Query 021077
Match_columns 317
No_of_seqs 213 out of 2009
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 07:25:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021077.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021077hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 7.7E-82 1.7E-86 543.5 20.7 301 13-317 2-303 (303)
2 KOG0373 Serine/threonine speci 100.0 3.9E-75 8.5E-80 494.8 20.8 302 12-317 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 8.6E-71 1.9E-75 507.2 33.1 301 13-317 2-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.7E-70 6E-75 501.1 31.1 284 14-301 2-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 1.4E-69 3E-74 501.4 31.3 285 10-298 3-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 2.5E-69 5.3E-74 499.0 31.9 298 10-312 7-313 (320)
7 KOG0371 Serine/threonine prote 100.0 1.3E-70 2.8E-75 476.8 17.8 313 1-317 7-319 (319)
8 cd07416 MPP_PP2B PP2B, metallo 100.0 2.9E-68 6.4E-73 492.4 32.2 287 12-304 1-301 (305)
9 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.3E-68 7.1E-73 493.1 30.7 292 9-304 11-308 (316)
10 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1E-67 2.3E-72 485.8 29.0 282 14-300 2-292 (293)
11 PTZ00244 serine/threonine-prot 100.0 3.4E-67 7.4E-72 481.8 29.8 282 13-299 3-293 (294)
12 KOG0374 Serine/threonine speci 100.0 7.4E-68 1.6E-72 490.7 25.1 271 26-300 31-303 (331)
13 smart00156 PP2Ac Protein phosp 100.0 1E-65 2.3E-70 469.0 29.6 269 27-300 1-270 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.6E-63 3.4E-68 467.4 31.6 293 9-304 7-371 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 4E-63 8.6E-68 460.0 29.0 275 25-299 19-311 (311)
16 KOG0375 Serine-threonine phosp 100.0 1.4E-63 3E-68 449.9 14.4 289 9-303 43-345 (517)
17 KOG0377 Protein serine/threoni 100.0 1.6E-52 3.5E-57 386.2 13.6 294 8-305 115-437 (631)
18 KOG0376 Serine-threonine phosp 100.0 4.5E-46 9.7E-51 350.5 14.5 292 10-305 166-463 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.9E-35 4.1E-40 262.9 22.4 214 57-285 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 3.4E-29 7.4E-34 226.1 20.8 196 54-290 1-226 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 4.5E-28 9.7E-33 213.5 16.1 182 57-272 1-198 (208)
22 PRK00166 apaH diadenosine tetr 100.0 9.2E-28 2E-32 219.2 17.9 220 54-289 1-261 (275)
23 cd07423 MPP_PrpE Bacillus subt 100.0 3.2E-27 6.9E-32 211.9 19.8 127 54-182 1-143 (234)
24 cd07413 MPP_PA3087 Pseudomonas 100.0 6.2E-27 1.3E-31 208.3 18.2 120 57-179 2-143 (222)
25 TIGR00668 apaH bis(5'-nucleosy 99.9 5.5E-27 1.2E-31 212.4 14.7 129 54-189 1-134 (279)
26 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.7E-26 7.9E-31 207.3 19.4 202 55-287 3-292 (304)
27 cd07422 MPP_ApaH Escherichia c 99.9 5.9E-27 1.3E-31 211.8 14.1 124 56-186 1-129 (257)
28 PHA02239 putative protein phos 99.9 3.1E-26 6.7E-31 205.0 17.7 177 54-273 1-221 (235)
29 PRK11439 pphA serine/threonine 99.9 5.4E-26 1.2E-30 201.8 16.8 181 52-273 15-208 (218)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1E-24 2.2E-29 192.2 19.5 191 54-283 1-204 (207)
31 PRK09968 serine/threonine-spec 99.9 5E-23 1.1E-27 182.7 18.2 181 53-273 14-208 (218)
32 PF00149 Metallophos: Calcineu 99.5 2.9E-13 6.4E-18 111.8 11.2 160 54-252 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.5 1.8E-12 3.8E-17 108.6 14.8 59 55-129 1-59 (155)
34 PRK09453 phosphodiesterase; Pr 99.4 3.4E-12 7.5E-17 110.1 15.2 69 54-130 1-77 (182)
35 PF12850 Metallophos_2: Calcin 99.4 5.6E-12 1.2E-16 105.0 12.5 137 54-270 1-137 (156)
36 TIGR00040 yfcE phosphoesterase 99.4 8.9E-12 1.9E-16 105.0 12.9 64 54-129 1-64 (158)
37 cd07397 MPP_DevT Myxococcus xa 99.3 8.2E-11 1.8E-15 105.1 13.3 158 55-253 2-208 (238)
38 cd07379 MPP_239FB Homo sapiens 99.3 5.2E-11 1.1E-15 97.6 10.7 118 55-257 1-120 (135)
39 cd07388 MPP_Tt1561 Thermus the 99.1 5.4E-09 1.2E-13 93.0 17.7 71 54-129 5-75 (224)
40 cd07394 MPP_Vps29 Homo sapiens 99.1 6.1E-09 1.3E-13 89.6 15.5 126 55-271 1-135 (178)
41 PRK05340 UDP-2,3-diacylglucosa 99.1 6.2E-10 1.3E-14 100.3 8.8 215 54-298 1-239 (241)
42 cd07392 MPP_PAE1087 Pyrobaculu 99.0 7.1E-09 1.5E-13 88.9 12.9 65 56-130 1-66 (188)
43 cd00838 MPP_superfamily metall 98.9 9.2E-09 2E-13 81.8 10.9 117 57-257 1-119 (131)
44 cd07400 MPP_YydB Bacillus subt 98.9 5.9E-08 1.3E-12 80.0 13.3 117 56-257 1-129 (144)
45 cd07403 MPP_TTHA0053 Thermus t 98.9 3.6E-08 7.7E-13 80.3 11.2 107 57-257 1-107 (129)
46 COG0622 Predicted phosphoester 98.8 1.6E-07 3.5E-12 80.1 14.9 161 54-300 2-166 (172)
47 cd07404 MPP_MS158 Microscilla 98.8 5E-09 1.1E-13 88.7 5.5 67 56-129 1-68 (166)
48 cd07399 MPP_YvnB Bacillus subt 98.8 7E-07 1.5E-11 79.0 17.4 192 55-299 2-213 (214)
49 COG2129 Predicted phosphoester 98.8 8.9E-07 1.9E-11 77.6 17.5 192 53-297 3-224 (226)
50 COG0639 ApaH Diadenosine tetra 98.7 2.3E-08 4.9E-13 81.8 6.9 143 131-274 3-154 (155)
51 TIGR03729 acc_ester putative p 98.7 8.1E-08 1.8E-12 86.4 8.2 68 55-129 1-74 (239)
52 PRK11340 phosphodiesterase Yae 98.6 2E-07 4.3E-12 85.5 10.7 71 53-129 49-125 (271)
53 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 1.5E-07 3.2E-12 84.3 9.2 68 56-129 1-81 (231)
54 cd07396 MPP_Nbla03831 Homo sap 98.5 2.9E-06 6.3E-11 77.6 14.0 72 55-130 2-87 (267)
55 PRK04036 DNA polymerase II sma 98.5 3E-06 6.4E-11 84.3 14.8 118 53-178 243-388 (504)
56 cd07395 MPP_CSTP1 Homo sapiens 98.5 1.7E-05 3.7E-10 72.1 18.8 59 230-290 195-254 (262)
57 cd07383 MPP_Dcr2 Saccharomyces 98.5 2.4E-06 5.2E-11 74.5 12.2 70 54-127 3-87 (199)
58 PRK11148 cyclic 3',5'-adenosin 98.5 2.2E-05 4.8E-10 72.0 18.8 73 53-129 14-98 (275)
59 cd07402 MPP_GpdQ Enterobacter 98.3 9.6E-06 2.1E-10 72.5 13.3 71 55-129 1-83 (240)
60 cd07385 MPP_YkuE_C Bacillus su 98.3 6.5E-07 1.4E-11 79.1 5.6 70 54-129 2-76 (223)
61 cd07393 MPP_DR1119 Deinococcus 98.3 8.1E-06 1.7E-10 73.1 11.8 43 84-128 41-83 (232)
62 cd07398 MPP_YbbF-LpxH Escheric 98.3 1.1E-06 2.3E-11 77.4 5.8 29 229-257 177-205 (217)
63 cd08165 MPP_MPPE1 human MPPE1 98.2 2.3E-05 5E-10 65.9 10.8 46 84-129 38-89 (156)
64 TIGR00619 sbcd exonuclease Sbc 98.0 1.4E-05 3E-10 72.6 6.9 72 54-129 1-88 (253)
65 COG2908 Uncharacterized protei 98.0 2.6E-05 5.7E-10 69.1 8.3 199 57-292 1-230 (237)
66 cd00839 MPP_PAPs purple acid p 98.0 6.7E-05 1.5E-09 69.2 10.8 73 54-130 5-82 (294)
67 COG1409 Icc Predicted phosphoh 97.9 0.001 2.2E-08 60.7 18.1 74 54-133 1-82 (301)
68 PHA02546 47 endonuclease subun 97.9 2.3E-05 5.1E-10 74.2 6.8 72 54-129 1-89 (340)
69 PF06874 FBPase_2: Firmicute f 97.8 0.0002 4.2E-09 71.3 12.0 71 229-301 507-587 (640)
70 cd07401 MPP_TMEM62_N Homo sapi 97.8 0.00016 3.5E-09 65.8 10.7 70 56-129 2-89 (256)
71 cd00840 MPP_Mre11_N Mre11 nucl 97.8 4.9E-05 1.1E-09 66.8 6.2 73 55-131 1-91 (223)
72 cd07391 MPP_PF1019 Pyrococcus 97.7 0.00012 2.7E-09 62.4 7.2 47 84-130 41-89 (172)
