Query 021062
Match_columns 318
No_of_seqs 305 out of 2019
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:18:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021062.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021062hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02731 Putative lipid phosph 100.0 2.5E-62 5.5E-67 456.1 27.7 311 1-318 21-333 (333)
2 PLN02250 lipid phosphate phosp 100.0 7.6E-60 1.6E-64 438.3 30.3 285 1-285 2-288 (314)
3 PLN02715 lipid phosphate phosp 100.0 2.2E-58 4.8E-63 429.7 29.5 266 1-266 27-292 (327)
4 KOG3030 Lipid phosphate phosph 100.0 5.2E-46 1.1E-50 345.0 25.5 256 6-264 2-283 (317)
5 cd03390 PAP2_containing_1_like 100.0 5.1E-34 1.1E-38 250.8 17.9 189 54-242 1-193 (193)
6 cd03384 PAP2_wunen PAP2, wunen 100.0 4.4E-28 9.6E-33 204.8 12.5 137 99-237 6-148 (150)
7 PRK10699 phosphatidylglyceroph 99.9 1.8E-22 3.8E-27 181.7 15.4 147 86-242 66-230 (244)
8 cd03396 PAP2_like_6 PAP2_like_ 99.9 8E-22 1.7E-26 173.9 17.6 134 93-241 63-196 (197)
9 cd03392 PAP2_like_2 PAP2_like_ 99.9 2.9E-21 6.2E-26 168.1 17.0 116 99-242 64-179 (182)
10 cd03382 PAP2_dolichyldiphospha 99.9 3.9E-21 8.4E-26 163.9 16.9 116 99-239 44-159 (159)
11 cd03389 PAP2_lipid_A_1_phospha 99.9 4.7E-21 1E-25 167.5 16.5 117 98-242 70-186 (186)
12 cd03385 PAP2_BcrC_like PAP2_li 99.9 7.9E-21 1.7E-25 159.4 16.2 109 99-239 35-143 (144)
13 cd03391 PAP2_containing_2_like 99.9 6.8E-21 1.5E-25 162.4 15.7 112 96-237 46-157 (159)
14 cd03383 PAP2_diacylglycerolkin 99.9 3.6E-21 7.9E-26 153.5 13.0 96 102-241 13-108 (109)
15 cd03395 PAP2_like_4 PAP2_like_ 99.9 1.3E-20 2.9E-25 163.4 17.2 112 103-242 63-174 (177)
16 cd03388 PAP2_SPPase1 PAP2_like 99.9 1.9E-20 4.2E-25 158.3 15.5 112 102-237 38-149 (151)
17 cd03394 PAP2_like_5 PAP2_like_ 99.8 9E-21 1.9E-25 151.0 11.6 102 99-239 5-106 (106)
18 cd03393 PAP2_like_3 PAP2_like_ 99.8 4.2E-20 9.1E-25 151.4 14.2 109 100-238 16-124 (125)
19 PRK09597 lipid A 1-phosphatase 99.8 4.4E-19 9.6E-24 153.0 19.9 128 77-242 61-188 (190)
20 PRK11837 undecaprenyl pyrophos 99.8 1.3E-19 2.7E-24 160.3 16.7 112 96-239 58-169 (202)
21 smart00014 acidPPc Acid phosph 99.8 6.1E-19 1.3E-23 142.3 12.0 111 105-237 3-114 (116)
22 PLN02525 phosphatidic acid pho 99.8 3.2E-18 6.8E-23 162.2 18.0 121 102-238 40-160 (352)
23 cd03381 PAP2_glucose_6_phospha 99.8 3.6E-18 7.8E-23 153.6 15.0 133 102-240 20-152 (235)
24 PF01569 PAP2: PAP2 superfamil 99.8 4.4E-19 9.6E-24 144.7 3.7 124 99-243 2-125 (129)
25 cd01610 PAP2_like PAP2_like pr 99.7 2.3E-16 5.1E-21 126.5 13.6 113 103-238 9-121 (122)
26 COG0671 PgpB Membrane-associat 99.7 7.3E-15 1.6E-19 129.0 20.9 120 99-245 93-214 (232)
27 cd03397 PAP2_acid_phosphatase 99.7 1.1E-15 2.4E-20 138.0 13.4 100 111-238 115-214 (232)
28 cd03380 PAP2_like_1 PAP2_like_ 99.6 1.6E-15 3.5E-20 134.9 12.5 112 99-237 95-206 (209)
29 KOG4268 Uncharacterized conser 99.6 8.5E-15 1.8E-19 120.6 10.4 117 97-242 64-180 (189)
30 KOG3146 Dolichyl pyrophosphate 99.5 5.7E-13 1.2E-17 115.1 16.5 145 69-242 29-176 (228)
31 cd03398 PAP2_haloperoxidase PA 99.5 3.7E-13 8.1E-18 121.6 12.5 135 98-238 87-230 (232)
32 cd03386 PAP2_Aur1_like PAP2_li 99.4 1.9E-11 4.1E-16 106.9 16.5 74 153-240 111-184 (186)
33 COG3907 PAP2 (acid phosphatase 99.3 2E-10 4.3E-15 98.7 15.2 177 55-246 61-241 (249)
34 KOG2822 Sphingoid base-phospha 99.3 3.1E-11 6.7E-16 112.7 10.5 130 106-255 120-251 (407)
35 PF14378 PAP2_3: PAP2 superfam 98.5 4.3E-06 9.3E-11 73.2 13.7 68 155-235 122-189 (191)
36 COG1963 Uncharacterized protei 97.5 0.0034 7.4E-08 51.7 12.3 25 218-242 127-151 (153)
37 PF02681 DUF212: Divergent PAP 97.1 0.0047 1E-07 51.3 9.3 18 218-235 124-141 (141)
38 PF14360 PAP2_C: PAP2 superfam 96.9 0.0049 1.1E-07 45.6 6.8 64 161-235 6-69 (74)
39 KOG3058 Uncharacterized conser 92.7 2.8 6E-05 40.0 12.8 139 80-244 128-282 (351)
40 PF05297 Herpes_LMP1: Herpesvi 86.5 0.21 4.5E-06 46.0 0.0 51 192-242 135-185 (381)
41 PF10261 Scs3p: Inositol phosp 75.6 9.1 0.0002 34.7 6.6 35 203-239 204-238 (238)
42 PRK02983 lysS lysyl-tRNA synth 63.2 2.5E+02 0.0055 31.4 16.9 24 99-122 77-100 (1094)
43 PF04238 DUF420: Protein of un 61.9 89 0.0019 25.7 9.9 49 78-126 16-64 (133)
44 PF09586 YfhO: Bacterial membr 57.8 2.6E+02 0.0057 29.8 15.1 9 112-120 320-328 (843)
45 PF10337 DUF2422: Protein of u 51.7 1.3E+02 0.0028 29.8 10.1 24 223-246 193-216 (459)
46 PF12794 MscS_TM: Mechanosensi 50.2 2.3E+02 0.0051 27.0 12.3 14 253-266 256-269 (340)
47 PF12273 RCR: Chitin synthesis 48.7 16 0.00034 29.8 2.6 9 68-76 2-10 (130)
48 PRK10726 hypothetical protein; 42.7 1.7E+02 0.0036 23.0 8.8 80 153-238 14-99 (105)
49 PF12084 DUF3561: Protein of u 41.6 1.7E+02 0.0038 23.0 8.1 85 153-238 17-102 (107)
50 PF06295 DUF1043: Protein of u 35.7 37 0.0008 27.7 2.8 23 224-246 2-24 (128)
51 KOG3750 Inositol phospholipid 33.5 1.3E+02 0.0027 27.8 6.1 29 216-244 219-247 (270)
52 TIGR02916 PEP_his_kin putative 31.0 3E+02 0.0065 28.6 9.4 91 164-257 2-92 (679)
53 PF13373 DUF2407_C: DUF2407 C- 31.0 60 0.0013 27.0 3.4 24 217-240 85-108 (140)
54 PF07415 Herpes_LMP2: Gammaher 29.5 18 0.0004 34.5 0.1 32 279-312 72-103 (489)
55 PRK06080 1,4-dihydroxy-2-napht 29.5 4.5E+02 0.0097 24.1 15.5 34 208-241 126-161 (293)
56 PLN02248 cellulose synthase-li 29.2 8.7E+02 0.019 27.3 12.8 39 201-239 1045-1084(1135)
57 PF14316 DUF4381: Domain of un 27.1 3.1E+02 0.0066 22.5 7.1 32 94-125 49-86 (146)
58 PRK12438 hypothetical protein; 25.5 4.2E+02 0.0091 29.3 9.3 25 15-39 206-231 (991)
59 TIGR02230 ATPase_gene1 F0F1-AT 25.4 3.3E+02 0.0072 21.3 6.6 37 201-240 54-93 (100)
60 PF03699 UPF0182: Uncharacteri 24.7 5E+02 0.011 28.0 9.5 25 15-39 196-221 (774)
61 COG4042 Predicted membrane pro 22.3 3.1E+02 0.0067 21.0 5.4 41 207-247 60-102 (104)
62 PF11190 DUF2976: Protein of u 22.2 3.6E+02 0.0078 20.5 5.9 44 199-242 38-81 (87)
63 COG4980 GvpP Gas vesicle prote 22.1 99 0.0021 24.8 3.0 23 222-244 5-27 (115)
64 COG4129 Predicted membrane pro 22.0 1.5E+02 0.0032 28.4 4.7 28 215-242 51-78 (332)
65 PF04632 FUSC: Fusaric acid re 21.4 2.2E+02 0.0047 29.3 6.2 38 211-248 379-416 (650)
66 PF08019 DUF1705: Domain of un 21.3 4.5E+02 0.0098 21.8 7.1 12 76-87 77-88 (156)
67 PRK11560 phosphoethanolamine t 21.1 2.6E+02 0.0056 28.8 6.5 18 38-55 89-106 (558)
68 COG5336 Uncharacterized protei 21.1 1.1E+02 0.0024 24.4 3.0 40 201-240 54-93 (116)
No 1
>PLN02731 Putative lipid phosphate phosphatase
Probab=100.00 E-value=2.5e-62 Score=456.07 Aligned_cols=311 Identities=68% Similarity=1.282 Sum_probs=279.8
Q ss_pred CCCCCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCccCCCCCCCcCCCcchhHHHHHHHHHHHH
Q 021062 1 MDVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVI 80 (318)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~dwi~l~~l~~~~~~~~~i~p~~~f~~~~~~~~~~~p~~~~tv~~~~~~~~~i~lp~~ 80 (318)
+|+|+|+||+|+|+.++++.|+.||+++++++++..++..++||+|+++++++++++||+++++||.+.+.++++++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~Dwii~~~l~~~~~i~~~~~Pf~r~f~~~~~~~isyP~~~etVp~~~l~ii~~liPi~ 100 (333)
T PLN02731 21 REAQLGGHTLRSHGMTVARTHMHDWIILVLLVILECVLLIIHPFYRFVGKDMMTDLSYPLKSNTVPIWSVPVYAMLLPLV 100 (333)
T ss_pred hhcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcccccccCCCCCCcccHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCC
Q 021062 81 IFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKS 160 (318)
Q Consensus 81 i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~S 160 (318)
+++++++++++.++++..+++++++++++.++++++|..+|||||+++++|+|++...++...+..|++++...+++.+|
T Consensus 101 iii~~~~~~r~~~~l~~~ilgll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~S 180 (333)
T PLN02731 101 IFIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKS 180 (333)
T ss_pred heeeeeeehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCC
Confidence 99888888888888888899999999999999999999999999999999999988777767788999988888999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHH
Q 021062 161 FPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYL 240 (318)
Q Consensus 161 FPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~ 240 (318)
|||||++.++++++++++++.++++.++++++.+|.++.+++++++++||+||+++++|||+||++|+++|+++++++|+
T Consensus 181 FPSGHSS~sfagl~fLslyL~~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~ 260 (333)
T PLN02731 181 FPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYL 260 (333)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888777788889888899999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcchhhhhhhcccc-cCCCCCCCCCCcCCcccccccccccCCCCCccccccC-CCCCchhhhhhhhcC
Q 021062 241 QFFPPPYHAEGWGPYAYFRFLRECES-IQEGSPVNPHTAQTMLSEVVNEQHERNNNGFLGLQSV-SDSNSLVNDVETARR 318 (318)
Q Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 318 (318)
++||++++.+.|+|+++++++++.+. .++.+. .+++..+..+.+. .+||+||++.+ .+.....||.|+||+
T Consensus 261 ~yfp~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (333)
T PLN02731 261 QFFPPPYHTEGWGPYAYFQVLEAARVQGAANGA-----VQQPPPQVNNGEE--EDGGFMGLHLVDNPTMRREEDVETGRG 333 (333)
T ss_pred HHcCCccccCCCCChHHHHHhhccccCCcCccc-----ccCCCcccccccc--cCCceeEeeecCCCcccchhhhhccCC
Confidence 99999999999999999999999876 332222 2334445555553 34999999998 555567999999997
No 2
>PLN02250 lipid phosphate phosphatase
Probab=100.00 E-value=7.6e-60 Score=438.28 Aligned_cols=285 Identities=68% Similarity=1.295 Sum_probs=259.9
Q ss_pred CCCCCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCccCCCCCCCcCCCcchhHHHHHHHHHHHH
Q 021062 1 MDVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVI 80 (318)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~dwi~l~~l~~~~~~~~~i~p~~~f~~~~~~~~~~~p~~~~tv~~~~~~~~~i~lp~~ 80 (318)
||+|+|+||+++|+.+++++|+.||+++++++++.+++..++||+|++.++++++++||+++++||.+++.++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~Dwii~i~l~~i~~i~~~i~Pf~r~~~~~~~~~i~yP~~~~tVp~~~l~ii~~~iP~~ 81 (314)
T PLN02250 2 PEIQLGAHTIRSHGVKVARTHMHDWLILLLLVVIEVVLNVIEPFHRFVGKDMLTDLSYPLQDNTIPFWAVPLIAILLPFA 81 (314)
T ss_pred CcccccccchhccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcchhhccCCCCCCeecHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccc-cceeecCCcccccCCCC
Q 021062 81 IFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQF-NNVICHGDKHVVNEGHK 159 (318)
Q Consensus 81 i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~-~~~~c~~~~~~~~~~~~ 159 (318)
+++++++.+++.+++++.+++++++++++.++++++|..+|||||+|+++|+|++...++.. .+..|++++...+++++
T Consensus 82 vilv~~~~r~~~~~l~~~~l~ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~ 161 (314)
T PLN02250 82 VILVYYFIRRDVYDLHHAILGLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHK 161 (314)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCC
Confidence 99999998888889999999999999999999999999999999999999999987666555 66789988888899999
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHH
Q 021062 160 SFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 160 SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~ 239 (318)
||||||++.++++++++++|+..+++.++++++.+|.++.+++++++++||+||+++++|||+||++|+++|+++++++|
T Consensus 162 SFPSGHSS~afa~~~fLslyL~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y 241 (314)
T PLN02250 162 SFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCY 241 (314)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777778888998889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCcchhhhhhhcccc-cCCCCCCCCCCcCCccccc
Q 021062 240 LQFFPPPYHAEGWGPYAYFRFLRECES-IQEGSPVNPHTAQTMLSEV 285 (318)
Q Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 285 (318)
+++||+++++++|+|++++..++|.+. .|+.+..|....++.+.+.
