Query 021054
Match_columns 318
No_of_seqs 151 out of 394
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 12:05:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021054.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021054hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ll2a_ c.68.1.14 (A:) Glycoge 98.3 3.3E-06 2.4E-10 74.4 13.2 163 98-289 9-177 (263)
2 d1ga8a_ c.68.1.4 (A:) Galactos 98.3 1.2E-06 8.7E-11 78.2 8.9 180 96-286 3-199 (282)
3 d1o7qa_ c.68.1.9 (A:) alpha-1, 80.4 2.2 0.00016 37.3 7.7 187 84-286 35-246 (287)
4 d1lzia_ c.68.1.9 (A:) Glycosyl 61.2 3.2 0.00024 36.2 4.0 188 83-285 40-250 (283)
5 d1b4ba_ d.74.2.1 (A:) C-termin 41.6 16 0.0012 24.7 4.3 58 82-139 2-65 (71)
6 d1jyea_ c.93.1.1 (A:) Lac-repr 38.3 50 0.0036 26.4 8.0 46 81-127 17-64 (271)
7 d1omza_ c.68.1.15 (A:) Alpha-1 32.0 48 0.0035 24.7 6.5 32 94-127 6-37 (265)
8 d2p5ma1 d.74.2.1 (A:79-149) C- 31.6 23 0.0017 23.8 3.8 58 82-139 2-65 (71)
9 d1fcda2 c.3.1.5 (A:115-255) Fl 24.8 67 0.0049 23.8 6.0 49 79-127 20-74 (141)
10 d1vd6a1 c.1.18.3 (A:8-224) Put 21.8 81 0.0059 23.8 6.1 125 78-214 71-208 (217)
11 d2q4oa1 c.129.1.1 (A:8-190) Hy 20.3 64 0.0047 25.1 5.2 56 77-133 111-176 (183)
No 1
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=98.31 E-value=3.3e-06 Score=74.40 Aligned_cols=163 Identities=12% Similarity=0.020 Sum_probs=100.7
Q ss_pred EEeCcchHHHHHHHHHHhhhcCCCccEEEEEeC---HHHHHHHhccCCCceEEcCCCCCC--ccccccCchhHHHHHhhh
Q 021054 98 CAVSQPYLPFLNNWLISISRQKHQDQVLVIAED---YATLYKVNGRWPGHAVLVPPAPDS--QTAHKFGSQGFFNFTSRR 172 (318)
Q Consensus 98 t~~N~~y~~~l~Nwl~sl~~~gi~~~vlVvAlD---~~a~~~c~~~~pg~~v~~~~~~d~--~~~~~~gs~~f~~m~~~K 172 (318)
..+|.+|+.-+...+.|+++.+-...++|+..+ ++..+.+++. ++.+...+..+. ..........+...++.|
T Consensus 9 ~~t~d~Yl~~a~vl~~SL~~~~~~~~~vvl~~~~i~~~~~~~L~~~--~~~~~~v~~i~~~~~~~~~~~~~~~~~~ty~K 86 (263)
T d1ll2a_ 9 LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIV--FDEVITVDILDSGDSAHLTLMKRPELGVTLTK 86 (263)
T ss_dssp EESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHH--CSEEEECCTTSTTSTTHHHHHHCGGGHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHh--CCcceeEEeecCcchhhhhhhccccchhhhHH
Confidence 346999999999999999998764455555443 5666666665 333332221111 111111112333455566
Q ss_pred HHHHHHHHHcCC-eEEEeecceeeecCCcCCcCCCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEEEEecChHH
Q 021054 173 PCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMIYLRPTDGA 251 (318)
Q Consensus 173 ~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~y~R~T~~t 251 (318)
..+-. + ..| .|++.|+|++-++|+-+.|..+.-..+.... ...+.|+|++.++++...