73 PF14582 Metallophos_3: Metall 97.6 0.00076 1.6E-08 59.5 10.5 74 53-130 5-103 (255)
74 TIGR00024 SbcD_rel_arch putati 97.6 0.00014 3.1E-09 64.8 6.2 73 54-130 15-103 (225)
75 cd08163 MPP_Cdc1 Saccharomyces 97.6 0.0048 1E-07 56.2 16.1 31 228-260 203-233 (257)
76 cd07380 MPP_CWF19_N Schizosacc 97.5 0.00081 1.8E-08 56.2 9.8 121 57-252 1-121 (150)
77 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00025 5.4E-09 64.7 7.1 73 56-129 1-86 (262)
78 TIGR00583 mre11 DNA repair pro 97.4 0.00037 7.9E-09 67.4 7.6 56 53-112 3-70 (405)
79 cd07390 MPP_AQ1575 Aquifex aeo 97.4 0.00029 6.3E-09 59.8 5.9 68 56-130 1-83 (168)
80 cd08166 MPP_Cdc1_like_1 unchar 97.4 0.0022 4.8E-08 55.8 10.9 46 84-129 42-93 (195)
81 COG1408 Predicted phosphohydro 97.4 0.00034 7.4E-09 64.5 6.2 72 53-130 44-119 (284)
82 PRK10966 exonuclease subunit S 97.4 0.00033 7.1E-09 68.0 6.3 72 54-130 1-88 (407)
83 cd07386 MPP_DNA_pol_II_small_a 97.2 0.00043 9.3E-09 62.3 5.1 72 57-130 2-95 (243)
84 cd07387 MPP_PolD2_C PolD2 (DNA 97.0 0.032 6.9E-07 50.8 14.4 178 85-297 43-257 (257)
85 COG1311 HYS2 Archaeal DNA poly 96.8 0.07 1.5E-06 52.0 16.1 210 55-299 227-472 (481)
86 cd00845 MPP_UshA_N_like Escher 96.7 0.0024 5.1E-08 57.6 5.1 67 55-129 2-82 (252)
87 cd07384 MPP_Cdc1_like Saccharo 96.7 0.0035 7.5E-08 53.5 5.6 47 84-130 45-101 (171)
88 COG1407 Predicted ICC-like pho 96.5 0.0033 7.2E-08 56.0 4.7 75 52-133 18-114 (235)
89 COG0420 SbcD DNA repair exonuc 96.5 0.0071 1.5E-07 58.3 7.3 73 54-130 1-89 (390)
90 KOG3325 Membrane coat complex 96.5 0.028 6E-07 46.4 9.1 130 56-272 3-137 (183)
91 COG4186 Predicted phosphoester 96.5 0.0081 1.8E-07 49.9 6.1 43 84-130 45-87 (186)
92 cd08164 MPP_Ted1 Saccharomyces 96.3 0.01 2.2E-07 51.6 6.0 67 60-129 23-111 (193)
93 PLN02533 probable purple acid 96.1 0.0072 1.6E-07 59.1 4.9 71 53-130 139-212 (427)
94 PF08321 PPP5: PPP5 TPR repeat 96.0 0.01 2.3E-07 45.5 4.3 51 2-52 44-95 (95)
95 cd07410 MPP_CpdB_N Escherichia 95.9 0.01 2.2E-07 54.4 4.6 66 55-129 2-95 (277)
96 cd00842 MPP_ASMase acid sphing 95.7 0.16 3.5E-06 46.8 11.8 74 56-131 40-124 (296)
97 COG1768 Predicted phosphohydro 95.6 0.16 3.5E-06 43.4 10.3 42 84-129 43-86 (230)
98 KOG0376 Serine-threonine phosp 95.6 0.0055 1.2E-07 59.4 1.7 115 26-145 14-132 (476)
99 cd07378 MPP_ACP5 Homo sapiens 95.0 0.048 1E-06 49.7 5.9 25 230-254 190-214 (277)
100 cd07408 MPP_SA0022_N Staphyloc 95.0 0.031 6.8E-07 50.7 4.5 66 55-129 2-82 (257)
101 cd07412 MPP_YhcR_N Bacillus su 94.8 0.029 6.4E-07 51.8 3.8 67 55-129 2-88 (288)
102 KOG3662 Cell division control 93.9 0.12 2.6E-06 49.8 5.9 73 53-128 48-143 (410)
103 cd07411 MPP_SoxB_N Thermus the 92.9 0.14 2.9E-06 46.7 4.4 67 55-129 2-95 (264)
104 cd07409 MPP_CD73_N CD73 ecto-5 92.5 0.23 5E-06 45.7 5.3 67 55-129 2-94 (281)
105 COG3855 Fbp Uncharacterized pr 92.4 3 6.6E-05 40.7 12.6 255 1-270 232-562 (648)
106 TIGR00282 metallophosphoestera 92.1 0.26 5.7E-06 45.0 5.2 68 54-129 1-71 (266)
107 PRK09419 bifunctional 2',3'-cy 91.4 0.23 5.1E-06 54.7 4.7 66 54-128 661-735 (1163)
108 KOG1378 Purple acid phosphatas 91.4 0.54 1.2E-05 45.9 6.6 33 231-263 322-354 (452)
109 cd07406 MPP_CG11883_N Drosophi 91.2 0.39 8.4E-06 43.6 5.2 65 56-128 3-82 (257)
110 KOG1432 Predicted DNA repair e 89.7 0.95 2.1E-05 42.5 6.4 45 84-129 100-147 (379)
111 KOG2863 RNA lariat debranching 89.4 0.46 1E-05 44.8 4.1 74 54-131 1-90 (456)
112 PF04042 DNA_pol_E_B: DNA poly 89.2 0.56 1.2E-05 40.9 4.4 72 56-131 1-93 (209)
113 cd07405 MPP_UshA_N Escherichia 86.9 0.7 1.5E-05 42.6 3.7 70 55-129 2-87 (285)
114 KOG2476 Uncharacterized conser 86.1 1.8 3.9E-05 42.2 6.0 71 53-126 5-75 (528)
115 cd07382 MPP_DR1281 Deinococcus 85.7 1.6 3.6E-05 39.6 5.4 67 55-129 1-70 (255)
116 COG0737 UshA 5'-nucleotidase/2 85.6 0.46 1E-05 47.6 1.9 69 53-129 26-115 (517)
117 cd08162 MPP_PhoA_N Synechococc 85.0 1.1 2.3E-05 42.1 4.0 69 55-128 2-90 (313)
118 cd07407 MPP_YHR202W_N Saccharo 84.3 0.96 2.1E-05 41.7 3.2 70 55-129 7-97 (282)
119 KOG3339 Predicted glycosyltran 83.7 15 0.00033 31.7 9.8 85 86-176 40-140 (211)
120 PRK09420 cpdB bifunctional 2', 82.6 1.4 2.9E-05 45.6 3.9 69 52-128 24-121 (649)
121 TIGR01390 CycNucDiestase 2',3' 81.9 1.4 3.1E-05 45.3 3.7 66 55-128 4-98 (626)
122 PRK09419 bifunctional 2',3'-cy 80.4 2.1 4.5E-05 47.3 4.6 67 54-128 42-138 (1163)
123 KOG0918 Selenium-binding prote 80.3 0.09 1.9E-06 50.0 -5.1 193 85-289 48-250 (476)
124 PTZ00422 glideosome-associated 79.8 2 4.3E-05 41.6 3.6 71 54-129 27-109 (394)
125 KOG3947 Phosphoesterases [Gene 79.4 2.6 5.7E-05 38.5 4.1 67 53-131 61-128 (305)
126 PTZ00235 DNA polymerase epsilo 79.3 7.9 0.00017 35.8 7.2 77 53-129 27-122 (291)
127 PRK09558 ushA bifunctional UDP 77.3 1.1 2.3E-05 45.4 1.1 72 53-129 34-121 (551)
128 PRK11907 bifunctional 2',3'-cy 76.3 2.8 6.2E-05 44.3 3.9 68 53-128 115-212 (814)
129 TIGR01530 nadN NAD pyrophospha 75.3 4.2 9.1E-05 41.2 4.8 66 56-129 3-94 (550)
130 KOG2310 DNA repair exonuclease 72.8 10 0.00022 37.9 6.4 57 53-113 13-81 (646)
131 COG3855 Fbp Uncharacterized pr 70.8 2.7 5.8E-05 41.1 2.0 44 85-133 191-234 (648)
132 KOG2679 Purple (tartrate-resis 67.4 3 6.5E-05 38.2 1.4 70 55-129 45-126 (336)
133 PRK09418 bifunctional 2',3'-cy 66.1 6.1 0.00013 41.7 3.6 68 53-128 39-141 (780)
134 cd07381 MPP_CapA CapA and rela 60.1 20 0.00042 31.8 5.4 39 234-274 200-238 (239)
135 PF06874 FBPase_2: Firmicute f 50.7 14 0.00031 37.6 3.1 42 85-131 185-226 (640)
136 smart00854 PGA_cap Bacterial c 49.7 36 0.00078 30.2 5.3 36 236-273 200-235 (239)
137 PF02875 Mur_ligase_C: Mur lig 45.5 35 0.00075 25.2 3.9 70 54-125 12-81 (91)
138 COG4320 Uncharacterized protei 44.9 40 0.00086 31.7 4.8 61 42-113 45-108 (410)
139 cd07378 MPP_ACP5 Homo sapiens 41.3 1.6E+02 0.0035 26.3 8.4 69 55-129 2-83 (277)
140 PRK10773 murF UDP-N-acetylmura 38.6 1.8E+02 0.004 28.5 8.8 66 54-124 325-392 (453)
141 PF13258 DUF4049: Domain of un 35.7 36 0.00078 30.6 2.9 90 85-181 85-187 (318)
142 PF09587 PGA_cap: Bacterial ca 33.7 84 0.0018 28.0 5.1 39 234-274 209-247 (250)
143 TIGR00282 metallophosphoestera 32.8 36 0.00079 31.1 2.6 39 87-129 2-41 (266)
144 cd07382 MPP_DR1281 Deinococcus 30.0 64 0.0014 29.3 3.7 40 87-129 1-40 (255)
145 PF09949 DUF2183: Uncharacteri 29.3 2.5E+02 0.0054 21.6 6.4 33 84-122 63-95 (100)
146 PF10083 DUF2321: Uncharacteri 28.6 23 0.0005 29.6 0.5 46 228-279 22-76 (158)
147 COG0770 MurF UDP-N-acetylmuram 27.4 3.3E+02 0.0071 27.0 8.4 95 27-125 300-395 (451)
148 COG3433 Aryl carrier domain [S 26.0 38 0.00081 24.5 1.1 22 93-114 23-44 (74)
149 PF12641 Flavodoxin_3: Flavodo 25.7 3.4E+02 0.0073 22.7 7.1 57 57-113 2-67 (160)
150 PF06569 DUF1128: Protein of u 25.1 1.3E+02 0.0028 21.7 3.8 38 5-42 32-69 (71)
151 PTZ00235 DNA polymerase epsilo 24.5 2E+02 0.0044 26.7 5.9 90 84-180 26-121 (291)
152 KOG3425 Uncharacterized conser 23.9 2.8E+02 0.006 22.3 5.7 60 66-129 12-79 (128)
