Query 021060
Match_columns 318
No_of_seqs 276 out of 1384
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 12:10:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021060.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021060hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2dkta2 g.93.1.1 (A:82-137) RI 100.0 1.4E-29 1E-33 183.7 5.1 56 145-202 1-56 (56)
2 d2dkta1 g.89.1.1 (A:8-81) RING 99.7 1.8E-18 1.3E-22 131.4 6.1 73 63-144 2-74 (74)
3 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.4 7.7E-14 5.6E-18 98.4 2.2 50 208-257 2-51 (52)
4 d1iyma_ g.44.1.1 (A:) EL5 RING 99.3 9.8E-13 7.1E-17 93.9 4.2 49 206-256 5-54 (55)
5 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.3 1.5E-12 1.1E-16 95.4 4.4 52 206-257 3-55 (65)
6 d1chca_ g.44.1.1 (A:) Immediat 99.2 1.9E-12 1.4E-16 95.4 3.8 51 204-258 3-53 (68)
7 d1v87a_ g.44.1.1 (A:) Deltex p 99.2 6.5E-12 4.8E-16 100.2 4.5 56 203-258 22-95 (114)
8 d1fbva4 g.44.1.1 (A:356-434) C 99.1 1.2E-11 9E-16 93.8 4.8 49 205-257 22-70 (79)
9 d3dplr1 g.44.1.1 (R:19-106) RI 99.1 2.2E-11 1.6E-15 93.8 5.4 52 205-257 20-85 (88)
10 d1rmda2 g.44.1.1 (A:1-86) V(D) 98.9 2.7E-10 1.9E-14 88.2 4.4 47 207-257 24-70 (86)
11 d1jm7a_ g.44.1.1 (A:) brca1 RI 98.9 4.4E-10 3.2E-14 88.3 3.2 46 207-256 22-69 (103)
12 d2c2la2 g.44.1.2 (A:225-304) S 98.8 1.6E-09 1.2E-13 81.4 5.9 50 204-257 5-54 (80)
13 d2baya1 g.44.1.2 (A:1-56) Pre- 98.7 1.8E-09 1.3E-13 76.5 2.9 46 208-257 2-47 (56)
14 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.7 3.8E-09 2.8E-13 78.8 4.9 50 204-257 6-55 (78)
15 d1bora_ g.44.1.1 (A:) Acute pr 98.7 1.1E-09 8.3E-14 78.1 0.6 42 207-256 7-48 (56)
16 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.7 4.9E-09 3.5E-13 81.3 3.5 45 206-256 22-66 (97)
17 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.6 5.5E-09 4E-13 74.6 2.7 51 202-256 2-58 (60)
18 d1wima_ g.44.1.1 (A:) UbcM4-in 98.2 4E-07 2.9E-11 69.4 4.5 48 204-252 3-57 (94)
19 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.1 1.6E-06 1.2E-10 67.4 4.7 50 202-256 18-68 (98)
20 d2jnea1 g.41.18.1 (A:1-71) Hyp 89.1 0.022 1.6E-06 41.6 -1.1 67 205-300 1-70 (71)
21 d2jnea1 g.41.18.1 (A:1-71) Hyp 89.0 0.084 6.1E-06 38.4 2.0 35 121-155 18-60 (71)
22 d2dkta2 g.93.1.1 (A:82-137) RI 81.6 0.26 1.9E-05 34.2 1.4 30 147-176 18-47 (56)
23 d1we9a_ g.50.1.2 (A:) PHD fing 80.7 0.16 1.1E-05 35.1 0.1 52 204-256 4-60 (64)
24 d1f62a_ g.50.1.2 (A:) Williams 80.4 0.4 2.9E-05 31.4 2.1 44 208-254 2-50 (51)
25 d1vd4a_ g.41.3.1 (A:) Transcri 78.0 0.42 3E-05 33.7 1.6 12 159-170 35-46 (62)
26 d1weoa_ g.44.1.1 (A:) Cellulos 75.7 1.7 0.00013 32.4 4.7 57 201-257 11-70 (93)
27 d1s3ga2 g.41.2.1 (A:126-160) M 64.5 0.69 5E-05 28.9 0.1 26 136-170 4-29 (35)
28 d1wewa_ g.50.1.2 (A:) Sumoylat 63.3 1.1 7.9E-05 31.9 1.1 48 206-256 16-74 (78)
29 d1zina2 g.41.2.1 (A:126-160) M 61.9 0.86 6.3E-05 28.5 0.2 26 136-170 4-29 (35)
30 d2fcwb1 g.12.1.1 (B:86-124) Li 58.8 2.9 0.00021 26.2 2.4 33 178-211 5-39 (39)
31 d2ak3a2 g.41.2.1 (A:125-161) M 57.5 0.99 7.2E-05 28.5 -0.1 26 136-170 4-29 (37)
32 d1mm2a_ g.50.1.2 (A:) Mi2-beta 56.5 1.4 0.0001 29.8 0.6 46 206-255 9-57 (61)
33 d1e4va2 g.41.2.1 (A:122-156) M 52.8 1.3 9.6E-05 27.5 -0.1 26 136-170 4-29 (35)
34 d1akya2 g.41.2.1 (A:131-168) M 51.8 1.8 0.00013 27.3 0.5 26 136-170 4-29 (38)
35 d1pfva3 g.41.1.1 (A:141-175) M 49.3 4 0.00029 25.4 1.8 23 123-145 4-26 (35)
36 d1k3xa3 g.39.1.8 (A:223-262) E 48.6 4.3 0.00031 25.6 2.0 20 134-153 12-39 (40)
37 d1rqga3 g.41.1.1 (A:139-173) M 45.9 5.2 0.00038 24.8 2.0 22 123-144 4-25 (35)
38 d1wepa_ g.50.1.2 (A:) PHD fing 44.5 8.6 0.00062 26.9 3.3 47 207-256 13-65 (79)
39 d1fp0a1 g.50.1.2 (A:19-88) Nuc 43.3 3.9 0.00029 28.2 1.2 30 227-256 24-56 (70)
40 d1tdza3 g.39.1.8 (A:225-271) D 43.1 5.6 0.00041 25.8 1.9 19 135-153 19-45 (47)
41 d1k82a3 g.39.1.8 (A:225-268) D 42.9 5.7 0.00042 25.4 1.9 18 135-152 17-42 (44)
42 d2k4xa1 g.41.8.8 (A:1-55) Ribo 42.9 6.9 0.0005 26.6 2.4 22 134-155 18-45 (55)
43 d1mm2a_ g.50.1.2 (A:) Mi2-beta 42.4 12 0.00086 24.8 3.7 48 165-214 8-55 (61)
44 d2fiya1 e.59.1.1 (A:19-308) Fd 40.9 7.8 0.00057 34.1 3.2 30 119-148 188-218 (290)
45 d1r2za3 g.39.1.8 (A:229-274) D 39.0 7.2 0.00052 25.1 1.9 18 135-152 19-44 (46)
46 d1wesa_ g.50.1.2 (A:) PHD Inhi 37.0 8.7 0.00064 26.7 2.3 44 207-255 17-66 (71)
47 d2ayja1 g.41.8.7 (A:1-56) Ribo 34.3 18 0.0013 24.4 3.5 29 115-143 13-42 (56)
48 d2bi6h1 g.3.12.1 (H:8-31) Brom 33.0 6.8 0.0005 22.3 0.9 15 135-149 9-23 (26)
49 d1ryqa_ g.41.9.3 (A:) putative 28.8 11 0.00083 26.3 1.7 23 119-142 7-29 (67)
50 d2cs3a1 g.44.1.3 (A:8-87) Prot 28.5 15 0.0011 26.3 2.3 37 203-243 5-45 (80)
51 d1ee8a3 g.39.1.8 (A:211-266) D 27.6 14 0.001 24.6 1.9 9 145-153 44-52 (56)
52 d2co8a2 g.39.1.3 (A:8-43) Nedd 27.4 8.4 0.00061 24.0 0.7 32 203-237 5-36 (36)
53 d1wila_ g.50.1.3 (A:) Hypothet 27.4 17 0.0013 26.6 2.6 32 204-240 13-47 (89)
54 d1b8ta3 g.39.1.3 (A:101-143) C 26.2 7.8 0.00057 24.8 0.4 29 206-237 15-43 (43)
55 d2j0151 g.41.8.5 (5:2-60) Ribo 25.1 12 0.00085 25.5 1.1 29 283-316 28-56 (59)
56 d1x6ea2 g.37.1.1 (A:41-66) Zin 25.0 11 0.00083 21.6 0.9 10 162-171 1-10 (26)
57 d2adra1 g.37.1.1 (A:102-130) A 24.9 18 0.0013 20.9 1.8 16 245-260 2-17 (29)
58 d1neea2 g.59.1.1 (A:99-135) Zi 24.8 5.6 0.00041 24.9 -0.6 14 303-316 2-15 (37)
59 d1weva_ g.50.1.2 (A:) PHD fing 24.5 21 0.0015 24.9 2.6 22 148-169 18-39 (88)
60 d2zjrz1 g.41.8.5 (Z:2-59) Ribo 24.3 19 0.0014 24.3 2.2 29 283-316 28-56 (58)
61 d1k81a_ g.59.1.1 (A:) Zinc-bin 23.7 10 0.00075 23.5 0.6 14 304-317 2-15 (36)
62 d1dvpa2 g.50.1.1 (A:149-220) H 23.4 18 0.0013 25.0 1.9 24 135-171 14-37 (72)
63 d1vfya_ g.50.1.1 (A:) vps27p p 23.1 16 0.0012 24.8 1.6 23 135-170 6-28 (67)
64 d1tbna_ g.49.1.1 (A:) Protein 22.9 21 0.0015 23.9 2.2 11 160-170 33-43 (66)
65 d1qxfa_ g.41.8.4 (A:) Ribosoma 21.6 22 0.0016 24.2 2.0 34 121-154 7-46 (58)
66 d1tota1 g.44.1.6 (A:1-52) CREB 20.8 24 0.0018 23.2 2.1 10 161-170 4-13 (52)
67 d1lkoa2 g.41.5.1 (A:148-191) R 20.6 18 0.0013 23.2 1.4 28 118-145 5-35 (44)