T Consensus 87 l~i~~-l--~~ydkvlYLDaD~lv~~~id~Lf~~~~~~a~~~~~------------------~~~~~nsGv~l~~p~~~~ 145 (263)
T d1ll2a_ 87 LHCWS-L--TQYSKCVFMDADTLVLANIDDLFEREELSAAPDPG------------------WPDCFNSGVFVYQPSVET 145 (263)
T ss_dssp GGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSS------------------STTSEEEEEEEECCCHHH
T ss_pred HHHhh-h--cccceEEEeCCCEEEecCHHHHhcCCccceeccCC------------------CcccccCCcEEECccHHH
Confidence 65533 2 345 5999999999999998888654322221111 124789999999999987
Q ss_pred HHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhcCCC
Q 021054 252 KLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKTAGQ 289 (318)
Q Consensus 252 ~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~~~~ 289 (318)
..-+.+....... ....||..+|..+......
T Consensus 146 ~~~i~~~~~~~~~------~~~~dq~~ln~~~~~~~~~ 177 (263)
T d1ll2a_ 146 YNQLLHVASEQGS------FDGGDQGLLNTFFNSWATT 177 (263)
T ss_dssp HHHHHHHHHHTCC------TTSSHHHHHHHHTTTTTTS
T ss_pred HHHHHHHHHhhCC------CChhhhhHHHHHHHhhhcc
Confidence 7665554433222 3568999999999765544
No 2
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}
Probab=98.25 E-value=1.2e-06 Score=78.16 Aligned_cols=180 Identities=17% Similarity=0.143 Sum_probs=96.3
Q ss_pred EEEEeCcchHHHHHHHHHHhhhcCC--CccEEEEEe--CHHHHHHHhccC--CCceE--EcCCCCCCccccccCchhHHH
Q 021054 96 IVCAVSQPYLPFLNNWLISISRQKH--QDQVLVIAE--DYATLYKVNGRW--PGHAV--LVPPAPDSQTAHKFGSQGFFN 167 (318)
Q Consensus 96 IVt~~N~~y~~~l~Nwl~sl~~~gi--~~~vlVvAl--D~~a~~~c~~~~--pg~~v--~~~~~~d~~~~~~~gs~~f~~ 167 (318)
||.++|..|.+.+...+.|+.+..- .-++.|++. .++..+.+.+.. .++.+ ..-...+..... .....+..
T Consensus 3 Iv~~~D~nY~~~~~~~i~SL~~~~~~~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~s~ 81 (282)
T d1ga8a_ 3 IVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFP-LNIRHISI 81 (282)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHCTTSCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTTSC-CCCTTCCG
T ss_pred EEEECCHHHHHHHHHHHHHHHHHCcCCCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchHhcccc-ccccccCH
Confidence 6778999999999999999876432 123444443 355555554431 12222 221100000000 00112234
Q ss_pred HHhhhHHHHHHHHHcCC-eEEEeecceeeecCCcCCcC---CCCceeeecccccccCCCCCCCCCCCCCCCCcccceeEE
Q 021054 168 FTSRRPCHLLHILELGY-NVMYNDVDMVWLKDPFPYLQ---GDHDVYFTDDMAAVKPLDHSHDLPPPGKKGRTYICSCMI 243 (318)
Q Consensus 168 m~~~K~~~l~~lL~lGy-~VL~sDvDVVWLrdP~~~~~---~~aDv~~s~D~~~~~~~d~~~~~p~~g~~g~~~~NtGf~ 243 (318)
++..|.. +-++|. +| .+++.|+|++-++|+-+.+. ++.-+....|.......+...... ...+..++|+|+|
T Consensus 82 ~~y~Rl~-l~~~lp-~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~--~~~~~~yfNsGVm 157 (282)
T d1ga8a_ 82 TTYARLK-LGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIG--MADGEYYFNAGVL 157 (282)
T ss_dssp GGGGGGG-HHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTT--CCTTSCCEEEEEE
T ss_pred HHHHHHH-HhhhCC-ccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhhHHHhC--CCCCCceeeccee
Confidence 4556763 456665 56 49999999999999877664 344555555543211100000000 0123468999999
Q ss_pred EEec-----ChHHHHHHHHHHHHHHcCCcccCCCCCChHHHHHHHhhc
Q 021054 244 YLRP-----TDGAKLVMKKWIEELQAEPWSKAKKANDQPAFNWALNKT 286 (318)
Q Consensus 244 y~R~-----T~~t~~f~~~W~~~l~~~p~~~~~~~~DQ~afN~ll~~~ 286 (318)
.+-. ..-..++++. .+.... .....||.+||.++++.
