Your job contains 1 sequence.
>021064
MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNT
MMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK
LGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAA
PHMFVNAYKNVVAVALATEYSFPQADKVKEYLAVCISCTFPSDCIVLYIFTKSIIIYHRM
NAGPKQVCCCCCPGCWRW
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021064
(318 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083564 - symbol:AT3G09200 species:3702 "Arabi... 1161 6.9e-118 1
TAIR|locus:2061231 - symbol:AT2G40010 species:3702 "Arabi... 1152 6.2e-117 1
TAIR|locus:2074623 - symbol:AT3G11250 species:3702 "Arabi... 1150 1.0e-116 1
UNIPROTKB|P47826 - symbol:RPLP0 "60S acidic ribosomal pro... 711 3.3e-70 1
FB|FBgn0000100 - symbol:RpLP0 "Ribosomal protein LP0" spe... 709 5.5e-70 1
ZFIN|ZDB-GENE-000629-1 - symbol:rplp0 "ribosomal protein,... 701 3.8e-69 1
UNIPROTKB|F1MDN4 - symbol:RPLP0 "60S acidic ribosomal pro... 697 1.0e-68 1
UNIPROTKB|Q95140 - symbol:RPLP0 "60S acidic ribosomal pro... 697 1.0e-68 1
UNIPROTKB|P05388 - symbol:RPLP0 "60S acidic ribosomal pro... 697 1.0e-68 1
UNIPROTKB|F1PUX4 - symbol:RPLP0 "Uncharacterized protein"... 696 1.3e-68 1
UNIPROTKB|Q29214 - symbol:RPLP0 "60S acidic ribosomal pro... 696 1.3e-68 1
RGD|621247 - symbol:Rplp0 "ribosomal protein, large, P0" ... 695 1.7e-68 1
MGI|MGI:1927636 - symbol:Rplp0 "ribosomal protein, large,... 692 3.5e-68 1
UNIPROTKB|Q8NHW5 - symbol:RPLP0P6 "60S acidic ribosomal p... 677 1.3e-66 1
WB|WBGene00004408 - symbol:rla-0 species:6239 "Caenorhabd... 667 1.5e-65 1
CGD|CAL0001932 - symbol:RPP0 species:5476 "Candida albica... 663 4.1e-65 1
ASPGD|ASPL0000036346 - symbol:AN2734 species:162425 "Emer... 660 8.5e-65 1
UNIPROTKB|F1NB66 - symbol:RPLP0 "60S acidic ribosomal pro... 652 6.0e-64 1
UNIPROTKB|E2RLZ4 - symbol:E2RLZ4 "Uncharacterized protein... 633 6.2e-62 1
POMBASE|SPCC18.14c - symbol:rpp0 "60S acidic ribosomal pr... 632 7.9e-62 1
UNIPROTKB|F8VU65 - symbol:RPLP0 "60S acidic ribosomal pro... 630 1.3e-61 1
GENEDB_PFALCIPARUM|PF11_0313 - symbol:PF11_0313 "ribosoma... 621 1.2e-60 1
UNIPROTKB|Q8II61 - symbol:PF11_0313 "60S ribosomal protei... 621 1.2e-60 1
UNIPROTKB|F8VW21 - symbol:RPLP0 "60S acidic ribosomal pro... 609 2.2e-59 1
UNIPROTKB|F1M2B8 - symbol:F1M2B8 "Uncharacterized protein... 606 4.5e-59 1
SGD|S000004332 - symbol:RPP0 "Conserved ribosomal protein... 605 5.7e-59 1
DICTYBASE|DDB_G0286501 - symbol:rplP0 "60S acidic ribosom... 565 9.9e-55 1
RGD|1564469 - symbol:RGD1564469 "similar to Acidic riboso... 554 1.5e-53 1
UNIPROTKB|F8VZS0 - symbol:RPLP0 "60S acidic ribosomal pro... 330 1.4e-52 2
UNIPROTKB|Q3B7A4 - symbol:RPLP0 "60S acidic ribosomal pro... 367 6.8e-47 2
UNIPROTKB|J9P5Q4 - symbol:J9P5Q4 "Uncharacterized protein... 456 3.5e-43 1
UNIPROTKB|F1LWD6 - symbol:F1LWD6 "Uncharacterized protein... 437 3.6e-41 1
UNIPROTKB|F8VPE8 - symbol:RPLP0 "60S acidic ribosomal pro... 390 3.5e-36 1
UNIPROTKB|F8VWS0 - symbol:RPLP0 "60S acidic ribosomal pro... 367 9.5e-34 1
UNIPROTKB|G3V210 - symbol:RPLP0 "60S acidic ribosomal pro... 367 9.5e-34 1
UNIPROTKB|F8VRK7 - symbol:RPLP0 "60S acidic ribosomal pro... 327 1.6e-29 1
UNIPROTKB|F8VQY6 - symbol:RPLP0 "60S acidic ribosomal pro... 322 5.6e-29 1
UNIPROTKB|F8VWV4 - symbol:RPLP0 "60S acidic ribosomal pro... 254 9.0e-22 1
UNIPROTKB|F1LXL8 - symbol:F1LXL8 "Uncharacterized protein... 253 1.1e-21 1
UNIPROTKB|F8VS58 - symbol:RPLP0 "60S acidic ribosomal pro... 232 1.9e-19 1
UNIPROTKB|G4MVM1 - symbol:MGG_08908 "mRNA turnover protei... 167 7.9e-11 1
UNIPROTKB|F8W1K8 - symbol:RPLP0 "60S acidic ribosomal pro... 141 2.8e-09 1
SGD|S000001492 - symbol:MRT4 "Protein involved in mRNA tu... 150 8.7e-09 1
ZFIN|ZDB-GENE-050417-142 - symbol:mrto4 "mRNA turnover 4 ... 145 4.5e-08 1
UNIPROTKB|F1M7E2 - symbol:F1M7E2 "Uncharacterized protein... 128 7.7e-08 1
FB|FBgn0033485 - symbol:RpLP0-like "Ribosomal protein LP0... 140 2.4e-07 1
UNIPROTKB|F1P353 - symbol:MRTO4 "Uncharacterized protein"... 135 8.5e-07 1
TAIR|locus:2032970 - symbol:AT1G25260 "AT1G25260" species... 133 1.2e-06 1
POMBASE|SPBC11G11.03 - symbol:mrt4 "mRNA turnover and rib... 132 1.7e-06 1
MGI|MGI:1917152 - symbol:Mrto4 "MRT4, mRNA turnover 4, ho... 130 2.9e-06 1
ASPGD|ASPL0000002010 - symbol:AN6902 species:162425 "Emer... 130 3.2e-06 1
CGD|CAL0006176 - symbol:MRT4 species:5476 "Candida albica... 127 5.6e-06 1
UNIPROTKB|Q5AC00 - symbol:MRT4 "Potential rRNA processing... 127 5.6e-06 1
WB|WBGene00017347 - symbol:F10E7.5 species:6239 "Caenorha... 125 8.2e-06 1
UNIPROTKB|Q9UKD2 - symbol:MRTO4 "mRNA turnover protein 4 ... 123 2.0e-05 1
UNIPROTKB|F1SUQ2 - symbol:MRTO4 "Uncharacterized protein"... 122 2.6e-05 1
UNIPROTKB|E2RG17 - symbol:MRTO4 "Uncharacterized protein"... 121 3.4e-05 1
UNIPROTKB|A4FV84 - symbol:MRTO4 "mRNA turnover protein 4 ... 120 4.5e-05 1
RGD|1311709 - symbol:Mrto4 "mRNA turnover 4 homolog (S. c... 116 7.3e-05 1
>TAIR|locus:2083564 [details] [associations]
symbol:AT3G09200 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0010043
"response to zinc ion" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT3G09200.1 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0010043 GO:GO:0048046 GO:GO:0009651 GO:GO:0009409
GO:GO:0005507 GO:GO:0042254 GO:GO:0003735 GO:GO:0022626
EMBL:AC011436 GO:GO:0006414 EMBL:AC009326 eggNOG:COG0244
HOGENOM:HOG000210987 KO:K02941 ProtClustDB:CLSN2683388
EMBL:AF370225 EMBL:AY059117 EMBL:AY086582 EMBL:Z26534
IPI:IPI00517961 RefSeq:NP_187531.1 UniGene:At.21866
ProteinModelPortal:Q42112 SMR:Q42112 STRING:Q42112 PaxDb:Q42112
PRIDE:Q42112 ProMEX:Q42112 GeneID:820076 KEGG:ath:AT3G09200
TAIR:At3g09200 InParanoid:Q42112 OMA:AVATEYT PhylomeDB:Q42112
Genevestigator:Q42112 GermOnline:AT3G09200 Uniprot:Q42112
Length = 320
Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
Identities = 226/271 (83%), Positives = 250/271 (92%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
+VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
MKR++R+H+E TGNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAP
Sbjct: 61 MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI++GDKVGSSEAALLAKL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAP 241
GIRPFSYGLVVQSVY+NGSV+SPEVLDL+ED LVEKFAS +SMVT+LALA+SYPTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240
Query: 242 HMFVNAYKNVVAVALATEYSFPQADKVKEYL 272
HMF+NAYKN +A+A+ATEY+FPQA+KVKEYL
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYL 271
>TAIR|locus:2061231 [details] [associations]
symbol:AT2G40010 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT2G40010.1 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0022626 EMBL:AF002109
GO:GO:0006414 eggNOG:COG0244 EMBL:BT001919 IPI:IPI00525504
PIR:B84824 RefSeq:NP_181530.1 UniGene:At.28353 UniGene:At.49578
ProteinModelPortal:O04204 SMR:O04204 IntAct:O04204 STRING:O04204
GeneID:818589 KEGG:ath:AT2G40010 TAIR:At2g40010
HOGENOM:HOG000210987 InParanoid:O04204 KO:K02941 OMA:APIFEKD
PhylomeDB:O04204 ProtClustDB:CLSN2683388 Genevestigator:O04204
GermOnline:AT2G40010 Uniprot:O04204
Length = 317
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 226/272 (83%), Positives = 251/272 (92%)
Query: 1 MVVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNT 60
M VKA+KAEKKI YD+KLCQLL EY+QILV AADNVGS QLQNIR+GLRGDSVVLMGKNT
Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60
Query: 61 MMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVA 120
MMKR++R+HA+KTGN AFL+L+PLLQGNVGLIFTKGDL GAPARVGLVA
Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180
PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KGDKVGSSEAALLAK
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
Query: 181 LGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAA 240
LGIRPFSYGLVV+SVY+NGSV++PEVL+L+EDDLVEKFA+ VSM+TAL+LAISYPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240
Query: 241 PHMFVNAYKNVVAVALATEYSFPQADKVKEYL 272
PHMF+NAYKNV+AVALATEYSFPQA+ VKE+L
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFL 272
>TAIR|locus:2074623 [details] [associations]
symbol:AT3G11250 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT3G11250.1 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 GO:GO:0009651 GO:GO:0042254 GO:GO:0003735
GO:GO:0022626 EMBL:AC073395 GO:GO:0006414 HOGENOM:HOG000210987
KO:K02941 ProtClustDB:CLSN2683388 EMBL:AY056150 EMBL:AY091201
EMBL:AY087728 IPI:IPI00523299 RefSeq:NP_187734.1 UniGene:At.17400
ProteinModelPortal:P57691 SMR:P57691 STRING:P57691 PRIDE:P57691
ProMEX:P57691 GeneID:820296 KEGG:ath:AT3G11250 TAIR:At3g11250
InParanoid:P57691 OMA:GGVREKK PhylomeDB:P57691
Genevestigator:P57691 GermOnline:AT3G11250 Uniprot:P57691
Length = 323
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 223/271 (82%), Positives = 250/271 (92%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