T Consensus 242 ~~~fp~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (314)
T PLN02250 242 LQFFPPPYDIDGWGPHAYFQMLAESRNGAQSSNGINHLSVQQTELES 288 (314)
T ss_pred HHHcCCcccCCCCCcchhHHHhhccccccccccccccccccccccCC
Confidence 999999999999999999999999887 4444444444444444443
No 3
>PLN02715 lipid phosphate phosphatase
Probab=100.00 E-value=2.2e-58 Score=429.72 Aligned_cols=266 Identities=69% Similarity=1.327 Sum_probs=248.9
Q ss_pred CCCCCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCccCCCCCCCcCCCcchhHHHHHHHHHHHH
Q 021062 1 MDVQFGSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPFYRFVGKDMMTDLKYPFKNNTVPVWAVPVYAVLVPVI 80 (318)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~dwi~l~~l~~~~~~~~~i~p~~~f~~~~~~~~~~~p~~~~tv~~~~~~~~~i~lp~~ 80 (318)
+|+|+|+||++||+.+++++|+.||+++++++++..++..++||+|++..+++++++||+++++||.+++.++++++|++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~Dwi~~~~l~~i~~~~~~~~Pf~R~~~~~~~~~i~yP~~~~tVp~~~l~vi~~liPii 106 (327)
T PLN02715 27 QEIDLGVHTIKSHGGRVASKHKHDWIILVILIAIEIGLNLISPFYRYVGKDMMTDLKYPFKDNTVPIWSVPVYAVLLPII 106 (327)
T ss_pred chhhhcchhHhhcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCcccchhccCCCCCCcccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999998888877889999999999999999999999999
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCC
Q 021062 81 IFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKS 160 (318)
Q Consensus 81 i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~S 160 (318)
+++..++++++.+++++.++.++++++++.++++++|..+|||||+|+++|+|++...++...+.+|++++...+++.+|
T Consensus 107 ~i~~~~~~r~~~~~~~~~~l~l~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~S 186 (327)
T PLN02715 107 LFVCFYLKRRCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKS 186 (327)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCC
Confidence 88888888888888888899999999999999999999999999999999999988777666678999988888999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHH
Q 021062 161 FPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYL 240 (318)
Q Consensus 161 FPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~ 240 (318)
|||||++.++++++++++++..+++.++++++.+|.++.+++++++++||+||+++++||++||++|+++|+++++++|+
T Consensus 187 FPSGHSS~sfagl~~Lsl~L~~kl~~~~~~~~~~k~~l~~lpll~A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~ 266 (327)
T PLN02715 187 FPSGHTSWSFAGLTFLSLYLSGKIKAFNGEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYR 266 (327)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988887788889988899999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcchhhhhhhcccc
Q 021062 241 QFFPPPYHAEGWGPYAYFRFLRECES 266 (318)
Q Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~ 266 (318)
.+||.+.+.++|+|+.+++++.+.+.
T Consensus 267 ~~fp~~~~~~~~~p~~~~~~~~~~~~ 292 (327)
T PLN02715 267 QFYPNPYHEEGWGPYAYFKAAQERGV 292 (327)
T ss_pred HHcCCccccCCCCCcchHHHhhhccC
Confidence 99999999999999999997776643
No 4
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=100.00 E-value=5.2e-46 Score=344.99 Aligned_cols=256 Identities=40% Similarity=0.697 Sum_probs=230.4
Q ss_pred CcccccccchhhhhhhHHHHHHHHHHHHHHHHHhccCcc-cc-cccCCccCCCCCCCcCC-CcchhHHHHHHHHHHHHHH
Q 021062 6 GSHTLRSHGVVVARKHMHDWLIFLFLVVMDIILNAIDPF-YR-FVGKDMMTDLKYPFKNN-TVPVWAVPVYAVLVPVIIF 82 (318)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~dwi~l~~l~~~~~~~~~i~p~-~~-f~~~~~~~~~~~p~~~~-tv~~~~~~~~~i~lp~~i~ 82 (318)
+.|.+++++.++.+....||++++++.+..+.+....++ +| |+|.| .+++||++++ +|+.+++.++++++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~d~~il~~l~~~~~~l~~~~~~~~rgF~c~D--~si~~Py~~~etI~~~~L~~i~~~~P~~vI 79 (317)
T KOG3030|consen 2 GNRMIKRSNSRRPCRVLVDLLILALLVLLFYVLELTDPFYRRGFFCDD--ESISYPYRENETIPPLLLLAIAVLLPLLVI 79 (317)
T ss_pred CCcccCCccchhhHHHHHHHHHHHHHHHHHHHHHhcccceeeeeecCC--hhhcCcCCCCCccCHHHHHHHHHHhhHHHH
Confidence 568899999999999999999999999988888776666 45 99988 7999999995 9999999999999999999
Q ss_pred HHHHHHhh----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccc------
Q 021062 83 LIVYYHRR----------------DVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYD------ 140 (318)
Q Consensus 83 ~~~~~~r~----------------~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~------ 140 (318)
++....+. ..+++.+.++.++++++++.++++++|..+||+||+|+++|+|+......
T Consensus 80 ~v~e~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~ 159 (317)
T KOG3030|consen 80 LVVEFIRACLKSKSTESNICCLNPDVRRLYRFVGVFLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNL 159 (317)
T ss_pred HHHHHHHHHhhccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCccccc
Confidence 98877664 56778888999999999999999999999999999999999999875321
Q ss_pred cccceeecC-CcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 021062 141 QFNNVICHG-DKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWH 219 (318)
Q Consensus 141 ~~~~~~c~~-~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H 219 (318)
.+.++.|+| ++..++|+++|||||||+++++.++|+++|+.++..++. +++++|.++.++++++|++||+|||.+++|
T Consensus 160 yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s~y~~~flalyl~~~~~~~~-~~rllr~~l~f~~l~~A~~v~lSRV~DYkH 238 (317)
T KOG3030|consen 160 YIEDFICTGPDPDVVREGRKSFPSGHSSFSFYAMGFLALYLQARLFWFG-RGRLLRPLLQFLPLMLALLVGLSRVSDYKH 238 (317)
T ss_pred ccccceeCCCCHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHeeehhccccc
Confidence 236889999 889999999999999999999999999999999988754 688999999999999999999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhcc
Q 021062 220 HWQDVFAGGLLGLVVATFCYLQFFPPPYHAEGWGPYAYFRFLREC 264 (318)
Q Consensus 220 ~~sDVlaG~liG~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 264 (318)
||+||++|+++|.++|++++..+++...+.+.+.|...++..++.
T Consensus 239 HwsDV~aG~liG~~~A~~~~~~v~~~f~~~~~~~~~~~~~~~~~~ 283 (317)
T KOG3030|consen 239 HWSDVLAGALIGAFVAYFLYRYVFPNFKDPTSEKPPASLPSRRKL 283 (317)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhcchhhcccccCCCccccccccc
Confidence 999999999999999999999999999998888888776654443
No 5
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=100.00 E-value=5.1e-34 Score=250.80 Aligned_cols=189 Identities=49% Similarity=0.950 Sum_probs=157.9
Q ss_pred CCCCCCCcCC-CcchhHHHHHHHHHHHHHHHHHHHH-hhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccccc
Q 021062 54 TDLKYPFKNN-TVPVWAVPVYAVLVPVIIFLIVYYH-RRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRC 131 (318)
Q Consensus 54 ~~~~~p~~~~-tv~~~~~~~~~i~lp~~i~~~~~~~-r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c 131 (318)
++++||++++ ++|.+++.++.+.+|+.++++.++. +++.++....++.++++++++.++++++|..+||+||+++..|
T Consensus 1 ~~~~~p~~~~~~i~~~~l~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~ 80 (193)
T cd03390 1 PSISYPFAESETVPTWLLVIISVGIPLLVIILISLFFRRSLWDLHTSLLGLLLSVSLNGVITNVLKNYAGRPRPDFLARC 80 (193)
T ss_pred CCcCCCCCCCcEEcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHh
Confidence 4789999985 9999999999999999998887775 5666777777888889999999999999999999999999999
Q ss_pred CCCCCcccccc-cceeec-CCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHH
Q 021062 132 FPDGIAVYDQF-NNVICH-GDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLV 209 (318)
Q Consensus 132 ~p~~~~~~~~~-~~~~c~-~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv 209 (318)
+|+.....+.. ....|. ++....+++++|||||||+.++++++++++++..+.+.++++++.++..+.++++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 160 (193)
T cd03390 81 FPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFLSLYLAGKLHIFDPRGSSWRLLLALLPLLLAILV 160 (193)
T ss_pred CCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHH
Confidence 98764332221 113454 4555567788999999999999999999998888776655556677777778888999999
Q ss_pred HHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 210 GISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 210 ~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
|+||||+|+|||+||++|+++|.++++++|+++
T Consensus 161 ~~SRi~~g~H~~sDVlaG~~lG~~~a~~~~~~~ 193 (193)
T cd03390 161 AVSRTRDYRHHFSDVIAGSLIGLIIAYLSYRQY 193 (193)
T ss_pred HHHHHhccccCHHHHHHHHHHHHHHHHheeEeC
Confidence 999999999999999999999999999988753
No 6
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.95 E-value=4.4e-28 Score=204.76 Aligned_cols=137 Identities=40% Similarity=0.681 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccc------cceeecCCcccccCCCCCCCCchHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQF------NNVICHGDKHVVNEGHKSFPSGHTSWSFAG 172 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~------~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~ 172 (318)
+..++++++++.++++++|..+|||||+++++|+|+....-... .+..|+++++..+++++||||||++.+++.