153 TIGR01143 murF UDP-N-acetylmur 23.8 2.9E+02 0.0062 26.7 7.2 70 53-127 295-366 (417)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-82 Score=543.51 Aligned_cols=301 Identities=65% Similarity=1.210 Sum_probs=292.4
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEee
Q 021077 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMG 92 (317)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLG 92 (317)
++++.++++++++.+++.++..||.++++++.+|+++..++.|+.|||||||++.||+.+|+..|.+ +..+|+|||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~----~~t~YLFLG 77 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDV----PETNYLFLG 77 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCC----CCCceEeec
Confidence 5789999999999999999999999999999999999999999999999999999999999999998 899999999
Q ss_pred ceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEE
Q 021077 93 DYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 172 (317)
Q Consensus 93 D~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l 172 (317)
||||||..|+|++.+|+.||.+||+++.+||||||.+.++..|||++||.+|||...+|+.+.+.|+.||++|+|++++|
T Consensus 78 DyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kif 157 (303)
T KOG0372|consen 78 DYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIF 157 (303)
T ss_pred chhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEeccccc
Q 021077 173 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 252 (317)
Q Consensus 173 ~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~ 252 (317)
|||||++|++.++++|+.++|..++|+.+.++|+|||||.+..+|..+|||+||.||.+++++|++.||++.|+|+||.+
T Consensus 158 CVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv 237 (303)
T KOG0372|consen 158 CVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLV 237 (303)
T ss_pred EEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCCCCCCCCCCCC-CCCC
Q 021077 253 MDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTP-DYFL 317 (317)
Q Consensus 253 ~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (317)
.+||+..++++++|||||||||++++|.||+|+|+++....|+.|+..|..++..-.+++. |||+
T Consensus 238 ~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 238 MEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 9999999999999999999999999999999999999999999999999887765555554 9985
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-75 Score=494.76 Aligned_cols=302 Identities=60% Similarity=1.113 Sum_probs=292.7
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEe
Q 021077 12 TDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFM 91 (317)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfL 91 (317)
-++++||+.+++|+.++++++..||+.+++++..|.++.+++.|+.|+|||||++.+|..+|+..|.. ++..|||+
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~v----P~tnYiFm 79 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQV----PDTNYIFM 79 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCC----CCcceEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999998 79999999
Q ss_pred eceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCE
Q 021077 92 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEI 171 (317)
Q Consensus 92 GD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~ 171 (317)
|||||||..|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..+||....|+.+.+.|+.|+++|+|++++
T Consensus 80 GDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~v 159 (306)
T KOG0373|consen 80 GDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKV 159 (306)
T ss_pred ccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccc
Q 021077 172 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQL 251 (317)
Q Consensus 172 l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~ 251 (317)
+|||||+||++..++||+-+.|.+++|.++.++|++||||++.+.|..+|||+|+.||.+++++|+..|++++|.|+||.
T Consensus 160 LCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQL 239 (306)
T KOG0373|consen 160 LCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQL 239 (306)
T ss_pred EEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEecCCe-EEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021077 252 VMDGFNWAHEQK-VVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 317 (317)
Q Consensus 252 ~~~G~~~~~~~~-~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (317)
+.+||+.-++++ ++|||||||||++++|.|++|.++++++.+++.|..+|-.++..-+++.-.||+
T Consensus 240 V~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 240 VQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 999999888777 999999999999999999999999999999999999998876666677778885
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=8.6e-71 Score=507.18 Aligned_cols=301 Identities=55% Similarity=1.062 Sum_probs=283.5
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEee
Q 021077 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMG 92 (317)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLG 92 (317)
+++++++++.+...++++++.+||++|++++++||++++++.+++|||||||++.+|.++|+..+.. +.++++|||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~----~~~~~lfLG 77 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDI----PNANYIFIG 77 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCC----CCceEEEee
Confidence 4788999999999999999999999999999999999999999999999999999999999999987 788999999
Q ss_pred ceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEE
Q 021077 93 DYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 172 (317)
Q Consensus 93 D~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l 172 (317)
||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+...+|+.+.++|++||++++++++++
T Consensus 78 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~ 157 (303)
T PTZ00239 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQIL 157 (303)
T ss_pred eEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEE
Confidence 99999999999999999999999999999999999999999999999999999877899999999999999999999999
Q ss_pred EEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEeccccc
Q 021077 173 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 252 (317)
Q Consensus 173 ~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~ 252 (317)
|||||++|.+.++++++.++|+.+.|.++.++|+|||||.+..+|.+++||.|+.||++++++||+++++++||||||++
T Consensus 158 cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 158 CVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred EEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhh
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred ccceEEecC-CeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021077 253 MDGFNWAHE-QKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 317 (317)
Q Consensus 253 ~~G~~~~~~-~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (317)
++||+..++ ++++||||||+||+..+|.||+|.++++..++|++|+|.+...+...+..++.||.