T Consensus 158 l~n~~~~r~~~~~~~~~~~-~~~~~~-----~~~~~DQd~LN~~f~~~ 199 (282)
T d1ga8a_ 158 LINLKKWRRHDIFKMSSEW-VEQYKD-----VMQYQDQDILNGLFKGG 199 (282)
T ss_dssp EECHHHHTTSCHHHHHHHH-HHHHTT-----TCSSTHHHHHHHHHTTS
T ss_pred eechhhhhhhhHHHHHHHH-HHhccc-----CcccCchhHHHHHhcCC
Confidence 9932 2223333332 222211 13579999999998754
No 3
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=80.35 E-value=2.2 Score=37.35 Aligned_cols=187 Identities=12% Similarity=0.127 Sum_probs=98.9
Q ss_pred HHHHhhcc--CCeE-EEEEeCcchHH-HHHHHHHHhhh---cCCCccEEEEEeCHHHHHHHhccCCC--ceEEcCCCCCC
Q 021054 84 QAASFVAK--NGTI-IVCAVSQPYLP-FLNNWLISISR---QKHQDQVLVIAEDYATLYKVNGRWPG--HAVLVPPAPDS 154 (318)
Q Consensus 84 ell~~~A~--~~tV-IVt~~N~~y~~-~l~Nwl~sl~~---~gi~~~vlVvAlD~~a~~~c~~~~pg--~~v~~~~~~d~ 154 (318)
++|++.-+ +=|| +++++-..|.+ |++.|++|.++ .|...++.|.+-+....-.. ++.++ ..++...
T Consensus 35 ~~l~~~y~~~~~tIgl~vfAtgkY~~~Fl~~FleSaEk~Fm~g~~v~yyVFTD~~~~~P~i-~l~~~r~~~v~~v~---- 109 (287)
T d1o7qa_ 35 AVLDNYYAKQKITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRMPLI-ELGPLRSFKVFKIK---- 109 (287)
T ss_dssp HHHHHHHHHHTCCEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGCCCC-CCCTTEEEEEEECC----
T ss_pred HHHHHHHhhcCceEEEEEEEeChhHHHHHHHHHHHHHHhcCCCCeEEEEEEECCcccCCcc-ccCCccceEEEEcc----
Confidence 44555442 3344 66677778985 99999999988 57777888887765432111 11121 1122111
Q ss_pred ccccccCchhHHHHHhhhHHHHHHHHH----cCCe-EEEeecceeeecCCcC-CcCCCCceeee-cccccc-----cCCC
Q 021054 155 QTAHKFGSQGFFNFTSRRPCHLLHILE----LGYN-VMYNDVDMVWLKDPFP-YLQGDHDVYFT-DDMAAV-----KPLD 222 (318)
Q Consensus 155 ~~~~~~gs~~f~~m~~~K~~~l~~lL~----lGy~-VL~sDvDVVWLrdP~~-~~~~~aDv~~s-~D~~~~-----~~~d 222 (318)
....|..++..|.+.+.+..+ ..+| +.+.|+|+.+ +||+- ...+ |.+.+ .-.+.. .+++
T Consensus 110 ------~~~~Wp~iTL~Rm~~i~~~i~~~~~~e~Dylf~~DaDm~f-~~~vg~E~L~--~lv~~lHp~~y~~~~~~fpyE 180 (287)
T d1o7qa_ 110 ------PEKRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVF-QDKFGVETLG--ESVAQLQAWWYKADPNDFTYE 180 (287)
T ss_dssp ------CCSSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEE-CSCBCGGGCS--SEEEEECTTTTTSCGGGSCCC
T ss_pred ------ccCCCchhHHHHHHHHHHHHHHhhhccCCeEEEEeCCceE-eccccccccC--CccceecccccCCCCCCCCCc
Confidence 112466778888888876443 2556 6788999988 66642 1111 22221 111111 1111
Q ss_pred CC---CCCCCCCCCCCcccceeEEEEecChHHHHHHHHHHHHHHcCCcc-cCCCCCChHHHHHHHhhc
Q 021054 223 HS---HDLPPPGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWS-KAKKANDQPAFNWALNKT 286 (318)
Q Consensus 223 ~~---~~~p~~g~~g~~~~NtGf~y~R~T~~t~~f~~~W~~~l~~~p~~-~~~~~~DQ~afN~ll~~~ 286 (318)
.. .-.-+.| .|..+..+||+- =.++...++.+...+++...--. -.+.-+|---+|+-+-..