+VKA+KAEKKIAYD KLCQL++EYTQILV AADNVGS QLQNIR+GLRGDSVVLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
MKR++R+H+E +GNTA LNL+PLLQGNVGLIFTKGDL GAPARVGLVAP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
IDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI++GDKVGSSEAALLAKL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAP 241
GIRPFSYGLVVQSVY+NGSV+SPEVLDL+ED LVEKFAS +SMVT+LALA+SYPTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240
Query: 242 HMFVNAYKNVVAVALATEYSFPQADKVKEYL 272
HMF+NAYKN +A+A+AT+Y+FPQA+KVKE+L
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFL 271
>UNIPROTKB|P47826 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 EMBL:L28704
IPI:IPI00588222 PIR:I50151 RefSeq:NP_990318.1 UniGene:Gga.33624
ProteinModelPortal:P47826 SMR:P47826 STRING:P47826 PRIDE:P47826
GeneID:395835 KEGG:gga:395835 InParanoid:P47826 NextBio:20815903
Uniprot:P47826
Length = 316
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 141/270 (52%), Positives = 186/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + V ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP D
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD++E+ L ++F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
VN YK V+AVA+ T+Y+FP A+KVK +LA
Sbjct: 241 IVNGYKRVLAVAVETDYTFPLAEKVKAFLA 270
>FB|FBgn0000100 [details] [associations]
symbol:RpLP0 "Ribosomal protein LP0" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0006281 "DNA repair" evidence=NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005634 EMBL:AE014296 GO:GO:0005811 GO:GO:0006281
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0003906
GO:GO:0006414 eggNOG:COG0244 KO:K02941 CTD:6175
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:M25772 EMBL:AY075528
EMBL:BT021447 PIR:A30223 RefSeq:NP_524211.1 UniGene:Dm.7933
ProteinModelPortal:P19889 SMR:P19889 DIP:DIP-21968N IntAct:P19889
MINT:MINT-235412 STRING:P19889 PaxDb:P19889 PRIDE:P19889
EnsemblMetazoa:FBtr0078481 EnsemblMetazoa:FBtr0334113 GeneID:40451
KEGG:dme:Dmel_CG7490 FlyBase:FBgn0000100 InParanoid:P19889
OrthoDB:EOG4J6Q6N PhylomeDB:P19889 GenomeRNAi:40451 NextBio:818852
Bgee:P19889 GermOnline:CG7490 Uniprot:P19889
Length = 317
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 135/271 (49%), Positives = 186/271 (68%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
+V+ +KA K Y K+ +L +E+ + + ADNVGS Q+QNIR LRG +VVLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
M++ IR H E N L+P ++GNVG +FTKGDL APAR G +AP
Sbjct: 61 MRKAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAP 118
Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
+ V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V +++ GDKVG+SEA LL L
Sbjct: 119 LHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNML 178
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAP 241
I PFSYGL+V VY++GS++SPE+LD+ +DL KF V+ + A+ L++ YPT+A+AP
Sbjct: 179 NISPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAP 238
Query: 242 HMFVNAYKNVVAVALATEYSFPQADKVKEYL 272
H N +KN++A+A TE F +A +KEY+
Sbjct: 239 HSIANGFKNLLAIAATTEVEFKEATTIKEYI 269
>ZFIN|ZDB-GENE-000629-1 [details] [associations]
symbol:rplp0 "ribosomal protein, large, P0"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
ZFIN:ZDB-GENE-000629-1 GO:GO:0042254 GO:GO:0005840 GO:GO:0009790
GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 EMBL:AF134852 IPI:IPI00497680
UniGene:Dr.55617 ProteinModelPortal:Q9PV90 SMR:Q9PV90 STRING:Q9PV90
PRIDE:Q9PV90 InParanoid:Q9PV90 NextBio:20892355 Uniprot:Q9PV90
Length = 319
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 141/273 (51%), Positives = 185/273 (67%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL+++ + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG- 182
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNM 180
Query: 183 --IRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAA 240
I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F V + ++ L I YPTLA+
Sbjct: 181 LNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASI 240
Query: 241 PHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 273
PH +N YK V+AV + T+Y+FP A+KVK YLA
Sbjct: 241 PHTIINGYKRVLAVTVETDYTFPLAEKVKAYLA 273
>UNIPROTKB|F1MDN4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0005634 GO:GO:0042254 GO:GO:0022625 IPI:IPI00703564
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:DAAA02045445
Ensembl:ENSBTAT00000055086 ArrayExpress:F1MDN4 Uniprot:F1MDN4
Length = 320
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 136/270 (50%), Positives = 185/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLA 270
>UNIPROTKB|Q95140 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 HOVERGEN:HBG000711
OrthoDB:EOG4VDQ10 EMBL:BT021080 EMBL:BC102074 EMBL:U75275
EMBL:AF013214 IPI:IPI00703564 RefSeq:NP_001012700.1 UniGene:Bt.8462
ProteinModelPortal:Q95140 SMR:Q95140 STRING:Q95140 PRIDE:Q95140
GeneID:286868 KEGG:bta:286868 CTD:6175 NextBio:20806517
Uniprot:Q95140
Length = 318
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 136/270 (50%), Positives = 185/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLA 270
>UNIPROTKB|P05388 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0005634
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0000184 GO:GO:0006413
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0244 EMBL:AC004263 KO:K02941 HPA:HPA003512
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 OMA:AYMHAFN
EMBL:M17885 EMBL:BC000087 EMBL:BC000345 EMBL:BC000752 EMBL:BC001127
EMBL:BC001834 EMBL:BC003655 EMBL:BC005863 EMBL:BC008092
EMBL:BC008594 EMBL:BC009867 EMBL:BC015173 EMBL:BC015690
EMBL:AB007187 IPI:IPI00008530 PIR:A27125 RefSeq:NP_000993.1
RefSeq:NP_444505.1 UniGene:Hs.546285 ProteinModelPortal:P05388
SMR:P05388 IntAct:P05388 MINT:MINT-193149 STRING:P05388
PhosphoSite:P05388 DMDM:133041 REPRODUCTION-2DPAGE:P05388
PaxDb:P05388 PRIDE:P05388 DNASU:6175 Ensembl:ENST00000228306
Ensembl:ENST00000392514 Ensembl:ENST00000551150 GeneID:6175
KEGG:hsa:6175 UCSC:uc001txp.3 GeneCards:GC12M120634 HGNC:HGNC:10371
MIM:180510 neXtProt:NX_P05388 PharmGKB:PA34772 InParanoid:P05388
PhylomeDB:P05388 ChiTaRS:RPLP0 GenomeRNAi:6175 NextBio:23989
ArrayExpress:P05388 Bgee:P05388 CleanEx:HS_RPLP0
Genevestigator:P05388 GermOnline:ENSG00000089157 Uniprot:P05388
Length = 317
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 136/270 (50%), Positives = 185/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLA 270
>UNIPROTKB|F1PUX4 [details] [associations]
symbol:RPLP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 KO:K02941 CTD:6175 GeneTree:ENSGT00390000017839
OMA:AYMHAFN EMBL:AAEX03014732 RefSeq:NP_001239066.1
Ensembl:ENSCAFT00000016229 GeneID:609159 KEGG:cfa:609159
Uniprot:F1PUX4
Length = 317
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 135/270 (50%), Positives = 185/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GL++Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLA 270
>UNIPROTKB|Q29214 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 HOVERGEN:HBG000711
OrthoDB:EOG4VDQ10 EMBL:DQ316319 EMBL:F14800 RefSeq:NP_001092068.1
UniGene:Ssc.53738 ProteinModelPortal:Q29214 SMR:Q29214
STRING:Q29214 GeneID:100049695 KEGG:ssc:100049695
ArrayExpress:Q29214 Uniprot:Q29214
Length = 318
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 135/270 (50%), Positives = 185/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GL++Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLA 270
>RGD|621247 [details] [associations]
symbol:Rplp0 "ribosomal protein, large, P0" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0071353 "cellular response to
interleukin-4" evidence=ISO] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 RGD:621247 GO:GO:0005634 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0030529
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:X15096 EMBL:Z29530
EMBL:BC062028 IPI:IPI00200147 PIR:S08021 RefSeq:NP_071797.1
UniGene:Rn.1079 ProteinModelPortal:P19945 SMR:P19945 IntAct:P19945
STRING:P19945 PhosphoSite:P19945 PRIDE:P19945
Ensembl:ENSRNOT00000001518 GeneID:64205 KEGG:rno:64205
InParanoid:P19945 NextBio:612910 Genevestigator:P19945
GermOnline:ENSRNOG00000001148 Uniprot:P19945
Length = 317
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 136/270 (50%), Positives = 184/270 (68%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GL++Q V++NGS+YSPEVLD++E L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLA 270
>MGI|MGI:1927636 [details] [associations]
symbol:Rplp0 "ribosomal protein, large, P0" species:10090
"Mus musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0071353 "cellular response to interleukin-4" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
MGI:MGI:1927636 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0071353