68 d2pnxa1 g.50.1.2 (A:195-245) I 20.6 12 0.00086 24.2 0.4 25 229-253 25-50 (51)
69 d1x4sa1 g.85.1.2 (A:8-53) Zinc 20.4 19 0.0014 23.3 1.5 20 135-154 8-27 (46)
No 1
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=1.4e-29 Score=183.67 Aligned_cols=56 Identities=57% Similarity=1.394 Sum_probs=54.1
Q ss_pred ceEecCccccccCCCCCCeeecCCCCceeecCCcceeeccCccceeeccccccccccC
Q 021060 145 GEYFCESCKLFDDDTSKKQYHCDGCGICRIGGCDNFFHCNKCRCCYSMLLKNSHPCVE 202 (318)
Q Consensus 145 ~~YfC~~Ckl~ddd~~k~~yHC~~CgiCR~G~~~~ffHC~~C~~C~s~~l~~~H~Cie 202 (318)
|+|||+|||||||| |+||||++|||||+|++++||||++||+||+++|+++|+|+|
T Consensus 1 G~YfC~iC~l~ddd--k~~yHC~~CgiCRvG~~~~ffHC~~C~~C~~~~l~~~H~CiE 56 (56)
T d2dkta2 1 GEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIE 56 (56)
T ss_dssp CSEECSSSCCEECS--SSEEEETTTTEEEESCGGGEEEETTTTEEEEGGGSSSSCCSC
T ss_pred CceECCcCCcccCC--CCcccCCCCCceeecCCccccccCccccccCcccCCCccccC
Confidence 68999999999885 999999999999999999999999999999999999999997
No 2
>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=1.8e-18 Score=131.44 Aligned_cols=73 Identities=34% Similarity=0.854 Sum_probs=68.7
Q ss_pred hhccCCCccCCccccccceeEcCCCCCeecCcchHhhhhcCCCcCccCCCCCCCccCceeecCCCCccccccccCcCCCC
Q 021060 63 LLRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGV 142 (318)
Q Consensus 63 ~~~~~~~~~gC~HY~R~c~i~~pCC~~~y~Cr~CHde~~~~~~~~~~~~H~ldR~~v~~v~C~~C~~eQ~v~~~C~~Cg~ 142 (318)
++|...+.+||+||+|+|+|+|++||++|+|+.||+++. .|.++|++++.++|..|+++|++.+.|++||.
T Consensus 2 ~~~~~~~~~gC~HY~r~~~l~C~~Cg~~~~C~~C~~~lt---------~H~~~~k~~~~l~CH~Cg~~~~~~~~C~~Cgs 72 (74)
T d2dkta1 2 VRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLCHDTNE---------DHQLDRFKVKEVQCINCEKLQHAQQTCEDCST 72 (74)
T ss_dssp CCCCCCCSSSCSSCCCSEEEEETTTTEEESSHHHHHHTS---------SSCCCSSSCCCEEESSSCCEECSCSBCSSSCC
T ss_pred ccCCCCCCCCCcccCcceEEEcCcCcCeeeCCCCCCccc---------ccccccccCCEEEeccCCCcccCCCcCCCCCC
Confidence 357788889999999999999999999999999999976 69999999999999999999999999999999
Q ss_pred cc
Q 021060 143 CM 144 (318)
Q Consensus 143 ~f 144 (318)
.|
T Consensus 73 ~F 74 (74)
T d2dkta1 73 LF 74 (74)
T ss_dssp BS
T ss_pred CC
Confidence 87
No 3
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=7.7e-14 Score=98.42 Aligned_cols=50 Identities=28% Similarity=0.634 Sum_probs=41.2
Q ss_pred CCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 208 DCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 208 ~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
+||||++++......+.+++|||.||..|+.+|++..+.+||+||+++.+
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 69999998655444456679999999999999998766789999998853
No 4
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.28 E-value=9.8e-13 Score=93.88 Aligned_cols=49 Identities=29% Similarity=0.719 Sum_probs=40.4
Q ss_pred CCCCcccccccccCCceeEEc-CCCCccchHHHHHHHhcCCCCCCCCCcccC
Q 021060 206 HHDCPVCCEYLFETRQDVIVL-PCGHTIHKNCLKEMREHHQYACPICSKSVC 256 (318)
Q Consensus 206 ~~~CpIClE~lf~s~~~v~~L-pCGH~fH~~Cl~~wl~~~~~~CPiCrks~~ 256 (318)
...||||+++ +..++.+..+ +|||.||..|+.+|++. +.+||+||+++.
T Consensus 5 ~~~C~ICl~~-~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~-~~~CP~CR~~i~ 54 (55)
T d1iyma_ 5 GVECAVCLAE-LEDGEEARFLPRCGHGFHAECVDMWLGS-HSTCPLCRLTVV 54 (55)
T ss_dssp SCCCTTTCCC-CCTTSCCEECSSSCCEECTTHHHHTTTT-CCSCSSSCCCSC
T ss_pred CCCCeEECcc-ccCCCEEEEeCCCCCcccHHHHHHHHHh-CCcCCCCCCEeE
Confidence 3569999997 4445567666 59999999999999985 689999999874
No 5
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=1.5e-12 Score=95.35 Aligned_cols=52 Identities=23% Similarity=0.607 Sum_probs=42.4
Q ss_pred CCCCcccccccccCCc-eeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 206 HHDCPVCCEYLFETRQ-DVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 206 ~~~CpIClE~lf~s~~-~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
+..||||++.++.+.+ .+++++|||.||..|+.+|++..+.+||+||+.+..
T Consensus 3 d~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~ 55 (65)
T d1g25a_ 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccc
Confidence 5789999997655443 345679999999999999997666789999998853
No 6
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.23 E-value=1.9e-12 Score=95.42 Aligned_cols=51 Identities=25% Similarity=0.624 Sum_probs=42.1
Q ss_pred CCCCCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCch
Q 021060 204 AMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDM 258 (318)
Q Consensus 204 ~~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d~ 258 (318)
+....||||++.+. ++++.+||||.||..|+.+|++. +.+||+||..+.++
T Consensus 3 ~~~d~C~IC~~~~~---~~~~~~~C~H~Fc~~Ci~~w~~~-~~~CP~CR~~i~~~ 53 (68)
T d1chca_ 3 TVAERCPICLEDPS---NYSMALPCLHAFCYVCITRWIRQ-NPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCCSSCCSCCC---SCEEETTTTEEESTTHHHHHHHH-SCSTTTTCCCCCCE
T ss_pred CCCCCCccCCcCcc---CCcEEeCCCCcCcHHHHHHHHHh-CCcCCCCCcchHhh
Confidence 34578999999743 25678999999999999999985 57899999988643
No 7
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.17 E-value=6.5e-12 Score=100.19 Aligned_cols=56 Identities=27% Similarity=0.437 Sum_probs=43.4
Q ss_pred CCCCCCCcccccccccC--------------CceeEEcCCCCccchHHHHHHHhcC----CCCCCCCCcccCch
Q 021060 203 GAMHHDCPVCCEYLFET--------------RQDVIVLPCGHTIHKNCLKEMREHH----QYACPICSKSVCDM 258 (318)
Q Consensus 203 ~~~~~~CpIClE~lf~s--------------~~~v~~LpCGH~fH~~Cl~~wl~~~----~~~CPiCrks~~d~ 258 (318)
...+..|+||++.|... ...+.+++|||.||..||.+||+.. +.+||+||..+...
T Consensus 22 ~~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 22 VAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred ccccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccC
Confidence 34467899999987432 2345678999999999999999753 35899999988653
No 8
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=1.2e-11 Score=93.77 Aligned_cols=49 Identities=31% Similarity=0.731 Sum_probs=40.9
Q ss_pred CCCCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 205 MHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 205 ~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
....||||++. +. .++++||||.||..|+..|+..+..+||+||+.+..