T Consensus 238 ~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 238 MEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred ccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 999998764 45999999999999999999999999999999999999988754443444457874
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.7e-70 Score=501.10 Aligned_cols=284 Identities=74% Similarity=1.307 Sum_probs=275.3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeec
Q 021077 14 LDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGD 93 (317)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD 93 (317)
+++++++++++..++++++.+||++|++++++||++++++.+++|||||||++.+|.++|+..+.+ +.+++|||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~----~~~~~lfLGD 77 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDP----PDTNYLFLGD 77 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCC----CCCeEEEEeE
Confidence 688999999999999999999999999999999999999999999999999999999999999987 6889999999
Q ss_pred eecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEE
Q 021077 94 YVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFC 173 (317)
Q Consensus 94 ~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~ 173 (317)
|||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+...+|..+.++|++||++|+++++++|
T Consensus 78 yVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~c 157 (285)
T cd07415 78 YVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFC 157 (285)
T ss_pred ECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEE
Confidence 99999999999999999999999999999999999999999999999999998778999999999999999999999999
Q ss_pred EcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccc
Q 021077 174 LHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVM 253 (317)
Q Consensus 174 vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~ 253 (317)
|||||+|.+.++++++.++|+.+.+.++.+.|+|||||.+..+|.+++||.|+.||++++++||+++++++||||||+++
T Consensus 158 vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~ 237 (285)
T cd07415 158 VHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVM 237 (285)
T ss_pred EcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCcccc
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred cceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCC
Q 021077 254 DGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAP 301 (317)
Q Consensus 254 ~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 301 (317)
+||+..++++++||||||+||+..+|+||+|.|+++..++|++|+|.|
T Consensus 238 ~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 238 EGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 999999999999999999999999999999999999999999999865
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.4e-69 Score=501.42 Aligned_cols=285 Identities=33% Similarity=0.620 Sum_probs=261.2
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccC----CeeEeeCCCCCHHHHHHHHHHcCCCCCCCCC
Q 021077 10 TTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCPQECPD 85 (317)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~----~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~ 85 (317)
+..+++++++++.+.+.++++++.+||++|+++|++||+++++.. |++|||||||++.+|.++|+..|.++ ..
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~---~~ 79 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPS---PE 79 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCC---cc
Confidence 456789999999999999999999999999999999999998875 89999999999999999999999873 45
Q ss_pred CcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCC--hhhHHHHHHHhhcCCe
Q 021077 86 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPL 163 (317)
Q Consensus 86 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~f~~lPl 163 (317)
++|||||||||||++|+||+.+|++||..+|+++++||||||.+.++..|||.+|+..+|+. ..+|..+.++|++||+
T Consensus 80 ~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPl 159 (321)
T cd07420 80 NPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPL 159 (321)
T ss_pred ceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCc
Confidence 78999999999999999999999999999999999999999999999999999999999974 6799999999999999
Q ss_pred EEEEeCCEEEEcCCCCCCccchhhhhhcccCcc-----CCC----------------------CCCccccccCCCCCCCC
Q 021077 164 TALVESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG 216 (317)
Q Consensus 164 ~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~~~~ 216 (317)
+|++++++|||||||++ ..++++++.++|+.. .|. .+.+.|+|||||.+..+
T Consensus 160 aaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~ 238 (321)
T cd07420 160 ATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKG 238 (321)
T ss_pred eEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCC
Confidence 99999999999999997 468899998887421 111 03568999999987544
Q ss_pred -CCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEE
Q 021077 217 -WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFI 295 (317)
Q Consensus 217 -~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~ 295 (317)
|.+++||.|+.||.+++++||+++++++||||||++++||++.++++++|||||++||+.++|.||+|.|+++..++|+
T Consensus 239 ~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~ 318 (321)
T cd07420 239 CKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFV 318 (321)
T ss_pred CCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEE
Confidence 7778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Eee
Q 021077 296 QFE 298 (317)
Q Consensus 296 ~~~ 298 (317)
+|.
T Consensus 319 ~~~ 321 (321)
T cd07420 319 QYQ 321 (321)
T ss_pred EeC
Confidence 874
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.5e-69 Score=499.00 Aligned_cols=298 Identities=44% Similarity=0.896 Sum_probs=280.2
Q ss_pred CcccHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCC
Q 021077 10 TTTDLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQ 81 (317)
Q Consensus 10 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~ 81 (317)
+..+++++|+++.+.. .++++++..||++|+++|++||++++++.+++|||||||++.+|.++|+..+.+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~-- 84 (320)
T PTZ00480 7 GEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYP-- 84 (320)
T ss_pred cCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCC--
Confidence 3445899999998654 589999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcC
Q 021077 82 ECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYF 161 (317)
Q Consensus 82 ~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~l 161 (317)
+.+++||||||||||++++|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++|
T Consensus 85 --~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~L 161 (320)
T PTZ00480 85 --PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCL 161 (320)
T ss_pred --CcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhc
Confidence 788999999999999999999999999999999999999999999999999999999999994 78999999999999
Q ss_pred CeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCC-CCCCCcCCCCCccccChHHHHHHHHhC
Q 021077 162 PLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTN 240 (317)
Q Consensus 162 Pl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~ 240 (317)
|++|+|+++++||||||+|.+.++++++.++|+.+.+.++.++|+|||||.+ ..+|.+++||.|+.||++++++||+++
T Consensus 162 PlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n 241 (320)
T PTZ00480 162 PVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKH 241 (320)
T ss_pred cHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999986 678999999999999999999999999
Q ss_pred CCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCCCCCCCCCCC
Q 021077 241 NLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRT 312 (317)
Q Consensus 241 ~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (317)
++++||||||++++||++.++++++||||||+||+..+|.||+|.|+++..++|++|+|.+....+.++-++
T Consensus 242 ~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~~~ 313 (320)
T PTZ00480 242 ELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGASQQNKP 313 (320)
T ss_pred CCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999988877555444444
No 7
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-70 Score=476.80 Aligned_cols=313 Identities=78% Similarity=1.340 Sum_probs=306.4
Q ss_pred CCCCCCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCC
Q 021077 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCP 80 (317)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~ 80 (317)
|.|+..++...-.++.+|+++.+|+.+++.++..+|+.|+++|.+|.++.++..+++||||+||+|++|.++++..|..
T Consensus 7 ~ra~~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~- 85 (319)
T KOG0371|consen 7 MRARILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLA- 85 (319)
T ss_pred ccccccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCC-
Confidence 6788889999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred CCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhc
Q 021077 81 QECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDY 160 (317)
Q Consensus 81 ~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~ 160 (317)
++..++|+|||||||++|+|++.++.++|.+||++|.+||||||.+.+...|||++||++|||...+|+.+.+.|++
T Consensus 86 ---pdtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy 162 (319)
T KOG0371|consen 86 ---PDTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 162 (319)
T ss_pred ---CCcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhC
Q 021077 161 FPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN 240 (317)
Q Consensus 161 lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~ 240 (317)
+|+++.|+++++|+|||++|++.+++.++.++|.+++|.++.+||+||+||+++.+|..++||.++.||.+..++|-.++
T Consensus 163 ~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n 242 (319)
T KOG0371|consen 163 LPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKN 242 (319)
T ss_pred cchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021077 241 NLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 317 (317)
Q Consensus 241 ~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (317)
|++++-|.|+.+.+||.......++||||||+||++++|.+|++.++++....|.||+|+|.+-+....++.||||+
T Consensus 243 ~lslisRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 243 GLSLISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred CchHhHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999996
No 8
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=2.9e-68 Score=492.42 Aligned_cols=287 Identities=42% Similarity=0.755 Sum_probs=271.2
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEe
Q 021077 12 TDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFM 91 (317)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfL 91 (317)
+.++.+++++++++.++++++.+||++|+++|++||++++++.|++|||||||++.+|.++|+..+.+ +.++||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~----~~~~ylFL 76 (305)
T cd07416 1 PRIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSP----ANTRYLFL 76 (305)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCC----CCceEEEE
Confidence 46788999999999999999999999999999999999999999999999999999999999999987 78999999
Q ss_pred eceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCE
Q 021077 92 GDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEI 171 (317)
Q Consensus 92 GD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~ 171 (317)
|||||||++|+|++.+++++|..+|.++++||||||.+.++..++|..++..+| ..++|..+.++|++||+++++++++
T Consensus 77 GDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i 155 (305)
T cd07416 77 GDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQF 155 (305)
T ss_pred CCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCE
Confidence 999999999999999999999999999999999999999999999999999999 4789999999999999999999999
Q ss_pred EEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCC-------CCCc-CCCCCccccChHHHHHHHHhCCCc
Q 021077 172 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-------GWGI-SPRGAGYTFGQDISEQFNHTNNLK 243 (317)
Q Consensus 172 l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-------~~~~-~~rg~~~~fg~~~~~~fl~~~~~~ 243 (317)
+|||||++|.+.++++++.++|+.+.|..+.++|+|||||.+.. .|.. ++||.|+.||++++++||++++++
T Consensus 156 ~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~ 235 (305)
T cd07416 156 LCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLL 235 (305)
T ss_pred EEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCe
Confidence 99999999999999999999999999999999999999997522 3655 489999999999999999999999
Q ss_pred EEEecccccccceEEecCC------eEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCCC
Q 021077 244 LIARAHQLVMDGFNWAHEQ------KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRG 304 (317)
Q Consensus 244 ~iIrGH~~~~~G~~~~~~~------~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 304 (317)
+||||||++++||+..+++ +++||||||+||+.++|+||+|.|+++. ++|++|+++|||-
T Consensus 236 ~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~~ 301 (305)
T cd07416 236 SIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHPY 301 (305)
T ss_pred EEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCCC
Confidence 9999999999999988776 8999999999999999999999999885 7999999999983
No 9
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.3e-68 Score=493.14 Aligned_cols=292 Identities=37% Similarity=0.722 Sum_probs=276.2
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCC----eeEeeCCCCCHHHHHHHHHHcCCCCCCCC
Q 021077 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSP----VTICGDIHGQFHDLAELFQIGGKCPQECP 84 (317)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~----i~viGDiHG~~~~l~~ll~~~~~~~~~~~ 84 (317)
.+...+++++++++++..++++++.+||++|++++++||++++++.+ ++||||||||+.+|.++|+..++++ .