T Consensus 6 ~~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~ 85 (150)
T cd03384 6 VGVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYA 85 (150)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHH
Confidence 45578889999999999999999999999999999875431111 233456677888999999999999999999
Q ss_pred HHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHH
Q 021062 173 LGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (318)
Q Consensus 173 ~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~ 237 (318)
++++.+++..+.+. ++.+.++.++.++++++++++++||||+|+||++||++|+++|.+++++
T Consensus 86 ~~~l~l~l~~~~~~--~~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~ 148 (150)
T cd03384 86 AVFLALYLQARLKL--RGSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALF 148 (150)
T ss_pred HHHHHHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 99999888877653 2445567777888899999999999999999999999999999999875
No 7
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.89 E-value=1.8e-22 Score=181.69 Aligned_cols=147 Identities=21% Similarity=0.147 Sum_probs=96.6
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCC--Cc-ccccc-------------cceeecC
Q 021062 86 YYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDG--IA-VYDQF-------------NNVICHG 149 (318)
Q Consensus 86 ~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~--~~-~~~~~-------------~~~~c~~ 149 (318)
+..|.+.+.....++.+.++++++..+++++|..+.||||+..+.-+-.. .+ .|... .+..+..
T Consensus 66 ~~~r~~~k~~l~l~~~l~~~i~~~~~~k~~iK~~~~epRP~v~~l~~~~~~~~~~FY~l~~~~r~~~v~~~~~~~~~~~~ 145 (244)
T PRK10699 66 WCLRFRLKAALVLFAILAAAILVGQGVKSWIKERVQEPRPFVVWLEKTHHIPVDEFYTLKRAERGELVKEQLAEQSNIPQ 145 (244)
T ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHhcCCCHHHHHccCHHHHHHHHHHHHhccccCCH
Confidence 44444444444445566788888999999999999999997433322111 11 11100 0001110
Q ss_pred --CcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHH
Q 021062 150 --DKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAG 227 (318)
Q Consensus 150 --~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG 227 (318)
.++...++++|||||||+.+++.+.+...++..+ .+.....+.+++++++++||||+|+|||+||++|
T Consensus 146 w~~~hw~~~~gySFPSGHa~~a~~~~l~~~~ll~~~----------~~~~~~~~~~~wa~~v~~SRvyLGvH~psDVlaG 215 (244)
T PRK10699 146 WLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPR----------RRYKTVALLMLWATGVMGSRLLLGMHWPRDLVVA 215 (244)
T ss_pred HHHhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHccCcCHHHHHHH
Confidence 2355678999999999999887555443333221 1112234456789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 021062 228 GLLGLVVATFCYLQF 242 (318)
Q Consensus 228 ~liG~~~a~~~~~~~ 242 (318)
+++|.+++.++++++
T Consensus 216 ~llG~~~~~l~~~l~ 230 (244)
T PRK10699 216 TLISWLLVTVATWLA 230 (244)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988877665
No 8
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.89 E-value=8e-22 Score=173.89 Aligned_cols=134 Identities=25% Similarity=0.260 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHH
Q 021062 93 YDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAG 172 (318)
Q Consensus 93 ~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~ 172 (318)
++.+...+.++.+++++.+++.++|..++|+||+....|+.+.. +.+.. .......+.++|||||||+.+++.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~v~~~lK~~~~r~RP~~~~~~gg~~~--~~~~~-----~~~~~~~~~~~SFPSGHas~af~~ 135 (197)
T cd03396 63 RRRRRALLLLILVIGLGLLVVAILKSHWGRPRPWDLTEFGGDAP--YTPLF-----SGPSNGCGKGCSFPSGHASAGFAL 135 (197)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHhCCCCC--CCccc-----ccCCCCCCCCCcCCchhHHHHHHH
Confidence 34444566678888888899999999999999997766543221 11100 001123468899999999999987
Q ss_pred HHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHh
Q 021062 173 LGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (318)
Q Consensus 173 ~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~ 241 (318)
+.+..++. ++ +.+ ++.....+.+++++++|+|||+.|+||+|||++|+++|++++.++|+.
T Consensus 136 ~~~~~~~~-~~------~~~-~~~~~~~~~~~~~~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~~ 196 (197)
T cd03396 136 LALYFLFR-RR------RPR-LARLVLAAGLALGALMGLARMARGAHFLSDVLWSLLLVWLIALLLYRL 196 (197)
T ss_pred HHHHHHHH-Hh------cch-HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 65443322 21 111 344445566778999999999999999999999999999999998875
No 9
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.87 E-value=2.9e-21 Score=168.08 Aligned_cols=116 Identities=34% Similarity=0.482 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~ 178 (318)
...++.+++.+.+++..+|..++||||+....+ .+.++||||||++.+++++.++.+
T Consensus 64 ~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~-----------------------~~~~~sfPSgHa~~~~~~~~~l~~ 120 (182)
T cd03392 64 ALFLLLALLGGGALNTLLKLLVQRPRPPLHLLV-----------------------PEGGYSFPSGHAMGATVLYGFLAY 120 (182)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccC-----------------------CCCCCCCCcHHHHHHHHHHHHHHH
Confidence 444566777888899999999999999743111 356799999999999999888877
Q ss_pred HHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
++.++.+ .+..|..+.++.+++++++++||+|+|+||++||++|+++|.+++.+++..+
T Consensus 121 ~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~sRv~lg~H~~sDvl~G~~lG~~~~~~~~~~~ 179 (182)
T cd03392 121 LLARRLP-----RRRVRILLLILAAILILLVGLSRLYLGVHYPSDVLAGWLLGLAWLALLILLY 179 (182)
T ss_pred HHHHHcc-----hhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Confidence 7665433 1234555555667889999999999999999999999999999999888765
No 10
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.87 E-value=3.9e-21 Score=163.93 Aligned_cols=116 Identities=23% Similarity=0.303 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~ 178 (318)
.+.++.+++++..++.++|..++||||+.... ..+.++||||||++.+++.+.++.+
T Consensus 44 ~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~-----------------------~~~~~~SFPSgHa~~~~~~~~~~~l 100 (159)
T cd03382 44 AIYLFIGLLANEALNYVLKRIIKEPRPCSGAY-----------------------FVRSGYGMPSSHSQFMGFFAVYLLL 100 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCc-----------------------CCCCCCCCCchhHHHHHHHHHHHHH
Confidence 34456667778888999999999999973211 1346799999999988877666665
Q ss_pred HHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHH
Q 021062 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~ 239 (318)
++..+.+.. .++..+....++.+++++++++||+|+|+|||+||++|+++|.+++.+++
T Consensus 101 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~~~~~~ 159 (159)
T cd03382 101 FIYLRLGRL--NSLVSRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILLGILWF 159 (159)
T ss_pred HHHHHcccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 443322210 01234555566677889999999999999999999999999999988764
No 11
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.87 E-value=4.7e-21 Score=167.53 Aligned_cols=117 Identities=33% Similarity=0.427 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHH
Q 021062 98 AILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLS 177 (318)
Q Consensus 98 ~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~ 177 (318)
..+.++.+++.+.+++..+|..++||||+....+.. ..+ +....++.++|||||||+.+++.+.+++
T Consensus 70 ~~~~l~~~~~~~~~i~~~lK~~~~R~RP~~~~~~~~---~~~----------~~~~~~~~~~SFPSGHa~~a~~~~~~l~ 136 (186)
T cd03389 70 AGLFLFATVALSGILVNLLKFIIGRARPKLLFDDGL---YGF----------DPFHADYAFTSFPSGHSATAGAAAAALA 136 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCChhhcCCc---ccc----------cccccCCCCCCcCcHHHHHHHHHHHHHH
Confidence 344456667777888999999999999985422211 000 0112246789999999999999888877
Q ss_pred HHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 178 LYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 178 ~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
++..+ .+ ...+.+++++|+||+|+|+||++||++|+++|++++.+.|+.+
T Consensus 137 ~~~~~-----------~~----~~~~~~~~lv~~SRiylg~H~~sDVl~G~~lG~~~~~~~~~~~ 186 (186)
T cd03389 137 LLFPR-----------YR----WAFILLALLIAFSRVIVGAHYPSDVIAGSLLGAVTALALYQRF 186 (186)
T ss_pred HHHHH-----------HH----HHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 65421 11 1234577899999999999999999999999999998888753
No 12
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.86 E-value=7.9e-21 Score=159.42 Aligned_cols=109 Identities=24% Similarity=0.215 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~ 178 (318)
.+....+++++.+++..+|..++||||+... ++. ....++.++||||||++.+++.+..+..
T Consensus 35 ~~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~---~~~---------------~~~~~~~~~SFPSgH~~~~~~~~~~l~~ 96 (144)
T cd03385 35 VLFATIAVAVALLINYIIGLLYFHPRPFVVG---LGH---------------NLLPHAADSSFPSDHTTLFFSIAFSLLL 96 (144)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCccc---ccc---------------ccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 4455677778888999999999999996221 000 0012356799999999999876654322
Q ss_pred HHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHH
Q 021062 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~ 239 (318)
.. ++. ...+.+.+++++++||+|.|+|||+||++|+++|.+++.++|
T Consensus 97 --~~--------~~~----~~~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~~ 143 (144)
T cd03385 97 --RR--------RKW----AGWILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLVF 143 (144)
T ss_pred --Hh--------hHH----HHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHh
Confidence 11 111 123456788999999999999999999999999999998775
No 13
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.86 E-value=6.8e-21 Score=162.38 Aligned_cols=112 Identities=35% Similarity=0.423 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHH
Q 021062 96 HHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGF 175 (318)
Q Consensus 96 ~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~ 175 (318)
+..++.++.+++++.+++.++|..++|+||+.. .|+. .......++||||||++.+++++.+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~---~~~~---------------~~~~~~~~~SFPSGHa~~a~a~a~~ 107 (159)
T cd03391 46 QEVLVNLLLGLLLDIITVAILKALVRRRRPAYN---SPDM---------------LDYVAVDKYSFPSGHASRAAFVARF 107 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC---CCcc---------------chhccCCCCCCCchhHHHHHHHHHH
Confidence 334566677788888889999999999999743 1110 0112345789999999999998887
Q ss_pred HHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHH
Q 021062 176 LSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (318)
Q Consensus 176 l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~ 237 (318)
+.++...+ .....+.+.+++++++||||+|+|||+||++|+++|.+++.+
T Consensus 108 l~~~~~~~------------~~~~~~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~~~~ 157 (159)
T cd03391 108 LLNHLVLA------------VPLRVLLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLEALL 157 (159)
T ss_pred HHHHHHHH------------HHHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHh
Confidence 76543211 112334567899999999999999999999999999998764
No 14
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.86 E-value=3.6e-21 Score=153.53 Aligned_cols=96 Identities=26% Similarity=0.401 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021062 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (318)
Q Consensus 102 l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~ 181 (318)
.+.+++++.+++.++|..++|+||+ ..|||||||+.+++++.++.+...