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 OMA:AYMHAFN
EMBL:X15267 EMBL:AK010267 EMBL:AK012606 EMBL:AK029816 EMBL:AK081678
EMBL:BC003833 EMBL:BC011106 EMBL:BC011291 IPI:IPI00314950
PIR:S05305 RefSeq:NP_031501.1 UniGene:Mm.371545 UniGene:Mm.5286
ProteinModelPortal:P14869 SMR:P14869 IntAct:P14869 STRING:P14869
PhosphoSite:P14869 PaxDb:P14869 PRIDE:P14869
Ensembl:ENSMUST00000086519 GeneID:11837 KEGG:mmu:11837
InParanoid:P14869 NextBio:279771 Bgee:P14869 CleanEx:MM_RPLP0
Genevestigator:P14869 GermOnline:ENSMUSG00000067274 Uniprot:P14869
Length = 317
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 135/270 (50%), Positives = 183/270 (67%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GL++Q V++NGS+Y+PEVLD++E L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ TEY+FP +KVK +LA
Sbjct: 241 IINGYKRVLALSVETEYTFPLTEKVKAFLA 270
>UNIPROTKB|Q8NHW5 [details] [associations]
symbol:RPLP0P6 "60S acidic ribosomal protein P0-like"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428
Pfam:PF00466 GO:GO:0005737 EMBL:CH471053 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244
HOGENOM:HOG000210987 EMBL:AY064377 EMBL:CR596098 IPI:IPI00871646
ProteinModelPortal:Q8NHW5 SMR:Q8NHW5 IntAct:Q8NHW5
MINT:MINT-1143683 STRING:Q8NHW5 PhosphoSite:Q8NHW5 DMDM:74723863
PaxDb:Q8NHW5 PRIDE:Q8NHW5 GeneCards:GC02P038709 H-InvDB:HIX0029989
H-InvDB:HIX0161916 HGNC:HGNC:36404 HPA:HPA003512 neXtProt:NX_Q8NHW5
HOVERGEN:HBG000711 InParanoid:Q8NHW5 OrthoDB:EOG4VDQ10
PhylomeDB:Q8NHW5 ArrayExpress:Q8NHW5 Genevestigator:Q8NHW5
Uniprot:Q8NHW5
Length = 317
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 134/270 (49%), Positives = 180/270 (66%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P + GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD +E+ L +F V V ++ L YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+ VK +LA
Sbjct: 241 IINGYKRVLALSVETDYTFPLAENVKAFLA 270
>WB|WBGene00004408 [details] [associations]
symbol:rla-0 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0000003 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 eggNOG:COG0244 EMBL:Z79754 HOGENOM:HOG000210987
KO:K02941 PIR:T21351 RefSeq:NP_492766.1 ProteinModelPortal:Q93572
SMR:Q93572 DIP:DIP-26018N IntAct:Q93572 MINT:MINT-1046682
STRING:Q93572 World-2DPAGE:0011:Q93572 World-2DPAGE:0020:Q93572
PaxDb:Q93572 EnsemblMetazoa:F25H2.10.1 EnsemblMetazoa:F25H2.10.2
GeneID:172943 KEGG:cel:CELE_F25H2.10 UCSC:F25H2.10.1 CTD:172943
WormBase:F25H2.10 GeneTree:ENSGT00390000017839 InParanoid:Q93572
OMA:AYMHAFN NextBio:877621 Uniprot:Q93572
Length = 312
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 127/272 (46%), Positives = 187/272 (68%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
+V+ ++ K Y KL +L EEY + L+ DNVGS Q+Q IR+ +RG + +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
+++ +R H K N + L+P + NVG +FTK DL GAPA+ G +AP
Sbjct: 61 IRKALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAP 118
Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
DV +PP NTG+ P +TSFFQ L IPTKI +GT+EI+ V LI++GDKVG+SE+ALL L
Sbjct: 119 CDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNML 178
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAP 241
G+ PFSYGLVV+ VY++G++Y+PEVLD++ ++L ++F S V V +++LA++YPTLA+
Sbjct: 179 GVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVA 238
Query: 242 HMFVNAYKNVVAVALATEYSFPQADKVKEYLA 273
H N +N++ VA T+ SF +A+ +K ++A
Sbjct: 239 HSLANGLQNMLGVAAVTDVSFKEAETIKAFIA 270
>CGD|CAL0001932 [details] [associations]
symbol:RPP0 species:5476 "Candida albicans" [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0070180 "LSU rRNA binding" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 CGD:CAL0001932
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000024
GO:GO:0006414 eggNOG:COG0244 KO:K02941 RefSeq:XP_720309.1
RefSeq:XP_888730.1 STRING:Q5AFQ4 GeneID:3638023 GeneID:3704214
KEGG:cal:CaO19.7015 KEGG:cal:CaO19_7015 Uniprot:Q5AFQ4
Length = 312
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 126/265 (47%), Positives = 180/265 (67%)
Query: 9 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRM 68
EKK+ Y +KL +LLEEY I V DNV S Q+ IR+ LRGD+VVLMGKNTM++R IR
Sbjct: 6 EKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRG 65
Query: 69 HAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 128
+ F L+P ++GNVG IFT GDL APAR G VAP DV +P
Sbjct: 66 FLSELPE--FEKLLPFIKGNVGFIFTNGDLKSIRDIVVSNVVAAPARAGAVAPKDVWIPA 123
Query: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSY 188
GNTG++P +TSFFQ L +PTKI +GT+EI++ V+++ + KVG SEA LL L I PF+Y
Sbjct: 124 GNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTY 183
Query: 189 GLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAY 248
G+ V VY+NG V+ +LD+++D+L+ F S+++ + +++LA YPTL + H +N Y
Sbjct: 184 GMSVVQVYDNGQVFPSSILDITDDELISHFVSAINTIASISLAAGYPTLPSVGHSIINNY 243
Query: 249 KNVVAVALATEYSFPQADKVKEYLA 273
KNV+A+++AT+Y++ ++ VK+ LA
Sbjct: 244 KNVLALSVATDYTYEGSEAVKDRLA 268
>ASPGD|ASPL0000036346 [details] [associations]
symbol:AN2734 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0070180
"LSU rRNA binding" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 EMBL:BN001306
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN
EMBL:AACD01000048 RefSeq:XP_660338.1 STRING:Q5B9P6
EnsemblFungi:CADANIAT00010379 GeneID:2874227 KEGG:ani:AN2734.2
Uniprot:Q5B9P6
Length = 312
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 125/267 (46%), Positives = 182/267 (68%)
Query: 7 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTI 66
K+ K AY KL LL+EY + + DNV S Q+ IR LRG+ VVLMGKNTM++R +
Sbjct: 4 KSATKAAYFEKLKNLLDEYKTVFIVGVDNVSSQQMHEIRIALRGEGVVLMGKNTMVRRAL 63
Query: 67 RMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVV 126
+ N + L+P ++GNVG IFT GDL APAR G VAP DV +
Sbjct: 64 KGFIND--NPEYERLLPHVKGNVGFIFTNGDLKETKDKILSNRVAAPARAGAVAPADVWI 121
Query: 127 PPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPF 186
P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+ +G+KVG SEA LL L I PF
Sbjct: 122 PAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEEGNKVGPSEATLLNMLNISPF 181
Query: 187 SYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVN 246
+YG+ +Q VY++G +S VLD+ E+ L++ F+S+++ +T+++LA++YPTL + H VN
Sbjct: 182 TYGMTIQQVYQDGQTFSAAVLDIEEEQLLKVFSSAINTITSISLAVNYPTLPSVIHSVVN 241
Query: 247 AYKNVVAVALATEYSFPQADKVKEYLA 273
+YK V+AVA+ TEYS+P+ +++K+ +A
Sbjct: 242 SYKKVLAVAVETEYSWPEIEELKDRIA 268
>UNIPROTKB|F1NB66 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0005634 GO:GO:0042254 GO:GO:0022625
GeneTree:ENSGT00390000017839 OMA:AYMHAFN IPI:IPI00588222
EMBL:AADN02043198 EMBL:AADN02043197 Ensembl:ENSGALT00000011731
Uniprot:F1NB66
Length = 253
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 130/253 (51%), Positives = 171/253 (67%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + V ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP D
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD++E+ L ++F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHS 240
Query: 244 FVNAYKNVVAVAL 256
VN YK V+ VA+
Sbjct: 241 IVNGYKRVLGVAV 253
>UNIPROTKB|E2RLZ4 [details] [associations]
symbol:E2RLZ4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 GeneTree:ENSGT00390000017839 EMBL:AAEX03014742
Ensembl:ENSCAFT00000016673 OMA:GSIYNTE Uniprot:E2RLZ4
Length = 316
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 127/270 (47%), Positives = 178/270 (65%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR L ++VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLCRNAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLSEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +T FFQ L I TKI +GT+EI++ V+LI+ DK G+S+A LL L I
Sbjct: 121 VTVPALNTGLGPEKTFFFQALGITTKIFRGTIEILSYVQLIKTRDKAGASQATLLNILNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS GL++Q V++NGS+Y+ EVLD++E+ L +F V + ++ L I YPT+A+ PH
Sbjct: 181 SPFSSGLIIQQVFDNGSIYNTEVLDITEETLHSRFLEGVRNIASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYKNVVAVALATEYSFPQADKVKEYLA 273
+N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 241 IINGYKWVLALSVETDYTFPLAEKVKAFLA 270
>POMBASE|SPCC18.14c [details] [associations]
symbol:rpp0 "60S acidic ribosomal protein Rpp0
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002182
"cytoplasmic translational elongation" evidence=NAS] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=NAS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
PomBase:SPCC18.14c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0022626 GO:GO:0002182
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN
PIR:T41157 RefSeq:NP_588393.1 ProteinModelPortal:O74864 SMR:O74864
IntAct:O74864 STRING:O74864 PRIDE:O74864 EnsemblFungi:SPCC18.14c.1
GeneID:2538893 KEGG:spo:SPCC18.14c OrthoDB:EOG4Z39PT
NextBio:20800072 Uniprot:O74864
Length = 312
