEGGDHSFQ-DFEEYLPQIIAFL 186 (187)
T ss_pred -ccCCCccEEEEEecCCcccCHHHHH---HHhcCceEEEEeCCCCCCc-cHHHHHHHHHHhh
Confidence 0123679999999999999885443 3445566667788899974 4567777888886
No 89
>COG0400 Predicted esterase [General function prediction only]
Probab=99.69 E-value=9.8e-16 Score=116.00 Aligned_cols=173 Identities=17% Similarity=0.266 Sum_probs=114.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC--CCCCC-------CCccCCChhhhHHHHHHHHHHHHhC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG--NGESE-------GSFQYGNYWREADDLRAVVQYFCGA 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g--~G~s~-------~~~~~~~~~~~~~d~~~~i~~l~~~ 152 (318)
..|+||++||+|++.. .+..+.+.+..+ +.++.+.-+- .|... +.....++....+.+.+.++.+...
T Consensus 17 ~~~~iilLHG~Ggde~--~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 17 AAPLLILLHGLGGDEL--DLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCcEEEEEecCCCChh--hhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 5678999999998874 355555555444 5555543221 11110 1111112222233344444443333
Q ss_pred ---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeech
Q 021050 153 ---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTE 228 (318)
Q Consensus 153 ---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
+.++++++|+|.||++++.+..++|. ++++|+++|...........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~------------------------------ 143 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPD------------------------------ 143 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccc------------------------------
Confidence 45799999999999999999999998 99999999866543210000
Q ss_pred HHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEEEECCCCccCCCChHHHHHHHHHH
Q 021050 229 ESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYTNHQAELVSVVLDF 304 (318)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~f 304 (318)
....|+++++|+.|+++|...+.++.+.+. +++...++ .||... ++..+.+.+|
T Consensus 144 ------------------~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~---~e~~~~~~~w 201 (207)
T COG0400 144 ------------------LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP---PEELEAARSW 201 (207)
T ss_pred ------------------cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC---HHHHHHHHHH
Confidence 126799999999999999988877776553 57888888 799974 5667778889
Q ss_pred HHhhc
Q 021050 305 VKASL 309 (318)
Q Consensus 305 l~~~~ 309 (318)
+.+..
T Consensus 202 l~~~~ 206 (207)
T COG0400 202 LANTL 206 (207)
T ss_pred HHhcc
Confidence 87653
No 90
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.67 E-value=2.7e-14 Score=110.21 Aligned_cols=124 Identities=19% Similarity=0.205 Sum_probs=95.4
Q ss_pred eEEEEeCCCCcE--EEEEEecC---C-CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-CC
Q 021050 61 QELVIPNKYGER--LVGVLHDA---E-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YG 133 (318)
Q Consensus 61 ~~v~~~~~~g~~--l~~~~~~~---~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~ 133 (318)
..+.+...+|.. +.+.|... + +..+||-+||.+|+..+ ++.+...|.+.|++++.++|||+|.+++... ..
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~ 84 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQY 84 (297)
T ss_pred EEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCccccc
Confidence 344555555544 44455542 2 34589999999999954 9999999999999999999999999998664 33
Q ss_pred ChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCc
Q 021050 134 NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRY 189 (318)
Q Consensus 134 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~ 189 (318)
+-.+...-+.++++.|.-. ++++.+|||.||-.|+.+|..+| ..|+++++|+-
T Consensus 85 ~n~er~~~~~~ll~~l~i~--~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G 137 (297)
T PF06342_consen 85 TNEERQNFVNALLDELGIK--GKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPG 137 (297)
T ss_pred ChHHHHHHHHHHHHHcCCC--CceEEEEeccchHHHHHHHhcCc-cceEEEecCCc
Confidence 4455677788888877432 57899999999999999999997 56899998753
No 91
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.67 E-value=8.5e-15 Score=117.24 Aligned_cols=223 Identities=16% Similarity=0.167 Sum_probs=139.0
Q ss_pred CCeEEEEEccCCCCCCChhHHH-HHHHHHHcCceEEEEcCCCCCCCCCCccCCC----h-------hhhHHHHHHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVN-LAVALQNEGISAFRFDFAGNGESEGSFQYGN----Y-------WREADDLRAVVQYF 149 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~----~-------~~~~~d~~~~i~~l 149 (318)
.+|++|.++|.|.+.- +.-.. ++..|.++|+..+.+..|.||.........+ . ...+.+...++.|+
T Consensus 91 ~rp~~IhLagTGDh~f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGF-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCCCccch-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 5889999999998763 12223 4888988999999999999998775432221 1 22357788999999
Q ss_pred HhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccc---cch-hhhhhhHHHHH-HHhccCCccccCCCCc--
Q 021050 150 CGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL---KGG-IEDRLGKDYME-KIMQDGFIDVKNKTGD-- 221 (318)
Q Consensus 150 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~---~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 221 (318)
..++..++++.|.||||.+|..+|+..|. +..+-++++.... ..+ +........+. .+....+.+.......
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 99988999999999999999999999998 5555555543321 111 11112211111 1111111111000000
Q ss_pred --------ceeeechHHHHHhhc-cChHHHhhh---ccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCcc
Q 021050 222 --------VEYRVTEESLMDRLN-TNMHDACLQ---IDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHG 289 (318)
Q Consensus 222 --------~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 289 (318)
.......+....... .+....... ..-.-.+.+|.+++|..||.+....+.+.+|++++..++| ||.
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHV 328 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHV 328 (348)
T ss_pred ccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcE
Confidence 000001111111000 000000000 0113358889999999999999999999999999999997 999
Q ss_pred --CCCChHHHHHHHHHHHH
Q 021050 290 --YTNHQAELVSVVLDFVK 306 (318)
Q Consensus 290 --~~~~~~~~~~~i~~fl~ 306 (318)
++.+.+.+.+.|.+=++
T Consensus 329 sA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 329 SAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EEeeechHHHHHHHHHHhh
Confidence 45777888888887664
No 92
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.66 E-value=6e-15 Score=109.18 Aligned_cols=186 Identities=16% Similarity=0.232 Sum_probs=135.4
Q ss_pred EEEEEecCCC-CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC-CCCCCCC-Cc-------cCCChhhhHHHH
Q 021050 73 LVGVLHDAES-SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA-GNGESEG-SF-------QYGNYWREADDL 142 (318)
Q Consensus 73 l~~~~~~~~~-~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~-g~G~s~~-~~-------~~~~~~~~~~d~ 142 (318)
+.+|..+..+ +..||.+--..+... ...+..+..++..||.|++||+- |--.+.. .. ...+......++
T Consensus 28 ldaYv~gs~~~~~~li~i~DvfG~~~-~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i 106 (242)
T KOG3043|consen 28 LDAYVVGSTSSKKVLIVIQDVFGFQF-PNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDI 106 (242)
T ss_pred eeEEEecCCCCCeEEEEEEeeecccc-HHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHH
Confidence 4555655543 346777776665553 23678899999999999999974 3111111 11 112334447899
Q ss_pred HHHHHHHHhCC-CCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCc
Q 021050 143 RAVVQYFCGAN-RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGD 221 (318)
Q Consensus 143 ~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (318)
..++++++.++ ..+|.++|+|+||.++..+.+..|++.+++..-|.+......
T Consensus 107 ~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D~-------------------------- 160 (242)
T KOG3043|consen 107 TAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADI-------------------------- 160 (242)
T ss_pred HHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhHH--------------------------
Confidence 99999999885 789999999999999999999888888888877754321111
Q ss_pred ceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC-----CEEEEECCCCccCCC----
Q 021050 222 VEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-----HKLHVVEGANHGYTN---- 292 (318)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~---- 292 (318)
..+++|++++.|+.|..+|++....+.+.+.+ .++.+|+|.+|.++.
T Consensus 161 ------------------------~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~ 216 (242)
T KOG3043|consen 161 ------------------------ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRAN 216 (242)
T ss_pred ------------------------hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccC
Confidence 14589999999999999999988887776642 369999999999862
Q ss_pred --C------hHHHHHHHHHHHHhhc
Q 021050 293 --H------QAELVSVVLDFVKASL 309 (318)
Q Consensus 293 --~------~~~~~~~i~~fl~~~~ 309 (318)
. .++..+.+.+|+++++
T Consensus 217 ~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 217 ISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhh
Confidence 1 2567888899998875
No 93
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.65 E-value=1e-15 Score=113.40 Aligned_cols=154 Identities=14% Similarity=0.170 Sum_probs=97.6
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEech
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 165 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 165 (318)
|+++||++++.....+..+.+.|... ++|-.+++. ..+.+.+...+...+..+ .+++++||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------~P~~~~W~~~l~~~i~~~----~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------NPDLDEWVQALDQAIDAI----DEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------S--HHHHHHHHHHCCHC-----TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------CCCHHHHHHHHHHHHhhc----CCCeEEEEeCHH
Confidence 68999999998766667777888776 777776661 124455555555555433 345999999999
Q ss_pred HHHHHHHHh-hcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHh
Q 021050 166 GSVVLLYAS-KYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDAC 243 (318)
Q Consensus 166 g~~a~~~a~-~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (318)
+..++.+++ .... |.++++++|+....... ...... .+...
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~----------------~~~~~~----------------~f~~~----- 108 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPDDPEP----------------FPPELD----------------GFTPL----- 108 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCGCHHC----------------CTCGGC----------------CCTTS-----
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcccccc----------------hhhhcc----------------ccccC-----
Confidence 999999994 4444 99999999975420000 000000 00000
Q ss_pred hhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCC
Q 021050 244 LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTN 292 (318)
Q Consensus 244 ~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 292 (318)
......+|.+++.+++|+++|.+.++.+++.+ +++++.++++||+...
T Consensus 109 p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 109 PRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAA 156 (171)
T ss_dssp HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGG
T ss_pred cccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccc
Confidence 00022567799999999999999999999988 7999999999999643
No 94
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.64 E-value=2.6e-15 Score=111.41 Aligned_cols=238 Identities=16% Similarity=0.145 Sum_probs=138.7
Q ss_pred EEEeCCCCcEEEEEEecCC-CCe-EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc---CCChhh
Q 021050 63 LVIPNKYGERLVGVLHDAE-SSE-IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ---YGNYWR 137 (318)
Q Consensus 63 v~~~~~~g~~l~~~~~~~~-~~~-~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~---~~~~~~ 137 (318)
..++..||..+.+..++.. +.+ .++.-.+.+... .+++.++..++++||.|+.+||||.|.|..... ...+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~--~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQ--YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcch--hHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 6788889999999888754 333 344444444444 689999999999999999999999999986543 245555
Q ss_pred h-HHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhh--hhhHHHHHHHhccCCc
Q 021050 138 E-ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIED--RLGKDYMEKIMQDGFI 213 (318)
Q Consensus 138 ~-~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 213 (318)
+ ..|+.++++++++. ...+...+|||+||.+.-.+. +++...+....+........+.. ......+-.+......
T Consensus 86 wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt 164 (281)
T COG4757 86 WARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLT 164 (281)
T ss_pred hhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCcccceeeEeccccccccchhhhhcccceeeccccccchh
Confidence 5 46999999999775 445789999999998766643 34443333322222111111110 0000000000000000
Q ss_pred cccCCCCc----ceeeechHHHH--Hhh-------ccC-----hHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC
Q 021050 214 DVKNKTGD----VEYRVTEESLM--DRL-------NTN-----MHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII 275 (318)
Q Consensus 214 ~~~~~~~~----~~~~~~~~~~~--~~~-------~~~-----~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~ 275 (318)
-+.....+ .........+. .++ ..+ ..... .++.+|+.++...+|+.+|+...+.+.+..
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~y--aaVrtPi~~~~~~DD~w~P~As~d~f~~~y 242 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVY--AAVRTPITFSRALDDPWAPPASRDAFASFY 242 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHH--HHhcCceeeeccCCCCcCCHHHHHHHHHhh
Confidence 00000000 00000000000 000 000 01111 156899999999999999999999999988
Q ss_pred CCCE--EEEECC----CCccC-CCCh-HHHHHHHHHHH
Q 021050 276 PNHK--LHVVEG----ANHGY-TNHQ-AELVSVVLDFV 305 (318)
Q Consensus 276 ~~~~--~~~~~~----~gH~~-~~~~-~~~~~~i~~fl 305 (318)
+++. ...++. .||+- +-++ |.+++.+++|+
T Consensus 243 ~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 243 RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 8754 444443 58993 4444 77888888886
No 95
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.62 E-value=8.7e-14 Score=109.91 Aligned_cols=218 Identities=18% Similarity=0.224 Sum_probs=90.2
Q ss_pred CCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC----CCCCCCCCccCCChhhhHHHHHHHHHHHHhC----
Q 021050 82 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA----GNGESEGSFQYGNYWREADDLRAVVQYFCGA---- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~----g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---- 152 (318)
+..+|||+.|++..-.. .+...+++.|...||.++-+.++ |+|. .++++.++|+.++++||+..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhhccc
Confidence 56789999999876543 67889999998889999999766 4443 35777799999999999987
Q ss_pred -CCCcEEEEEEechHHHHHHHHhhcC------CccEEEEeccCccccchhhhhhh----H---HHHHHHhccCCccc-cC
Q 021050 153 -NRAVGAILGHSKGGSVVLLYASKYN------DIRTFVNVSGRYDLKGGIEDRLG----K---DYMEKIMQDGFIDV-KN 217 (318)
Q Consensus 153 -~~~~i~l~G~S~Gg~~a~~~a~~~p------~v~~~v~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~-~~ 217 (318)
+.++|+|+|||.|+.-++.++.... .|+++|+-+|..+.+......-. . ...+.+...+..+. ..
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 4679999999999999999988752 29999999997765432221110 1 11222221111111 00
Q ss_pred -CCC-cc--eeeechHHHHHhh---------ccC---hHHHhhhccCCCcEEEEEcCCCCccCcchh-HHHHhhCCC---
Q 021050 218 -KTG-DV--EYRVTEESLMDRL---------NTN---MHDACLQIDMECSVLTIHGSSDKIIPLQDA-HEFDKIIPN--- 277 (318)
Q Consensus 218 -~~~-~~--~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~P~lii~g~~D~~~~~~~~-~~~~~~~~~--- 277 (318)
... .. ...++...+.... ..+ .......-.+.+|+|++.+.+|+.+|...- +.+.+++..
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 000 00 1122222222211 111 111111125688999999999999986432 334444332
Q ss_pred -----CEEEEECCCCccCCCCh-----HHHHHHHHHHHH
Q 021050 278 -----HKLHVVEGANHGYTNHQ-----AELVSVVLDFVK 306 (318)
Q Consensus 278 -----~~~~~~~~~gH~~~~~~-----~~~~~~i~~fl~ 306 (318)
..-.++||++|.+-... +.+.+.|..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 23458999999975322 356777788774
No 96
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.62 E-value=2.9e-14 Score=129.22 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=128.3
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-----------------CCCcEEEEEEech
Q 021050 103 NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-----------------NRAVGAILGHSKG 165 (318)
Q Consensus 103 ~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----------------~~~~i~l~G~S~G 165 (318)
.+.++|..+||.|+.+|.||.|.|++.....+ ....+|..++|+|+..+ ...+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 46688999999999999999999998764332 56789999999999843 1468999999999
Q ss_pred HHHHHHHHhhcCC-ccEEEEeccCccccchhhhh--------h-h--HHHHHHHhccCCccccCC-CCcceeeechHHHH
Q 021050 166 GSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR--------L-G--KDYMEKIMQDGFIDVKNK-TGDVEYRVTEESLM 232 (318)
Q Consensus 166 g~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~--------~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 232 (318)
|.+++.+|...|. ++++|..++..+........ . + ...+.............. .....+......+.
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhh
Confidence 9999999888766 99999988765433211110 0 0 000000000000000000 00000000000000
Q ss_pred H---h--------hcc-ChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEEEECCCCccCC--CCh
Q 021050 233 D---R--------LNT-NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYT--NHQ 294 (318)
Q Consensus 233 ~---~--------~~~-~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~~ 294 (318)
. . +.. +.... ..++++|+|+++|..|..+++.++.++++.+. ..++.+.+ ++|... ...
T Consensus 429 ~~~~~~~~~y~~fW~~rn~~~~--~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~ 505 (767)
T PRK05371 429 AAQDRKTGDYNDFWDDRNYLKD--ADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQS 505 (767)
T ss_pred hhhhhcCCCccHHHHhCCHhhH--hhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhH
Confidence 0 0 000 00111 12679999999999999999888877776653 35666655 578753 234
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 021050 295 AELVSVVLDFVKASLKQD 312 (318)
Q Consensus 295 ~~~~~~i~~fl~~~~~~~ 312 (318)
.++.+.+.+|+.+++...
T Consensus 506 ~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 506 IDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred HHHHHHHHHHHHhccccC
Confidence 578899999999998654
No 97
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.62 E-value=2e-14 Score=116.31 Aligned_cols=122 Identities=20% Similarity=0.252 Sum_probs=91.1
Q ss_pred CCcEEEEEEecC-----CCCeEEEEEccCCCCCCChhHHHH----------HHHHHHcCceEEEEcCCCCCCCCCCccCC
Q 021050 69 YGERLVGVLHDA-----ESSEIVVLCHGFRSTKDDPSMVNL----------AVALQNEGISAFRFDFAGNGESEGSFQYG 133 (318)
Q Consensus 69 ~g~~l~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~----------~~~l~~~G~~v~~~d~~g~G~s~~~~~~~ 133 (318)
||++|.+.++.| ++.|+||..|+++.... ..... ...++++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~--~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQ--TASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC---HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCC--cccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 788999887755 26789999999996541 11111 12388999999999999999999987544
Q ss_pred ChhhhHHHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc
Q 021050 134 NYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG 193 (318)
Q Consensus 134 ~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 193 (318)
.....+|..++|+|+..+ ...+|.++|.|++|..++.+|+..|. +++++...+..+...
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 577899999999999988 33589999999999999999995554 999999988776654
No 98
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.62 E-value=1.6e-15 Score=118.29 Aligned_cols=99 Identities=20% Similarity=0.242 Sum_probs=73.9
Q ss_pred EEEEccCCCCCCC-hhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC------CCCcE
Q 021050 86 VVLCHGFRSTKDD-PSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA------NRAVG 157 (318)
Q Consensus 86 vv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~i 157 (318)
||++||++....+ .....++..+++ .|+.|+.+|||- .+...+.+..+|+.++++|+.++ +.++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl-------~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRL-------APEAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE----------TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccc-------cccccccccccccccceeeeccccccccccccce
Confidence 7999999855432 234556666665 899999999993 23346778899999999999886 45799
Q ss_pred EEEEEechHHHHHHHHhhc-----CCccEEEEeccCccc
Q 021050 158 AILGHSKGGSVVLLYASKY-----NDIRTFVNVSGRYDL 191 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~~-----p~v~~~v~~~~~~~~ 191 (318)
+|+|+|.||.+++.++... +.++++++++|..++
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999988754 228999999997665
No 99
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.62 E-value=1.4e-13 Score=96.20 Aligned_cols=179 Identities=18% Similarity=0.225 Sum_probs=119.7
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC-----CCCccCCChhhhHHHHHHHHHHHHhC-CCCc
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES-----EGSFQYGNYWREADDLRAVVQYFCGA-NRAV 156 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s-----~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~ 156 (318)
.-+||+.||.|.+.++......+..|+.+|+.|..++++..-.. ..++...+. .......+..++.. ...+
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~---~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTL---NPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccC---CHHHHHHHHHHHhcccCCc
Confidence 45799999999999988899999999999999999999864221 112211121 11122222233333 4457
Q ss_pred EEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhh
Q 021050 157 GAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRL 235 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (318)
+++-|+||||-++.+++..... |+++++++-++......... .
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~-R----------------------------------- 134 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQL-R----------------------------------- 134 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccc-h-----------------------------------
Confidence 9999999999999999887655 99999998766543211100 0
Q ss_pred ccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCC-----------hHHHHHHHHHH
Q 021050 236 NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNH-----------QAELVSVVLDF 304 (318)
Q Consensus 236 ~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----------~~~~~~~i~~f 304 (318)
......++.|++|.+|+.|++-..+.... +...+..+++.++++.|.+-.. -...++.|..|
T Consensus 135 ------t~HL~gl~tPtli~qGtrD~fGtr~~Va~-y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~ 207 (213)
T COG3571 135 ------TEHLTGLKTPTLITQGTRDEFGTRDEVAG-YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGW 207 (213)
T ss_pred ------hhhccCCCCCeEEeecccccccCHHHHHh-hhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHH
Confidence 00001458899999999999976655522 2233568999999999986311 13456677777
Q ss_pred HHh
Q 021050 305 VKA 307 (318)
Q Consensus 305 l~~ 307 (318)
..+
T Consensus 208 ~~~ 210 (213)
T COG3571 208 ARR 210 (213)
T ss_pred Hhh
Confidence 764
No 100
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.61 E-value=1.9e-13 Score=111.12 Aligned_cols=228 Identities=15% Similarity=0.159 Sum_probs=132.3
Q ss_pred ceeEEEEeCCCCcEEEEEEecC------CCCeEEEEEccCCCCC---CChhHHHHHHHHH-HcCceEEEEcCCCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA------ESSEIVVLCHGFRSTK---DDPSMVNLAVALQ-NEGISAFRFDFAGNGESEG 128 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~------~~~~~vv~~hG~~~~~---~~~~~~~~~~~l~-~~G~~v~~~d~~g~G~s~~ 128 (318)
...++.+....+ +..+++.+ ...|.|||+||+|.-. ....+..+...++ +.+..|+.+|||-
T Consensus 62 ~~~dv~~~~~~~--l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL------ 133 (336)
T KOG1515|consen 62 TSKDVTIDPFTN--LPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL------ 133 (336)
T ss_pred eeeeeEecCCCC--eEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc------
Confidence 345666655445 44445543 3568999999998332 3356778888874 4589999999993
Q ss_pred CccCCChhhhHHHHHHHHHHHHhC-------CCCcEEEEEEechHHHHHHHHhhc-------CCccEEEEeccCccccch
Q 021050 129 SFQYGNYWREADDLRAVVQYFCGA-------NRAVGAILGHSKGGSVVLLYASKY-------NDIRTFVNVSGRYDLKGG 194 (318)
Q Consensus 129 ~~~~~~~~~~~~d~~~~i~~l~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~~v~~~~~~~~~~~ 194 (318)
.++..+....+|..+++.|+.++ +..+++|+|-|.||.+|..+|.+. +.+++.|++.|.+.....
T Consensus 134 -APEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 134 -APEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred -CCCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 23333444456666677666653 778999999999999998877653 239999999998765433
Q ss_pred hhhhhh----------HH----HHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCC
Q 021050 195 IEDRLG----------KD----YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSD 260 (318)
Q Consensus 195 ~~~~~~----------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D 260 (318)
...... .. +...+.......... ........ ....+ . ....-.|+|++.++.|
T Consensus 213 ~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~---p~~np~~~-----~~~~d----~-~~~~lp~tlv~~ag~D 279 (336)
T KOG1515|consen 213 TESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDH---PFINPVGN-----SLAKD----L-SGLGLPPTLVVVAGYD 279 (336)
T ss_pred CCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCC---cccccccc-----ccccC----c-cccCCCceEEEEeCch
Confidence 221110 00 111111111110000 00000000 00000 0 0011346999999999
Q ss_pred CccCc--chhHHHHhhCCCCEEEEECCCCccCC--C----ChHHHHHHHHHHHHhh
Q 021050 261 KIIPL--QDAHEFDKIIPNHKLHVVEGANHGYT--N----HQAELVSVVLDFVKAS 308 (318)
Q Consensus 261 ~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~--~----~~~~~~~~i~~fl~~~ 308 (318)
...+. ..++++.+.--+.++..++++.|.++ . ...++.+.+.+|+++.
T Consensus 280 ~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 280 VLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 88642 22334433333466778999999963 1 2346788888888764
No 101
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.60 E-value=1.9e-14 Score=120.90 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=83.7
Q ss_pred CCCeEEEEEccCCCCCCChhHH-HHHHHHHH--cCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC---CC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMV-NLAVALQN--EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NR 154 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~-~~~~~l~~--~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~ 154 (318)
.++|++|++||++.+.....|. .+.+.|.. ..++|+++|++|+|.+............++++.+++++|... +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 3578999999998754211244 35655542 259999999999998765433334456678889999988543 46
Q ss_pred CcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcc
Q 021050 155 AVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 190 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 190 (318)
++++|+||||||++|..++...|+ |.++++++|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 799999999999999999998887 999999998643
No 102
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.60 E-value=2.4e-13 Score=113.08 Aligned_cols=219 Identities=13% Similarity=0.135 Sum_probs=136.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
|+|+++..+.++.. ...+.+.+.|.. |+.|+..|+..-+..+......+++++++.+.++++.+ +.+ ++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~-~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~---G~~-v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYA-TLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL---GPD-IHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHH-HHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh---CCC-CcEEEEc
Confidence 78999999886663 245788899988 99999999987775543334457777787788888777 555 9999999
Q ss_pred chHHHHHHHHhhc-----CC-ccEEEEeccCccccch--hhhhhh----HHHHHHHhccC-------Cc--ccc------
Q 021050 164 KGGSVVLLYASKY-----ND-IRTFVNVSGRYDLKGG--IEDRLG----KDYMEKIMQDG-------FI--DVK------ 216 (318)
Q Consensus 164 ~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~-------~~--~~~------ 216 (318)
+||..++.+++.+ |. ++.+++++++.+.... ....+. -.+........ .. ..+
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~ 256 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLA 256 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHH
Confidence 9999977766655 54 9999999998886542 111110 01111111000 00 000
Q ss_pred -----CCC--Ccceee----e---c------hHHHHH---------------hh----ccChHHH---------hhhccC
Q 021050 217 -----NKT--GDVEYR----V---T------EESLMD---------------RL----NTNMHDA---------CLQIDM 248 (318)
Q Consensus 217 -----~~~--~~~~~~----~---~------~~~~~~---------------~~----~~~~~~~---------~~~~~~ 248 (318)
+.. ....+. + . ...+.+ .+ ..+.... ....+|
T Consensus 257 ~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 257 GFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAI 336 (406)
T ss_pred HHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHC
Confidence 000 000000 0 0 000000 00 0000000 000257
Q ss_pred C-CcEEEEEcCCCCccCcchhHHHHhhC---C--CCEEEEECCCCccC-C---CChHHHHHHHHHHHHhh
Q 021050 249 E-CSVLTIHGSSDKIIPLQDAHEFDKII---P--NHKLHVVEGANHGY-T---NHQAELVSVVLDFVKAS 308 (318)
Q Consensus 249 ~-~P~lii~g~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~-~---~~~~~~~~~i~~fl~~~ 308 (318)
+ +|+|.+.|++|.++++.+++.+.+.+ + +++.+..+++||.- + ...++++..|.+||.++
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 8 99999999999999999999988874 4 35577777899994 3 23578999999999763
No 103
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=5.1e-14 Score=112.88 Aligned_cols=235 Identities=16% Similarity=0.224 Sum_probs=134.2
Q ss_pred CcEEEEEEecC---CCCeEEEEEccCCCCCCCh---------hHHHHH---HHHHHcCceEEEEcCCCCC-CCCCCcc--
Q 021050 70 GERLVGVLHDA---ESSEIVVLCHGFRSTKDDP---------SMVNLA---VALQNEGISAFRFDFAGNG-ESEGSFQ-- 131 (318)
Q Consensus 70 g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~~g~G-~s~~~~~-- 131 (318)
+..+.+..++. ....+|+++|++.++.... +|..+. +.+.-..|.||+.|..|.+ .|.++.+
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 34444444432 3567999999999876421 333333 2233334899999999875 3333221
Q ss_pred -----------CCChhhhHHHHHHHHHHHHhCCCCcEE-EEEEechHHHHHHHHhhcCC-ccEEEEeccCccccch---h
Q 021050 132 -----------YGNYWREADDLRAVVQYFCGANRAVGA-ILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG---I 195 (318)
Q Consensus 132 -----------~~~~~~~~~d~~~~i~~l~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~---~ 195 (318)
..++.+++.--..+++.| +.+++. ++|-||||+.++.++..+|+ |..+|.+++....... +
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~L---GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~ 191 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDAL---GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF 191 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhc---CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH
Confidence 122333333334444555 888885 99999999999999999999 8888888774322110 0
Q ss_pred hh-----------------------hhhHHHHHHHhccCCcccc------CC---CCcc---eeeechHHHH--------
Q 021050 196 ED-----------------------RLGKDYMEKIMQDGFIDVK------NK---TGDV---EYRVTEESLM-------- 232 (318)
Q Consensus 196 ~~-----------------------~~~~~~~~~~~~~~~~~~~------~~---~~~~---~~~~~~~~~~-------- 232 (318)
.. .-+-...+.+....+.... .+ .... ...+..+...
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~ 271 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFV 271 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHH
Confidence 00 0000111111100000000 00 0000 0011111111
Q ss_pred HhhccChHHHhh------------------hccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCE-EEEEC-CCCcc-CC
Q 021050 233 DRLNTNMHDACL------------------QIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHK-LHVVE-GANHG-YT 291 (318)
Q Consensus 233 ~~~~~~~~~~~~------------------~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~-~~ 291 (318)
.++..+...... ..++++|++++.-+.|..+|++..+++.+.++.+. +++++ ..||. |+
T Consensus 272 ~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL 351 (368)
T COG2021 272 ARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFL 351 (368)
T ss_pred hccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhh
Confidence 111111110000 12578999999999999999999999999998766 76665 47998 56
Q ss_pred CChHHHHHHHHHHHHh
Q 021050 292 NHQAELVSVVLDFVKA 307 (318)
Q Consensus 292 ~~~~~~~~~i~~fl~~ 307 (318)
.+.+.+...|.+||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 7777888999999874
No 104
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.59 E-value=6.3e-13 Score=109.96 Aligned_cols=215 Identities=14% Similarity=0.139 Sum_probs=129.1
Q ss_pred CCCcEEEEEEecC--C---CCeEEEEEccCCCCCCC-hhH-HHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHH
Q 021050 68 KYGERLVGVLHDA--E---SSEIVVLCHGFRSTKDD-PSM-VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREAD 140 (318)
Q Consensus 68 ~~g~~l~~~~~~~--~---~~~~vv~~hG~~~~~~~-~~~-~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 140 (318)
.++..+.+..+.+ . +.|+||++||++....+ ... ..+...+...|+.|+.+|||- .+...+....+
T Consensus 59 ~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrl-------aPe~~~p~~~~ 131 (312)
T COG0657 59 PSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRL-------APEHPFPAALE 131 (312)
T ss_pred CCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCC-------CCCCCCCchHH
Confidence 3444445555543 2 47999999999854432 123 455566677899999999993 33345666788
Q ss_pred HHHHHHHHHHhC------CCCcEEEEEEechHHHHHHHHhhcC-----CccEEEEeccCccccch---hhh-----hhhH
Q 021050 141 DLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYN-----DIRTFVNVSGRYDLKGG---IED-----RLGK 201 (318)
Q Consensus 141 d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~---~~~-----~~~~ 201 (318)
|+.+++.|+.++ +.++|+++|+|.||++++.++.... ...+.++++|..+.... ... .+..
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~ 211 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDA 211 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCH
Confidence 999999999866 3789999999999999998887643 37899999998776541 000 0011
Q ss_pred HHHHHHhccCCcc-ccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhh----CC
Q 021050 202 DYMEKIMQDGFID-VKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKI----IP 276 (318)
Q Consensus 202 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~----~~ 276 (318)
..........+.. ........ ........ ... -.|+++++|+.|.+.+ +.+.+.++ -.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~------------~spl~~~~--~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv 274 (312)
T COG0657 212 AAILAWFADLYLGAAPDREDPE------------ASPLASDD--LSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGV 274 (312)
T ss_pred HHHHHHHHHHhCcCccccCCCc------------cCcccccc--ccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCC
Confidence 1111010001110 00000000 00000000 012 4689999999999987 44444443 34
Q ss_pred CCEEEEECCCCccCC--CC--hHHHHHHHHHHHH
Q 021050 277 NHKLHVVEGANHGYT--NH--QAELVSVVLDFVK 306 (318)
Q Consensus 277 ~~~~~~~~~~gH~~~--~~--~~~~~~~i~~fl~ 306 (318)
.++++.+++..|.+. .. ..+....+.+|+.
T Consensus 275 ~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 275 PVELRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred eEEEEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 578999999999873 32 1233456666665
No 105
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.59 E-value=1.2e-14 Score=117.62 Aligned_cols=130 Identities=17% Similarity=0.119 Sum_probs=84.4
Q ss_pred ceeEEEEeCCCCcEEEEEEec-C---CCCeEEEEEccCCCCCCC----------------hhHHHHHHHHHHcCceEEEE
Q 021050 59 KQQELVIPNKYGERLVGVLHD-A---ESSEIVVLCHGFRSTKDD----------------PSMVNLAVALQNEGISAFRF 118 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~-~---~~~~~vv~~hG~~~~~~~----------------~~~~~~~~~l~~~G~~v~~~ 118 (318)
..|.+.|.+.++..+.+++.. . ++.|+||++||-++..+. ..-..++..|+++||.|+++
T Consensus 87 ~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~ 166 (390)
T PF12715_consen 87 TREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAP 166 (390)
T ss_dssp EEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE
T ss_pred EEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEE
Confidence 678889988899898887553 3 367899999998765421 01134678999999999999
Q ss_pred cCCCCCCCCCCccC-----CChhhh---------------HHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhh
Q 021050 119 DFAGNGESEGSFQY-----GNYWRE---------------ADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 119 d~~g~G~s~~~~~~-----~~~~~~---------------~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
|.+|+|+....... .++... +-|...+++||.++ +.++|.++|+||||..++.+|+.
T Consensus 167 D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL 246 (390)
T PF12715_consen 167 DALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL 246 (390)
T ss_dssp --TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred ccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc
Confidence 99999987653311 111111 24556689999887 67899999999999999999999
Q ss_pred cCCccEEEEeccC
Q 021050 176 YNDIRTFVNVSGR 188 (318)
Q Consensus 176 ~p~v~~~v~~~~~ 188 (318)
.++|++.|..+-.
T Consensus 247 DdRIka~v~~~~l 259 (390)
T PF12715_consen 247 DDRIKATVANGYL 259 (390)
T ss_dssp -TT--EEEEES-B
T ss_pred chhhHhHhhhhhh
Confidence 9999888866543
No 106
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.58 E-value=1.5e-14 Score=116.44 Aligned_cols=111 Identities=14% Similarity=0.213 Sum_probs=82.4
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHH-HHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC---CCCc
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVAL-QNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAV 156 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~ 156 (318)
.++|++|++||++++........+.+.+ ...+++|+++|+++++.+.......+.....+++..+++.+.+. +.++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 4578999999999887332344555544 44579999999998743321111223445567888888888664 4578
Q ss_pred EEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccc
Q 021050 157 GAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL 191 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 191 (318)
++++||||||++|..++.+.|+ |.++++++|....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 9999999999999999999987 9999999886543
No 107
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.58 E-value=5.5e-14 Score=120.27 Aligned_cols=106 Identities=8% Similarity=0.033 Sum_probs=86.8
Q ss_pred CCeEEEEEccCCCCCCChhH-----HHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSM-----VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRA 155 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~ 155 (318)
-+++||+++.+-... +.+ +.++++|.++|+.|+++|+++-+.... ..+++++++.+.++++.++.. +.+
T Consensus 214 ~~~PLLIVPp~INK~--YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQINKF--YIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhhhhh--heeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 357899999988554 333 689999999999999999998766543 346677788899999998877 678
Q ss_pred cEEEEEEechHHHHHH----HHhhcCC--ccEEEEeccCcccc
Q 021050 156 VGAILGHSKGGSVVLL----YASKYND--IRTFVNVSGRYDLK 192 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~----~a~~~p~--v~~~v~~~~~~~~~ 192 (318)
++.++|+|+||.++.. +++++++ |++++++.++.+..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 8999999999999987 7777774 99999998887765
No 108
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.57 E-value=2.8e-14 Score=112.81 Aligned_cols=211 Identities=13% Similarity=0.166 Sum_probs=124.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
++|+|+|+.+++. ..|..+++.|...++.|+.++++|.+ .......++.+++++..+.|..... ..++.|+|||
T Consensus 1 ~~lf~~p~~gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~--~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSA--SSYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQP--EGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSG--GGGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTS--SSSEEEEEET
T ss_pred CeEEEEcCCccCH--HHHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCC--CCCeeehccC
Confidence 4799999999988 67999999997645899999999998 2233446788888888777766532 2389999999
Q ss_pred chHHHHHHHHhhcC----CccEEEEeccCccccc--hhhhhhhHH-HHHHHhccCCccccCCCCcceeeechHHHHHhhc
Q 021050 164 KGGSVVLLYASKYN----DIRTFVNVSGRYDLKG--GIEDRLGKD-YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLN 236 (318)
Q Consensus 164 ~Gg~~a~~~a~~~p----~v~~~v~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (318)
+||.+|+.+|.+.. ++..+++++++..... ......... ....+.............. .....+.+.+.
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 150 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDE----ELLARLLRALR 150 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHH----HHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCH----HHHHHHHHHHH
Confidence 99999999998762 2889999996544321 111111111 1111111110000000000 00011111111
Q ss_pred cChHHHhh--hccC---CCcEEEEEcCCCCccCcc---hhHHHHhhCCC-CEEEEECCCCccCC-C-ChHHHHHHHHHHH
Q 021050 237 TNMHDACL--QIDM---ECSVLTIHGSSDKIIPLQ---DAHEFDKIIPN-HKLHVVEGANHGYT-N-HQAELVSVVLDFV 305 (318)
Q Consensus 237 ~~~~~~~~--~~~~---~~P~lii~g~~D~~~~~~---~~~~~~~~~~~-~~~~~~~~~gH~~~-~-~~~~~~~~i~~fl 305 (318)
........ .... .+|..+.....|+..... ....+.+...+ .+++.++| +|+.+ . +.+++.+.|.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 151 DDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 11000000 0011 456888888888887655 23335555554 57888885 99964 3 4567777777765
No 109
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.57 E-value=3.2e-13 Score=112.09 Aligned_cols=133 Identities=19% Similarity=0.206 Sum_probs=105.6
Q ss_pred ceeEEEEeCCCCcEEEEEEec--CCCCeEEEEEccCCCCCCChhH----HHHHHHHHHcCceEEEEcCCCCCCCCCCc--
Q 021050 59 KQQELVIPNKYGERLVGVLHD--AESSEIVVLCHGFRSTKDDPSM----VNLAVALQNEGISAFRFDFAGNGESEGSF-- 130 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~--~~~~~~vv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-- 130 (318)
+.|+..+.+.||..+.....+ .+++|+|++.||+.+++..|.. ..++=.|+++||.|..-+.||.-.|.+..
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l 126 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL 126 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc
Confidence 568999999999977765554 2688999999999988865333 34677789999999999999976665321
Q ss_pred --------cCCChhhh-HHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC----ccEEEEeccCccc
Q 021050 131 --------QYGNYWRE-ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYDL 191 (318)
Q Consensus 131 --------~~~~~~~~-~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~~ 191 (318)
-..++.++ ..|+-+.|+++... +.++++.+|||.|+.....++...|+ |+..++++|....
T Consensus 127 ~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 127 SPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred CCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 12234443 46999999998877 67899999999999999999999876 9999999997643
No 110
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=1.5e-13 Score=124.23 Aligned_cols=229 Identities=18% Similarity=0.218 Sum_probs=148.7
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC------CCeEEEEEccCCCCCC--ChhHHHHHH-HHHHcCceEEEEcCCCCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTKD--DPSMVNLAV-ALQNEGISAFRFDFAGNGESEGS 129 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~------~~~~vv~~hG~~~~~~--~~~~~~~~~-~l~~~G~~v~~~d~~g~G~s~~~ 129 (318)
..+++.+ +|....+.+..|+ +-|.+|.+||++++.. +..-..+.. .+...|+.|+.+|.||-|.....
T Consensus 499 ~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 499 EFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred eeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchh
Confidence 3344444 7888877766442 5689999999997331 111223333 35677999999999998766543
Q ss_pred ccCC---Ch-hhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC--ccEEEEeccCccccchhhhhhh
Q 021050 130 FQYG---NY-WREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYDLKGGIEDRLG 200 (318)
Q Consensus 130 ~~~~---~~-~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~ 200 (318)
.... .+ ...++|...+++++.+. +..++.++|+|.||++++.++...|+ +++.+.++|..+.. .......
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~t 654 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYT 654 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccccc
Confidence 2111 11 12367777777777766 67899999999999999999999985 77779999987765 2221111
Q ss_pred HHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCc-EEEEEcCCCCccCcchhHHHHhhCC---
Q 021050 201 KDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECS-VLTIHGSSDKIIPLQDAHEFDKIIP--- 276 (318)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~lii~g~~D~~~~~~~~~~~~~~~~--- 276 (318)
.++ .......... ..+. ....... .++.| .|++||+.|..|+.+++..+.+.+.
T Consensus 655 ery---------mg~p~~~~~~--------y~e~---~~~~~~~--~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~g 712 (755)
T KOG2100|consen 655 ERY---------MGLPSENDKG--------YEES---SVSSPAN--NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAG 712 (755)
T ss_pred Hhh---------cCCCccccch--------hhhc---cccchhh--hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCC
Confidence 111 0000000000 0000 0000011 22334 5999999999999999988887663
Q ss_pred -CCEEEEECCCCccCCCCh--HHHHHHHHHHHHhhcCCCC
Q 021050 277 -NHKLHVVEGANHGYTNHQ--AELVSVVLDFVKASLKQDH 313 (318)
Q Consensus 277 -~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl~~~~~~~~ 313 (318)
..++.++|+.+|.+.... ..+...+..|+..++....
T Consensus 713 v~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~ 752 (755)
T KOG2100|consen 713 VPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPV 752 (755)
T ss_pred CceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCccc
Confidence 278999999999986544 7889999999997776543
No 111
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.55 E-value=4.2e-13 Score=98.32 Aligned_cols=179 Identities=17% Similarity=0.187 Sum_probs=123.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGH 162 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~ 162 (318)
..+|++-|-|+-. ..-..+++.|+++|+.|+.+|-+-|--+. .+..+.+.|+..++++..++ +.++++|+|+
T Consensus 3 t~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 4678888877766 45788999999999999999977543333 34567799999999988877 7889999999
Q ss_pred echHHHHHHHHhhcCC-----ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhcc
Q 021050 163 SKGGSVVLLYASKYND-----IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNT 237 (318)
Q Consensus 163 S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
|+|+-+.-....+.|. |+.++++++..... +.+....+...-..
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~d-------------------------------Feihv~~wlg~~~~ 124 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTTAD-------------------------------FEIHVSGWLGMGGD 124 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCcce-------------------------------EEEEhhhhcCCCCC
Confidence 9999998888888774 89999998753221 11111111111000
Q ss_pred ----ChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHHHh
Q 021050 238 ----NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKA 307 (318)
Q Consensus 238 ----~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 307 (318)
+......... ..|++.|+|++|.-.... .+ ..++.+.+.+|| ||.|-.+.+.+.+.|.+-|++
T Consensus 125 ~~~~~~~pei~~l~-~~~v~CiyG~~E~d~~cp---~l--~~~~~~~i~lpG-gHHfd~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 125 DAAYPVIPEIAKLP-PAPVQCIYGEDEDDSLCP---SL--RQPGVEVIALPG-GHHFDGDYDALAKRILDALKA 191 (192)
T ss_pred cccCCchHHHHhCC-CCeEEEEEcCCCCCCcCc---cc--cCCCcEEEEcCC-CcCCCCCHHHHHHHHHHHHhc
Confidence 0111111111 459999999987652211 12 125789999996 788778888899888887764
No 112
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.54 E-value=3.1e-14 Score=110.11 Aligned_cols=171 Identities=21% Similarity=0.239 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHH-HHHHHhccCCcc
Q 021050 139 ADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKD-YMEKIMQDGFID 214 (318)
Q Consensus 139 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 214 (318)
.+.+..+++||+++ +.++|.|+|.|.||-+|+.+|+.+|+|+++|.++|............... ....+.......
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF 82 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc
Confidence 35678899999988 44689999999999999999999999999999998765433221111000 000000000000
Q ss_pred ccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchh-HHHHhhC-----C-CCEEEEECCCC
Q 021050 215 VKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDA-HEFDKII-----P-NHKLHVVEGAN 287 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~-~~~~~~~-----~-~~~~~~~~~~g 287 (318)
..................+....... ..-.++++|+|+|.|++|...|.... +.+.+++ + +.+++.|+++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~--IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aG 160 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEAR--IPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAG 160 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB----GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-
T ss_pred eecCCcceehhhhhhccccccccccc--ccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCC
Confidence 00000000000000000000111111 11125799999999999999886443 3333332 2 36889999999
Q ss_pred ccCCC------C-----------------------hHHHHHHHHHHHHhhcCC
Q 021050 288 HGYTN------H-----------------------QAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 288 H~~~~------~-----------------------~~~~~~~i~~fl~~~~~~ 311 (318)
|.+.. . .++.++.+.+||++++++
T Consensus 161 H~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 161 HLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred ceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99520 0 246799999999998863
No 113
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.54 E-value=2.6e-13 Score=106.52 Aligned_cols=204 Identities=22% Similarity=0.358 Sum_probs=124.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHH-HcCce----EEEEcCCCC----CCCCC----C-------ccC-CChhhhHH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQ-NEGIS----AFRFDFAGN----GESEG----S-------FQY-GNYWREAD 140 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~-~~G~~----v~~~d~~g~----G~s~~----~-------~~~-~~~~~~~~ 140 (318)
...|.||+||++++..+ +..++..+. ++|.. ++.++--|. |.-.. + ... .++...+.