T Consensus 13 ~~~~~~~~~~i~~~lK~~~~r~RP~-------------------------------~~sFPSgHt~~a~a~a~~l~~~~~ 61 (109)
T cd03383 13 TFVSLLIVIIVVVILKAYFGRGTPL-------------------------------EGGMPSGHAAIAFSIATAISLITN 61 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC-------------------------------CCCCChHHHHHHHHHHHHHHHHHh
Confidence 3456677888999999999999996 148999999999998877664321
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHh
Q 021062 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (318)
Q Consensus 182 ~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~ 241 (318)
+.....+.+.++.++++||+|+|.||++||++|+++|.+++.++|++
T Consensus 62 -------------~~~~~~~~~~~a~lv~~SRvylg~H~psDVlaG~~lG~~~~~~~~~~ 108 (109)
T cd03383 62 -------------NPIISILSVLLAVMVAHSRVEMKIHTMWEVVVGAILGALITLLIFKI 108 (109)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11223455678899999999999999999999999999999888765
No 15
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.86 E-value=1.3e-20 Score=163.35 Aligned_cols=112 Identities=32% Similarity=0.347 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 021062 103 LYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISG 182 (318)
Q Consensus 103 ~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~ 182 (318)
+...+.+.+++..+|..++||||+.... .... . ....++.++|||||||+.+++++.++.+++.+
T Consensus 63 ~~~~~~~~~~~~~lK~~~~r~RP~~~~~----~~~~-~----------~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~ 127 (177)
T cd03395 63 LAVGFADQLASGFLKPLVARLRPCNALD----GVRL-V----------VLGDQGGSYSFASSHAANSFALALFIWLFFRR 127 (177)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCcc----cccc-c----------cccCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3344556678889999999999973210 0000 0 01124578999999999999988877654422
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 183 KIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 183 ~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
+ ....+.++++++||+||+|.|+|||+||++|+++|..++.+.+..+
T Consensus 128 ~-------------~~~~~~~~~~~~v~~SRvylG~H~psDVl~G~~lG~~~~~~~~~~~ 174 (177)
T cd03395 128 G-------------LFSPVLLLWALLVGYSRVYVGVHYPGDVIAGALIGIISGLLFYLLF 174 (177)
T ss_pred H-------------HHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1123446678999999999999999999999999999998877655
No 16
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.85 E-value=1.9e-20 Score=158.32 Aligned_cols=112 Identities=25% Similarity=0.281 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021062 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (318)
Q Consensus 102 l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~ 181 (318)
++.+++++..++..+|..++||||+.. |..... ...+..++||||||++.+++++.++.+++.
T Consensus 38 ~~~~~~~~~~~~~~lK~~~~r~RP~~~----~~~~~~-------------~~~~~~~~SFPSgH~~~a~~~~~~l~~~~~ 100 (151)
T cd03388 38 LVVVLALGMYIGQFIKDLFCLPRPSSP----PVVRLT-------------MSSAALEYGFPSTHAMNATAISFYLLIYLY 100 (151)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCC----chhhhh-------------ccccCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 445566677888999999999999731 100000 000357899999999999999888876654
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHH
Q 021062 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (318)
Q Consensus 182 ~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~ 237 (318)
++.+. .+....+...++++++++||+|+|+|||+||++|+++|.+++.+
T Consensus 101 ~~~~~-------~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~ 149 (151)
T cd03388 101 DRYQY-------PFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLF 149 (151)
T ss_pred Hhccc-------hHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 43221 23333445567889999999999999999999999999988754
No 17
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.85 E-value=9e-21 Score=150.95 Aligned_cols=102 Identities=38% Similarity=0.525 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~ 178 (318)
.+.++.+++++.+++..+|..++|+||+.. .+.++||||||++.+++++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~--------------------------~~~~~sfPSgHa~~a~~~~~~~~~ 58 (106)
T cd03394 5 LLILAEAAALTAAVTEGLKFAVGRARPDGS--------------------------NNGYRSFPSGHTASAFAAATFLQY 58 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--------------------------CCCCCccCcHHHHHHHHHHHHHHH
Confidence 556778888899999999999999999732 146799999999999988776654
Q ss_pred HHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHH
Q 021062 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~ 239 (318)
.... + ......+.++.++++||+|+|+||++||++|+++|.+++.+.|
T Consensus 59 ~~~~---------~----~~~~~~~~~~~~v~~sRv~~g~H~~sDV~~G~~lG~~~~~~~~ 106 (106)
T cd03394 59 RYGW---------R----WYGIPAYALASLVGASRVVANRHWLSDVLAGAAIGILVGYLVT 106 (106)
T ss_pred HHcc---------h----HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHheeeeC
Confidence 3211 1 1123345678899999999999999999999999999886543
No 18
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.84 E-value=4.2e-20 Score=151.37 Aligned_cols=109 Identities=27% Similarity=0.281 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHH
Q 021062 100 LGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLY 179 (318)
Q Consensus 100 l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~ 179 (318)
..++.+++++.+++..+|..++||||+......+ .....+.++||||||++.+++++..+...
T Consensus 16 ~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~-----------------~~~~~~~~~sFPSgHa~~~~~~~~~~~~~ 78 (125)
T cd03393 16 RYLGLALCASGYLNAALKEVFKIPRPFTYDGIQA-----------------IYEESAGGYGFPSGHAQTSATFWGSLMLH 78 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccch-----------------hccCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 3355677788889999999999999974321100 01124578999999999998876655433
Q ss_pred HhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHH
Q 021062 180 ISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (318)
Q Consensus 180 l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~ 238 (318)
..+ .....+.+++++++++||+|+|+||++||++|+++|.+++++.
T Consensus 79 ~~~-------------~~~~~~~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 79 VRK-------------KWFTLIGVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HHH-------------HHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 211 1122344557889999999999999999999999999998753
No 19
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.84 E-value=4.4e-19 Score=152.97 Aligned_cols=128 Identities=21% Similarity=0.211 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccC
Q 021062 77 VPVIIFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNE 156 (318)
Q Consensus 77 lp~~i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~ 156 (318)
++.+......+.+++++ ....++.+++.+.+++..+|..+.|+||... .|. ...+.
T Consensus 61 it~lg~~~~~l~~~d~~----g~~~l~~al~~~~ll~~~LK~~~~R~~~~~~---r~~-----------------~~p~~ 116 (190)
T PRK09597 61 IPTILSVAIPLIQRDAI----GLFQVANASIATTLLTHTTKRALNHVTINDQ---RLG-----------------ERPYG 116 (190)
T ss_pred HHHHHHHHHHHHhccHh----HHHHHHHHHHHHHHHHHHHHHHhcccccccc---ccc-----------------cCCCC
Confidence 33333333445555443 3667788899999999999999999887521 000 01123
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHH
Q 021062 157 GHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVAT 236 (318)
Q Consensus 157 ~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~ 236 (318)
+++|||||||+.+++.+.++.. +.+ .+... ..+.++++||+||||+|+|||+||++|+++|++++.
T Consensus 117 ~~~SFPSGHt~~af~~a~~l~~----~~~--------~~~~~--~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~ 182 (190)
T PRK09597 117 GNFNMPSGHSSMVGLAVAFLMR----RYS--------FKKYW--WLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVS 182 (190)
T ss_pred CCCCCCcHHHHHHHHHHHHHHH----HHc--------hhHHH--HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 4599999999999876544332 111 11111 123466789999999999999999999999999998
Q ss_pred HHHHhh
Q 021062 237 FCYLQF 242 (318)
Q Consensus 237 ~~~~~~ 242 (318)
+++...
T Consensus 183 lf~~~~ 188 (190)
T PRK09597 183 LFTSPK 188 (190)
T ss_pred HHHhhh
Confidence 776543
No 20
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.83 E-value=1.3e-19 Score=160.25 Aligned_cols=112 Identities=17% Similarity=0.124 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHH
Q 021062 96 HHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGF 175 (318)
Q Consensus 96 ~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~ 175 (318)
++..+.++.+++++.+++..+|..++||||+... . + .....++.++|||||||+.+++++..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~lk~~~~r~RP~~~~---~-~--------------~~~~~~~~~~SFPSgHa~~~~~~a~~ 119 (202)
T PRK11837 58 RQLVIKIAIALAISLLVSWTIGHLFPHDRPFVEG---I-G--------------YNFLHHAADDSFPSDHGTVIFTFALA 119 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc---c-c--------------cccccCCCCCCCchHHHHHHHHHHHH
Confidence 3445556777788888899999999999996210 0 0 01122356789999999988876543
Q ss_pred HHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHH
Q 021062 176 LSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 176 l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~ 239 (318)
+.+. .+ + ....+.+.+++++++||||.|+|||+||++|+++|.+++.+.-
T Consensus 120 ~l~~--~~-----------~-~~~~~~~~~a~lva~SRVylGvHypsDVlgG~~lG~~~~~~~~ 169 (202)
T PRK11837 120 FLFW--HR-----------L-WSGSLLMAIAVAIAWSRVYLGVHWPLDMLGALLVGMIGCLSAQ 169 (202)
T ss_pred HHHH--HH-----------H-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 3221 10 1 1223445678999999999999999999999999999987653
No 21
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.80 E-value=6.1e-19 Score=142.27 Aligned_cols=111 Identities=40% Similarity=0.531 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceee-cCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhc
Q 021062 105 SVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVIC-HGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGK 183 (318)
Q Consensus 105 ~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c-~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~ 183 (318)
+.+.+.+++.++|..++|+||+..... ..| ..+.....+.+.||||||++.+++++.++..++..+
T Consensus 3 ~~~~~~~~~~~lK~~~~r~RP~~~~~~-------------~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~ 69 (116)
T smart00014 3 LAVVSLLFTGVIKNYFGRPRPFFLDIG-------------DACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPAR 69 (116)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCccccc-------------ccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999864310 111 112334567899999999999999998888776654
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHH
Q 021062 184 IKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (318)
Q Consensus 184 ~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~ 237 (318)
.+ +.......+.++.++++||||+|+||++||++|+++|..++.+
T Consensus 70 ~~---------~~~~~~~~~~~~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~ 114 (116)
T smart00014 70 AA---------RKLLIILLLLLALVVGFSRVYLGAHWPSDVLAGSLLGILIAAV 114 (116)
T ss_pred hh---------hHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 32 2223455677899999999999999999999999999998754
No 22
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.79 E-value=3.2e-18 Score=162.24 Aligned_cols=121 Identities=24% Similarity=0.284 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021062 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (318)
Q Consensus 102 l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~ 181 (318)
+++.++.+..++..+|..+.||||... |. ..+.... .......++|||||||++++++++++.+++.
T Consensus 40 lv~ll~~~~~l~~~lKd~v~rPRP~~p----p~-----~ri~~~~----~~~~~a~eYsFPSgHt~nA~av~~~ll~~l~ 106 (352)
T PLN02525 40 MTLLMAFCDYVGNCIKDVVSAPRPSCP----PV-----RRVTATK----DEEENAMEYGLPSSHTLNTVCLSGYLLHYVL 106 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcCCc----ch-----hhhhccc----ccccCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 444566677888999999999999621 10 0000000 0112356799999999999999988877665
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHH
Q 021062 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (318)
Q Consensus 182 ~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~ 238 (318)
++.+. .....+.....+.+++++++++||+|+|+||++||++|+++|.+++.+.
T Consensus 107 ~~~~~---~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~ 160 (352)
T PLN02525 107 SYLQN---VDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFW 160 (352)
T ss_pred Hhccc---cchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHH
Confidence 43321 1111233333455678899999999999999999999999999888664
No 23
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.78 E-value=3.6e-18 Score=153.56 Aligned_cols=133 Identities=20% Similarity=0.153 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHh
Q 021062 102 LLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYIS 181 (318)
Q Consensus 102 l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~ 181 (318)
++...+++..++.++|.++.|+||+.... +.+. +..... ......+...+.++||||||++.+++++..+...+.