T Consensus 181 rrp~S~AyIp~~-egd~Yy~G~~~G-G~~~~vl~m~~~~~~~i~~D~~n~IiA~WHDESHLNkyf~~~ 246 (287)
T d1o7qa_ 181 RRKESAAYIPFG-EGDFYYHAAIFG-GTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLN 246 (287)
T ss_dssp CCTTSTTCCCTT-CCSCCEEEEEEE-ECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHS
T ss_pred CCCCccccccCC-CCceEEEeeecC-CCHHHHHHHHHHHHHhccCcccCCcceecccHHHHhhHHHhC
Confidence 11 1111112 234577777664 33455566666666655331000 023568899999987543
No 4
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.19 E-value=3.2 Score=36.17 Aligned_cols=188 Identities=14% Similarity=0.147 Sum_probs=86.7
Q ss_pred HHHHHhhcc-CC-eE-EEEEeCcchHHHHHHHHHHhhh---cCCCccEEEEEeCHHHHHHHhccCCC--ceEEcCCCCCC
Q 021054 83 SQAASFVAK-NG-TI-IVCAVSQPYLPFLNNWLISISR---QKHQDQVLVIAEDYATLYKVNGRWPG--HAVLVPPAPDS 154 (318)
Q Consensus 83 ~ell~~~A~-~~-tV-IVt~~N~~y~~~l~Nwl~sl~~---~gi~~~vlVvAlD~~a~~~c~~~~pg--~~v~~~~~~d~ 154 (318)
.++|++.-+ .| || +++++-..|..|++.|++|.++ .|...++.|.+-++...-.. .+.++ ..++.-.
T Consensus 40 ~~~l~~~~~~~~~tIgl~vfATGkY~~Fl~~f~eSaek~Fmpg~~v~yyvFTD~~~~vP~i-~l~~~~~v~v~~i~---- 114 (283)
T d1lzia_ 40 IDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVPRV-TLGTGRQLSVLEVR---- 114 (283)
T ss_dssp HHHHHHHHHTTTCEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGGSCCC-CCCTTEEEEEEECC----
T ss_pred HHHHHHHHhhCCceEEEEEEEeChHHHHHHHHHHHHHHhcCCCCeeEEEEEECCCccCCcc-ccccCCceEEEecc----
Confidence 355566553 23 44 4455666699999999999888 57666777777665432111 11122 1222211
Q ss_pred ccccccCchhHHHHHhhhHHHHHHH----HHcCCe-EEEeecceeeecCCcC-CcCCCCceeeec-cccc-----ccCCC
Q 021054 155 QTAHKFGSQGFFNFTSRRPCHLLHI----LELGYN-VMYNDVDMVWLKDPFP-YLQGDHDVYFTD-DMAA-----VKPLD 222 (318)
Q Consensus 155 ~~~~~~gs~~f~~m~~~K~~~l~~l----L~lGy~-VL~sDvDVVWLrdP~~-~~~~~aDv~~s~-D~~~-----~~~~d 222 (318)
+. ..|-.++..|.+.+.+. ....+| +++.|+|+.+ .|++. ... .|.+.+- -++. ..+++
T Consensus 115 -~~-----~~Wp~iTL~R~~~i~k~i~~~~~~e~DyLf~~DaDm~f-~~~vg~E~L--~~lvgv~HP~~y~~~~~~~~yE 185 (283)
T d1lzia_ 115 -AY-----KRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEF-RDHVGVEIL--TPLFGTLHPGFYGSSREAFTYE 185 (283)
T ss_dssp -------------------------CHHHHHHHCSEEEEECSSEEE-CSCBCGGGC--SSEEEEBCTTTTTCCGGGSCCC
T ss_pred -CC-----CCCchHHHHHHHHHHHHHHHHhhhcCCEEEEeecceEE-ecccccEEe--cCeeeEecccccCCCCCCCCcc
Confidence 01 12444556677776542 234667 6788999998 55542 111 1222221 1110 01111
Q ss_pred CCCCCCC--CCCCCCcccceeEEEEecChHHHHHHHHHHHHHHcCCccc-CCCCCChHHHHHHHhh
Q 021054 223 HSHDLPP--PGKKGRTYICSCMIYLRPTDGAKLVMKKWIEELQAEPWSK-AKKANDQPAFNWALNK 285 (318)
Q Consensus 223 ~~~~~p~--~g~~g~~~~NtGf~y~R~T~~t~~f~~~W~~~l~~~p~~~-~~~~~DQ~afN~ll~~ 285 (318)
......+ +...|..+..+||+- =.++...++.+...+++...--.. .+.-+|---+|+-+..