T Consensus 10 ~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 45689999999999965 899999997 65542 344444442 22111 1 111 35677899
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhc------CCccEEEEeccCccccchhhhhhhHHHHHHHhccCCc
Q 021050 141 DLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY------NDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFI 213 (318)
Q Consensus 141 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (318)
.+..++.+|.++ +.+++-+|||||||..++.++..+ |.+..+|.++++++.......... ..
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~-----------~~ 156 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN-----------QN 156 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT-----------TT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch-----------hh
Confidence 999999999998 889999999999999999998874 458999999998876432211000 00
Q ss_pred cccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcC------CCCccCcchhHHHHhhCCC----CEEEEE
Q 021050 214 DVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGS------SDKIIPLQDAHEFDKIIPN----HKLHVV 283 (318)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~ 283 (318)
. ....+ .......+...+.. . ....+-.+.+|-|.|. .|..||...+..+...+.+ .+-.++
T Consensus 157 ~-~~~~g---p~~~~~~y~~l~~~-~---~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v 228 (255)
T PF06028_consen 157 D-LNKNG---PKSMTPMYQDLLKN-R---RKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTV 228 (255)
T ss_dssp --CSTT----BSS--HHHHHHHHT-H---GGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEE
T ss_pred h-hcccC---CcccCHHHHHHHHH-H---HhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEE
Confidence 0 00000 00011111111110 0 0112336789999998 7999999998888777754 345556
Q ss_pred CC--CCccCCCChHHHHHHHHHHHH
Q 021050 284 EG--ANHGYTNHQAELVSVVLDFVK 306 (318)
Q Consensus 284 ~~--~gH~~~~~~~~~~~~i~~fl~ 306 (318)
.| +.|.-+.+.+++.+.|.+||-
T Consensus 229 ~G~~a~HS~LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 229 TGKDAQHSQLHENPQVDKLIIQFLW 253 (255)
T ss_dssp ESGGGSCCGGGCCHHHHHHHHHHHC
T ss_pred ECCCCccccCCCCHHHHHHHHHHhc
Confidence 55 689976667799999999984
No 114
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.53 E-value=4.4e-12 Score=98.52 Aligned_cols=101 Identities=19% Similarity=0.240 Sum_probs=79.6
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-------
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA------- 152 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------- 152 (318)
.+.-|++||+||+.... ..|..+.+.++++||.|+.+|+...+.. .-....+++.++++|+.+.
T Consensus 14 ~g~yPVv~f~~G~~~~~--s~Ys~ll~hvAShGyIVV~~d~~~~~~~-------~~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLIN--SWYSQLLEHVASHGYIVVAPDLYSIGGP-------DDTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCCcCEEEEeCCcCCCH--HHHHHHHHHHHhCceEEEEecccccCCC-------CcchhHHHHHHHHHHHHhcchhhccc
Confidence 45789999999999655 5699999999999999999997653321 1123366777777776653
Q ss_pred ----CCCcEEEEEEechHHHHHHHHhhc-----CC-ccEEEEeccCc
Q 021050 153 ----NRAVGAILGHSKGGSVVLLYASKY-----ND-IRTFVNVSGRY 189 (318)
Q Consensus 153 ----~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~ 189 (318)
+..++.|.|||.||-+|..++..+ +. ++++++++|..
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 456899999999999999988887 23 99999999865
No 115
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.52 E-value=4.9e-13 Score=104.65 Aligned_cols=235 Identities=14% Similarity=0.216 Sum_probs=128.5
Q ss_pred EEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCCCChhHH-----HHHHHHHHcCceEEEEcCCCCCCCCCCc----cC
Q 021050 64 VIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMV-----NLAVALQNEGISAFRFDFAGNGESEGSF----QY 132 (318)
Q Consensus 64 ~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~g~G~s~~~~----~~ 132 (318)
.++++-| .+.+...+.. ++|++|-.|..|.+..+ .|. .-++.+.++ +.++=+|.||+....... ..
T Consensus 3 ~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~s-cF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKS-CFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHH-HCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT---
T ss_pred eeccCce-EEEEEEEecCCCCCceEEEeccccccchH-HHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccc
Confidence 3455555 6777777765 49999999999987742 122 234555555 999999999996544322 24
Q ss_pred CChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHH-HHHhcc
Q 021050 133 GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYM-EKIMQD 210 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 210 (318)
.+.++.++++..+++++ +.+.++-+|-..||++..++|..+|+ |.|+|++++....... .+.....+. ..+...
T Consensus 80 Psmd~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw-~Ew~~~K~~~~~L~~~ 155 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW-MEWFYQKLSSWLLYSY 155 (283)
T ss_dssp --HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H-HHHHHHHHH-------
T ss_pred cCHHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH-HHHHHHHHhccccccc
Confidence 57889999999999999 78889999999999999999999999 9999999986543322 111111111 011111
Q ss_pred CCcccc-------------C-CCCc--------ceeeechHH---HHHhhccChHHHhhhccCCCcEEEEEcCCCCccCc
Q 021050 211 GFIDVK-------------N-KTGD--------VEYRVTEES---LMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL 265 (318)
Q Consensus 211 ~~~~~~-------------~-~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~ 265 (318)
+..... . .... ......+.. +.+.+..............||+|++.|++.+..
T Consensus 156 gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~-- 233 (283)
T PF03096_consen 156 GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV-- 233 (283)
T ss_dssp CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--
T ss_pred ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--
Confidence 111100 0 0000 000000011 111110000000111234799999999998774
Q ss_pred chhHHHHhhCC--CCEEEEECCCCccCC-CChHHHHHHHHHHHHh
Q 021050 266 QDAHEFDKIIP--NHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 307 (318)
Q Consensus 266 ~~~~~~~~~~~--~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 307 (318)
+.+.++..++. +.++..++++|=..+ +.|.++++.+.=||+.
T Consensus 234 ~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 234 DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 56677777763 468888999977765 7788999999999875
No 116
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=2.9e-12 Score=108.68 Aligned_cols=228 Identities=14% Similarity=0.133 Sum_probs=139.9
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC------CCeEEEEEccCCCCC---CChhH--HHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTK---DDPSM--VNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~------~~~~vv~~hG~~~~~---~~~~~--~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
..+-+.+.+..|.++.+.++.|. +.|+|+++-|+++-. +++.+ ..-...|++.||.|+.+|-||.-...
T Consensus 612 p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRG 691 (867)
T KOG2281|consen 612 PPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRG 691 (867)
T ss_pred ChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccc
Confidence 44668888888999999888652 579999999988543 11111 12235678899999999999864443
Q ss_pred CCcc-----CCChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhh
Q 021050 128 GSFQ-----YGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED 197 (318)
Q Consensus 128 ~~~~-----~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~ 197 (318)
.... ..+ .-.++|=.+.+++|.++ +.++|++-|||+||+++++...++|+ ++.+|.-+| .........
T Consensus 692 lkFE~~ik~kmG-qVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap-VT~W~~YDT 769 (867)
T KOG2281|consen 692 LKFESHIKKKMG-QVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP-VTDWRLYDT 769 (867)
T ss_pred hhhHHHHhhccC-eeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCc-ceeeeeecc
Confidence 2211 000 11134444555555554 67899999999999999999999999 555554444 322222111
Q ss_pred hhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC--
Q 021050 198 RLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII-- 275 (318)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-- 275 (318)
.... .+...+..+.......+.....+.+. .-...+|++||--|+.|...+...+...+
T Consensus 770 gYTE---------RYMg~P~~nE~gY~agSV~~~Veklp----------depnRLlLvHGliDENVHF~Hts~Lvs~lvk 830 (867)
T KOG2281|consen 770 GYTE---------RYMGYPDNNEHGYGAGSVAGHVEKLP----------DEPNRLLLVHGLIDENVHFAHTSRLVSALVK 830 (867)
T ss_pred cchh---------hhcCCCccchhcccchhHHHHHhhCC----------CCCceEEEEecccccchhhhhHHHHHHHHHh
Confidence 1111 11111111111111111111111111 11346899999999999988776665544
Q ss_pred --CCCEEEEECCCCccCC--CChHHHHHHHHHHHHh
Q 021050 276 --PNHKLHVVEGANHGYT--NHQAELVSVVLDFVKA 307 (318)
Q Consensus 276 --~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 307 (318)
+..++.+||+..|..- +...-+-..+..|+++
T Consensus 831 agKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 831 AGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 4469999999999973 4445667788888875
No 117
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.49 E-value=2.2e-13 Score=86.88 Aligned_cols=76 Identities=30% Similarity=0.498 Sum_probs=64.2
Q ss_pred CcEEEEEEecCC--CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCCChhhhHHHHHHHH
Q 021050 70 GERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLRAVV 146 (318)
Q Consensus 70 g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~~~~~~~~d~~~~i 146 (318)
|.+|.+..+.+. .+.+|+++||++.+. ..+..+++.|+++||.|+++|+||||.|.+.. ...++++.++|+..++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~--~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHS--GRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHH--HHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 567887777654 378999999999998 56999999999999999999999999999755 3467888899988776
Q ss_pred H
Q 021050 147 Q 147 (318)
Q Consensus 147 ~ 147 (318)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 3
No 118
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.48 E-value=2e-11 Score=94.44 Aligned_cols=239 Identities=13% Similarity=0.149 Sum_probs=150.4
Q ss_pred eeEEEEeCCCCcEEEEEEecCC--CCeEEEEEccCCCCCCChhHH-----HHHHHHHHcCceEEEEcCCCCCCCCCC---
Q 021050 60 QQELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMV-----NLAVALQNEGISAFRFDFAGNGESEGS--- 129 (318)
Q Consensus 60 ~~~v~~~~~~g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~g~G~s~~~--- 129 (318)
.++..+.+.-| .++...++.. ++|++|-.|..|.+..+ .|. +-+..+.++ +.++-+|.||+-.....
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~s-cFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKS-CFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHh-HhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC
Confidence 36667777666 5565566543 58999999999988854 233 334556666 99999999998544322
Q ss_pred -ccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHH--
Q 021050 130 -FQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYME-- 205 (318)
Q Consensus 130 -~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~-- 205 (318)
....+.++.++++..+++++ +.+.++-+|.-.|+++..++|..+|+ |-|+|++++..... ++.+.....+..
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~-gwiew~~~K~~s~~ 174 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAK-GWIEWAYNKVSSNL 174 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCc-hHHHHHHHHHHHHH
Confidence 23457889999999999999 78889999999999999999999999 99999998754432 222211111111
Q ss_pred ------------HHhccCCccccCCCC---------cceeeechH---HHHHhhccChHHHhhh----ccCCCcEEEEEc
Q 021050 206 ------------KIMQDGFIDVKNKTG---------DVEYRVTEE---SLMDRLNTNMHDACLQ----IDMECSVLTIHG 257 (318)
Q Consensus 206 ------------~~~~~~~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~P~lii~g 257 (318)
.+....+........ .......+. .+.+.+.......... ..++||+|++.|
T Consensus 175 l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvG 254 (326)
T KOG2931|consen 175 LYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVG 254 (326)
T ss_pred HHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEec
Confidence 111111111000000 000001111 1111111100000000 134699999999
Q ss_pred CCCCccCcchhHHHHhhCC--CCEEEEECCCCccCCC-ChHHHHHHHHHHHHh
Q 021050 258 SSDKIIPLQDAHEFDKIIP--NHKLHVVEGANHGYTN-HQAELVSVVLDFVKA 307 (318)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~ 307 (318)
++.+.+ +.+.++...+. +.++..+.++|-...+ .|..+.+.+.=|++.
T Consensus 255 d~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 255 DNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred CCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 998775 45556665553 4678888899988875 788899999999874
No 119
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.47 E-value=3.8e-12 Score=94.55 Aligned_cols=182 Identities=19% Similarity=0.247 Sum_probs=117.8
Q ss_pred CCeEEEEEccCCCCCCC--hhHHHHHHHHHHcCceEEEEcCCC------CCCCCC------Cc---------------cC
Q 021050 82 SSEIVVLCHGFRSTKDD--PSMVNLAVALQNEGISAFRFDFAG------NGESEG------SF---------------QY 132 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g------~G~s~~------~~---------------~~ 132 (318)
.++-|+|+||+-.+... .-...+.+.|.+. +..+.+|-|- .-.+.+ +. ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 45779999999988842 1122455666665 7777777762 111110 00 00
Q ss_pred CChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhh---------cCCccEEEEeccCccccchhhhhhhHHH
Q 021050 133 GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASK---------YNDIRTFVNVSGRYDLKGGIEDRLGKDY 203 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~---------~p~v~~~v~~~~~~~~~~~~~~~~~~~~ 203 (318)
..+...-+-+..+.+++.++++= =.|+|+|.|+.++..++.. .|.++-+|++++..........
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPF-DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~------ 155 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPF-DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDE------ 155 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCC-ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhh------
Confidence 01111123455666666665421 2799999999999998882 2347888999886543211110
Q ss_pred HHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEE
Q 021050 204 MEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVV 283 (318)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 283 (318)
......+++|.|-|.|+.|.+++...++.|++.+++..+..-
T Consensus 156 --------------------------------------~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~H 197 (230)
T KOG2551|consen 156 --------------------------------------SAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEH 197 (230)
T ss_pred --------------------------------------hhhccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEec
Confidence 011115699999999999999999999999999999977666
Q ss_pred CCCCccCCCChHHHHHHHHHHHHhhcCC
Q 021050 284 EGANHGYTNHQAELVSVVLDFVKASLKQ 311 (318)
Q Consensus 284 ~~~gH~~~~~~~~~~~~i~~fl~~~~~~ 311 (318)
+ +||.+... ..+.+.|.+||...+..
T Consensus 198 p-ggH~VP~~-~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 198 P-GGHIVPNK-AKYKEKIADFIQSFLQE 223 (230)
T ss_pred C-CCccCCCc-hHHHHHHHHHHHHHHHh
Confidence 6 59997433 36777788888766544
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.47 E-value=9.8e-13 Score=96.01 Aligned_cols=199 Identities=13% Similarity=0.145 Sum_probs=128.6
Q ss_pred eeEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhh
Q 021050 60 QQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWRE 138 (318)
Q Consensus 60 ~~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~ 138 (318)
.+.+.+-. +|.++.-.+.+....+.+||+||+-..... ......+..+.++||+|..++|- .+.. ...+.+.
T Consensus 45 ~e~l~Yg~-~g~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q---~htL~qt 117 (270)
T KOG4627|consen 45 VEHLRYGE-GGRQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQ---VHTLEQT 117 (270)
T ss_pred hhccccCC-CCceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcc---cccHHHH
Confidence 35555543 333333223335578999999997643321 34456677778889999999764 3322 2356666
Q ss_pred HHHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhc--CCccEEEEeccCccccchhhhhhhHHHHHHHhccCCcc
Q 021050 139 ADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKY--NDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFID 214 (318)
Q Consensus 139 ~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (318)
..++...++++.+. ..+.+.+-|||.|+++|+.+..+. |.|.|+++.++.+++.+..... ...
T Consensus 118 ~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te-------------~g~ 184 (270)
T KOG4627|consen 118 MTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTE-------------SGN 184 (270)
T ss_pred HHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCc-------------ccc
Confidence 77888888887665 445677889999999999988775 4599999999877654322111 111
Q ss_pred ccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC
Q 021050 215 VKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY 290 (318)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 290 (318)
... ++.+.. .......... ..++.|+|++.|.+|..--.++.+.+.+....+.+..+++.+|+-
T Consensus 185 dlg--------Lt~~~a--e~~Scdl~~~--~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 185 DLG--------LTERNA--ESVSCDLWEY--TDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYD 248 (270)
T ss_pred ccC--------cccchh--hhcCccHHHh--cCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhh
Confidence 000 000000 0000001111 145889999999999877788889999998889999999999993
No 121
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.46 E-value=8.1e-12 Score=89.49 Aligned_cols=172 Identities=12% Similarity=0.074 Sum_probs=110.8
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 162 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 162 (318)
.+.+|++||+.++... .|.. .+.++--.+-.++.. .+....++++++.+.+.+..+ .++++||+|
T Consensus 2 ~~~~lIVpG~~~Sg~~-HWq~---~we~~l~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~----~~~~vlVAH 66 (181)
T COG3545 2 MTDVLIVPGYGGSGPN-HWQS---RWESALPNARRVEQD-------DWEAPVLDDWIARLEKEVNAA----EGPVVLVAH 66 (181)
T ss_pred CceEEEecCCCCCChh-HHHH---HHHhhCccchhcccC-------CCCCCCHHHHHHHHHHHHhcc----CCCeEEEEe
Confidence 3568999999998853 3332 222221223444443 223335566666666666544 345999999
Q ss_pred echHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHH
Q 021050 163 SKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHD 241 (318)
Q Consensus 163 S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
|+|+..++.++.+... |.|+++++|+............ ..+....
T Consensus 67 SLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~---------~tf~~~p------------------------- 112 (181)
T COG3545 67 SLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL---------MTFDPIP------------------------- 112 (181)
T ss_pred cccHHHHHHHHHhhhhccceEEEecCCCccccccchhhc---------cccCCCc-------------------------
Confidence 9999999999988765 9999999987543321110000 0000000
Q ss_pred HhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCC----CChHHHHHHHHHHHHh
Q 021050 242 ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT----NHQAELVSVVLDFVKA 307 (318)
Q Consensus 242 ~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~~~~i~~fl~~ 307 (318)
..+..-|.+++.+.+|++++++.++.+++.+. ..++....+||... ..=++....+.+|+.+
T Consensus 113 ---~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 113 ---REPLPFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ---cccCCCceeEEEecCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 00335689999999999999999999999884 67777778899943 3345666677776654
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.46 E-value=9.6e-13 Score=100.94 Aligned_cols=169 Identities=16% Similarity=0.179 Sum_probs=98.6
Q ss_pred CCeEEEEEccCCCCCCChhHHH---HHHHHHHcCceEEEEcCCCCCCCCCCcc-----CCChhhhHHHHHHHHHHHHhC-
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVN---LAVALQNEGISAFRFDFAGNGESEGSFQ-----YGNYWREADDLRAVVQYFCGA- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~d~~~~i~~l~~~- 152 (318)
+.|.||++||.+++.+. +.. +.+.-.++||.|+.++.........-.. ...-......+.++++++..+
T Consensus 15 ~~PLVv~LHG~~~~a~~--~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAED--FAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCEEEEeCCCCCCHHH--HHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 46899999999998843 222 2333344589999888542211111100 000012355677788887766
Q ss_pred --CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechH
Q 021050 153 --NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEE 229 (318)
Q Consensus 153 --~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (318)
+..||++.|+|.||+++..++..+|+ +.++...++.......- ... ....+. ..... .+.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~--~~~--a~~~m~-~g~~~------------~p~ 155 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAAS--GAS--ALSAMR-SGPRP------------APA 155 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccC--ccc--HHHHhh-CCCCC------------ChH
Confidence 77899999999999999999999999 88887777654321110 000 000000 00000 000
Q ss_pred HHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC
Q 021050 230 SLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII 275 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~ 275 (318)
........ ... ....|++++||+.|..|.+...+++.+.+
T Consensus 156 ~~~~a~~~-----~g~-~~~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 156 AAWGARSD-----AGA-YPGYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred HHHHhhhh-----ccC-CCCCCEEEEecCCCCccCcchHHHHHHHH
Confidence 00000000 000 11459999999999999999888877665
No 123
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.45 E-value=1.2e-11 Score=98.95 Aligned_cols=105 Identities=11% Similarity=0.121 Sum_probs=86.7
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHc---CceEEEEcCCCCCCCCCC------ccCCChhhhHHHHHHHHHHHHhC-
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNE---GISAFRFDFAGNGESEGS------FQYGNYWREADDLRAVVQYFCGA- 152 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~---G~~v~~~d~~g~G~s~~~------~~~~~~~~~~~d~~~~i~~l~~~- 152 (318)
+..+|+++|.+|-. .+|..+.+.|.++ .+.|+++.+.||-.+... ....++.++++...++++.+...
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 57899999999999 6799998888754 699999999999776654 23457777777777777777664
Q ss_pred --CCCcEEEEEEechHHHHHHHHhhcC----CccEEEEeccCc
Q 021050 153 --NRAVGAILGHSKGGSVVLLYASKYN----DIRTFVNVSGRY 189 (318)
Q Consensus 153 --~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~v~~~~~~ 189 (318)
...+++++|||.|++++++++.+.+ +|.+++++-|..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 4568999999999999999999999 299999998864
No 124
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.45 E-value=1.1e-11 Score=94.30 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=82.5
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-------
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA------- 152 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------- 152 (318)
+|.-|+|+|+||+.-.. .+|..+...++++||-|+++++-.- .. .+-.+.+++..++++|+.+.
T Consensus 43 ~G~yPVilF~HG~~l~n--s~Ys~lL~HIASHGfIVVAPQl~~~--~~-----p~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYN--SFYSQLLAHIASHGFIVVAPQLYTL--FP-----PDGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CCCccEEEEeechhhhh--HHHHHHHHHHhhcCeEEEechhhcc--cC-----CCchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 46789999999999887 6899999999999999999998642 11 12244577888888888754
Q ss_pred ----CCCcEEEEEEechHHHHHHHHhhcC-C--ccEEEEeccCcc
Q 021050 153 ----NRAVGAILGHSKGGSVVLLYASKYN-D--IRTFVNVSGRYD 190 (318)
Q Consensus 153 ----~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~~v~~~~~~~ 190 (318)
+..+++++|||.||-.|..+|..+. + +.++|.++|...
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 4568999999999999999998874 3 888998888544
No 125
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.44 E-value=1e-12 Score=117.34 Aligned_cols=112 Identities=18% Similarity=0.249 Sum_probs=86.1
Q ss_pred EEEEeCCCCcEEEEEEecC---------CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC---
Q 021050 62 ELVIPNKYGERLVGVLHDA---------ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS--- 129 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~---------~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~--- 129 (318)
.+.+..++|.++.+..... +..|+||++||++++. ..|..+++.|.++||+|+++|+||||.|...
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~--~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAK--ENALAFAGTLAAAGVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCH--HHHHHHHHHHHhCCcEEEEeCCCCCCcccccccc
Confidence 3455556776666544322 2346999999999999 5589999999999999999999999999432
Q ss_pred -------cc-------------CCChhhhHHHHHHHHHHHH------h-------CCCCcEEEEEEechHHHHHHHHhh
Q 021050 130 -------FQ-------------YGNYWREADDLRAVVQYFC------G-------ANRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 130 -------~~-------------~~~~~~~~~d~~~~i~~l~------~-------~~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
.. ..++.+.+.|+..+...+. . .+..+++++||||||.++..++..
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1256788899999998887 1 134689999999999999998875
No 126
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.44 E-value=6e-12 Score=105.41 Aligned_cols=179 Identities=14% Similarity=0.179 Sum_probs=101.2
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC------CCC---cc-------------CCC----
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES------EGS---FQ-------------YGN---- 134 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s------~~~---~~-------------~~~---- 134 (318)
++-|+|||-||++++.. .+..++..|+++||-|+++|.|..-.. +.. .. ...
T Consensus 98 ~~~PvvIFSHGlgg~R~--~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT--SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TT--TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchh--hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 67899999999999994 599999999999999999999953211 000 00 000
Q ss_pred ---------hhhhHHHHHHHHHHHHhC-----------------------CCCcEEEEEEechHHHHHHHHhhcCCccEE
Q 021050 135 ---------YWREADDLRAVVQYFCGA-----------------------NRAVGAILGHSKGGSVVLLYASKYNDIRTF 182 (318)
Q Consensus 135 ---------~~~~~~d~~~~i~~l~~~-----------------------~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~ 182 (318)
+...+.++..+++.+... +.++++++|||+||+.++.++.+..++++.
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~ 255 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAG 255 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceE
Confidence 011145666777666531 245799999999999999999888889999
Q ss_pred EEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCc
Q 021050 183 VNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKI 262 (318)
Q Consensus 183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~ 262 (318)
|+++++......- . ...++.|+|+|.++. +
T Consensus 256 I~LD~W~~Pl~~~----------------------------------~--------------~~~i~~P~L~InSe~--f 285 (379)
T PF03403_consen 256 ILLDPWMFPLGDE----------------------------------I--------------YSKIPQPLLFINSES--F 285 (379)
T ss_dssp EEES---TTS-GG----------------------------------G--------------GGG--S-EEEEEETT--T
T ss_pred EEeCCcccCCCcc----------------------------------c--------------ccCCCCCEEEEECcc--c
Confidence 9999864321000 0 014578999998875 2
Q ss_pred cCcchhHHHHh---hCCCCEEEEECCCCccCCCC--------------------h----HHHHHHHHHHHHhhcCC
Q 021050 263 IPLQDAHEFDK---IIPNHKLHVVEGANHGYTNH--------------------Q----AELVSVVLDFVKASLKQ 311 (318)
Q Consensus 263 ~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~--------------------~----~~~~~~i~~fl~~~~~~ 311 (318)
........+.+ .-++..+..+.|+.|.-+.+ + +...+.+.+||+++++-
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 286 QWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp --HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred CChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 22333333333 22456788999999983211 1 23467788999998763
No 127
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.38 E-value=4.7e-12 Score=98.19 Aligned_cols=165 Identities=15% Similarity=0.222 Sum_probs=83.5
Q ss_pred CCeEEEEEccCCCCCCChhHHH----HHHHHHHcCceEEEEcCCCCC-----CCC------------CCc-cCC------
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVN----LAVALQNEGISAFRFDFAGNG-----ESE------------GSF-QYG------ 133 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~----~~~~l~~~G~~v~~~d~~g~G-----~s~------------~~~-~~~------ 133 (318)
+++-|+|+||++.++ ..++. +.+.|.+.++..+.+|-|--- ... .+. ...
T Consensus 3 ~k~riLcLHG~~~na--~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA--EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--H--HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCH--HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 467899999999999 45654 445555436888888866311 110 000 000
Q ss_pred -ChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc---------CCccEEEEeccCccccchhhhhhhHHH
Q 021050 134 -NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY---------NDIRTFVNVSGRYDLKGGIEDRLGKDY 203 (318)
Q Consensus 134 -~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~---------p~v~~~v~~~~~~~~~~~~~~~~~~~~ 203 (318)
.+....+.+..+.+++.+.++ =..|+|+|.||.+|..++... |.++.+|++++...........
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~----- 154 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQEL----- 154 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTT-----
T ss_pred ccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhh-----
Confidence 011122233333333333332 258999999999999888642 2389999998865432221000
Q ss_pred HHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC-CEEEE
Q 021050 204 MEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKLHV 282 (318)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~ 282 (318)
+ ...+|++|+|.|+|.+|.+++++.++.+.+.+.+ .+++.
T Consensus 155 -------------------------------~--------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~ 195 (212)
T PF03959_consen 155 -------------------------------Y--------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIE 195 (212)
T ss_dssp -------------------------------T----------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEE
T ss_pred -------------------------------h--------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEE
Confidence 0 1115689999999999999999999999998877 77777
Q ss_pred ECCCCccCCCCh
Q 021050 283 VEGANHGYTNHQ 294 (318)
Q Consensus 283 ~~~~gH~~~~~~ 294 (318)
.++ ||.+....
T Consensus 196 h~g-GH~vP~~~ 206 (212)
T PF03959_consen 196 HDG-GHHVPRKK 206 (212)
T ss_dssp ESS-SSS----H
T ss_pred ECC-CCcCcCCh
Confidence 875 88864333
No 128
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.36 E-value=8.2e-12 Score=98.47 Aligned_cols=127 Identities=23% Similarity=0.223 Sum_probs=93.4
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC------CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~------~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 132 (318)
.-++..+.+.||.+|...+.... ....|||+-|..+-.+- .++..=.+.||.|+.++.||++.|.+.+..
T Consensus 213 NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv----G~m~tP~~lgYsvLGwNhPGFagSTG~P~p 288 (517)
T KOG1553|consen 213 NGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV----GVMNTPAQLGYSVLGWNHPGFAGSTGLPYP 288 (517)
T ss_pred CCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe----eeecChHHhCceeeccCCCCccccCCCCCc
Confidence 44788899999999988776421 35688999888776532 222222456899999999999999987643
Q ss_pred CChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCcccc
Q 021050 133 GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLK 192 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~ 192 (318)
.+- ...+.+++++..+. ..+.|++.|||.||..+.++|..+|+|+++|+-+.+.++.
T Consensus 289 ~n~---~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDll 348 (517)
T KOG1553|consen 289 VNT---LNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLL 348 (517)
T ss_pred ccc---hHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhh
Confidence 322 33344455554443 5578999999999999999999999999999887765543
No 129
>PRK04940 hypothetical protein; Provisional
Probab=99.36 E-value=1.7e-10 Score=84.67 Aligned_cols=173 Identities=13% Similarity=0.132 Sum_probs=100.0
Q ss_pred EEEEccCCCCCCC--hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCC-CCcEEEEEE
Q 021050 86 VVLCHGFRSTKDD--PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGAN-RAVGAILGH 162 (318)
Q Consensus 86 vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~i~l~G~ 162 (318)
|+++||+.++..+ .....+. .+ .-+++++ +++ ........+.+.+.+..+...+ .+++.|+|.
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-~~-~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-FI-DPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-ee-CCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7999999999865 1122222 22 1123332 222 0112222333444444322211 256999999
Q ss_pred echHHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHH
Q 021050 163 SKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDA 242 (318)
Q Consensus 163 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (318)
|+||+.|..+|.++. + ..|+++|...+...+....+.. .. ...++...+.+. .
T Consensus 68 SLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~-----------------~~-y~~~~~~h~~eL-~------ 120 (180)
T PRK04940 68 GLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRP-----------------EE-YADIATKCVTNF-R------ 120 (180)
T ss_pred ChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCC-----------------cc-hhhhhHHHHHHh-h------
Confidence 999999999999886 3 5677899887755443332210 00 001111111111 1
Q ss_pred hhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCC-EEEEECCCCccCCCChHHHHHHHHHHHH
Q 021050 243 CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH-KLHVVEGANHGYTNHQAELVSVVLDFVK 306 (318)
Q Consensus 243 ~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 306 (318)
.+..-..+++..+.|++.+...+.+.+ .++ ++.+.+|++|.| .+-++....|.+|+.
T Consensus 121 ---~~~p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f-~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 121 ---EKNRDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF-KNISPHLQRIKAFKT 178 (180)
T ss_pred ---hcCcccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC-CCHHHHHHHHHHHHh
Confidence 111335699999999999876665543 445 788999988986 344678889999985
No 130
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.35 E-value=3.3e-11 Score=103.05 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=103.8
Q ss_pred ceeEEEEeCCCCcEEEEEEecC---CCCeEEEEEccCCCCCC---ChhHHHHHH---HHHHcCceEEEEcCCCCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDA---ESSEIVVLCHGFRSTKD---DPSMVNLAV---ALQNEGISAFRFDFAGNGESEGS 129 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~---~~~~~vv~~hG~~~~~~---~~~~~~~~~---~l~~~G~~v~~~d~~g~G~s~~~ 129 (318)
...++.++..||++|...++.+ ++.|+++..+-++-... ......... .++.+||.|+..|.||.|.|++.
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 3467899999999999987754 47788888882222221 011223334 67889999999999999999998
Q ss_pred ccCCChhhhHHHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcccc
Q 021050 130 FQYGNYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 192 (318)
Q Consensus 130 ~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 192 (318)
.....- +.++|-.+.|+|+.++ ...+|..+|.|++|...+.+|+..|- +++++...+..+..
T Consensus 98 ~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 98 FDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred cceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 764433 5799999999999988 45689999999999999999988766 99999888877644
No 131
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.35 E-value=1.3e-11 Score=104.49 Aligned_cols=236 Identities=15% Similarity=0.077 Sum_probs=159.3
Q ss_pred ceeEEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC--
Q 021050 59 KQQELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY-- 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~-- 132 (318)
..++...++.||++|++++... .++|++|+--|+..-+....|......+.++|...+..+.||=|+-......
T Consensus 393 ~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa 472 (648)
T COG1505 393 EVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAG 472 (648)
T ss_pred eEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHH
Confidence 6678888899999999987742 2578888877776665555566666888899999999999998876643321
Q ss_pred --CChhhhHHHHHHHHHHHHhCC---CCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHH
Q 021050 133 --GNYWREADDLRAVVQYFCGAN---RAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEK 206 (318)
Q Consensus 133 --~~~~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 206 (318)
.+-....+|..++.+.|..++ ++++.+.|-|-||.+...+..++|+ +.++|+-.|..++.+.-.-..+..++..
T Consensus 473 ~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~E 552 (648)
T COG1505 473 MKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAE 552 (648)
T ss_pred hhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhh
Confidence 122344789999999999884 4689999999999999999999999 7777777776665443222223333222
Q ss_pred HhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC--CEEE--E
Q 021050 207 IMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN--HKLH--V 282 (318)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~--~ 282 (318)
.-. .-.++...-.....+.........-.|+||-.+.+|..|.|.++.+++..+.. ..+. +
T Consensus 553 YG~---------------Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e 617 (648)
T COG1505 553 YGN---------------PDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLRE 617 (648)
T ss_pred cCC---------------CCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEe
Confidence 211 11222222222333333333333467999999999999999999998877643 3333 3
Q ss_pred ECCCCccCCCChH---HHHHHHHHHHHhhc
Q 021050 283 VEGANHGYTNHQA---ELVSVVLDFVKASL 309 (318)
Q Consensus 283 ~~~~gH~~~~~~~---~~~~~i~~fl~~~~ 309 (318)
=.++||.--.... .-...+..||.+.|
T Consensus 618 ~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 618 ETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred ecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 3458999643332 33455677877765
No 132
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.33 E-value=8.2e-11 Score=91.10 Aligned_cols=154 Identities=18% Similarity=0.194 Sum_probs=96.4
Q ss_pred CCCcEEEEEEecCC------CC-eEEEEEccCCCCCCChhHHHHH-------HHHHHcCceEEEEcCCC-CCCCCCCccC
Q 021050 68 KYGERLVGVLHDAE------SS-EIVVLCHGFRSTKDDPSMVNLA-------VALQNEGISAFRFDFAG-NGESEGSFQY 132 (318)
Q Consensus 68 ~~g~~l~~~~~~~~------~~-~~vv~~hG~~~~~~~~~~~~~~-------~~l~~~G~~v~~~d~~g-~G~s~~~~~~ 132 (318)
..|.+|.+.++-|. +. |.|||+||.|..+.. ....+. ....+.+|-|+++.|-- +-.++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~d-n~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSD-NDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCch-hhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 46889999887552 34 999999999987743 111111 11111233444444321 111111
Q ss_pred CChhhhHHHHHHHHH-HHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHH
Q 021050 133 GNYWREADDLRAVVQ-YFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKI 207 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~-~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 207 (318)
..........++++ .+.+. +..||.++|.|+||+.++.++.++|+ +.+.+++++.-+-....
T Consensus 244 -~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv------------ 310 (387)
T COG4099 244 -KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLV------------ 310 (387)
T ss_pred -ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhh------------
Confidence 11222333333443 44343 66799999999999999999999999 99999998854421000
Q ss_pred hccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC
Q 021050 208 MQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP 276 (318)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~ 276 (318)
.. --+.|+.++|+.+|+++|.+.+.-+.+.+.
T Consensus 311 -------------------------~~------------lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 311 -------------------------RT------------LKKAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred -------------------------hh------------hccCceEEEEecCCCccccCcceeehHHHH
Confidence 00 117799999999999999998876665553
No 133
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.32 E-value=3.1e-11 Score=89.22 Aligned_cols=175 Identities=15% Similarity=0.227 Sum_probs=117.1
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC------------------CCccCCChhhhHHHHHH
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE------------------GSFQYGNYWREADDLRA 144 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~------------------~~~~~~~~~~~~~d~~~ 144 (318)
..+||++||.+.+..+ |..+.+.|.-.....+.+..|-.-.+. ......++...++.+..
T Consensus 3 ~atIi~LHglGDsg~~--~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG--WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecCCCCCcc--HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 4589999999999954 777777776666777777554211110 01122234444666667
Q ss_pred HHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccc-hhhhhhhHHHHHHHhccCCccccCCCC
Q 021050 145 VVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-GIEDRLGKDYMEKIMQDGFIDVKNKTG 220 (318)
Q Consensus 145 ~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (318)
+++...+. +.++|.+-|+|+||++++..+..+|. +.+++..++...... ..... ..
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~-----------------~~--- 140 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGW-----------------LP--- 140 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCC-----------------cc---
Confidence 77666555 45789999999999999999999977 888887777543211 10000 00
Q ss_pred cceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC----CCCEEEEECCCCccCCCChHH
Q 021050 221 DVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII----PNHKLHVVEGANHGYTNHQAE 296 (318)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~ 296 (318)
. .+ ..|++..||+.|++||....+...+.+ ..++++.|+|.+|... .+
T Consensus 141 -----------------~-------~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~---~~ 192 (206)
T KOG2112|consen 141 -----------------G-------VN-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS---PQ 192 (206)
T ss_pred -----------------c-------cC-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc---HH
Confidence 0 01 468999999999999987766555433 3478999999999964 34
Q ss_pred HHHHHHHHHHh
Q 021050 297 LVSVVLDFVKA 307 (318)
Q Consensus 297 ~~~~i~~fl~~ 307 (318)
-.+.+..|+..
T Consensus 193 e~~~~~~~~~~ 203 (206)
T KOG2112|consen 193 ELDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHHHH
Confidence 45667777765
No 134
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.28 E-value=6.3e-10 Score=88.60 Aligned_cols=114 Identities=19% Similarity=0.246 Sum_probs=89.2
Q ss_pred ceeEEEEeCCCCcEEEEEEec---CCCCeEEEEEccCCCCCCChhH-----HHHHHHHHHcCceEEEEcCCCCCCCCCCc
Q 021050 59 KQQELVIPNKYGERLVGVLHD---AESSEIVVLCHGFRSTKDDPSM-----VNLAVALQNEGISAFRFDFAGNGESEGSF 130 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~---~~~~~~vv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~g~G~s~~~~ 130 (318)
...++.+.. |+..+.+.... ..+...||++-|.++..+.... ..+.+.....|.+|+.++|||.|.|.+..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~ 189 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP 189 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC
Confidence 557888886 89999886653 3467899999999987754111 23444445568999999999999999876
Q ss_pred cCCChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhhc
Q 021050 131 QYGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 131 ~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
. ..+++.|..+.++||+.+ +.++|++.|||+||.++..++.++
T Consensus 190 s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 S---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred C---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 4 578899999999999864 347899999999999999866664
No 135
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.27 E-value=4.1e-10 Score=91.36 Aligned_cols=205 Identities=17% Similarity=0.178 Sum_probs=109.6
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC----C---CCcEEEEEEechHHHHHHHHhh
Q 021050 103 NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA----N---RAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 103 ~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----~---~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
.+...+.++||.|+++||.|.|. +. ..-......+.+.++..++. + ..++.++|||.||.-++.+|..
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~---~y--~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT---PY--LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC---cc--cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 45566668899999999999987 11 11133344555555554432 1 3589999999999998776644
Q ss_pred c----CC----ccEEEEeccCccccchhhhh------------------------------hhH---HHHHHHhccCCcc
Q 021050 176 Y----ND----IRTFVNVSGRYDLKGGIEDR------------------------------LGK---DYMEKIMQDGFID 214 (318)
Q Consensus 176 ~----p~----v~~~v~~~~~~~~~~~~~~~------------------------------~~~---~~~~~~~~~~~~~ 214 (318)
. |+ +.+.+..+++.++...+... +.. .............
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 3 44 45666666655433211100 000 0000000000000
Q ss_pred cc----CCC---Cccee-e-----echHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhC-----C
Q 021050 215 VK----NKT---GDVEY-R-----VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII-----P 276 (318)
Q Consensus 215 ~~----~~~---~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-----~ 276 (318)
.. ... ..... . .....+...+.............+.|+++.+|..|.++|+...+.+.+.+ .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a 251 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA 251 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC
Confidence 00 000 00000 0 00111111111111100011234789999999999999998887766543 3
Q ss_pred CCEEEEECCCCccCCCChHHHHHHHHHHHHhhcCCCCC
Q 021050 277 NHKLHVVEGANHGYTNHQAELVSVVLDFVKASLKQDHP 314 (318)
Q Consensus 277 ~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~~~~ 314 (318)
+++++.+++.+|.... -.-.....+||.+.+.....
T Consensus 252 ~V~~~~~~~~~H~~~~--~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 252 DVEYVRYPGGGHLGAA--FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CEEEEecCCCChhhhh--hcCcHHHHHHHHHHHCCCCC
Confidence 5778888999998521 11235667999998876654
No 136
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.27 E-value=5.8e-11 Score=95.79 Aligned_cols=95 Identities=25% Similarity=0.343 Sum_probs=74.7
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC--CCCCCCcc------CCChhhhHHHHHHHHHHHHhC-
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN--GESEGSFQ------YGNYWREADDLRAVVQYFCGA- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~--G~s~~~~~------~~~~~~~~~d~~~~i~~l~~~- 152 (318)
.-|+||+-||.|+...+ +..+++.+++.||.|.+++.+|- |....... ..-+.+...|+..++++|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~--f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGSGSYVTG--FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCCCCCccc--hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 67999999999999855 89999999999999999999984 44332211 112345578888888888765
Q ss_pred ---------CCCcEEEEEEechHHHHHHHHhhcCC
Q 021050 153 ---------NRAVGAILGHSKGGSVVLLYASKYND 178 (318)
Q Consensus 153 ---------~~~~i~l~G~S~Gg~~a~~~a~~~p~ 178 (318)
+..+|.++|||+||+.++.++.-..+
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 35689999999999999998876544
No 137
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.27 E-value=4.9e-11 Score=97.25 Aligned_cols=107 Identities=11% Similarity=0.140 Sum_probs=83.4
Q ss_pred CeEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhH-HHHHHHHHHHHhC-CCCcE
Q 021050 83 SEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA-DDLRAVVQYFCGA-NRAVG 157 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~-~d~~~~i~~l~~~-~~~~i 157 (318)
.++++++|.+-....- ..-..++..|.+.|..|+.+++++-..+.+. .++++++ +++..+++.+++. +.++|
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~---~~~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA---KNLEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh---ccHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 5678889987655411 1235789999999999999999976666552 3566666 7888888888777 55789
Q ss_pred EEEEEechHHHHHHHHhhcCC--ccEEEEeccCcccc
Q 021050 158 AILGHSKGGSVVLLYASKYND--IRTFVNVSGRYDLK 192 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~ 192 (318)
.++|+|.||.++..+++.++. |+.++++..+.+..
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999998888875 89998888776654
No 138
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.25 E-value=1.4e-10 Score=114.09 Aligned_cols=217 Identities=9% Similarity=0.046 Sum_probs=126.5
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
+.+++++++||++++. +.|..+++.|.. ++.|+.++.+|+|.+. ....++..+++++.+.++.+. ...+++++
T Consensus 1066 ~~~~~l~~lh~~~g~~--~~~~~l~~~l~~-~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~--~~~p~~l~ 1138 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFA--WQFSVLSRYLDP-QWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ--PHGPYHLL 1138 (1296)
T ss_pred CCCCCeEEecCCCCch--HHHHHHHHhcCC-CCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC--CCCCEEEE
Confidence 4457899999999998 679999999865 4999999999998653 233577888888888887652 23479999
Q ss_pred EEechHHHHHHHHhhc---CC-ccEEEEeccCccccchhhhh----hhHHHHHHHhc--cCCccccCCCCcceeeechHH
Q 021050 161 GHSKGGSVVLLYASKY---ND-IRTFVNVSGRYDLKGGIEDR----LGKDYMEKIMQ--DGFIDVKNKTGDVEYRVTEES 230 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (318)
|||+||.+|..+|.+. ++ +..++++++........... ........... ........ ... .......
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~ 1215 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQ--GSL-STELFTT 1215 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhh--ccc-cHHHHHH
Confidence 9999999999999864 44 88888887643211000000 00000000000 00000000 000 0000011
Q ss_pred HHHhhccCh--HHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHHHhh
Q 021050 231 LMDRLNTNM--HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 231 ~~~~~~~~~--~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 308 (318)
+...+.... ........+.+|++++.+..|..........+.+...+.++..++ ++|..+..++. ...+.++|.+.
T Consensus 1216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~v~-g~H~~~~~~~~-~~~~~~~l~~~ 1293 (1296)
T PRK10252 1216 IEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWIAELDVYRQD-CAHVDIISPEA-FEKIGPILRAT 1293 (1296)
T ss_pred HHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhcCCCEEEECC-CCHHHHCCcHH-HHHHHHHHHHH
Confidence 111111100 000111245789999999998766555555565555667888886 58997554443 35555566554
Q ss_pred c
Q 021050 309 L 309 (318)
Q Consensus 309 ~ 309 (318)
+
T Consensus 1294 l 1294 (1296)
T PRK10252 1294 L 1294 (1296)
T ss_pred h
Confidence 4
No 139
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.3e-10 Score=98.95 Aligned_cols=238 Identities=17% Similarity=0.147 Sum_probs=147.7
Q ss_pred ceeEEEEeCCCCcEEEEEEec------CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC
Q 021050 59 KQQELVIPNKYGERLVGVLHD------AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 132 (318)
..+.+.+++.||+.+.-.+.- .++.|.+|+.+|.-+-.-...|..--..|.++|+.....|.||-|+-......