T Consensus 22 ~~~~C~IC~~~-~~---~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~ 70 (79)
T d1fbva4 22 TFQLCKICAEN-DK---DVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 70 (79)
T ss_dssp CTTBCTTTSSS-BC---CEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCC
T ss_pred CCCCCccCCCc-CC---CeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccC
Confidence 34569999985 33 467899999999999999997556789999999874
No 9
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=2.2e-11 Score=93.78 Aligned_cols=52 Identities=17% Similarity=0.463 Sum_probs=39.7
Q ss_pred CCCCCccccccccc--------------CCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 205 MHHDCPVCCEYLFE--------------TRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 205 ~~~~CpIClE~lf~--------------s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
.+.+|+||++.+.. ....++.++|||.||..||.+||+. +.+||+||+.+..
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-~~~CP~CR~~~~~ 85 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREWEF 85 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT-CSBCSSSCSBCCE
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHH-CCcCCCCCCcccc
Confidence 35668888765432 1224678899999999999999985 6889999998863
No 10
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.93 E-value=2.7e-10 Score=88.16 Aligned_cols=47 Identities=19% Similarity=0.487 Sum_probs=39.8
Q ss_pred CCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 207 HDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 207 ~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
..||||+|. +. ++++++|||+|+..|+.+|++..+.+||+||.++..
T Consensus 24 l~C~IC~~~-~~---~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~ 70 (86)
T d1rmda2 24 ISCQICEHI-LA---DPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (86)
T ss_dssp TBCTTTCSB-CS---SEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cCCccCCcc-hh---cceecCCCChhhHHHHHHHHhhCCCcCcccCCCCCh
Confidence 479999995 43 367889999999999999997666789999998864
No 11
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=4.4e-10 Score=88.32 Aligned_cols=46 Identities=24% Similarity=0.786 Sum_probs=37.8
Q ss_pred CCCcccccccccCCceeEEcCCCCccchHHHHHHHhcC--CCCCCCCCcccC
Q 021060 207 HDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHH--QYACPICSKSVC 256 (318)
Q Consensus 207 ~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~--~~~CPiCrks~~ 256 (318)
..||||++. +. +++.++|||+||..||.+|+... ...||+||+++.
T Consensus 22 l~CpIC~~~-~~---~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (103)
T d1jm7a_ 22 LECPICLEL-IK---EPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (103)
T ss_dssp TSCSSSCCC-CS---SCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred cCCCccCch-hC---CeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCC
Confidence 579999985 44 24568999999999999999653 257999999885
No 12
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.84 E-value=1.6e-09 Score=81.38 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=41.7
Q ss_pred CCCCCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 204 AMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 204 ~~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
..+..||||++ ++. ++++++|||+|++.||.+|+...+.+||+||.++..
T Consensus 5 P~~l~CpIc~~-l~~---dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~ 54 (80)
T d2c2la2 5 PDYLCGKISFE-LMR---EPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 54 (80)
T ss_dssp CSTTBCTTTCS-BCS---SEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred CccccCcCcCc-hhh---hhcccCCcCeecHHHHHHHHhcCCccCCCccccccc
Confidence 45678999998 454 356889999999999999997666789999998863
No 13
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.74 E-value=1.8e-09 Score=76.48 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=37.6
Q ss_pred CCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 208 DCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 208 ~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
.||||++. +. +++....|||+|+++||.+|++. +.+||+||+++..
T Consensus 2 ~C~Ic~~~-~~--~Pv~~~~cGh~fc~~cI~~~l~~-~~~CP~c~~~l~~ 47 (56)
T d2baya1 2 LCAISGKV-PR--RPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLSI 47 (56)
T ss_dssp CCTTTCSC-CS--SEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCCG
T ss_pred CCccCCch-HH--hcCccCCCCCcccHHHHHHHHhh-ccCCCccCCcCCH
Confidence 59999995 44 35555579999999999999985 5789999998763
No 14
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.74 E-value=3.8e-09 Score=78.84 Aligned_cols=50 Identities=16% Similarity=0.472 Sum_probs=41.5
Q ss_pred CCCCCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 204 AMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 204 ~~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
..+..||||++. +. ++++++|||+|++.||.+|+......||+|+.++..
T Consensus 6 P~~l~CpIc~~~-m~---dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~ 55 (78)
T d1t1ha_ 6 PEYFRCPISLEL-MK---DPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSSCTTTSCC-CS---SEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred CccCCCcCcCch-hh---CceEccCCCcchHHHHHHHHHHCCCCCCcccccCCc
Confidence 456789999995 44 345789999999999999998666789999999863
No 15
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.69 E-value=1.1e-09 Score=78.06 Aligned_cols=42 Identities=31% Similarity=0.634 Sum_probs=35.0
Q ss_pred CCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccC
Q 021060 207 HDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVC 256 (318)
Q Consensus 207 ~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~ 256 (318)
..||||++. +. +++++||||+||..|+++| +.+||+||..+.
T Consensus 7 l~C~IC~~~-~~---~p~~lpCgH~fC~~Ci~~~----~~~CP~Cr~~~~ 48 (56)
T d1bora_ 7 LRCQQCQAE-AK---CPKLLPCLHTLCSGCLEAS----GMQCPICQAPWP 48 (56)
T ss_dssp SSCSSSCSS-CB---CCSCSTTSCCSBTTTCSSS----SSSCSSCCSSSS
T ss_pred CCCcccCcc-cC---CCEEecCCCHHhHHHHHcC----CCcCcCCCCccc
Confidence 589999985 43 3568899999999999765 467999999886
No 16
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66 E-value=4.9e-09 Score=81.33 Aligned_cols=45 Identities=22% Similarity=0.594 Sum_probs=36.3
Q ss_pred CCCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccC
Q 021060 206 HHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVC 256 (318)
Q Consensus 206 ~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~ 256 (318)
...||||++. |. +++...+|||+||..|+.+|+. .+||+||..+.
T Consensus 22 ~l~C~IC~~~-~~--~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~ 66 (97)
T d1jm7b_ 22 LLRCSRCTNI-LR--EPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAW 66 (97)
T ss_dssp TTSCSSSCSC-CS--SCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCS
T ss_pred cCCCccCCch-hh--cCceeCCCCCchhHHHHHHHHh---ccccccCCcCc
Confidence 4589999995 44 2455568999999999999985 46999998775
No 17
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.63 E-value=5.5e-09 Score=74.58 Aligned_cols=51 Identities=25% Similarity=0.436 Sum_probs=37.9
Q ss_pred CCCCCCCCcccccccccCCceeEEcCC-----CCccchHHHHHHHhc-CCCCCCCCCcccC
Q 021060 202 EGAMHHDCPVCCEYLFETRQDVIVLPC-----GHTIHKNCLKEMREH-HQYACPICSKSVC 256 (318)
Q Consensus 202 e~~~~~~CpIClE~lf~s~~~v~~LpC-----GH~fH~~Cl~~wl~~-~~~~CPiCrks~~ 256 (318)
|......|+||++.+ +. ..+.|| +|.||..||.+|++. .+.+||+||..+.
T Consensus 2 eded~~~C~IC~~~~-~~---~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 2 EDEDVPVCWICNEEL-GN---ERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp TTCSCCEETTTTEEC-SC---CCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCCCccCCccC-CC---ceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 445567899999863 32 223444 599999999999864 4578999999874
No 18
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.23 E-value=4e-07 Score=69.44 Aligned_cols=48 Identities=21% Similarity=0.413 Sum_probs=36.0
Q ss_pred CCCCCCcccccccccCCceeEEcCCCCccchHHHHHHHhc-------CCCCCCCCC
Q 021060 204 AMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREH-------HQYACPICS 252 (318)
Q Consensus 204 ~~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~-------~~~~CPiCr 252 (318)
+....||||++++ ...+.+..++|||.||..|+.+|++. ...+||.|+
T Consensus 3 ~~~~~C~IC~~~~-~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~ 57 (94)
T d1wima_ 3 SGSSGCKLCLGEY-PVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA 57 (94)
T ss_dssp CSBCCCSSSCCCC-BGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTT
T ss_pred CCCCcCccCCCcc-cCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCC
Confidence 3457899999964 43445566799999999999999853 124699865
No 19
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05 E-value=1.6e-06 Score=67.39 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=40.8
Q ss_pred CCCCCCCCcccccccccCCceeEEcCCC-CccchHHHHHHHhcCCCCCCCCCcccC
Q 021060 202 EGAMHHDCPVCCEYLFETRQDVIVLPCG-HTIHKNCLKEMREHHQYACPICSKSVC 256 (318)
Q Consensus 202 e~~~~~~CpIClE~lf~s~~~v~~LpCG-H~fH~~Cl~~wl~~~~~~CPiCrks~~ 256 (318)
+-..+..||||++ ++. +++++||| |+|.+.||.+||.. +.+||+|+.++.