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 124/269 (46%), Positives = 174/269 (64%)
Query: 5 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKR 64
A E K Y KL L E+Y + V DNV S Q+ +R+ LRG + ++MGKNTM++R
Sbjct: 2 AISKESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRR 61
Query: 65 TIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDV 124
+R L+P+++GNVG +FT DL APAR +AP+DV
Sbjct: 62 AMRGIINDMPELE--RLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDV 119
Query: 125 VVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIR 184
VP GNTG++P +TSFFQ L IPTKI +GT+EI + V L+ K KVG SEA LL L I
Sbjct: 120 FVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNIS 179
Query: 185 PFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMF 244
PF+YG+ V ++Y+ G+V+SPE+LD+SE+DL+ S+ S++TA++L +YPT+ + H
Sbjct: 180 PFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSV 239
Query: 245 VNAYKNVVAVALATEYSFPQADKVKEYLA 273
VNAYKN+VAV+LATEY+F ++ K +LA
Sbjct: 240 VNAYKNLVAVSLATEYTFEGTEQTKAFLA 268
>UNIPROTKB|F8VU65 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01022636 ProteinModelPortal:F8VU65 SMR:F8VU65
Ensembl:ENST00000550856 ArrayExpress:F8VU65 Bgee:F8VU65
Uniprot:F8VU65
Length = 247
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 124/246 (50%), Positives = 165/246 (67%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 RPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHM 243
PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FVNAYK 249
+N YK
Sbjct: 241 IINGYK 246
>GENEDB_PFALCIPARUM|PF11_0313 [details] [associations]
symbol:PF11_0313 "ribosomal phosphoprotein P0"
species:5833 "Plasmodium falciparum" [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0003735 EMBL:AE014186 GO:GO:0006414 GO:GO:0022625
HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN ProtClustDB:PTZ00135
RefSeq:XP_001347984.1 ProteinModelPortal:Q8II61 IntAct:Q8II61
MINT:MINT-1569176 PRIDE:Q8II61 EnsemblProtists:PF11_0313:mRNA
GeneID:810860 KEGG:pfa:PF11_0313 EuPathDB:PlasmoDB:PF3D7_1130200
Uniprot:Q8II61
Length = 316
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 119/269 (44%), Positives = 183/269 (68%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
+ K SK +KK Y KL L+++Y++IL+ DNVGSNQ+ ++R+ LRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
++ ++ + + L+PL++ N+G +F K DL APAR+G++AP
Sbjct: 61 IRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAP 118
Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
IDV +PPG TG+DPS TSFFQ L I TKI KG +EI V LI++G+KV +S A LL K
Sbjct: 119 IDVFIPPGPTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKF 178
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAP 241
++PFSYG+ V++VY++G +Y +VLD++++D++EKF+ VS V AL+ A T A+ P
Sbjct: 179 NMKPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYP 238
Query: 242 HMFVNAYKNVVAVALATEYSFPQADKVKE 270
H+FV A+KN+VA+ + ++Y+FP + +K+
Sbjct: 239 HVFVEAFKNIVALIIDSDYTFPLMENIKK 267
>UNIPROTKB|Q8II61 [details] [associations]
symbol:PF11_0313 "60S ribosomal protein P0" species:36329
"Plasmodium falciparum 3D7" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0003735 EMBL:AE014186
GO:GO:0006414 GO:GO:0022625 HOGENOM:HOG000210987 KO:K02941
OMA:AYMHAFN ProtClustDB:PTZ00135 RefSeq:XP_001347984.1
ProteinModelPortal:Q8II61 IntAct:Q8II61 MINT:MINT-1569176
PRIDE:Q8II61 EnsemblProtists:PF11_0313:mRNA GeneID:810860
KEGG:pfa:PF11_0313 EuPathDB:PlasmoDB:PF3D7_1130200 Uniprot:Q8II61
Length = 316
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 119/269 (44%), Positives = 183/269 (68%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
+ K SK +KK Y KL L+++Y++IL+ DNVGSNQ+ ++R+ LRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
++ ++ + + L+PL++ N+G +F K DL APAR+G++AP
Sbjct: 61 IRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAP 118
Query: 122 IDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
IDV +PPG TG+DPS TSFFQ L I TKI KG +EI V LI++G+KV +S A LL K
Sbjct: 119 IDVFIPPGPTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKF 178
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAP 241
++PFSYG+ V++VY++G +Y +VLD++++D++EKF+ VS V AL+ A T A+ P
Sbjct: 179 NMKPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYP 238
Query: 242 HMFVNAYKNVVAVALATEYSFPQADKVKE 270
H+FV A+KN+VA+ + ++Y+FP + +K+
Sbjct: 239 HVFVEAFKNIVALIIDSDYTFPLMENIKK 267
>UNIPROTKB|F8VW21 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021320 ProteinModelPortal:F8VW21 SMR:F8VW21
Ensembl:ENST00000547211 ArrayExpress:F8VW21 Bgee:F8VW21
Uniprot:F8VW21
Length = 244
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 118/228 (51%), Positives = 159/228 (69%)
Query: 40 QLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLX 99
Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL
Sbjct: 19 QMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLT 76
Query: 100 XXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++
Sbjct: 77 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 136
Query: 160 PVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFA 219
V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F
Sbjct: 137 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFL 196
Query: 220 SSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADK 267
V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+K
Sbjct: 197 EGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEK 244
>UNIPROTKB|F1M2B8 [details] [associations]
symbol:F1M2B8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 IPI:IPI00951976
Ensembl:ENSRNOT00000041352 Uniprot:F1M2B8
Length = 297
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 127/263 (48%), Positives = 172/263 (65%)
Query: 11 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHA 70
K Y K+ QLL++Y + + ADNVGS Q+Q IR LR +VVLMGKNTMM++ IR H
Sbjct: 10 KSNYFLKIIQLLDDYPKGFIVGADNVGSKQMQQIRMSLREKAVVLMGKNTMMRKAIRGHL 69
Query: 71 EKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGN 130
E N A L+P ++GNVG +FTK DL A AR G + P +V VP N
Sbjct: 70 EN--NRALKKLLPHIRGNVGFMFTKEDLEIRDMMLANKVPVA-ARAGAITPCEVTVPAQN 126
Query: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGL 190
TGL P + L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL+ L I PFS+GL
Sbjct: 127 TGLGPEKA-----LGITTKISRGTIEILSDVQLIKTGDKVGASEATLLSMLNISPFSFGL 181
Query: 191 VVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKN 250
++Q V++NGS+YSPEVLD +E L +F V V + L I YPT+A+ PH +N YK
Sbjct: 182 IIQQVFDNGSIYSPEVLD-TEQALHSRFLEGVCNVAGVCLQIGYPTVASVPHSIINGYKR 240
Query: 251 VVAVALATEYSFPQADKVKEYLA 273
V+A+++ T+Y+F A+KVK +LA
Sbjct: 241 VLALSVETDYTFSVAEKVKAFLA 263
>SGD|S000004332 [details] [associations]
symbol:RPP0 "Conserved ribosomal protein P0 of the ribosomal
stalk" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IDA]
[GO:0070180 "LSU rRNA binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 SGD:S000004332 EMBL:BK006945
GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A GO:GO:0030686
GO:GO:0000027 EMBL:U19028 PDB:3J16 PDBsum:3J16 GO:GO:0006414
GO:GO:0022625 eggNOG:COG0244 GO:GO:0070180 PDB:3IZS PDB:3O5H
PDB:3U5I PDBsum:3IZS PDBsum:3O5H PDBsum:3U5I HOGENOM:HOG000210987
KO:K02941 GeneTree:ENSGT00390000017839 OrthoDB:EOG4Z39PT
EMBL:X06959 EMBL:D00529 EMBL:X13328 EMBL:M26506 EMBL:M37326
PIR:S51343 RefSeq:NP_013444.1 ProteinModelPortal:P05317 SMR:P05317
DIP:DIP-1582N IntAct:P05317 MINT:MINT-384116 STRING:P05317
SWISS-2DPAGE:P05317 PaxDb:P05317 PeptideAtlas:P05317
EnsemblFungi:YLR340W GeneID:851052 KEGG:sce:YLR340W OMA:PILSTFG
NextBio:967667 Genevestigator:P05317 GermOnline:YLR340W
Uniprot:P05317
Length = 312
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 118/258 (45%), Positives = 169/258 (65%)
Query: 9 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRM 68
EKK Y AKL + LEEY + V DNV S Q+ +R+ LRG +VVLMGKNTM++R IR
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 69 HAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 128
+ F L+P ++GNVG +FT L APAR G VAP D+ V
Sbjct: 66 FLSDLPD--FEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRA 123
Query: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSY 188
NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G+KVG SEA+LL L I PF++
Sbjct: 124 VNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTF 183
Query: 189 GLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAY 248
GL V VY+NG V+ +LD+++++LV F S+VS + +++LAI YPTL + H +N Y
Sbjct: 184 GLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNY 243
Query: 249 KNVVAVALATEYSFPQAD 266
K+++AVA+A Y +P+ +
Sbjct: 244 KDLLAVAIAASYHYPEIE 261
>DICTYBASE|DDB_G0286501 [details] [associations]
symbol:rplP0 "60S acidic ribosomal protein P0"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 dictyBase:DDB_G0286501
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0042254 GO:GO:0005840