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 557889999999988765442 35789998888876555334455444455668999999999998776543321
Q ss_pred CC----hhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHH
Q 021050 133 GN----YWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYM 204 (318)
Q Consensus 133 ~~----~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~ 204 (318)
.+ =....+|+.+.+++|..+ ...++.+.|.|.||.++..++..+|+ +.++|+-.|..++...+.......+.
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~ 599 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTT 599 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccch
Confidence 11 123378999999999988 45789999999999999999999999 88888888877765444333222222
Q ss_pred HHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhc--c-CCCcEEEEEcCCCCccCcchhHHHHhhCC-----
Q 021050 205 EKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQI--D-MECSVLTIHGSSDKIIPLQDAHEFDKIIP----- 276 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~P~lii~g~~D~~~~~~~~~~~~~~~~----- 276 (318)
..+-..+.. +.+............... + .-.-+|+..+.+|..|.+..+.++.+.+.
T Consensus 600 sd~ee~g~p---------------~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~ 664 (712)
T KOG2237|consen 600 SDYEEWGNP---------------EDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCD 664 (712)
T ss_pred hhhcccCCh---------------hhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhc
Confidence 222111111 111111111100000000 1 13358888999988777766555444331
Q ss_pred ------CCEEEEECCCCccCCCChH---HHHHHHHHHHHhhcCC
Q 021050 277 ------NHKLHVVEGANHGYTNHQA---ELVSVVLDFVKASLKQ 311 (318)
Q Consensus 277 ------~~~~~~~~~~gH~~~~~~~---~~~~~i~~fl~~~~~~ 311 (318)
..-+.+-.++||+.-.... +-.....+||.+.+..
T Consensus 665 ~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 665 SLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred chhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 2446777899999632221 2234456777776653
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.21 E-value=2.1e-09 Score=83.78 Aligned_cols=126 Identities=20% Similarity=0.188 Sum_probs=84.6
Q ss_pred eEEEEeCCCCcEEEEEEecCC----CCeEEEEEccCCCCCCChhHHH---HHHHHHHcCceEEEEc-CCCC------CCC
Q 021050 61 QELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVN---LAVALQNEGISAFRFD-FAGN------GES 126 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d-~~g~------G~s 126 (318)
+..++.. +|....++++.|. +.|.||++||.+++... +.. +-+...+.||-|+.+| ++++ +.+
T Consensus 36 ~~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag--~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 36 SVASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG--QLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred Ccccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChHH--hhcccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 3344443 5777777777542 45899999999988732 332 2333345699999884 2222 222
Q ss_pred CCCccCCChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCc
Q 021050 127 EGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 189 (318)
Q Consensus 127 ~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 189 (318)
..+.....-.+.+..+.++++.+..+ +..+|++.|.|-||.++..++..+|+ +.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 12221111234477788888888777 66799999999999999999999999 77777776654
No 141
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.19 E-value=1.1e-09 Score=83.07 Aligned_cols=203 Identities=16% Similarity=0.243 Sum_probs=126.1
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcC-----ceEEEEcCCCC----CCCCCC-----------ccCCChhhhHHHH
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEG-----ISAFRFDFAGN----GESEGS-----------FQYGNYWREADDL 142 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~~g~----G~s~~~-----------~~~~~~~~~~~d~ 142 (318)
.-+.||+||.+++..+ ...++..|...+ --++.+|--|- |.-+.. ....+..++...+
T Consensus 45 ~iPTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 45 AIPTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred ccceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 3478999999999954 889999987763 13566666662 211111 1123456778899
Q ss_pred HHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhc------CCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccc
Q 021050 143 RAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY------NDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDV 215 (318)
Q Consensus 143 ~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
..++.+|.++ +..++.++||||||.-...++..+ |.+..+|.++++++........ ...+.
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de------------~v~~v 190 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDE------------TVTDV 190 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCc------------chhee
Confidence 9999999988 788999999999999999988876 5599999999988721111000 00000
Q ss_pred cCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCC------CccCcchhHHHHhhCCC---C-EEEEEC-
Q 021050 216 KNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSD------KIIPLQDAHEFDKIIPN---H-KLHVVE- 284 (318)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D------~~~~~~~~~~~~~~~~~---~-~~~~~~- 284 (318)
...... .......+.+. ...........+|+|.|+-| ..||...+...+..+++ . .-.+++
T Consensus 191 ~~~~~~----~~~t~y~~y~~----~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~G 262 (288)
T COG4814 191 LKDGPG----LIKTPYYDYIA----KNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKG 262 (288)
T ss_pred eccCcc----ccCcHHHHHHH----hcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeC
Confidence 000000 00000111110 00111133668999999864 56777777666665543 1 222444
Q ss_pred -CCCccCCCChHHHHHHHHHHHHh
Q 021050 285 -GANHGYTNHQAELVSVVLDFVKA 307 (318)
Q Consensus 285 -~~gH~~~~~~~~~~~~i~~fl~~ 307 (318)
++.|.-+.+.+.+.+.+..||-+
T Consensus 263 k~a~Hs~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 263 KDARHSKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred CcchhhccCCChhHHHHHHHHhhc
Confidence 47899776777889999999864
No 142
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.17 E-value=8.9e-10 Score=85.86 Aligned_cols=107 Identities=23% Similarity=0.234 Sum_probs=72.2
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHH--------cCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQN--------EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~- 152 (318)
.+.+|||+||.+++.. .++.++..+.+ ..++++++|+......-. ...+.+..+.+.+.++.+.+.
T Consensus 3 ~g~pVlFIhG~~Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhh
Confidence 4678999999998874 46666655522 147899999876422211 122334455555555555332
Q ss_pred -----CCCcEEEEEEechHHHHHHHHhhcC---C-ccEEEEeccCccccc
Q 021050 153 -----NRAVGAILGHSKGGSVVLLYASKYN---D-IRTFVNVSGRYDLKG 193 (318)
Q Consensus 153 -----~~~~i~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~ 193 (318)
+.++++++||||||.+|-.++...+ + |+.+|.++.|.....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 5678999999999999988776653 3 999999988765443
No 143
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.17 E-value=4.1e-09 Score=90.76 Aligned_cols=222 Identities=14% Similarity=0.073 Sum_probs=142.3
Q ss_pred ceeEEEEeCCCCcEEEEEEe------cCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC
Q 021050 59 KQQELVIPNKYGERLVGVLH------DAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 132 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~------~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~ 132 (318)
..+.+-++..||+.+...+. .++++|++++.-|.-+......+....-.|..+|+.-...-.||=|+-......
T Consensus 418 ~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe 497 (682)
T COG1770 418 VSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYE 497 (682)
T ss_pred EEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHH
Confidence 66888888889999887654 245789999988877666555566666677889998888888987766533211
Q ss_pred C----ChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHH
Q 021050 133 G----NYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYM 204 (318)
Q Consensus 133 ~----~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~ 204 (318)
. .=.....|+.++.++|.+. ..++++++|-|.||++.-..+...|+ ++++|+-.|+.+....+...-
T Consensus 498 ~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~s----- 572 (682)
T COG1770 498 DGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPS----- 572 (682)
T ss_pred hhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCC-----
Confidence 1 1122267889999999887 45689999999999999999999999 999999999887654432211
Q ss_pred HHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CC-E
Q 021050 205 EKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NH-K 279 (318)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~-~ 279 (318)
..-.............++...-.....+...... +-..|+|++.|-+|+.|..-...++.+++. +. .
T Consensus 573 -------lPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a-~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~p 644 (682)
T COG1770 573 -------LPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEA-QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNP 644 (682)
T ss_pred -------CCCCccchhhhCCcCCHHHHHHHhhcCchhcccc-CCCCceEEEccccCCccccchHHHHHHHHhhcccCCCc
Confidence 0000000111111222222222222333333333 336689999999999998655555544443 22 1
Q ss_pred --EEEECCCCccCCCC
Q 021050 280 --LHVVEGANHGYTNH 293 (318)
Q Consensus 280 --~~~~~~~gH~~~~~ 293 (318)
+..=-++||.-...
T Consensus 645 lLlkt~M~aGHgG~Sg 660 (682)
T COG1770 645 LLLKTNMDAGHGGASG 660 (682)
T ss_pred EEEEecccccCCCCCC
Confidence 22223589986533
No 144
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.16 E-value=1.2e-09 Score=85.32 Aligned_cols=108 Identities=15% Similarity=0.241 Sum_probs=77.9
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC------C---Cc---------------c-----
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE------G---SF---------------Q----- 131 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~------~---~~---------------~----- 131 (318)
++-|+|||-||+|++. ..|..++-.|+++||.|.+++.|.+..+. . +. .
T Consensus 116 ~k~PvvvFSHGLggsR--t~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSR--TLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCccEEEEecccccch--hhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 3679999999999999 67999999999999999999999765432 0 00 0
Q ss_pred CCChhhhHHHHHHHHHHHHhC------------------------CCCcEEEEEEechHHHHHHHHhhcCCccEEEEecc
Q 021050 132 YGNYWREADDLRAVVQYFCGA------------------------NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSG 187 (318)
Q Consensus 132 ~~~~~~~~~d~~~~i~~l~~~------------------------~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 187 (318)
.......+.++..++.-+.+. +-.++.++|||.||+.++...+.+.++++.|++++
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~ 273 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDA 273 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeee
Confidence 000112244555555444431 23468999999999999998888778999998887
Q ss_pred Ccc
Q 021050 188 RYD 190 (318)
Q Consensus 188 ~~~ 190 (318)
+..
T Consensus 274 WM~ 276 (399)
T KOG3847|consen 274 WMF 276 (399)
T ss_pred eec
Confidence 543
No 145
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.11 E-value=5e-08 Score=74.02 Aligned_cols=223 Identities=15% Similarity=0.157 Sum_probs=125.3
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHc-C--ceEEEEcCCCCCCCC---CCc---cCCChhhhHHHHHHHHHHHHh
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-G--ISAFRFDFAGNGESE---GSF---QYGNYWREADDLRAVVQYFCG 151 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G--~~v~~~d~~g~G~s~---~~~---~~~~~~~~~~d~~~~i~~l~~ 151 (318)
..++.+++++|.+|.. .+|..+++.|... + ..++.+..-||-.-+ ... .........+.+..-++++++
T Consensus 27 ~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 4788999999999999 7799999888654 2 447777777775433 111 111222334555555555555
Q ss_pred C--CCCcEEEEEEechHHHHHHHHhhc-CC--ccEEEEeccCccc----cch-------------------hhhhhhHHH
Q 021050 152 A--NRAVGAILGHSKGGSVVLLYASKY-ND--IRTFVNVSGRYDL----KGG-------------------IEDRLGKDY 203 (318)
Q Consensus 152 ~--~~~~i~l~G~S~Gg~~a~~~a~~~-p~--v~~~v~~~~~~~~----~~~-------------------~~~~~~~~~ 203 (318)
. ...+++++|||.|+++.+.+.... ++ |..++++-|...- +.+ ..-.+...+
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 4 446899999999999999988744 33 7788877663210 000 000011112
Q ss_pred HHHHhccCCccccCCCCc---ceeeec-hHHHHHh--hccChHHHhhh------ccCCCcEEEEEcCCCCccCcchhHHH
Q 021050 204 MEKIMQDGFIDVKNKTGD---VEYRVT-EESLMDR--LNTNMHDACLQ------IDMECSVLTIHGSSDKIIPLQDAHEF 271 (318)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~--~~~~~~~~~~~------~~~~~P~lii~g~~D~~~~~~~~~~~ 271 (318)
.+.+.............. ....+. +..+.+. +..+....... ....+-+-+.+|.+|.+||.+..+.+
T Consensus 185 ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~ 264 (301)
T KOG3975|consen 185 IRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYY 264 (301)
T ss_pred HHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHH
Confidence 222211111110000000 000011 1111110 01111111100 02256789999999999999999999
Q ss_pred HhhCCCCEEEEE-CCCCccCC-CChHHHHHHHHHHH
Q 021050 272 DKIIPNHKLHVV-EGANHGYT-NHQAELVSVVLDFV 305 (318)
Q Consensus 272 ~~~~~~~~~~~~-~~~gH~~~-~~~~~~~~~i~~fl 305 (318)
.+.+|..++..- ++..|.|. .+.+..+..+.+.+
T Consensus 265 kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 265 KDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred hhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 999987544432 66899974 66677777777765
No 146
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.08 E-value=3.3e-08 Score=85.48 Aligned_cols=127 Identities=18% Similarity=0.134 Sum_probs=85.4
Q ss_pred eEEEEeC-CCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHH------------------HHHHHcCceEEE
Q 021050 61 QELVIPN-KYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLA------------------VALQNEGISAFR 117 (318)
Q Consensus 61 ~~v~~~~-~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~------------------~~l~~~G~~v~~ 117 (318)
-.+.+.. ..+..+.++++++ .+.|+|++++|+++.+. ..-.+. -.+.+. ..++.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss--~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~ 126 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS--MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIY 126 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH--HHhhhccCCCeEEeCCCCceeECCcccccc-cCeEE
Confidence 3455542 2366788887763 36799999999988772 221111 012233 57889
Q ss_pred EcCC-CCCCCCCCcc--CCChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhhc---------CC--c
Q 021050 118 FDFA-GNGESEGSFQ--YGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKY---------ND--I 179 (318)
Q Consensus 118 ~d~~-g~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~---------p~--v 179 (318)
+|.| |+|.|..... ..+..+.++|+..+++.+.++ ...+++|+|+|+||.++..+|.+. .. +
T Consensus 127 iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 127 VDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred EeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 9975 8888865432 234466788999888866543 346899999999999988777653 12 7
Q ss_pred cEEEEeccCcc
Q 021050 180 RTFVNVSGRYD 190 (318)
Q Consensus 180 ~~~v~~~~~~~ 190 (318)
+|+++.+|..+
T Consensus 207 kGi~IGNg~~d 217 (462)
T PTZ00472 207 AGLAVGNGLTD 217 (462)
T ss_pred EEEEEeccccC
Confidence 89988888654
No 147
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.07 E-value=1.3e-07 Score=77.30 Aligned_cols=203 Identities=15% Similarity=0.183 Sum_probs=131.1
Q ss_pred eEEEEeCCCCcEEEEEEecCC---CCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCC--CCCCC-------
Q 021050 61 QELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAG--NGESE------- 127 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~---~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g--~G~s~------- 127 (318)
+-+.+.. ++.+.-+.+.+.. ...+||++||.+.+.+. .....+.+.|.++||+++++..|. .....
T Consensus 63 e~~~L~~-~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~ 141 (310)
T PF12048_consen 63 EVQWLQA-GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAE 141 (310)
T ss_pred hcEEeec-CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCC
Confidence 3344443 5556666555432 45699999999999863 456778888999999999999887 11110
Q ss_pred -----C--CccC-----------------CChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC--ccE
Q 021050 128 -----G--SFQY-----------------GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND--IRT 181 (318)
Q Consensus 128 -----~--~~~~-----------------~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~ 181 (318)
+ .... ..-.....-+.+++.++.+++..+++|+||+.|+.++..+.+..+. +++
T Consensus 142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~da 221 (310)
T PF12048_consen 142 EVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDA 221 (310)
T ss_pred CCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCe
Confidence 0 0000 0012335667788888887777779999999999999999999876 899
Q ss_pred EEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhhccCCCcEEEEEcCCCC
Q 021050 182 FVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDK 261 (318)
Q Consensus 182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~ 261 (318)
+|++++.......- .. +.+.+ ..++.|+|=|++.+..
T Consensus 222 LV~I~a~~p~~~~n-----~~----------------------------l~~~l----------a~l~iPvLDi~~~~~~ 258 (310)
T PF12048_consen 222 LVLINAYWPQPDRN-----PA----------------------------LAEQL----------AQLKIPVLDIYSADNP 258 (310)
T ss_pred EEEEeCCCCcchhh-----hh----------------------------HHHHh----------hccCCCEEEEecCCCh
Confidence 99999865432210 00 00000 0448899999987733
Q ss_pred ccCcchh---HHHHhhC--CCCEEEEECCCCccCCCChHHHHHHHHHHHHhh
Q 021050 262 IIPLQDA---HEFDKII--PNHKLHVVEGANHGYTNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 262 ~~~~~~~---~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 308 (318)
.+ ...+ +.+.++. ++.+-..+.+..|......+.+.+.|..||+++
T Consensus 259 ~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 259 AS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HH-HHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 32 2211 1222222 245666677777766555556999999999864
No 148
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.06 E-value=3.9e-09 Score=86.57 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=74.8
Q ss_pred CCeEEEEEccCCCCCCC-----hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHH-hCCCC
Q 021050 82 SSEIVVLCHGFRSTKDD-----PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC-GANRA 155 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~-~~~~~ 155 (318)
+.|+||++||+|-.-.. .....+...|. ...++++||.-.... .....+..+..++.+..++|. ..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~---~~~~~yPtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD---EHGHKYPTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc---cCCCcCchHHHHHHHHHHHHHhccCCC
Confidence 46999999999855432 11223333443 368999999744211 112345666888888999988 55888
Q ss_pred cEEEEEEechHHHHHHHHhhcC------CccEEEEeccCcccc
Q 021050 156 VGAILGHSKGGSVVLLYASKYN------DIRTFVNVSGRYDLK 192 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~~a~~~p------~v~~~v~~~~~~~~~ 192 (318)
+|+|+|-|.||.+++.++.... -.+++|++||+..+.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999999987765431 178999999988765
No 149
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.05 E-value=4.4e-09 Score=80.27 Aligned_cols=230 Identities=11% Similarity=0.118 Sum_probs=127.4
Q ss_pred EecCCCCeEEEEEccCCCCCCChhHH-HHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhH-----------HHHHH
Q 021050 77 LHDAESSEIVVLCHGFRSTKDDPSMV-NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA-----------DDLRA 144 (318)
Q Consensus 77 ~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~-----------~d~~~ 144 (318)
+.+....+.-+.+.|-|.+.. .-+ .+...+.++|...++++-|-||....+......-..+ ++...
T Consensus 107 liPQK~~~KOG~~a~tgdh~y--~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~ 184 (371)
T KOG1551|consen 107 LIPQKMADLCLSWALTGDHVY--TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVK 184 (371)
T ss_pred ecccCcCCeeEEEeecCCcee--EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334445566667767666652 222 4667777888999999999999887544322211122 22223
Q ss_pred HHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhH--HHHHHHhcc-CCccccCCCC
Q 021050 145 VVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGK--DYMEKIMQD-GFIDVKNKTG 220 (318)
Q Consensus 145 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~ 220 (318)
++.|-...+..++.++|.||||.+|......++. |.-+-++++...........+.. ..++++... .+.....+..
T Consensus 185 lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p 264 (371)
T KOG1551|consen 185 LFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNP 264 (371)
T ss_pred hcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCc
Confidence 3333222267899999999999999999998877 55544444322111111111111 111111111 0111111111
Q ss_pred cceeee--------chHHHHHhhcc--ChHHHhhhc--cCC-CcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCC
Q 021050 221 DVEYRV--------TEESLMDRLNT--NMHDACLQI--DME-CSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGAN 287 (318)
Q Consensus 221 ~~~~~~--------~~~~~~~~~~~--~~~~~~~~~--~~~-~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 287 (318)
...+.. ........+.. +........ .++ --+.++.+++|..+|......+.+.+|++++..++ +|
T Consensus 265 ~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gG 343 (371)
T KOG1551|consen 265 AQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GG 343 (371)
T ss_pred hhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCCEEEEee-cC
Confidence 011100 01111111110 000011111 112 12567789999999998999999999999999999 69
Q ss_pred cc--CCCChHHHHHHHHHHHHhhc
Q 021050 288 HG--YTNHQAELVSVVLDFVKASL 309 (318)
Q Consensus 288 H~--~~~~~~~~~~~i~~fl~~~~ 309 (318)
|. +..+.+.+...|.+-|++.-
T Consensus 344 HVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 344 HVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred ceeeeehhchHHHHHHHHHHHhhh
Confidence 99 45677889999999888754
No 150
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.05 E-value=3.1e-10 Score=87.06 Aligned_cols=91 Identities=23% Similarity=0.287 Sum_probs=57.1
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCce---EEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGIS---AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAI 159 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l 159 (318)
.||||+||.+++.. ..|..+++.|.++||. +++++|-...............+.+.++.++|+.+... +. +|-|
T Consensus 2 ~PVVlVHG~~~~~~-~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAY-SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTC-GGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchh-hCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 47999999998654 4689999999999999 79999854333221111111123356777777777665 66 9999
Q ss_pred EEEechHHHHHHHHhhc
Q 021050 160 LGHSKGGSVVLLYASKY 176 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~ 176 (318)
|||||||.++-.+....
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999998887644
No 151
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.04 E-value=7.8e-09 Score=82.86 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=80.1
Q ss_pred CCcEEEEEEecCC------CCeEEEEEccCCCCCCChhHHHHHHHHHHc---------CceEEEEcCCCCCCCCCCccC-
Q 021050 69 YGERLVGVLHDAE------SSEIVVLCHGFRSTKDDPSMVNLAVALQNE---------GISAFRFDFAGNGESEGSFQY- 132 (318)
Q Consensus 69 ~g~~l~~~~~~~~------~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~---------G~~v~~~d~~g~G~s~~~~~~- 132 (318)
.|.+++..-..+. +--+++++||++|+- +.+-.++..|.+. -|.|+++.+||+|-|+++...
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv--~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV--REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchH--HHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 5666665433221 234799999999999 6688888888554 268999999999999987642
Q ss_pred CChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEE
Q 021050 133 GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFV 183 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 183 (318)
.+..+.+.-+..++-.| +.+++.|-|.-+|+.++..+|..+|+ |.|+=
T Consensus 210 Fn~~a~ArvmrkLMlRL---g~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRL---GYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred ccHHHHHHHHHHHHHHh---CcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 34233333333333333 88999999999999999999999998 76653
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.03 E-value=5e-09 Score=88.87 Aligned_cols=180 Identities=22% Similarity=0.257 Sum_probs=114.1
Q ss_pred CCeEEEEEccCC-CCCCChhHHHHHHHHHHcC--ceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-----C
Q 021050 82 SSEIVVLCHGFR-STKDDPSMVNLAVALQNEG--ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-----N 153 (318)
Q Consensus 82 ~~~~vv~~hG~~-~~~~~~~~~~~~~~l~~~G--~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----~ 153 (318)
..|.++++||.+ ....+..+..+...|.-.| ..+..+|++.-- ...++...++.+..+.++...+ .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i------gG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI------GGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC------CCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 367899999988 2222222333444443333 456677776320 1134445555555555533322 5
Q ss_pred CCcEEEEEEechHHHHHHHHhhcCC--ccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHH
Q 021050 154 RAVGAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 231 (318)
Q Consensus 154 ~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
..+|+|+|.|||+.++.....-..+ |+++|+++-+.+-.++.... .++.+
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgi----------------------------rDE~L 300 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGI----------------------------RDEAL 300 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCC----------------------------cchhh
Confidence 5689999999998888877666554 89999887655443221100 01111
Q ss_pred HHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC-CCEEEEECCCCccCCC-C---------hHHHHHH
Q 021050 232 MDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHGYTN-H---------QAELVSV 300 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-~---------~~~~~~~ 300 (318)
. .++.|+|||.|.+|..+++...+++++++. ..+++++.+++|.+-- . ..++...
T Consensus 301 l--------------dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~ 366 (784)
T KOG3253|consen 301 L--------------DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSA 366 (784)
T ss_pred H--------------hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHH
Confidence 1 348899999999999999999999998875 5789999999999631 1 2445555
Q ss_pred HHHHHHhhc
Q 021050 301 VLDFVKASL 309 (318)
Q Consensus 301 i~~fl~~~~ 309 (318)
+.+||.+.+
T Consensus 367 i~~aI~efv 375 (784)
T KOG3253|consen 367 IAQAIKEFV 375 (784)
T ss_pred HHHHHHHHH
Confidence 555555544
No 153
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=2.5e-09 Score=83.92 Aligned_cols=100 Identities=17% Similarity=0.173 Sum_probs=83.0
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
|+++++|+.+|.. +.|..++..|... ..|+.++.||++.-. ....+++++++...+.|..+. +..++.|.|||
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~Q--P~GPy~L~G~S 73 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQ--PEGPYVLLGWS 73 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhC--CCCCEEEEeec
Confidence 5799999999999 7799999999888 999999999998633 334567888888877777664 44579999999
Q ss_pred chHHHHHHHHhhcC----CccEEEEeccCcc
Q 021050 164 KGGSVVLLYASKYN----DIRTFVNVSGRYD 190 (318)
Q Consensus 164 ~Gg~~a~~~a~~~p----~v~~~v~~~~~~~ 190 (318)
+||.+|+.+|.+.. +|..++++++...
T Consensus 74 ~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 74 LGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999998762 2999999988776
No 154
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.98 E-value=1.5e-07 Score=80.19 Aligned_cols=128 Identities=12% Similarity=0.110 Sum_probs=74.4
Q ss_pred ceeEEEEeCC-CCcEEEEEEecC-----CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCc----eEEEEcCCCCCCCCC
Q 021050 59 KQQELVIPNK-YGERLVGVLHDA-----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI----SAFRFDFAGNGESEG 128 (318)
Q Consensus 59 ~~~~v~~~~~-~g~~l~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~----~v~~~d~~g~G~s~~ 128 (318)
..+.+.+.+. -|....++++.+ .+.|+|+++||....... ........|.++|. .++.+|..+......
T Consensus 179 ~~~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~-~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~ 257 (411)
T PRK10439 179 PAKEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESM-PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ 257 (411)
T ss_pred ceEEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcC-CHHHHHHHHHHcCCCCceEEEEECCCCcccccc
Confidence 3355566543 344444444432 246899999996533321 23344556655653 356777532111111
Q ss_pred CccCCChhhhHHHH-HHHHHHHHhC-----CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCc
Q 021050 129 SFQYGNYWREADDL-RAVVQYFCGA-----NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 189 (318)
Q Consensus 129 ~~~~~~~~~~~~d~-~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 189 (318)
. ...-..+.+.+ .+++-++.++ +.++.+|+|+||||..|+.++.++|+ +.+++.+|+.+
T Consensus 258 e--l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 258 E--LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred c--CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 1 11111222222 3334444433 55678999999999999999999999 99999999864
No 155
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.97 E-value=1.3e-09 Score=89.65 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=69.8
Q ss_pred CCCeEEEEEccCCCCC-CChhHHHHHHHHHH---cCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC---C
Q 021050 81 ESSEIVVLCHGFRSTK-DDPSMVNLAVALQN---EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---N 153 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~---~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~ 153 (318)
.++|++|++||+.++. .......+.+.+.+ .+++|+++|+...-...-.............+..+|..|... +
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 3789999999999888 44455566665534 479999999963211100000011233345666777777632 6
Q ss_pred CCcEEEEEEechHHHHHHHHhhcCC---ccEEEEeccCccc
Q 021050 154 RAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYDL 191 (318)
Q Consensus 154 ~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~ 191 (318)
.++++|+|||+||++|-.++..... |..++.++|....
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 7899999999999999998887655 9999999986544
No 156
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.96 E-value=3.7e-09 Score=89.88 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcC
Q 021050 99 PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
.+|..+++.|.+.||.+ ..|++|+|.+.+... ......+++.++++.+... +..+++|+||||||.++..++..+|
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 67999999999999865 889999999876532 2455678888888877654 6679999999999999999998887
Q ss_pred C-----ccEEEEeccCcccc
Q 021050 178 D-----IRTFVNVSGRYDLK 192 (318)
Q Consensus 178 ~-----v~~~v~~~~~~~~~ 192 (318)
+ |+.+|.+++++.-.
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHHhHhccEEEECCCCCCC
Confidence 5 89999998876543
No 157
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.94 E-value=2.1e-07 Score=76.71 Aligned_cols=235 Identities=15% Similarity=0.192 Sum_probs=129.5
Q ss_pred CcEEEEEEe-cC--CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEE--EEcCCCCCCCCCC---------------
Q 021050 70 GERLVGVLH-DA--ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAF--RFDFAGNGESEGS--------------- 129 (318)
Q Consensus 70 g~~l~~~~~-~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~--~~d~~g~G~s~~~--------------- 129 (318)
..+|.+.+. .+ .....|+++.|+|++.++.++..+.+.+++. |.|+ .++|-+.|..+.-
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 345555553 22 2466899999999999877788888999887 6655 5566665533200
Q ss_pred -------c---cC---CC---------------------------------------hhh----hHHHHHHHHHHHHhC-
Q 021050 130 -------F---QY---GN---------------------------------------YWR----EADDLRAVVQYFCGA- 152 (318)
Q Consensus 130 -------~---~~---~~---------------------------------------~~~----~~~d~~~~i~~l~~~- 152 (318)
. .. .. |.. .+-|+..++.++...
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 0 00 00 000 134555556555554
Q ss_pred ---C-CCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHH--HHHhccCC------------c
Q 021050 153 ---N-RAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYM--EKIMQDGF------------I 213 (318)
Q Consensus 153 ---~-~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------~ 213 (318)
+ .-+++++|+|.||++|...|.-.|. +++++=-++...+. +.-.++++.. +....... .
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~--l~~I~Gre~~~~~y~~~~~~~~~~~~~i~~~~K 255 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPP--LRYIFGREIDFMKYICSGEFFNFKNIRIYCFDK 255 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccch--hheeeeeecCcccccccccccccCCEEEEEEec
Confidence 2 2489999999999999999999999 88888666654432 1111222211 00000000 0
Q ss_pred cccCCCCcceeeechHH--HHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEEEE----
Q 021050 214 DVKNKTGDVEYRVTEES--LMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVV---- 283 (318)
Q Consensus 214 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~---- 283 (318)
..........+.++.+. ++..+..+..........++-.+..|+..|+.+|.+.-+.+++.+. +++++.+
T Consensus 256 t~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes 335 (403)
T PF11144_consen 256 TFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDES 335 (403)
T ss_pred cccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChh
Confidence 01111122222233322 2233333333333222234556667999999999988888877654 5777777
Q ss_pred -------CCCCccC-CCChHHHHHHHHHHHHh
Q 021050 284 -------EGANHGY-TNHQAELVSVVLDFVKA 307 (318)
Q Consensus 284 -------~~~gH~~-~~~~~~~~~~i~~fl~~ 307 (318)
.+..|.+ +....-+.+.+-.-+++
T Consensus 336 ~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek 367 (403)
T PF11144_consen 336 EIDGKFIKNLEHGMGISDKALFKKELPLMLEK 367 (403)
T ss_pred hccchheeccccCCCCCHHHHHHHHhHHHHHH
Confidence 3456775 33333344444444444
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.90 E-value=1.7e-07 Score=66.64 Aligned_cols=184 Identities=16% Similarity=0.214 Sum_probs=103.1
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEech
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 165 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 165 (318)
|+++||+.++..+..-..+.+++... ...+.+ +.... ..+....++.+.+++... +.+...|+|.|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y-------~~p~l-~h~p~~a~~ele~~i~~~---~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEY-------STPHL-PHDPQQALKELEKAVQEL---GDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceee-------ecCCC-CCCHHHHHHHHHHHHHHc---CCCCceEEeecch
Confidence 79999999988764444445555444 222222 22111 234566677788777766 4455899999999
Q ss_pred HHHHHHHHhhcCCccEEEEeccCccccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHHHHhhccChHHHhhh
Q 021050 166 GSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQ 245 (318)
Q Consensus 166 g~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (318)
|+.|.+++.++. +++++ ++|...+.+.+...+++ .........+.+....+...-.....
T Consensus 70 GY~At~l~~~~G-irav~-~NPav~P~e~l~gylg~-------------~en~ytg~~y~le~~hI~~l~~~~~~----- 129 (191)
T COG3150 70 GYYATWLGFLCG-IRAVV-FNPAVRPYELLTGYLGR-------------PENPYTGQEYVLESRHIATLCVLQFR----- 129 (191)
T ss_pred HHHHHHHHHHhC-Chhhh-cCCCcCchhhhhhhcCC-------------CCCCCCcceEEeehhhHHHHHHhhcc-----
Confidence 999999988764 55444 66766554444333221 01111112222222222221111111
Q ss_pred ccC-CCcEEEEEcCC-CCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHHH
Q 021050 246 IDM-ECSVLTIHGSS-DKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVK 306 (318)
Q Consensus 246 ~~~-~~P~lii~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 306 (318)
.+ +...+++.... |++.+...+ .+.++.+...+.+|+.|.|. +-+...+.|..|..
T Consensus 130 -~l~~p~~~~lL~qtgDEvLDyr~a---~a~y~~~~~~V~dgg~H~F~-~f~~~l~~i~aF~g 187 (191)
T COG3150 130 -ELNRPRCLVLLSQTGDEVLDYRQA---VAYYHPCYEIVWDGGDHKFK-GFSRHLQRIKAFKG 187 (191)
T ss_pred -ccCCCcEEEeecccccHHHHHHHH---HHHhhhhhheeecCCCcccc-chHHhHHHHHHHhc
Confidence 11 23355555555 988765444 34456677888999999974 22455667777753
No 159
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.87 E-value=4.3e-07 Score=67.83 Aligned_cols=104 Identities=18% Similarity=0.177 Sum_probs=78.5
Q ss_pred CCeEEEEEccCCCCCC-ChhHHHHHHHHHHcCceEEEEcCC----CCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCC
Q 021050 82 SSEIVVLCHGFRSTKD-DPSMVNLAVALQNEGISAFRFDFA----GNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRA 155 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~----g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~ 155 (318)
.+-.|||+-|++..-- ..+...+..+|.+.+|..+-+-++ |+|.+ ++.+.++|+..+++++... ...
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~-------slk~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF-------SLKDDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc-------cccccHHHHHHHHHHhhccCccc
Confidence 3467899998886652 245678999999999999998776 34433 4555689999999988655 235
Q ss_pred cEEEEEEechHHHHHHHHhh--cCC-ccEEEEeccCcccc
Q 021050 156 VGAILGHSKGGSVVLLYASK--YND-IRTFVNVSGRYDLK 192 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~~a~~--~p~-v~~~v~~~~~~~~~ 192 (318)
.|+|+|||.|+.-.+.+... .++ |.+.|+.+|..+..
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 89999999999988887733 244 88888888876654
No 160
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.85 E-value=2.7e-08 Score=79.80 Aligned_cols=113 Identities=19% Similarity=0.153 Sum_probs=64.2
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcC----ceEEEEcCCCCCCCCC----------C-ccCCChhhhHHHH-H
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEG----ISAFRFDFAGNGESEG----------S-FQYGNYWREADDL-R 143 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~~g~G~s~~----------~-~~~~~~~~~~~d~-~ 143 (318)
..+-|+|+++||................+...| ..+++++..+.+.... . ........+.+.+ .
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 346799999999821111011222333333332 3455666554441110 0 0111112222222 3
Q ss_pred HHHHHHHhC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcccc
Q 021050 144 AVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 192 (318)
Q Consensus 144 ~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 192 (318)
+++.++.++ ...+..|+|+||||..|+.++.++|+ +.+++++||.....
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 455555554 22238999999999999999999999 99999999876554
No 161
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.80 E-value=9.5e-07 Score=74.57 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=54.7
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-c
Q 021050 103 NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-I 179 (318)
Q Consensus 103 ~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v 179 (318)
.+...| +.|+.|+.+.+.- .+....++.+.......+++.+... +..+.+|+|-|.||+.++++|+.+|+ +
T Consensus 92 evG~AL-~~GHPvYFV~F~p-----~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 92 EVGVAL-RAGHPVYFVGFFP-----EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHH-HcCCCeEEEEecC-----CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 344444 5589998887751 1222234444444445555555544 23489999999999999999999999 6
Q ss_pred cEEEEeccCcccc
Q 021050 180 RTFVNVSGRYDLK 192 (318)
Q Consensus 180 ~~~v~~~~~~~~~ 192 (318)
.-+|+.+++.+..
T Consensus 166 gplvlaGaPlsyw 178 (581)
T PF11339_consen 166 GPLVLAGAPLSYW 178 (581)
T ss_pred CceeecCCCcccc
Confidence 6666666655443
No 162
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.80 E-value=2.5e-07 Score=71.94 Aligned_cols=95 Identities=18% Similarity=0.079 Sum_probs=64.1
Q ss_pred EEccCC--CCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEech
Q 021050 88 LCHGFR--STKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 165 (318)
Q Consensus 88 ~~hG~~--~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 165 (318)
++|+.+ ++. ..|..+...|... +.++.++.+|++.+.... .++...+++....+... ....+++++|||+|
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~G 74 (212)
T smart00824 2 CFPSTAAPSGP--HEYARLAAALRGR-RDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRA--AGGRPFVLVGHSSG 74 (212)
T ss_pred ccCCCCCCCcH--HHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHh--cCCCCeEEEEECHH
Confidence 455544 333 5688888888764 899999999998665432 24444444444333322 13457999999999
Q ss_pred HHHHHHHHhhc---CC-ccEEEEeccCc
Q 021050 166 GSVVLLYASKY---ND-IRTFVNVSGRY 189 (318)
Q Consensus 166 g~~a~~~a~~~---p~-v~~~v~~~~~~ 189 (318)
|.++..++.+. +. +.+++++++..
T Consensus 75 g~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 75 GLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 99999888864 23 88888776543
No 163
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.78 E-value=3.9e-08 Score=78.18 Aligned_cols=209 Identities=12% Similarity=0.064 Sum_probs=113.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC---CCCcEEEEE
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILG 161 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G 161 (318)
++|++=||.+... .......+...+.|+.++.+-.+-....... ... ...+..+++.+.+. +..++.+-.
T Consensus 1 plvvl~gW~gA~~-~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~---~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKP-KHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRL---APAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cch---HHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 3667778776654 4566777777779999999887632111111 122 22333344444443 223799999
Q ss_pred EechHHHHHHHHhh-----------cCCccEEEEeccCccccch-hhhhhhHHHHHHHhccCCcccc--CCCCcceee--
Q 021050 162 HSKGGSVVLLYASK-----------YNDIRTFVNVSGRYDLKGG-IEDRLGKDYMEKIMQDGFIDVK--NKTGDVEYR-- 225 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~-----------~p~v~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-- 225 (318)
+|.||...+..... .|.++++|+-|++...... ....+ ...+......... .........
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAF----SAALPKSSPRWFVPLWPLLQFLLRLS 149 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHH----HHHcCccchhhHHHHHHHHHHHHHHH
Confidence 99988876654431 1338999988876543220 00000 0000000000000 000000000
Q ss_pred ------echHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEEEECCCCccCC--CC
Q 021050 226 ------VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYT--NH 293 (318)
Q Consensus 226 ------~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~ 293 (318)
.......... .............+|-++++++.|.+++.+..++..+... +++...++++.|.-+ .+
T Consensus 150 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~ 228 (240)
T PF05705_consen 150 IISYFIFGYPDVQEYY-RRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKH 228 (240)
T ss_pred HHHHHHhcCCcHHHHH-HHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccC
Confidence 0000000000 0001111112447899999999999999988887766543 367788899999953 78
Q ss_pred hHHHHHHHHHHH
Q 021050 294 QAELVSVVLDFV 305 (318)
Q Consensus 294 ~~~~~~~i~~fl 305 (318)
++++++.+.+|+
T Consensus 229 p~~Y~~~v~~fw 240 (240)
T PF05705_consen 229 PDRYWRAVDEFW 240 (240)
T ss_pred HHHHHHHHHhhC
Confidence 899999999884
No 164
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.73 E-value=1.9e-07 Score=73.26 Aligned_cols=110 Identities=19% Similarity=0.269 Sum_probs=74.9
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCc--eEEEEcCCCCCCCCCCc-cCCChhhhHHHHHHHHHHHHhC-CCCc
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI--SAFRFDFAGNGESEGSF-QYGNYWREADDLRAVVQYFCGA-NRAV 156 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~~g~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~-~~~~ 156 (318)
+++.++||+||+..+.+. -....++.....|+ .++.+.+|..|.-..-. ...+......++..+++.|... +..+
T Consensus 16 ~~~~vlvfVHGyn~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 467899999999988643 22333333333334 79999999877532211 1122333467788888888777 7789
Q ss_pred EEEEEEechHHHHHHHHhhc------C----CccEEEEeccCccc
Q 021050 157 GAILGHSKGGSVVLLYASKY------N----DIRTFVNVSGRYDL 191 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~------p----~v~~~v~~~~~~~~ 191 (318)
|+|++||||+.+.+.+.... | .+..+++++|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999998876542 1 16788888875544
No 165
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.73 E-value=5.3e-07 Score=77.99 Aligned_cols=128 Identities=20% Similarity=0.147 Sum_probs=81.6
Q ss_pred EEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHH-------------------HHHHcCceEEEE
Q 021050 62 ELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAV-------------------ALQNEGISAFRF 118 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------~l~~~G~~v~~~ 118 (318)
.+.+....+..+.+++++. .+.|+||++.|++|.+ ..+-.+.+ .+.+. .+++-+
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~S--S~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~i 91 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCS--SMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFI 91 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB---THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE
T ss_pred EEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceec--cccccccccCceEEeecccccccccccccccc-cceEEE
Confidence 3455545678888888864 3689999999999887 34433221 12222 578999
Q ss_pred cCC-CCCCCCCCccC---CChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhh----c-----CC--c
Q 021050 119 DFA-GNGESEGSFQY---GNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASK----Y-----ND--I 179 (318)
Q Consensus 119 d~~-g~G~s~~~~~~---~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----~-----p~--v 179 (318)
|.| |.|.|...... .+.++.++|+..+++.+-.. ...+++|.|.|+||..+-.+|.. . +. +
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 955 89988765433 25566677887777655444 34589999999999987766654 2 13 8
Q ss_pred cEEEEeccCcccc
Q 021050 180 RTFVNVSGRYDLK 192 (318)
Q Consensus 180 ~~~v~~~~~~~~~ 192 (318)
+|+++.+|..+..
T Consensus 172 kGi~IGng~~dp~ 184 (415)
T PF00450_consen 172 KGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEESE-SBHH
T ss_pred ccceecCcccccc
Confidence 9999999876543
No 166
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.68 E-value=1.1e-07 Score=84.05 Aligned_cols=120 Identities=17% Similarity=0.083 Sum_probs=75.3
Q ss_pred CCCcEEEEEEec----CCCCeEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCC-C---CCCCCCCccCCChhh
Q 021050 68 KYGERLVGVLHD----AESSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFA-G---NGESEGSFQYGNYWR 137 (318)
Q Consensus 68 ~~g~~l~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~-g---~G~s~~~~~~~~~~~ 137 (318)
.|-..|..+.-. ..+.|+||++||++....+.... ....|... |+.|+.++|| | +....... ..-..
T Consensus 76 Edcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~--~~~n~ 152 (493)
T cd00312 76 EDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE--LPGNY 152 (493)
T ss_pred CcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCC--CCcch
Confidence 455555543321 23569999999976433221111 22344443 3899999999 3 22222111 11122
Q ss_pred hHHHHHHHHHHHHhC------CCCcEEEEEEechHHHHHHHHhhc--CC-ccEEEEeccCcc
Q 021050 138 EADDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKY--ND-IRTFVNVSGRYD 190 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 190 (318)
-..|...+++|++++ +.++|.|+|+|.||.++..++... +. ++++|+.++...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 267888888888876 577999999999999998877663 22 888888887554
No 167
>PLN02606 palmitoyl-protein thioesterase
Probab=98.68 E-value=2.1e-06 Score=68.38 Aligned_cols=102 Identities=20% Similarity=0.177 Sum_probs=66.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCccC-CChhhhHHHHHHHHHHHHhC--CCCcE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQY-GNYWREADDLRAVVQYFCGA--NRAVG 157 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~~~-~~~~~~~~d~~~~i~~l~~~--~~~~i 157 (318)
...+||+.||+|.+..+.-+..+.+.+.+. |+.+..+. .|-+. ..+. .... +.+..+++.+... -.+-+
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~---~Qv~~vce~l~~~~~L~~G~ 97 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLR---QQASIACEKIKQMKELSEGY 97 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHH---HHHHHHHHHHhcchhhcCce
Confidence 456799999999554434577888888533 66655554 22221 1111 2333 4444444444432 12349
Q ss_pred EEEEEechHHHHHHHHhhcCC---ccEEEEeccCcc
Q 021050 158 AILGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 190 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 190 (318)
.++|+|.||.++-.++.++|+ |+.+|.++++..
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999865 999999988643
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.61 E-value=3.5e-06 Score=69.26 Aligned_cols=221 Identities=20% Similarity=0.231 Sum_probs=118.7
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC----------ccCCC---hhhhHHHHHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS----------FQYGN---YWREADDLRAVVQY 148 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~----------~~~~~---~~~~~~d~~~~i~~ 148 (318)
+-|.+++.||+++.... .......++..++.++..+....|.+... ..... +.....++...-..
T Consensus 48 ~~p~v~~~h~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQ--SLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred cCceEEeccCccccccC--cchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 56889999999999864 33377788888888887775333322211 10000 00000111111111
Q ss_pred HHhCCCCcEEEEEEechHHHHHHHHhhcCC---ccEEEEeccCccccchhhhh-----hhHHHHHHHhcc-CCccccCCC
Q 021050 149 FCGANRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYDLKGGIEDR-----LGKDYMEKIMQD-GFIDVKNKT 219 (318)
Q Consensus 149 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~ 219 (318)
.......+....|+++|+..+..++...+. ...++............... ........+... .+... ..