T Consensus 11 i~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~---~ 87 (316)
T cd07417 11 VTLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPS---E 87 (316)
T ss_pred CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCC---c
Confidence 66778999999999999999999999999999999999999988754 9999999999999999999999863 4
Q ss_pred CCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeE
Q 021077 85 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 164 (317)
Q Consensus 85 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~ 164 (317)
.+++||||||||||++|+||+.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..++..+.++|++||++
T Consensus 88 ~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPla 166 (316)
T cd07417 88 TNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLA 166 (316)
T ss_pred cCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHh
Confidence 56899999999999999999999999999999999999999999999999999999999994 67999999999999999
Q ss_pred EEEeCCEEEEcCCC-CCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCc
Q 021077 165 ALVESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLK 243 (317)
Q Consensus 165 ~~v~~~~l~vHgGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~ 243 (317)
++++++++|||||+ ++...+++++++++|+.+.+.++.++|+|||||.+..+|.+++||.|+.||.+++++||++++++
T Consensus 167 aii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~ 246 (316)
T cd07417 167 HLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLE 246 (316)
T ss_pred heeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCc
Confidence 99999999999999 56788999999999999999899999999999998888999999999999999999999999999
Q ss_pred EEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeC-CCceEEEEeecCCCCC
Q 021077 244 LIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD-CRSHTFIQFEPAPRRG 304 (317)
Q Consensus 244 ~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~~ 304 (317)
+||||||++++||+..++++++||||||+||+..+|.||+|.|++ ++.++|++|++.|+|.
T Consensus 247 ~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~ 308 (316)
T cd07417 247 YIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPN 308 (316)
T ss_pred EEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCC
Confidence 999999999999999999999999999999999999999999999 8899999999999884
No 10
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1e-67 Score=485.82 Aligned_cols=282 Identities=46% Similarity=0.969 Sum_probs=268.6
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCC
Q 021077 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPD 85 (317)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~ 85 (317)
++++|+++.+.. .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.+ +.
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~----~~ 77 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFP----PE 77 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCC----Cc
Confidence 567777777554 689999999999999999999999999999999999999999999999999998 78
Q ss_pred CcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEE
Q 021077 86 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTA 165 (317)
Q Consensus 86 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~ 165 (317)
+++||||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++||+++
T Consensus 78 ~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa 156 (293)
T cd07414 78 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAA 156 (293)
T ss_pred ceEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999994 789999999999999999
Q ss_pred EEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCC-CCCCCcCCCCCccccChHHHHHHHHhCCCcE
Q 021077 166 LVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKL 244 (317)
Q Consensus 166 ~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 244 (317)
+++++++|||||++|.+.++++++.++|+.+.+..+.+.|+|||||.. ..+|.+++||.|+.||.+++++||+++++++
T Consensus 157 ~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~ 236 (293)
T cd07414 157 IIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDL 236 (293)
T ss_pred hhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeE
Confidence 999999999999999999999999999999999999999999999986 6789999999999999999999999999999
Q ss_pred EEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecC
Q 021077 245 IARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 300 (317)
Q Consensus 245 iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 300 (317)
||||||++++||+...+++++||||||+||+..+|+||+|.|+++..++|++|+|.
T Consensus 237 iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 237 ICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred EEECCccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999864
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.4e-67 Score=481.83 Aligned_cols=282 Identities=39% Similarity=0.802 Sum_probs=266.7
Q ss_pred cHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCC
Q 021077 13 DLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECP 84 (317)
Q Consensus 13 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~ 84 (317)
.++.+|+++.+.. .++++++.+||++|+++|++||++++++.+++|||||||++.+|.++|+..+.+ +
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~----~ 78 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFP----P 78 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCC----C
Confidence 4567777776543 589999999999999999999999999999999999999999999999999987 6
Q ss_pred CCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeE
Q 021077 85 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 164 (317)
Q Consensus 85 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~ 164 (317)
.++++|||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..++..+|+ ..+|+.+.++|++||++
T Consensus 79 ~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPla 157 (294)
T PTZ00244 79 YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVC 157 (294)
T ss_pred cccEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchh
Confidence 78999999999999999999999999999999999999999999999999999999999995 78999999999999999
Q ss_pred EEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCC-CCCCCcCCCCCccccChHHHHHHHHhCCCc
Q 021077 165 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLK 243 (317)
Q Consensus 165 ~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~ 243 (317)
++++++++|||||++|.+.++++++.++|+.+.+..+.++|++||||.+ ..+|.+++||.|+.||++++++||++++++
T Consensus 158 aii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~ 237 (294)
T PTZ00244 158 CVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMD 237 (294)
T ss_pred eEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999999999999999986 678999999999999999999999999999
Q ss_pred EEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeec
Q 021077 244 LIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 299 (317)
Q Consensus 244 ~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 299 (317)
+||||||++++||++.++++++||||||+||+..+|.||+|.|+++..++|++|..
T Consensus 238 ~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 238 LIVRAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred EEEEcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999999999999999999999999999999999999999999999999988753
No 12
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=7.4e-68 Score=490.70 Aligned_cols=271 Identities=49% Similarity=0.967 Sum_probs=264.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcC-CCCCCCCCCcEEEeeceecCCCCcHHH
Q 021077 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG-KCPQECPDTNYLFMGDYVDRGYYSVET 104 (317)
Q Consensus 26 ~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~-~~~~~~~~~~~vfLGD~vDrG~~s~ev 104 (317)
.++++++.+||..+.++|..+|+++++++||.|+|||||++.+|+++|+..| ++ +..+|||||||||||++|+|+
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~p----p~~~ylFLGDYVDRG~~slE~ 106 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFP----PDQNYVFLGDYVDRGKQSLET 106 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCC----CcccEEEecccccCCccceEE
Confidence 3899999999999999999999999999999999999999999999999999 88 899999999999999999999
Q ss_pred HHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccc
Q 021077 105 VTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIET 184 (317)
Q Consensus 105 l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~ 184 (317)
+.+|+++|.+||+++++||||||.+.++..|||++||..+|+...+|+.+++.|++||++|+|+++++|+|||++|.+.+
T Consensus 107 i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~ 186 (331)
T KOG0374|consen 107 ICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKS 186 (331)
T ss_pred eehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcC
Confidence 99999999999999999999999999999999999999999767999999999999999999999999999999999999
Q ss_pred hhhhhhcccCccCCCCCCccccccCCCCC-CCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCe
Q 021077 185 LDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQK 263 (317)
Q Consensus 185 ~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~ 263 (317)
+++++.+.||.++|+.+.++|++|+||+. ..+|..+.||.++.||++++++||+++++++|||+||++++||+++++.+
T Consensus 187 ~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~ 266 (331)
T KOG0374|consen 187 LDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRK 266 (331)
T ss_pred hHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCce
Confidence 99999999999999999999999999987 69999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecC
Q 021077 264 VVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 300 (317)
Q Consensus 264 ~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 300 (317)
++||||||+||+.++|.||+|.+++++.++|+.+.|.