T Consensus 186 rrp~S~AyIp~~egd~Yy~G~~~G-G~~~~vl~m~~~~~~~i~~D~~n~IiA~WHDEShlNkyf~~ 250 (283)
T d1lzia_ 186 RRPQSQAYIPKDEGDFYYLGGFFG-GSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLR 250 (283)
T ss_dssp CCTTSTTCCCTTCCSCCBCTTEEE-EEHHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred cCcceeeeccCCCCCeEEEeeeeC-CCHHHHHHHHHHHHHHHHHHhcCCceeeecchhHhhhHHHH
Confidence 1110000 011233466666554 345667777777766664321001 2345788999997765
No 5
>d1b4ba_ d.74.2.1 (A:) C-terminal domain of arginine repressor {Bacillus stearothermophilus [TaxId: 1422]}
Probab=41.55 E-value=16 Score=24.73 Aligned_cols=58 Identities=16% Similarity=0.136 Sum_probs=42.7
Q ss_pred HHHHHHhhccCCeEEEEEeCcchHHHHHHHHHHhhhcCC------CccEEEEEeCHHHHHHHhc
Q 021054 82 LSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKH------QDQVLVIAEDYATLYKVNG 139 (318)
Q Consensus 82 L~ell~~~A~~~tVIVt~~N~~y~~~l~Nwl~sl~~~gi------~~~vlVvAlD~~a~~~c~~ 139 (318)
|+|.+-++...+..+|.-+-.+++..+-..+..++--++ .|.++|++.|++..+.+.+
T Consensus 2 L~d~~vsv~~~~~~vvikT~pG~A~~va~~iD~~~~~~I~GTIAGdDTIlii~~~~~~a~~l~~ 65 (71)
T d1b4ba_ 2 LVDVFIKLDGTGNLLVLRTLPGNAHAIGVLLDNLDWDEIVGTICGDDTCLIICRTPKDAKKVSN 65 (71)
T ss_dssp HHHHEEEEEEETTEEEEEESTTCHHHHHHHHHHHCCTTEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred hhHhEEEEeecCCEEEEEcCCChHHHHHHHHhcCCCCCeEEEEecCCEEEEEECCHHHHHHHHH
Confidence 556665666555666666678889988899888765332 6899999999988777654
No 6
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=38.29 E-value=50 Score=26.40 Aligned_cols=46 Identities=11% Similarity=0.116 Sum_probs=29.3
Q ss_pred hHHHHHHhhcc--CCeEEEEEeCcchHHHHHHHHHHhhhcCCCccEEEE
Q 021054 81 TLSQAASFVAK--NGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVI 127 (318)
Q Consensus 81 ~L~ell~~~A~--~~tVIVt~~N~~y~~~l~Nwl~sl~~~gi~~~vlVv 127 (318)
.+-+-+++.|+ +=.+++..++..-.+-..+-++.+.+.++ +-+++.