EMBL:AAFI02000087 GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244
KO:K02941 OMA:AYMHAFN EMBL:X56194 PIR:S14012 RefSeq:XP_637692.1
STRING:P22685 EnsemblProtists:DDB0219977 GeneID:8625658
KEGG:ddi:DDB_G0286501 ProtClustDB:PTZ00135 Uniprot:P22685
Length = 305
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 115/275 (41%), Positives = 171/275 (62%)
Query: 8 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIR 67
+++K + K +L Y +++VA AD VGS+QLQ IR+ +RG VLMGK TM+++ IR
Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65
Query: 68 MHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 127
A+ LN L+ N +IF K ++ GAPA+ G+ AP DV++P
Sbjct: 66 DLADSKPELDALNTY--LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIP 123
Query: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFS 187
G TG++P+QTSF Q L I TKIN+G ++I+ V +I+ G KVG+SEA LL KL I+PF+
Sbjct: 124 AGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFT 183
Query: 188 YGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNA 247
YGL + +Y+ G+ YSP + SE+DL+ KF + + A++L I YPT+A+ PH +NA
Sbjct: 184 YGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNA 240
Query: 248 YKNVVAVALATEYSFPQADKVKEYLAVCISCTFPS 282
+KN++A++ T Y+F A+K K A PS
Sbjct: 241 FKNLLAISFETSYTFDAAEKFKSAAAAAPVAAAPS 275
>RGD|1564469 [details] [associations]
symbol:RGD1564469 "similar to Acidic ribosomal phosphoprotein
P0" species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 RGD:1564469 GO:GO:0042254
GO:GO:0005840 OrthoDB:EOG4VDQ10 GeneTree:ENSGT00390000017839
IPI:IPI00368902 Ensembl:ENSRNOT00000040909 Uniprot:D3ZJT4
Length = 298
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 119/266 (44%), Positives = 165/266 (62%)
Query: 11 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGK---NTMMKRTIR 67
K Y K+ QLL++Y + + ADNV S Q+Q IR L+G +VVLM K N MM++ IR
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIMGADNVSSKQMQQIRMSLQGKAVVLMKKKRKNAMMRKAIR 69
Query: 68 MHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 127
H EK N A L P +GNVG +FTK DL A + G +AP +V
Sbjct: 70 EHLEK--NRALEKLPPHTRGNVGFMFTKEDLTEIRDMLLTNKVPAATQAGALAPCEVTAH 127
Query: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFS 187
NTGL P +TSFFQVL I TKI++G +EI++ V+LI+ G+KVG+ EA LL I P
Sbjct: 128 AQNTGLGPEKTSFFQVLGINTKISRGIIEILSDVQLIKTGNKVGAGEATLL---NISPSV 184
Query: 188 YGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNA 247
GL+++ V++NGS+Y+PEVLD++E L F V V A+ L I PT+ + PH +N
Sbjct: 185 SGLIIRQVFDNGSIYNPEVLDITEQILRSHFLEGVRNVAAVCLQIGEPTVTSVPHSIING 244
Query: 248 YKNVVAVALATEYSFPQADKVKEYLA 273
K V+A+++ T+Y+FP A+KVK +LA
Sbjct: 245 SKRVLALSVETDYTFPLAEKVKAFLA 270
>UNIPROTKB|F8VZS0 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0
IPI:IPI01022462 ProteinModelPortal:F8VZS0 SMR:F8VZS0
Ensembl:ENST00000546990 ArrayExpress:F8VZS0 Bgee:F8VZS0
Uniprot:F8VZS0
Length = 246
Score = 330 (121.2 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 60/113 (53%), Positives = 86/113 (76%)
Query: 161 VELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFAS 220
V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F
Sbjct: 109 VQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLE 168
Query: 221 SVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 273
V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 169 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 221
Score = 232 (86.7 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 48/95 (50%), Positives = 63/95 (66%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDL 98
+ IR H E N A L+P ++GNVG +FTK DL
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDL 95
>UNIPROTKB|Q3B7A4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005737 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HOGENOM:HOG000210987 HOVERGEN:HBG000711
UniGene:Hs.546285 HGNC:HGNC:10371 ChiTaRS:RPLP0 EMBL:BC107717
IPI:IPI00556485 SMR:Q3B7A4 STRING:Q3B7A4 Ensembl:ENST00000313104
UCSC:uc001txr.3 Uniprot:Q3B7A4
Length = 255
Score = 367 (134.2 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 76/155 (49%), Positives = 98/155 (63%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEII 158
V VP NTGL P +TSFFQ L I TKI++GT+EI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 141 (54.7 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 222 VSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 273
V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 157 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 208
>UNIPROTKB|J9P5Q4 [details] [associations]
symbol:J9P5Q4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 GeneTree:ENSGT00390000017839 EMBL:AAEX03007598
Ensembl:ENSCAFT00000048593 OMA:EESVESC Uniprot:J9P5Q4
Length = 267
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 90/186 (48%), Positives = 122/186 (65%)
Query: 88 NVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIP 147
NVG +FTK DL A AR G +AP + VP NTGL +TSFFQ L I
Sbjct: 35 NVGFVFTKEDLTEMRDMLLADKVPAAARAGAIAPCEDTVPAQNTGLGAKRTSFFQALGIT 94
Query: 148 TKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVL 207
TKI++GT EI+ V+LI+ DKVG+SEA LL L I PFS+GL+VQ V++NGS+ +PEVL
Sbjct: 95 TKISRGTTEILNDVQLIKARDKVGASEATLLNMLNIPPFSFGLIVQQVFDNGSICTPEVL 154
Query: 208 DLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADK 267
D++E+ L F V V ++ L + YPT+A+ PH +N YK A+++ T+Y+FP A+K
Sbjct: 155 DITEETLQSCFLEGVRSVASVCLQVGYPTVASVPHPIINGYKRGPALSVETDYTFPLAEK 214
Query: 268 VKEYLA 273
VK +LA
Sbjct: 215 VKAFLA 220
>UNIPROTKB|F1LWD6 [details] [associations]
symbol:F1LWD6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00390000017839 IPI:IPI00561389
Ensembl:ENSRNOT00000047989 Uniprot:F1LWD6
Length = 301
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 102/263 (38%), Positives = 151/263 (57%)
Query: 11 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHA 70
K+ Y L +LL++Y + + ADNVGS Q+ ++ +G RG +MGK+TMM + IR +
Sbjct: 10 KLNYYLVLSKLLDDYPKFFIVGADNVGSKQM-HLSKGRRG----VMGKSTMMHKAIRGYL 64
Query: 71 EKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGN 130
E N A L+P +GNV FT DL A A G +A +V N
Sbjct: 65 EN--NPALEKLLPHFRGNVSFAFTTEDLTEIRAMLLTSKVPAAALAGAIASCEVTAHAQN 122
Query: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGL 190
TGL P +TSFFQ I TKI++ T+EI++ V+LI+ GDKVG+SE A P S
Sbjct: 123 TGLAPEKTSFFQASGITTKISRVTIEILSDVQLIKPGDKVGASEHAE------HPLS--- 173
Query: 191 VVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKN 250
+ V++NGS+Y+P++LD++ L F V +T + L + Y T+A PH ++ YK
Sbjct: 174 PLGGVFDNGSIYNPDMLDITNQILHSHFLEGVCNMTRVCLQVGYSTVATGPHSIISGYKQ 233
Query: 251 VVAVALATEYSFPQADKVKEYLA 273
V+ +A+ T+Y+FP A+KV+ LA
Sbjct: 234 VL-LAVETDYTFPLAEKVEASLA 255
>UNIPROTKB|F8VPE8 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01022043 ProteinModelPortal:F8VPE8 SMR:F8VPE8
Ensembl:ENST00000547191 ArrayExpress:F8VPE8 Bgee:F8VPE8
Uniprot:F8VPE8
Length = 153
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 79/151 (52%), Positives = 101/151 (66%)
Query: 20 QLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFL 79
QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A
Sbjct: 5 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALE 62
Query: 80 NLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTS 139
L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TS
Sbjct: 63 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTS 122
Query: 140 FFQVLNIPTKINKGTVEIITPVELIRKGDKV 170
FFQ L I TKI++GT+EI++ V+LI+ GDKV
Sbjct: 123 FFQALGITTKISRGTIEILSDVQLIKTGDKV 153
>UNIPROTKB|F8VWS0 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005737 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0
IPI:IPI01022174 ProteinModelPortal:F8VWS0 SMR:F8VWS0 PRIDE:F8VWS0
Ensembl:ENST00000546989 ArrayExpress:F8VWS0 Bgee:F8VWS0
Uniprot:F8VWS0
Length = 281
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 76/155 (49%), Positives = 98/155 (63%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEII 158
V VP NTGL P +TSFFQ L I TKI++GT+EI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 49/132 (37%), Positives = 78/132 (59%)
Query: 146 IPTKINKGTV---EIITPVELIRKGDKVGSSEAALLAKLGIRP-FSYGLVVQSVYENGSV 201
+P G + E+ P + G +G + + LGI S G + V++NGS+
Sbjct: 107 VPAAARAGAIAPCEVTVPAQ--NTG--LGPEKTSFFQALGITTKISRGTIEILVFDNGSI 162
Query: 202 YSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYS 261
Y+PEVLD++E+ L +F V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+
Sbjct: 163 YNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 222
Query: 262 FPQADKVKEYLA 273
FP A+KVK +LA
Sbjct: 223 FPLAEKVKAFLA 234
>UNIPROTKB|G3V210 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
EMBL:CH471054 GO:GO:0042254 GO:GO:0005840 EMBL:AC004263
UniGene:Hs.546285 HGNC:HGNC:10371 ChiTaRS:RPLP0
ProteinModelPortal:G3V210 SMR:G3V210 PRIDE:G3V210
Ensembl:ENST00000547173 ArrayExpress:G3V210 Bgee:G3V210
Uniprot:G3V210
Length = 166