T Consensus 20 l~~~~~~~~~ln~vlK~ii~r~RP~~~~~-~~~~---~~~~~~-p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~~l~ 94 (235)
T cd03381 20 LLWVAVIGDWLNLVFKWILFGQRPYWWVH-ETDY---YSNSSV-PKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVTALL 94 (235)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCchhc-cccc---cccccc-ccccccccccCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 34444555558999999999999974211 1110 100000 000001123368899999999999988877665543
Q ss_pred hcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHH
Q 021062 182 GKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYL 240 (318)
Q Consensus 182 ~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~ 240 (318)
...+. +...+..+..+.++...+.++|++||||+|+|||+||++|+++|++++..+..
T Consensus 95 ~~~~~-r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~~ 152 (235)
T cd03381 95 SHLAG-RKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFSH 152 (235)
T ss_pred HHhhc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33221 01123345556666677888999999999999999999999999998876544
No 24
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.75 E-value=4.4e-19 Score=144.73 Aligned_cols=124 Identities=31% Similarity=0.512 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~ 178 (318)
++.++++++++..++.++|..++|+||++...+.+...... .....++||||||++.+++.+.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~-------------~~~~~~~sfPSgH~~~~~~~~~~l~~ 68 (129)
T PF01569_consen 2 LLALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHW-------------PFQSPFNSFPSGHAAIAAAFAFFLAY 68 (129)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCH-------------HCHTTS-SSS-HHHHHHHHHHHHHHH
T ss_pred ccccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCc-------------cccCCCCcCcchhhhhHHHHHhhhhh
Confidence 34567788888888999999999999987655432211100 00112689999999999998888776
Q ss_pred HHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhhc
Q 021062 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFF 243 (318)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~~ 243 (318)
+...+.+. +.......+.++.+++++|++.|.||++|+++|+++|.+++.+.++.++
T Consensus 69 ~~~~~~~~--------~~~~~~~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~~ 125 (129)
T PF01569_consen 69 YLGSRGWI--------RILLFLLAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVYK 125 (129)
T ss_dssp HCCCCHHH--------SEEHHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHCH
T ss_pred hhhccccc--------cchhhHHHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHhc
Confidence 65443221 0223445677889999999999999999999999999999998877654
No 25
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.71 E-value=2.3e-16 Score=126.52 Aligned_cols=113 Identities=46% Similarity=0.699 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhh
Q 021062 103 LYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISG 182 (318)
Q Consensus 103 ~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~ 182 (318)
...+..+..++..+|..++++||.....+.... ......+.++||||||++.+++.+.++..+...
T Consensus 9 ~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~--------------~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~ 74 (122)
T cd01610 9 LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDG--------------DPLLLTEGGYSFPSGHAAFAFALALFLALLLPR 74 (122)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCChHHhcCCcc--------------chhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 344445555789999999999998654433211 012334678999999999999988887766543
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHH
Q 021062 183 KIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (318)
Q Consensus 183 ~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~ 238 (318)
+. .+.........++.++++||++.|.||++|+++|+++|..++.+.
T Consensus 75 ~~---------~~~~~~~~~~~~~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 75 RL---------LRLLLGLLLLLLALLVGLSRVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HH---------HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 21 123344566788999999999999999999999999999988654
No 26
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.68 E-value=7.3e-15 Score=129.02 Aligned_cols=120 Identities=33% Similarity=0.418 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKI--AVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~--~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l 176 (318)
.+...............+|. .+.+|||..... ....+.++||||||++.+++.+.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~sfPSgHt~~~~~~~~~l 151 (232)
T COG0671 93 ALKLLVGLPRPLIVLSALKTWHIFARPRPGLLVA---------------------LVLGASGYSFPSGHAAGAAAAALLL 151 (232)
T ss_pred HHHHHHHhHHHHHHHHHHhccccccCCCCcchhc---------------------cccCcccCCCCChhHHHHHHHHHHH
Confidence 33445555666777788887 889999973310 1223578999999999999988888
Q ss_pred HHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhhcCC
Q 021062 177 SLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPP 245 (318)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~~~~ 245 (318)
+.+....... . .+.......+.++.++++||+|+|+||++||++|+++|.+++.+++..+.+.
T Consensus 152 ~~~~~~~~~~-----~-~~~~~~~~~~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~~ 214 (232)
T COG0671 152 ALLLPLRRAL-----L-RRVLLLILLLLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRPL 214 (232)
T ss_pred HHHHHHHHhh-----h-hHHHHHHHHHHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhcc
Confidence 7766543221 1 4455566778899999999999999999999999999999999988877543
No 27
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.66 E-value=1.1e-15 Score=138.00 Aligned_cols=100 Identities=25% Similarity=0.243 Sum_probs=72.4
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccC
Q 021062 111 VLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRR 190 (318)
Q Consensus 111 ~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~ 190 (318)
..+..+|..++|+||+... ....|..........+.||||||++.+++.+.++..++..+..
T Consensus 115 ~~~~~~K~~~~r~RP~~~~-------------~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~~~----- 176 (232)
T cd03397 115 SATYPAKKYYNRPRPFVLN-------------DEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPERAD----- 176 (232)
T ss_pred HHHHHHHhhhCCCCCCccC-------------CCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 3478999999999998431 1112221111223568999999999999988877766543211
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHH
Q 021062 191 GHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (318)
Q Consensus 191 ~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~ 238 (318)
..+.++..+|.||||.|+||++||++|.++|..+....
T Consensus 177 ----------~l~~~a~~~g~SRv~~GvH~psDV~aG~~lG~~~~a~l 214 (232)
T cd03397 177 ----------EILARGSEYGQSRIVCGVHWPSDVMGGRIMAAALVAAL 214 (232)
T ss_pred ----------HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 12346789999999999999999999999999875543
No 28
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.64 E-value=1.6e-15 Score=134.91 Aligned_cols=112 Identities=29% Similarity=0.243 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHH
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSL 178 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~ 178 (318)
...+..++.-+.+++..+|..++|+||+....... ...|. .......+.||||||++.+++.+.++..
T Consensus 95 ~~~l~~a~~da~~~~~~~K~~~~r~RP~~~~~~~~----------~~~~~--~~~~~~~~~SfPSGHa~~a~a~a~~l~~ 162 (209)
T cd03380 95 YALLARALTDAGIATWDAKYHYNRPRPFVAIRLQW----------LPICT--PEEGTPKHPSYPSGHATFGGAAALVLAE 162 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCchhhhccCC----------CcccC--CCCCCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 34445555556677899999999999985421100 00110 0112457899999999999999988887
Q ss_pred HHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHH
Q 021062 179 YISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATF 237 (318)
Q Consensus 179 ~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~ 237 (318)
++..+.. ..+.++..+|.||||.|+||++||++|..+|..++..
T Consensus 163 ~~~~~~~---------------~~~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~~ 206 (209)
T cd03380 163 LFPERAA---------------ELLARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAAA 206 (209)
T ss_pred HHHHHHH---------------HHHHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHHH
Confidence 6644211 2345788999999999999999999999999988754
No 29
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=99.59 E-value=8.5e-15 Score=120.61 Aligned_cols=117 Identities=29% Similarity=0.299 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHH
Q 021062 97 HAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (318)
Q Consensus 97 ~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l 176 (318)
..+..+.++++.-.+.+.++|.++.|.||+.. .|.. .....-+-|||||||++-++.+..+.
T Consensus 64 ~~Lv~llLgLlfDli~vaivk~~f~R~rP~~t---~pS~---------------l~~~t~DiYsFPsGHaSRaamv~~~~ 125 (189)
T KOG4268|consen 64 EVLVNLLLGLLFDLITVAIVKKLFKRRRPYET---SPSL---------------LDYLTMDIYSFPSGHASRAAMVSKFF 125 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC---CHHH---------------HHHHhhhhhcCCCcchHHHHHHHHHH
Confidence 34666788888888999999999999999721 0100 01112356999999999988765433
Q ss_pred HHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 177 SLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 177 ~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
..-... ..+.-.++.+.|++.+|+|||.+|+||.+||++|+.||.+=+.++-+..
T Consensus 126 l~~a~~-----------a~Plyv~l~~~walvvglSRv~lGRHyvtDVlaG~fiGylearl~l~~~ 180 (189)
T KOG4268|consen 126 LSHAVL-----------AVPLYVLLLVLWALVVGLSRVMLGRHYVTDVLAGFFIGYLEARLVLLVW 180 (189)
T ss_pred HHHHHh-----------ccchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 221111 1223345567899999999999999999999999999999887776544
No 30
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.53 E-value=5.7e-13 Score=115.11 Aligned_cols=145 Identities=21% Similarity=0.224 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHH---HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccce
Q 021062 69 AVPVYAVLVPVIIFLI---VYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNV 145 (318)
Q Consensus 69 ~~~~~~i~lp~~i~~~---~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~ 145 (318)
...++.-+.|.++.+. +.+.||... .+..+.+.+....++.++|+.+..|||.-. |
T Consensus 29 ~~la~~sL~p~~V~~~f~S~~l~rrEl~-----a~~~~~G~v~Ne~in~viK~il~qpRP~~~----~------------ 87 (228)
T KOG3146|consen 29 HLLAYFSLSPVFVSAGFLSVFLFRRELA-----AIWFVIGQVSNEFINVVIKNILKQPRPVSF----P------------ 87 (228)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhhhhhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----C------------
Confidence 3444555666666554 334566544 566788899999999999999999999521 1
Q ss_pred eecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhH
Q 021062 146 ICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVF 225 (318)
Q Consensus 146 ~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVl 225 (318)
...-..++++||.|+.....+.++..+.....++.. .......+.-.+.+.++..++.||+|++.|++++|+
T Consensus 88 ------~~t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~--~~s~~~~i~s~~~laLs~~v~~sRVyl~yHt~sQVv 159 (228)
T KOG3146|consen 88 ------DTTLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTN--NFSRFLFIKSGLLLALSFYVCYSRVYLKYHTLSQVV 159 (228)
T ss_pred ------ccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 112246799999999998877777666555444321 111122233455567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 021062 226 AGGLLGLVVATFCYLQF 242 (318)
Q Consensus 226 aG~liG~~~a~~~~~~~ 242 (318)
+|+++|.+++.+.|...
T Consensus 160 ~G~ivG~l~g~~Wf~~v 176 (228)
T KOG3146|consen 160 VGAIVGGLVGILWFYLV 176 (228)
T ss_pred HHHHhhhhHHHHHHHHH
Confidence 99999999998877654
No 31
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.48 E-value=3.7e-13 Score=121.64 Aligned_cols=135 Identities=21% Similarity=0.125 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccC-CCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHH
Q 021062 98 AILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCF-PDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFL 176 (318)
Q Consensus 98 ~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~-p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l 176 (318)
.+..+..++.-+.+++..+|..+.|+||....... .+++. ....+..+. .......+.||||||++.+++++..+
T Consensus 87 ~~a~l~~a~~da~ia~~~~K~~~~r~RP~~~~~~~~~~~~~--~~~~~~~w~--p~~~~p~~psyPSGHa~~a~a~a~vL 162 (232)
T cd03398 87 LFAAVNAAMTDAGIAAWDAKYHYRRWRPVTAIRLADTDGNP--ATEADPYWL--PLAGTPPHPSYPSGHATFAGAAATVL 162 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccCHHHHHHhhcccCCC--CCCCCCccc--ccCCCCCCCCCccHHHHHHHHHHHHH
Confidence 34444555566667788999999999997432110 00000 000000111 11123568999999999999999988
Q ss_pred HHHHhhcccccccC--------chhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHH
Q 021062 177 SLYISGKIKAFDRR--------GHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFC 238 (318)
Q Consensus 177 ~~~l~~~~~~~~~~--------~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~ 238 (318)
..++......+... ....+. ......++..++.||||.|+||++||++|..+|..++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~v 230 (232)
T cd03398 163 KALFGSDKVPDTVSEPDEGGPSTGVTRV--WAELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAAA 230 (232)
T ss_pred HHHhCCCCCCCCccccccCCCCCCCccc--HhHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHHH
Confidence 87765432110000 000111 1123456789999999999999999999999999988654
No 32
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.39 E-value=1.9e-11 Score=106.87 Aligned_cols=74 Identities=23% Similarity=0.270 Sum_probs=55.9
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHH
Q 021062 153 VVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGL 232 (318)
Q Consensus 153 ~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~ 232 (318)
.......||||+|++.++.++.++.... + + ....+..++++++++||++.|.||+.||++|+++|.