T Consensus 267 lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 267 LVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred EEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 9999999999999999999999999999999999995
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1e-65 Score=468.98 Aligned_cols=269 Identities=54% Similarity=0.994 Sum_probs=258.2
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHH
Q 021077 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVT 106 (317)
Q Consensus 27 ~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~ 106 (317)
++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.+ +.+++||||||||||++|+|++.
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~----~~~~~vfLGD~VDrG~~s~e~l~ 76 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPP----PDTNYVFLGDYVDRGPFSIEVIL 76 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCC----CCceEEEeCCccCCCCChHHHHH
Confidence 46789999999999999999999999999999999999999999999999987 78999999999999999999999
Q ss_pred HHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchh
Q 021077 107 LLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLD 186 (317)
Q Consensus 107 ~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~ 186 (317)
+++++|..+|.++++||||||.+.++..+||..++..+|+ ..+|+.+.++|++||++++++++++|||||++|.+.+++
T Consensus 77 ~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~ 155 (271)
T smart00156 77 LLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLD 155 (271)
T ss_pred HHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHH
Confidence 9999999999999999999999999999999999999995 789999999999999999998899999999999999999
Q ss_pred hhhhcccCccCCCCCCccccccCCCCC-CCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEE
Q 021077 187 NIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVV 265 (317)
Q Consensus 187 ~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~i 265 (317)
++++++|+.+.+.++.+.|+|||||.. ..+|.+++||.++.||.+++++||+++++++||||||++++||+..++++++
T Consensus 156 ~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~ 235 (271)
T smart00156 156 DIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLV 235 (271)
T ss_pred HHhcccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEE
Confidence 999999999999999999999999964 7889999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecC
Q 021077 266 TIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 300 (317)
Q Consensus 266 ti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 300 (317)
|||||++||+.++|.||++.|+++..++|++|+|.
T Consensus 236 TvfSa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 236 TIFSAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred EEECCcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 99999999999999999999999999999999764
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.6e-63 Score=467.42 Aligned_cols=293 Identities=36% Similarity=0.594 Sum_probs=262.5
Q ss_pred CCcccHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccc----CCeeEeeCCCCCHHHHHHHHH
Q 021077 9 DTTTDLDEQISQLMQC----------KPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQ 74 (317)
Q Consensus 9 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~a~~~~~~e~~~~~~~----~~i~viGDiHG~~~~l~~ll~ 74 (317)
-+.+.++.+|+.+... ..++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~ 86 (377)
T cd07418 7 LTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86 (377)
T ss_pred cCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHH
Confidence 4677899999998544 34799999999999999999999999987 899999999999999999999
Q ss_pred HcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCC--hhhHH
Q 021077 75 IGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWK 152 (317)
Q Consensus 75 ~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~ 152 (317)
..+.++ ..+++||||||||||++|+||+.++++++..+|.++++||||||.+.++..+||..++..+|+. ..+++
T Consensus 87 ~~g~~~---~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~ 163 (377)
T cd07418 87 DAGFPD---QNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYR 163 (377)
T ss_pred HhCCCC---CCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHH
Confidence 999872 3467999999999999999999999999999999999999999999999999999999999975 47999
Q ss_pred HHHHHhhcCCeEEEEeCCEEEEcCCCC---------------------------CCccchhhhhhcccC-ccCCCCC---
Q 021077 153 IFTDLFDYFPLTALVESEIFCLHGGLS---------------------------PSIETLDNIRNFDRV-QEVPHEG--- 201 (317)
Q Consensus 153 ~~~~~f~~lPl~~~v~~~~l~vHgGi~---------------------------~~~~~~~~i~~i~r~-~~~~~~~--- 201 (317)
.+.++|++||++++++++++||||||+ |.+.++++|+.++|+ .+.+..+
T Consensus 164 ~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~ 243 (377)
T cd07418 164 KCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNL 243 (377)
T ss_pred HHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccc
Confidence 999999999999999989999999994 456789999999986 4666555
Q ss_pred CccccccCCCCCCCCCCcC-CCCCccccChHHHHHHHHhCCCcEEEecccc------------cccceEEecC---CeEE
Q 021077 202 PMCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHTNNLKLIARAHQL------------VMDGFNWAHE---QKVV 265 (317)
Q Consensus 202 ~~~dllWsdp~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~------------~~~G~~~~~~---~~~i 265 (317)
.++|+|||||....+|..+ +||.|+.||.+++++||+++++++||||||+ +++||++.++ ++++
T Consensus 244 i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~li 323 (377)
T cd07418 244 IPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLI 323 (377)
T ss_pred cceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEE
Confidence 3689999999987777665 7999999999999999999999999999996 6799999876 9999
Q ss_pred EEEcCCCCc------CCCCCcEEEEEEeCC--CceEEEEeecC-CCCC
Q 021077 266 TIFSAPNYC------YRCGNMASILEVDDC--RSHTFIQFEPA-PRRG 304 (317)
Q Consensus 266 ti~Sa~~y~------~~~~n~~avl~i~~~--~~~~~~~~~~~-~~~~ 304 (317)
|||||++|| +.++|+||++.|+++ ...+|.+|+.+ |+|+
T Consensus 324 TvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (377)
T cd07418 324 TLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPK 371 (377)
T ss_pred EEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCC
Confidence 999999999 678999999999764 57999999988 7664
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=4e-63 Score=460.00 Aligned_cols=275 Identities=40% Similarity=0.746 Sum_probs=252.6
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCC----CCCCCcEEEeeceecCCCC
Q 021077 25 KPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQ----ECPDTNYLFMGDYVDRGYY 100 (317)
Q Consensus 25 ~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~----~~~~~~~vfLGD~vDrG~~ 100 (317)
..++++++.+||++|+++|++||+++++..+++||||||||+++|.++|+..+.++. .....++||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 358999999999999999999999999999999999999999999999999987632 1113579999999999999
Q ss_pred cHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCC-----hhhHHHHHHHhhcCCeEEEEeCCEEEEc
Q 021077 101 SVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTALVESEIFCLH 175 (317)
Q Consensus 101 s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~-----~~~~~~~~~~f~~lPl~~~v~~~~l~vH 175 (317)
|+||+.++++++..+|.++++||||||.+.++..+||..++..+|+. ..++..+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999999865 3688999999999999999999999999
Q ss_pred CCCCCCccchhhhhhcccCc-cCCCCCCccccccCCCCCC---CCCCcCC---CCCc--cccChHHHHHHHHhCCCcEEE
Q 021077 176 GGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDISEQFNHTNNLKLIA 246 (317)
Q Consensus 176 gGi~~~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~---~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~iI 246 (317)
||++|.+.++++++.+.|+. ..+.++.+.|++||||... .+|.+++ ||.| +.||.+++++||+++++++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999986 4456678899999999863 4566655 8888 689999999999999999999
Q ss_pred ecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeec
Q 021077 247 RAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 299 (317)
Q Consensus 247 rGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 299 (317)
||||++++||+..++++++||||||+||+.++|.||++.|+++..++|++++|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999886
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.4e-63 Score=449.88 Aligned_cols=289 Identities=41% Similarity=0.756 Sum_probs=273.2
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcE
Q 021077 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNY 88 (317)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~ 88 (317)
.+.+..+-+.+++.+..+++++..+.|+.++.++|++|++++++++||.|||||||+|.||+++|+..|.+ ..++|
T Consensus 43 ~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~P----A~t~Y 118 (517)
T KOG0375|consen 43 TGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSP----ANTRY 118 (517)
T ss_pred CCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCc----cccee
Confidence 67788999999999999999999999999999999999999999999999999999999999999999998 79999
Q ss_pred EEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEe
Q 021077 89 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVE 168 (317)
Q Consensus 89 vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~ 168 (317)
+|||||||||.+|+||+.+|.+||+.||..+++||||||++.+...+.|..||..+| ...+|+...+.|++||+||..+
T Consensus 119 LFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmN 197 (517)
T KOG0375|consen 119 LFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMN 197 (517)
T ss_pred EeeccccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 6899999999999999999999
Q ss_pred CCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCC-------C-CcCCCCCccccChHHHHHHHHhC
Q 021077 169 SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG-------W-GISPRGAGYTFGQDISEQFNHTN 240 (317)
Q Consensus 169 ~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~-------~-~~~~rg~~~~fg~~~~~~fl~~~ 240 (317)
+.++|||||++|.+.++++|++++|+.++|..+++||+||+||.+.-+ | .++.||.+|.|...++++||+.+
T Consensus 198 qQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~n 277 (517)
T KOG0375|consen 198 QQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNN 277 (517)
T ss_pred CceEEecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999975211 2 34679999999999999999999
Q ss_pred CCcEEEecccccccceEEecCC------eEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEeecCCCC
Q 021077 241 NLKLIARAHQLVMDGFNWAHEQ------KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRR 303 (317)
Q Consensus 241 ~~~~iIrGH~~~~~G~~~~~~~------~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 303 (317)
|+--|||.|+.++.||+..... .+|||||||||.+.++|+||||.-+.| .+.++||+.+|||
T Consensus 278 nLLSIiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHP 345 (517)
T KOG0375|consen 278 NLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHP 345 (517)
T ss_pred CchhhhhhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCC
Confidence 9999999999999999876643 489999999999999999999997654 7899999999998
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-52 Score=386.21 Aligned_cols=294 Identities=30% Similarity=0.593 Sum_probs=260.2
Q ss_pred CCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCC
Q 021077 8 TDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPQEC 83 (317)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~----~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~ 83 (317)
-...+++..+|+++...+++++..++.++.+|+++|+..|++-++ +..+.||||+||.++||.-+|-+.|.|.