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 76/155 (49%), Positives = 98/155 (63%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEII 158
V VP NTGL P +TSFFQ L I TKI++GT+EI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>UNIPROTKB|F8VRK7 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021139 ProteinModelPortal:F8VRK7 SMR:F8VRK7
PRIDE:F8VRK7 Ensembl:ENST00000551258 ArrayExpress:F8VRK7
Bgee:F8VRK7 Uniprot:F8VRK7
Length = 156
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 71/149 (47%), Positives = 90/149 (60%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNI--PTKI 150
V VP NTGL P +TSFFQ L + PT I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGVYCPTII 149
>UNIPROTKB|F8VQY6 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021889 ProteinModelPortal:F8VQY6 SMR:F8VQY6
Ensembl:ENST00000547475 ArrayExpress:F8VQY6 Bgee:F8VQY6
Uniprot:F8VQY6
Length = 142
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 68/141 (48%), Positives = 86/141 (60%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVL 144
V VP NTGL P +TSFFQ L
Sbjct: 121 VTVPAQNTGLGPEKTSFFQAL 141
>UNIPROTKB|F8VWV4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01023074 ProteinModelPortal:F8VWV4 SMR:F8VWV4
Ensembl:ENST00000550423 ArrayExpress:F8VWV4 Bgee:F8VWV4
Uniprot:F8VWV4
Length = 111
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 53/108 (49%), Positives = 67/108 (62%)
Query: 20 QLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFL 79
QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A
Sbjct: 5 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALE 62
Query: 80 NLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 127
L+P ++GNVG +FTK DL A AR G +AP +V VP
Sbjct: 63 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 110
>UNIPROTKB|F1LXL8 [details] [associations]
symbol:F1LXL8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 IPI:IPI00950373 Ensembl:ENSRNOT00000066180
Uniprot:F1LXL8
Length = 151
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 49/107 (45%), Positives = 74/107 (69%)
Query: 167 GDKVGSSEAALLAKLGIRPFSYGLVVQSVYEN-GSVYSPEVLDLSEDDLVEKFASSVSMV 225
G++VG+SEA LL L I FS+GL++Q V++N GS+Y+PEVL ++E F + V
Sbjct: 3 GNQVGASEATLLYMLNISTFSFGLIIQQVFDNNGSIYNPEVLHITEQTPYSCFLERIHNV 62
Query: 226 TALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYL 272
+++L I YPT+A+ PH +N YK V+A+ + TEY+ P A+KVK +L
Sbjct: 63 ASVSLQIGYPTVASVPHSIINGYKWVLALTVDTEYTSPLAEKVKAFL 109
>UNIPROTKB|F8VS58 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 EMBL:AC004263
HGNC:HGNC:10371 ChiTaRS:RPLP0 IPI:IPI01020986
ProteinModelPortal:F8VS58 SMR:F8VS58 Ensembl:ENST00000551914
ArrayExpress:F8VS58 Bgee:F8VS58 Uniprot:F8VS58
Length = 121
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 48/95 (50%), Positives = 63/95 (66%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
+ +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDL 98
+ IR H E N A L+P ++GNVG +FTK DL
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDL 95
>UNIPROTKB|G4MVM1 [details] [associations]
symbol:MGG_08908 "mRNA turnover protein 4" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 EMBL:CM001232 KO:K14815 RefSeq:XP_003713937.1
EnsemblFungi:MGG_08908T0 GeneID:2679894 KEGG:mgr:MGG_08908
Uniprot:G4MVM1
Length = 251
Score = 167 (63.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 49/167 (29%), Positives = 77/167 (46%)
Query: 2 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTM 61
V K ++ +K++ + + + + +Y + V + DN+ +N L+++RR L GDS + GK +
Sbjct: 15 VAKKTREQKELLF-TNIRECVPQYQHLFVFSVDNMRNNNLKDVRRELSGDSRMFFGKTKL 73
Query: 62 MKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAP 121
M R + AE L L G VGLIFT AR G VAP
Sbjct: 74 MARALGQTAEDEQAEGLHKLTSHLAGTVGLIFTNRPASELLSYLDSITSVDFARAGAVAP 133
Query: 122 IDVVVPPG---NTGLD-PSQTSF---------FQVLNIPTKINKGTV 155
D +PPG +TG + P + + L +PT++ KG V
Sbjct: 134 RDFSIPPGVVYSTGGEVPQEYDVPLAHSIEPELRKLGVPTRLIKGRV 180
>UNIPROTKB|F8W1K8 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0 IPI:IPI01021777
ProteinModelPortal:F8W1K8 SMR:F8W1K8 PRIDE:F8W1K8
Ensembl:ENST00000552292 ArrayExpress:F8W1K8 Bgee:F8W1K8
Uniprot:F8W1K8
Length = 107
Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 222 VSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 273
V V ++ L I YPT+A+ PH +N YK V+A+++ T+Y+FP A+KVK +LA
Sbjct: 9 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLA 60
>SGD|S000001492 [details] [associations]
symbol:MRT4 "Protein involved in mRNA turnover and ribosome
assembly" species:4932 "Saccharomyces cerevisiae" [GO:0042273
"ribosomal large subunit biogenesis" evidence=IMP;IPI] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0070180 "LSU rRNA binding"
evidence=ISA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005622 "intracellular" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 SGD:S000001492 GO:GO:0005654 GO:GO:0005730
EMBL:BK006944 GO:GO:0030687 GO:GO:0000956 EMBL:S53418 GO:GO:0006364
GO:GO:0000027 EMBL:X61398 EMBL:S59773 eggNOG:COG0244
GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263 KO:K14815
OMA:AWKHSRF OrthoDB:EOG4KH643 EMBL:Z28009 PIR:S30013
RefSeq:NP_012916.1 ProteinModelPortal:P33201 SMR:P33201
DIP:DIP-5283N IntAct:P33201 MINT:MINT-573561 STRING:P33201
PaxDb:P33201 PeptideAtlas:P33201 EnsemblFungi:YKL009W GeneID:853860
KEGG:sce:YKL009W CYGD:YKL009w NextBio:975109 Genevestigator:P33201
GermOnline:YKL009W GO:GO:0070180 Uniprot:P33201
Length = 236
Score = 150 (57.9 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 53/214 (24%), Positives = 94/214 (43%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K + K+ +D ++ + L+ Y + V D+V + LQ IR G S ++MGK +++
Sbjct: 17 KKGRENKERIFD-EVREALDTYRYVWVLHLDDVRTPVLQEIRTSWAG-SKLIMGKRKVLQ 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ + E+ L L G GL+FT D+ +R AP+
Sbjct: 75 KALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSRPNTKAPLT 134
Query: 124 VVVPPG---NTG--------------LDPSQTSFFQVLNIPTKINKGTVEIITPVELIRK 166
+P G + G L+P+ + F+ IPTKI G + I +P + +
Sbjct: 135 FTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFE---IPTKIKAGKITIDSPYLVCTE 191
Query: 167 GDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGS 200
G+K+ +A +L + GI + + V + Y+N S
Sbjct: 192 GEKLDVRQALILKQFGIAASEFKVKVSAYYDNDS 225
>ZFIN|ZDB-GENE-050417-142 [details] [associations]
symbol:mrto4 "mRNA turnover 4 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466
ZFIN:ZDB-GENE-050417-142 GO:GO:0042254 GO:GO:0005840 CTD:51154
eggNOG:COG0244 HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815
OrthoDB:EOG41C6X4 EMBL:BC092913 IPI:IPI00512586
RefSeq:NP_001017657.1 UniGene:Dr.105236 STRING:Q568C9 GeneID:550350
KEGG:dre:550350 InParanoid:Q568C9 NextBio:20879605
ArrayExpress:Q568C9 Uniprot:Q568C9
Length = 242
Score = 145 (56.1 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 49/211 (23%), Positives = 90/211 (42%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K +A++ + + + C + Y + V + +N+ +N+L++IR R S GKN +M
Sbjct: 18 KGLEAKQNLIEELRKCA--DIYRYVFVFSVENMRNNKLKDIRTAWR-HSRFFFGKNKVMM 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ L L+G VG++FT AR G A +
Sbjct: 75 IALGKGPTDEYKDNLHKLSRFLRGEVGVLFTNKTKDEVQEYFGNFKEVDYARAGNTASMA 134
Query: 124 VVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182
V + G P S + L +PT + KG V +I E+ ++GD + +A +L G
Sbjct: 135 VTLDEGPLDQFPHSMEPQLRQLGLPTALKKGAVTLIKDFEVCKEGDTLTPEQARILKLFG 194
Query: 183 IRPFSYGLVVQSVYENGSVYSPEVLDLSEDD 213
+ L ++ ++ + S ++ D +DD
Sbjct: 195 FEMAEFKLSIKCMWNSESGEFEKLTDGDDDD 225
>UNIPROTKB|F1M7E2 [details] [associations]
symbol:F1M7E2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 IPI:IPI00391041 Ensembl:ENSRNOT00000037986
Uniprot:F1M7E2
Length = 127
Score = 128 (50.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 189 GLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISY-PTLAAAPHMFVNA 247
G++++ V+ NGS+Y+PEVLD+S D +F V + ++ L+ + P ++
Sbjct: 1 GILIKEVFHNGSLYNPEVLDISADSHF-RFLEGVRHIASVPLSADWLPDCCFRGTLYRQW 59
Query: 248 YKNVVAVALATEYSFPQADKVKEYLA 273
+ A ++ TEY+FP A+KVK +LA
Sbjct: 60 IQVDPAWSVETEYTFPLAEKVKAFLA 85
>FB|FBgn0033485 [details] [associations]
symbol:RpLP0-like "Ribosomal protein LP0-like" species:7227
"Drosophila melanogaster" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006412 "translation" evidence=IC] [GO:0003735
"structural constituent of ribosome" evidence=IC] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR001790 Pfam:PF00466 EMBL:AE013599 GO:GO:0042254
GO:GO:0005840 eggNOG:COG0244 GeneTree:ENSGT00390000006238 KO:K14815
OMA:AWKHSRF EMBL:AY061517 RefSeq:NP_610554.1 UniGene:Dm.12545
SMR:Q7K1Q7 IntAct:Q7K1Q7 STRING:Q7K1Q7 EnsemblMetazoa:FBtr0088425
GeneID:36058 KEGG:dme:Dmel_CG1381 UCSC:CG1381-RA CTD:36058
FlyBase:FBgn0033485 InParanoid:Q7K1Q7 OrthoDB:EOG44TMQV
GenomeRNAi:36058 NextBio:796627 Uniprot:Q7K1Q7