T Consensus 111 ~~~~~~~~fPS~H~~~a~~~~~~~~~~~----------~---~-~~~~~~~~~~~~i~~s~v~~~~H~~~Dv~~G~~l~~ 176 (186)
T cd03386 111 GFDNPFNAFPSLHVAWAVLAALFLWRHR----------R---R-LLRWLAVLWPLLIWLSTLYLGNHYFIDLVGGIALAL 176 (186)
T ss_pred CCCCCcceeCcHHHHHHHHHHHHHHHHH----------H---H-HHHHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHHH
Confidence 3446789999999999987665544321 0 1 122345668889999999999999999999999999
Q ss_pred HHHHHHHH
Q 021062 233 VVATFCYL 240 (318)
Q Consensus 233 ~~a~~~~~ 240 (318)
++..+..+
T Consensus 177 ~~~~~~~~ 184 (186)
T cd03386 177 LSFYLARR 184 (186)
T ss_pred HHHHHhhc
Confidence 88766543
No 33
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=99.27 E-value=2e-10 Score=98.66 Aligned_cols=177 Identities=17% Similarity=0.128 Sum_probs=117.8
Q ss_pred CCCCCCcCCCcchhHH----HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccc
Q 021062 55 DLKYPFKNNTVPVWAV----PVYAVLVPVIIFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWR 130 (318)
Q Consensus 55 ~~~~p~~~~tv~~~~~----~~~~i~lp~~i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~ 130 (318)
.-.++.+.+.+.+..+ --..+...+..++....++|..+...+....+..++.++..+...+|...+...|..+.+
T Consensus 61 G~~f~~~h~w~le~l~Hr~~K~l~Ia~~~~~Ll~~gv~~R~gra~~r~~ayvf~~~~L~~s~i~~lKalta~~CPWdLv~ 140 (249)
T COG3907 61 GGQFLLKHHWILEYLIHRVGKWLSIAAGLCLLLGMGVRCRGGRAGCRASAYVFVTLVLSTSLISLLKALTAMDCPWDLVR 140 (249)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeecCcccccchhhHHHHHHHHHHHHHHHHHHhhhcCCCHHHHH
Confidence 3456665555444322 112222222333333556677666666667677888899999999999999999986544
Q ss_pred cCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHH
Q 021062 131 CFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVG 210 (318)
Q Consensus 131 c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~ 210 (318)
-+ +...+-..- .+....+..++.||-||++..|+.+...+... +++++++++++ ...+..+++.|
T Consensus 141 yG--G~~~~~~L~-----~~rpp~~~pGhCfPgGHASsGfa~~aLfFa~~-------~~~Prla~l~l-~~g~~~G~l~g 205 (249)
T COG3907 141 YG--GGFPFIGLF-----ESRPPLKAPGHCFPGGHASSGFAWVALFFAAW-------GVCPRLAWLGL-MIGLVAGLLFG 205 (249)
T ss_pred hC--CCCcceEee-----cCCCCCCCCCCcCCCCCccccHHHHHHHHHHc-------ccChHHHHHHH-HHHHHHHHHHh
Confidence 32 222221110 11234456789999999999988654333221 23445555444 45678899999
Q ss_pred HhhhcCCCCChhhhHHHHHHHHHHHHHHHHhhcCCC
Q 021062 211 ISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPPP 246 (318)
Q Consensus 211 ~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~~~~~ 246 (318)
+||+..|.|+.|.-+....+-++++.-.|++++-++
T Consensus 206 ~sq~lrGAHFLsHnLWs~~~~WLv~Lg~f~l~~~~~ 241 (249)
T COG3907 206 ISQQLRGAHFLSHNLWSLTICWLVALGFFYLFFVSP 241 (249)
T ss_pred HHHHhhhhhhhcchHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999887653
No 34
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=99.26 E-value=3.1e-11 Score=112.74 Aligned_cols=130 Identities=24% Similarity=0.230 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccccceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhccc
Q 021062 106 VLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQFNNVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIK 185 (318)
Q Consensus 106 ~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~~~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~ 185 (318)
++.+..+.+.+|+++.-|||.- -|- ..++ ...-.+..+++||.||+++++....+.+.+...
T Consensus 120 ~~~~~Ylggc~KD~~~lPRP~s----PPv-----vrlt-------ls~~~~~EYG~PStHt~natais~~~~~~ls~~-- 181 (407)
T KOG2822|consen 120 WVLVMYLGGCIKDYWCLPRPSS----PPV-----VRLT-------LSEDTTKEYGMPSTHTMNATAISFYFFLVLSTM-- 181 (407)
T ss_pred HHHHHHHhhhhhheeecCCCCC----CCe-----EEEE-------eccchhhhhCCCcchhhhhhHHHHHHHHHHHHh--
Confidence 3455677889999999999961 111 0010 011134679999999999999887754433322
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHh--hcCCCCCCCCCCcc
Q 021062 186 AFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ--FFPPPYHAEGWGPY 255 (318)
Q Consensus 186 ~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~--~~~~~~~~~~~~p~ 255 (318)
++...........+.+++..+++++|||.|+|-.-|+++|.++|+++..+.|.. +++.....+.|-|.
T Consensus 182 --d~~s~p~~~lgl~lv~~y~~lv~lgRiY~GMHgvlDi~sG~ligvl~~~~~~~~~~~~dnf~~s~~~fP~ 251 (407)
T KOG2822|consen 182 --DRESYPIQYLGLSLVLLYYALVCLGRIYCGMHGVLDIVSGLLIGVLILILRYPFVDFIDNFISSSQWFPL 251 (407)
T ss_pred --chhhhHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHhhhHHHHHHhhhhhhHHHhccchhhcCccccH
Confidence 111122245556667778899999999999999999999999999998776544 45566666677765
No 35
>PF14378 PAP2_3: PAP2 superfamily
Probab=98.47 E-value=4.3e-06 Score=73.24 Aligned_cols=68 Identities=32% Similarity=0.359 Sum_probs=47.8
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHH
Q 021062 155 NEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVV 234 (318)
Q Consensus 155 ~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~ 234 (318)
.++...|||.|++.+..++..+. + .+ +. + ....+.+++..++.+|-++.|.||.-|+++|++++.++
T Consensus 122 ~~~~~afPSlH~a~a~l~~~~~~----~-~~----~~---~-~~~~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~ 188 (191)
T PF14378_consen 122 DNGVAAFPSLHVAWAVLCALALW----R-VG----RP---R-WLRALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLA 188 (191)
T ss_pred cccccccCchHHHHHHHHHHHHH----H-cc----cc---H-HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34556899999998865443222 1 11 11 1 12234566788999999999999999999999999876
Q ss_pred H
Q 021062 235 A 235 (318)
Q Consensus 235 a 235 (318)
.
T Consensus 189 ~ 189 (191)
T PF14378_consen 189 I 189 (191)
T ss_pred H
Confidence 4
No 36
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.48 E-value=0.0034 Score=51.73 Aligned_cols=25 Identities=44% Similarity=0.603 Sum_probs=22.8
Q ss_pred CCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 218 WHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 218 ~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
-|.|.+|++|.++|++++++.|..+
T Consensus 127 GH~p~eV~~G~~lGI~i~~i~~~~~ 151 (153)
T COG1963 127 GHTPLEVFAGLLLGILIAWIFYAFF 151 (153)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHh
Confidence 4999999999999999999988765
No 37
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=97.08 E-value=0.0047 Score=51.31 Aligned_cols=18 Identities=61% Similarity=0.820 Sum_probs=16.2
Q ss_pred CCChhhhHHHHHHHHHHH
Q 021062 218 WHHWQDVFAGGLLGLVVA 235 (318)
Q Consensus 218 ~H~~sDVlaG~liG~~~a 235 (318)
-|.|.+|++|+++|+++|
T Consensus 124 GHtp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 124 GHTPLEVFAGALLGIVVA 141 (141)
T ss_pred CCCHHHHHHHHHHHHhhC
Confidence 499999999999999874
No 38
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=96.86 E-value=0.0049 Score=45.62 Aligned_cols=64 Identities=22% Similarity=0.188 Sum_probs=39.5
Q ss_pred CCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHH
Q 021062 161 FPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVA 235 (318)
Q Consensus 161 FPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a 235 (318)
+-|||++..+....+..-+..++. ...|.+..+..+....++ +....||--||+.|..+...+-
T Consensus 6 iFSGHt~~~~l~~l~~~~y~~~~~-------~~~~~~~~~~~~~~~~~i----i~sr~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 6 IFSGHTAFLTLCALFWWEYSPRRF-------WVLKVIMWLLAIIGSFLI----IASRKHYTVDVVLAYYITSLVF 69 (74)
T ss_pred EEchhHHHHHHHHHHHHHHcccch-------hHHHHHHHHHHHHHHHHH----HHcCCCceeehhhHHHHHHHHH
Confidence 469999998876665554433221 113443333333333444 4455999999999998887654
No 39
>KOG3058 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.70 E-value=2.8 Score=40.01 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=73.5
Q ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccCCCCCcccccc----------------c
Q 021062 80 IIFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPNFFWRCFPDGIAVYDQF----------------N 143 (318)
Q Consensus 80 ~i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~~~~~c~p~~~~~~~~~----------------~ 143 (318)
+.++++.+.+.++--+++ +++.++...++..+.-..+.-|=|..-.+|.|.....+... .
T Consensus 128 ~~f~ll~fH~~r~iv~rR----~~f~~gt~y~lR~iTm~vT~LPvP~~h~~C~~k~~~~~~~~~~r~l~~~~~~G~s~~~ 203 (351)
T KOG3058|consen 128 LLFTLLLFHQHRWIVLRR----VFFLLGTLYLLRCITMYVTQLPVPGQHFRCAPKPNGDLGEFLHRALEIWSGLGLSLFG 203 (351)
T ss_pred HHHHHHHHhcchhhHHHH----HHHHHHHHHHHhhheeEEEecccCCCCcccCCcccccHHHHHHHHHHHHHhcCccccc
Confidence 334444445544332222 23333444445555555677889998889988743332210 1
Q ss_pred ceeecCCcccccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhh
Q 021062 144 NVICHGDKHVVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQD 223 (318)
Q Consensus 144 ~~~c~~~~~~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sD 223 (318)
...| +-=.-|||+...+..+.+..-|..+++.. .+++..++...-.++ =+....||--|
T Consensus 204 ~~lC----------GDlmfSGHTlvl~~~~l~~~eY~pr~~~~-------L~~i~wll~~~gi~~----il~sr~HYTID 262 (351)
T KOG3058|consen 204 VRLC----------GDLMFSGHTLVLTLTALFITEYSPRRFII-------LHWISWLLAFVGIFL----ILASRKHYTID 262 (351)
T ss_pred cCcc----------cceeeecchHHHHHHHHHHHHhcccchhH-------HHHHHHHHHHHHHHH----HHHhCCceeEE
Confidence 1123 12346999999888777776665544321 222222222222222 23456899999
Q ss_pred hHHHHHHHHHHHHHHHHhhcC
Q 021062 224 VFAGGLLGLVVATFCYLQFFP 244 (318)
Q Consensus 224 VlaG~liG~~~a~~~~~~~~~ 244 (318)
|+.++-+..-+ +.+|....+
T Consensus 263 VvvAyyittrv-fw~yh~~a~ 282 (351)
T KOG3058|consen 263 VVVAYYITTRV-FWSYHAKAA 282 (351)
T ss_pred EEEehhhHHHH-HHHHHHhcc
Confidence 99998885443 234444433
No 40
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=86.50 E-value=0.21 Score=46.05 Aligned_cols=51 Identities=18% Similarity=0.038 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 192 HVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 192 ~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
++|.++..+++++++++.-+--|++..-|++=.+-=+-+-++++.+.|.++
T Consensus 135 s~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~ 185 (381)
T PF05297_consen 135 SFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYV 185 (381)
T ss_dssp ---------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455555556666666666666677777777633322233344555544443
No 41
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=75.60 E-value=9.1 Score=34.70 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=25.1
Q ss_pred HHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHH
Q 021062 203 LLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 203 l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~ 239 (318)
.+|-...-.+=+ +-|.+..=+.|.++|.+..++.|
T Consensus 204 ~LW~~mll~T~i--yFHT~~EKl~Gl~~g~~~~~~~Y 238 (238)
T PF10261_consen 204 GLWWWMLLMTSI--YFHTILEKLSGLLFGYLGWYITY 238 (238)
T ss_pred HHHHHHHHHHHH--HHCCHHHHHHHHHHHHHhheeeC
Confidence 344444444555 47999999999999998876654
No 42
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=63.21 E-value=2.5e+02 Score=31.38 Aligned_cols=24 Identities=25% Similarity=0.289 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCC
Q 021062 99 ILGLLYSVLVTGVLTDAIKIAVGR 122 (318)
Q Consensus 99 ~l~l~~~~~~~~~i~~~lK~~~gr 122 (318)
++.+.+.+.+..++..++|.....