T Consensus 18 ~~P~~f~CPI~~~-lm~---dPV~~~~~~~ty~r~~I~~~l~~-~~~~P~~~~~l~ 68 (98)
T d1wgma_ 18 DACDEFLDPIMST-LMC---DPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLT 68 (98)
T ss_dssp SCCTTTBCTTTCS-BCS---SEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCC
T ss_pred CCcHHhCCcCchh-HHH---HHHhcccccchhhHHHHHHHHHh-cCCccccccccc
Confidence 3455789999999 454 46788876 58999999999985 578999999986
No 20
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=89.05 E-value=0.022 Score=41.56 Aligned_cols=67 Identities=22% Similarity=0.452 Sum_probs=48.1
Q ss_pred CCCCCcccccccccCCceeEEcCCCCccchHHHHHHHhcCCCCCCCCCcccCchhHHHHHhHHHHHcCCCChhhhcCcce
Q 021060 205 MHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREHHQYACPICSKSVCDMSKVWEKYDREIAATPMPEAYLNKKVW 284 (318)
Q Consensus 205 ~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~~~~~CPiCrks~~d~~~~~~~lD~~i~~~pmPeey~~~~v~ 284 (318)
|+..||.|...|-... ||+.+..|-..+.. .-.||-|+.++..+. +-..++
T Consensus 1 m~~~CP~C~~eL~~~~--------~~~~C~~C~~~~~~--~a~CPdC~~~Le~Lk-------------------ACGAvd 51 (71)
T d2jnea1 1 MELHCPQCQHVLDQDN--------GHARCRSCGEFIEM--KALCPDCHQPLQVLK-------------------ACGAVD 51 (71)
T ss_dssp CCCBCSSSCSBEEEET--------TEEEETTTCCEEEE--EEECTTTCSBCEEEE-------------------ETTEEE
T ss_pred CCCcCCCccCcccccC--------CCEehhhhhhhhee--EEeCCccccHHHHHH-------------------hccchh
Confidence 4678999987543211 67777788777754 257999999887543 234589
Q ss_pred EEcCCCCC---Ccccccee
Q 021060 285 ILCNDCGK---TSNVQFHV 300 (318)
Q Consensus 285 IlCnDC~~---~s~v~~H~ 300 (318)
..|+.|++ ++.|.|++
T Consensus 52 YFC~~cn~LiSKkrv~f~~ 70 (71)
T d2jnea1 52 YFCQHGHGLISKKRVEFVL 70 (71)
T ss_dssp EEETTTTEEECTTTSEEEE
T ss_pred hhhccCCceeEeeeEEEEe
Confidence 99999994 77888874
No 21
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=88.97 E-value=0.084 Score=38.39 Aligned_cols=35 Identities=23% Similarity=0.665 Sum_probs=25.8
Q ss_pred eeecCCCCccccccccCcCCCCcc--------ceEecCccccc
Q 021060 121 QVICSLCGTEQKVQQVCVNCGVCM--------GEYFCESCKLF 155 (318)
Q Consensus 121 ~v~C~~C~~eQ~v~~~C~~Cg~~f--------~~YfC~~Ckl~ 155 (318)
..-|..|...-.....||.|+.++ +.|||..|+=.
T Consensus 18 ~~~C~~C~~~~~~~a~CPdC~~~Le~LkACGAvdYFC~~cn~L 60 (71)
T d2jnea1 18 HARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGL 60 (71)
T ss_dssp EEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEETTTTEE
T ss_pred CEehhhhhhhheeEEeCCccccHHHHHHhccchhhhhccCCce
Confidence 666777776666666777777766 78999999754
No 22
>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.56 E-value=0.26 Score=34.23 Aligned_cols=30 Identities=30% Similarity=0.810 Sum_probs=20.5
Q ss_pred EecCccccccCCCCCCeeecCCCCceeecC
Q 021060 147 YFCESCKLFDDDTSKKQYHCDGCGICRIGG 176 (318)
Q Consensus 147 YfC~~Ckl~ddd~~k~~yHC~~CgiCR~G~ 176 (318)
|-|+.|.+=--...++-|||+.||+|---.
T Consensus 18 yHC~~CgiCRvG~~~~ffHC~~C~~C~~~~ 47 (56)
T d2dkta2 18 YHCESCGICRIGPKEDFFHCLKCNLCLTTN 47 (56)
T ss_dssp EEETTTTEEEESCGGGEEEETTTTEEEEGG
T ss_pred ccCCCCCceeecCCccccccCccccccCcc
Confidence 555555544333467999999999997543
No 23
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=80.71 E-value=0.16 Score=35.07 Aligned_cols=52 Identities=27% Similarity=0.511 Sum_probs=33.5
Q ss_pred CCCCCCcccccccccCCceeE-EcCCCCccchHHHHHHHh----cCCCCCCCCCcccC
Q 021060 204 AMHHDCPVCCEYLFETRQDVI-VLPCGHTIHKNCLKEMRE----HHQYACPICSKSVC 256 (318)
Q Consensus 204 ~~~~~CpIClE~lf~s~~~v~-~LpCGH~fH~~Cl~~wl~----~~~~~CPiCrks~~ 256 (318)
.....|+||.+. .+.....+ =-.|+..||..|+..-.. ...|.||.|+....
T Consensus 4 ~~~~~C~~C~~~-~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~~~ 60 (64)
T d1we9a_ 4 GSSGQCGACGES-YAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp SSCCCCSSSCCC-CCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCcCcCcCCC-CCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCcCC
Confidence 456789999874 33222212 236899999999964211 24688999986543
No 24
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.36 E-value=0.4 Score=31.41 Aligned_cols=44 Identities=25% Similarity=0.696 Sum_probs=28.6
Q ss_pred CCcccccccccCCceeEEc--CCCCccchHHHHHHHhc---CCCCCCCCCcc
Q 021060 208 DCPVCCEYLFETRQDVIVL--PCGHTIHKNCLKEMREH---HQYACPICSKS 254 (318)
Q Consensus 208 ~CpIClE~lf~s~~~v~~L--pCGH~fH~~Cl~~wl~~---~~~~CPiCrks 254 (318)
.|.||... .+.. .+++ .|...||..|++.-+.. +...||.|+..
T Consensus 2 ~C~vC~~~--~~~~-~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~~ 50 (51)
T d1f62a_ 2 RCKVCRKK--GEDD-KLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCS--SCCS-CCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCcCcCCC--CCCC-CEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcCc
Confidence 47778652 2122 2222 68899999999986542 35679999853
No 25
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.99 E-value=0.42 Score=33.67 Aligned_cols=12 Identities=17% Similarity=0.551 Sum_probs=8.0
Q ss_pred CCCCeeecCCCC
Q 021060 159 TSKKQYHCDGCG 170 (318)
Q Consensus 159 ~~k~~yHC~~Cg 170 (318)
+....|||..|+
T Consensus 35 ~~~~~F~C~~C~ 46 (62)
T d1vd4a_ 35 PMTGTFRCTFCH 46 (62)
T ss_dssp TTTTEEBCSSSC
T ss_pred cCCCeEEecCCC
Confidence 346777777774
No 26
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.65 E-value=1.7 Score=32.41 Aligned_cols=57 Identities=18% Similarity=0.415 Sum_probs=43.5
Q ss_pred cCCCCCCCCcccccccccCCceeEEcC---CCCccchHHHHHHHhcCCCCCCCCCcccCc
Q 021060 201 VEGAMHHDCPVCCEYLFETRQDVIVLP---CGHTIHKNCLKEMREHHQYACPICSKSVCD 257 (318)
Q Consensus 201 ie~~~~~~CpIClE~lf~s~~~v~~Lp---CGH~fH~~Cl~~wl~~~~~~CPiCrks~~d 257 (318)
+.+.....|.||.|.+-.....-.++. |+--+++.|+.--++..+..||.|+..+..
T Consensus 11 ~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp CSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred hhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhh
Confidence 344567889999998755544444554 678899999998888788899999988754
No 27
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}
Probab=64.48 E-value=0.69 Score=28.90 Aligned_cols=26 Identities=27% Similarity=0.651 Sum_probs=18.8
Q ss_pred cCcCCCCccceEecCccccccCCCCCCeeecCCCC
Q 021060 136 VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCG 170 (318)
Q Consensus 136 ~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cg 170 (318)
.|++||..++.+| .+.|..--||.||
T Consensus 4 ~C~~CG~~Yh~~~---------~pPk~~g~CD~cg 29 (35)
T d1s3ga2 4 ICKVCGTSYHLLF---------NPPQVEGKCDKDG 29 (35)
T ss_dssp EETTTCCEEETTT---------BCCSBTTBCTTTC
T ss_pred CCcCcCchhcccc---------CCCCCCCccCCCC
Confidence 4777777777665 5667777788887
No 28
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=63.29 E-value=1.1 Score=31.85 Aligned_cols=48 Identities=29% Similarity=0.535 Sum_probs=30.4
Q ss_pred CCCCcccccccccCCceeEEc---CCCCccchHHHHH----HH----hcCCCCCCCCCcccC
Q 021060 206 HHDCPVCCEYLFETRQDVIVL---PCGHTIHKNCLKE----MR----EHHQYACPICSKSVC 256 (318)
Q Consensus 206 ~~~CpIClE~lf~s~~~v~~L---pCGH~fH~~Cl~~----wl----~~~~~~CPiCrks~~ 256 (318)
...| ||.+.. .. ...+.+ .|...||..|+.- +. ....|.||.|+.+-.