T Consensus 126 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 203 (299)
T COG1073 126 LLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPL--PA 203 (299)
T ss_pred HHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCC--Cc
Confidence 111133678999999999999998888762 33333333322221111110 011111111111 11111 00
Q ss_pred Ccceee-echHHHHHhhccChHHHhhhccCC-CcEEEEEcCCCCccCcchhHHHHhhCCC--CEEEEECCCCccCCC-Ch
Q 021050 220 GDVEYR-VTEESLMDRLNTNMHDACLQIDME-CSVLTIHGSSDKIIPLQDAHEFDKIIPN--HKLHVVEGANHGYTN-HQ 294 (318)
Q Consensus 220 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-~~ 294 (318)
...... .... .......+...... .+. +|+|+++|.+|..+|...+..+++.... .+..++++++|.... ..
T Consensus 204 ~~~~~~~~~~~-~~~~~~~d~~~~~~--~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 280 (299)
T COG1073 204 PEAPLDTLPLR-AVLLLLLDPFDDAE--KISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP 280 (299)
T ss_pred ccccccccccc-hhhhccCcchhhHh--hcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc
Confidence 000000 0111 11122222222222 223 7999999999999999999988887765 578888999999752 33
Q ss_pred H---HHHHHHHHHHHhhc
Q 021050 295 A---ELVSVVLDFVKASL 309 (318)
Q Consensus 295 ~---~~~~~i~~fl~~~~ 309 (318)
+ +....+.+|+.+.+
T Consensus 281 ~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 281 PAVEQALDKLAEFLERHL 298 (299)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 2 68899999998765
No 169
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.61 E-value=2.1e-07 Score=80.75 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=70.6
Q ss_pred CCeEEEEEccCCCCCCC-hhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCc-------cCCChhhhHHHHHHHHHHHHhC
Q 021050 82 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNE-GISAFRFDFAGNGESEGSF-------QYGNYWREADDLRAVVQYFCGA 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~ 152 (318)
++|++|++-| -+..+. +....+...|+++ |-.+++++.|.+|.|.... ...+.++..+|+..++++++.+
T Consensus 28 ~gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 4776666644 333321 2223344555544 7889999999999998432 2345678899999999999854
Q ss_pred ----CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcc
Q 021050 153 ----NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 190 (318)
Q Consensus 153 ----~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 190 (318)
...+++++|-|+||++|..+-.++|+ |.|.+.-|++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 34589999999999999999999999 899998888753
No 170
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.59 E-value=3.1e-07 Score=77.21 Aligned_cols=122 Identities=14% Similarity=0.058 Sum_probs=77.8
Q ss_pred CCCcEEEEEEec-C-CCCeEEEEEccCCCCCCC-hhHHHHHHHHHHcC-ceEEEEcCCC--CCCCCCCc----cCCChhh
Q 021050 68 KYGERLVGVLHD-A-ESSEIVVLCHGFRSTKDD-PSMVNLAVALQNEG-ISAFRFDFAG--NGESEGSF----QYGNYWR 137 (318)
Q Consensus 68 ~~g~~l~~~~~~-~-~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G-~~v~~~d~~g--~G~s~~~~----~~~~~~~ 137 (318)
.|...|..+.-+ + .+.|+||+|||++....+ .....=-..|+++| +.|+.+|||- .|.-.... ....-.-
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 455556543323 2 256999999998733321 11112235677777 9999999982 12211110 0000012
Q ss_pred hHHHHHHHHHHHHhC------CCCcEEEEEEechHHHHHHHHhhcCC----ccEEEEeccCcc
Q 021050 138 EADDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD 190 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 190 (318)
-..|...+++|++++ ++++|.|+|+|.||+.++.+.+- |. ++.+|+.|+...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 267888888888877 67899999999999988876654 55 777788888764
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.57 E-value=2.8e-05 Score=62.18 Aligned_cols=106 Identities=18% Similarity=0.213 Sum_probs=69.0
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
....++|+.||+|.+..+.-...+.+.+.+. |..+.++.. |.+....-.....++++.+.+.+...... .+-+.+
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l-~~G~na 98 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKEL-SQGYNI 98 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhh-hCcEEE
Confidence 3456799999999887654566777777553 666666654 33321111223444444444444332221 234999
Q ss_pred EEEechHHHHHHHHhhcCC---ccEEEEeccCcc
Q 021050 160 LGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 190 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 190 (318)
+|+|.||.++-.++.++|+ |+.+|.++++..
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999865 999999988643
No 172
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=1.2e-05 Score=62.12 Aligned_cols=101 Identities=19% Similarity=0.273 Sum_probs=70.8
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC--CCCcEEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA--NRAVGAIL 160 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~ 160 (318)
-++|++||++....+.....+.+.+.+. |..|+++|. |-| ......... .+.+..+++.+... -.+-+.++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl---~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPL---WEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccH---HHHHHHHHHHHhcchhccCceEEE
Confidence 5799999999888554577788888775 888899886 333 111111223 34444445554432 23458999
Q ss_pred EEechHHHHHHHHhhcCC--ccEEEEeccCcc
Q 021050 161 GHSKGGSVVLLYASKYND--IRTFVNVSGRYD 190 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~ 190 (318)
|.|.||.++-.++...++ |+..|.++++..
T Consensus 98 g~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred EEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 999999999999988877 999999988654
No 173
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.48 E-value=4.1e-06 Score=69.38 Aligned_cols=150 Identities=13% Similarity=0.166 Sum_probs=94.5
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccC-ccccchhhhhhhHHHHHHHh-ccCCccccC-CCCcceeeechH
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGR-YDLKGGIEDRLGKDYMEKIM-QDGFIDVKN-KTGDVEYRVTEE 229 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 229 (318)
..++++|.|.|==|..++..|+..|+|++++-+.-. .++...+...+. .+- .-.+ .+.. ........+..+
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~-----~yG~~ws~-a~~dY~~~gi~~~l~tp 243 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYR-----SYGGNWSF-AFQDYYNEGITQQLDTP 243 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHH-----HhCCCCcc-chhhhhHhCchhhcCCH
Confidence 678999999999999999999988889888866432 233322222111 000 0000 0000 000111111122
Q ss_pred HHHHhhc-cChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCCC-CEEEEECCCCccCCCChHHHHHHHHHHHHh
Q 021050 230 SLMDRLN-TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKLHVVEGANHGYTNHQAELVSVVLDFVKA 307 (318)
Q Consensus 230 ~~~~~~~-~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 307 (318)
.+..... .++..... ++++|.++|.|..|++..++...-+.+.+++ +.+..+|+++|.... ..+.+.+..|+..
T Consensus 244 ~f~~L~~ivDP~~Y~~--rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 244 EFDKLMQIVDPYSYRD--RLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYNR 319 (367)
T ss_pred HHHHHHHhcCHHHHHH--hcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHHH
Confidence 2221111 12222222 4489999999999999999999999999986 678889999999764 7788899999998
Q ss_pred hcCCC
Q 021050 308 SLKQD 312 (318)
Q Consensus 308 ~~~~~ 312 (318)
.+...
T Consensus 320 ~~~~~ 324 (367)
T PF10142_consen 320 IQNGR 324 (367)
T ss_pred HHcCC
Confidence 76443
No 174
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.47 E-value=6.9e-07 Score=79.96 Aligned_cols=107 Identities=13% Similarity=0.042 Sum_probs=66.4
Q ss_pred CCeEEEEEccCCCCCCCh--hHHHHHHHHHHcCceEEEEcCC----CCCCCCCCccCCChhhhHHHHHHHHHHHHhC---
Q 021050 82 SSEIVVLCHGFRSTKDDP--SMVNLAVALQNEGISAFRFDFA----GNGESEGSFQYGNYWREADDLRAVVQYFCGA--- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~----g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 152 (318)
+.|++|++||++....+. ....-...+++++.-|+.++|| |+-.+...... .-..-..|...+++|++++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~-~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP-SGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH-BSTHHHHHHHHHHHHHHHHGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC-chhhhhhhhHHHHHHHHhhhhh
Confidence 369999999987544332 2233344556778999999999 22222111111 1122267888999999887
Q ss_pred ---CCCcEEEEEEechHHHHHHHHhhcC--C-ccEEEEeccCc
Q 021050 153 ---NRAVGAILGHSKGGSVVLLYASKYN--D-IRTFVNVSGRY 189 (318)
Q Consensus 153 ---~~~~i~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~ 189 (318)
++++|.|+|+|.||..+..++..-. . ++++|+.|+..
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 5779999999999998877665522 2 99999999854
No 175
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.47 E-value=1.5e-06 Score=70.90 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=68.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 160 (318)
+...-||+.|-|+-. ..-+.+.+.|+++|+.|+.+|-.-|--| ..+.++.+.|+..+|++...+ +..++.|+
T Consensus 259 sd~~av~~SGDGGWr--~lDk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDGGWR--DLDKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred cceEEEEEecCCchh--hhhHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 455677888877766 3467899999999999999996533222 234567799999999998876 78899999
Q ss_pred EEechHHHHHHHHhhcC
Q 021050 161 GHSKGGSVVLLYASKYN 177 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p 177 (318)
|+|+|+-+.-..-.+.|
T Consensus 332 GySfGADvlP~~~n~L~ 348 (456)
T COG3946 332 GYSFGADVLPFAYNRLP 348 (456)
T ss_pred eecccchhhHHHHHhCC
Confidence 99999988776655554
No 176
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.43 E-value=1.3e-05 Score=62.52 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=49.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCCCCCCCCccCCChhhhHHHHHH-HHHHHHhCC--CCc
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGNGESEGSFQYGNYWREADDLRA-VVQYFCGAN--RAV 156 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~-~i~~l~~~~--~~~ 156 (318)
+.-.||++||+.++. ..|..+...+... .+.-..+.+.++.... .....++...++.+.. +.+.+.... ..+
T Consensus 3 ~~hLvV~vHGL~G~~--~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP--ADMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCH--HHHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 456899999999998 4577777777551 1221122222221111 1112334444444332 223332222 258
Q ss_pred EEEEEEechHHHHHHHHh
Q 021050 157 GAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~ 174 (318)
+.++||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999876554
No 177
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.39 E-value=5e-06 Score=63.30 Aligned_cols=178 Identities=14% Similarity=0.120 Sum_probs=91.1
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceE-EEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISA-FRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v-~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
.+...|||+.|+|.+.. .+..+. ...++.+ +++|||.. ++ |. + + ...+++.|
T Consensus 9 ~~~~LilfF~GWg~d~~--~f~hL~---~~~~~D~l~~yDYr~l----------~~-----d~----~-~--~~y~~i~l 61 (213)
T PF04301_consen 9 NGKELILFFAGWGMDPS--PFSHLI---LPENYDVLICYDYRDL----------DF-----DF----D-L--SGYREIYL 61 (213)
T ss_pred CCCeEEEEEecCCCChH--Hhhhcc---CCCCccEEEEecCccc----------cc-----cc----c-c--ccCceEEE
Confidence 34579999999999873 344332 1234554 56788721 11 11 1 1 15678999
Q ss_pred EEEechHHHHHHHHhhcCCccEEEEeccCcccc---chhhhhhhHHHH--------HHHhccCCccccC--CCCcceeee
Q 021050 160 LGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLK---GGIEDRLGKDYM--------EKIMQDGFIDVKN--KTGDVEYRV 226 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~ 226 (318)
+|+|||-.+|..+.... .++..|.+++...+. .++...+-...+ .++.......... .......+-
T Consensus 62 vAWSmGVw~A~~~l~~~-~~~~aiAINGT~~Pid~~~GIpp~iF~~Tl~~l~ee~~~kF~rrmcg~~~~~~~f~~~~~r~ 140 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGI-PFKRAIAINGTPYPIDDEYGIPPAIFAGTLENLSEENLQKFNRRMCGDKELLEKFQSFPPRR 140 (213)
T ss_pred EEEeHHHHHHHHHhccC-CcceeEEEECCCCCcCCCCCCCHHHHHHHHHhCCHHHHHHHHHHhcCCchhhHHhhcCCcCC
Confidence 99999999998876543 377777787754322 222222222222 2222111111100 000000111
Q ss_pred chHHHHHhhccChHHHhhhccCCCc----EEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCC
Q 021050 227 TEESLMDRLNTNMHDACLQIDMECS----VLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT 291 (318)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~P----~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 291 (318)
+.+.+.+.+..-.... .. ....+ ...+.|++|.++|++..+...+.. +.+..++ ++|+.+
T Consensus 141 ~~~elk~EL~~l~~~~-~~-~~~~~~~~wd~aiIg~~D~IFpp~nQ~~~W~~~--~~~~~~~-~~Hy~F 204 (213)
T PF04301_consen 141 SFEELKEELAALYEFI-KK-NPPADLFHWDKAIIGKKDRIFPPENQKRAWQGR--CTIVEID-APHYPF 204 (213)
T ss_pred CHHHHHHHHHHHHHHH-hc-cCCCCCccccEEEEcCCCEEeCHHHHHHHHhCc--CcEEEec-CCCcCc
Confidence 1122222221111100 00 00111 247889999999999888777643 4566675 799964
No 178
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.37 E-value=5.2e-06 Score=61.73 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=64.7
Q ss_pred CCeEEEEEccCCCCCCChhHHH-HHHHHHHcCceEEEEcCC--CC---CCCCC-Cc----------cCCC-------hhh
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVN-LAVALQNEGISAFRFDFA--GN---GESEG-SF----------QYGN-------YWR 137 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~--g~---G~s~~-~~----------~~~~-------~~~ 137 (318)
+-|++.++.|+.++.+...-.. +.+.-+++|..|+.+|-. |. |+++. .. .... ++.
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 3689999999999886532232 334446679999999864 42 22220 00 0000 111
Q ss_pred hHHHHHHHHHHHH-hCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcc
Q 021050 138 EADDLRAVVQYFC-GANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 190 (318)
Q Consensus 138 ~~~d~~~~i~~l~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 190 (318)
..+++..+++... ..+..++.|.||||||+-|+..+.+.|. .+.+-..+|..+
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 1233333333110 1156789999999999999998888887 666655555433
No 179
>PLN02209 serine carboxypeptidase
Probab=98.36 E-value=0.00024 Score=61.12 Aligned_cols=128 Identities=10% Similarity=0.032 Sum_probs=79.5
Q ss_pred eEEEEeCCCCcEEEEEEecCC----CCeEEEEEccCCCCCCChhHHHHHH-----------------------HHHHcCc
Q 021050 61 QELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAV-----------------------ALQNEGI 113 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~-----------------------~l~~~G~ 113 (318)
-.+.+....|..+.++++++. ..|+++++.|+++.+. .+..+.+ .+.+. .
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS--~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-a 118 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC--LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-A 118 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH--hhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-C
Confidence 445565455777888877643 5799999999987772 2211110 11222 5
Q ss_pred eEEEEcC-CCCCCCCCCcc--CCChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhh----c-----C
Q 021050 114 SAFRFDF-AGNGESEGSFQ--YGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASK----Y-----N 177 (318)
Q Consensus 114 ~v~~~d~-~g~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----~-----p 177 (318)
+++-+|. -|.|.|-.... ..+-.+.++|+..+++..-+. ...+++|.|.|+||..+-.+|.. . +
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 7888895 47888853321 122234456676666554433 23579999999999876666543 1 2
Q ss_pred C--ccEEEEeccCccc
Q 021050 178 D--IRTFVNVSGRYDL 191 (318)
Q Consensus 178 ~--v~~~v~~~~~~~~ 191 (318)
. ++|+++.++..+.
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 3 7899988886543
No 180
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.29 E-value=2.9e-06 Score=57.39 Aligned_cols=59 Identities=24% Similarity=0.429 Sum_probs=53.4
Q ss_pred CCcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCC-CChHHHHHHHHHHHHh
Q 021050 249 ECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 307 (318)
Q Consensus 249 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 307 (318)
..|+|++.++.|+.+|.+.++.+.+.+++++++.+++.||..+ ....-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5799999999999999999999999999999999999999975 5567788889999874
No 181
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.27 E-value=1.2e-05 Score=65.04 Aligned_cols=110 Identities=17% Similarity=0.266 Sum_probs=75.7
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCc--eEEEEcCCCCCCCCCCc-cCCChhhhHHHHHHHHHHHHhC-CCCc
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI--SAFRFDFAGNGESEGSF-QYGNYWREADDLRAVVQYFCGA-NRAV 156 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~~g~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~-~~~~ 156 (318)
..+.++||+||+..+-+. -....++-....|+ ..+.+.+|..|.--+-. ...+......+++.+|++|... ...+
T Consensus 114 ~~k~vlvFvHGfNntf~d-av~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED-AVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhH-HHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 467899999999987754 23445555555554 56788888655432211 1123334478899999999887 4678
Q ss_pred EEEEEEechHHHHHHHHhhc--------CC-ccEEEEeccCccc
Q 021050 157 GAILGHSKGGSVVLLYASKY--------ND-IRTFVNVSGRYDL 191 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~--------p~-v~~~v~~~~~~~~ 191 (318)
|+|++||||.++++....+. +. ++-+|+.+|-.+.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999998876653 12 7778887775544
No 182
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.25 E-value=0.00072 Score=58.26 Aligned_cols=128 Identities=9% Similarity=0.019 Sum_probs=76.4
Q ss_pred EEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCC-hhHHHHHH-------------H-------HHHcCceEE
Q 021050 62 ELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDD-PSMVNLAV-------------A-------LQNEGISAF 116 (318)
Q Consensus 62 ~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~-~~~~~~~~-------------~-------l~~~G~~v~ 116 (318)
.+.+....+..+.++++++ ...|+|+++.|++|.+.. ..+..... . +.+. .+++
T Consensus 41 y~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anll 119 (433)
T PLN03016 41 YIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANII 119 (433)
T ss_pred EEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEE
Confidence 3455444467788887764 367999999999877621 01111100 1 1222 5788
Q ss_pred EEcC-CCCCCCCCCccC--CChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhh----c-----CC--
Q 021050 117 RFDF-AGNGESEGSFQY--GNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASK----Y-----ND-- 178 (318)
Q Consensus 117 ~~d~-~g~G~s~~~~~~--~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----~-----p~-- 178 (318)
-+|. -|.|.|...... ..-...++++..++...-+. ...+++|+|.|+||..+-.+|.. . +.
T Consensus 120 fiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~in 199 (433)
T PLN03016 120 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPIN 199 (433)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccc
Confidence 9995 488888643321 11122345666555543332 34579999999999977666553 1 22
Q ss_pred ccEEEEeccCcc
Q 021050 179 IRTFVNVSGRYD 190 (318)
Q Consensus 179 v~~~v~~~~~~~ 190 (318)
++|+++-+|..+
T Consensus 200 LkGi~iGNg~t~ 211 (433)
T PLN03016 200 LQGYMLGNPVTY 211 (433)
T ss_pred ceeeEecCCCcC
Confidence 789998888543
No 183
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.24 E-value=4.2e-06 Score=69.62 Aligned_cols=102 Identities=20% Similarity=0.261 Sum_probs=70.6
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCce---EEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS---AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGA 158 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~ 158 (318)
.-++|++||++.+.. .+..+...+...|+. +..+++++- ... ...... .+.+...++.+... +.+++.
T Consensus 59 ~~pivlVhG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~-~~~~~~----~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGLGGGYG--NFLPLDYRLAILGWLTNGVYAFELSGG-DGT-YSLAVR----GEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccCcCCcc--hhhhhhhhhcchHHHhccccccccccc-CCC-cccccc----HHHHHHHHHHHHhhcCCCceE
Confidence 448999999977774 477777778777777 888888855 111 111112 33333333333222 567899
Q ss_pred EEEEechHHHHHHHHhhcC--C-ccEEEEeccCcccc
Q 021050 159 ILGHSKGGSVVLLYASKYN--D-IRTFVNVSGRYDLK 192 (318)
Q Consensus 159 l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~~~~ 192 (318)
++||||||..+..++...+ . |+.++.++++-...
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 9999999999999999988 3 99999998865433
No 184
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.21 E-value=1.4e-05 Score=70.81 Aligned_cols=105 Identities=17% Similarity=0.194 Sum_probs=67.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHH----------------cCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQN----------------EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAV 145 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~----------------~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~ 145 (318)
++-+|+|++|..|+. .-.+.++....+ ..++.+++|+-+-= .........++++.+.++
T Consensus 88 sGIPVLFIPGNAGSy--KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~---tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSY--KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF---TAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCch--HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh---hhhccHhHHHHHHHHHHH
Confidence 567899999999988 345555554432 13567777765300 001123456667888888
Q ss_pred HHHHHhC--C--------CCcEEEEEEechHHHHHHHHhhc---CC-ccEEEEeccCccc
Q 021050 146 VQYFCGA--N--------RAVGAILGHSKGGSVVLLYASKY---ND-IRTFVNVSGRYDL 191 (318)
Q Consensus 146 i~~l~~~--~--------~~~i~l~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~ 191 (318)
|.++.+. + +..|+++||||||.+|..++..- ++ |..++..+.+...
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 8777654 1 45699999999999998765432 22 6777777765543
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.20 E-value=2.7e-05 Score=66.32 Aligned_cols=83 Identities=16% Similarity=0.244 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHcCceE------EEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHH
Q 021050 100 SMVNLAVALQNEGISA------FRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYA 173 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v------~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 173 (318)
.|..+++.|.+.||.. .-+|+|-- . .........+...|+.+.....++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~-------~-~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS-------P-AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc-------h-hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 6999999999988752 22687721 1 12345577788888887766678999999999999999988
Q ss_pred hhcC------C-ccEEEEeccCcc
Q 021050 174 SKYN------D-IRTFVNVSGRYD 190 (318)
Q Consensus 174 ~~~p------~-v~~~v~~~~~~~ 190 (318)
...+ + |+++|.++++..
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 7763 1 999999998764
No 186
>COG0627 Predicted esterase [General function prediction only]
Probab=98.13 E-value=4e-05 Score=62.61 Aligned_cols=225 Identities=18% Similarity=0.152 Sum_probs=110.9
Q ss_pred CCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC--------------CCCCCC------CCc-cC-CChhhh
Q 021050 82 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA--------------GNGESE------GSF-QY-GNYWRE 138 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~--------------g~G~s~------~~~-~~-~~~~~~ 138 (318)
+-|+++++||..++... .....+-+.....|+.++++|-. |-+.|- .+. .. ..+++.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 45788889998887532 23344555666678888887433 211111 000 00 122222
Q ss_pred -HHHHHHHHHHHHhCCC--CcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccccchhhhhhhHHHHHHHhccCCcc
Q 021050 139 -ADDLRAVVQYFCGANR--AVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFID 214 (318)
Q Consensus 139 -~~d~~~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (318)
..++-..++....... ++..++||||||.-|+.+|.++|+ ++.+..++|............. .....-......
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~--~~~~~g~~~~~~ 210 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLA--MGDPWGGKAFNA 210 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccccccccc--ccccccCccHHH
Confidence 2334433332211122 278999999999999999999988 8999988887776533322200 000000000000
Q ss_pred ccCCCCc-ceeeechHHHHHhhccC--hHHHhhhccCCCcEEEEEcCCCCccC--cchhHHHHhhCC----CCEEEEECC
Q 021050 215 VKNKTGD-VEYRVTEESLMDRLNTN--MHDACLQIDMECSVLTIHGSSDKIIP--LQDAHEFDKIIP----NHKLHVVEG 285 (318)
Q Consensus 215 ~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~lii~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~ 285 (318)
....... ...........+.+... ........ ...++++-+|..|.+.. ....+.+.+++. +..+...++
T Consensus 211 ~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~ 289 (316)
T COG0627 211 MLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPG 289 (316)
T ss_pred hcCCCccccccccCchhHHHHhhhcccccceeccc-CCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCC
Confidence 0000000 11111111122211100 00000000 24567777898887764 223455555443 456666688
Q ss_pred CCccCCCChHHHHHHHHHHHHhhcC
Q 021050 286 ANHGYTNHQAELVSVVLDFVKASLK 310 (318)
Q Consensus 286 ~gH~~~~~~~~~~~~i~~fl~~~~~ 310 (318)
++|.+.. =....+....|+.+.++
T Consensus 290 G~Hsw~~-w~~~l~~~~~~~a~~l~ 313 (316)
T COG0627 290 GDHSWYF-WASQLADHLPWLAGALG 313 (316)
T ss_pred CCcCHHH-HHHHHHHHHHHHHHHhc
Confidence 8999521 13445556667666554
No 187
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.10 E-value=1.8e-05 Score=64.96 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=75.8
Q ss_pred eEEEEEccCCCCCCChhHH--HHHHHH-HHcCceEEEEcCCCCCCCCCCcc----------CCChhhhHHHHHHHHHHHH
Q 021050 84 EIVVLCHGFRSTKDDPSMV--NLAVAL-QNEGISAFRFDFAGNGESEGSFQ----------YGNYWREADDLRAVVQYFC 150 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~--~~~~~l-~~~G~~v~~~d~~g~G~s~~~~~----------~~~~~~~~~d~~~~i~~l~ 150 (318)
.+|++.-|.-++.+. +.. .++-.+ .+.+--++-++.|-||+|..-.. ..+.++..+|.+.++.+|+
T Consensus 81 gPIffYtGNEGdie~-Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEW-FANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccHHH-HHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 568888888887742 111 122222 22356788999999999974211 2234677899999999998
Q ss_pred hC---CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccC
Q 021050 151 GA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGR 188 (318)
Q Consensus 151 ~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~ 188 (318)
.. ...+++.+|-|+||++|.++=.++|. +.|++..+++
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 87 45689999999999999999999999 7777766654
No 188
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=98.09 E-value=8.2e-05 Score=61.52 Aligned_cols=109 Identities=22% Similarity=0.266 Sum_probs=85.9
Q ss_pred ecCCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc---cCCChhhhHHHHHHHHHHHHhCCC
Q 021050 78 HDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF---QYGNYWREADDLRAVVQYFCGANR 154 (318)
Q Consensus 78 ~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~---~~~~~~~~~~d~~~~i~~l~~~~~ 154 (318)
+..-.+|+|+..-|.+.... .......+.|. -+-+.+++|-+|.|...+ ...++++.+.|...+++.++..-.
T Consensus 58 Hk~~drPtV~~T~GY~~~~~-p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~ 133 (448)
T PF05576_consen 58 HKDFDRPTVLYTEGYNVSTS-PRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP 133 (448)
T ss_pred EcCCCCCeEEEecCcccccC-ccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc
Confidence 34557899999999887653 22334555553 467999999999998655 345778889999999999987766
Q ss_pred CcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcc
Q 021050 155 AVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 190 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 190 (318)
.+.+--|-|-||+.++.+=.-+|+ |++.|...++.+
T Consensus 134 ~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 134 GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 788889999999999988788898 999998777654
No 189
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.06 E-value=0.0012 Score=56.60 Aligned_cols=126 Identities=17% Similarity=0.119 Sum_probs=80.2
Q ss_pred eEEEEeCCCCcEEEEEEecC----CCCeEEEEEccCCCCCCChhHHHHHHHH-------------------HHcCceEEE
Q 021050 61 QELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVAL-------------------QNEGISAFR 117 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l-------------------~~~G~~v~~ 117 (318)
-.+.+....+..+.+++++. ...|.||++.|++|.+. .. .+...+ .+ --+++-
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS--l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk-~aNiLf 122 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS--LG-GLFEENGPFRVKYNGKTLYLNPYSWNK-EANILF 122 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc--hh-hhhhhcCCeEEcCCCCcceeCCccccc-cccEEE
Confidence 45666666799999998874 35789999999988772 22 222111 11 135777
Q ss_pred EcCC-CCCCCCCCcc---CCChhhhHHHHHHHH-HHHHhC---CCCcEEEEEEechHHHHHHHHhh----c-----CC--
Q 021050 118 FDFA-GNGESEGSFQ---YGNYWREADDLRAVV-QYFCGA---NRAVGAILGHSKGGSVVLLYASK----Y-----ND-- 178 (318)
Q Consensus 118 ~d~~-g~G~s~~~~~---~~~~~~~~~d~~~~i-~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~-----p~-- 178 (318)
+|.| |.|.|-.... ..+-...++|...++ +|+.+. ...++.|.|-|++|...-.+|.+ + |.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 7877 6666643221 123344466665555 455544 45689999999999776665543 2 22
Q ss_pred ccEEEEeccCcc
Q 021050 179 IRTFVNVSGRYD 190 (318)
Q Consensus 179 v~~~v~~~~~~~ 190 (318)
++|+++-+|..+
T Consensus 203 LkG~~IGNg~td 214 (454)
T KOG1282|consen 203 LKGYAIGNGLTD 214 (454)
T ss_pred ceEEEecCcccC
Confidence 889988887543
No 190
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.02 E-value=1.9e-05 Score=62.50 Aligned_cols=108 Identities=19% Similarity=0.309 Sum_probs=55.2
Q ss_pred CCCCeEEEEEccCCCCCCC-hhHHHHHHHHHHc--CceEEEEcCCCCCCCCCCccCCC-hhhhHHHHHHHHHHHHhCC--
Q 021050 80 AESSEIVVLCHGFRSTKDD-PSMVNLAVALQNE--GISAFRFDFAGNGESEGSFQYGN-YWREADDLRAVVQYFCGAN-- 153 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~--G~~v~~~d~~g~G~s~~~~~~~~-~~~~~~d~~~~i~~l~~~~-- 153 (318)
+.+..+||+.||+|.+... ..+..+.+.+.+. |.-|..++.- -+.++.. ..+ +....+.+..+++.+....
T Consensus 2 ~~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~--~~s~f~~v~~Qv~~vc~~l~~~p~L 78 (279)
T PF02089_consen 2 PPSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDV--ENSFFGNVNDQVEQVCEQLANDPEL 78 (279)
T ss_dssp TTSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHH--HHHHHSHHHHHHHHHHHHHHH-GGG
T ss_pred CCCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhh--hhhHHHHHHHHHHHHHHHHhhChhh
Confidence 3455689999999976521 2355555555443 6677777763 2211100 011 1222333444444444321
Q ss_pred CCcEEEEEEechHHHHHHHHhhcCC--ccEEEEeccCcc
Q 021050 154 RAVGAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYD 190 (318)
Q Consensus 154 ~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~ 190 (318)
.+-+.++|+|.||.++-.++.+++. |+.+|.++++..
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 1359999999999999999999876 999999988643
No 191
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.94 E-value=0.00031 Score=55.85 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=61.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc---CceEEEEcCCCCCCCCCCccCCChhhhHH-HHHHHHHHHHhC-----
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE---GISAFRFDFAGNGESEGSFQYGNYWREAD-DLRAVVQYFCGA----- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~---G~~v~~~d~~g~G~s~~~~~~~~~~~~~~-d~~~~i~~l~~~----- 152 (318)
+.|+++++||-...........+...+++. .-.++.+|+-..-.... .......... -..+++=++++.
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~--~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRRE--ELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHH--HhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 679999999854332212333343333332 23456666542110000 0111112222 223444455444
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL 191 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 191 (318)
..+.-+|+|.|+||.+++..+..+|+ +..++..||.+..
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 34457999999999999999999999 8888888876543
No 192
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.76 E-value=0.0049 Score=48.75 Aligned_cols=105 Identities=8% Similarity=0.037 Sum_probs=71.1
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILG 161 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 161 (318)
+.|.|+++-...++.. ...+.-.+.|... ..|+..|+-..-.-+-.....+++++.+.+.+.++++ +.+ +++++
T Consensus 102 pdPkvLivapmsGH~a-TLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~-~hv~a 175 (415)
T COG4553 102 PDPKVLIVAPMSGHYA-TLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD-AHVMA 175 (415)
T ss_pred CCCeEEEEecccccHH-HHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC-CcEEE
Confidence 4567888888777764 3566667777655 6788888865433333334456777788888888887 544 78888
Q ss_pred EechHH-----HHHHHHhhcCC-ccEEEEeccCcccc
Q 021050 162 HSKGGS-----VVLLYASKYND-IRTFVNVSGRYDLK 192 (318)
Q Consensus 162 ~S~Gg~-----~a~~~a~~~p~-v~~~v~~~~~~~~~ 192 (318)
.|.-+. ++++.+...|. ....++++++.+..
T Consensus 176 VCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 176 VCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred EecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 887654 44444444565 78899999987654
No 193
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.57 E-value=0.02 Score=47.62 Aligned_cols=59 Identities=12% Similarity=0.241 Sum_probs=46.5
Q ss_pred CCcEEEEEcCCCCccCcchhHHHHhhCC------------------------C-CEEEEECCCCccCCCChHHHHHHHHH
Q 021050 249 ECSVLTIHGSSDKIIPLQDAHEFDKIIP------------------------N-HKLHVVEGANHGYTNHQAELVSVVLD 303 (318)
Q Consensus 249 ~~P~lii~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 303 (318)
..++|+..|+.|.+|+.-..+.+.+.+. + .++..+.++||+....|+...+.+..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 5799999999999999877777666542 1 45566778999976678888899999
Q ss_pred HHHh
Q 021050 304 FVKA 307 (318)
Q Consensus 304 fl~~ 307 (318)
||..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9864
No 194
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.57 E-value=0.0013 Score=55.88 Aligned_cols=112 Identities=17% Similarity=0.152 Sum_probs=81.6
Q ss_pred CCCeEEEEEccCCCCCCCh---hHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc-------CCChhhhHHHHHHHHHHHH
Q 021050 81 ESSEIVVLCHGFRSTKDDP---SMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-------YGNYWREADDLRAVVQYFC 150 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~---~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-------~~~~~~~~~d~~~~i~~l~ 150 (318)
..+|..++|-|=|.-.+.| .-..+...-.+.|-.|+.++.|-+|.|..... ..+..+...|+..+|+.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 4678888888755433221 11223333445588999999999998864332 2245677899999999988
Q ss_pred hC----CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcccc
Q 021050 151 GA----NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 192 (318)
Q Consensus 151 ~~----~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 192 (318)
.+ +..+.+.+|.|+-|.++.++=.++|+ +.|.|.-+++....
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~ 210 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAK 210 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEE
Confidence 76 23489999999999999999999999 88888888776433
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.0015 Score=48.99 Aligned_cols=106 Identities=14% Similarity=0.137 Sum_probs=63.3
Q ss_pred CCeEEEEEccCCCCCCChh--------------HHHHHHHHHHcCceEEEEcCCC---CCCCCCCccCCChhhhHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPS--------------MVNLAVALQNEGISAFRFDFAG---NGESEGSFQYGNYWREADDLRA 144 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~--------------~~~~~~~l~~~G~~v~~~d~~g---~G~s~~~~~~~~~~~~~~d~~~ 144 (318)
+...+|++||.|.-....+ --++++.-.+.||.|++.+.-- +-++...+ ......-++.+.-
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np-~kyirt~veh~~y 178 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNP-QKYIRTPVEHAKY 178 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCc-chhccchHHHHHH
Confidence 5668999999884432101 1234555566799999998641 11111111 1111122333333
Q ss_pred HHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC---ccEEEEeccC
Q 021050 145 VVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGR 188 (318)
Q Consensus 145 ~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~ 188 (318)
+-.++... ....+.++.||+||...+.+..+.|+ |.++.+.+++
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 33333222 56789999999999999999999987 6666666654
No 196
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.55 E-value=0.00023 Score=62.08 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=61.0
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc--cCCChhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhh
Q 021050 99 PSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
+.|..+++.|++.||. -.|+.|...--+.. .....+.+...+...|+.+... +.++++|+||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4679999999999996 34444332221111 0112245567788888877655 46799999999999999987763
Q ss_pred c-----------CC-----ccEEEEeccCcc
Q 021050 176 Y-----------ND-----IRTFVNVSGRYD 190 (318)
Q Consensus 176 ~-----------p~-----v~~~v~~~~~~~ 190 (318)
. ++ |++.|.+++++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 2 11 899999988653
No 197
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.54 E-value=0.0028 Score=49.31 Aligned_cols=102 Identities=13% Similarity=0.034 Sum_probs=64.1
Q ss_pred EecCCCCeEEEEEccCCCCC-CChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhh----HHHHHHHHHHHHh
Q 021050 77 LHDAESSEIVVLCHGFRSTK-DDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWRE----ADDLRAVVQYFCG 151 (318)
Q Consensus 77 ~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~----~~d~~~~i~~l~~ 151 (318)
..++.+..+|=|+-|..-.. -.-.|+.+.+.|+++||.|++.-|.- | .+.... ......+++.+..
T Consensus 11 l~P~~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~ 81 (250)
T PF07082_consen 11 LIPPRPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQK 81 (250)
T ss_pred EeCCCCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666643222 22468899999999999999988751 1 111222 2333444444444
Q ss_pred CC-----CCcEEEEEEechHHHHHHHHhhcCC-ccEEEEecc
Q 021050 152 AN-----RAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 187 (318)
Q Consensus 152 ~~-----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 187 (318)
.. .-+++-+|||+|+-+-+.+...++. -++-++++-
T Consensus 82 ~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 82 RGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred hcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 31 1367889999999999888877654 566666653
No 198
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.43 E-value=0.0008 Score=60.51 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=65.2
Q ss_pred CeEEEEEccCCCCCCC-hh--HHHHHHHHHHcCceEEEEcCCC----CCCCC--CCccCCChhhhHHHHHHHHHHHHhC-
Q 021050 83 SEIVVLCHGFRSTKDD-PS--MVNLAVALQNEGISAFRFDFAG----NGESE--GSFQYGNYWREADDLRAVVQYFCGA- 152 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~-~~--~~~~~~~l~~~G~~v~~~d~~g----~G~s~--~~~~~~~~~~~~~d~~~~i~~l~~~- 152 (318)
-|++|++||++-...+ .. .......+..+..-|+.++||- +.... ..+.... ..|...+++|++..
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g----l~Dq~~AL~wv~~~I 187 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG----LFDQLLALRWVKDNI 187 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc----HHHHHHHHHHHHHHH
Confidence 6999999998754432 11 1222333344457788888882 21111 1112222 34777888888776
Q ss_pred -----CCCcEEEEEEechHHHHHHHHhhcC--C-ccEEEEeccCccc
Q 021050 153 -----NRAVGAILGHSKGGSVVLLYASKYN--D-IRTFVNVSGRYDL 191 (318)
Q Consensus 153 -----~~~~i~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~~~ 191 (318)
++++|.|+|||.||..+..+...-. . +..+|.+++....
T Consensus 188 ~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 188 PSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred HhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 6789999999999999877655321 1 6666767665433
No 199
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.40 E-value=0.01 Score=50.89 Aligned_cols=103 Identities=16% Similarity=0.170 Sum_probs=67.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHH-------------------HHHcCceEEEEc-CCCCCCCCC--CccCCChhhhH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVA-------------------LQNEGISAFRFD-FAGNGESEG--SFQYGNYWREA 139 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~-------------------l~~~G~~v~~~d-~~g~G~s~~--~~~~~~~~~~~ 139 (318)
++|+++++.|++|.+ ..+-.+.+. +.+. -.++-+| .-|.|.|.. .....++....
T Consensus 100 ~rPvi~wlNGGPGcS--S~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 100 NRPVIFWLNGGPGCS--SVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCceEEEecCCCChH--hhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccc
Confidence 689999999999887 344444221 1111 3578888 558888874 33344556667
Q ss_pred HHHHHHHHHHHhC------CCCcEEEEEEechHHHHHHHHhhcCC----ccEEEEecc
Q 021050 140 DDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSG 187 (318)
Q Consensus 140 ~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~ 187 (318)
+|+..+.+.+... ...+.+|+|.|+||..+..+|...-+ .++++++++
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 7777777665544 23479999999999988887765422 455555544
No 200
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.35 E-value=0.0017 Score=46.97 Aligned_cols=54 Identities=20% Similarity=0.268 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCcccc
Q 021050 139 ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 192 (318)
Q Consensus 139 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 192 (318)
++--.+.-+|+.+. -+.+..+-|.||||+.|..+.-++|+ ..++|.+++..+..
T Consensus 84 ~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar 139 (227)
T COG4947 84 AERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHH
Confidence 33334444555444 33457888999999999999999999 89999999977654
No 201
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.31 E-value=0.014 Score=43.60 Aligned_cols=107 Identities=22% Similarity=0.150 Sum_probs=62.7
Q ss_pred CCeEEEEEccCCCCCCChh---H---HHHHHHHH----H--cCceEEEEcCCCCCCCC-CCc--cCCC-hhhhHHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPS---M---VNLAVALQ----N--EGISAFRFDFAGNGESE-GSF--QYGN-YWREADDLRAV 145 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~---~---~~~~~~l~----~--~G~~v~~~d~~g~G~s~-~~~--~~~~-~~~~~~d~~~~ 145 (318)
...+.++++|.+.+..... . ..+.+.+. . .+-.+.++-+.||-.-. ... .... -..-+.++..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 5678999999987765311 1 11222111 1 12345555555443221 111 1111 13335677777
Q ss_pred HHHHHhC--CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccC
Q 021050 146 VQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGR 188 (318)
Q Consensus 146 i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~ 188 (318)
++-|+.. +..++.++|||+|+.++-.++...+. ++.+|+++++
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 7777655 35589999999999999998777343 8888888764
No 202
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.27 E-value=0.00083 Score=49.30 Aligned_cols=54 Identities=13% Similarity=0.023 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-----ccEEEEeccCccc
Q 021050 138 EADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-----IRTFVNVSGRYDL 191 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~ 191 (318)
....+...++..... +..+++++|||+||.+|..++..... +..++.++++...
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 344555555554432 56789999999999999998887632 5667777765443
No 203
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.25 E-value=0.00064 Score=40.96 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=25.1
Q ss_pred ceeEEEEeCCCCcEEEEEEecCC--------CCeEEEEEccCCCCCCC
Q 021050 59 KQQELVIPNKYGERLVGVLHDAE--------SSEIVVLCHGFRSTKDD 98 (318)
Q Consensus 59 ~~~~v~~~~~~g~~l~~~~~~~~--------~~~~vv~~hG~~~~~~~ 98 (318)
+.|+..+.+.||..|..+..+.+ ++|+|++.||+.++++.
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 44889999999999997766543 48999999999998854
No 204
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.23 E-value=0.024 Score=44.77 Aligned_cols=39 Identities=33% Similarity=0.389 Sum_probs=34.4
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEeccCccc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL 191 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 191 (318)
+.++..|+|||+||.+++.....+|+ +...+++||....
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 55678999999999999999999998 9999999986543
No 205
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.22 E-value=0.0011 Score=57.18 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=64.3
Q ss_pred CCeEEEEEccCCCCCCC-----hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC----
Q 021050 82 SSEIVVLCHGFRSTKDD-----PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---- 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---- 152 (318)
++-.|+-+||+|.-+.+ .+.+.+++.| |+.|+.+||.-. ++..+....+.+.-+.-|+..+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLA-------PEaPFPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLA-------PEAPFPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccC-------CCCCCCcHHHHHHHHHHHHhcCHHHh
Confidence 45578889999844422 2334444433 799999999632 2233444566676666777665
Q ss_pred --CCCcEEEEEEechHHHHHHHHhhc----CC-ccEEEEeccCc
Q 021050 153 --NRAVGAILGHSKGGSVVLLYASKY----ND-IRTFVNVSGRY 189 (318)
Q Consensus 153 --~~~~i~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~ 189 (318)
-.+||+++|.|.||.+.+-.|.+. -+ .+|+++..++.
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 357999999999999865555443 23 67888876643
No 206
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.21 E-value=0.0013 Score=53.66 Aligned_cols=142 Identities=15% Similarity=0.103 Sum_probs=82.6
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCCccEEEEeccCc-cccchhhhhhhHHHHHHHhccCCccccCCCCcceeeechHHH
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRY-DLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 231 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
..+.+++-|-|--|+.++..|...|+|.++|....-. +....+ ..+...--..+... ......+.+
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L---------~hiyrsYGgnwpi~----l~pyyaegi 298 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQL---------LHIYRSYGGNWPIK----LAPYYAEGI 298 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHH---------HHHHHhhCCCCCcc----cchhHhhhH
Confidence 5678999999999999999999999988777443211 111110 00000000000000 000011111
Q ss_pred HHhhccCh----------HHHh---hhccCCCcEEEEEcCCCCccCcchhHHHHhhCCCC-EEEEECCCCccCCCChHHH
Q 021050 232 MDRLNTNM----------HDAC---LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH-KLHVVEGANHGYTNHQAEL 297 (318)
Q Consensus 232 ~~~~~~~~----------~~~~---~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~ 297 (318)
.+++..+. .... -..++..|-.++.|+.|.+.+++.+.-.++.+|+. .+.++|+..|... +..+
T Consensus 299 ~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~--n~~i 376 (507)
T COG4287 299 DERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI--NQFI 376 (507)
T ss_pred HHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh--HHHH
Confidence 11111111 1111 11255789999999999999999999999999974 5788999999964 2344
Q ss_pred HHHHHHHHHhhc
Q 021050 298 VSVVLDFVKASL 309 (318)
Q Consensus 298 ~~~i~~fl~~~~ 309 (318)
.+.+..|+.+..
T Consensus 377 ~esl~~flnrfq 388 (507)
T COG4287 377 KESLEPFLNRFQ 388 (507)
T ss_pred HHHHHHHHHHHh
Confidence 555666666543
No 207
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.03 E-value=0.0021 Score=54.37 Aligned_cols=85 Identities=19% Similarity=0.193 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHcCce------EEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHH
Q 021050 99 PSMVNLAVALQNEGIS------AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLL 171 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~------v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~ 171 (318)
++|..+.+.|..-||. -..+|+|- |-. .....++....+...|+...+. +.+|++|++||||+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~--~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYH--NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccC--ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 4789999999988886 35567762 111 1112345567777777776665 4589999999999999999
Q ss_pred HHhhcCC---------ccEEEEeccC
Q 021050 172 YASKYND---------IRTFVNVSGR 188 (318)
Q Consensus 172 ~a~~~p~---------v~~~v~~~~~ 188 (318)
+....+. |++.+.++++
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCch
Confidence 8887654 5555555553
No 208
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.92 E-value=0.0026 Score=49.63 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=31.9
Q ss_pred HHHHHhCCCCcEEEEEEechHHHHHHHHhhcC-----CccEEEEeccCc
Q 021050 146 VQYFCGANRAVGAILGHSKGGSVVLLYASKYN-----DIRTFVNVSGRY 189 (318)
Q Consensus 146 i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~ 189 (318)
++.+......++.+.|||.||++|..+|...+ .|..+...++|-
T Consensus 75 l~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 75 LKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 33333333446999999999999999988853 278888777753
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.90 E-value=0.0028 Score=48.27 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=47.2
Q ss_pred HHHHHHHcCceEEEEcCCCCCCCCC-----CccCCChhhhHHHHHHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhc
Q 021050 104 LAVALQNEGISAFRFDFAGNGESEG-----SFQYGNYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 104 ~~~~l~~~G~~v~~~d~~g~G~s~~-----~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+..+... .+|++|-||=...... ......+.....|+.++.++..++ +..+++|+|||.|+.+..++..+.