Length = 256
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 9 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTI-R 67
+++I D + C + +Y I V N+ ++ L+++R+ L+ +S + GKN +M+ + R
Sbjct: 23 KQRIVDDIRFC--VGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGR 80
Query: 68 MHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 127
+E+ L L G VGL+FT AR G VA V +P
Sbjct: 81 TKSEEV-EPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLP 139
Query: 128 PGNT-GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPF 186
G S + L +PTK+ KG V + + + +G KV + E A + KL +P
Sbjct: 140 AGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG-KVLTPEQARILKLVGKPM 198
Query: 187 S-YGLVVQSVYENGSVYSPEVLDLSEDD 213
+ + L ++ + + V D D+
Sbjct: 199 AKFRLTMKCSWTKSEGFQLHVEDDVNDE 226
>UNIPROTKB|F1P353 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0005730 GO:GO:0031965 GO:GO:0042254
GO:GO:0005840 EMBL:AADN02040697 GeneTree:ENSGT00390000006238
OMA:AWKHSRF IPI:IPI00587586 Ensembl:ENSGALT00000006360
Uniprot:F1P353
Length = 249
Score = 135 (52.6 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 47/210 (22%), Positives = 91/210 (43%)
Query: 9 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRM 68
E K A A+L + ++ Y I + + N+ +N+L+++R + S + GKN +M +
Sbjct: 28 EAKQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGR 86
Query: 69 HAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 128
+ L+G VGL+FT AR G A V +
Sbjct: 87 EPSSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDT 146
Query: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFS 187
G P S + L +PT + KG V +++ E+ ++GD + +A +L G
Sbjct: 147 GPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDILTPEQARVLKLFGYEMAE 206
Query: 188 YGLVVQSVYENGSVYSPEVLDLSEDDLVEK 217
+ + ++ ++ + + +++ ED+ EK
Sbjct: 207 FKVTIKFLWNSETGDFQKLVGDEEDEEDEK 236
>TAIR|locus:2032970 [details] [associations]
symbol:AT1G25260 "AT1G25260" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002684 GO:GO:0042254 GO:GO:0022626 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF EMBL:AY045969 EMBL:AY079322 EMBL:AY088374
IPI:IPI00529475 RefSeq:NP_564226.1 UniGene:At.21571
ProteinModelPortal:Q94AK8 IntAct:Q94AK8 STRING:Q94AK8 PRIDE:Q94AK8
EnsemblPlants:AT1G25260.1 GeneID:839109 KEGG:ath:AT1G25260
TAIR:At1g25260 InParanoid:Q94AK8 PhylomeDB:Q94AK8
ProtClustDB:CLSN2687949 ArrayExpress:Q94AK8 Genevestigator:Q94AK8
Uniprot:Q94AK8
Length = 235
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 47/221 (21%), Positives = 95/221 (42%)
Query: 3 VKASKAEKKIAYDAKLC------QLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLM 56
V SK +KK + K C + +E+Y+ + V + +N+ + + + R+ R + +
Sbjct: 10 VTLSKTKKK-GREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFL 68
Query: 57 GKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARV 116
G N +M+ + AE + + LL+G+ GL+ T +R
Sbjct: 69 GSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAYEDSDFSRT 128
Query: 117 GLVAPIDVVVPPGNTG-LDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEA 175
G +A V + G + L +P ++NKGTVE++ + +G ++ A
Sbjct: 129 GSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSA 188
Query: 176 ALLAKLGIR--PFSYGLVVQSVYENGSVYSPEVLDLSEDDL 214
+L L ++ F L+ + + +Y ++ +L +DL
Sbjct: 189 HILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDL 229
>POMBASE|SPBC11G11.03 [details] [associations]
symbol:mrt4 "mRNA turnover and ribosome assembly
protein Mrt4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000027 "ribosomal large subunit assembly" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0006402 "mRNA catabolic
process" evidence=ISO] InterPro:IPR001790 Pfam:PF00466
PomBase:SPBC11G11.03 GO:GO:0005730 EMBL:CU329671 GO:GO:0006402
GO:GO:0006364 GO:GO:0000027 eggNOG:COG0244 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF PIR:T39330 RefSeq:NP_595721.1 STRING:Q9USZ6
EnsemblFungi:SPBC11G11.03.1 GeneID:2539913 KEGG:spo:SPBC11G11.03
OrthoDB:EOG4KH643 NextBio:20801056 Uniprot:Q9USZ6
Length = 241
Score = 132 (51.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 53/198 (26%), Positives = 80/198 (40%)
Query: 9 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRM 68
E K A + + Q L+ + + + N+ + L+ IR +G S + MGK +M + +
Sbjct: 21 EGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGH 79
Query: 69 HAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPP 128
E+ L LL G VGL+FT AR G VAP V+P
Sbjct: 80 TPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESFVQNDFARAGAVAPFTHVIPA 139
Query: 129 G----NTGLDPSQTSFF-------QV--LNIPTKINKGTVEIITPVELIRKGDKVGSSEA 175
G G P + QV L +PT + G V ++ L +G ++ S +
Sbjct: 140 GPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSRQT 199
Query: 176 ALLAKLGIRP--FSYGLV 191
LL GI F GL+
Sbjct: 200 RLLKLFGITAAEFKVGLL 217
>MGI|MGI:1917152 [details] [associations]
symbol:Mrto4 "MRT4, mRNA turnover 4, homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 MGI:MGI:1917152 GO:GO:0005730 GO:GO:0031965
GO:GO:0042254 CTD:51154 eggNOG:COG0244 GeneTree:ENSGT00390000006238
HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 EMBL:AK011387 EMBL:BC005734 IPI:IPI00132578
RefSeq:NP_076025.1 UniGene:Mm.27871 UniGene:Mm.296860
UniGene:Mm.441201 ProteinModelPortal:Q9D0I8 SMR:Q9D0I8
STRING:Q9D0I8 PhosphoSite:Q9D0I8 PaxDb:Q9D0I8 PRIDE:Q9D0I8
Ensembl:ENSMUST00000102503 GeneID:69902 KEGG:mmu:69902
InParanoid:Q9D0I8 NextBio:330573 Bgee:Q9D0I8 CleanEx:MM_MRTO4
Genevestigator:Q9D0I8 GermOnline:ENSMUSG00000028741 Uniprot:Q9D0I8
Length = 239
Score = 130 (50.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/219 (21%), Positives = 95/219 (43%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K + ++ + + + C ++ Y + + + N+ +++L++IR + S + GKN +M
Sbjct: 18 KGLELKQNLIEELRKC--VDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMM 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ + L+G VGL+FT AR G A +
Sbjct: 75 VALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLT 134
Query: 124 VVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182
V + PG P S + L +PT + KG V +++ E+ ++GD + +A +L G
Sbjct: 135 VSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARILKLFG 194
Query: 183 IRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASS 221
+ ++++ +++ S ++ +DDL E S
Sbjct: 195 YEMAEFKVIIKYMWDAQSGRFQQM----DDDLPESAPES 229
>ASPGD|ASPL0000002010 [details] [associations]
symbol:AN6902 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840
EMBL:BN001301 EMBL:AACD01000113 eggNOG:COG0244 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF OrthoDB:EOG4KH643 RefSeq:XP_664506.1
STRING:Q5AXS8 EnsemblFungi:CADANIAT00007704 GeneID:2870607
KEGG:ani:AN6902.2 Uniprot:Q5AXS8
Length = 246
Score = 130 (50.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K+ K + + Y A + + +E+Y + V + DN+ + L+++R DS + GK +M
Sbjct: 18 KSHKEQTRRLY-ANIRECVEKYDHLFVFSVDNMRNTYLKDVRTEF-ADSRLFFGKTKVMA 75
Query: 64 RTIRMHAEKTGNTAFLNLI-PLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPI 122
+ H +T L+L+ P L G VGL+FT D AR G A
Sbjct: 76 VALG-HNPETEAAENLHLLTPYLTGAVGLLFTSRDPASVTDYFDAFRPLDFARAGTEATR 134
Query: 123 DVVVPPG----NTGLDP-------SQT--SFFQVLNIPTKINKGTV--EIITPVE---LI 164
+P G G P S T + L +PT++ KG V E+ E +
Sbjct: 135 SFSIPAGLVYSRAGEIPTSEDEPVSHTIEPELRKLGVPTRLVKGKVMLELTDGQEGYPVC 194
Query: 165 RKGDKVGSSEAALLAKLGIRP--FSYGLVVQSVYENGSVYSPEVLDLSEDDL 214
+KG+ + S + LL G++ F GL G V E+L+ +E+++
Sbjct: 195 KKGEILDSRQTTLLKMFGVQTSEFRVGLKAHWARATGKV---EILEKNENEM 243
>CGD|CAL0006176 [details] [associations]
symbol:MRT4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030687 "preribosome,
large subunit precursor" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
CGD:CAL0006176 GO:GO:0042254 GO:GO:0005840 GO:GO:0035690
EMBL:AACQ01000034 EMBL:AACQ01000033 eggNOG:COG0244
HOGENOM:HOG000177263 KO:K14815 RefSeq:XP_719113.1
RefSeq:XP_719230.1 STRING:Q5AC00 GeneID:3639102 GeneID:3639219
KEGG:cal:CaO19.12996 KEGG:cal:CaO19.5550 Uniprot:Q5AC00
Length = 230
Score = 127 (49.8 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K K K +D ++ L+ + I V D++ + LQ++R G ++L GK +++
Sbjct: 17 KKGKENKTRLFD-EVRSALDTFKYIWVLQFDDIRTPVLQDVRNDWVGSKLIL-GKRKVLQ 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ + E+ L L +G GL+FT +R APID
Sbjct: 75 KALGETIEEEYKDNLHQLSKLCEGLPGLLFTDESPETVEAYFKAYSKQDYSRAKSRAPID 134
Query: 124 VVVPPG---NTG----LD---PSQTSFFQVLN----IPTKINKGTVEIITPVELIRKGDK 169
+P G + G ++ P S + L +PTKI G + + P + KGD
Sbjct: 135 FTIPAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKIILEEPYVVCNKGDV 194
Query: 170 VGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 202
+ + +A LL + G+ + + + Y+ G V+
Sbjct: 195 LDTRQALLLKQFGVAASEFKIPILGYYD-GEVH 226
>UNIPROTKB|Q5AC00 [details] [associations]
symbol:MRT4 "Potential rRNA processing factor"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR001790 Pfam:PF00466 CGD:CAL0006176