T Consensus 115 Pl~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS--- 191 (631)
T KOG0377|consen 115 PLRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPS--- 191 (631)
T ss_pred CcCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCC---
Confidence 345567999999999999999999999999999999999999776 4679999999999999999999999984
Q ss_pred CCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCC--hhhHHHHHHHhhcC
Q 021077 84 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYF 161 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~f~~l 161 (317)
...-|||-||+||||.+|+|+|..|+++...||..+|+-|||||..++|..|||.+|...+|.. ..+...+.++|++|
T Consensus 192 ~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WL 271 (631)
T KOG0377|consen 192 SSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWL 271 (631)
T ss_pred CCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhc
Confidence 6778999999999999999999999999999999999999999999999999999999999953 57889999999999
Q ss_pred CeEEEEeCCEEEEcCCCCCCccchhhhhhcccCc-----cCCC----C-------------CCccccccCCCCCCCCC-C
Q 021077 162 PLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQ-----EVPH----E-------------GPMCDLLWSDPDDRCGW-G 218 (317)
Q Consensus 162 Pl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~-----~~~~----~-------------~~~~dllWsdp~~~~~~-~ 218 (317)
|++.+++.++++||||++.. ..++-+.++.|-. -+|. + ..+.|+|||||....+. .
T Consensus 272 Pi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~p 350 (631)
T KOG0377|consen 272 PIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVP 350 (631)
T ss_pred chhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCc
Confidence 99999999999999999854 3555555554321 1111 0 13578999999986665 4
Q ss_pred cCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEee
Q 021077 219 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFE 298 (317)
Q Consensus 219 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 298 (317)
+.-||.|.+||++.+.+||++++++++||+|++.++||++.++++++|||||+||-..+.|+||++++.......|.||.
T Consensus 351 Nt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~ 430 (631)
T KOG0377|consen 351 NTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQ 430 (631)
T ss_pred ccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHH
Confidence 45699999999999999999999999999999999999999999999999999997778899999999999999999999
Q ss_pred cCCCCCC
Q 021077 299 PAPRRGE 305 (317)
Q Consensus 299 ~~~~~~~ 305 (317)
....+.+
T Consensus 431 a~k~t~~ 437 (631)
T KOG0377|consen 431 AAKQTKR 437 (631)
T ss_pred hhhhhhh
Confidence 7665543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.5e-46 Score=350.50 Aligned_cols=292 Identities=37% Similarity=0.723 Sum_probs=268.8
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCC
Q 021077 10 TTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPQECPD 85 (317)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~----~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~ 85 (317)
+...+..+++.+.....++...+-.|+..++.+++.+++++++ ..++.|+||.||++.++.++++..|.++ ..
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps---~t 242 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPS---ET 242 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCC---Cc
Confidence 3344555665666777888999999999999999999998765 4579999999999999999999999985 67
Q ss_pred CcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEE
Q 021077 86 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTA 165 (317)
Q Consensus 86 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~ 165 (317)
..++|-||++|||..|.|+...+...+..+|+++|++|||||...++..|||..++..+|. ...+..+.+.|..||++.
T Consensus 243 ~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~ 321 (476)
T KOG0376|consen 243 NPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAH 321 (476)
T ss_pred ccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchh
Confidence 8899999999999999999999999999999999999999999999999999999999995 566666679999999999
Q ss_pred EEeCCEEEEcCCCC-CCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcE
Q 021077 166 LVESEIFCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKL 244 (317)
Q Consensus 166 ~v~~~~l~vHgGi~-~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 244 (317)
.++++++.+|||+. +.-..++++++|.|+...|+++.+++++|+||....+..++.||.|..||++++.+||+.++++.
T Consensus 322 ~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~ 401 (476)
T KOG0376|consen 322 LINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDK 401 (476)
T ss_pred hhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHH
Confidence 99999999999984 55567999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEe-CCCceEEEEeecCCCCCC
Q 021077 245 IARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVD-DCRSHTFIQFEPAPRRGE 305 (317)
Q Consensus 245 iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~~~ 305 (317)
|||||+..+.||+..++|+++|+||||+||+..+|.||++.++ ++....+++|+++|++.-
T Consensus 402 i~rshe~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~ 463 (476)
T KOG0376|consen 402 IIRSHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDV 463 (476)
T ss_pred HhhccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCC
Confidence 9999999999999999999999999999999999999999999 689999999999999953
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.9e-35 Score=262.93 Aligned_cols=214 Identities=45% Similarity=0.775 Sum_probs=174.2
Q ss_pred eEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhC
Q 021077 57 TICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 136 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 136 (317)
+|||||||++++|.++|+..+.. +.+++|||||++|||+.+.+++.++++++.. |.++++|+||||.+.+....+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~----~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~ 75 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFP----PNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYG 75 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCC----CCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcC
Confidence 58999999999999999999886 7899999999999999999999999998876 788999999999998877665
Q ss_pred ChHHH--------HHHhCChhhHHHHHHHhhcCCeEEEEeC-CEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccc
Q 021077 137 FYDEC--------LRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 207 (317)
Q Consensus 137 f~~e~--------~~~~~~~~~~~~~~~~f~~lPl~~~v~~-~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dll 207 (317)
+..+. ...+.....+..+.+++..+|+++.++. +++|||||++|.....++.. ..+.+....+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~l 149 (225)
T cd00144 76 FYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLL 149 (225)
T ss_pred CcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeee
Confidence 54321 2333345678888999999999999876 99999999999986655443 233445568899
Q ss_pred cCCCCCCCCC-CcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEE
Q 021077 208 WSDPDDRCGW-GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILE 285 (317)
Q Consensus 208 Wsdp~~~~~~-~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~ 285 (317)
|++|.....+ ..+.++. ++++...|++.++.++||+|||++..++.....+++++|||++.|++..+|..+++.
T Consensus 150 w~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 150 WSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred ecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 9998753332 2222222 889999999999999999999999988766678899999999999877777766653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.97 E-value=3.4e-29 Score=226.07 Aligned_cols=196 Identities=20% Similarity=0.281 Sum_probs=134.9
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCC-----CCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCP-----QECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~-----~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
++++||||||||++.|.++|+++++.. +....+++|||||||||||+|.+|+++++++. .++++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 478999999999999999999988631 11256899999999999999999999999885 34579999999999
Q ss_pred hhhhhhhC-------ChHHHHHHhCC------hhhHHHHHHHhhcCCeEEEEe-CCEEEEcCCCCCCccc--hhhhhhcc
Q 021077 129 RQITQVYG-------FYDECLRKYGN------ANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIET--LDNIRNFD 192 (317)
Q Consensus 129 ~~~~~~~~-------f~~e~~~~~~~------~~~~~~~~~~f~~lPl~~~v~-~~~l~vHgGi~~~~~~--~~~i~~i~ 192 (317)
++++...+ ...++...|.. ..+.+.+.+|++++|++..++ ++++|||||+.|.... .+++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~---- 154 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKV---- 154 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhh----
Confidence 88765432 12344555532 245677899999999988764 6799999999876411 1111
Q ss_pred cCccCCCCCCccccccCC--------CCC-CCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCe
Q 021077 193 RVQEVPHEGPMCDLLWSD--------PDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQK 263 (317)
Q Consensus 193 r~~~~~~~~~~~dllWsd--------p~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~ 263 (317)
...++|++ +.. ...|..+. .+.+.+|.||||+...... ++
T Consensus 155 ----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~~---~~ 203 (245)
T PRK13625 155 ----------QTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRFV---NH 203 (245)
T ss_pred ----------hhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccceec---CC
Confidence 12234432 211 12232211 1346799999999765432 45
Q ss_pred EEEEEcCCCCcCCCCCcEEEEEEeCCC
Q 021077 264 VVTIFSAPNYCYRCGNMASILEVDDCR 290 (317)
Q Consensus 264 ~iti~Sa~~y~~~~~n~~avl~i~~~~ 290 (317)
.+.|+|+..| ++.=+++.+++..