T Consensus 17 ~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~~v-dgiIl~ 64 (271)
T d1jyea_ 17 QIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRV-SGLIIN 64 (271)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTC-SCEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhcCC-CEEEec
Confidence 34444455553 44677777665555666777788877776 777764
No 7
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.99 E-value=48 Score=24.68 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=23.3
Q ss_pred eEEEEEeCcchHHHHHHHHHHhhhcCCCccEEEE
Q 021054 94 TIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVI 127 (318)
Q Consensus 94 tVIVt~~N~~y~~~l~Nwl~sl~~~gi~~~vlVv 127 (318)
|||+.+-|. .+.+..-++|+.++...+.++||
T Consensus 6 tvii~tyn~--~~~l~~~l~sl~~q~~~~~~iiV 37 (265)
T d1omza_ 6 TLIMQTYNR--TDLLLRLLNHYQAVPSLHKVIVV 37 (265)
T ss_dssp EEEEEESSC--HHHHHHHHHHHTTSTTEEEEEEE
T ss_pred EEEEEcCCC--HHHHHHHHHHHHcCCCcCeEEEE
Confidence 677766666 56788899999888775556555
No 8
>d2p5ma1 d.74.2.1 (A:79-149) C-terminal domain of arginine repressor {Bacillus subtilis [TaxId: 1423]}
Probab=31.59 E-value=23 Score=23.82 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=41.2
Q ss_pred HHHHHHhhccCCeEEEEEeCcchHHHHHHHHHHhhhcCC------CccEEEEEeCHHHHHHHhc
Q 021054 82 LSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKH------QDQVLVIAEDYATLYKVNG 139 (318)
Q Consensus 82 L~ell~~~A~~~tVIVt~~N~~y~~~l~Nwl~sl~~~gi------~~~vlVvAlD~~a~~~c~~ 139 (318)
|++.+-++......+|.-+-.++++.+-+.+..++--++ .|.++|++.|++..+.+.+
T Consensus 2 L~d~~vsi~~~~~~vvikT~pG~A~~va~~iD~~~~~~I~GTIAGdDTilii~~s~~~a~~l~~ 65 (71)
T d2p5ma1 2 LMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKN 65 (71)
T ss_dssp HHHHEEEEEEETTEEEEEESTTCHHHHHHHHHTTTCTTCCEEEECSSEEEEECSSHHHHHHHHH
T ss_pred chHhEEEEEecCCEEEEEcCCChHHHHHHHHhcCCCCCeEEEEccCCEEEEEECCHHHHHHHHH
Confidence 344444445555556666667889999999988765433 6899999999998887764
No 9
>d1fcda2 c.3.1.5 (A:115-255) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=24.83 E-value=67 Score=23.79 Aligned_cols=49 Identities=14% Similarity=0.285 Sum_probs=34.3
Q ss_pred cchHHHHHHhhccCCeEEEEEeCcch------HHHHHHHHHHhhhcCCCccEEEE
Q 021054 79 DYTLSQAASFVAKNGTIIVCAVSQPY------LPFLNNWLISISRQKHQDQVLVI 127 (318)
Q Consensus 79 ~~~L~ell~~~A~~~tVIVt~~N~~y------~~~l~Nwl~sl~~~gi~~~vlVv 127 (318)
...|++.|++.-.++.+|+|..+..| ..++..--..+++.|+.+++.|+
T Consensus 20 ~~~L~~~l~~~~~Gg~vv~t~p~~P~kCpgAP~e~a~l~~~~lr~~g~r~kv~i~ 74 (141)
T d1fcda2 20 TAILRKQLEDMADGGTVVIAPPAAPFRCPPGPYERASQVAYYLKAHKPMSKVIIL 74 (141)
T ss_dssp HHHHHHHHHHSCTTCCEEEECCCSSCSSTTHHHHHHHHHHHHHGGGCSCCCEEEE
T ss_pred HHHHHHHHHhcccCCeEEEecCCCCccCCchHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 34677777666567789999888866 23444445568899998887664
No 10
>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}
Probab=21.81 E-value=81 Score=23.82 Aligned_cols=125 Identities=12% Similarity=-0.004 Sum_probs=65.7
Q ss_pred CcchHHHHHHhhcc-CCeEE-EEEeCc-ch-HHHHHHHHHHhhhcCCCccEEEEEeCHHHHHHHhccCCCceEE--cCCC
Q 021054 78 RDYTLSQAASFVAK-NGTII-VCAVSQ-PY-LPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVL--VPPA 151 (318)
Q Consensus 78 ~~~~L~ell~~~A~-~~tVI-Vt~~N~-~y-~~~l~Nwl~sl~~~gi~~~vlVvAlD~~a~~~c~~~~pg~~v~--~~~~ 151 (318)
.-++|++++..... ++..+ +=.-+. .. ..+....+... +..+++++...|.+..+.+.+..|...+. ....