T Consensus 77 Aw~~~~~~~~~~~~~~l~~~l~~~ 100 (1094)
T PRK02983 77 AWWVLLAYLVLAALLNVALLALGV 100 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc
Confidence 444455555566667777776533
No 43
>PF04238 DUF420: Protein of unknown function (DUF420); InterPro: IPR007352 This is a predicted membrane protein with four transmembrane helices.
Probab=61.94 E-value=89 Score=25.70 Aligned_cols=49 Identities=16% Similarity=0.255 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Q 021062 78 PVIIFLIVYYHRRDVYDLHHAILGLLYSVLVTGVLTDAIKIAVGRPRPN 126 (318)
Q Consensus 78 p~~i~~~~~~~r~~~~~~~~~~l~l~~~~~~~~~i~~~lK~~~grpRP~ 126 (318)
+.+++..+.+.|++..+.++......+++....++....|...+...++
T Consensus 16 ~~ll~~g~~~Ir~~~~~~Hr~~Ml~a~~ls~lFlv~Yl~~~~~~g~~~f 64 (133)
T PF04238_consen 16 AVLLLIGWYFIRRGRIKLHRKLMLTAFVLSALFLVSYLYYHFLGGSTPF 64 (133)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 3344444555555556777777777777777778888899888776664
No 44
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=57.83 E-value=2.6e+02 Score=29.82 Aligned_cols=9 Identities=0% Similarity=-0.020 Sum_probs=3.6
Q ss_pred HHHHHHHhh
Q 021062 112 LTDAIKIAV 120 (318)
Q Consensus 112 i~~~lK~~~ 120 (318)
....+..++
T Consensus 320 ~~p~~~~i~ 328 (843)
T PF09586_consen 320 FIPPLNSIW 328 (843)
T ss_pred HHHHHHHHH
Confidence 334444433
No 45
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=51.66 E-value=1.3e+02 Score=29.85 Aligned_cols=24 Identities=25% Similarity=0.462 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCC
Q 021062 223 DVFAGGLLGLVVATFCYLQFFPPP 246 (318)
Q Consensus 223 DVlaG~liG~~~a~~~~~~~~~~~ 246 (318)
-++--+++|..++.++-.++||..
T Consensus 193 ~ll~P~~ig~ai~~~vslliFP~s 216 (459)
T PF10337_consen 193 TLLKPFLIGIAIALVVSLLIFPES 216 (459)
T ss_pred HHHHHHHHHHHHHHHHheeecCCC
Confidence 444566778888888777777754
No 46
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=50.24 E-value=2.3e+02 Score=26.95 Aligned_cols=14 Identities=21% Similarity=0.105 Sum_probs=8.6
Q ss_pred Ccchhhhhhhcccc
Q 021062 253 GPYAYFRFLRECES 266 (318)
Q Consensus 253 ~p~~~~~~~~~~~~ 266 (318)
+..++.+..++++.
T Consensus 256 RRLA~~Ra~~kR~~ 269 (340)
T PF12794_consen 256 RRLAYERAKEKRAE 269 (340)
T ss_pred HHHHHHHHHHHHHH
Confidence 45666666666654
No 47
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=48.69 E-value=16 Score=29.78 Aligned_cols=9 Identities=11% Similarity=0.586 Sum_probs=3.4
Q ss_pred hHHHHHHHH
Q 021062 68 WAVPVYAVL 76 (318)
Q Consensus 68 ~~~~~~~i~ 76 (318)
|+++++.++
T Consensus 2 W~l~~iii~ 10 (130)
T PF12273_consen 2 WVLFAIIIV 10 (130)
T ss_pred eeeHHHHHH
Confidence 333333333
No 48
>PRK10726 hypothetical protein; Provisional
Probab=42.67 E-value=1.7e+02 Score=23.04 Aligned_cols=80 Identities=10% Similarity=0.017 Sum_probs=46.5
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHhhcccccccCch------hHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHH
Q 021062 153 VVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKAFDRRGH------VAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFA 226 (318)
Q Consensus 153 ~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~~~~~~~------~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVla 226 (318)
..+|..+|+|-|=+-..+....+..-++... .+. .|.-.+.+.++.+.+.|+++....|.--++=...
T Consensus 14 ~~de~s~sl~Gav~GFv~ywlA~aiPfl~YG------~nTlfF~LYTWPFFLALmPvsVlvGi~l~~Ll~g~l~~s~l~t 87 (105)
T PRK10726 14 EDEETTWSLPGAVVGFVSWLLALAIPFLIYG------SNTLFFFLYTWPFFLALMPVSVLVGIALHSLLRGKLLYSILFT 87 (105)
T ss_pred cccCcccccchHHHHHHHHHHHHHHHHHHhc------ccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 3456789999887776665443322222111 011 1233455666666667777888888777777777
Q ss_pred HHHHHHHHHHHH
Q 021062 227 GGLLGLVVATFC 238 (318)
Q Consensus 227 G~liG~~~a~~~ 238 (318)
|..++.+...++
T Consensus 88 ~l~V~~lFwllF 99 (105)
T PRK10726 88 LLTVGCLFWLLF 99 (105)
T ss_pred HHHHHHHHHHHH
Confidence 766665554443
No 49
>PF12084 DUF3561: Protein of unknown function (DUF3561); InterPro: IPR022721 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=41.63 E-value=1.7e+02 Score=23.02 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=47.3
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHhhcccc-cccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHH
Q 021062 153 VVNEGHKSFPSGHTSWSFAGLGFLSLYISGKIKA-FDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLG 231 (318)
Q Consensus 153 ~~~~~~~SFPSGHaa~a~a~~~~l~~~l~~~~~~-~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG 231 (318)
..+|..+|||-|=+-..+....+..-++..-.+. |- ---.|...+.+.++.+.+-++++.+..|.-.++-...+..++
T Consensus 17 ~~de~t~sl~G~v~GF~~~wLAlaiPfl~YG~nTLfF-fLYTWPFFLALmPvsVl~Gi~l~~ll~g~l~~s~~~t~l~V~ 95 (107)
T PF12084_consen 17 EDDEPTWSLPGGVVGFVFWWLALAIPFLVYGSNTLFF-FLYTWPFFLALMPVSVLIGIALSSLLRGKLLWSLLATGLAVG 95 (107)
T ss_pred ccCCCcccccchhHHHHHHHHHHhhHHhhhccchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCcEeeehhhHHHHHH
Confidence 4457789999887776655433222111110000 00 000133455667777777788888888877766666666666
Q ss_pred HHHHHHH
Q 021062 232 LVVATFC 238 (318)
Q Consensus 232 ~~~a~~~ 238 (318)
.+...++
T Consensus 96 ~lFwllF 102 (107)
T PF12084_consen 96 CLFWLLF 102 (107)
T ss_pred HHHHHHH
Confidence 6554443
No 50
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=35.68 E-value=37 Score=27.67 Aligned_cols=23 Identities=13% Similarity=0.127 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCC
Q 021062 224 VFAGGLLGLVVATFCYLQFFPPP 246 (318)
Q Consensus 224 VlaG~liG~~~a~~~~~~~~~~~ 246 (318)
+++|+++|+++++++.++..+..
T Consensus 2 ~~i~lvvG~iiG~~~~r~~~~~~ 24 (128)
T PF06295_consen 2 AIIGLVVGLIIGFLIGRLTSSNQ 24 (128)
T ss_pred hHHHHHHHHHHHHHHHHHhccch
Confidence 57899999999999988875543
No 51
>KOG3750 consensus Inositol phospholipid synthesis protein, Scs3p [Lipid transport and metabolism]
Probab=33.50 E-value=1.3e+02 Score=27.85 Aligned_cols=29 Identities=31% Similarity=0.625 Sum_probs=24.1
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHHHhhcC
Q 021062 216 DYWHHWQDVFAGGLLGLVVATFCYLQFFP 244 (318)
Q Consensus 216 ~g~H~~sDVlaG~liG~~~a~~~~~~~~~ 244 (318)
.+.|-...=+.|++.|++.-++.|+..+|
T Consensus 219 iYyH~~~ekVig~l~g~l~W~~tY~~~y~ 247 (270)
T KOG3750|consen 219 IYYHTLLEKVIGALTGLLTWYFTYRFWYP 247 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheeeecc
Confidence 45788889999999999888888887766
No 52
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=31.01 E-value=3e+02 Score=28.65 Aligned_cols=91 Identities=13% Similarity=-0.022 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHhhcccccccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhhc
Q 021062 164 GHTSWSFAGLGFLSLYISGKIKAFDRRGHVAKLCLVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFF 243 (318)
Q Consensus 164 GHaa~a~a~~~~l~~~l~~~~~~~~~~~~~~r~~~~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~~ 243 (318)
+|...+.+...+..+++.++.+ +...+.-.....+..+|+...+..+....-.++.-.++-++..+.|..+...+..
T Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~---~~~~~~l~~a~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~~~w~~~l~~~~~ 78 (679)
T TIGR02916 2 GYGAAAVAYLFLSLLLVTAWRQ---RLAGGLLLLAAALSAVWALASAALVYMDYPWPLLVLVLEVFRDAAWLAFLLTLLR 78 (679)
T ss_pred hhHHHHHHHHHHHHHHHHHhcc---cchhHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHhc
Q ss_pred CCCCCCCCCCcchh
Q 021062 244 PPPYHAEGWGPYAY 257 (318)
Q Consensus 244 ~~~~~~~~~~p~~~ 257 (318)
.+...+.+..+...
T Consensus 79 ~~~~~~~~~~~~~~ 92 (679)
T TIGR02916 79 RPATSGKPFNQRPK 92 (679)
T ss_pred ccccccCcccchHH
No 53
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=30.96 E-value=60 Score=26.98 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=20.6
Q ss_pred CCCChhhhHHHHHHHHHHHHHHHH
Q 021062 217 YWHHWQDVFAGGLLGLVVATFCYL 240 (318)
Q Consensus 217 g~H~~sDVlaG~liG~~~a~~~~~ 240 (318)
..++..|.+.|+++|+++..++..
T Consensus 85 ~~~~~~dlL~G~liGff~g~~~~~ 108 (140)
T PF13373_consen 85 NSGHNDDLLWGLLIGFFFGLFSLF 108 (140)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHH
Confidence 567789999999999999999843
No 54
>PF07415 Herpes_LMP2: Gammaherpesvirus latent membrane protein (LMP2) protein; InterPro: IPR010881 This family consists of several Gammaherpesvirus latent membrane protein (LMP2) proteins. Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) is a human gammaherpesvirus that infects and establishes latency in B lymphocytes in vivo. The latent membrane protein 2 (LMP2) gene is expressed in latently infected B cells and encodes two protein isoforms, LMP2A and LMP2B, that are identical except for an additional N-terminal 119 aa cytoplasmic domain which is present in the LMP2A isoform. LMP2A is thought to play a key role in either the establishment or the maintenance of latency and/or the reactivation of productive infection from the latent state. The significance of LMP2B and its role in pathogenesis remain unclear [].; GO: 0019042 latent virus infection, 0033644 host cell membrane; PDB: 2JO9_B 1UXW_C.