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34444444 6899998884321111 111112233357888888776665 456899999999999999998875
No 210
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.81 E-value=0.0024 Score=46.01 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhc
Q 021050 141 DLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 141 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+.+.+..+.++ ...++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 344444433333 446899999999999999888764
No 211
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.61 E-value=0.2 Score=43.15 Aligned_cols=102 Identities=15% Similarity=0.105 Sum_probs=58.7
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEE-cCCCCCCCCCCccCCChhh-hHHHHHHHHHHHHhCCCCcEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRF-DFAGNGESEGSFQYGNYWR-EADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~-d~~g~G~s~~~~~~~~~~~-~~~d~~~~i~~l~~~~~~~i~l 159 (318)
+.|..|++.|+-. ++......+++.| |...+.+ |.|--|.+--... ..+++ ..+-+...+++|.= +...++|
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs-~eyE~~I~~~I~~~L~~LgF-~~~qLIL 361 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGS-DEYEQGIINVIQEKLDYLGF-DHDQLIL 361 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCc-HHHHHHHHHHHHHHHHHhCC-CHHHeee
Confidence 6789999999876 3322334455554 4554444 6665544321111 11221 13334444555521 3457999
Q ss_pred EEEechHHHHHHHHhhcCCccEEEEeccCcc
Q 021050 160 LGHSKGGSVVLLYASKYNDIRTFVNVSGRYD 190 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 190 (318)
.|.|||..-|+.+++... ..++|+--|..+
T Consensus 362 SGlSMGTfgAlYYga~l~-P~AIiVgKPL~N 391 (511)
T TIGR03712 362 SGLSMGTFGALYYGAKLS-PHAIIVGKPLVN 391 (511)
T ss_pred ccccccchhhhhhcccCC-CceEEEcCcccc
Confidence 999999999999998753 355554444433
No 212
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.59 E-value=0.011 Score=44.55 Aligned_cols=103 Identities=17% Similarity=0.117 Sum_probs=53.6
Q ss_pred EEEEEccCCCCCCC-hhHHHHHHHHHHc-C---ceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEE
Q 021050 85 IVVLCHGFRSTKDD-PSMVNLAVALQNE-G---ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGA 158 (318)
Q Consensus 85 ~vv~~hG~~~~~~~-~~~~~~~~~l~~~-G---~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~ 158 (318)
-||+..|.+..... ..-..+.+.+.+. | ..+..++||-..... ....+...-..++...++....+ +..+++
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kiv 84 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIV 84 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 45666665543321 2233444455432 3 445567777422111 00012223345555555554444 556899
Q ss_pred EEEEechHHHHHHHHhh--cC----C-ccEEEEeccCc
Q 021050 159 ILGHSKGGSVVLLYASK--YN----D-IRTFVNVSGRY 189 (318)
Q Consensus 159 l~G~S~Gg~~a~~~a~~--~p----~-v~~~v~~~~~~ 189 (318)
|+|+|.|+.++..++.. .+ + |.++++++-+.
T Consensus 85 l~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 85 LAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp EEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred EEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 99999999999998877 22 1 88888887654
No 213
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.57 E-value=0.005 Score=48.57 Aligned_cols=38 Identities=18% Similarity=0.162 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhc
Q 021050 139 ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 139 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..++...+..+..+ +..++++.|||+||.+|..++...
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 34444555444433 456899999999999999888764
No 214
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.49 E-value=0.2 Score=41.73 Aligned_cols=225 Identities=11% Similarity=0.112 Sum_probs=115.8
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCCChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
+...+||++=||.+..+ .........+.+.||.++.+-.|-+-...... ...+......-+..++.-.. .+..++++
T Consensus 36 ~s~k~Iv~~~gWag~~~-r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~-~~~~pi~f 113 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAID-RNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYN-SDPCPIIF 113 (350)
T ss_pred CccccEEEEeeeccccc-hhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhcc-CCcCceEE
Confidence 34435555566666655 35677778888889999998888543222211 11121122233333333322 24567888
Q ss_pred EEEechHHHHHHHH---hh-c-CC----ccEEEEeccCccccchhhh------hhhHHHHHHHhccCCcccc----CC--
Q 021050 160 LGHSKGGSVVLLYA---SK-Y-ND----IRTFVNVSGRYDLKGGIED------RLGKDYMEKIMQDGFIDVK----NK-- 218 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a---~~-~-p~----v~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~-- 218 (318)
--+|+||...+... .. + |. ..+++..+.+......... .........+....+.... ..
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 193 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEG 193 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeeccc
Confidence 89999998765433 22 2 33 5557766654432111000 0001111111111110000 00
Q ss_pred ----CCcceee---echHHHHHhhccChHHHhhhccCCCcEEEEEcCCCCccCcchhHHHHhhCC----CCEEEEECCCC
Q 021050 219 ----TGDVEYR---VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGAN 287 (318)
Q Consensus 219 ----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~g 287 (318)
....... .....+.+++..+. .....+.+.+.+..|.++|.+..+++.+... +++.+-+.++-
T Consensus 194 ~~~~~~~~~~~~~~~r~~~~~~r~~~~~------~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~ 267 (350)
T KOG2521|consen 194 GAYLLGPLAEKISMSRKYHFLDRYEEQR------NELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSE 267 (350)
T ss_pred chhhhhhhhhccccccchHHHHHHHhhh------hcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCcc
Confidence 0000000 00011111111111 1225688999999999999988888754432 35556667788
Q ss_pred ccC--CCChHHHHHHHHHHHHhhcCCCC
Q 021050 288 HGY--TNHQAELVSVVLDFVKASLKQDH 313 (318)
Q Consensus 288 H~~--~~~~~~~~~~i~~fl~~~~~~~~ 313 (318)
|.. ...+..+.+...+|++.......
T Consensus 268 H~~h~r~~p~~y~~~~~~Fl~~~~~~~~ 295 (350)
T KOG2521|consen 268 HVAHFRSFPKTYLKKCSEFLRSVISSYN 295 (350)
T ss_pred ceeeeccCcHHHHHHHHHHHHhcccccC
Confidence 884 36788999999999998765443
No 215
>PLN02454 triacylglycerol lipase
Probab=96.13 E-value=0.013 Score=49.49 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHhC-CCC--cEEEEEEechHHHHHHHHhh
Q 021050 138 EADDLRAVVQYFCGA-NRA--VGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~-~~~--~i~l~G~S~Gg~~a~~~a~~ 175 (318)
..+++...++.+.+. ... +|++.|||+||++|+.+|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 445666666666554 222 49999999999999998864
No 216
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.73 E-value=0.02 Score=42.82 Aligned_cols=60 Identities=22% Similarity=0.397 Sum_probs=45.9
Q ss_pred CCcEEEEEcCCCCccCcchhHHHHhhC---CC--CEEEEECCCCccC-CC---ChHHHHHHHHHHHHhh
Q 021050 249 ECSVLTIHGSSDKIIPLQDAHEFDKII---PN--HKLHVVEGANHGY-TN---HQAELVSVVLDFVKAS 308 (318)
Q Consensus 249 ~~P~lii~g~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~gH~~-~~---~~~~~~~~i~~fl~~~ 308 (318)
++++|-|-|+.|.++.+.+.....+.+ |. ...++.+|+||+- +. ..+++...|.+||.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 567888999999999988876655554 42 5677889999994 32 3478899999998763
No 217
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.57 E-value=0.036 Score=39.85 Aligned_cols=78 Identities=13% Similarity=0.215 Sum_probs=47.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCce-EEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS-AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
+...||++-|+|...+ ....+. ....+. ++++||.... .++ |+. ..+.+.+|
T Consensus 10 gd~LIvyFaGwgtpps--~v~HLi---lpeN~dl~lcYDY~dl~--------ldf-----Dfs---------Ay~hirlv 62 (214)
T COG2830 10 GDHLIVYFAGWGTPPS--AVNHLI---LPENHDLLLCYDYQDLN--------LDF-----DFS---------AYRHIRLV 62 (214)
T ss_pred CCEEEEEEecCCCCHH--HHhhcc---CCCCCcEEEEeehhhcC--------ccc-----chh---------hhhhhhhh
Confidence 3448999999998773 233322 333454 5678887321 111 111 22347899
Q ss_pred EEechHHHHHHHHhhcCCccEEEEecc
Q 021050 161 GHSKGGSVVLLYASKYNDIRTFVNVSG 187 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 187 (318)
.+|||-.+|-++....+ ++..+.+++
T Consensus 63 AwSMGVwvAeR~lqg~~-lksatAiNG 88 (214)
T COG2830 63 AWSMGVWVAERVLQGIR-LKSATAING 88 (214)
T ss_pred hhhHHHHHHHHHHhhcc-ccceeeecC
Confidence 99999999998776554 566666665
No 218
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.53 E-value=0.25 Score=43.49 Aligned_cols=60 Identities=20% Similarity=0.365 Sum_probs=46.6
Q ss_pred CCcEEEEEcCCCCccCcchhHHHHhh----CCC--------CEEEEECCCCccCC---CChHHHHHHHHHHHHhh
Q 021050 249 ECSVLTIHGSSDKIIPLQDAHEFDKI----IPN--------HKLHVVEGANHGYT---NHQAELVSVVLDFVKAS 308 (318)
Q Consensus 249 ~~P~lii~g~~D~~~~~~~~~~~~~~----~~~--------~~~~~~~~~gH~~~---~~~~~~~~~i~~fl~~~ 308 (318)
.-++++.||..|+.+++..+..++++ ... .++..+||.+|+.- ..+-+....+.+|+++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 46899999999999999887666554 221 47889999999963 23457889999999853
No 219
>PLN02310 triacylglycerol lipase
Probab=95.44 E-value=0.023 Score=47.96 Aligned_cols=37 Identities=27% Similarity=0.564 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhh
Q 021050 139 ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 139 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
...+..+++..... ...+|.+.|||+||++|..+|..
T Consensus 192 l~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 192 MQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34444455443222 23479999999999999988854
No 220
>PLN02162 triacylglycerol lipase
Probab=95.44 E-value=0.057 Score=46.30 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=19.1
Q ss_pred CCCcEEEEEEechHHHHHHHHh
Q 021050 153 NRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
+..++++.|||+||++|..+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 4568999999999999998765
No 221
>PLN00413 triacylglycerol lipase
Probab=95.27 E-value=0.028 Score=48.23 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=19.4
Q ss_pred CCCcEEEEEEechHHHHHHHHh
Q 021050 153 NRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
+..++++.|||+||++|..+|.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 5568999999999999999875
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.19 E-value=0.037 Score=46.25 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=48.3
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCC-CCCCCCccCCChhhhHHHHHHHHHHHHhCCCCc
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGN-GESEGSFQYGNYWREADDLRAVVQYFCGANRAV 156 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g~-G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 156 (318)
.++.-.||+.||+-+ .+..+|...+...... +..++...+.+. ..+.......+ ...++++.+.+.+. ..++
T Consensus 77 ~k~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG-~Rla~~~~e~~~~~---si~k 151 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLG-ERLAEEVKETLYDY---SIEK 151 (405)
T ss_pred cCCceEEEecccccc-ccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeee-cccHHHHhhhhhcc---ccce
Confidence 345678999999988 2213455555555544 332333333321 11111001111 22244444443333 5688
Q ss_pred EEEEEEechHHHHHHHHhh
Q 021050 157 GAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~ 175 (318)
|-.+|||+||.++..+...
T Consensus 152 ISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred eeeeeeecCCeeeeEEEEe
Confidence 9999999999987665443
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.08 E-value=0.032 Score=48.40 Aligned_cols=37 Identities=30% Similarity=0.535 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEEEechHHHHHHHHhh
Q 021050 139 ADDLRAVVQYFCGAN-RAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 139 ~~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
.+++..+++.....+ ..+|.+.|||+||.+|...|..
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345555555443221 2369999999999999988854
No 224
>PLN02571 triacylglycerol lipase
Probab=95.02 E-value=0.052 Score=46.06 Aligned_cols=20 Identities=35% Similarity=0.395 Sum_probs=18.1
Q ss_pred cEEEEEEechHHHHHHHHhh
Q 021050 156 VGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~~a~~ 175 (318)
+|++.|||+||.+|..+|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 68999999999999998875
No 225
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.90 E-value=0.13 Score=49.20 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=63.0
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCC-CccCCChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEG-SFQYGNYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~-~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
...|++.|+|..-+.. ..+..++..| ..|.||.--. ..+..+++..+.....-++.+. +..+..+
T Consensus 2121 se~~~~Ffv~pIEG~t--t~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ--P~GPYrl 2186 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFT--TALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ--PEGPYRL 2186 (2376)
T ss_pred ccCCceEEEeccccch--HHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC--CCCCeee
Confidence 4678999999998876 3455555444 3345554332 2233455555544444444432 4457899
Q ss_pred EEEechHHHHHHHHhhcCC---ccEEEEeccCcc
Q 021050 160 LGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 190 (318)
Q Consensus 160 ~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 190 (318)
+|+|+|+.++..+|....+ ...+|++++...
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999999887644 677888887653
No 226
>PLN02934 triacylglycerol lipase
Probab=94.75 E-value=0.044 Score=47.46 Aligned_cols=34 Identities=24% Similarity=0.453 Sum_probs=24.1
Q ss_pred HHHHHHHHHhC-CCCcEEEEEEechHHHHHHHHhh
Q 021050 142 LRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 142 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
+...++.+.++ +..++++.|||+||++|..+|..
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 44444443333 45689999999999999998753
No 227
>PLN02408 phospholipase A1
Probab=94.74 E-value=0.053 Score=45.33 Aligned_cols=21 Identities=33% Similarity=0.347 Sum_probs=18.6
Q ss_pred cEEEEEEechHHHHHHHHhhc
Q 021050 156 VGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
+|.+.|||+||.+|..+|...
T Consensus 201 sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 599999999999999988764
No 228
>PLN02324 triacylglycerol lipase
Probab=94.59 E-value=0.075 Score=45.06 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhC-C--CCcEEEEEEechHHHHHHHHhh
Q 021050 140 DDLRAVVQYFCGA-N--RAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 140 ~d~~~~i~~l~~~-~--~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
+.+.+.+..+... . ..+|.+.|||+||++|..+|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3444444444433 2 2369999999999999998864
No 229
>PLN02847 triacylglycerol lipase
Probab=94.35 E-value=0.32 Score=43.22 Aligned_cols=23 Identities=30% Similarity=0.313 Sum_probs=19.5
Q ss_pred CCCcEEEEEEechHHHHHHHHhh
Q 021050 153 NRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
+.-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 44589999999999999887765
No 230
>PLN02719 triacylglycerol lipase
Probab=94.08 E-value=0.11 Score=45.21 Aligned_cols=21 Identities=33% Similarity=0.469 Sum_probs=18.4
Q ss_pred CcEEEEEEechHHHHHHHHhh
Q 021050 155 AVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
.+|.+.|||+||.+|..+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999998854
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.88 E-value=0.18 Score=41.95 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=30.7
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCC------ccEEEEeccCcccc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYND------IRTFVNVSGRYDLK 192 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~------v~~~v~~~~~~~~~ 192 (318)
+..++.|+|||+|+.+.+..+....+ |..+++++++....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 55679999999999998776554322 78999998876654
No 232
>PLN02753 triacylglycerol lipase
Probab=93.86 E-value=0.13 Score=44.91 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=18.6
Q ss_pred CcEEEEEEechHHHHHHHHhh
Q 021050 155 AVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
.+|.+.|||+||.+|..+|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 479999999999999998853
No 233
>PLN02761 lipase class 3 family protein
Probab=93.70 E-value=0.1 Score=45.43 Aligned_cols=21 Identities=33% Similarity=0.396 Sum_probs=18.3
Q ss_pred CcEEEEEEechHHHHHHHHhh
Q 021050 155 AVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 155 ~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
.+|.+.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999988853
No 234
>PLN02802 triacylglycerol lipase
Probab=93.69 E-value=0.11 Score=45.24 Aligned_cols=21 Identities=33% Similarity=0.488 Sum_probs=18.6
Q ss_pred cEEEEEEechHHHHHHHHhhc
Q 021050 156 VGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 156 ~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
+|++.|||+||.+|..+|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 331 SITVTGHSLGAALALLVADEL 351 (509)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 689999999999999887754
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.66 E-value=0.44 Score=37.32 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=44.6
Q ss_pred CceEEEEcCCCC-CCCCC---CccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc---C----Ccc
Q 021050 112 GISAFRFDFAGN-GESEG---SFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY---N----DIR 180 (318)
Q Consensus 112 G~~v~~~d~~g~-G~s~~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p----~v~ 180 (318)
|+.+..++||.. +--.+ .....+...-++.+.++++.... ..++++++|+|+|+.++..++.+. + +.-
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l 80 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDL 80 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCce
Confidence 677888888861 11111 11112222223334444433211 456799999999999998877664 1 133
Q ss_pred EEEEeccCccccch
Q 021050 181 TFVNVSGRYDLKGG 194 (318)
Q Consensus 181 ~~v~~~~~~~~~~~ 194 (318)
.+|+++-+......
T Consensus 81 ~fVl~gnP~rp~GG 94 (225)
T PF08237_consen 81 SFVLIGNPRRPNGG 94 (225)
T ss_pred EEEEecCCCCCCCc
Confidence 56666554443333
No 236
>PF03283 PAE: Pectinacetylesterase
Probab=93.51 E-value=1.8 Score=36.66 Aligned_cols=37 Identities=30% Similarity=0.249 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhh
Q 021050 139 ADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 139 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
..-+.+++++|..+ ..++++|.|.|.||.-++..+..
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 45677888888766 45789999999999988775543
No 237
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=93.29 E-value=1.2 Score=33.04 Aligned_cols=47 Identities=15% Similarity=0.204 Sum_probs=37.9
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC--CCCCC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG--NGESE 127 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g--~G~s~ 127 (318)
+.++.+|++-|+.++.-+.....+.+.|.+.|++++..|=-. ||.+.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~ 68 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNR 68 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccC
Confidence 467899999999998876677889999999999999998432 44443
No 238
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.04 E-value=0.13 Score=42.99 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 139 ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 139 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+++..+++.. +.-++.+.|||+||.+|..+|...
T Consensus 158 ~~~~~~L~~~~---~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 158 DAELRRLIELY---PNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHhc---CCcEEEEecCChHHHHHHHHHHHH
Confidence 34444444433 445799999999999999888753
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.96 E-value=0.27 Score=43.28 Aligned_cols=81 Identities=20% Similarity=0.276 Sum_probs=53.4
Q ss_pred HHcCceEEEEcCCCCCCCCC--CccC-CChhhh-------HHHH----HHHHHHHHhCCCCcEEEEEEechHHHHHHHHh
Q 021050 109 QNEGISAFRFDFAGNGESEG--SFQY-GNYWRE-------ADDL----RAVVQYFCGANRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 109 ~~~G~~v~~~d~~g~G~s~~--~~~~-~~~~~~-------~~d~----~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
..+||.++.=|- ||..+.. .... .+.+.. ..++ .++++..-.+.+++-...|.|.||..++..|.
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 457899999995 6755532 1111 121111 1122 23333333336677899999999999999999
Q ss_pred hcCC-ccEEEEeccCcc
Q 021050 175 KYND-IRTFVNVSGRYD 190 (318)
Q Consensus 175 ~~p~-v~~~v~~~~~~~ 190 (318)
++|+ .+|+|.-+|..+
T Consensus 135 ryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAIN 151 (474)
T ss_pred hChhhcCeEEeCCchHH
Confidence 9999 999999988643
No 240
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=91.95 E-value=1.6 Score=35.59 Aligned_cols=93 Identities=18% Similarity=0.340 Sum_probs=55.6
Q ss_pred eEEEEEccCCCCCCChh----HHHHHHHH-HHcCceEEEEcCCCCCCC--------CCCcc---CCCh-hhhHHHHHHHH
Q 021050 84 EIVVLCHGFRSTKDDPS----MVNLAVAL-QNEGISAFRFDFAGNGES--------EGSFQ---YGNY-WREADDLRAVV 146 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~----~~~~~~~l-~~~G~~v~~~d~~g~G~s--------~~~~~---~~~~-~~~~~d~~~~i 146 (318)
..|||+=|.+.+..... ...+.+.+ ...+-..+++=.+|.|.. ..... ...+ ....+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 56788888876664311 23444555 222335556666787771 11100 0011 22345666666
Q ss_pred HHHHhC--CCCcEEEEEEechHHHHHHHHhhc
Q 021050 147 QYFCGA--NRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 147 ~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.++... ..++|.++|+|-|++.|-.+|..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 666554 567899999999999999988664
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.49 E-value=0.28 Score=39.05 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=24.5
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCCccEEEEecc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSG 187 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 187 (318)
+..++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 4568999999999999999877653 333333333
No 242
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.49 E-value=0.28 Score=39.05 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=24.5
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCCccEEEEecc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSG 187 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 187 (318)
+..++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 4568999999999999999877653 333333333
No 243
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=90.06 E-value=2.4 Score=29.70 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=26.6
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCc
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI 113 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~ 113 (318)
.+++|.|+-+||+.|.+-++..+.+++.|-..|.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 4578999999999999866666778888766654
No 244
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=89.67 E-value=2.9 Score=27.97 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCCh-hhhHHHHHHHHHHHHhCCCCcEEEEEEechHHH--HHHHHhhc
Q 021050 100 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY-WREADDLRAVVQYFCGANRAVGAILGHSKGGSV--VLLYASKY 176 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~-~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~--a~~~a~~~ 176 (318)
.+..+.+.+..+|+..=.+.++.+|.+....-...- ..-..-+..+++.. +..+++++|-|--.=. -..+|.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f---P~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF---PERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC---CCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 466777888888888777888877655432211111 12244555555554 6778999999966543 34467778
Q ss_pred CC-ccEEE
Q 021050 177 ND-IRTFV 183 (318)
Q Consensus 177 p~-v~~~v 183 (318)
|+ |.++.
T Consensus 89 P~~i~ai~ 96 (100)
T PF09949_consen 89 PGRILAIY 96 (100)
T ss_pred CCCEEEEE
Confidence 88 66654
No 245
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=89.25 E-value=0.79 Score=31.40 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=16.6
Q ss_pred CCcEEEEEEecC--CCCeEEEEEccCCCCC
Q 021050 69 YGERLVGVLHDA--ESSEIVVLCHGFRSTK 96 (318)
Q Consensus 69 ~g~~l~~~~~~~--~~~~~vv~~hG~~~~~ 96 (318)
+|..|+.....+ .+..++|++||++++-
T Consensus 76 ~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 76 DGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp TTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred eeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 688888765543 3567899999999987
No 246
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.79 E-value=1.8 Score=38.58 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhC---CCCcEEEEEEechHHHHHHHHhh-----cCC-------ccEEEEeccC
Q 021050 139 ADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASK-----YND-------IRTFVNVSGR 188 (318)
Q Consensus 139 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~-----~p~-------v~~~v~~~~~ 188 (318)
+.-...+++.+... +..+|+.+||||||.++=.+... .|+ -+|+|.++.+
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33444555555554 35689999999999887655433 233 4677777655
No 247
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=88.31 E-value=12 Score=30.23 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=61.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC------CCCCC-----------------CCcc--CCChh
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG------NGESE-----------------GSFQ--YGNYW 136 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g------~G~s~-----------------~~~~--~~~~~ 136 (318)
.+|+++++-|..|++-..+.+.+..++...+...+++++-- ++..- ++.. ..++.
T Consensus 17 ~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~TsLN 96 (366)
T KOG1532|consen 17 QRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTSLN 96 (366)
T ss_pred cCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhhHH
Confidence 67888888898888766678889899988766666555421 11110 1110 11222
Q ss_pred hhHHHHHHHHHHHHhC----------CCCcEEEEEEechHHHHHH-HHhhcCCccEEEEeccC
Q 021050 137 READDLRAVVQYFCGA----------NRAVGAILGHSKGGSVVLL-YASKYNDIRTFVNVSGR 188 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~----------~~~~i~l~G~S~Gg~~a~~-~a~~~p~v~~~v~~~~~ 188 (318)
.++.-+..+++.+.+. -+..|-++-||..|.+... +|..+|.|-.-|.-.+.
T Consensus 97 LF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~r 159 (366)
T KOG1532|consen 97 LFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPTVVVYVVDTPR 159 (366)
T ss_pred HHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCeEEEEEecCCc
Confidence 3333344444444332 2457888999998887766 44555665444444443
No 248
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=87.96 E-value=8.7 Score=31.64 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=61.8
Q ss_pred CCCCeEEEEEccCCCCCCC---hhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCc----------cC-CCh--hhhHHHH
Q 021050 80 AESSEIVVLCHGFRSTKDD---PSMVNLAVALQN-EGISAFRFDFAGNGESEGSF----------QY-GNY--WREADDL 142 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~-~G~~v~~~d~~g~G~s~~~~----------~~-~~~--~~~~~d~ 142 (318)
...+..|+|+-|....-.. .-...+...|.+ .|.+++++=-+|.|.-.-.. .. .+. ......+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 3456788888885433211 123456666665 57888888888887653111 00 000 2234667
Q ss_pred HHHHHHHHhC--CCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+..+|... ..++|+++|+|-|+++|-.+|.-.
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHH
Confidence 7777777665 567899999999999998877653
No 249
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=86.03 E-value=5.7 Score=32.07 Aligned_cols=38 Identities=16% Similarity=0.027 Sum_probs=27.4
Q ss_pred CCCcEEEEEEechHHHHHHHHhhcCC----ccEEEEeccCcc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD 190 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 190 (318)
...|++|.|.|+|++-+...-....+ +++++..+++..
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 34579999999999877654433322 899998887654
No 250
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=84.69 E-value=8.1 Score=29.67 Aligned_cols=62 Identities=16% Similarity=0.259 Sum_probs=43.5
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCc-eEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
...+|++.||...++.. .|..+-..|.+.|| .|++...-|+ -++..++++++..+...+.|+
T Consensus 137 ~e~~vlmgHGt~h~s~~-~YacLd~~~~~~~f~~v~v~~ve~y----------------P~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNA-AYACLDHVLDEYGFDNVFVAAVEGY----------------PLVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHH-HHHHHHHHHHhcCCCceEEEEecCC----------------CcHHHHHHHHHHcCCceEEEe
Confidence 45688999998877753 56666677788888 6666665543 145667888888877776665
No 251
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=84.24 E-value=2.7 Score=36.58 Aligned_cols=104 Identities=14% Similarity=0.101 Sum_probs=56.3
Q ss_pred CCeEEEEEccCCCCCCChhHH-HHHHHHHHcC-ceEEEEcCC----C---CCCCCCCccCCChhhhHHHHHHHHHHHHhC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMV-NLAVALQNEG-ISAFRFDFA----G---NGESEGSFQYGNYWREADDLRAVVQYFCGA 152 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~-~~~~~l~~~G-~~v~~~d~~----g---~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 152 (318)
+..++|++-|+|--+.+.... .=.+.|+..+ .-|+.++|| | .+..+..+...++ -|=.-+++|++++
T Consensus 134 n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl----~DQqLAl~WV~~N 209 (601)
T KOG4389|consen 134 NLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL----LDQQLALQWVQEN 209 (601)
T ss_pred CceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch----HHHHHHHHHHHHh
Confidence 455888899887444321111 1134444442 456667777 1 1122222222232 2333356666665
Q ss_pred ------CCCcEEEEEEechHHHHHHHHhhcCC----ccEEEEeccCcc
Q 021050 153 ------NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD 190 (318)
Q Consensus 153 ------~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 190 (318)
++.++.|+|.|.|+.-...-.. .|. ++..|+-++...
T Consensus 210 i~aFGGnp~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 210 IAAFGGNPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred HHHhCCCcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcCCCC
Confidence 5779999999999985543222 132 677777776554
No 252
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=84.14 E-value=9.4 Score=31.47 Aligned_cols=121 Identities=17% Similarity=0.071 Sum_probs=75.1
Q ss_pred CCcEEEEEEecC-----CCCeEEEEEccCCCCCCCh--hHHHH-----------HHHHHHcCceEEEEcCC-CCCCCCCC
Q 021050 69 YGERLVGVLHDA-----ESSEIVVLCHGFRSTKDDP--SMVNL-----------AVALQNEGISAFRFDFA-GNGESEGS 129 (318)
Q Consensus 69 ~g~~l~~~~~~~-----~~~~~vv~~hG~~~~~~~~--~~~~~-----------~~~l~~~G~~v~~~d~~-g~G~s~~~ 129 (318)
++....++++-. ..+|..+.+.|..+.+..- -++.+ ...|.. -.++.+|-| |.|.|--.
T Consensus 12 ~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVd 89 (414)
T KOG1283|consen 12 TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVD 89 (414)
T ss_pred cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeec
Confidence 444555554421 3578899999987766420 11111 122332 457777766 66766422
Q ss_pred c---cCCChhhhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhhcC------C----ccEEEEeccCccc
Q 021050 130 F---QYGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKYN------D----IRTFVNVSGRYDL 191 (318)
Q Consensus 130 ~---~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~p------~----v~~~v~~~~~~~~ 191 (318)
. ...+..+.+.|+.++++.+-.. ...+++|+..|+||-+|..++.... + +.++++-++...+
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 2 2235567788998888877665 3357999999999999988776541 1 5677776665443
No 253
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.96 E-value=3.6 Score=35.99 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=31.4
Q ss_pred CCCcEEEEEEechHHHHHHHHhhc---CC---ccEEEEeccCccccc
Q 021050 153 NRAVGAILGHSKGGSVVLLYASKY---ND---IRTFVNVSGRYDLKG 193 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~~~---p~---v~~~v~~~~~~~~~~ 193 (318)
+..+|.|+|+|+|+-+.+...... .+ |..+++++.|.....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 778899999999999987544432 22 888999988776543
No 254
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=81.82 E-value=26 Score=30.39 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=64.7
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEE--cCC------------------CCCCCCCC-cc-C------
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRF--DFA------------------GNGESEGS-FQ-Y------ 132 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~~------------------g~G~s~~~-~~-~------ 132 (318)
.+.|.||++-|+-++.-......++.+|.++|+.|..+ |.. -||..... +- .
T Consensus 97 ~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~al~ 176 (451)
T COG0541 97 KKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALE 176 (451)
T ss_pred CCCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHHHH
Confidence 46789999999988775556778999999999887655 321 12221000 00 0
Q ss_pred -----------------CCh-hhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC---ccEEEEe
Q 021050 133 -----------------GNY-WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IRTFVNV 185 (318)
Q Consensus 133 -----------------~~~-~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~ 185 (318)
..+ ....+.+.++-+.+ .+..+.+|--++=|.-|...|..+.+ +.|+|+.
T Consensus 177 ~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~---~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVI---NPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhc---CCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 000 01112222222222 67789999999999999999988876 8888876
No 255
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=80.38 E-value=2.9 Score=30.59 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=30.2
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
++.||++-|..++.-+.....+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 47899999999988555667788888889999999974
No 256
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=75.73 E-value=8.5 Score=24.14 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=31.1
Q ss_pred hhHHHHHHHHHHHHhC----CCCcEEEEEEechHHHHHHHHhhcC
Q 021050 137 READDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
-....+..-+++++.+ +++++-++|-|.|=.+|.+.++.+.
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 3467788888888875 5678999999999999988877753
No 257
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=74.40 E-value=6 Score=29.52 Aligned_cols=35 Identities=26% Similarity=0.257 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
..+++.|.+++...-.+.|.|+|+.++..++...+
T Consensus 14 ~Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34555665556666689999999999999988654
No 258
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=73.23 E-value=61 Score=28.04 Aligned_cols=96 Identities=14% Similarity=0.083 Sum_probs=58.8
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC----------CC-------------hhhhHHHHH
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY----------GN-------------YWREADDLR 143 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~----------~~-------------~~~~~~d~~ 143 (318)
|++=|...++. ..+..+.+.+.+.|..++.+|.-=.|........ .+ ...+.+-+.
T Consensus 4 I~iigT~DTK~-~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 4 IAIIGTLDTKG-EELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEccCCCH-HHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 33445555554 3577788888889999999997655444322110 00 112223334
Q ss_pred HHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEE
Q 021050 144 AVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFV 183 (318)
Q Consensus 144 ~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 183 (318)
.++..+..+ ..+-++-+|-|.|..++..+....|- +-+++
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 444444333 34557888999999999998888876 55544
No 259
>PRK12467 peptide synthase; Provisional
Probab=73.11 E-value=16 Score=41.90 Aligned_cols=87 Identities=17% Similarity=0.081 Sum_probs=59.4
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 162 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 162 (318)
.+.+++.|...+.. ..+..+...+.. +..++.+..++.-... ....++...+....+.+.+... ..+..+.|+
T Consensus 3692 ~~~l~~~h~~~r~~--~~~~~l~~~l~~-~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~--~~p~~l~g~ 3764 (3956)
T PRK12467 3692 FPALFCRHEGLGTV--FDYEPLAVILEG-DRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQA--KGPYGLLGW 3764 (3956)
T ss_pred ccceeeechhhcch--hhhHHHHHHhCC-CCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhcc--CCCeeeeee
Confidence 35699999998887 457777777754 4778888776542222 1223455556666666666543 346899999
Q ss_pred echHHHHHHHHhhc
Q 021050 163 SKGGSVVLLYASKY 176 (318)
Q Consensus 163 S~Gg~~a~~~a~~~ 176 (318)
|+||.++..++...
T Consensus 3765 s~g~~~a~~~~~~l 3778 (3956)
T PRK12467 3765 SLGGTLARLVAELL 3778 (3956)
T ss_pred ecchHHHHHHHHHH
Confidence 99999999887754
No 260
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=72.61 E-value=6.9 Score=29.78 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.+.+.+...-.++|.|.||.++..++...
T Consensus 15 ~Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 15 IGALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3555666555555568999999999999998754
No 261
>PRK10279 hypothetical protein; Provisional
Probab=70.36 E-value=6.5 Score=32.46 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=26.8
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.|.+.+...-.++|.|+|+.++..+|...
T Consensus 21 iGVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 21 IGVINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 3456666666776678999999999999998754
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=70.26 E-value=8 Score=32.08 Aligned_cols=34 Identities=26% Similarity=0.270 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.|.+.+...-.++|.|+|+.++..+|...
T Consensus 31 iGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 31 IGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 3456666666666568999999999999999864
No 263
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=70.20 E-value=9.3 Score=29.96 Aligned_cols=33 Identities=27% Similarity=0.212 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+++.|.+.+...-.++|.|.|+.++..+|...
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 445555555555568999999999999998754
No 264
>PRK09273 hypothetical protein; Provisional
Probab=69.76 E-value=50 Score=25.58 Aligned_cols=79 Identities=9% Similarity=0.066 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC
Q 021050 99 PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 178 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 178 (318)
-.+..+.++|.+.||.|+-+-. + .......+|.+.+.-+...+ .+ +....+|.+...|-.+++ +|.++|.
T Consensus 17 ~i~~~L~~~L~~~G~eV~D~G~--~---~~~~~s~dYpd~a~~vA~~V---~~-g~~d~GIliCGTGiG~si-AANK~pG 86 (211)
T PRK09273 17 IIYEALKKVADPKGHEVFNYGM--Y---DEEDHQLTYVQNGIMASILL---NS-KAVDFVVTGCGTGQGAML-ALNSFPG 86 (211)
T ss_pred HHHHHHHHHHHHCCCEEEEeCC--C---CCCCCCCChHHHHHHHHHHH---Hc-CCCCEEEEEcCcHHHHHH-HHhcCCC
Confidence 4677888999999998854432 1 11111135555444444443 23 333455555555544444 3678888
Q ss_pred ccEEEEecc
Q 021050 179 IRTFVNVSG 187 (318)
Q Consensus 179 v~~~v~~~~ 187 (318)
|.+.+..++
T Consensus 87 Iraalc~d~ 95 (211)
T PRK09273 87 VVCGYCIDP 95 (211)
T ss_pred eEEEEeCCH
Confidence 877776665
No 265
>PRK02399 hypothetical protein; Provisional
Probab=68.91 E-value=77 Score=27.44 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=58.0
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCcc----------CCC-------------hhhhHHHHH
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ----------YGN-------------YWREADDLR 143 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~----------~~~-------------~~~~~~d~~ 143 (318)
|++=|...++. ..+..+.+.+.++|..|+.+|.-..|....... ..+ ...+.+-+.
T Consensus 6 I~iigT~DTK~-~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKG-EELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcH-HHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 55556666664 356677788888899999999844442211100 000 112223333
Q ss_pred HHHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC-ccEEE
Q 021050 144 AVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFV 183 (318)
Q Consensus 144 ~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 183 (318)
.++..|.+. ...-++-+|-|.|..++..+....|- +-+++
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 344433333 35568888999999999998888876 55544
No 266
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=68.85 E-value=61 Score=27.93 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=29.3
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
|+|+|...-.. +..+++.|.++|+.|..+-..+.+..
T Consensus 2 il~~~~~~p~~----~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPGQ----FRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCchh----HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 78888876544 78899999999999988876665443
No 267
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=68.25 E-value=25 Score=27.81 Aligned_cols=40 Identities=20% Similarity=0.096 Sum_probs=28.7
Q ss_pred CCeEEEEEccCCCCCC-ChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKD-DPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+|.|+|++-.....+ ..+...+.+.+.+.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4677999988774422 134566778888889998888765
No 268
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=67.66 E-value=81 Score=27.20 Aligned_cols=39 Identities=13% Similarity=0.230 Sum_probs=27.9
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEE
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRF 118 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~ 118 (318)
...+|.||++-|+-++.-......++-++.++||.+..+
T Consensus 97 ~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~Lv 135 (483)
T KOG0780|consen 97 KKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALV 135 (483)
T ss_pred ccCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEE
Confidence 346788888888776664455777888888888876443
No 269
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=66.39 E-value=20 Score=27.72 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=31.4
Q ss_pred CCCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC
Q 021050 81 ESSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
++++.|.|++-.+.+... .+.....+.|.+.|+.+.-+++-
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 346789999988877652 35667888899999988888764
No 270
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=65.67 E-value=32 Score=28.35 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=25.9
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCc
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI 113 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~ 113 (318)
.+.+|.++=+||+.|++-++..+.+++.+-..|-
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl 139 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGL 139 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHHHHHhccc
Confidence 4578999999999999866566667777765554
No 271
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=65.15 E-value=14 Score=27.62 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
.+++.+.+.+...-.++|.|.|+.++..++...+
T Consensus 17 Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 17 GVLRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3455555555554589999999999999887653
No 272
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=64.85 E-value=52 Score=25.24 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC---C
Q 021050 102 VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN---D 178 (318)
Q Consensus 102 ~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~ 178 (318)
....+.+.++++.++.+|-+|..... ....+++..+++.+ ....++++=-+..+.-.+..+..+- .
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~~d--------~~~~~el~~~~~~~---~~~~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSPRD--------EELLEELKKLLEAL---NPDEVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSSTH--------HHHHHHHHHHHHHH---SSSEEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHHhhcCCCEEEEecCCcchhh--------HHHHHHHHHHhhhc---CCccceEEEecccChHHHHHHHHHhhccc
Confidence 34455566778999999999764222 33356666666666 5556777666666666655444432 2
Q ss_pred ccEEEEe
Q 021050 179 IRTFVNV 185 (318)
Q Consensus 179 v~~~v~~ 185 (318)
+.++|+-
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 7888864
No 273
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=64.48 E-value=9.3 Score=30.80 Aligned_cols=41 Identities=7% Similarity=0.237 Sum_probs=35.0
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+..|+||++.|+.+++-....+.+.+.|..+|++|.++.-|
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 45699999999988875567888999999999999999766
No 274
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=64.23 E-value=0.34 Score=39.55 Aligned_cols=93 Identities=16% Similarity=0.046 Sum_probs=56.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHh-CCCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG-ANRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~-~~~~~i~l~ 160 (318)
.+..++..||...+... ........+...++.++..|+++++.+.+......+..-..++..++.+... ....+++++
T Consensus 87 ~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
T COG1073 87 FGESGGDPRGLADSEGY-AEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVW 165 (299)
T ss_pred ccccccccccccCcccc-ccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccce
Confidence 45668888997555431 2233334445557899999999999987554332222112223333332210 134478999
Q ss_pred EEechHHHHHHHHhh
Q 021050 161 GHSKGGSVVLLYASK 175 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~ 175 (318)
|.|+||..++.....
T Consensus 166 g~s~g~~~~~~~~~~ 180 (299)
T COG1073 166 GESLGGALALLLLGA 180 (299)
T ss_pred eeccCceeecccccc
Confidence 999999999886654
No 275
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=64.10 E-value=15 Score=27.41 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.|.+.+...-.++|.|.|+.++..++...
T Consensus 16 ~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3455556555554458999999999999988654
No 276
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=63.69 E-value=10 Score=31.47 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+++.|.+.+...-++.|.|+|+.++..+|..+
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 355556555777789999999999999999864
No 277
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=63.43 E-value=55 Score=25.16 Aligned_cols=65 Identities=22% Similarity=0.267 Sum_probs=39.7
Q ss_pred CCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHh
Q 021050 82 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG 151 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 151 (318)
..++++++||.....-. ..-..+.+.|.+.|..+...-+++-|-.-. ......+....+++|+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~-----~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG-----NPENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT-----SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC-----CchhHHHHHHHHHHHHHH
Confidence 46889999998765421 345678888888888877777776443211 112223445555666543
No 278
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=62.87 E-value=13 Score=30.12 Aligned_cols=34 Identities=32% Similarity=0.265 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.+.+.+..-=.+.|.|+|+.++..+|...
T Consensus 26 iGVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 26 IGILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 3455666555665558999999999999998764
No 279
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=62.60 E-value=11 Score=31.05 Aligned_cols=31 Identities=23% Similarity=0.268 Sum_probs=23.2
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHh
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
++.+.+...+..+-.++|||+|-+.|+.++.
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 3445555557778899999999998887654
No 280
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=62.49 E-value=14 Score=28.76 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
.+++.|.+.+..--.+.|.|.|+..+..+|...+
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3555555555544589999999999999998765
No 281
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=61.95 E-value=72 Score=24.61 Aligned_cols=71 Identities=15% Similarity=0.053 Sum_probs=43.6
Q ss_pred HHHHHHHcCc-eEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEec----hHHHHHHHHhhcCC
Q 021050 104 LAVALQNEGI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSK----GGSVVLLYASKYND 178 (318)
Q Consensus 104 ~~~~l~~~G~-~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~----Gg~~a~~~a~~~p~ 178 (318)
..+.+...|. +|+..+-+.... .+.+.++.-+.++++.. + ..++++|+|. |..++.++|++..-
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~-------~~~e~~a~al~~~i~~~---~-p~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG-------ADTLATAKALAAAIKKI---G-VDLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC-------CChHHHHHHHHHHHHHh---C-CCEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 3444555666 677777653221 22334444455544433 4 4589999998 88999999988754
Q ss_pred --ccEEEEe
Q 021050 179 --IRTFVNV 185 (318)
Q Consensus 179 --v~~~v~~ 185 (318)
+..++.+
T Consensus 137 ~lvsdv~~l 145 (202)
T cd01714 137 PQITYVSKI 145 (202)
T ss_pred CccceEEEE
Confidence 5555554
No 282
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=61.33 E-value=6.8 Score=32.69 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHh
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
++.+.++..+..+-.++|||+|=+.|+.++.
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHCC
Confidence 4456666667788899999999888876543
No 283
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=61.03 E-value=11 Score=29.72 Aligned_cols=40 Identities=10% Similarity=0.223 Sum_probs=34.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+.|+||++.|+.+.+-......+...|..+|+.|.++..|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4699999999988775567888999998899999998876
No 284
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=60.79 E-value=9.1 Score=34.51 Aligned_cols=33 Identities=21% Similarity=0.125 Sum_probs=27.1
Q ss_pred EEEEEEechHHHHHHHHhhcCC--ccEEEEeccCc
Q 021050 157 GAILGHSKGGSVVLLYASKYND--IRTFVNVSGRY 189 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~ 189 (318)
++-.+.|-||..++.+|.+..+ |++++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 5566899999999998888766 99999887744
No 285
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=60.38 E-value=1e+02 Score=25.93 Aligned_cols=38 Identities=11% Similarity=0.195 Sum_probs=25.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAG 122 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g 122 (318)
.+++=+++||.|.... ...+.+++.++ +..|+.+|.-+
T Consensus 210 ~g~vDi~V~gaGTGGT---itgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 210 DGKVDIFVAGAGTGGT---ITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred cCCCCEEEeccCCCce---eechhHHHHHhCCCCEEEEeCCCc
Confidence 4556677787776552 35566777665 57888888654
No 286
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=60.33 E-value=92 Score=25.86 Aligned_cols=89 Identities=17% Similarity=0.130 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC--CChhhhHHHHHHHHHHHHhCCCCc------EEEEEEec-------
Q 021050 100 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQY--GNYWREADDLRAVVQYFCGANRAV------GAILGHSK------- 164 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~--~~~~~~~~d~~~~i~~l~~~~~~~------i~l~G~S~------- 164 (318)
.-...+..|.+.||.|+++|-.-.|....-... .-+.....|-..+-+.+.+..++- ...||-|+
T Consensus 12 IGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy 91 (329)
T COG1087 12 IGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYY 91 (329)
T ss_pred hHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHH
Confidence 345667788889999999998866655422211 111111333333333343333332 34566663
Q ss_pred ----hHHHHHHHHhhcCCccEEEEeccC
Q 021050 165 ----GGSVVLLYASKYNDIRTFVNVSGR 188 (318)
Q Consensus 165 ----Gg~~a~~~a~~~p~v~~~v~~~~~ 188 (318)
+|.+.+.-+.+.-.|+.+|..|..