GO:GO:0042254 GO:GO:0005840 GO:GO:0035690 EMBL:AACQ01000034
EMBL:AACQ01000033 eggNOG:COG0244 HOGENOM:HOG000177263 KO:K14815
RefSeq:XP_719113.1 RefSeq:XP_719230.1 STRING:Q5AC00 GeneID:3639102
GeneID:3639219 KEGG:cal:CaO19.12996 KEGG:cal:CaO19.5550
Uniprot:Q5AC00
Length = 230
Score = 127 (49.8 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K K K +D ++ L+ + I V D++ + LQ++R G ++L GK +++
Sbjct: 17 KKGKENKTRLFD-EVRSALDTFKYIWVLQFDDIRTPVLQDVRNDWVGSKLIL-GKRKVLQ 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ + E+ L L +G GL+FT +R APID
Sbjct: 75 KALGETIEEEYKDNLHQLSKLCEGLPGLLFTDESPETVEAYFKAYSKQDYSRAKSRAPID 134
Query: 124 VVVPPG---NTG----LD---PSQTSFFQVLN----IPTKINKGTVEIITPVELIRKGDK 169
+P G + G ++ P S + L +PTKI G + + P + KGD
Sbjct: 135 FTIPAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKIILEEPYVVCNKGDV 194
Query: 170 VGSSEAALLAKLGIRPFSYGLVVQSVYENGSVY 202
+ + +A LL + G+ + + + Y+ G V+
Sbjct: 195 LDTRQALLLKQFGVAASEFKIPILGYYD-GEVH 226
>WB|WBGene00017347 [details] [associations]
symbol:F10E7.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 eggNOG:COG0244
GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263 KO:K14815
OMA:AWKHSRF EMBL:FO081111 PIR:T34209 RefSeq:NP_495470.1
ProteinModelPortal:Q19302 SMR:Q19302 STRING:Q19302 PaxDb:Q19302
EnsemblMetazoa:F10E7.5 GeneID:174168 KEGG:cel:CELE_F10E7.5
UCSC:F10E7.5 CTD:174168 WormBase:F10E7.5 InParanoid:Q19302
NextBio:882821 Uniprot:Q19302
Length = 220
Score = 125 (49.1 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 38/175 (21%), Positives = 78/175 (44%)
Query: 22 LEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTI-RMHAEKTGNTAFLN 80
+++Y + + N+ S + IR+ + +S GKN ++ + + +++ N
Sbjct: 34 VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLH-K 92
Query: 81 LIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDP-SQTS 139
+L+G GL+FT ARVG VA VV+P G S
Sbjct: 93 ASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEP 152
Query: 140 FFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQS 194
+ L +PTK++KG + + E+ ++G+ + +A +L ++ + L+ ++
Sbjct: 153 QLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFKA 207
>UNIPROTKB|Q9UKD2 [details] [associations]
symbol:MRTO4 "mRNA turnover protein 4 homolog" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR001790 Pfam:PF00466 GO:GO:0005730 EMBL:CH471134
GO:GO:0031965 GO:GO:0042254 EMBL:AL035413 CTD:51154 eggNOG:COG0244
HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 EMBL:AF173378 EMBL:AY303790 EMBL:AK024227
EMBL:AK027569 EMBL:BC003013 EMBL:BC006504 IPI:IPI00106491
RefSeq:NP_057267.2 UniGene:Hs.463797 ProteinModelPortal:Q9UKD2
SMR:Q9UKD2 IntAct:Q9UKD2 STRING:Q9UKD2 PhosphoSite:Q9UKD2
DMDM:51316541 SWISS-2DPAGE:Q9UKD2 PaxDb:Q9UKD2 PeptideAtlas:Q9UKD2
PRIDE:Q9UKD2 DNASU:51154 Ensembl:ENST00000330263 GeneID:51154
KEGG:hsa:51154 UCSC:uc001bbs.3 GeneCards:GC01P019578
HGNC:HGNC:18477 HPA:HPA026438 HPA:HPA026446 neXtProt:NX_Q9UKD2
PharmGKB:PA162396216 InParanoid:Q9UKD2 PhylomeDB:Q9UKD2
ChiTaRS:MRTO4 GenomeRNAi:51154 NextBio:54049 Bgee:Q9UKD2
CleanEx:HS_MRTO4 Genevestigator:Q9UKD2 GermOnline:ENSG00000053372
Uniprot:Q9UKD2
Length = 239
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/198 (20%), Positives = 86/198 (43%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K + ++ + + + C ++ Y + + + N+ +++L++IR + S + GKN +M
Sbjct: 18 KGLELKQNLIEELRKC--VDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMM 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ + L+G VGL+FT AR G A
Sbjct: 75 VALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFT 134
Query: 124 VVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182
V + PG P S + L +PT + +G V +++ E+ ++GD + +A +L G
Sbjct: 135 VSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFG 194
Query: 183 IRPFSYGLVVQSVYENGS 200
+ + ++ ++++ S
Sbjct: 195 YEMAEFKVTIKYMWDSQS 212
>UNIPROTKB|F1SUQ2 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0005730 GO:GO:0031965 GO:GO:0042254
GO:GO:0005840 CTD:51154 GeneTree:ENSGT00390000006238 KO:K14815
OMA:AWKHSRF EMBL:FP236131 RefSeq:NP_001230644.1 UniGene:Ssc.6624
Ensembl:ENSSSCT00000003877 GeneID:100511136 KEGG:ssc:100511136
Uniprot:F1SUQ2
Length = 241
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 49/220 (22%), Positives = 96/220 (43%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K + ++ + + + C ++ Y + + + N+ +++L++IR + S + GKN +M
Sbjct: 18 KGLELKQNLIEELRKC--VDTYKFLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMM 74
Query: 64 RTI-RMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPI 122
+ R E+ + + L+G VGL+FT AR G A
Sbjct: 75 VALGRSPCEEYRDNLH-QVSKKLRGEVGLLFTNRTKEEVNEWFTKYGEMDYARAGNKATF 133
Query: 123 DVVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
V + PG P S + L +PT + KG V +++ E+ ++GD + +A +L
Sbjct: 134 TVNLDPGPLEQFPHSMEPQLRQLGLPTTLKKGVVTLLSDYEVCKEGDVLTPEQARILKLF 193
Query: 182 GIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASS 221
G + + ++ +++ S E+ DDL E S
Sbjct: 194 GYEMAEFKVTIRYMWDAQSGRFQEM----GDDLPESAPES 229
>UNIPROTKB|E2RG17 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 CTD:51154 GeneTree:ENSGT00390000006238
KO:K14815 OMA:AWKHSRF EMBL:AAEX03001814 RefSeq:XP_544532.2
Ensembl:ENSCAFT00000024114 GeneID:487406 KEGG:cfa:487406
NextBio:20861004 Uniprot:E2RG17
Length = 240
Score = 121 (47.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/196 (20%), Positives = 89/196 (45%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K + ++ + + + C ++ Y + + + N+ +++L++IR + S + GKN +M
Sbjct: 18 KGLELKQNLIEELRKC--VDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMM 74
Query: 64 RTI-RMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPI 122
+ R A++ + + L+G VGL+FT AR G A
Sbjct: 75 VALGRSPADEYKDNLH-QVSKKLKGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATF 133
Query: 123 DVVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKL 181
V + PG P S + L +PT + +G V +++ E+ ++GD + +A +L
Sbjct: 134 TVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGDVLTPEQARVLKLF 193
Query: 182 GIRPFSYGLVVQSVYE 197
G + + ++ +++
Sbjct: 194 GYEMAEFKVTIRYMWD 209
>UNIPROTKB|A4FV84 [details] [associations]
symbol:MRTO4 "mRNA turnover protein 4 homolog" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005730
GO:GO:0031965 GO:GO:0042254 EMBL:BC123852 IPI:IPI00718277
RefSeq:NP_001076868.1 UniGene:Bt.22192 STRING:A4FV84 PRIDE:A4FV84
Ensembl:ENSBTAT00000015861 GeneID:509932 KEGG:bta:509932 CTD:51154
eggNOG:COG0244 GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263
HOVERGEN:HBG052510 InParanoid:A4FV84 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 NextBio:20869201 Uniprot:A4FV84
Length = 239
Score = 120 (47.3 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 40/195 (20%), Positives = 84/195 (43%)
Query: 4 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMK 63
K + ++ + + + C ++ Y + + + N+ +++L++IR + S + GKN +M
Sbjct: 18 KGLELKQNLIEELRKC--VDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMM 74
Query: 64 RTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPID 123
+ + L+G VGL+FT AR G A
Sbjct: 75 VALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKYTEMDYARAGNKATFT 134
Query: 124 VVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182
V + PG P S + L +PT + KG V +++ E+ ++GD + +A +L G
Sbjct: 135 VNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFG 194
Query: 183 IRPFSYGLVVQSVYE 197
+ + ++ +++
Sbjct: 195 YEMAEFKVSIKYMWD 209
>RGD|1311709 [details] [associations]
symbol:Mrto4 "mRNA turnover 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 RGD:1311709 GO:GO:0042254
GO:GO:0005840 GeneTree:ENSGT00390000006238 IPI:IPI00365290
Ensembl:ENSRNOT00000024326 UCSC:RGD:1311709 Uniprot:F1LTU4
Length = 203
Score = 116 (45.9 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 43/195 (22%), Positives = 83/195 (42%)
Query: 28 ILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQG 87
+ + + N+ +++L++IR + S + GKN +M + + L+G
Sbjct: 3 LFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRG 61
Query: 88 NVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDP-SQTSFFQVLNI 146
VGL+FT AR G A + V + PG P S + L +
Sbjct: 62 EVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGL 121
Query: 147 PTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEV 206
PT + KG V +++ E+ ++GD + +A +L G + + ++ +++ S ++
Sbjct: 122 PTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQM 181
Query: 207 LDLSEDDLVEKFASS 221
+DDL E S
Sbjct: 182 ----DDDLPESAPES 192
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 318 301 0.00096 115 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 602 (64 KB)
Total size of DFA: 182 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.51u 0.13s 22.64t Elapsed: 00:00:01
Total cpu time: 22.52u 0.13s 22.65t Elapsed: 00:00:01
Start: Fri May 10 23:48:27 2013 End: Fri May 10 23:48:28 2013