T Consensus 16 ~~~C-~C~~~~-~~-~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T d1wewa_ 16 KVRC-VCGNSL-ET-DSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCC-SSCCCC-CC-SCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred ccEe-ECCCcc-CC-CcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcCC
Confidence 4568 898742 22 233455 4999999999842 11 112589999986654
No 29
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=61.86 E-value=0.86 Score=28.45 Aligned_cols=26 Identities=38% Similarity=0.855 Sum_probs=18.0
Q ss_pred cCcCCCCccceEecCccccccCCCCCCeeecCCCC
Q 021060 136 VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCG 170 (318)
Q Consensus 136 ~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cg 170 (318)
.|++||+.++.+| .+.|..--||.||
T Consensus 4 ~C~~CG~~Yh~~~---------~pPk~~g~CD~cG 29 (35)
T d1zina2 4 ICRNCGATYHLIF---------HPPAKPGVCDKCG 29 (35)
T ss_dssp EETTTCCEEETTT---------BCCSSTTBCTTTC
T ss_pred CCcCcCchhcccc---------CCCCCCCcCCCCC
Confidence 4667777666555 5667777788887
No 30
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density lipoprotein receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.79 E-value=2.9 Score=26.22 Aligned_cols=33 Identities=27% Similarity=0.690 Sum_probs=26.3
Q ss_pred cceeeccCccceeecccc--ccccccCCCCCCCCcc
Q 021060 178 DNFFHCNKCRCCYSMLLK--NSHPCVEGAMHHDCPV 211 (318)
Q Consensus 178 ~~ffHC~~C~~C~s~~l~--~~H~Cie~~~~~~CpI 211 (318)
.+.|+|.. |.|++.++. +..-|..++.+.+|||
T Consensus 5 ~~~f~C~~-g~CI~~~~~CDg~~DC~DgsDE~~Cpv 39 (39)
T d2fcwb1 5 QAEFRCHD-GKCISRQFVCDSDRDCLDGSDEASCPV 39 (39)
T ss_dssp TTEEECTT-SCEEEGGGTTSSSCCSTTCTTTTTHHH
T ss_pred CCCEEcCC-CCEEcchhcCcCcCcCcCCchhcCCCC
Confidence 46889975 889998875 5667888888889886
No 31
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=57.50 E-value=0.99 Score=28.51 Aligned_cols=26 Identities=19% Similarity=0.116 Sum_probs=18.1
Q ss_pred cCcCCCCccceEecCccccccCCCCCCeeecCCCC
Q 021060 136 VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCG 170 (318)
Q Consensus 136 ~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cg 170 (318)
+|+.||+.++.+| .+.|..--||.||
T Consensus 4 vc~~cG~~Yh~~~---------~pPk~~g~CD~cg 29 (37)
T d2ak3a2 4 IHPGSGRVYNIEF---------NPPKTMGIDDLTG 29 (37)
T ss_dssp EETTTTEEEETTT---------BCCSSTTBCTTTC
T ss_pred eeCCcCChhhhcc---------CCccccCCccCCC
Confidence 4667777666555 5667777788887
No 32
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.51 E-value=1.4 Score=29.84 Aligned_cols=46 Identities=22% Similarity=0.485 Sum_probs=28.9
Q ss_pred CCCCcccccccccCCceeEEcCCCCccchHHHHHHHhc---CCCCCCCCCccc
Q 021060 206 HHDCPVCCEYLFETRQDVIVLPCGHTIHKNCLKEMREH---HQYACPICSKSV 255 (318)
Q Consensus 206 ~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl~~wl~~---~~~~CPiCrks~ 255 (318)
...|.||.+. .+-+.==.|.-.||..|+...+.. ..+.||.|+.+.
T Consensus 9 ~~~C~~C~~~----g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~ 57 (61)
T d1mm2a_ 9 MEFCRVCKDG----GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCCC----SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred cCCCcCCCCC----CeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCcc
Confidence 4467777642 211111157899999999765542 457899998654
No 33
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}
Probab=52.77 E-value=1.3 Score=27.53 Aligned_cols=26 Identities=23% Similarity=0.184 Sum_probs=16.7
Q ss_pred cCcCCCCccceEecCccccccCCCCCCeeecCCCC
Q 021060 136 VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCG 170 (318)
Q Consensus 136 ~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cg 170 (318)
.|++||+.++.+| .+.|..--||.||
T Consensus 4 ~c~~cG~~Yh~~~---------~PPk~~g~CD~cg 29 (35)
T d1e4va2 4 VHAPSGRVYHVKF---------NPPKVEGKDDVTG 29 (35)
T ss_dssp EETTTTEEEETTT---------BCCSSTTBCTTTC
T ss_pred CCcCcCChhhhcc---------CccccCCcccCCC
Confidence 4666666665554 4566667777776
No 34
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.76 E-value=1.8 Score=27.34 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=17.3
Q ss_pred cCcCCCCccceEecCccccccCCCCCCeeecCCCC
Q 021060 136 VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCG 170 (318)
Q Consensus 136 ~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cg 170 (318)
.|+.||+.++.+| .+.|..--||.||
T Consensus 4 ~C~~cG~~Yh~~~---------~ppk~~g~CD~cg 29 (38)
T d1akya2 4 IHPASGRSYHKIF---------NPPKEDMKDDVTG 29 (38)
T ss_dssp ECTTTCCEEETTT---------BCCSSTTBCTTTC
T ss_pred CCcCccchhhhhc---------cCcCcCCccCCCC
Confidence 4667777666555 4566666777776
No 35
>d1pfva3 g.41.1.1 (A:141-175) Methionyl-tRNA synthetase (MetRS), Zn-domain {Escherichia coli [TaxId: 562]}
Probab=49.35 E-value=4 Score=25.39 Aligned_cols=23 Identities=22% Similarity=0.651 Sum_probs=19.5
Q ss_pred ecCCCCccccccccCcCCCCccc
Q 021060 123 ICSLCGTEQKVQQVCVNCGVCMG 145 (318)
Q Consensus 123 ~C~~C~~eQ~v~~~C~~Cg~~f~ 145 (318)
.|..|+.+..++..|.+||+.+.
T Consensus 4 ~CP~C~~~~a~GDqCe~CG~~~~ 26 (35)
T d1pfva3 4 TCPKCKSPDQYGDNCEVCGATYS 26 (35)
T ss_dssp ECTTTCCSSEETTBCTTTCCBCC
T ss_pred ECCCCCCcccccccHHHcCCcCC
Confidence 58889999889999999998763
No 36
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=48.62 E-value=4.3 Score=25.63 Aligned_cols=20 Identities=30% Similarity=0.959 Sum_probs=13.1
Q ss_pred cccCcCCCCcc--------ceEecCccc
Q 021060 134 QQVCVNCGVCM--------GEYFCESCK 153 (318)
Q Consensus 134 ~~~C~~Cg~~f--------~~YfC~~Ck 153 (318)
++.|+.||... +.|||+.|.
T Consensus 12 g~pC~~C~~~I~~~~~~gR~t~~Cp~CQ 39 (40)
T d1k3xa3 12 GEPCERCGSIIEKTTLSSRPFYWCPGCQ 39 (40)
T ss_dssp TSBCTTTCCBCEEEEETTEEEEECTTTC
T ss_pred CCccCcCCCEEEEEEECCCCCEEChhhC
Confidence 35577777666 567777774
No 37
>d1rqga3 g.41.1.1 (A:139-173) Methionyl-tRNA synthetase (MetRS), Zn-domain {Pyrococcus abyssi [TaxId: 29292]}
Probab=45.86 E-value=5.2 Score=24.82 Aligned_cols=22 Identities=32% Similarity=0.847 Sum_probs=17.5
Q ss_pred ecCCCCccccccccCcCCCCcc
Q 021060 123 ICSLCGTEQKVQQVCVNCGVCM 144 (318)
Q Consensus 123 ~C~~C~~eQ~v~~~C~~Cg~~f 144 (318)
.|..|+.+..++..|.+||+.+
T Consensus 4 ~CP~C~~~~a~GDqCe~CG~~~ 25 (35)
T d1rqga3 4 TCPYCGAEDQKGDQCEVCGRPL 25 (35)
T ss_dssp BCSSSCCSCCCTTTCSSSCCCC
T ss_pred ECCCCCCCcccCcchhhcCCcc
Confidence 4777888888888888888765
No 38
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.47 E-value=8.6 Score=26.92 Aligned_cols=47 Identities=19% Similarity=0.499 Sum_probs=29.2
Q ss_pred CCCcccccccccCCceeEEc--CCCCccchHHHHH--H-Hh-cCCCCCCCCCcccC
Q 021060 207 HDCPVCCEYLFETRQDVIVL--PCGHTIHKNCLKE--M-RE-HHQYACPICSKSVC 256 (318)
Q Consensus 207 ~~CpIClE~lf~s~~~v~~L--pCGH~fH~~Cl~~--w-l~-~~~~~CPiCrks~~ 256 (318)
.-| ||.+. ++. ...++. .|.-.||..|+.. . +. ...|.||.|+....