T Consensus 92 ~NNv~gTl~Ll~am~~~gv~~~vFSStA 119 (329)
T COG1087 92 DNNVVGTLNLIEAMLQTGVKKFIFSSTA 119 (329)
T ss_pred hhchHhHHHHHHHHHHhCCCEEEEecch
Confidence 566666655555568999887653
No 287
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=60.13 E-value=15 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCCC--cEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRA--VGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~--~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.|.+++.. .-.+.|-|.|+.++..++...
T Consensus 15 ~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 15 LGVLSLLIEAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 3456666666554 347999999999999998865
No 288
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.09 E-value=13 Score=30.57 Aligned_cols=30 Identities=17% Similarity=0.072 Sum_probs=22.3
Q ss_pred HHHHHHhCCCCcEEEEEEechHHHHHHHHh
Q 021050 145 VVQYFCGANRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 145 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
+.+.++..+..+..++|||+|=+.|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 334444557778899999999988887654
No 289
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=58.56 E-value=66 Score=23.14 Aligned_cols=75 Identities=19% Similarity=0.160 Sum_probs=40.6
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCcc
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIR 180 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~ 180 (318)
-..+.++|.+.||.|+-+-... .. ..+|.+.+..+...+. +.. ....|+....|-.+++. |.+.|.|.
T Consensus 14 K~~i~~~L~~~g~eV~D~G~~~-----~~--~~dy~~~a~~va~~V~---~~~-~d~GIliCgtGiG~~ia-ANK~~GIr 81 (140)
T PF02502_consen 14 KEAIKEYLEEKGYEVIDFGTYS-----ED--SVDYPDFAEKVAEAVA---SGE-ADRGILICGTGIGMSIA-ANKVPGIR 81 (140)
T ss_dssp HHHHHHHHHHTTEEEEEESESS-----TS--T--HHHHHHHHHHHHH---TTS-SSEEEEEESSSHHHHHH-HHTSTT--
T ss_pred HHHHHHHHHHCCCEEEEeCCCC-----CC--CCCHHHHHHHHHHHHH---ccc-CCeEEEEcCCChhhhhH-hhcCCCEE
Confidence 4567889999999877654331 11 2355555554444443 333 33455555555544444 77888888
Q ss_pred EEEEecc
Q 021050 181 TFVNVSG 187 (318)
Q Consensus 181 ~~v~~~~ 187 (318)
+.+..++
T Consensus 82 Aa~~~d~ 88 (140)
T PF02502_consen 82 AALCSDP 88 (140)
T ss_dssp EEE-SSH
T ss_pred EEeeCCH
Confidence 8876655
No 290
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=58.53 E-value=12 Score=32.62 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=27.1
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
..+++.|.+++..+-++.|.|.|+.+|..++...+
T Consensus 89 iGVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 89 IGVLKALFEANLLPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 45566666666666689999999999999888654
No 291
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.53 E-value=71 Score=25.57 Aligned_cols=60 Identities=13% Similarity=0.240 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChh-hhHHHHHHHHHHHHhCCCCcEEEEEE
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYW-READDLRAVVQYFCGANRAVGAILGH 162 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~-~~~~d~~~~i~~l~~~~~~~i~l~G~ 162 (318)
-..+++...++|+.++.+-+++.-... .....+. -...++.+++.+++.++.+++++.|-
T Consensus 17 P~~va~~a~~~G~~~~ii~l~~eaD~~--~~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G~ 77 (279)
T COG3494 17 PLEVAENARNQGYAPFIIGLRGEADPE--LKEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAGG 77 (279)
T ss_pred cHHHHHHHHhCCCCcEEEEecCccchh--hhcCCCeEEeHHHHHHHHHHHHHcCCcEEEEecc
Confidence 356788888999999999998643322 2222222 22678999999999998889998874
No 292
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=57.09 E-value=1.2e+02 Score=25.58 Aligned_cols=28 Identities=29% Similarity=0.394 Sum_probs=22.5
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 99 PSMVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
.....+++.|.++|+++..+- ||||...
T Consensus 66 P~v~~L~~~l~~~g~~~~ils-RGYg~~~ 93 (325)
T PRK00652 66 PVVIALAEQLQARGLKPGVVS-RGYGGKL 93 (325)
T ss_pred HHHHHHHHHHHHCCCeEEEEC-CCCCCCc
Confidence 677888999999999877665 8888754
No 293
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.18 E-value=21 Score=28.88 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCC-cEEEEEEechHHHHHHHHhhcC
Q 021050 143 RAVVQYFCGANRA-VGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 143 ~~~i~~l~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
..+++.+.+.+.. -=.++|.|.|+.++..++...+
T Consensus 14 ~Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 14 AGVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCc
Confidence 3455666555554 3389999999999999888754
No 294
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=55.42 E-value=5.5 Score=31.35 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=30.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+.|+||++.|+.+++-......+...|..+|++|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 3579999999998885456777888888889999999877
No 295
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=55.10 E-value=37 Score=24.75 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=33.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+..+|++.|+.++.-+.....+.+.|.++|-..+..|--
T Consensus 29 qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDGD 68 (207)
T KOG0635|consen 29 QKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDGD 68 (207)
T ss_pred CCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecCc
Confidence 4568999999999887767788899999999888888743
No 296
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=53.86 E-value=22 Score=25.54 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=29.2
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
++|.+-|..++.-+.....++..|.++||+|.++=.-+||...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 4677777766664467788999999999999877666666554
No 297
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=53.85 E-value=17 Score=29.65 Aligned_cols=29 Identities=21% Similarity=0.094 Sum_probs=21.4
Q ss_pred HHHHhCC-CCcEEEEEEechHHHHHHHHhh
Q 021050 147 QYFCGAN-RAVGAILGHSKGGSVVLLYASK 175 (318)
Q Consensus 147 ~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 175 (318)
+.+.+.+ ..+-.++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3344445 7788999999999888876643
No 298
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=52.92 E-value=17 Score=27.47 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=24.5
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+..+-||.+-+.....++..|+++|++|+.+|.-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 34445455543356677999999999999999984
No 299
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=52.27 E-value=17 Score=31.58 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 178 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 178 (318)
..+++.|.+++..+-++.|.|.|+.+|..++...++
T Consensus 83 ~GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 83 FGVVKALLDADLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 355666666666666899999999999999986543
No 300
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=52.24 E-value=17 Score=31.25 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
..+++.|.+.+..+-++.|.|.|+.+|..+|...+
T Consensus 99 ~Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~ 133 (391)
T cd07229 99 LGVVKALWLRGLLPRIITGTATGALIAALVGVHTD 133 (391)
T ss_pred HHHHHHHHHcCCCCceEEEecHHHHHHHHHHcCCH
Confidence 35566666667777789999999999999998544
No 301
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=52.07 E-value=89 Score=22.64 Aligned_cols=75 Identities=17% Similarity=0.112 Sum_probs=41.0
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCcc
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIR 180 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~ 180 (318)
-..+.++|.+.||.|+-+-. + ..+ ..+|.+.+..+...+. + +.....++....|-.+++ +|.+.|.|+
T Consensus 13 K~~l~~~L~~~g~eV~D~G~--~---~~~--~~dYpd~a~~va~~V~---~-g~~~~GIliCGtGiG~si-aANK~~GIr 80 (144)
T TIGR00689 13 KSEIIEHLKQKGHEVIDCGT--L---YDE--RVDYPDYAKLVADKVV---A-GEVSLGILICGTGIGMSI-AANKFKGIR 80 (144)
T ss_pred HHHHHHHHHHCCCEEEEcCC--C---CCC--CCChHHHHHHHHHHHH---c-CCCceEEEEcCCcHHHHH-HHhcCCCeE
Confidence 35678899999998754321 1 111 1356555555554443 2 222334444444433333 367888888
Q ss_pred EEEEecc
Q 021050 181 TFVNVSG 187 (318)
Q Consensus 181 ~~v~~~~ 187 (318)
+.+..++
T Consensus 81 aa~~~d~ 87 (144)
T TIGR00689 81 AALCVDE 87 (144)
T ss_pred EEEECCH
Confidence 7776654
No 302
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=52.07 E-value=1.2e+02 Score=25.33 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=25.2
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
.+++++|.+.++.......+++.|.++|+.|..+...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 35555665433322567788999988899988776544
No 303
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=51.84 E-value=46 Score=26.70 Aligned_cols=40 Identities=10% Similarity=0.092 Sum_probs=26.9
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCce-EEEEcCC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS-AFRFDFA 121 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 121 (318)
++.+.|++++-.++... .+.....+.|.+.|+. |-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~-~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPR-EVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChH-HHHHHHHHHHHHcCCceeEEEecC
Confidence 35677888886665443 3566777888888884 5666664
No 304
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=50.15 E-value=29 Score=22.23 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=23.6
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
+++-|.++..-+.....++..|++.|++|+.+|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344455544433566788899998999999998
No 305
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=49.84 E-value=59 Score=22.95 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=23.7
Q ss_pred CCeEEEEEccCCCCCCC-----------hhHH-----------HHHHHHHHcCceEEEE
Q 021050 82 SSEIVVLCHGFRSTKDD-----------PSMV-----------NLAVALQNEGISAFRF 118 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-----------~~~~-----------~~~~~l~~~G~~v~~~ 118 (318)
+..++||+||-..+... .+|. .....|.+.|++|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 45789999996533321 2231 2456678889998765
No 306
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=49.42 E-value=1.5e+02 Score=24.57 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=52.9
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCC-----C----------CCCCCcc-CCC-hhh----hHHH
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGN-----G----------ESEGSFQ-YGN-YWR----EADD 141 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~g~-----G----------~s~~~~~-~~~-~~~----~~~d 141 (318)
+=.|+-|.|... ....++++|.++ +.+++++|.-+. | .+.-+.. ..+ +++ -.++
T Consensus 170 ~d~fVagvGTGG---TitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~ 246 (300)
T COG0031 170 VDAFVAGVGTGG---TITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEE 246 (300)
T ss_pred CCEEEEeCCcch---hHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHH
Confidence 444444554443 257788888766 478999987752 2 1111100 000 111 1345
Q ss_pred HHHHHHHHHhCCCCcEEEEEEechHHHH--HHHHhhcCCccEEEEecc
Q 021050 142 LRAVVQYFCGANRAVGAILGHSKGGSVV--LLYASKYNDIRTFVNVSG 187 (318)
Q Consensus 142 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a--~~~a~~~p~v~~~v~~~~ 187 (318)
..+.++.|..+. =.++|-|.|+.++ +.+|.+.+.=+.+|.+-|
T Consensus 247 A~~~~r~La~~e---GilvG~SsGA~~~aa~~~a~~~~~g~~IVti~p 291 (300)
T COG0031 247 AIATARRLAREE---GLLVGISSGAALAAALKLAKELPAGKTIVTILP 291 (300)
T ss_pred HHHHHHHHHHHh---CeeecccHHHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 555566664432 3899999999874 456666654344554433
No 307
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=49.41 E-value=28 Score=27.76 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCC--c--EEEEEEechHHHHHHHHhhcC
Q 021050 144 AVVQYFCGANRA--V--GAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 144 ~~i~~l~~~~~~--~--i~l~G~S~Gg~~a~~~a~~~p 177 (318)
.+++.|.+.+.. + -.++|-|.|+.++..+|...+
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 16 GVASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 345555554433 1 289999999999999888653
No 308
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=49.29 E-value=91 Score=27.41 Aligned_cols=70 Identities=11% Similarity=0.119 Sum_probs=41.8
Q ss_pred HHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC---ccE
Q 021050 105 AVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IRT 181 (318)
Q Consensus 105 ~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~ 181 (318)
.+.+...+|.++.+|-+|.-... ....+.+..+.+.. .+..++++--++-|.-+...|..+.+ +.+
T Consensus 175 l~~~~~~~~DvViIDTaGr~~~d--------~~lm~El~~i~~~~---~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g 243 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHKQE--------DSLFEEMLQVAEAI---QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGS 243 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCcch--------HHHHHHHHHHhhhc---CCcEEEEEeccccChhHHHHHHHHHhccCCcE
Confidence 34445568999999999742211 12233444443333 55667888777777666666665532 677
Q ss_pred EEEe
Q 021050 182 FVNV 185 (318)
Q Consensus 182 ~v~~ 185 (318)
+|+.
T Consensus 244 ~IlT 247 (429)
T TIGR01425 244 VIIT 247 (429)
T ss_pred EEEE
Confidence 7764
No 309
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.24 E-value=38 Score=26.39 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=28.8
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+.|.+|++-|..... .-..+++.|++.||.|++--.+
T Consensus 4 ~~~~k~VlItgcs~GG---IG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGG---IGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCcc---hhHHHHHHHHhCCeEEEEEccc
Confidence 3556777787766555 3577999999999999987654
No 310
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=48.96 E-value=44 Score=20.71 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=20.1
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHH-cCceEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQN-EGISAFRF 118 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~ 118 (318)
..|.++++||..... ...+++.+++ +|+.++.+
T Consensus 30 ~~~~~~lvhGga~~G----aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAPKG----ADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCCCC----HHHHHHHHHHHCCCeeEEe
Confidence 447788999987333 3445555544 46665544
No 311
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=48.91 E-value=1.3e+02 Score=23.59 Aligned_cols=36 Identities=14% Similarity=0.208 Sum_probs=30.2
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
++|++.|.++++-+.+...+++.|.+++++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 478899999988766788999999999998887754
No 312
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=48.07 E-value=46 Score=24.59 Aligned_cols=41 Identities=12% Similarity=0.183 Sum_probs=34.1
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
+.|+=+-|+.+++-......+++.|..+||+|.++-..+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 35666777777665568889999999999999999999988
No 313
>PRK07933 thymidylate kinase; Validated
Probab=47.89 E-value=46 Score=25.91 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=32.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
+|.+=|.-+++-+.....+++.|..+|+.|+....|.+|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 45666766666546778899999999999999999977643
No 314
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=47.81 E-value=1.1e+02 Score=24.49 Aligned_cols=61 Identities=15% Similarity=0.157 Sum_probs=40.9
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
...=++++|..|+.-++....+...+...|.+++-++-- ...++..+++.++..+ .+++|+
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~----------------~L~~l~~l~~~l~~~~-~kFIlf 111 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKE----------------DLGDLPELLDLLRDRP-YKFILF 111 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHH----------------HhccHHHHHHHHhcCC-CCEEEE
Confidence 334566688877776667777888888889888777632 2556777777776543 456665
No 315
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=47.07 E-value=34 Score=28.25 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+++.+.+.+..+-++.|.|.|+.+|..++...
T Consensus 86 Gvl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 86 GVVKALWEQDLLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 445555555555568999999999999988754
No 316
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=46.74 E-value=34 Score=28.48 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhc
Q 021050 143 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 143 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
..+++.+.+.+..+-++.|-|.|+.+|..++...
T Consensus 84 ~GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 84 VGVVRTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 3455556555666668999999999999988753
No 317
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=46.70 E-value=93 Score=22.99 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEecc
Q 021050 139 ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 187 (318)
Q Consensus 139 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 187 (318)
.+++.+.++.++.. ..+|+++|-|..|..-+.++...++ |..++=.+|
T Consensus 54 ~~~l~~~L~~~~~~-gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKAE-GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHT-T--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHc-CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 34455555555543 4779999999999999988877666 777765544
No 318
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=46.34 E-value=1.6e+02 Score=24.32 Aligned_cols=52 Identities=10% Similarity=0.100 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhC-----CCCcEEEEEEechHHHHHHHHhhcCC---ccEEEEeccCcc
Q 021050 139 ADDLRAVVQYFCGA-----NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 190 (318)
Q Consensus 139 ~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 190 (318)
-..+..-|+|.+.. +++++.++|-|.|=.+|.+.++.+.. --|+..--|...
T Consensus 21 e~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte 80 (398)
T COG3007 21 EANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTE 80 (398)
T ss_pred HHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCcc
Confidence 34567778888765 67789999999999999988877642 334444444433
No 319
>PRK14974 cell division protein FtsY; Provisional
Probab=46.07 E-value=1.9e+02 Score=24.59 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=38.2
Q ss_pred HHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcC---CccEEEEe
Q 021050 109 QNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN---DIRTFVNV 185 (318)
Q Consensus 109 ~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~v~~ 185 (318)
...|+.++.+|-.|..... ....+.+..+.+.+ .+..++++.-+.-|.-+...+..+. .+.++|+.
T Consensus 219 ~~~~~DvVLIDTaGr~~~~--------~~lm~eL~~i~~~~---~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHTD--------ANLMDELKKIVRVT---KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HhCCCCEEEEECCCccCCc--------HHHHHHHHHHHHhh---CCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 4457888888887654322 22244444444433 4455677777766766666555443 26777754
No 320
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=45.84 E-value=30 Score=25.76 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=27.9
Q ss_pred CCCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEE
Q 021050 80 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRF 118 (318)
Q Consensus 80 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~ 118 (318)
..+.+.|+++-|.|.+. ..--..++.|.++|+.|.++
T Consensus 22 ~~~~~~v~il~G~GnNG--gDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 22 SPKGPRVLILCGPGNNG--GDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CCTT-EEEEEE-SSHHH--HHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCeEEEEECCCCCh--HHHHHHHHHHHHCCCeEEEE
Confidence 34667888888988777 44677899999999998883
No 321
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=45.52 E-value=1.3e+02 Score=22.57 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCc
Q 021050 100 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDI 179 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v 179 (318)
.-..+.++|.+.||.|+-+-- + ... ..+|.+.+..+...+ .+...+ ..|+-...|-.+++ +|.+.|.|
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~--~---~~e--~~dYpd~a~~va~~V---~~g~~d-~GIliCGTGiG~si-aANKv~GI 81 (171)
T PRK08622 14 EKMAVSDYLKSKGHEVIDVGT--Y---DFT--RTHYPIFGKKVGEAV---ASGEAD-LGVCICGTGVGISN-AVNKVPGI 81 (171)
T ss_pred HHHHHHHHHHHCCCEEEEcCC--C---CCC--CCChHHHHHHHHHHH---HcCCCc-EEEEEcCCcHHHHH-HHhcCCCe
Confidence 345688999999998854332 1 111 134555555554444 232223 33333333333333 36778888
Q ss_pred cEEEEecc
Q 021050 180 RTFVNVSG 187 (318)
Q Consensus 180 ~~~v~~~~ 187 (318)
.+.+..++
T Consensus 82 RAA~~~d~ 89 (171)
T PRK08622 82 RSALVRDM 89 (171)
T ss_pred EEEEeCCH
Confidence 88776654
No 322
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=45.40 E-value=39 Score=27.11 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=23.2
Q ss_pred HHHHHHHhCCCC----cEEEEEEechHHHHHHHHhhcC
Q 021050 144 AVVQYFCGANRA----VGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 144 ~~i~~l~~~~~~----~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
.+++.|.++++. .-.+.|-|.|+..+..++...+
T Consensus 21 GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 21 GVASCLLEHAPFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 345555544332 2468899999999999887653
No 323
>COG0218 Predicted GTPase [General function prediction only]
Probab=45.25 E-value=56 Score=25.10 Aligned_cols=57 Identities=14% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCCcEEEEEcCCCCccCcchh---HHHHhhC---CCCE--EEEECCCCccCCCChHHHHHHHHHHHHh
Q 021050 248 MECSVLTIHGSSDKIIPLQDA---HEFDKII---PNHK--LHVVEGANHGYTNHQAELVSVVLDFVKA 307 (318)
Q Consensus 248 ~~~P~lii~g~~D~~~~~~~~---~~~~~~~---~~~~--~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 307 (318)
...|++++.-.-|.+-..+.. ...++.+ +... +..++-..... -+++...|.+|+..
T Consensus 134 ~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G---i~~l~~~i~~~~~~ 198 (200)
T COG0218 134 LGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG---IDELKAKILEWLKE 198 (200)
T ss_pred cCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC---HHHHHHHHHHHhhc
Confidence 378999999999988654443 2333332 2222 44444322221 36777778777754
No 324
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=45.23 E-value=30 Score=27.69 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCC---cE-EEEEEechHHHHHHHHh
Q 021050 144 AVVQYFCGANRA---VG-AILGHSKGGSVVLLYAS 174 (318)
Q Consensus 144 ~~i~~l~~~~~~---~i-~l~G~S~Gg~~a~~~a~ 174 (318)
.+++.|.+.+.. ++ .+.|-|+|+.++..++.
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 445555555442 34 79999999999999984
No 325
>PRK00889 adenylylsulfate kinase; Provisional
Probab=45.01 E-value=48 Score=24.64 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=28.8
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
.+.+|.+.|..++.-+.....++..+...|..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 34588888998888655667788888777888877764
No 326
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=44.66 E-value=40 Score=24.61 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=21.5
Q ss_pred HHHHHHHhCCC--CcEEEEEEechHHHHHHHH
Q 021050 144 AVVQYFCGANR--AVGAILGHSKGGSVVLLYA 173 (318)
Q Consensus 144 ~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a 173 (318)
.+++.+.+++. .--.+.|.|.|+.++..++
T Consensus 15 gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 15 GVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 34455544443 4458889999999999988
No 327
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=44.43 E-value=52 Score=23.95 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCceEEEEcCCC
Q 021050 101 MVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g 122 (318)
...+.+.|.+.|+.+..++...
T Consensus 2 ~~~~~~~f~~~g~~v~~l~~~~ 23 (154)
T PF03575_consen 2 VEKFRKAFRKLGFEVDQLDLSD 23 (154)
T ss_dssp HHHHHHHHHHCT-EEEECCCTS
T ss_pred HHHHHHHHHHCCCEEEEEeccC
Confidence 4566778888898888888763
No 328
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.34 E-value=1.7e+02 Score=26.20 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=49.1
Q ss_pred EEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHH
Q 021050 88 LCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGS 167 (318)
Q Consensus 88 ~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~ 167 (318)
|--|+|.+.. .....-+++-...||.|+.+|--|.-... ......+..++ ....++.|..+|.-+=|.
T Consensus 443 fekGYgkd~a-~vak~AI~~a~~~gfDVvLiDTAGR~~~~--------~~lm~~l~k~~---~~~~pd~i~~vgealvg~ 510 (587)
T KOG0781|consen 443 FEKGYGKDAA-GVAKEAIQEARNQGFDVVLIDTAGRMHNN--------APLMTSLAKLI---KVNKPDLILFVGEALVGN 510 (587)
T ss_pred HhhhcCCChH-HHHHHHHHHHHhcCCCEEEEeccccccCC--------hhHHHHHHHHH---hcCCCceEEEehhhhhCc
Confidence 3345555542 23344455666679999999987642221 11122333333 333677899999888777
Q ss_pred HHHHHHhhc---------CC-ccEEEEe
Q 021050 168 VVLLYASKY---------ND-IRTFVNV 185 (318)
Q Consensus 168 ~a~~~a~~~---------p~-v~~~v~~ 185 (318)
-++.-+.++ |+ |+++++.
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 666544332 44 7777754
No 329
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=44.03 E-value=1.9e+02 Score=24.08 Aligned_cols=74 Identities=9% Similarity=0.090 Sum_probs=43.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc----CCCC--CCCCC-----------------CccCCChhhhHHH
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD----FAGN--GESEG-----------------SFQYGNYWREADD 141 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d----~~g~--G~s~~-----------------~~~~~~~~~~~~d 141 (318)
.||++-|-.+++- ..++-.|++++..++..| |+|. |.... +....+...+.++
T Consensus 5 ~ii~I~GpTasGK----S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~ 80 (300)
T PRK14729 5 KIVFIFGPTAVGK----SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKE 80 (300)
T ss_pred cEEEEECCCccCH----HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHH
Confidence 4778888777763 334445555545788888 4443 22221 1122345666788
Q ss_pred HHHHHHHHHhCCCCcEEEEEEe
Q 021050 142 LRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 142 ~~~~i~~l~~~~~~~i~l~G~S 163 (318)
...+|+.+..++.- .+|+|-|
T Consensus 81 a~~~i~~i~~~gk~-PilvGGT 101 (300)
T PRK14729 81 ALKIIKELRQQKKI-PIFVGGS 101 (300)
T ss_pred HHHHHHHHHHCCCC-EEEEeCc
Confidence 88888887665433 3555543
No 330
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=43.86 E-value=1.4e+02 Score=22.43 Aligned_cols=76 Identities=9% Similarity=0.030 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCc
Q 021050 100 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDI 179 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v 179 (318)
.-..+.++|.++||.|+-+-.. ... ..+|.+.+..+...+ .....+ ..|+-...|-.++ .+|.+.|.|
T Consensus 14 lK~~l~~~L~~~G~eV~D~G~~-----~~~--~~dYpd~a~~va~~V---~~g~~~-~GIliCGTGiG~s-iaANKv~GI 81 (171)
T TIGR01119 14 VKMEVSEFLKSKGYEVLDVGTY-----DFT--RTHYPIFGKKVGEAV---VSGEAD-LGVCICGTGVGIN-NAVNKVPGV 81 (171)
T ss_pred HHHHHHHHHHHCCCEEEEeCCC-----CCC--CCChHHHHHHHHHHH---HcCCCC-EEEEEcCCcHHHH-HHHhcCCCe
Confidence 3456889999999988543321 111 134555555554444 332333 3333333333233 336788888
Q ss_pred cEEEEecc
Q 021050 180 RTFVNVSG 187 (318)
Q Consensus 180 ~~~v~~~~ 187 (318)
++.+..++
T Consensus 82 RAAl~~d~ 89 (171)
T TIGR01119 82 RSALVRDM 89 (171)
T ss_pred EEEEeCCH
Confidence 87776654
No 331
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=43.37 E-value=21 Score=29.75 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=16.7
Q ss_pred EEEEEechHHHHHHHHhhc
Q 021050 158 AILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+.|.|+||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6889999999999998754
No 332
>PRK06696 uridine kinase; Validated
Probab=43.25 E-value=58 Score=25.50 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=30.8
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
.++|.||.+.|..+++-+.....+++.|...|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 457899999999988866677788888877787777744
No 333
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=43.14 E-value=85 Score=21.11 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=21.5
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRF 118 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~ 118 (318)
...++||++.+..... ....+..|...||.|..+
T Consensus 63 ~~~~vvvyc~~g~~~~----s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGPGCNG----ATKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCCCCch----HHHHHHHHHHcCCeEEEe
Confidence 4567777776543222 355667788889986544
No 334
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=42.98 E-value=1.3e+02 Score=21.82 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCcc
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIR 180 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~ 180 (318)
-..+.++|.++||.|+-+-. +. .. ..+|.+.+..+...+. +... ...++....|-.+++ .|.+.|.|.
T Consensus 14 K~~l~~~L~~~g~eV~D~G~--~~---~~--~~dYpd~a~~va~~V~---~~~~-~~GIliCGtGiG~si-aANK~~GIr 81 (143)
T TIGR01120 14 KEEIKAFLVERGVKVIDKGT--WS---SE--RTDYPHYAKQVALAVA---GGEV-DGGILICGTGIGMSI-AANKFAGIR 81 (143)
T ss_pred HHHHHHHHHHCCCEEEEeCC--CC---CC--CCCHHHHHHHHHHHHH---CCCC-ceEEEEcCCcHHHHH-HHhcCCCeE
Confidence 35678889999998854321 11 11 1356555555554442 3222 334443334433333 367888888
Q ss_pred EEEEecc
Q 021050 181 TFVNVSG 187 (318)
Q Consensus 181 ~~v~~~~ 187 (318)
+.+..++
T Consensus 82 aa~~~d~ 88 (143)
T TIGR01120 82 AALCSEP 88 (143)
T ss_pred EEEECCH
Confidence 7776654
No 335
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=42.87 E-value=2.3e+02 Score=24.74 Aligned_cols=36 Identities=11% Similarity=0.246 Sum_probs=22.1
Q ss_pred eEEEEEccCCCCC-CChhHHHHHHHHHHcCceEEEEc
Q 021050 84 EIVVLCHGFRSTK-DDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 84 ~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
.++|+++...... .+.....-...|.+.|+.|+-+.
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~ 153 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA 153 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC
Confidence 4455665443222 22446677788888899887665
No 336
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=42.70 E-value=30 Score=28.10 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=26.6
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
..||++|....+. .....+.+.|.++||.++.++
T Consensus 231 G~IILmHd~~~T~--~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASST--EGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHH--HHHHHHHHHHHHCCCEEEeHH
Confidence 4688999765544 457889999999999998774
No 337
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=42.59 E-value=36 Score=26.73 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=26.4
Q ss_pred CeEEEEEccCCC-CCCChhHHHHHHHHHHcCceEEEEc
Q 021050 83 SEIVVLCHGFRS-TKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 83 ~~~vv~~hG~~~-~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
...||++|.... +. .....+.+.|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~--~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNA--EALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHH--HHHHHHHHHHHHCCCEEEEhH
Confidence 346999997532 22 357789999999999998774
No 338
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=42.36 E-value=37 Score=27.12 Aligned_cols=33 Identities=15% Similarity=0.073 Sum_probs=22.2
Q ss_pred HHHHHHhCCC--CcEEEEEEechHHHHHHHHhhcC
Q 021050 145 VVQYFCGANR--AVGAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 145 ~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p 177 (318)
+++.|.+.+. ..-.+.|-|+|+.+|..+|...+
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 4444444431 12249999999999999887654
No 339
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=42.02 E-value=24 Score=26.81 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=24.4
Q ss_pred eEEEEEccCCCCCC-ChhHHHHHHHHHHcCceEEEEc
Q 021050 84 EIVVLCHGFRSTKD-DPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 84 ~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d 119 (318)
..||++|....... ......+.+.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 45999995322211 0346778889999999998764
No 340
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=41.66 E-value=1.5e+02 Score=22.22 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=28.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
..+.++++.|..++.-+.....+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 556899999988887545566777777777777777753
No 341
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=41.66 E-value=1.4e+02 Score=21.99 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=37.7
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCC----ChhHHHHHHHHHHcCceEEEEcC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKD----DPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~----~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
-+++.+..+|..+. +..-..+++||++..-..+.. ...++...+.+.+.|..|+.+..
T Consensus 11 PdF~Lp~~~g~~v~--Lsd~~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS~ 72 (157)
T COG1225 11 PDFELPDQDGETVS--LSDLRGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGISP 72 (157)
T ss_pred CCeEeecCCCCEEe--hHHhcCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 56778888887754 333333477777776554442 23466677778888999988763
No 342
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=41.62 E-value=52 Score=24.31 Aligned_cols=39 Identities=26% Similarity=0.241 Sum_probs=27.2
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
|.+..+-||.+-+.....++..+++.|++|+.+|.--.|
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~q~ 40 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADIYG 40 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 344445455544456778899999999999999875444
No 343
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.34 E-value=41 Score=27.01 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=17.9
Q ss_pred EEEEEEechHHHHHHHHhhcC
Q 021050 157 GAILGHSKGGSVVLLYASKYN 177 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~p 177 (318)
-.++|-|.|+..+..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 379999999999999987654
No 344
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=41.26 E-value=1e+02 Score=20.32 Aligned_cols=81 Identities=10% Similarity=0.096 Sum_probs=49.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 160 (318)
++++|||..|........+.....+.|.+.|.....+|... + . ++...+..+... ....+++=
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~-----------~-~----~~~~~l~~~tg~~tvP~vfi~ 74 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE-----------D-P----EIRQGIKEYSNWPTIPQLYVK 74 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC-----------C-H----HHHHHHHHHhCCCCCCEEEEC
Confidence 57889998887544443456677788888887777676630 1 1 122222222222 33456666
Q ss_pred EEechHHHHHHHHhhcCC
Q 021050 161 GHSKGGSVVLLYASKYND 178 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~ 178 (318)
|...||.--+..+.+..+
T Consensus 75 g~~iGG~ddl~~l~~~g~ 92 (97)
T TIGR00365 75 GEFVGGCDIIMEMYQSGE 92 (97)
T ss_pred CEEEeChHHHHHHHHCcC
Confidence 888999988776655443
No 345
>TIGR00089 RNA modification enzyme, MiaB family. This subfamily is aparrently a part of a larger superfamily of enzymes utilizing both a 4Fe4S cluster and S-adenosyl methionine (SAM) to initiate radical reactions. MiaB acts on a particular isoprenylated Adenine base of certain tRNAs causing thiolation at an aromatic carbon, and probably also transferring a methyl grouyp from SAM to the thiol. The particular substrate of the three other clades is unknown but may be very closely related.
Probab=40.98 E-value=2.5e+02 Score=24.75 Aligned_cols=93 Identities=5% Similarity=0.005 Sum_probs=51.9
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCCCh-hhhHHHHHHHHHHHHhCCCCc-EEEEEEe
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNY-WREADDLRAVVQYFCGANRAV-GAILGHS 163 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~~~-~~~~~d~~~~i~~l~~~~~~~-i~l~G~S 163 (318)
|+++-+|+..+......+...|.+.||.++-.+-. .+--. ...++ ..........++.++..+... .+++|-+
T Consensus 2 ~~~~t~GC~~N~~ds~~~~~~l~~~g~~~~~~~~~----aD~v~intC~v~~~a~~~~~~~i~~~~~~~~~~~~vvvgGc 77 (429)
T TIGR00089 2 VYIETYGCQMNEADSEIMAGLLKEAGYEVTDDPEE----ADVIIINTCAVREKAEQKVRSRLGELAKLKKKNAKIVVAGC 77 (429)
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHHCcCEECCCccc----CCEEEEecceeechHHHHHHHHHHHHHHhCcCCCEEEEECc
Confidence 56777887776566778889998899966532110 00000 00011 222345666666665554332 5666666
Q ss_pred chHHHHHHHHhhcCCccEEE
Q 021050 164 KGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 164 ~Gg~~a~~~a~~~p~v~~~v 183 (318)
+-....-.++...|.++.++
T Consensus 78 ~a~~~~ee~~~~~~~vd~vv 97 (429)
T TIGR00089 78 LAQREGEELLKRIPEVDIVL 97 (429)
T ss_pred ccccCHHHHHhhCCCCCEEE
Confidence 65555555555667777654
No 346
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=40.97 E-value=2.2e+02 Score=24.02 Aligned_cols=47 Identities=13% Similarity=0.229 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEEEechHHH--------HHHHHhhcCCccEEEEe
Q 021050 139 ADDLRAVVQYFCGAN-RAVGAILGHSKGGSV--------VLLYASKYNDIRTFVNV 185 (318)
Q Consensus 139 ~~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~--------a~~~a~~~p~v~~~v~~ 185 (318)
.+-+..+++.+.... ..+++|+=|++=|.. ++...+..|.|.-+..+
T Consensus 120 ~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIASi 175 (326)
T PF04084_consen 120 SEQLDFIISYLESRPSPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIASI 175 (326)
T ss_pred HHHHHHHHHHHhccCCCCceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEec
Confidence 334444555555543 678999999987665 33444555665544444
No 347
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=40.93 E-value=44 Score=24.71 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=24.8
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+..+-|+..-+.....++..|+++|++|+.+|.-
T Consensus 3 ~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 3 VVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444444443356778899999999999999864
No 348
>PLN02748 tRNA dimethylallyltransferase
Probab=40.76 E-value=2.1e+02 Score=25.63 Aligned_cols=77 Identities=17% Similarity=0.143 Sum_probs=44.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEc----CCCC--CCCC-----------------CCccCCChhh
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFD----FAGN--GESE-----------------GSFQYGNYWR 137 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d----~~g~--G~s~-----------------~~~~~~~~~~ 137 (318)
+.+.+|++-|-.+++- ..++..|+.+ +..++..| |+|. |... .+....+...
T Consensus 20 ~~~~~i~i~GptgsGK----s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK----SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCEEEEECCCCCCH----HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 4455778888777763 3344455444 56788887 3442 2221 1112345567
Q ss_pred hHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 138 EADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
+..+...+|+.+..++.- .+|+|-|
T Consensus 96 F~~~A~~~I~~I~~rgk~-PIlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSRNGL-PVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhcCCC-eEEEcCh
Confidence 788888889888776543 4555543
No 349
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=40.63 E-value=54 Score=22.36 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=24.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDF 120 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~ 120 (318)
+|++.|..+++ =..+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsG----KST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSG----KSTLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSS----HHHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCC----HHHHHHHHHHHHCCeEEEecc
Confidence 68889998888 34566777665 899988887
No 350
>CHL00175 minD septum-site determining protein; Validated
Probab=40.45 E-value=62 Score=26.34 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=29.8
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
..+|.+..|-||.+-+.....++..|++.|++|+.+|.-
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 356667776666665456778889999999999999874
No 351
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=40.17 E-value=46 Score=27.12 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=29.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
++.+. |=||.+-+.....++..|+++|++|+++|+--.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 34555 655555334567899999999999999998655443
No 352
>PRK14331 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=39.90 E-value=2.6e+02 Score=24.72 Aligned_cols=94 Identities=9% Similarity=-0.104 Sum_probs=49.1
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-ccCCCh-hhhHHHHHHHH---HHHHhCCCCcEEEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVV---QYFCGANRAVGAILG 161 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~-~~~~~~-~~~~~d~~~~i---~~l~~~~~~~i~l~G 161 (318)
++++-+|+..+...-..+...|.+.||.+..- . ...+-- -...++ ......+...+ +.++...++..+++|
T Consensus 3 ~~i~t~GC~~N~~ds~~~~~~l~~~G~~~~~~--~--~~aDviiiNTC~v~~~a~~k~~~~i~~~~~~k~~~p~~~ivv~ 78 (437)
T PRK14331 3 YYIKTFGCQMNFNDSEKIKGILQTLGYEPADD--W--EEADLILVNTCTIREKPDQKVLSHLGEYKKIKEKNPNALIGVC 78 (437)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECCC--c--ccCCEEEEeCcceecHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 67778888876555677888998889865431 1 011100 001111 12233444444 444444444456665
Q ss_pred EechHHHHHHHHhhcCCccEEEE
Q 021050 162 HSKGGSVVLLYASKYNDIRTFVN 184 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~v~~~v~ 184 (318)
-++.....-.++...|.++.++.
T Consensus 79 Gc~a~~~~e~~~~~~p~vD~vv~ 101 (437)
T PRK14331 79 GCLAQRAGYEIVQKAPFIDIVFG 101 (437)
T ss_pred cchhcCChHHHHhcCCCCcEEEC
Confidence 55555444455556677776653
No 353
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=39.19 E-value=1.5e+02 Score=27.71 Aligned_cols=63 Identities=19% Similarity=0.221 Sum_probs=40.9
Q ss_pred CCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCC--CCCCCCCccCCChhhhHHHHHHHHHHHHh
Q 021050 82 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAG--NGESEGSFQYGNYWREADDLRAVVQYFCG 151 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g--~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 151 (318)
-+.+++++||.....-. .....+...|..+|..|-.+-+|+ |+.+.. .....-+..+++|+..
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~-------~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP-------ENRVKVLKEILDWFKR 615 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc-------hhHHHHHHHHHHHHHH
Confidence 45679999998866521 234567888888898888777775 444441 2224455566666643
No 354
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=38.94 E-value=72 Score=26.43 Aligned_cols=62 Identities=15% Similarity=0.022 Sum_probs=35.2
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHH
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYF 149 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l 149 (318)
...+||.+.|+-.++ --+..|+++||.|..+=++.+-.-+........+...+|+..+++.|
T Consensus 5 ~~~VvvamSgGVDSs------Vaa~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~L 66 (377)
T KOG2805|consen 5 PDRVVVAMSGGVDSS------VAARLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQL 66 (377)
T ss_pred cceEEEEecCCchHH------HHHHHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHh
Confidence 345666666655443 23566788899999887777632222222333444455666555555
No 355
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=38.92 E-value=1.9e+02 Score=22.65 Aligned_cols=39 Identities=5% Similarity=-0.050 Sum_probs=24.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCce-EEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS-AFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 121 (318)
..+.|+++.-.+...+ .....+.+.+.+.|+. +..++..
T Consensus 28 ~~~~i~~iptA~~~~~-~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPA-EVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChh-HHHHHHHHHHHHcCCceeEEeccC
Confidence 4566667666555443 3566777888887874 5556554
No 356
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=38.69 E-value=23 Score=31.19 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=32.1
Q ss_pred EEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccCCCChHHHHHHHHHHHHh
Q 021050 254 TIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKA 307 (318)
Q Consensus 254 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 307 (318)
+++|..|..|+.+.++... +..+....++ +.|..+...+++.+.|.+||..
T Consensus 371 ~~y~dGDGTV~~~S~~~~~--~~~~~~~~l~-~~H~~il~n~~v~~~I~~fL~~ 421 (440)
T PLN02733 371 YTYVDGDGTVPVESAKADG--LNAVARVGVP-GDHRGILRDEHVFRILKHWLKV 421 (440)
T ss_pred EEEeCCCCEEecchhhccC--ccccccccCC-chHHHHhcCHHHHHHHHHHHhc
Confidence 3445556666655544321 2223444555 7899777788999999999963
No 357
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=38.59 E-value=56 Score=22.51 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=25.0
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+.+-|-++..-+.....++..|+++|.+|+.+|.-
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D 36 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDAD 36 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 34556555554456677888888889999999854
No 358
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=38.38 E-value=1.7e+02 Score=21.95 Aligned_cols=75 Identities=11% Similarity=0.041 Sum_probs=39.7
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCcc
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIR 180 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~ 180 (318)
-..+.++|.+.||.|+-+-. + ... ..+|.+.+..+...+ .....+ ..|+....|-.+++ +|.+.|.|.
T Consensus 15 K~~l~~~L~~~G~eV~D~G~--~---~~~--~~dYpd~a~~va~~V---~~g~~d-~GIliCGTGiG~si-aANK~~GIR 82 (171)
T PRK12615 15 KMAVSDFLKSKGYDVIDCGT--Y---DHT--RTHYPIFGKKVGEAV---VNGQAD-LGVCICGTGVGINN-AVNKVPGIR 82 (171)
T ss_pred HHHHHHHHHHCCCEEEEcCC--C---CCC--CCChHHHHHHHHHHH---HcCCCC-EEEEEcCCcHHHHH-HHhcCCCeE
Confidence 35678899999998754321 1 111 134555555444444 332223 34433333333333 367888888
Q ss_pred EEEEecc
Q 021050 181 TFVNVSG 187 (318)
Q Consensus 181 ~~v~~~~ 187 (318)
+.+..++
T Consensus 83 AA~~~d~ 89 (171)
T PRK12615 83 SALVRDM 89 (171)
T ss_pred EEEeCCH
Confidence 7776654
No 359
>PRK03846 adenylylsulfate kinase; Provisional
Probab=38.16 E-value=62 Score=24.72 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=27.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
..|.+|.+.|..++.-+.....+...|...|+.++.+|
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 56778888898777644456667777766777777776
No 360
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=38.08 E-value=58 Score=28.55 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=31.7
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
..|.+|++-|..|..-+.....++.+|.++|+.|..++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 457899999988887555677888889888999888875
No 361
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=38.08 E-value=52 Score=26.00 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=28.7
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
+|.+..+=||.+-+.....++..|+++|++|+.+|.-..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4555555555553356678889999999999999986554
No 362
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=37.94 E-value=73 Score=23.92 Aligned_cols=44 Identities=14% Similarity=0.079 Sum_probs=32.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 125 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~ 125 (318)
..++|+.+-|..++.-+.....+...|..+|++|-.+-..+||.
T Consensus 4 ~~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 4 TMIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CCceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 34567777787776654566888999988899888887776654
No 363
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=37.77 E-value=57 Score=23.88 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=27.8
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
+.+-|..++.-+.....+...|..+|++|.++..-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45557666554456678888998889999999876554
No 364
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=37.65 E-value=88 Score=24.09 Aligned_cols=41 Identities=12% Similarity=0.225 Sum_probs=28.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHH-cCceEEEEcCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQN-EGISAFRFDFAG 122 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~g 122 (318)
..++|.++-+-|+..-+.....++..|+. .|++|+.+|.--
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~ 75 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADL 75 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 34566666555555544556778899986 699999998753
No 365
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=37.47 E-value=37 Score=28.17 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=15.3
Q ss_pred EEEEEechHHHHHHHHh
Q 021050 158 AILGHSKGGSVVLLYAS 174 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~ 174 (318)
.+.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999876
No 366
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=37.46 E-value=93 Score=25.25 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=37.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEG 128 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~ 128 (318)
....|...-|-++..-+.....++..+++.|++|..+|.-.+|.+..
T Consensus 56 ~~~~I~V~S~kgGvGKStva~nLA~alA~~G~rVlliDaD~~gps~~ 102 (265)
T COG0489 56 VKNVIAVTSGKGGVGKSTVAVNLAAALAQLGKRVLLLDADLRGPSIP 102 (265)
T ss_pred cceEEEEEeCCCCCcHHHHHHHHHHHHHhcCCcEEEEeCcCCCCchH
Confidence 45567777777766655677889999999999999999988887753
No 367
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=37.33 E-value=98 Score=22.17 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=24.6
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
|-+=|...+.+. ......++|.++||+|+-++..