Probab=29.49 E-value=18 Score=34.53 Aligned_cols=32 Identities=16% Similarity=-0.051 Sum_probs=0.0
Q ss_pred CCcccccccccccCCCCCccccccCCCCCchhhh
Q 021062 279 QTMLSEVVNEQHERNNNGFLGLQSVSDSNSLVND 312 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (318)
|+-+.|.++-...-++||.-| .+++++|++++
T Consensus 72 ~~l~~qd~~ly~~l~~~~~~g--~ppppysp~~~ 103 (489)
T PF07415_consen 72 QPLGQQDPSLYAGLGQNGGNG--LPPPPYSPRRQ 103 (489)
T ss_dssp ----------------------------------
T ss_pred CccCCCChhHHhhhcCCCCCC--CCCCCCCCCcc
Confidence 333444444444445555545 56778887754
No 55
>PRK06080 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated
Probab=29.45 E-value=4.5e+02 Score=24.11 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=21.9
Q ss_pred HHHHhh--hcCCCCChhhhHHHHHHHHHHHHHHHHh
Q 021062 208 LVGISR--VDDYWHHWQDVFAGGLLGLVVATFCYLQ 241 (318)
Q Consensus 208 lv~~SR--v~~g~H~~sDVlaG~liG~~~a~~~~~~ 241 (318)
...+|. .....+-+.+++.|...|.......+..
T Consensus 126 ~~~Ys~~p~~~~~~glge~~~~~~~G~~~~~~~~~~ 161 (293)
T PRK06080 126 AILYTGGPKPYGYTGLGELFVGVFFGLVIVLGTYYL 161 (293)
T ss_pred hhhhcCCCCccCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 344443 2334566889999999888776665443
No 56
>PLN02248 cellulose synthase-like protein
Probab=29.15 E-value=8.7e+02 Score=27.34 Aligned_cols=39 Identities=26% Similarity=0.376 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhhhcCCCC-ChhhhHHHHHHHHHHHHHHH
Q 021062 201 LPLLFASLVGISRVDDYWH-HWQDVFAGGLLGLVVATFCY 239 (318)
Q Consensus 201 ~~l~~a~lv~~SRv~~g~H-~~sDVlaG~liG~~~a~~~~ 239 (318)
+.-++++.+|++|+..+.+ .+.+.+++.++.+.+.+..|
T Consensus 1045 llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~ly 1084 (1135)
T PLN02248 1045 MVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLY 1084 (1135)
T ss_pred HHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHH
Confidence 4456778889999887653 23455555555444433333
No 57
>PF14316 DUF4381: Domain of unknown function (DUF4381)
Probab=27.08 E-value=3.1e+02 Score=22.54 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHH------HHHHHHHHHHHHhhCCCCC
Q 021062 94 DLHHAILGLLYSV------LVTGVLTDAIKIAVGRPRP 125 (318)
Q Consensus 94 ~~~~~~l~l~~~~------~~~~~i~~~lK~~~grpRP 125 (318)
+.++.++..+-.+ -...-++.++|...-..-|
T Consensus 49 ~yrr~Al~~L~~l~~~~~~~~~~~l~~LLKr~a~~~~p 86 (146)
T PF14316_consen 49 RYRREALRELAQLESSDDAEWLAALNELLKRVALQYYP 86 (146)
T ss_pred HHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHhCC
Confidence 3455555544333 3455667778877544334
No 58
>PRK12438 hypothetical protein; Provisional
Probab=25.51 E-value=4.2e+02 Score=29.32 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=12.6
Q ss_pred hhhhhhhHHHHHHHHHHH-HHHHHHh
Q 021062 15 VVVARKHMHDWLIFLFLV-VMDIILN 39 (318)
Q Consensus 15 ~~~~~~~~~dwi~l~~l~-~~~~~~~ 39 (318)
.+-+|.|+..++.+++++ ++.+++.
T Consensus 206 s~~ar~hL~vl~~~~~ll~A~~ywLd 231 (991)
T PRK12438 206 TQAARVQLAVFAGAFVLLKAVAYWLD 231 (991)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344466765555444443 4445554
No 59
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.35 E-value=3.3e+02 Score=21.26 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhhcCCCCChhh---hHHHHHHHHHHHHHHHH
Q 021062 201 LPLLFASLVGISRVDDYWHHWQD---VFAGGLLGLVVATFCYL 240 (318)
Q Consensus 201 ~~l~~a~lv~~SRv~~g~H~~sD---VlaG~liG~~~a~~~~~ 240 (318)
+++++++++| |..| .||+++ .+...++|+++++...+
T Consensus 54 ~pil~G~~lG--~WLD-~~~~t~~~~tl~~lllGv~~G~~n~w 93 (100)
T TIGR02230 54 IPTLLGVAVG--IWLD-RHYPSPFSWTLTMLIVGVVIGCLNAW 93 (100)
T ss_pred HHHHHHHHHH--HHHH-hhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3444444444 4444 466655 56677777777766443
No 60
>PF03699 UPF0182: Uncharacterised protein family (UPF0182); InterPro: IPR005372 This family contains uncharacterised integral membrane proteins.; GO: 0016021 integral to membrane
Probab=24.73 E-value=5e+02 Score=27.96 Aligned_cols=25 Identities=28% Similarity=0.441 Sum_probs=11.8
Q ss_pred hhhhhhhHHHHHHHHHH-HHHHHHHh
Q 021062 15 VVVARKHMHDWLIFLFL-VVMDIILN 39 (318)
Q Consensus 15 ~~~~~~~~~dwi~l~~l-~~~~~~~~ 39 (318)
.+-++.|+.-.+.++++ .++.+++.
T Consensus 196 ~~~a~~hL~~L~~~~~l~~a~~y~L~ 221 (774)
T PF03699_consen 196 SRAARRHLSILLALFFLLKAVGYWLD 221 (774)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455565555544333 34444443
No 61
>COG4042 Predicted membrane protein [Function unknown]
Probab=22.29 E-value=3.1e+02 Score=21.05 Aligned_cols=41 Identities=20% Similarity=0.069 Sum_probs=24.8
Q ss_pred HHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHh--hcCCCC
Q 021062 207 SLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQ--FFPPPY 247 (318)
Q Consensus 207 ~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~--~~~~~~ 247 (318)
-+.++++=..|.|-.--...|++.|.+.+.+.-+. .||+|+
T Consensus 60 G~tai~i~~~G~~~i~~a~lgavaG~lsA~~taY~ek~FprPe 102 (104)
T COG4042 60 GITAIFINLFGDYIIPLASLGAVAGLLSALLTAYAEKLFPRPE 102 (104)
T ss_pred chHHHhHHhcccccchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34556666677777555566777777766654332 455554
No 62
>PF11190 DUF2976: Protein of unknown function (DUF2976); InterPro: IPR021356 Members of this protein family are found occasionally on plasmids such as the Pseudomonas putida TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in a region flanked by markers of conjugative transfer and/or transposition.
Probab=22.19 E-value=3.6e+02 Score=20.52 Aligned_cols=44 Identities=20% Similarity=0.329 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 199 VFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 199 ~~~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
.++....+++-.+.-+.+|.-.|.|..+-.++|.++-.++.++.
T Consensus 38 afi~Va~~~i~~y~eir~gK~~W~~fg~~~vVGvvLlv~viwLl 81 (87)
T PF11190_consen 38 AFIVVAKAAISTYNEIRDGKKTWGDFGATVVVGVVLLVFVIWLL 81 (87)
T ss_pred HHHHHHHHHHHHHHHHHcCcccHHHhhhHHHHHHHHHHHHHHHH
Confidence 34455566777888899999999999999999999887777665
No 63
>COG4980 GvpP Gas vesicle protein [General function prediction only]
Probab=22.13 E-value=99 Score=24.85 Aligned_cols=23 Identities=30% Similarity=0.509 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcC
Q 021062 222 QDVFAGGLLGLVVATFCYLQFFP 244 (318)
Q Consensus 222 sDVlaG~liG~~~a~~~~~~~~~ 244 (318)
.|.+.|.++|.+++..+-.++-|
T Consensus 5 ~~~l~G~liGgiiGa~aaLL~AP 27 (115)
T COG4980 5 KDFLFGILIGGIIGAAAALLFAP 27 (115)
T ss_pred chHHHHHHHHHHHHHHHHHHhCC
Confidence 57889999999999888877743
No 64
>COG4129 Predicted membrane protein [Function unknown]
Probab=21.96 E-value=1.5e+02 Score=28.38 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=18.4
Q ss_pred cCCCCChhhhHHHHHHHHHHHHHHHHhh
Q 021062 215 DDYWHHWQDVFAGGLLGLVVATFCYLQF 242 (318)
Q Consensus 215 ~~g~H~~sDVlaG~liG~~~a~~~~~~~ 242 (318)
+.-.|.-.+-+.|.++|.+++.+++.++
T Consensus 51 ~~s~~~~~~r~~g~~iG~~~a~l~~~l~ 78 (332)
T COG4129 51 KRSLKRALQRLLGNALGAILAVLFFLLF 78 (332)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3344556677777777777777766655
No 65
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=21.38 E-value=2.2e+02 Score=29.30 Aligned_cols=38 Identities=21% Similarity=0.256 Sum_probs=30.4
Q ss_pred HhhhcCCCCChhhhHHHHHHHHHHHHHHHHhhcCCCCC
Q 021062 211 ISRVDDYWHHWQDVFAGGLLGLVVATFCYLQFFPPPYH 248 (318)
Q Consensus 211 ~SRv~~g~H~~sDVlaG~liG~~~a~~~~~~~~~~~~~ 248 (318)
++...+-..-....+.|.++|..++++++..+.|...+
T Consensus 379 fa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~~ 416 (650)
T PF04632_consen 379 FATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLDG 416 (650)
T ss_pred HcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 67777788888888999999999988888777776553
No 66
>PF08019 DUF1705: Domain of unknown function (DUF1705); InterPro: IPR012549 Some members of this family are putative bacterial membrane proteins. This domain is found immediately N-terminal to the sulphatase domain in many sulphatases.; GO: 0016021 integral to membrane
Probab=21.26 E-value=4.5e+02 Score=21.75 Aligned_cols=12 Identities=17% Similarity=0.465 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHH
Q 021062 76 LVPVIIFLIVYY 87 (318)
Q Consensus 76 ~lp~~i~~~~~~ 87 (318)
++|.+++.....
T Consensus 77 vlP~~~l~~~~i 88 (156)
T PF08019_consen 77 VLPALLLWRVRI 88 (156)
T ss_pred HHHHHHHHHHHh
Confidence 445554444434
No 67
>PRK11560 phosphoethanolamine transferase; Provisional
Probab=21.12 E-value=2.6e+02 Score=28.80 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=8.2
Q ss_pred HhccCcccccccCCccCC
Q 021062 38 LNAIDPFYRFVGKDMMTD 55 (318)
Q Consensus 38 ~~~i~p~~~f~~~~~~~~ 55 (318)
.+++..+.-.+..+|+.+
T Consensus 89 ~Yf~~~ygv~id~~Mi~N 106 (558)
T PRK11560 89 SYYMTFFNVVIGYGIIAS 106 (558)
T ss_pred HHHHHhCCCeeeHHHHHH
Confidence 344444444555554433
No 68
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.11 E-value=1.1e+02 Score=24.38 Aligned_cols=40 Identities=15% Similarity=-0.055 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhhhcCCCCChhhhHHHHHHHHHHHHHHHH
Q 021062 201 LPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYL 240 (318)
Q Consensus 201 ~~l~~a~lv~~SRv~~g~H~~sDVlaG~liG~~~a~~~~~ 240 (318)
..+++++++|+--=+.---.|-=.+...+||+..+++..+
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4445555666443333333455666667777666665544
Done!