T Consensus 13 v~C-iC~~~-~~~-~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~g 65 (79)
T d1wepa_ 13 VYC-LCRQP-YNV-NHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCS-TTSCS-CCS-SSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred eEe-ECCCc-cCC-CCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCcC
Confidence 345 88763 222 222332 6889999999952 2 22 23589999987654
No 39
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.32 E-value=3.9 Score=28.21 Aligned_cols=30 Identities=17% Similarity=0.531 Sum_probs=22.8
Q ss_pred CCCCccchHHHHHHHhc---CCCCCCCCCcccC
Q 021060 227 PCGHTIHKNCLKEMREH---HQYACPICSKSVC 256 (318)
Q Consensus 227 pCGH~fH~~Cl~~wl~~---~~~~CPiCrks~~ 256 (318)
.|...||..|+...+.. +...||.|+....
T Consensus 24 ~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 24 QCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp TSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence 58899999999976542 3567999976543
No 40
>d1tdza3 g.39.1.8 (A:225-271) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=43.14 E-value=5.6 Score=25.80 Aligned_cols=19 Identities=37% Similarity=1.100 Sum_probs=12.2
Q ss_pred ccCcCCCCcc--------ceEecCccc
Q 021060 135 QVCVNCGVCM--------GEYFCESCK 153 (318)
Q Consensus 135 ~~C~~Cg~~f--------~~YfC~~Ck 153 (318)
+.|+.||... +.|||+.|.
T Consensus 19 ~~C~~C~~~I~~~~~~gR~t~~Cp~CQ 45 (47)
T d1tdza3 19 EKCSRCGAEIQKIKVAGRGTHFCPVCQ 45 (47)
T ss_dssp SBCTTTCCBCEEEEETTEEEEECTTTS
T ss_pred CCcCCCCcEEEEEEECCcccEECcccc
Confidence 4566666655 567777773
No 41
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=42.94 E-value=5.7 Score=25.43 Aligned_cols=18 Identities=28% Similarity=1.089 Sum_probs=11.6
Q ss_pred ccCcCCCCcc--------ceEecCcc
Q 021060 135 QVCVNCGVCM--------GEYFCESC 152 (318)
Q Consensus 135 ~~C~~Cg~~f--------~~YfC~~C 152 (318)
+.|+.||... +.|||+.|
T Consensus 17 ~~C~~C~~~I~~~~~~~R~t~~Cp~C 42 (44)
T d1k82a3 17 EPCRVCGTPIVATKHAQRATFYCRQC 42 (44)
T ss_dssp SBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred CCcCCCCCEEEEEEECCcccEEChhh
Confidence 4567776666 45677766
No 42
>d2k4xa1 g.41.8.8 (A:1-55) Ribosomal protein S27ae {Thermoplasma acidophilum [TaxId: 2303]}
Probab=42.88 E-value=6.9 Score=26.58 Aligned_cols=22 Identities=27% Similarity=0.785 Sum_probs=15.4
Q ss_pred cccCcCCCC--c----cceEecCccccc
Q 021060 134 QQVCVNCGV--C----MGEYFCESCKLF 155 (318)
Q Consensus 134 ~~~C~~Cg~--~----f~~YfC~~Ckl~ 155 (318)
...||+||. = ++|++|.+|.+-
T Consensus 18 ~k~CP~CG~GvFmA~H~dR~~CGKCgyT 45 (55)
T d2k4xa1 18 HRFCPRCGPGVFLAEHADRYSCGRCGYT 45 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCC
T ss_pred cCcCcCCCCcEEeeecCCCccccCCccc
Confidence 457999965 2 267888888654
No 43
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.41 E-value=12 Score=24.83 Aligned_cols=48 Identities=25% Similarity=0.563 Sum_probs=25.5
Q ss_pred ecCCCCceeecCCcceeeccCccceeeccccccccccCCCCCCCCccccc
Q 021060 165 HCDGCGICRIGGCDNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCE 214 (318)
Q Consensus 165 HC~~CgiCR~G~~~~ffHC~~C~~C~s~~l~~~H~Cie~~~~~~CpIClE 214 (318)
|.+.|.+|+.++ +..-|+.|+..|-..=.+...=......-.||.|..
T Consensus 8 ~~~~C~~C~~~g--~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~ 55 (61)
T d1mm2a_ 8 HMEFCRVCKDGG--ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 55 (61)
T ss_dssp SCSSCTTTCCCS--SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTT
T ss_pred CcCCCcCCCCCC--eEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcC
Confidence 445677887653 578888887766543111000001123456888764
No 44
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.91 E-value=7.8 Score=34.07 Aligned_cols=30 Identities=23% Similarity=0.510 Sum_probs=24.3
Q ss_pred CceeecCCCCccccc-cccCcCCCCccceEe
Q 021060 119 VNQVICSLCGTEQKV-QQVCVNCGVCMGEYF 148 (318)
Q Consensus 119 v~~v~C~~C~~eQ~v-~~~C~~Cg~~f~~Yf 148 (318)
.+-..|+.|+++-.+ -..|++||..-..-|
T Consensus 188 ~R~l~C~~C~teW~~~R~~C~~Cg~~~~~~~ 218 (290)
T d2fiya1 188 LRYLSCSLCACEWHYVRIKCSHCEESKHLAY 218 (290)
T ss_dssp EEEEEETTTCCEEECCTTSCSSSCCCSCCEE
T ss_pred ceEEECCCCCCccccccccCCCCCCCCCcce
Confidence 356899999999876 478999998876654
No 45
>d1r2za3 g.39.1.8 (A:229-274) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=38.96 E-value=7.2 Score=25.10 Aligned_cols=18 Identities=33% Similarity=1.076 Sum_probs=11.5
Q ss_pred ccCcCCCCcc--------ceEecCcc
Q 021060 135 QVCVNCGVCM--------GEYFCESC 152 (318)
Q Consensus 135 ~~C~~Cg~~f--------~~YfC~~C 152 (318)
+.|+.||... +.|||+.|
T Consensus 19 ~~C~~C~~~I~~~~~~gR~t~~Cp~C 44 (46)
T d1r2za3 19 NPCKRCGTPIEKTVVAGRGTHYCPRC 44 (46)
T ss_dssp SBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred CccCCCCCeEEEEEECCCcCEEChhh
Confidence 4566666655 56777777
No 46
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.95 E-value=8.7 Score=26.72 Aligned_cols=44 Identities=20% Similarity=0.526 Sum_probs=26.2
Q ss_pred CCCcccccccccCCceeEEcC---C-CCccchHHHHHHHh--cCCCCCCCCCccc
Q 021060 207 HDCPVCCEYLFETRQDVIVLP---C-GHTIHKNCLKEMRE--HHQYACPICSKSV 255 (318)
Q Consensus 207 ~~CpIClE~lf~s~~~v~~Lp---C-GH~fH~~Cl~~wl~--~~~~~CPiCrks~ 255 (318)
.-| ||.+.. .. ..+..- | ...||..|+. +.. .+.+.||.|+..-
T Consensus 17 ~~C-iC~~~~--~~-~~i~c~~~~C~~~wfH~~Cvg-l~~~p~~~w~C~~C~~~~ 66 (71)
T d1wesa_ 17 TYC-LCNQVS--YG-EMIGCDNEQCPIEWFHFSCVS-LTYKPKGKWYCPKCRGDS 66 (71)
T ss_dssp CCS-TTCCCC--CS-SEECCSCTTCSCCCEETTTTT-CSSCCSSCCCCTTTSSCC
T ss_pred CEE-EeCCCC--CC-CEEEEECCCCCCcCccCccCC-CCcCCCCcEECcCCcccc
Confidence 456 898642 12 223332 3 4579999985 221 2468899998643
No 47
>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}
Probab=34.32 E-value=18 Score=24.42 Aligned_cols=29 Identities=17% Similarity=0.516 Sum_probs=22.7
Q ss_pred CCccCceeecCCCCccccc-cccCcCCCCc
Q 021060 115 PRHEVNQVICSLCGTEQKV-QQVCVNCGVC 143 (318)
Q Consensus 115 dR~~v~~v~C~~C~~eQ~v-~~~C~~Cg~~ 143 (318)
..+....++|+.|+...|+ +..|..||..