T Consensus 19 IAvVG~S~~P~r-~sy~V~kyL~~~GY~ViPVNP~ 52 (140)
T COG1832 19 IAVVGASDKPDR-PSYRVAKYLQQKGYRVIPVNPK 52 (140)
T ss_pred EEEEecCCCCCc-cHHHHHHHHHHCCCEEEeeCcc
Confidence 334455555542 4567889999999999999964
No 368
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=37.24 E-value=1.4e+02 Score=23.26 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=29.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAG 122 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g 122 (318)
..+.|+|++-.....+ .+...+.+.|.+. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~~~~-~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASGDRD-EYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHHhhccCcEEEEEeccC
Confidence 5677888887776543 3566778888888 99988887643
No 369
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=36.16 E-value=74 Score=24.35 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=26.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
..|.+..+-++..-+.....++..|++.|++|+.+|.-
T Consensus 18 kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 18 KVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444444444443356678899999999999999975
No 370
>PRK14340 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=36.12 E-value=3.1e+02 Score=24.34 Aligned_cols=93 Identities=10% Similarity=-0.018 Sum_probs=51.9
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-ccCCChhhh-HHHHHHHHH---HHHhCCCCcEEEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNYWRE-ADDLRAVVQ---YFCGANRAVGAILG 161 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~-~~~~~~~~~-~~d~~~~i~---~l~~~~~~~i~l~G 161 (318)
++++-+|+..+...-..+...|.++||.+.-- + ..++-- -...++... .+.+...+. .+++.++...++++
T Consensus 9 ~~i~tlGC~~N~~dse~~~~~l~~~G~~~~~~--~--~~ADviiiNTC~v~~~A~~k~~~~i~~~~~~k~~~~~~~ivv~ 84 (445)
T PRK14340 9 FYIHTFGCQMNQADSEIITALLQDEGYVPAAS--E--EDADIVLLNTCAVRENAVERIGHYLQHLKGAKRRRKGLLVGVL 84 (445)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECCC--c--ccCCEEEEEeeeeeccHHHHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 78888888886556677888998899866431 1 001100 001111111 223333333 33333445556776
Q ss_pred EechHHHHHHHHhhcCCccEEE
Q 021050 162 HSKGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~v~~~v 183 (318)
-++.-...-.+....|+|+.++
T Consensus 85 GC~a~~~~~e~~~~~p~vd~v~ 106 (445)
T PRK14340 85 GCVPQYEREEMFSMFPVIDFLA 106 (445)
T ss_pred CcccccchHHHHhhCCCCcEEE
Confidence 6676666666666678888776
No 371
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=36.00 E-value=2.7e+02 Score=23.58 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=51.6
Q ss_pred CCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC---CCCcEEEEEEechHHH
Q 021050 92 FRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSV 168 (318)
Q Consensus 92 ~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~ 168 (318)
.|++..+ ....-.+.-..+||.++.+|--|.=.. ..++ .+.+..+.+-+... .+..+.++--+.-|.-
T Consensus 202 ~G~DpAa-VafDAi~~Akar~~DvvliDTAGRLhn-----k~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAttGqn 272 (340)
T COG0552 202 EGADPAA-VAFDAIQAAKARGIDVVLIDTAGRLHN-----KKNL---MDELKKIVRVIKKDDPDAPHEILLVLDATTGQN 272 (340)
T ss_pred CCCCcHH-HHHHHHHHHHHcCCCEEEEeCcccccC-----chhH---HHHHHHHHHHhccccCCCCceEEEEEEcccChh
Confidence 4444432 333344455566899999997753211 1233 44455544444332 2345778889999999
Q ss_pred HHHHHhhcCC---ccEEEEe
Q 021050 169 VLLYASKYND---IRTFVNV 185 (318)
Q Consensus 169 a~~~a~~~p~---v~~~v~~ 185 (318)
++.-|..+.+ +.|+|+.
T Consensus 273 al~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 273 ALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred HHHHHHHHHHhcCCceEEEE
Confidence 9988888766 8888875
No 372
>PLN02412 probable glutathione peroxidase
Probab=35.81 E-value=1.8e+02 Score=21.49 Aligned_cols=61 Identities=10% Similarity=0.177 Sum_probs=37.1
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCCC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAGN 123 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g~ 123 (318)
.+++++..+|..+. +..-..+++||.+....+.... ..+..+.+.+...|+.|+.+....+
T Consensus 10 pdf~l~d~~G~~v~--l~~~~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~~ 73 (167)
T PLN02412 10 YDFTVKDIGGNDVS--LNQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQF 73 (167)
T ss_pred CceEEECCCCCEEe--HHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEeccccc
Confidence 45667767786655 2222346667766654433321 2345567777778999999987643
No 373
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=35.62 E-value=76 Score=26.74 Aligned_cols=39 Identities=10% Similarity=0.162 Sum_probs=28.0
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+..+|.+.|-|+..-+.....++..|++.|++|+.+|.-
T Consensus 30 ~~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 30 KTQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 334555557766664455678889999999999988764
No 374
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=35.56 E-value=68 Score=24.32 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=20.0
Q ss_pred EEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 88 LCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 88 ~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+.|.| +.-..++..|++.|+.|+.+|.-
T Consensus 4 ~ViGlG-----yvGl~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 4 AVIGLG-----YVGLPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEE--S-----TTHHHHHHHHHHTTSEEEEE-S-
T ss_pred EEECCC-----cchHHHHHHHHhCCCEEEEEeCC
Confidence 344655 34578899999999999999975
No 375
>PRK10824 glutaredoxin-4; Provisional
Probab=35.47 E-value=1.5e+02 Score=20.49 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=50.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 160 (318)
+.++|||..|........+.....+.|.+.|.....+|.-. + .++...+..+... -..+|++=
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~-----------d-----~~~~~~l~~~sg~~TVPQIFI~ 77 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ-----------N-----PDIRAELPKYANWPTFPQLWVD 77 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC-----------C-----HHHHHHHHHHhCCCCCCeEEEC
Confidence 57899999997766555566677777777775444445420 1 1233333333222 44578899
Q ss_pred EEechHHHHHHHHhhcCC
Q 021050 161 GHSKGGSVVLLYASKYND 178 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~ 178 (318)
|...||.--+..+.+..+
T Consensus 78 G~~IGG~ddl~~l~~~G~ 95 (115)
T PRK10824 78 GELVGGCDIVIEMYQRGE 95 (115)
T ss_pred CEEEcChHHHHHHHHCCC
Confidence 999999987776655443
No 376
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=35.43 E-value=1.5e+02 Score=22.18 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=23.5
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
-|++.|.|.+. .....+...|..-|..+...+
T Consensus 32 ~I~i~G~G~S~--~~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSG--LVGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHH--HHHHHHHHHHHhCCCeEEEeC
Confidence 47777888766 556677777877788887774
No 377
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=35.13 E-value=35 Score=26.88 Aligned_cols=29 Identities=14% Similarity=0.256 Sum_probs=20.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
=|+++|-|.+.+ +.+|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~D-------~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-------MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-------HHHHHhCCCcEEEEecC
Confidence 456666655442 46778899999999985
No 378
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=35.11 E-value=3.2e+02 Score=24.16 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=41.0
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHH-HHHHHHhhcCC--c
Q 021050 103 NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGS-VVLLYASKYND--I 179 (318)
Q Consensus 103 ~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~-~a~~~a~~~p~--v 179 (318)
.+.+.+.+.++.++.+|-+|+.... ....+.+..+++.........++||=-+..+. -...++..+.. +
T Consensus 290 ~l~~~l~~~~~D~VLIDTaGr~~rd--------~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f~~~~~ 361 (432)
T PRK12724 290 KFKETLARDGSELILIDTAGYSHRN--------LEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNY 361 (432)
T ss_pred HHHHHHHhCCCCEEEEeCCCCCccC--------HHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCC
Confidence 3445555568999999987653222 12344555555444222222355555544444 55555555544 7
Q ss_pred cEEEEe
Q 021050 180 RTFVNV 185 (318)
Q Consensus 180 ~~~v~~ 185 (318)
+++|+.
T Consensus 362 ~glIlT 367 (432)
T PRK12724 362 RRILLT 367 (432)
T ss_pred CEEEEE
Confidence 888864
No 379
>PRK14325 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=35.10 E-value=3.2e+02 Score=24.19 Aligned_cols=93 Identities=8% Similarity=-0.039 Sum_probs=50.0
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-ccCCChh-hhHHHHHHH---HHHHHhCCCCcEEEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNYW-READDLRAV---VQYFCGANRAVGAILG 161 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~-~~~~~~~-~~~~d~~~~---i~~l~~~~~~~i~l~G 161 (318)
++++.+|+..+...-..+...|.+.||.++-- .. ..+-- -...++. .....+... +..++...+...+++|
T Consensus 6 ~~i~t~GC~~N~~ds~~~~~~l~~~g~~~~~~-~~---~aDvviinTC~v~~~a~~~~~~~i~~~~~~k~~~p~~~vvvg 81 (444)
T PRK14325 6 LYIKTYGCQMNEYDSSKMADLLGAEGYELTDD-PE---EADLILLNTCSIREKAQEKVFSELGRWRKLKEKNPDLIIGVG 81 (444)
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHHCcCEECCC-cC---CCCEEEEEcceeeehHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 67888888876666678889999999876631 00 00000 0001111 112233333 3333443444556666
Q ss_pred EechHHHHHHHHhhcCCccEEE
Q 021050 162 HSKGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~v~~~v 183 (318)
-++-....-.++...|.++.++
T Consensus 82 Gc~as~~~ee~~~~~~~vD~vv 103 (444)
T PRK14325 82 GCVAQQEGEEILKRAPYVDIVF 103 (444)
T ss_pred CchhccCHHHHHhhCCCCcEEE
Confidence 6666666655555567777765
No 380
>PRK14337 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=34.82 E-value=3.3e+02 Score=24.20 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=52.4
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCc-cCCCh-hhhHHHHHHHHHHH---HhCCCCcEEEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNY-WREADDLRAVVQYF---CGANRAVGAILG 161 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-~~~~~-~~~~~d~~~~i~~l---~~~~~~~i~l~G 161 (318)
++++-+|+..+...-..+...|.+.||.+.. . ...+--. ...++ ....+.....+..+ +...++..+++|
T Consensus 6 ~~i~tlGC~~N~~dse~~~~~l~~~G~~~~~---~--~~ADiiiiNTC~v~~~A~~~~~~~i~~~~~~k~~~p~~~ivv~ 80 (446)
T PRK14337 6 FHIITFGCQMNVNDSDWLARALVARGFTEAP---E--EEARVFIVNTCSVRDKPEQKVYSLLGRIRHATKKNPDVFVAVG 80 (446)
T ss_pred EEEEeeCCCCcHHHHHHHHHHHHHCCCEECC---c--CCCCEEEEeccCeecHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 6777888877656667888999999997643 1 1111000 11111 22233444444333 333444456666
Q ss_pred EechHHHHHHHHhhcCCccEEEEe
Q 021050 162 HSKGGSVVLLYASKYNDIRTFVNV 185 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~v~~~v~~ 185 (318)
-++-....-.+....|+|+.++..
T Consensus 81 GC~a~~~~~~~~~~~p~vd~vv~~ 104 (446)
T PRK14337 81 GCVAQQIGSGFFSRFPQVRLVFGT 104 (446)
T ss_pred CCccccccHHHHhhCCCCcEEECC
Confidence 666555556666677888877643
No 381
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=34.71 E-value=46 Score=27.73 Aligned_cols=22 Identities=27% Similarity=0.229 Sum_probs=18.3
Q ss_pred CCCcEEEEEEechHHHHHHHHh
Q 021050 153 NRAVGAILGHSKGGSVVLLYAS 174 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~~a~ 174 (318)
+..+.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3667799999999999888665
No 382
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=34.68 E-value=55 Score=24.35 Aligned_cols=20 Identities=35% Similarity=0.383 Sum_probs=16.5
Q ss_pred EEEEEEechHHHHHHHHhhc
Q 021050 157 GAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~ 176 (318)
-.+.|-|.||.+|+.++...
T Consensus 29 d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 29 DVISGTSAGALNAALLALGY 48 (204)
T ss_dssp SEEEEECCHHHHHHHHHTC-
T ss_pred cEEEEcChhhhhHHHHHhCC
Confidence 47999999999998877763
No 383
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=34.68 E-value=58 Score=29.14 Aligned_cols=42 Identities=14% Similarity=0.280 Sum_probs=35.7
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
.+.|+||++-|+-+.+-......+...|..+|++|.++..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 467899999999887755677889999999999999998874
No 384
>COG4425 Predicted membrane protein [Function unknown]
Probab=34.59 E-value=1.4e+02 Score=26.24 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=23.6
Q ss_pred CCCcEEEEEEechHHHHHH-HHhhc---CCccEEEEeccCcc
Q 021050 153 NRAVGAILGHSKGGSVVLL-YASKY---NDIRTFVNVSGRYD 190 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a~~-~a~~~---p~v~~~v~~~~~~~ 190 (318)
...|+++.|.|+|++-... ....+ .+.+|+...+|++.
T Consensus 395 sRPKLylhG~SLGa~~s~~~s~dl~dvl~dfdGaLwSGppf~ 436 (588)
T COG4425 395 SRPKLYLHGESLGAMGSEAPSMDLFDVLGDFDGALWSGPPFN 436 (588)
T ss_pred CCCceEEeccccccccCccccccHHHHHhhcccceecCCCCC
Confidence 4458999999999876544 11111 22677776666544
No 385
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=34.43 E-value=3.3e+02 Score=24.10 Aligned_cols=70 Identities=16% Similarity=0.161 Sum_probs=37.9
Q ss_pred HHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC---ccE
Q 021050 105 AVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IRT 181 (318)
Q Consensus 105 ~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~ 181 (318)
.+.+...+|.++.+|.+|....+ ....+.+..+.+.+ .+..+++|--++-|.-+...|..+.+ +.+
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~d--------~~l~~eL~~i~~~~---~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~g 243 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQID--------EELMEELAAIKEIL---NPDEILLVVDAMTGQDAVNTAKTFNERLGLTG 243 (428)
T ss_pred HHHHHhcCCCEEEEeCCCccccC--------HHHHHHHHHHHHhh---CCceEEEEEeccchHHHHHHHHHHHhhCCCCE
Confidence 34445668999999999864321 11233343333333 34445666555555555555554432 666
Q ss_pred EEEe
Q 021050 182 FVNV 185 (318)
Q Consensus 182 ~v~~ 185 (318)
+|+.
T Consensus 244 iIlT 247 (428)
T TIGR00959 244 VVLT 247 (428)
T ss_pred EEEe
Confidence 6654
No 386
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=34.42 E-value=3.3e+02 Score=24.14 Aligned_cols=85 Identities=7% Similarity=0.013 Sum_probs=50.7
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCce----------EEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCc
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGIS----------AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAV 156 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~----------v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 156 (318)
|++..+|+..+...-..+...|.+.||. |+.+|-= .-.....+.+...|..+...+++.
T Consensus 5 v~i~T~GC~~N~~DSe~m~~~L~~~G~~~~~~~~~eADvviiNTC-----------~V~~~a~~k~~~~i~~~~~~~p~~ 73 (437)
T COG0621 5 VYIETLGCQMNLYDSERMAGLLEAAGYEELVEDPEEADVVIINTC-----------AVREKAEQKVRSAIGELKKLKPDA 73 (437)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHcCCccccCCcccCCEEEEecC-----------eeeehHHHHHHHHHHHHHHhCCCC
Confidence 5677777777555567788999888984 3333211 001222344555555555555555
Q ss_pred EEEEEEechHHHHHHHHhhcCCccEEE
Q 021050 157 GAILGHSKGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 157 i~l~G~S~Gg~~a~~~a~~~p~v~~~v 183 (318)
.++|+-|++-.- -....+.|.|+.++
T Consensus 74 ~iiVtGC~aq~~-~~i~~~~p~vd~v~ 99 (437)
T COG0621 74 KIIVTGCLAQAE-EEILERAPEVDIVL 99 (437)
T ss_pred EEEEeCCccccC-HHHHhhCCCceEEE
Confidence 677766776666 55556667777555
No 387
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=33.41 E-value=78 Score=25.07 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=25.7
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
|.+..+=||.+-+.....++..|+++|++|+.+|.--
T Consensus 3 i~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 3 ITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3444444444433556778999999999999999754
No 388
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=33.39 E-value=1.2e+02 Score=24.44 Aligned_cols=53 Identities=19% Similarity=0.104 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHHHhCCCCcEEEEEEechHHH-HHHHHhhcCCccEEEEeccCc
Q 021050 137 READDLRAVVQYFCGANRAVGAILGHSKGGSV-VLLYASKYNDIRTFVNVSGRY 189 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~-a~~~a~~~p~v~~~v~~~~~~ 189 (318)
...+|..++++.....+..++.++|.+....- ++.+|.++|.+-..+.+-|..
T Consensus 14 ~~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~ 67 (256)
T COG0084 14 EFDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD 67 (256)
T ss_pred hhcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc
Confidence 34567777888777778889999999999987 888899999877777777765
No 389
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=33.24 E-value=83 Score=25.08 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=26.8
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
+|.+..+-||..-+.....++..|++.|++|+.+|.--
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 34444544555433566788899999999999999853
No 390
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=33.24 E-value=96 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.060 Sum_probs=26.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
..|+++-|-|.|..+ -.-.++.|..+||.|.++-
T Consensus 61 ~~V~VlcG~GNNGGD--Glv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGD--GLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchh--HHHHHHHHHHCCCeEEEEE
Confidence 457788888888744 6678899999999987765
No 391
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=32.98 E-value=1.6e+02 Score=23.25 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=54.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCC--CcEEEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANR--AVGAILG 161 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~i~l~G 161 (318)
...+-.|=+... ...++.|.+.+..|+..|+-|-...-. ........++|....+..|...+. -+-+.+|
T Consensus 88 ~l~inaHvGfvd------E~~~eklk~~~vdvvsLDfvgDn~vIk--~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiG 159 (275)
T COG1856 88 GLLINAHVGFVD------ESDLEKLKEELVDVVSLDFVGDNDVIK--RVYKLPKSVEDYLRSLLLLKENGIRVVPHITIG 159 (275)
T ss_pred CeEEEEEeeecc------HHHHHHHHHhcCcEEEEeecCChHHHH--HHHcCCccHHHHHHHHHHHHHcCceeceeEEEE
Confidence 355556644433 234567777778999999875322111 111122237788888888877643 3457889
Q ss_pred EechHHH----HHHHHhhcCCccEEEEe
Q 021050 162 HSKGGSV----VLLYASKYNDIRTFVNV 185 (318)
Q Consensus 162 ~S~Gg~~----a~~~a~~~p~v~~~v~~ 185 (318)
.+.|+.- |+.+...++ .+++|+.
T Consensus 160 L~~gki~~e~kaIdiL~~~~-~DalVl~ 186 (275)
T COG1856 160 LDFGKIHGEFKAIDILVNYE-PDALVLV 186 (275)
T ss_pred eccCcccchHHHHHHHhcCC-CCeEEEE
Confidence 9999864 566555443 3444443
No 392
>PRK07667 uridine kinase; Provisional
Probab=32.95 E-value=94 Score=23.66 Aligned_cols=42 Identities=17% Similarity=0.297 Sum_probs=32.1
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN 123 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 123 (318)
..+.||.+-|..+++-+.....+.+.|.+.|..+..++...+
T Consensus 15 ~~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 15 ENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 345899999998888655667788888888888777776654
No 393
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=32.65 E-value=1.1e+02 Score=23.94 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=24.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+.+.-|+++|-|.+.+ +..|+++||.|+.+|+-
T Consensus 36 ~~~~rvLvPgCG~g~D-------~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 36 KPGGRVLVPGCGKGYD-------MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp STSEEEEETTTTTSCH-------HHHHHHTTEEEEEEES-
T ss_pred CCCCeEEEeCCCChHH-------HHHHHHCCCeEEEEecC
Confidence 3344577888887762 46778899999999985
No 394
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=32.54 E-value=1.1e+02 Score=24.89 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=29.6
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
...+|.+.-+-++.+-+.....++..+++.|.+|+.+|.-
T Consensus 102 ~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~D 141 (274)
T TIGR03029 102 GRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDAN 141 (274)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 4456666666665554456678899999999999999984
No 395
>PTZ00056 glutathione peroxidase; Provisional
Probab=32.53 E-value=1.8e+02 Score=22.36 Aligned_cols=60 Identities=8% Similarity=0.154 Sum_probs=34.0
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
-+++++..+|..+. +..-..+++||.+-+..+.... .....+.+.+.++|+.|++++..-
T Consensus 20 pdf~l~d~~G~~vs--L~~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~ 82 (199)
T PTZ00056 20 YDYTVKTLEGTTVP--MSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQ 82 (199)
T ss_pred CceEEECCCCCEEe--HHHhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchh
Confidence 55666767786655 2221245666666554433211 223445555666789999997653
No 396
>PLN02924 thymidylate kinase
Probab=32.33 E-value=1e+02 Score=24.24 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=32.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
+...+|.+=|..+++-+.....+.+.|..+|+.|+....|+
T Consensus 14 ~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 14 SRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 44567888888877755677889999999999998877775
No 397
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=32.24 E-value=59 Score=22.42 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHcCceEEEEcCC
Q 021050 100 SMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+...++.|+++|+.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4778999999999999999975
No 398
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=32.15 E-value=3.2e+02 Score=23.25 Aligned_cols=43 Identities=23% Similarity=0.304 Sum_probs=28.0
Q ss_pred EEEEEccC--CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCC
Q 021050 85 IVVLCHGF--RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEG 128 (318)
Q Consensus 85 ~vv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~ 128 (318)
+||.+-.. ||+.-+.....+++.|.++|+++..+. ||||....
T Consensus 57 PVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~ 101 (338)
T PRK01906 57 PVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVVS-RGYGAKIK 101 (338)
T ss_pred CEEEECCccCCCCChHHHHHHHHHHHHHcCCceEEEe-cCCCCCCC
Confidence 34554432 233323567788899999999886665 89987643
No 399
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.91 E-value=1.2e+02 Score=25.64 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=46.5
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
.++|.|+++=|..|..-+.....++.+|.+.|+.|+..--- +|. +..+..+-.|....+ +-++
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~D------------TFR--AaAiEQL~~w~er~g---v~vI 198 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGD------------TFR--AAAIEQLEVWGERLG---VPVI 198 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecc------------hHH--HHHHHHHHHHHHHhC---CeEE
Confidence 46799999999877775456788999999999999876421 222 333444444443324 5566
Q ss_pred EEechHHHH
Q 021050 161 GHSKGGSVV 169 (318)
Q Consensus 161 G~S~Gg~~a 169 (318)
.+..|+--|
T Consensus 199 ~~~~G~DpA 207 (340)
T COG0552 199 SGKEGADPA 207 (340)
T ss_pred ccCCCCCcH
Confidence 655776443
No 400
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=31.61 E-value=3.5e+02 Score=23.56 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=22.3
Q ss_pred eEEEEEccCCCCC-CChhHHHHHHHHHHcCceEEEEc
Q 021050 84 EIVVLCHGFRSTK-DDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 84 ~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
.++|+++-..... .+.....-...|.+.|+.|+-+.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~ 149 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD 149 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC
Confidence 4566666544332 12456677788888888776665
No 401
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=31.56 E-value=2.1e+02 Score=20.91 Aligned_cols=75 Identities=16% Similarity=0.094 Sum_probs=40.5
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCc-EEEEEEechHHHHHHHHhhcCCc
Q 021050 101 MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAV-GAILGHSKGGSVVLLYASKYNDI 179 (318)
Q Consensus 101 ~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~v 179 (318)
-..+.++|.++||.|+-+-. + ... ...+|.+.+..+...+ .....++ |.+.|...|- ..+|.+.|.|
T Consensus 15 K~~l~~~L~~~g~eV~D~G~--~---~~~-~~~dYpd~a~~va~~V---~~g~~~~GIliCGtGiG~---siaANK~~GI 82 (148)
T PRK05571 15 KEEIIEHLEELGHEVIDLGP--D---SYD-ASVDYPDYAKKVAEAV---VAGEADRGILICGTGIGM---SIAANKVKGI 82 (148)
T ss_pred HHHHHHHHHHCCCEEEEcCC--C---CCC-CCCCHHHHHHHHHHHH---HcCCCCEEEEEcCCcHHH---HHHHhcCCCe
Confidence 35678899999998854321 1 111 0135555555554444 3322233 3333444443 2336788888
Q ss_pred cEEEEecc
Q 021050 180 RTFVNVSG 187 (318)
Q Consensus 180 ~~~v~~~~ 187 (318)
++.+..++
T Consensus 83 RAA~~~d~ 90 (148)
T PRK05571 83 RAALCHDT 90 (148)
T ss_pred EEEEECCH
Confidence 88887664
No 402
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=31.53 E-value=49 Score=22.89 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=25.7
Q ss_pred cEEEEE-EechHHHHHHHHhhcCCccEEEEeccC
Q 021050 156 VGAILG-HSKGGSVVLLYASKYNDIRTFVNVSGR 188 (318)
Q Consensus 156 ~i~l~G-~S~Gg~~a~~~a~~~p~v~~~v~~~~~ 188 (318)
|+.|+| ..+.|.-.+.+...+|.+.-+.+.+..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~ 34 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSS 34 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEEST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeec
Confidence 588999 888898888888889987655555543
No 403
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=31.25 E-value=21 Score=26.24 Aligned_cols=15 Identities=13% Similarity=0.135 Sum_probs=10.5
Q ss_pred CCCcEEEEEEechHH
Q 021050 153 NRAVGAILGHSKGGS 167 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~ 167 (318)
.+++|.|+|.|++..
T Consensus 102 ~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 102 SPKKISLVGCSLADN 116 (157)
T ss_dssp -ESEEEEESSS-S-T
T ss_pred CCCEEEEEEecccCC
Confidence 467899999999887
No 404
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=31.11 E-value=27 Score=28.21 Aligned_cols=17 Identities=29% Similarity=0.194 Sum_probs=13.6
Q ss_pred CCCcEEEEEEechHHHH
Q 021050 153 NRAVGAILGHSKGGSVV 169 (318)
Q Consensus 153 ~~~~i~l~G~S~Gg~~a 169 (318)
+...|+++|||+|..=.
T Consensus 233 ~i~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDY 249 (270)
T ss_pred CCCEEEEEeCCCchhhH
Confidence 55789999999997543
No 405
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=31.10 E-value=2.3e+02 Score=25.55 Aligned_cols=23 Identities=17% Similarity=0.099 Sum_probs=16.3
Q ss_pred HHHHHHHHHcC-ceEEEEcCCCCC
Q 021050 102 VNLAVALQNEG-ISAFRFDFAGNG 124 (318)
Q Consensus 102 ~~~~~~l~~~G-~~v~~~d~~g~G 124 (318)
..++..|.+.| +.|-.+|.....
T Consensus 26 ~~lAa~L~~~G~~~V~iiD~~~~~ 49 (497)
T TIGR02026 26 AYIGGALLDAGYHDVTFLDAMTGP 49 (497)
T ss_pred HHHHHHHHhcCCcceEEecccccC
Confidence 45666777889 688888876443
No 406
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=31.00 E-value=2e+02 Score=21.43 Aligned_cols=59 Identities=8% Similarity=0.075 Sum_probs=37.3
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCC----CChhHHHHHHHHHHcCceEEEEcC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTK----DDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~----~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
-++++...||..+.-.-+. +++|+|+|+-.-.... ..--|+.-.+.+.+.|+.|+.+..
T Consensus 70 PD~tL~dedg~sisLkkit-~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS~ 132 (211)
T KOG0855|consen 70 PDFTLKDEDGKSISLKKIT-GNKPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLSG 132 (211)
T ss_pred CCcccccCCCCeeeeeeec-CCCcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeecc
Confidence 5677777788887754333 3447777775543322 112356667788888899987753
No 407
>cd02038 FleN-like FleN is a member of the Fer4_NifH superfamily. It shares the common function as an ATPase, with the ATP-binding domain at the N-terminus. In Pseudomonas aeruginosa, FleN gene is involved in regulating the number of flagella and chemotactic motility by influencing FleQ activity.
Probab=30.97 E-value=1.1e+02 Score=21.69 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=27.6
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN 123 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 123 (318)
|.+..+-|+..-+..-..++..++++|.+|+.+|.-..
T Consensus 2 i~~~~~kgg~gkt~~~~~~a~~~~~~~~~~~~vd~D~~ 39 (139)
T cd02038 2 IAVTSGKGGVGKTNISANLALALAKLGKRVLLLDADLG 39 (139)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 44555656555445667888999999999999997643
No 408
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=30.96 E-value=2.3e+02 Score=22.58 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=24.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
++++-|..+. .-..+++.|.++|+.|+..+...
T Consensus 11 ~vlItG~s~g----IG~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSG----IGLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCCh----HHHHHHHHHHHCCCEEEEEeCCc
Confidence 4556665543 36778999999999999988653
No 409
>PLN02204 diacylglycerol kinase
Probab=30.87 E-value=3.8e+02 Score=24.89 Aligned_cols=35 Identities=6% Similarity=0.153 Sum_probs=25.0
Q ss_pred CCeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEE
Q 021050 82 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAF 116 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~ 116 (318)
.+..+|++|..++.... ..|..+.+.|..+|+.+-
T Consensus 159 ~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~ 194 (601)
T PLN02204 159 PKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTK 194 (601)
T ss_pred CceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEE
Confidence 45678999987766532 457788888888876643
No 410
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=30.40 E-value=93 Score=20.50 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=21.4
Q ss_pred CCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 92 FRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 92 ~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
-|+...+.....++..++++|.+|+.+|.-
T Consensus 8 kgG~Gkst~~~~la~~~~~~~~~vl~~d~d 37 (104)
T cd02042 8 KGGVGKTTTAVNLAAALARRGKRVLLIDLD 37 (104)
T ss_pred CCCcCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 333333355677888898899999999864
No 411
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.40 E-value=3.1e+02 Score=22.92 Aligned_cols=38 Identities=16% Similarity=0.051 Sum_probs=25.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
..|.+-|-+.+-+...-..+.+.+.+.|+.|+..|---
T Consensus 203 ~gVvLaGrPYh~DpeiNhgI~e~i~~~g~~IlTedsI~ 240 (351)
T COG3580 203 KGVVLAGRPYHFDPEINHGIPEKINSRGIPILTEDSIP 240 (351)
T ss_pred eeEEEeCCccccCcccccchHHHHhhcCCeeeecccch
Confidence 34444444434433446678899999999999998654
No 412
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=30.32 E-value=2.2e+02 Score=21.99 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=29.1
Q ss_pred CeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 83 SEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
+.+|+++||-....-. .......+.|.+.|.++-...++|-|-+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE 199 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC
Confidence 4579999999877632 2356777888888888888888765433
No 413
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.31 E-value=79 Score=25.99 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=16.8
Q ss_pred EEEEEechHHHHHHHHhhc
Q 021050 158 AILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7889999999999998754
No 414
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=30.26 E-value=1.6e+02 Score=19.21 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=17.9
Q ss_pred EEEEEccCCCC-CCChhHHHHHHHHHHc
Q 021050 85 IVVLCHGFRST-KDDPSMVNLAVALQNE 111 (318)
Q Consensus 85 ~vv~~hG~~~~-~~~~~~~~~~~~l~~~ 111 (318)
.|+..||.... ........+++.+.++
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~ 29 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAES 29 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHH
Confidence 57888999875 3223566677777664
No 415
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=30.20 E-value=2.1e+02 Score=20.59 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=34.8
Q ss_pred EEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCCh---hHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 63 LVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDP---SMVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 63 v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~---~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
+++...+|..+. +..-..+++||..-...+..... ....+.+.+...|..+++++..-+|.++
T Consensus 5 f~l~~~~G~~~~--l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~~ 70 (153)
T TIGR02540 5 FEVKDARGRTVS--LEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESE 70 (153)
T ss_pred ceeECCCCCEec--HHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccCC
Confidence 455556776654 22222355555554444433222 2335666666678999999875555553
No 416
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=30.17 E-value=2.6e+02 Score=21.54 Aligned_cols=68 Identities=16% Similarity=0.137 Sum_probs=35.1
Q ss_pred CeEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC--CCCCCCCCccCCChhhhHHHHHHHHHHHH
Q 021050 83 SEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA--GNGESEGSFQYGNYWREADDLRAVVQYFC 150 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~--g~G~s~~~~~~~~~~~~~~d~~~~i~~l~ 150 (318)
..++++++|-...... .....+.+.|.+.|-.+-...|+ +||.........+-....+-...++++++
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 3467778886655422 12345777776666555555555 57776655443333333444555666663
No 417
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=30.15 E-value=2.4e+02 Score=21.18 Aligned_cols=72 Identities=10% Similarity=0.135 Sum_probs=40.0
Q ss_pred cCceEEEEcCCCCCCCCCCccCCChhhh---HHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCCccEEE
Q 021050 111 EGISAFRFDFAGNGESEGSFQYGNYWRE---ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 111 ~G~~v~~~d~~g~G~s~~~~~~~~~~~~---~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v 183 (318)
.|.+++.+..+.-......+....++.. .+.+..++..|++++..+=+|+|||--|-.... -.-.|++.-+.
T Consensus 19 ~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~GWGe~Lfl-kdv~P~a~li~ 93 (171)
T PF12000_consen 19 PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPGWGETLFL-KDVFPDAPLIG 93 (171)
T ss_pred CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCCcchhhhH-HHhCCCCcEEE
Confidence 4677777776322222222222233332 466777788888887777789999865543332 34457644443
No 418
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=30.07 E-value=3.1e+02 Score=22.43 Aligned_cols=70 Identities=10% Similarity=0.111 Sum_probs=41.2
Q ss_pred HHHHHH-cCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE-EEechHHHHHHHHhhcCC--cc
Q 021050 105 AVALQN-EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL-GHSKGGSVVLLYASKYND--IR 180 (318)
Q Consensus 105 ~~~l~~-~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~-G~S~Gg~~a~~~a~~~p~--v~ 180 (318)
.+.+.+ .++.++.+|.+|..... ....+.+.++++.. .+..++++ .-++++.-+...+..+.. ++
T Consensus 146 l~~l~~~~~~D~ViIDt~Gr~~~~--------~~~l~el~~~~~~~---~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~ 214 (270)
T PRK06731 146 LTYFKEEARVDYILIDTAGKNYRA--------SETVEEMIETMGQV---EPDYICLTLSASMKSKDMIEIITNFKDIHID 214 (270)
T ss_pred HHHHHhcCCCCEEEEECCCCCcCC--------HHHHHHHHHHHhhh---CCCeEEEEEcCccCHHHHHHHHHHhCCCCCC
Confidence 344443 36899999998764322 12234444444433 34445554 446777777777777655 78
Q ss_pred EEEEe
Q 021050 181 TFVNV 185 (318)
Q Consensus 181 ~~v~~ 185 (318)
++|+.
T Consensus 215 ~~I~T 219 (270)
T PRK06731 215 GIVFT 219 (270)
T ss_pred EEEEE
Confidence 88864
No 419
>PTZ00256 glutathione peroxidase; Provisional
Probab=29.88 E-value=2.4e+02 Score=21.18 Aligned_cols=58 Identities=12% Similarity=0.200 Sum_probs=31.8
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCC-CC----hhHHHHHHHHHHcCceEEEEcCC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTK-DD----PSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~-~~----~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
-+++++..+|..+. +..-..+++||++. +.... .. ..+..+.+.+.++|+.|+++...
T Consensus 21 p~f~l~d~~G~~vs--Ls~~~Gk~vvlv~n-~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~~ 83 (183)
T PTZ00256 21 FEFEAIDIDGQLVQ--LSKFKGKKAIIVVN-VACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCN 83 (183)
T ss_pred cceEeEcCCCCEEe--HHHhCCCcEEEEEE-ECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEecc
Confidence 55677777886655 22222445555444 32211 00 23445566667778999999754
No 420
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=29.66 E-value=2e+02 Score=25.37 Aligned_cols=45 Identities=13% Similarity=0.139 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEEEec
Q 021050 139 ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVS 186 (318)
Q Consensus 139 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~ 186 (318)
..+...+.+++.....++++++| ||.+++.+|....+ =..+.++.
T Consensus 133 ~~~~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~ 178 (438)
T PRK13512 133 LEDTDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIH 178 (438)
T ss_pred HHHHHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEe
Confidence 34455555555444557899999 67888887776543 12344444
No 421
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=29.66 E-value=1.8e+02 Score=24.71 Aligned_cols=65 Identities=15% Similarity=0.017 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCceEEEEcCCC------------CCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHH
Q 021050 102 VNLAVALQNEGISAFRFDFAG------------NGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVV 169 (318)
Q Consensus 102 ~~~~~~l~~~G~~v~~~d~~g------------~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a 169 (318)
..+.+.|.++|++|.++-+-- -=.|.++... ..+++....++.+. ..++=++|.|+|=.+.
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP----~~~~~~i~~ik~l~---~~~iPifGICLGHQll 263 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDP----APLDYAIETIKELL---GTKIPIFGICLGHQLL 263 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCCh----hHHHHHHHHHHHHh---ccCCCeEEEcHHHHHH
Confidence 467889999999998876542 2223333322 22344444444442 2234789999998876
Q ss_pred HHHH
Q 021050 170 LLYA 173 (318)
Q Consensus 170 ~~~a 173 (318)
.++.
T Consensus 264 alA~ 267 (368)
T COG0505 264 ALAL 267 (368)
T ss_pred HHhc
Confidence 6543
No 422
>PRK09936 hypothetical protein; Provisional
Probab=29.65 E-value=2e+02 Score=23.78 Aligned_cols=29 Identities=14% Similarity=0.303 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 99 PSMVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
..|..+.+.+...|++.+.+-+-++|.++
T Consensus 38 ~qWq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 38 TQWQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred HHHHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 56889999999999999999999999884
No 423
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=29.54 E-value=2.2e+02 Score=20.48 Aligned_cols=58 Identities=16% Similarity=0.253 Sum_probs=32.5
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCC----ChhHHHHHHHHHHcCceEEEEcC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKD----DPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~----~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
-++.+.+.+|..+. +..-..+++||++-+...... ...+..+.+.+.+.|..++.+..
T Consensus 11 p~f~l~~~~G~~~~--l~~~~gk~~ll~f~~~~~~p~C~~~~~~l~~~~~~~~~~~v~vi~Is~ 72 (154)
T PRK09437 11 PKFSLPDQDGEQVS--LTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVVVLGIST 72 (154)
T ss_pred CCcEeeCCCCCEEe--HHHhCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 34566666776554 222223566666654322221 12345566777778899999963
No 424
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=29.38 E-value=2e+02 Score=19.98 Aligned_cols=28 Identities=14% Similarity=0.343 Sum_probs=18.0
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHc
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNE 111 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~ 111 (318)
..|++-||.........+..+++.+.++
T Consensus 3 ~lvlv~hGS~~~~~~~~~~~~~~~l~~~ 30 (126)
T PRK00923 3 GLLLVGHGSRLPYNKEVVTKIAEKIKEK 30 (126)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHh
Confidence 4677889987533223566777777654
No 425
>PRK10867 signal recognition particle protein; Provisional
Probab=29.32 E-value=4.1e+02 Score=23.59 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=36.0
Q ss_pred HHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC---ccEE
Q 021050 106 VALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IRTF 182 (318)
Q Consensus 106 ~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~ 182 (318)
+.....+|.++.+|-+|....+ ....+.+..+.+.+ .+..++++--++-|.-+...|..+.+ +.++
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~d--------~~lm~eL~~i~~~v---~p~evllVlda~~gq~av~~a~~F~~~~~i~gi 245 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHID--------EELMDELKAIKAAV---NPDEILLVVDAMTGQDAVNTAKAFNEALGLTGV 245 (433)
T ss_pred HHHHhcCCCEEEEeCCCCcccC--------HHHHHHHHHHHHhh---CCCeEEEEEecccHHHHHHHHHHHHhhCCCCEE
Confidence 3444567999999999864321 11233333333333 33445555555555555555554332 5666
Q ss_pred EE
Q 021050 183 VN 184 (318)
Q Consensus 183 v~ 184 (318)
|+
T Consensus 246 Il 247 (433)
T PRK10867 246 IL 247 (433)
T ss_pred EE
Confidence 65
No 426
>PRK13768 GTPase; Provisional
Probab=29.31 E-value=85 Score=25.23 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=27.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
-++++-|.+|.+-+.....++..+...|.+|+.+|.
T Consensus 3 ~~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 3 YIVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 356666777666545677888899888999999875
No 427
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=29.29 E-value=1.2e+02 Score=26.56 Aligned_cols=41 Identities=12% Similarity=0.183 Sum_probs=27.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
.+|.+...=||.+-+.....++..|+..|++|+++|+--.|
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~ 162 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 34444443344443345677889999999999999986544
No 428
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=29.16 E-value=1.7e+02 Score=19.21 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=18.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHc
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNE 111 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~ 111 (318)
.|++-||.........+..+++.+.++
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 577789987643223577788888665
No 429
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=28.92 E-value=1.1e+02 Score=20.74 Aligned_cols=58 Identities=12% Similarity=0.227 Sum_probs=33.0
Q ss_pred eEEEEeCCCCcEEEEEEecCCCCeEEEEEccCCCCCCC----hhHHHHHHHHHHcCceEEEEcC
Q 021050 61 QELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDD----PSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 61 ~~v~~~~~~g~~l~~~~~~~~~~~~vv~~hG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
-++++++.+|..+. +..-.++++||++-........ ..+..+.+.+.+.|+.++++..
T Consensus 6 P~f~l~~~~g~~~~--l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 6 PDFTLTDSDGKTVS--LSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp GCEEEETTTSEEEE--GGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCcEeECCCCCEEE--HHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 34667777776665 3332456777776555222211 1223344555666899999885
No 430
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=28.86 E-value=3.2e+02 Score=22.27 Aligned_cols=32 Identities=22% Similarity=0.134 Sum_probs=24.5
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
-+++-|..+.. -..+++.|+++||+++.+-.+
T Consensus 8 ~~lITGASsGI----G~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 8 TALITGASSGI----GAELAKQLARRGYNLILVARR 39 (265)
T ss_pred EEEEECCCchH----HHHHHHHHHHCCCEEEEEeCc
Confidence 34555555443 678999999999999999876
No 431
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=28.85 E-value=2e+02 Score=19.96 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=11.7
Q ss_pred HHHHHHHcCceEEEE
Q 021050 104 LAVALQNEGISAFRF 118 (318)
Q Consensus 104 ~~~~l~~~G~~v~~~ 118 (318)
-.+.|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 456778889999876
No 432
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=28.70 E-value=3.2e+02 Score=22.26 Aligned_cols=70 Identities=14% Similarity=0.164 Sum_probs=38.3
Q ss_pred HHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHH---hCCCCcEEEEEEechHHHHHHHHhhcCC---ccE
Q 021050 108 LQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC---GANRAVGAILGHSKGGSVVLLYASKYND---IRT 181 (318)
Q Consensus 108 l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~---~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~ 181 (318)
+..++|.++.+|-+|....+ ....+++..+.+.+. ......++++--+.-|.-++..+..+-+ +.+
T Consensus 150 ~~~~~~D~ViIDT~G~~~~d--------~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g 221 (272)
T TIGR00064 150 AKARNIDVVLIDTAGRLQNK--------VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTG 221 (272)
T ss_pred HHHCCCCEEEEeCCCCCcch--------HHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCE
Confidence 34568999999999875422 222444555554442 1124445666555555545444444322 677
Q ss_pred EEEe
Q 021050 182 FVNV 185 (318)
Q Consensus 182 ~v~~ 185 (318)
+|+.