T Consensus 71 ~iptl~e~l~~~~~~~~~~~~ie~K~~~~~~~~~~~~l~~~~---~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~ 147 (217)
T d1vd6a1 71 DLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALL---RGREGVWVSSFDPLALLALRKAAPGLPLGFLMAED 147 (217)
T ss_dssp TCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHT---TTCSSEEEEESCHHHHHHHHHHCTTSCEEEEESSC
T ss_pred cCCCHHHHHHHHHhCCCceeeeeeccCcchhHHHHHHHHHHh---hccceEEEeeccHHHHHHHHHHhccCceeeecccc
Confidence 56689999987754 34333 333322 22 23444443333 33477889999999999998877765432 1111
Q ss_pred C-CCccc--cccCchhHHHHHhhhHHHHHHHHHcCCeEEEeecceeeecC-CcC--C-cCCCCceeeecc
Q 021054 152 P-DSQTA--HKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKD-PFP--Y-LQGDHDVYFTDD 214 (318)
Q Consensus 152 ~-d~~~~--~~~gs~~f~~m~~~K~~~l~~lL~lGy~VL~sDvDVVWLrd-P~~--~-~~~~aDv~~s~D 214 (318)
. ..... -.+-+..+ ......++.++-+.|..|. +|.-| |-. + +..+.|.+++++
T Consensus 148 ~~~~~~~~~~~~i~~~~---~~~~~~~v~~~~~~g~~v~------~wTvn~~~~~~~~~~~gvdgI~TD~ 208 (217)
T d1vd6a1 148 HSALLPCLGVEAVHPHH---ALVTEEAVAGWRKRGLFVV------AWTVNEEGEARRLLALGLDGLIGDR 208 (217)
T ss_dssp CGGGGGGSCCSEEEEBG---GGCCHHHHHHHHHTTCEEE------EECCCCHHHHHHHHHTTCSEEEESC
T ss_pred ccchhhhccceEEcchH---hHHHHHHHHHHHHCCCEEE------EECCCCHHHHHHHHhCCCCEEEECC
Confidence 0 00000 00001111 1124567888899999874 45433 311 1 123677766643
No 11
>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.31 E-value=64 Score=25.15 Aligned_cols=56 Identities=13% Similarity=0.094 Sum_probs=35.4
Q ss_pred CCcchHHHHHHhhc------cCCeEEEEEeCcchHHHHHHHHHHhhhcCCC----ccEEEEEeCHHH
Q 021054 77 WRDYTLSQAASFVA------KNGTIIVCAVSQPYLPFLNNWLISISRQKHQ----DQVLVIAEDYAT 133 (318)
Q Consensus 77 ~~~~~L~ell~~~A------~~~tVIVt~~N~~y~~~l~Nwl~sl~~~gi~----~~vlVvAlD~~a 133 (318)
..-=||+|+..-.. .++.+|+...|. |++-+..|+.++...|.. ...+.++.|.+.
T Consensus 111 GG~GTLdEl~e~lt~~ql~~~~kpiiiln~~g-fw~~l~~~l~~~~~~g~i~~~~~~~~~~~d~~~e 176 (183)
T d2q4oa1 111 GGYGTLEELLEVITWAQLGIHDKPVGLLNVDG-YYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKE 176 (183)
T ss_dssp CCHHHHHHHHHHHHHHHHTSCCCCEEEECGGG-TTHHHHHHHHHHHHTTSSCHHHHTTEEEESSHHH
T ss_pred CcchhHHHHHHHHHHHHhcCCCCCeEEeecCc-cHHHHHHHHHHHHHCCCCChHHcCcEEEcCCHHH
Confidence 35568888887653 367777777665 556666688887666651 233455666543
Done!