T Consensus 13 ~k~~~~k~ICrkC~AR~p~rAt~CRKCg~~ 42 (56)
T d2ayja1 13 QQRVFLKKVCRKCGALNPIRATKCRRCHST 42 (56)
T ss_dssp TTCSCCCEEETTTCCEECTTCSSCTTTCCC
T ss_pred HHHhhhhHHHhhccccCCccccccccCCCC
Confidence 3444578999999999888 5779888874
No 48
>d2bi6h1 g.3.12.1 (H:8-31) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=32.95 E-value=6.8 Score=22.26 Aligned_cols=15 Identities=33% Similarity=1.034 Sum_probs=12.9
Q ss_pred ccCcCCCCccceEec
Q 021060 135 QVCVNCGVCMGEYFC 149 (318)
Q Consensus 135 ~~C~~Cg~~f~~YfC 149 (318)
..|..|.+.||+|.|
T Consensus 9 gfcktckaefgkyic 23 (26)
T d2bi6h1 9 GFCKTCKAEFGKYIC 23 (26)
T ss_dssp TTCSSBCCBTTBCCB
T ss_pred hHHHHHHHHhCceee
Confidence 568889999999977
No 49
>d1ryqa_ g.41.9.3 (A:) putative DNA-directed RNA polymerase subunit E'' (RpoE2) {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.84 E-value=11 Score=26.26 Aligned_cols=23 Identities=22% Similarity=0.518 Sum_probs=16.7
Q ss_pred CceeecCCCCccccccccCcCCCC
Q 021060 119 VNQVICSLCGTEQKVQQVCVNCGV 142 (318)
Q Consensus 119 v~~v~C~~C~~eQ~v~~~C~~Cg~ 142 (318)
.++-.|..|+..++. +.|||||.
T Consensus 7 ~~~rAC~~C~~i~~~-~~CpnC~s 29 (67)
T d1ryqa_ 7 SSEKACRHCHYITSE-DRCPVCGS 29 (67)
T ss_dssp --CEEETTTCBEESS-SSCTTTCC
T ss_pred ccChhHhhCCCccCC-CCCCCCcC
Confidence 456789999988775 45999974
No 50
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.51 E-value=15 Score=26.32 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=27.8
Q ss_pred CCCCCCCcccccccccCCceeEEcCC----CCccchHHHHHHHhc
Q 021060 203 GAMHHDCPVCCEYLFETRQDVIVLPC----GHTIHKNCLKEMREH 243 (318)
Q Consensus 203 ~~~~~~CpIClE~lf~s~~~v~~LpC----GH~fH~~Cl~~wl~~ 243 (318)
++....|.+|.|.|-+ ...+.| +|.|+-.|-+..++.
T Consensus 5 ~~~~l~CtlC~erLEd----tHFVQCPsv~~HkFCFpCsr~sik~ 45 (80)
T d2cs3a1 5 NSGPLCCTICHERLED----THFVQCPSVPSHKFCFPCSRESIKA 45 (80)
T ss_dssp SCCSCCCSSSCSCCSS----TTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCCceeeeeehhhhcC----CceEeCCCCcCCceeccccHHHHHh
Confidence 4556789999997544 234445 799999999999873
No 51
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=27.59 E-value=14 Score=24.57 Aligned_cols=9 Identities=44% Similarity=1.361 Sum_probs=6.3
Q ss_pred ceEecCccc
Q 021060 145 GEYFCESCK 153 (318)
Q Consensus 145 ~~YfC~~Ck 153 (318)
+.|||+.|.
T Consensus 44 ~t~~Cp~CQ 52 (56)
T d1ee8a3 44 GTHFCPTCQ 52 (56)
T ss_dssp EEEECTTTT
T ss_pred cCEECcCcc
Confidence 567787774
No 52
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.41 E-value=8.4 Score=23.95 Aligned_cols=32 Identities=25% Similarity=0.608 Sum_probs=20.0
Q ss_pred CCCCCCCcccccccccCCceeEEcCCCCccchHHH
Q 021060 203 GAMHHDCPVCCEYLFETRQDVIVLPCGHTIHKNCL 237 (318)
Q Consensus 203 ~~~~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl 237 (318)
....+.|.+|...++.- +. +..=|+.||+.|+
T Consensus 5 ~g~~~~C~~C~K~VY~~-Er--l~a~g~~yHk~CF 36 (36)
T d2co8a2 5 AGAGDLCALCGEHLYVL-ER--LCVNGHFFHRSCF 36 (36)
T ss_dssp CCSSCBCSSSCCBCCTT-TB--CCBTTBCCBTTTC
T ss_pred CCCCCcccccCCEEeee-eE--EEecCcEeccccC
Confidence 34567889998655442 11 1222899999885
No 53
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.40 E-value=17 Score=26.56 Aligned_cols=32 Identities=28% Similarity=0.813 Sum_probs=24.6
Q ss_pred CCCCCCcccccccccCCceeEEcC---CCCccchHHHHHH
Q 021060 204 AMHHDCPVCCEYLFETRQDVIVLP---CGHTIHKNCLKEM 240 (318)
Q Consensus 204 ~~~~~CpIClE~lf~s~~~v~~Lp---CGH~fH~~Cl~~w 240 (318)
..+..|+||. .++... .+| |+-.||..||+..
T Consensus 13 ~~D~mC~vC~--v~t~~~---l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 13 VNDEMCDVCE--VWTAES---LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTTC--CCCSSC---CSSCSSSSSCCCHHHHHHH
T ss_pred CcCccccccC--cccccc---eecceeecchhhHHHHHHh
Confidence 4578999995 576533 456 5899999999997
No 54
>d1b8ta3 g.39.1.3 (A:101-143) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=26.19 E-value=7.8 Score=24.84 Aligned_cols=29 Identities=31% Similarity=0.799 Sum_probs=20.3
Q ss_pred CCCCcccccccccCCceeEEcCCCCccchHHH
Q 021060 206 HHDCPVCCEYLFETRQDVIVLPCGHTIHKNCL 237 (318)
Q Consensus 206 ~~~CpIClE~lf~s~~~v~~LpCGH~fH~~Cl 237 (318)
...|+.|...++.- +.+... |+.||+.|+
T Consensus 15 ~~kC~~C~k~VY~~-E~~~~~--g~~~Hk~CF 43 (43)
T d1b8ta3 15 SDGCPRCGQAVYAA-EKVIGA--GKSWHKSCF 43 (43)
T ss_dssp CEECTTTSCEECSS-SCEEET--TEEECTTTC
T ss_pred CCcCccCCCEeeHH-HHhhcC--CCccccCCC
Confidence 36799998776653 333333 999999985
No 55
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=25.13 E-value=12 Score=25.50 Aligned_cols=29 Identities=28% Similarity=0.677 Sum_probs=21.9
Q ss_pred ceEEcCCCCCCccccceeeeccCCCCCCcccccc
Q 021060 283 VWILCNDCGKTSNVQFHVLAQKCPNCKSYNTRLT 316 (318)
Q Consensus 283 v~IlCnDC~~~s~v~~H~lg~KC~~C~SyNT~~~ 316 (318)
..+.|..|++. ..-|- -|+.||-|+-+|+
T Consensus 28 ~l~~C~~CG~~--~~pHr---vC~~CG~YkGr~V 56 (59)
T d2j0151 28 TLVPCPECKAM--KPPHT---VCPECGYYAGRKV 56 (59)
T ss_dssp CCBCCSSSSSC--BCTTC---BCTTTCCSSSCCS
T ss_pred ceeECCCCCCc--cccee---ECCCCCeECCEEe
Confidence 35679999974 33454 4999999999886
No 56
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.99 E-value=11 Score=21.61 Aligned_cols=10 Identities=50% Similarity=1.135 Sum_probs=7.2
Q ss_pred CeeecCCCCc
Q 021060 162 KQYHCDGCGI 171 (318)
Q Consensus 162 ~~yHC~~Cgi 171 (318)
+||.|+.||-
T Consensus 1 KPy~C~eCgK 10 (26)
T d1x6ea2 1 KPYKCLECGK 10 (26)
T ss_dssp CCEECSSSCC
T ss_pred CCccCCCCcC
Confidence 4788888874
No 57
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=24.92 E-value=18 Score=20.94 Aligned_cols=16 Identities=13% Similarity=0.758 Sum_probs=12.6
Q ss_pred CCCCCCCCcccCchhH
Q 021060 245 QYACPICSKSVCDMSK 260 (318)
Q Consensus 245 ~~~CPiCrks~~d~~~ 260 (318)
-|.||+|.+.+...+.