T Consensus 222 ~IlT 225 (272)
T TIGR00064 222 IILT 225 (272)
T ss_pred EEEE
Confidence 7764
No 433
>PTZ00062 glutaredoxin; Provisional
Probab=28.61 E-value=2.8e+02 Score=21.52 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=52.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 160 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 160 (318)
+.|+|||..|........+.....+.|.+.|.....+|... + .++.+.+..+... -...+.+=
T Consensus 112 ~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~-----------d-----~~~~~~l~~~sg~~TvPqVfI~ 175 (204)
T PTZ00062 112 NHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFE-----------D-----PDLREELKVYSNWPTYPQLYVN 175 (204)
T ss_pred cCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCC-----------C-----HHHHHHHHHHhCCCCCCeEEEC
Confidence 57899999997765544566777788888777766666540 1 1233333333222 33457777
Q ss_pred EEechHHHHHHHHhhcCCcc
Q 021050 161 GHSKGGSVVLLYASKYNDIR 180 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~v~ 180 (318)
|--.||.--+.-+.+..+++
T Consensus 176 G~~IGG~d~l~~l~~~G~L~ 195 (204)
T PTZ00062 176 GELIGGHDIIKELYESNSLR 195 (204)
T ss_pred CEEEcChHHHHHHHHcCChh
Confidence 88899998777665554443
No 434
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=28.34 E-value=87 Score=25.26 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=25.1
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 91 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 91 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
|=||..-+.....++..|+++|++|+++|.--.|
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~ 40 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKH 40 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 5444443345678899999999999999986443
No 435
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=28.31 E-value=2.1e+02 Score=22.88 Aligned_cols=33 Identities=24% Similarity=0.054 Sum_probs=27.7
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
-|+++-|..+.- -...++.|.+.|+.|+....|
T Consensus 7 kv~lITGASSGi----G~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 7 KVALITGASSGI----GEATARALAEAGAKVVLAARR 39 (246)
T ss_pred cEEEEecCcchH----HHHHHHHHHHCCCeEEEEecc
Confidence 577888877654 678999999999999999987
No 436
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=28.19 E-value=3.9e+02 Score=23.21 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=46.4
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEe
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 163 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 163 (318)
-.|++.--++.+. ...+.+++.|.+.|..|..+++. ..|..++++.+ ...+-+++|.+
T Consensus 249 V~l~Y~smyg~T~--~ma~aiaegl~~~gv~v~~~~~~-----------------~~~~~eI~~~i---~~a~~~vvGsP 306 (388)
T COG0426 249 VDLIYDSMYGNTE--KMAQAIAEGLMKEGVDVEVINLE-----------------DADPSEIVEEI---LDAKGLVVGSP 306 (388)
T ss_pred EEEEEecccCCHH--HHHHHHHHHhhhcCCceEEEEcc-----------------cCCHHHHHHHH---hhcceEEEecC
Confidence 4455544455554 57888999999999999999986 11334444444 22346888888
Q ss_pred ---------chHHHHHHHHhhcCC
Q 021050 164 ---------KGGSVVLLYASKYND 178 (318)
Q Consensus 164 ---------~Gg~~a~~~a~~~p~ 178 (318)
++..+....+...++
T Consensus 307 T~~~~~~p~i~~~l~~v~~~~~~~ 330 (388)
T COG0426 307 TINGGAHPPIQTALGYVLALAPKN 330 (388)
T ss_pred cccCCCCchHHHHHHHHHhccCcC
Confidence 456666666655554
No 437
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=28.18 E-value=3.2e+02 Score=22.83 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=21.9
Q ss_pred CeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcC
Q 021050 83 SEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDF 120 (318)
Q Consensus 83 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~ 120 (318)
.+.+|++-|-.+++ -..++..|+++ +..++..|-
T Consensus 3 ~~~~i~i~GptgsG----Kt~la~~la~~~~~~iis~Ds 37 (307)
T PRK00091 3 KPKVIVIVGPTASG----KTALAIELAKRLNGEIISADS 37 (307)
T ss_pred CceEEEEECCCCcC----HHHHHHHHHHhCCCcEEeccc
Confidence 34678888887777 34455555554 566777765
No 438
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.10 E-value=62 Score=28.44 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCCccCcchhHHHHhhCCCCEEEEECCCCccC
Q 021050 250 CSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY 290 (318)
Q Consensus 250 ~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 290 (318)
..++++.|+.|++........ .-......+++|++|+.
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCS 414 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeec
Confidence 479999999999976552221 12345567899999994
No 439
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=27.88 E-value=2.9e+02 Score=21.47 Aligned_cols=32 Identities=22% Similarity=0.108 Sum_probs=24.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
+..+.|.+... -+.++..|+++|++|++.|+.
T Consensus 16 ~~~vtGg~sGI----GrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 16 VAAVTGGSSGI----GRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred eeEEecCCchH----HHHHHHHHHhcCcEEEEeecc
Confidence 44455544433 678899999999999999876
No 440
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=27.80 E-value=2.5e+02 Score=21.22 Aligned_cols=25 Identities=12% Similarity=0.007 Sum_probs=13.2
Q ss_pred hhhHHHHHHHHHHHHhCC-CCcEEEE
Q 021050 136 WREADDLRAVVQYFCGAN-RAVGAIL 160 (318)
Q Consensus 136 ~~~~~d~~~~i~~l~~~~-~~~i~l~ 160 (318)
....+-+..+++.+++.. ..+|+++
T Consensus 74 ~~~~~~~~~fv~~iR~~hP~tPIllv 99 (178)
T PF14606_consen 74 EEFRERLDGFVKTIREAHPDTPILLV 99 (178)
T ss_dssp TTHHHHHHHHHHHHHTT-SSS-EEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 344566666677666653 3345444
No 441
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=27.78 E-value=3.7e+02 Score=22.62 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=24.6
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
.++...|.|++- .....+++.|.+.||.|..+-..+
T Consensus 4 i~i~~~g~gG~~--~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 4 ILLAGGGTGGHV--FPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEEcCcchHhh--hHHHHHHHHHHhCCCEEEEEECCC
Confidence 344445566554 456689999999999988775543
No 442
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=27.76 E-value=96 Score=26.68 Aligned_cols=18 Identities=22% Similarity=0.361 Sum_probs=16.2
Q ss_pred EEEEEechHHHHHHHHhh
Q 021050 158 AILGHSKGGSVVLLYASK 175 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~ 175 (318)
.++|-|.|+.++..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 599999999999988875
No 443
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=27.73 E-value=1.9e+02 Score=19.37 Aligned_cols=60 Identities=20% Similarity=0.237 Sum_probs=34.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCc-eEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEE
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 160 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 160 (318)
..|++-||...... ..+..+...+.+++. .|..--+ + .. . ++.++++.+...+.++|.++
T Consensus 2 ~illvgHGSr~~~~-~~~~~l~~~l~~~~~~~v~~~~l----E--~~---P-------~i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 2 AVVFMGHGTDHPSN-AVYAALEYVLREEDPANVFVGTV----E--GY---P-------GLDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred eEEEEECCCCchhh-hHHHHHHHHHHhcCCCcEEEEEE----c--CC---C-------CHHHHHHHHHHcCCCEEEEE
Confidence 46777799887653 568888888876542 2221111 1 01 1 23455666656577777776
No 444
>PTZ00445 p36-lilke protein; Provisional
Probab=27.64 E-value=3e+02 Score=21.58 Aligned_cols=65 Identities=15% Similarity=0.056 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCC------CCCCCCc-cCCC-hhhhHHHHHHHHHHHHhCCCCcEEEEEEech
Q 021050 100 SMVNLAVALQNEGISAFRFDFAGN------GESEGSF-QYGN-YWREADDLRAVVQYFCGANRAVGAILGHSKG 165 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~g~------G~s~~~~-~~~~-~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 165 (318)
....+.+.|.+.|+.+++.|+-.. |....+. .... ......++..++..+.+.+. +++|+-+|--
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I-~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI-KISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC-eEEEEEccch
Confidence 456788999999999999998642 1111111 0000 11124567777777765443 6899999854
No 445
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=27.53 E-value=1.2e+02 Score=25.60 Aligned_cols=44 Identities=23% Similarity=0.272 Sum_probs=29.8
Q ss_pred EEEEEccC--CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC
Q 021050 85 IVVLCHGF--RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS 129 (318)
Q Consensus 85 ~vv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~ 129 (318)
+||.+-.. ||+.-+.....+++.|.++|+++..+. ||||.....
T Consensus 36 pVIsVGNltvGGTGKTP~v~~L~~~L~~~G~~~~IlS-RGYg~~~~~ 81 (326)
T PF02606_consen 36 PVISVGNLTVGGTGKTPLVIWLARLLQARGYRPAILS-RGYGRKSKG 81 (326)
T ss_pred cEEEEcccccCCCCchHHHHHHHHHHHhcCCceEEEc-CCCCCCCCC
Confidence 35554432 233333677889999999999977776 799876543
No 446
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=27.48 E-value=76 Score=25.86 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=26.7
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
++|++-|+++++-+.....+.+.|.+.++.|..++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 4788899999886556778888888889999998855444
No 447
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=27.43 E-value=1.2e+02 Score=26.89 Aligned_cols=40 Identities=10% Similarity=0.154 Sum_probs=31.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
..|.+|++-|..|..-+.....++..|.+.|+.|..++.-
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D 132 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAAD 132 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCC
Confidence 4577888889888775556778888898889999888764
No 448
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=27.39 E-value=1.2e+02 Score=26.17 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=28.2
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 84 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 84 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
.+|.+...=||.+-+.....++..|+..|++|+++|.-..+
T Consensus 105 ~vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~DpQ~ 145 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDLDPQA 145 (387)
T ss_pred eEEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEecCCCC
Confidence 34445555455443345677888999999999999986544
No 449
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=27.31 E-value=1.2e+02 Score=24.53 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=27.5
Q ss_pred ccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 90 HGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 90 hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
-|=||..-+.....++..|+++|++|+.+|.--.|..
T Consensus 6 ~gKGGVGKTT~a~nLA~~La~~G~~VlliD~D~q~~~ 42 (275)
T TIGR01287 6 YGKGGIGKSTTTQNIAAALAEMGKKVMIVGCDPKADS 42 (275)
T ss_pred eCCCcCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 3655555445677899999999999999998655443
No 450
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=27.27 E-value=3.1e+02 Score=22.50 Aligned_cols=66 Identities=15% Similarity=-0.109 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEech
Q 021050 99 PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 165 (318)
Q Consensus 99 ~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 165 (318)
.....++..-++.|+.-+.+|--=.+..........-..-..|+.++++|.++++. .|.|+.||-+
T Consensus 32 ~~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgV-gi~lw~~~~~ 97 (273)
T PF10566_consen 32 ETQKRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGV-GIWLWYHSET 97 (273)
T ss_dssp HHHHHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT--EEEEEEECCH
T ss_pred HHHHHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 34677788888999998998853322110000000111124799999999988754 4899999988
No 451
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=27.21 E-value=3.7e+02 Score=22.39 Aligned_cols=93 Identities=16% Similarity=0.103 Sum_probs=59.0
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccC--------------------CChhhhHHHHHH
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY--------------------GNYWREADDLRA 144 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~--------------------~~~~~~~~d~~~ 144 (318)
..|++-|.+.++.+ ....++......|..++.+|..-.+........ ..-...+.--.+
T Consensus 3 krIyVvgT~DTKg~-EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A 81 (401)
T COG5441 3 KRIYVVGTADTKGE-ELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEA 81 (401)
T ss_pred ceEEEEecCCCcch-hHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHH
Confidence 45777788877763 567788888888999999997542211100000 000111223345
Q ss_pred HHHHHHhC-CCCcEEEEEEechHHHHHHHHhhcCC
Q 021050 145 VVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND 178 (318)
Q Consensus 145 ~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~ 178 (318)
+.+++.++ +..-++-+|-|.|..++.-.+...|-
T Consensus 82 ~~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPl 116 (401)
T COG5441 82 FVRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPL 116 (401)
T ss_pred HHHHhhcccchhheeecCCCcchHhhhhHHHhcCc
Confidence 66777666 45567778899999998888888876
No 452
>TIGR01574 miaB-methiolase tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB. Hits to this model span all major groups of bacteria and eukaryotes, but not archaea, which are known to lack this particular tRNA modification. The enzyme from Thermotoga maritima has been cloned, expressed, spectroscopically characterized and shown to complement the E. coli MiaB enzyme.
Probab=27.21 E-value=4.4e+02 Score=23.31 Aligned_cols=93 Identities=5% Similarity=-0.058 Sum_probs=49.1
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCC-ccCCCh-hhhHHHHHHHH---HHHHhCCCCcEEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVV---QYFCGANRAVGAIL 160 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~s~~~-~~~~~~-~~~~~d~~~~i---~~l~~~~~~~i~l~ 160 (318)
++++.+|+..+...-..+...|.++ ||.+... .- .++-- -...++ ......+...| +.++..++...+++
T Consensus 2 ~~i~t~GC~~N~~dse~~~~~l~~~~G~~~~~~-~~---~aDv~iiNTC~v~~~a~~k~~~~i~~~~~~k~~~~~~~ivv 77 (438)
T TIGR01574 2 LFIQTYGCQMNVRDSEHMAALLTAKEGYALTED-AK---EADVLLINTCSVREKAEHKVFGELGGFKKLKKKNPDLIIGV 77 (438)
T ss_pred eEEEeCCCCCcHHHHHHHHHHHHhcCCcEECCC-cc---cCCEEEEeccCeechHHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 5677788877655667888999888 8866531 10 11100 001111 12223334444 33333334445656
Q ss_pred EEechHHHHHHHHhhcCCccEEE
Q 021050 161 GHSKGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~v~~~v 183 (318)
|-++.-...-.+....|+|+.++
T Consensus 78 ~GC~a~~~~~~~~~~~~~vd~v~ 100 (438)
T TIGR01574 78 CGCMASHLGNEIFQRAPYVDFVF 100 (438)
T ss_pred eCccccccHHHHHhcCCCCcEEE
Confidence 65665555555555567777776
No 453
>PLN02840 tRNA dimethylallyltransferase
Probab=27.13 E-value=4.4e+02 Score=23.27 Aligned_cols=76 Identities=20% Similarity=0.144 Sum_probs=42.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcC----CCC--CCCCC-----------------CccCCChhh
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDF----AGN--GESEG-----------------SFQYGNYWR 137 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~----~g~--G~s~~-----------------~~~~~~~~~ 137 (318)
....+|++-|..+++- ..++..|+++ +..++..|- +|. |.... +....+...
T Consensus 19 ~~~~vi~I~GptgsGK----Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~ 94 (421)
T PLN02840 19 KKEKVIVISGPTGAGK----SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGA 94 (421)
T ss_pred cCCeEEEEECCCCCCH----HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHH
Confidence 3445777777777662 3444555444 445777774 332 22211 112234566
Q ss_pred hHHHHHHHHHHHHhCCCCcEEEEEE
Q 021050 138 EADDLRAVVQYFCGANRAVGAILGH 162 (318)
Q Consensus 138 ~~~d~~~~i~~l~~~~~~~i~l~G~ 162 (318)
+.++...+++.+..++.-+ +|+|-
T Consensus 95 F~~~A~~~I~~i~~rgkiP-IvVGG 118 (421)
T PLN02840 95 FFDDARRATQDILNRGRVP-IVAGG 118 (421)
T ss_pred HHHHHHHHHHHHHhcCCCE-EEEcC
Confidence 6788888898887765444 55543
No 454
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.90 E-value=56 Score=27.70 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=16.0
Q ss_pred EEEEEechHHHHHHHHhh
Q 021050 158 AILGHSKGGSVVLLYASK 175 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~ 175 (318)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 688999999999998864
No 455
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=26.88 E-value=47 Score=23.34 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=24.1
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
++...|.+|+- ..+..+++.|.++|+.|...-.+
T Consensus 2 li~~~Gt~Ghv--~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHV--YPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHH--HHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHH--HHHHHHHHHHhccCCeEEEeecc
Confidence 45555666666 66788999999999999765444
No 456
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=26.70 E-value=85 Score=26.30 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=23.6
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
|++++.+.+........+++.|.++||.|..+-.
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~ 35 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGT 35 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 4566655554334556899999999999977743
No 457
>PHA02518 ParA-like protein; Provisional
Probab=26.47 E-value=1.6e+02 Score=22.38 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=26.5
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
|.+...=||.+-+.....++..|+++|++|+.+|.--.+
T Consensus 3 i~v~~~KGGvGKTT~a~~la~~la~~g~~vlliD~D~q~ 41 (211)
T PHA02518 3 IAVLNQKGGAGKTTVATNLASWLHADGHKVLLVDLDPQG 41 (211)
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 334444344443345677888999999999999986544
No 458
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=26.45 E-value=1.3e+02 Score=24.13 Aligned_cols=40 Identities=18% Similarity=0.241 Sum_probs=28.7
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
|.+. |=||.+-+.....++..|+++|++|+++|.--.|.+
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n~ 43 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKADS 43 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCCc
Confidence 4444 555554335677899999999999999998755543
No 459
>PRK13973 thymidylate kinase; Provisional
Probab=26.39 E-value=1.5e+02 Score=22.96 Aligned_cols=38 Identities=16% Similarity=0.140 Sum_probs=30.6
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
.+|.+=|..+++-+.....+++.|..+|+.|+....||
T Consensus 4 ~~IviEG~dGsGKtTq~~~l~~~l~~~g~~~~~~~~p~ 41 (213)
T PRK13973 4 RFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPG 41 (213)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 46666787777655567889999999999999998887
No 460
>PRK13236 nitrogenase reductase; Reviewed
Probab=26.25 E-value=1.3e+02 Score=24.82 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=30.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
+|-+.|=||..-+.....++..|++.|++|+.+|.--.|.+.
T Consensus 8 ~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~D~q~~~~ 49 (296)
T PRK13236 8 QIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGCDPKADST 49 (296)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEccCCCCcc
Confidence 344466555554455678899999999999999986555443
No 461
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=26.19 E-value=1.1e+02 Score=25.35 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=25.1
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC
Q 021050 91 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN 123 (318)
Q Consensus 91 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 123 (318)
|=||..-+.....++..|+++|++|+.+|.--.
T Consensus 7 gKGGvGKTT~a~nLA~~La~~g~rVLlID~Dpq 39 (296)
T TIGR02016 7 GKGGSGKSFTTTNLSHMMAEMGKRVLQLGCDPK 39 (296)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCeEEEEEecCC
Confidence 655555445677899999999999999998533
No 462
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=26.11 E-value=4e+02 Score=22.42 Aligned_cols=68 Identities=13% Similarity=0.177 Sum_probs=39.0
Q ss_pred HcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHH---hCCCCcEEEEEEechHHHHHHHHhhcCC---ccEEE
Q 021050 110 NEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC---GANRAVGAILGHSKGGSVVLLYASKYND---IRTFV 183 (318)
Q Consensus 110 ~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~---~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v 183 (318)
.++|.++.+|-+|..... ....+.+..+.+.+. ...+..++++-.+.-|.-++.-+..+-+ +.++|
T Consensus 194 ~~~~D~ViIDTaGr~~~~--------~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~~giI 265 (318)
T PRK10416 194 ARGIDVLIIDTAGRLHNK--------TNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGLTGII 265 (318)
T ss_pred hCCCCEEEEeCCCCCcCC--------HHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCCCEEE
Confidence 467999999999864332 122334444444332 2234456777777777766665555422 66777
Q ss_pred Ee
Q 021050 184 NV 185 (318)
Q Consensus 184 ~~ 185 (318)
+-
T Consensus 266 lT 267 (318)
T PRK10416 266 LT 267 (318)
T ss_pred EE
Confidence 54
No 463
>PRK09072 short chain dehydrogenase; Provisional
Probab=26.10 E-value=1.2e+02 Score=24.22 Aligned_cols=32 Identities=25% Similarity=0.119 Sum_probs=24.2
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+++.|..+. .-..+++.|.++|+.|++++.+
T Consensus 7 ~vlItG~s~~----iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGG----IGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCch----HHHHHHHHHHHCCCEEEEEECC
Confidence 4666666553 4678899999999999999854
No 464
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=26.09 E-value=2.1e+02 Score=19.25 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=44.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcC-ceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC-CCCcEEE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEG-ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAI 159 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l 159 (318)
++|+|+|+-|.......-+-...++.|...| -....+|..- -+++.+-+...... -...+.+
T Consensus 14 ~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~----------------d~eiR~~lk~~s~WPT~PQLyi 77 (105)
T COG0278 14 ENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQ----------------DPEIRQGLKEYSNWPTFPQLYV 77 (105)
T ss_pred cCceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeEEeecc----------------CHHHHhccHhhcCCCCCceeeE
Confidence 6799999999987776556677888888877 4455555430 13444444433322 2345666
Q ss_pred EEEechHHHHH
Q 021050 160 LGHSKGGSVVL 170 (318)
Q Consensus 160 ~G~S~Gg~~a~ 170 (318)
=|-=.||.-.+
T Consensus 78 ~GEfvGG~DIv 88 (105)
T COG0278 78 NGEFVGGCDIV 88 (105)
T ss_pred CCEEeccHHHH
Confidence 66666665433
No 465
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=26.06 E-value=61 Score=26.46 Aligned_cols=31 Identities=13% Similarity=0.335 Sum_probs=23.9
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.-|.|+|..|.++. .+.|+..||.|+..|+.
T Consensus 251 ~vPmi~fakG~g~~---------Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 251 PVPMILFAKGSGGA---------LEELAQTGYDVVGLDWT 281 (359)
T ss_pred CCceEEEEcCcchH---------HHHHHhcCCcEEeeccc
Confidence 34788888776643 46778889999999985
No 466
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=25.90 E-value=1.6e+02 Score=20.49 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=19.4
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
...++||++...+..+ ...+..|...||.|..+|
T Consensus 85 ~~~~vvvyC~~~G~rs-----~~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRS-----QSLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccH-----HHHHHHHHHcCCceeEeC
Confidence 4567888885333222 223355566699866554
No 467
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=25.89 E-value=5e+02 Score=23.48 Aligned_cols=62 Identities=6% Similarity=-0.050 Sum_probs=37.8
Q ss_pred CChhhhHHHHHHHHHHHHhCC--CCcEEEEEEechHHHHHHHHhhc---CCccEEEEeccCccccch
Q 021050 133 GNYWREADDLRAVVQYFCGAN--RAVGAILGHSKGGSVVLLYASKY---NDIRTFVNVSGRYDLKGG 194 (318)
Q Consensus 133 ~~~~~~~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~~---p~v~~~v~~~~~~~~~~~ 194 (318)
....+..++...+++.|...+ +-+|+..|.-.-.--+..+..+. ++++++|+.-..+.....
T Consensus 16 ~~l~~~~~~~~~i~~~l~~~~~~~~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs~a~~ 82 (484)
T cd03557 16 EALKQVAAHSREIVDGLNASGKLPVKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFSPAKM 82 (484)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCchHHH
Confidence 345555667777777775432 23566666655555555555553 449999988876665433
No 468
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.
Probab=25.87 E-value=92 Score=22.50 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=24.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
||++-|..++.-+.....+.+.+...|+.++.+|
T Consensus 1 ~i~i~G~~GsGKSTla~~L~~~l~~~g~~~~~i~ 34 (149)
T cd02027 1 VIWLTGLSGSGKSTIARALEEKLFQRGRPVYVLD 34 (149)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 4677788877755566677777777787777775
No 469
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=25.76 E-value=4.2e+02 Score=22.61 Aligned_cols=75 Identities=13% Similarity=0.030 Sum_probs=45.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEech
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 165 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 165 (318)
.++++|...+. .....+++.+...+..|=.+.|--.|.+.-.. .+ .+.+.++.+.+...+. -+.+..|.|
T Consensus 260 y~LIpGvNDs~--e~a~~La~~l~~l~~~VnLIPynp~~~~~~~~--ps----~e~i~~f~~~L~~~Gi--~vtvR~~~G 329 (345)
T PRK14457 260 YILLGGVNDLP--EHAEELANLLRGFQSHVNLIPYNPIDEVEFQR--PS----PKRIQAFQRVLEQRGV--AVSVRASRG 329 (345)
T ss_pred EEEECCcCCCH--HHHHHHHHHHhcCCCeEEEecCCCCCCCCCCC--CC----HHHHHHHHHHHHHCCC--eEEEeCCCC
Confidence 67899998887 45788888886654444444443233332211 12 4456666666655554 366789998
Q ss_pred HHHHH
Q 021050 166 GSVVL 170 (318)
Q Consensus 166 g~~a~ 170 (318)
.-+..
T Consensus 330 ~di~a 334 (345)
T PRK14457 330 LDANA 334 (345)
T ss_pred Cchhh
Confidence 76543
No 470
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=25.65 E-value=1.9e+02 Score=25.16 Aligned_cols=42 Identities=17% Similarity=0.092 Sum_probs=27.4
Q ss_pred eEEEEEc-cCCCCCCChhHHHHHHHHHHcCceEEEEcC-CCCCC
Q 021050 84 EIVVLCH-GFRSTKDDPSMVNLAVALQNEGISAFRFDF-AGNGE 125 (318)
Q Consensus 84 ~~vv~~h-G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~-~g~G~ 125 (318)
+.||.+- .=||.+-+.....++..|+.+|++|+++|+ -..|.
T Consensus 106 ~~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~n 149 (387)
T PHA02519 106 PVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGT 149 (387)
T ss_pred ceEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCC
Confidence 4444443 333333224567788899999999999995 65554
No 471
>PRK14333 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=25.63 E-value=4.8e+02 Score=23.19 Aligned_cols=94 Identities=5% Similarity=-0.041 Sum_probs=51.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-ccCCCh-hhhHHHHHHHHHHH---HhCCCCcEEEE
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVVQYF---CGANRAVGAIL 160 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~-~~~~~~-~~~~~d~~~~i~~l---~~~~~~~i~l~ 160 (318)
=++++-+|+..+...-..+...|.+.||.++-. + ..++-- -...++ ..........+..+ +...++..+++
T Consensus 8 ~~~i~t~GC~~N~~ds~~~~~~l~~~G~~~~~~--~--~~ADiiiiNTC~v~~~a~~~~~~~i~~~~~~k~~~p~~~vvv 83 (448)
T PRK14333 8 SYWITTFGCQMNKADSERMAGILEDMGYQWAED--E--LQADLVLYNTCTIRDNAEQKVYSYLGRQAKRKHKNPDLTLVV 83 (448)
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHCcCEECCC--c--ccCCEEEEEeeeeeehHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 477888888876556678889999999866531 1 011100 001111 11122333333222 22234445677
Q ss_pred EEechHHHHHHHHhhcCCccEEE
Q 021050 161 GHSKGGSVVLLYASKYNDIRTFV 183 (318)
Q Consensus 161 G~S~Gg~~a~~~a~~~p~v~~~v 183 (318)
|-++.-...-.+....|.|+.++
T Consensus 84 ~Gc~a~~~~~~~~~~~p~vD~v~ 106 (448)
T PRK14333 84 AGCVAQQEGESLLRRVPELDLVM 106 (448)
T ss_pred ECccCccCHHHHHhcCCCCCEEE
Confidence 66676666666655678787766
No 472
>PRK10867 signal recognition particle protein; Provisional
Probab=25.56 E-value=1.2e+02 Score=26.83 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=30.5
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~ 121 (318)
..|.+|++-|..|..-+.....++.+|.++ |+.|..++.-
T Consensus 98 ~~p~vI~~vG~~GsGKTTtaakLA~~l~~~~G~kV~lV~~D 138 (433)
T PRK10867 98 KPPTVIMMVGLQGAGKTTTAGKLAKYLKKKKKKKVLLVAAD 138 (433)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 457888888988887555667888888888 8888777653
No 473
>PRK14329 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=25.46 E-value=4.9e+02 Score=23.30 Aligned_cols=95 Identities=8% Similarity=-0.016 Sum_probs=50.9
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-ccCCCh-hhhHHHHHHHH---HHHHhCCCCcEEEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVV---QYFCGANRAVGAILG 161 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~-~~~~~~-~~~~~d~~~~i---~~l~~~~~~~i~l~G 161 (318)
++++-+|+..+...-..++..|.+.||.+.. +.. .++-- ....++ ......+...+ ..++...+...+++|
T Consensus 26 ~~i~t~GC~~N~~dse~~~~~l~~~G~~~~~-~~~---~ADiviiNTC~v~~~a~~k~~~~i~~~~~~k~~~p~~~ivvg 101 (467)
T PRK14329 26 LFIESYGCQMNFADSEIVASILQMAGYNTTE-NLE---EADLVLVNTCSIRDNAEQKVRKRLEKFNALKKKNPKLIVGVL 101 (467)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECC-Ccc---cCCEEEEeCcceechHHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 7888888887655667889999999987643 111 01100 001111 11123444444 333333444456666
Q ss_pred EechHHHHHHHHhhcCCccEEEEe
Q 021050 162 HSKGGSVVLLYASKYNDIRTFVNV 185 (318)
Q Consensus 162 ~S~Gg~~a~~~a~~~p~v~~~v~~ 185 (318)
-++-....-.++...|+++.++.-
T Consensus 102 Gc~a~~~~~~~l~~~~~vD~vv~~ 125 (467)
T PRK14329 102 GCMAERLKDKLLEEEKIVDLVVGP 125 (467)
T ss_pred CChhcCcHHHHHhcCCCceEEECC
Confidence 666555555555545557666643
No 474
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=25.35 E-value=83 Score=24.61 Aligned_cols=16 Identities=13% Similarity=0.339 Sum_probs=13.4
Q ss_pred HHHHHcCceEEEEcCC
Q 021050 106 VALQNEGISAFRFDFA 121 (318)
Q Consensus 106 ~~l~~~G~~v~~~d~~ 121 (318)
.+|+++|+.|+++|.-
T Consensus 53 ~~LA~~G~~V~avD~s 68 (218)
T PRK13255 53 LWLAEQGHEVLGVELS 68 (218)
T ss_pred HHHHhCCCeEEEEccC
Confidence 5567899999999975
No 475
>PRK05541 adenylylsulfate kinase; Provisional
Probab=25.34 E-value=1.1e+02 Score=22.65 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=27.4
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 119 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 119 (318)
..|.+|++-|..+++-+.....+++.|...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 45678899999888755566677777776666666664
No 476
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=25.04 E-value=1.2e+02 Score=24.51 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=24.8
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 91 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 91 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
|=||..-+.....++..|+++|++|+++|+--.|
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~ 40 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKH 40 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCccc
Confidence 5444443345677889999999999999986544
No 477
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=25.02 E-value=93 Score=27.93 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=34.7
Q ss_pred CCCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 81 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 81 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
.+.|+||++-|+.+.+-......+.+.|..+||+|+++--|
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P 336 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP 336 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc
Confidence 46799999999987765457888899998899999999877
No 478
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=25.02 E-value=2.1e+02 Score=26.31 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHHHhCCCCcEEEEEE------echHHHHHHHHhhcCCccEEEEecc
Q 021050 137 READDLRAVVQYFCGANRAVGAILGH------SKGGSVVLLYASKYNDIRTFVNVSG 187 (318)
Q Consensus 137 ~~~~d~~~~i~~l~~~~~~~i~l~G~------S~Gg~~a~~~a~~~p~v~~~v~~~~ 187 (318)
..+..+..++..+... .++++++|| |.|+++++...+..-.-.+.+.+.|
T Consensus 321 vRaRvis~al~d~i~e-~d~VfImGHk~pDmDalGsAig~~~~A~~~~~~a~~v~dp 376 (655)
T COG3887 321 VRARVISTALSDIIKE-SDNVFIMGHKFPDMDALGSAIGMQKFASMNNKEAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHHhh-cCcEEEEccCCCChHHHHHHHHHHHHHHhcccccEEEECc
Confidence 3366666666655543 678999999 7899999886665544355555655
No 479
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=24.99 E-value=1.5e+02 Score=22.83 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=26.4
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 91 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 91 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
|=||..-+.....++..|++.|++|+.+|.--.|.+
T Consensus 7 gKGGvGKTt~~~nLA~~la~~G~rvLliD~D~q~~~ 42 (212)
T cd02117 7 GKGGIGKSTTSQNLSAALAEMGKKVLQVGCDPKADS 42 (212)
T ss_pred CCCcCcHHHHHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence 544444334567899999999999999998755533
No 480
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=24.98 E-value=2.1e+02 Score=25.01 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=59.8
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhC----CCCcE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA----NRAVG 157 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~i 157 (318)
...+|+++---.+..+ .-...++.+.+.|.-|+-+|..++=.--+..... -...+.|++++.+.+..- ....-
T Consensus 47 ~~~~villSd~~G~~d--~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~e-cvylisd~Ealsr~~Qr~a~~g~yr~P 123 (456)
T COG3946 47 PQGLVILLSDEAGIGD--QERSRADALLARGALVAPVDLGAYLAALGADDNE-CVYLISDFEALSREAQRAADLGVYRLP 123 (456)
T ss_pred cceeeEEEEcccChhh--hhcchhHHHhhcCCeeeccccchhhhccccCCCc-ceEEehhHHHHhHHHHHHhhccCcccc
Confidence 3445555544333332 1344567777888999999988763322221111 111244555544444322 33445
Q ss_pred EEEEEechHHHHHHHHhhcCC--ccEEEEecc
Q 021050 158 AILGHSKGGSVVLLYASKYND--IRTFVNVSG 187 (318)
Q Consensus 158 ~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~ 187 (318)
+|.|---||.+++..+++.|. +.+.+.+.+
T Consensus 124 Vl~g~g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 124 VLTGPGQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred eEeecCCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 888999999999999988876 666665544
No 481
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.93 E-value=1.5e+02 Score=24.52 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=28.3
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 124 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G 124 (318)
-+|++-|.|+.- -+.++..|+++|..++.+|.-..|
T Consensus 39 ~~vLITGgg~Gl----Gr~ialefa~rg~~~vl~Din~~~ 74 (300)
T KOG1201|consen 39 EIVLITGGGSGL----GRLIALEFAKRGAKLVLWDINKQG 74 (300)
T ss_pred CEEEEeCCCchH----HHHHHHHHHHhCCeEEEEeccccc
Confidence 467777777654 678999999999999999987544
No 482
>PRK12828 short chain dehydrogenase; Provisional
Probab=24.82 E-value=1.3e+02 Score=23.36 Aligned_cols=31 Identities=19% Similarity=-0.057 Sum_probs=23.6
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
.+++.|..+.- -..+++.|.++|++|+.++.
T Consensus 9 ~vlItGatg~i----G~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGL----GRATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcH----hHHHHHHHHHCCCeEEEEeC
Confidence 46667765533 57788999999999999985
No 483
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=24.60 E-value=1.5e+02 Score=23.46 Aligned_cols=41 Identities=10% Similarity=0.146 Sum_probs=30.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
+|.+-|..++.-+.....+++.|.++|++|.++....|+..
T Consensus 3 vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~~d 43 (229)
T PRK14494 3 AIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHEFD 43 (229)
T ss_pred EEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccCCC
Confidence 56666765544335667899999999999999988766433
No 484
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=24.46 E-value=4.1e+02 Score=21.95 Aligned_cols=59 Identities=17% Similarity=0.177 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCce--EEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEechHHHH
Q 021050 101 MVNLAVALQNEGIS--AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVV 169 (318)
Q Consensus 101 ~~~~~~~l~~~G~~--v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a 169 (318)
+....+.+.+.|+. =+.+|. |.|.+... . ..-.+..-++.++. ....+++|+|-=.++.
T Consensus 165 l~~~i~~a~~~GI~~~~IilDP-GiGF~k~~------~-~n~~ll~~l~~l~~--lg~Pilvg~SRKsfig 225 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLDP-GFGFGKNL------S-HNYQLLARLAEFHH--FNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEeC-CCCcCCCH------H-HHHHHHHHHHHHHh--CCCCEEEEecccHHHH
Confidence 34445556667875 677884 66654321 1 12233444444543 2346899999555544
No 485
>PRK08177 short chain dehydrogenase; Provisional
Probab=24.42 E-value=1.4e+02 Score=23.09 Aligned_cols=32 Identities=16% Similarity=-0.024 Sum_probs=23.5
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 122 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 122 (318)
+++.|..+. .-..+++.|.++|++|++++...
T Consensus 4 vlItG~sg~----iG~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 4 ALIIGASRG----LGLGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred EEEeCCCch----HHHHHHHHHHhCCCEEEEEeCCC
Confidence 555555443 35678899999999999998653
No 486
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=24.36 E-value=1.8e+02 Score=23.09 Aligned_cols=28 Identities=25% Similarity=0.493 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 021050 100 SMVNLAVALQNEGISAFRFDFAGNGESE 127 (318)
Q Consensus 100 ~~~~~~~~l~~~G~~v~~~d~~g~G~s~ 127 (318)
.+..+++.|.+.|.+|..+|..|.|..+
T Consensus 58 Ef~amve~L~~~GvdV~ifddtg~~~TP 85 (318)
T COG4874 58 EFNAMVEGLRQAGVDVVIFDDTGQGETP 85 (318)
T ss_pred HHHHHHHHHHhcCceEEEeecCCCCCCC
Confidence 4667888999999999999999988775
No 487
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=24.36 E-value=3e+02 Score=20.47 Aligned_cols=80 Identities=9% Similarity=0.050 Sum_probs=39.7
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC-CCCCc-cCCChhhhHHHHHHHHHHHHhCCCCcEEEEEEec
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE-SEGSF-QYGNYWREADDLRAVVQYFCGANRAVGAILGHSK 164 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~-s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~ 164 (318)
|++-|.|.+. .....+...|..-|..+..++-..... .+... -..+......++..+++.++..+. +++.+-.+-
T Consensus 36 I~i~G~G~S~--~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~D~vI~iS~sG~t~~~i~~~~~ak~~g~-~iI~IT~~~ 112 (179)
T cd05005 36 IFVYGAGRSG--LVAKAFAMRLMHLGLNVYVVGETTTPAIGPGDLLIAISGSGETSSVVNAAEKAKKAGA-KVVLITSNP 112 (179)
T ss_pred EEEEecChhH--HHHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence 5666777665 556677777777788888764321100 00000 001222234556666666655432 344444444
Q ss_pred hHHHH
Q 021050 165 GGSVV 169 (318)
Q Consensus 165 Gg~~a 169 (318)
++.++
T Consensus 113 ~s~la 117 (179)
T cd05005 113 DSPLA 117 (179)
T ss_pred CCchH
Confidence 44333
No 488
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=24.08 E-value=3.4e+02 Score=20.93 Aligned_cols=39 Identities=10% Similarity=0.125 Sum_probs=25.3
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 121 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 121 (318)
..+.|+++.-...... .....+.+.+.+.|..+..+...
T Consensus 28 ~~~~i~~iptA~~~~~-~~~~~~~~~~~~lG~~~~~~~~~ 66 (210)
T cd03129 28 AGARVLFIPTASGDRD-EYGEEYRAAFERLGVEVVHLLLI 66 (210)
T ss_pred CCCeEEEEeCCCCChH-HHHHHHHHHHHHcCCceEEEecc
Confidence 4566777766655433 35667778888888877766543
No 489
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=24.02 E-value=1.6e+02 Score=24.67 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=28.7
Q ss_pred EEEEEccC--CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCC
Q 021050 85 IVVLCHGF--RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEG 128 (318)
Q Consensus 85 ~vv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~ 128 (318)
+||.+-.. ||+.-+.....+++.|.++|+++..+. ||||....
T Consensus 29 PVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~ 73 (311)
T TIGR00682 29 PVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVLS-RGYGSKTK 73 (311)
T ss_pred CEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEEC-CCCCCCCC
Confidence 34444432 333333677888999999999987776 69987653
No 490
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=23.99 E-value=1e+02 Score=28.09 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=20.7
Q ss_pred CCCCcEEEEEEechHHHHHHHHhhc
Q 021050 152 ANRAVGAILGHSKGGSVVLLYASKY 176 (318)
Q Consensus 152 ~~~~~i~l~G~S~Gg~~a~~~a~~~ 176 (318)
.+..+-.++|||+|=+.|+..|.-.
T Consensus 262 ~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 262 FAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred cCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3777889999999999988877654
No 491
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=23.83 E-value=2.2e+02 Score=23.74 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=31.7
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 125 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~ 125 (318)
...+|.++.+=||..-+.....++..|+++|++|+.+|.--.+.
T Consensus 92 ~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~ 135 (322)
T TIGR03815 92 RGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGG 135 (322)
T ss_pred CceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCC
Confidence 34566666666666544566788899999999999999864443
No 492
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=23.81 E-value=1.8e+02 Score=25.29 Aligned_cols=41 Identities=15% Similarity=0.154 Sum_probs=27.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC-CCCCC
Q 021050 85 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF-AGNGE 125 (318)
Q Consensus 85 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~-~g~G~ 125 (318)
+|.+...=||.+-+.....++..|+.+|++|+++|. -..|.
T Consensus 108 vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ~n 149 (388)
T PRK13705 108 VIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGT 149 (388)
T ss_pred EEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCCCc
Confidence 343444434444324567788899999999999995 55554
No 493
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.
Probab=23.78 E-value=95 Score=24.17 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=24.7
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 120 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 120 (318)
+++-|-++..-+.....++..+++.|++|+.+|.
T Consensus 2 ~~~~g~~g~Gkt~~~~~la~~~a~~g~~~~l~~~ 35 (217)
T cd02035 2 IFFTGKGGVGKTTIAAATAVRLAEEGKKVLLVST 35 (217)
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 4555555554335667888999999999998876
No 494
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=23.68 E-value=3e+02 Score=20.61 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=34.6
Q ss_pred HHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHhCC-CCcEEEEEEech
Q 021050 107 ALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGAN-RAVGAILGHSKG 165 (318)
Q Consensus 107 ~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~i~l~G~S~G 165 (318)
.|.+.|++.+.+|.-+.=..... .....++.+.++.++... .+++.|+--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~~------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPYE------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCCc------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 47888999999998754222211 122345666666666553 348999999886
No 495
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=23.64 E-value=1.3e+02 Score=26.32 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCCCccCcchhHHHHhhC--CCCE--EEEECCCCccC----CCChHHHHHHHHHHHHhh
Q 021050 249 ECSVLTIHGSSDKIIPLQDAHEFDKII--PNHK--LHVVEGANHGY----TNHQAELVSVVLDFVKAS 308 (318)
Q Consensus 249 ~~P~lii~g~~D~~~~~~~~~~~~~~~--~~~~--~~~~~~~gH~~----~~~~~~~~~~i~~fl~~~ 308 (318)
+.|++++.|.-|.+-. +....+.+.+ .+.. .+.+||.|+.. ..+.+.+.+.|++||...
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcC
Confidence 6799999999997742 3333343433 2443 44567888763 244567889999999763
No 496
>PRK14495 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion protein; Provisional
Probab=23.54 E-value=2.4e+02 Score=25.03 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=30.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 021050 86 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 126 (318)
Q Consensus 86 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s 126 (318)
||-+-|..++.-+.....++..|.++||+|-++-.-+|+..
T Consensus 3 Vi~IvG~sgSGKTTLiekLI~~L~~rG~rVavIKH~hH~fd 43 (452)
T PRK14495 3 VYGIIGWKDAGKTGLVERLVAAIAARGFSVSTVKHSHHDVD 43 (452)
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeccCcccC
Confidence 56666765554445778999999999999999887777643
No 497
>COG4213 XylF ABC-type xylose transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=23.49 E-value=4.5e+02 Score=22.11 Aligned_cols=78 Identities=17% Similarity=0.105 Sum_probs=44.2
Q ss_pred CCeEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC-CCCCccCCChhhhHHHHHHHHHHHHhCC---CCcE
Q 021050 82 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE-SEGSFQYGNYWREADDLRAVVQYFCGAN---RAVG 157 (318)
Q Consensus 82 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~-s~~~~~~~~~~~~~~d~~~~i~~l~~~~---~~~i 157 (318)
.++-+|++...-+.. .....+.-.+.|..|+++|..=+-. .+.-....++.--.-...+++..+..++ ...+
T Consensus 80 qg~~vlvi~a~d~~~----l~~~i~~A~~~gikViaYDRlI~n~dvd~YvsFDN~~VG~lQa~~l~~~lk~k~~~~~gn~ 155 (341)
T COG4213 80 QGVKVLVIGAIDGGV----LSNAVEKAKSEGIKVIAYDRLINNADVDFYVSFDNEKVGELQAKALVKGLKLKPLTSEGNY 155 (341)
T ss_pred cCCCEEEEEeccchh----HHHHHHHHHHcCCeEEEeecccccCCccEEEEecchhHHHHHHHHHHHHhccCCCCCCCCE
Confidence 455566665555443 5667777778899999999875431 1110111111111234455666666554 5567
Q ss_pred EEEEEe
Q 021050 158 AILGHS 163 (318)
Q Consensus 158 ~l~G~S 163 (318)
.++|-|
T Consensus 156 ~l~~GS 161 (341)
T COG4213 156 VLLGGS 161 (341)
T ss_pred EEecCC
Confidence 888777
No 498
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=23.19 E-value=2.5e+02 Score=19.09 Aligned_cols=55 Identities=20% Similarity=0.091 Sum_probs=30.4
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCCChhhhHHHHHHHHHHHHh
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG 151 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 151 (318)
|++||-.|.+-+...+.+++.+ |+.++.+|..-.... ........+..+++.+..
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~~~-------~~~~~~~~i~~~~~~~~~ 55 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELISS-------YAGDSEQKIRDFFKKAKK 55 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHHTS-------STTHHHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccccc-------cccccccccccccccccc
Confidence 6899998887332333333333 688888887643311 122234455555555533
No 499
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=23.14 E-value=50 Score=29.31 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCCcEEEEEEechHHHHHHHHhhcCC-ccEEE
Q 021050 144 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFV 183 (318)
Q Consensus 144 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 183 (318)
.+++.|..++.-+-++.|.|+||.+|..++.+..+ ++.+.
T Consensus 191 GVlrtL~e~dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 191 GVLRTLLEQDLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred HHHHHHHHccccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 45555655666677999999999999998887644 44443
No 500
>PRK15482 transcriptional regulator MurR; Provisional
Probab=22.99 E-value=1.2e+02 Score=24.77 Aligned_cols=80 Identities=8% Similarity=-0.045 Sum_probs=0.0
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCccCC-------ChhhhHHHHHHHHHHHHhCCCCcEEE
Q 021050 87 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYG-------NYWREADDLRAVVQYFCGANRAVGAI 159 (318)
Q Consensus 87 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~-------~~~~~~~d~~~~i~~l~~~~~~~i~l 159 (318)
|++.|.|.+. .....+...|..-|+.|....-...+......... ++.....++..+++.+++++ .+++.
T Consensus 138 I~i~G~G~S~--~~A~~l~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~Dv~i~iS~sg~t~~~~~~~~~a~~~g-~~iI~ 214 (285)
T PRK15482 138 IQITGLGGSA--LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQG-ATVIA 214 (285)
T ss_pred eEEEEeChhH--HHHHHHHHHHHhCCCeeEEeccHhHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCC-CEEEE
Q ss_pred EEEechHHHH
Q 021050 160 LGHSKGGSVV 169 (318)
Q Consensus 160 ~G~S~Gg~~a 169 (318)
+..+.+..++
T Consensus 215 IT~~~~s~la 224 (285)
T PRK15482 215 ITSLADSPLR 224 (285)
T ss_pred EeCCCCCchH
Done!