T Consensus 2 p~~C~~C~k~F~~~~~ 17 (29)
T d2adra1 2 SFVCEVCTRAFARQEH 17 (29)
T ss_dssp CBCCTTTCCCBSCHHH
T ss_pred cCCCCCCCCCCCCchH
Confidence 3789999999986543
No 58
>d1neea2 g.59.1.1 (A:99-135) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.78 E-value=5.6 Score=24.93 Aligned_cols=14 Identities=29% Similarity=0.674 Sum_probs=10.2
Q ss_pred ccCCCCCCcccccc
Q 021060 303 QKCPNCKSYNTRLT 316 (318)
Q Consensus 303 ~KC~~C~SyNT~~~ 316 (318)
..|+.|+|.||..+
T Consensus 2 V~C~~C~spDT~l~ 15 (37)
T d1neea2 2 VICHECNRPDTRII 15 (37)
T ss_dssp HHHTCCSSCSSCCE
T ss_pred eECCCCCCCCCEEE
Confidence 35778888888765
No 59
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.49 E-value=21 Score=24.91 Aligned_cols=22 Identities=18% Similarity=0.641 Sum_probs=9.7
Q ss_pred ecCccccccCCCCCCeeecCCC
Q 021060 148 FCESCKLFDDDTSKKQYHCDGC 169 (318)
Q Consensus 148 fC~~Ckl~ddd~~k~~yHC~~C 169 (318)
+|.+|+-..++.....-.|+.|
T Consensus 18 ~C~iC~~~~~~~~~~~v~Cd~C 39 (88)
T d1weva_ 18 ACVVCRQMTVASGNQLVECQEC 39 (88)
T ss_dssp SCSSSCCCCCCTTCCEEECSSS
T ss_pred CccCCCCccCCCCCeEEEcCCC
Confidence 3445543333333345555555
No 60
>d2zjrz1 g.41.8.5 (Z:2-59) Ribosomal protein L32p {Deinococcus radiodurans [TaxId: 1299]}
Probab=24.28 E-value=19 Score=24.28 Aligned_cols=29 Identities=31% Similarity=0.652 Sum_probs=22.3
Q ss_pred ceEEcCCCCCCccccceeeeccCCCCCCcccccc
Q 021060 283 VWILCNDCGKTSNVQFHVLAQKCPNCKSYNTRLT 316 (318)
Q Consensus 283 v~IlCnDC~~~s~v~~H~lg~KC~~C~SyNT~~~ 316 (318)
..+.|..|++. ...| .-|+.||-||-+++
T Consensus 28 ~l~~C~~CG~~--~lpH---rvC~~CG~YkGr~V 56 (58)
T d2zjrz1 28 NLTECPQCHGK--KLSH---HICPNCGYYDGRQV 56 (58)
T ss_dssp CCEECTTTCCE--ECTT---BCCTTTCBSSSBCS
T ss_pred ceeECCCCCCC--ccce---eeCCCCCcCCCEEe
Confidence 46779999974 3334 46999999999886
No 61
>d1k81a_ g.59.1.1 (A:) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=23.65 E-value=10 Score=23.52 Aligned_cols=14 Identities=21% Similarity=0.693 Sum_probs=11.6
Q ss_pred cCCCCCCccccccC
Q 021060 304 KCPNCKSYNTRLTR 317 (318)
Q Consensus 304 KC~~C~SyNT~~~~ 317 (318)
.|+.|+|.||..++
T Consensus 2 ~C~~C~spDT~l~k 15 (36)
T d1k81a_ 2 ICRECGKPDTKIIK 15 (36)
T ss_dssp CCSSSCSCEEEEEE
T ss_pred CCCCCCCCCCEEEE
Confidence 58999999998763
No 62
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.40 E-value=18 Score=24.99 Aligned_cols=24 Identities=33% Similarity=0.790 Sum_probs=14.8
Q ss_pred ccCcCCCCccceEecCccccccCCCCCCeeecCCCCc
Q 021060 135 QVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGI 171 (318)
Q Consensus 135 ~~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cgi 171 (318)
..|..|+..|+.. +...||..||.
T Consensus 14 ~~C~~C~~~F~~~-------------~rrhhCr~CG~ 37 (72)
T d1dvpa2 14 RVCHRCRVEFTFT-------------NRKHHCRNCGQ 37 (72)
T ss_dssp SBCTTTCCBCCSS-------------SCCEECTTTCC
T ss_pred CccccCCCcccCc-------------cccccccccCC
Confidence 3577777777432 35677777763
No 63
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.09 E-value=16 Score=24.81 Aligned_cols=23 Identities=30% Similarity=0.944 Sum_probs=16.4
Q ss_pred ccCcCCCCccceEecCccccccCCCCCCeeecCCCC
Q 021060 135 QVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCG 170 (318)
Q Consensus 135 ~~C~~Cg~~f~~YfC~~Ckl~ddd~~k~~yHC~~Cg 170 (318)
+.|..|+..|+ || +...||-.||
T Consensus 6 ~~C~~C~~~F~--------~~-----~rkhhCr~CG 28 (67)
T d1vfya_ 6 DACMICSKKFS--------LL-----NRKHHCRSCG 28 (67)
T ss_dssp SBCTTTCCBCB--------TT-----BCCEECTTTC
T ss_pred cccccCCCccc--------Cc-----ccccccccCC
Confidence 46888888884 33 3468888887
No 64
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}
Probab=22.90 E-value=21 Score=23.88 Aligned_cols=11 Identities=18% Similarity=0.643 Sum_probs=5.7
Q ss_pred CCCeeecCCCC
Q 021060 160 SKKQYHCDGCG 170 (318)
Q Consensus 160 ~k~~yHC~~Cg 170 (318)
.++-|.|..|+
T Consensus 33 ~~~g~~C~~C~ 43 (66)
T d1tbna_ 33 VHQGMKCSCCE 43 (66)
T ss_dssp SSSCEEETTTC
T ss_pred ccCccccCccc
Confidence 34455555554
No 65
>d1qxfa_ g.41.8.4 (A:) Ribosomal protein S27e {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.63 E-value=22 Score=24.17 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=23.2
Q ss_pred eeecCCCCccccc------cccCcCCCCccceEecCcccc
Q 021060 121 QVICSLCGTEQKV------QQVCVNCGVCMGEYFCESCKL 154 (318)
Q Consensus 121 ~v~C~~C~~eQ~v------~~~C~~Cg~~f~~YfC~~Ckl 154 (318)
.|.|..|+.+|-+ .-.|..||..+++-.=++-+|
T Consensus 7 ~VkC~~C~n~~ivFsha~t~V~C~~Cg~~L~~PtGGKa~i 46 (58)
T d1qxfa_ 7 KVKCPDCEHEQVIFDHPSTIVKCIICGRTVAEPTGGKGNI 46 (58)
T ss_dssp EEECTTTCCEEEEESSCSSCEECSSSCCEEEECCSSSCEE
T ss_pred EeECCCCCCeEEEEecCceEEEccccCCEEeccCCCeEEE
Confidence 5778888888775 135888888777665555444
No 66
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.76 E-value=24 Score=23.17 Aligned_cols=10 Identities=30% Similarity=0.956 Sum_probs=5.6
Q ss_pred CCeeecCCCC
Q 021060 161 KKQYHCDGCG 170 (318)
Q Consensus 161 k~~yHC~~Cg 170 (318)
+-.|+|+.|+
T Consensus 4 ~~~~tCd~C~ 13 (52)
T d1tota1 4 RFVYTCNECK 13 (52)
T ss_dssp SSCEEETTTT
T ss_pred ceEEECcCCC
Confidence 4456666665
No 67
>d1lkoa2 g.41.5.1 (A:148-191) Rubrerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=20.63 E-value=18 Score=23.23 Aligned_cols=28 Identities=18% Similarity=0.508 Sum_probs=19.4
Q ss_pred cCceeecCCCCcccc---ccccCcCCCCccc
Q 021060 118 EVNQVICSLCGTEQK---VQQVCVNCGVCMG 145 (318)
Q Consensus 118 ~v~~v~C~~C~~eQ~---v~~~C~~Cg~~f~ 145 (318)
....-+|..|+.... +-+.||.|+++-+
T Consensus 5 ~~~~W~C~~CGyi~~g~~aP~~CPvC~~p~~ 35 (44)
T d1lkoa2 5 QATKWRCRNCGYVHEGTGAPELCPACAHPKA 35 (44)
T ss_dssp EEEEEEETTTCCEEEEEECCSBCTTTCCBGG
T ss_pred CCeEEEcCCCCcEEECCCCCCcCCCCCCcHH
Confidence 345678999987743 2367999988654
No 68
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=20.62 E-value=12 Score=24.19 Aligned_cols=25 Identities=24% Similarity=0.511 Sum_probs=16.1
Q ss_pred CCccchHHHHHHH-hcCCCCCCCCCc
Q 021060 229 GHTIHKNCLKEMR-EHHQYACPICSK 253 (318)
Q Consensus 229 GH~fH~~Cl~~wl-~~~~~~CPiCrk 253 (318)
.-.||..|+.--. ..+.+.||.|++
T Consensus 25 ~~WfH~~Cvgl~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 25 IEWFHFACVGLTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp SCEEEGGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCEeCCccCCCcCCCCcEECcCCCC
Confidence 4569999996211 113577888875
No 69
>d1x4sa1 g.85.1.2 (A:8-53) Zinc finger HIT domain containing protein 2, ZNHIT2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.35 E-value=19 Score=23.30 Aligned_cols=20 Identities=25% Similarity=0.546 Sum_probs=13.7
Q ss_pred ccCcCCCCccceEecCcccc
Q 021060 135 QVCVNCGVCMGEYFCESCKL 154 (318)
Q Consensus 135 ~~C~~Cg~~f~~YfC~~Ckl 154 (318)
..|.-|...-++|.|+.|..
T Consensus 8 ~lC~vC~~~~~KY~CP~C~~ 27 (46)
T d1x4sa1 8 GFCPAGEVQPARYTCPRCNA 27 (46)
T ss_dssp CSSCTTCCEEECEECTTTCC
T ss_pred ccChhhhCccccccCCCCCC
Confidence 34666777777777777754
Done!