T Consensus 204 ~i~IDtGa~~----gG~Ltal~l~~~~ 226 (245)
T PRK13625 204 TVNIDTGCVF----GGRLTALRYPEME 226 (245)
T ss_pred eEEEECcCcc----CCEEEEEECCCCc
Confidence 7999987543 3444555666543
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=4.5e-28 Score=213.54 Aligned_cols=182 Identities=20% Similarity=0.271 Sum_probs=133.8
Q ss_pred eEeeCCCCCHHHHHHHHHHcCCCC----CCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhh---CCCcEEEECCCchhh
Q 021077 57 TICGDIHGQFHDLAELFQIGGKCP----QECPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YPQRITILRGNHESR 129 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~----~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~---~p~~v~~lrGNHE~~ 129 (317)
+||||||||+++|.++|+.++..+ |..+.+.+|++||+||||+++.++++++++++.+ .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 589999999999999999988632 3447899999999999999999999999999854 456899999999999
Q ss_pred hhhhhhCChH-HHHHHhC--------ChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCC
Q 021077 130 QITQVYGFYD-ECLRKYG--------NANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 200 (317)
Q Consensus 130 ~~~~~~~f~~-e~~~~~~--------~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~ 200 (317)
.+...+.+.. .....+. .......+.+|++.+|+...+ ++++|||||++|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~~------------------- 140 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGPL------------------- 140 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHHH-------------------
Confidence 8875443321 1111110 011234568899999999886 6799999998433
Q ss_pred CCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCC
Q 021077 201 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPN 272 (317)
Q Consensus 201 ~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~ 272 (317)
|++.-... .... .-+...+.++++.++.+++|+||||++.+....+++++++|+++..
T Consensus 141 -------w~r~y~~~----~~~~---~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~ 198 (208)
T cd07425 141 -------WYRGYSKE----TSDK---ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMS 198 (208)
T ss_pred -------HhhHhhhh----hhhc---cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcc
Confidence 33110000 0000 0012457789999999999999999998876688999999998654
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.96 E-value=9.2e-28 Score=219.19 Aligned_cols=220 Identities=19% Similarity=0.308 Sum_probs=146.5
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
|+++||||||||++.|.++|+++++.+ ..+++|||||+|||||+|.+|++++.++. .++++|+||||.+++..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~---~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~ 73 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDP---AKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAV 73 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCC---CCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHh
Confidence 578999999999999999999998642 57899999999999999999999999873 46999999999998876
Q ss_pred hhCCh----HHHHHHhCChhhHHHHHHHhhcCCeEEEE-eCCEEEEcCCCCCCccchhhhhhcccCccCCCCC----Ccc
Q 021077 134 VYGFY----DECLRKYGNANIWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG----PMC 204 (317)
Q Consensus 134 ~~~f~----~e~~~~~~~~~~~~~~~~~f~~lPl~~~v-~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~----~~~ 204 (317)
.++.. .....++......+.+.+|++.+|+...+ .+++++||||++|.+...+.....+.+....... .+.
T Consensus 74 ~~g~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~ 153 (275)
T PRK00166 74 AAGIKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLA 153 (275)
T ss_pred hcCCccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 65543 12334443345567789999999998876 4689999999999985444333222222221111 123
Q ss_pred ccccCCCCCCCCCCcCCCCCc-cccChHHHHH--HHHh-----------------------------CCCcEEEeccccc
Q 021077 205 DLLWSDPDDRCGWGISPRGAG-YTFGQDISEQ--FNHT-----------------------------NNLKLIARAHQLV 252 (317)
Q Consensus 205 dllWsdp~~~~~~~~~~rg~~-~~fg~~~~~~--fl~~-----------------------------~~~~~iIrGH~~~ 252 (317)
.+.|+.|. .|...-.+.. ..+.-+++.+ ||.. ..-..||.||...
T Consensus 154 ~my~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~ 230 (275)
T PRK00166 154 NMYGNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAA 230 (275)
T ss_pred HhcCCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcc
Confidence 33344342 2333322221 1111111111 1111 1235799999998
Q ss_pred ccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeCC
Q 021077 253 MDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDC 289 (317)
Q Consensus 253 ~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~ 289 (317)
..|... ...++.++|+ |.- ++.=..+.++..
T Consensus 231 l~G~~~--~~~~~~LDtG---cvw-gg~Lta~~l~~~ 261 (275)
T PRK00166 231 LEGLTT--PPNIIALDTG---CVW-GGKLTALRLEDK 261 (275)
T ss_pred cCCccC--CCCeEEeecc---ccc-CCeEEEEEeCCC
Confidence 778765 6779999986 422 445566677743
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=3.2e-27 Score=211.92 Aligned_cols=127 Identities=22% Similarity=0.445 Sum_probs=100.4
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCC------CCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCch
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQE------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 127 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 127 (317)
+||.||||||||+++|.++|+++++.+.. .+.+++||||||||||++|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 58999999999999999999999875211 13579999999999999999999999998754 46999999999
Q ss_pred hhhhhhhhCC-------hHHHHHHhC--ChhhHHHHHHHhhcCCeEEEEe-CCEEEEcCCCCCCc
Q 021077 128 SRQITQVYGF-------YDECLRKYG--NANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSI 182 (317)
Q Consensus 128 ~~~~~~~~~f-------~~e~~~~~~--~~~~~~~~~~~f~~lPl~~~v~-~~~l~vHgGi~~~~ 182 (317)
.++++...+- ..++...+. ...+.+.+.+||+.||+...++ ++++|||||+++.+
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9887653321 123334432 2456678899999999988775 47999999987654
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.95 E-value=6.2e-27 Score=208.34 Aligned_cols=120 Identities=23% Similarity=0.325 Sum_probs=94.7
Q ss_pred eEeeCCCCCHHHHHHHHHHcCCCCC----CCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhh
Q 021077 57 TICGDIHGQFHDLAELFQIGGKCPQ----ECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 132 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~~----~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 132 (317)
+||||||||++.|.++|+++++... ..+.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 6999999999999999999876521 114679999999999999999999999998643 4799999999998875
Q ss_pred hhhCC------h-----------HHHHHHhC-ChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCC
Q 021077 133 QVYGF------Y-----------DECLRKYG-NANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 179 (317)
Q Consensus 133 ~~~~f------~-----------~e~~~~~~-~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~ 179 (317)
...+. . .+..+.+. ..+..+.+.+||+.||++... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43221 0 12333332 234567889999999999875 78999999985
No 25
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.95 E-value=5.5e-27 Score=212.45 Aligned_cols=129 Identities=21% Similarity=0.314 Sum_probs=105.5
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
++++||||||||+++|.++|+++++.+ +.++++|+||+|||||+|++|++++.++. +++++|+||||.+++..
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~---~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~ 73 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDP---GQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAV 73 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCC---CCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHH
Confidence 468999999999999999999998753 57899999999999999999999998874 45889999999999887
Q ss_pred hhCCh----HHHHHHhCChhhHHHHHHHhhcCCeEEEEe-CCEEEEcCCCCCCccchhhhh
Q 021077 134 VYGFY----DECLRKYGNANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIR 189 (317)
Q Consensus 134 ~~~f~----~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~-~~~l~vHgGi~~~~~~~~~i~ 189 (317)
..++. ......+......+.+.+|++.+|+....+ .++++||||++|.++..+...
T Consensus 74 ~~g~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~ 134 (279)
T TIGR00668 74 FAGISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKE 134 (279)
T ss_pred hcCCCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHH
Confidence 77652 123333334566788999999999988654 369999999999996444443
No 26
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.94 E-value=3.7e-26 Score=207.29 Aligned_cols=202 Identities=17% Similarity=0.271 Sum_probs=140.1
Q ss_pred CeeEeeCCCCCHHHHHHHHHHcCCC--CCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCC-cEEEECCCchhhhh
Q 021077 55 PVTICGDIHGQFHDLAELFQIGGKC--PQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQI 131 (317)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~--~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~~ 131 (317)
++++||||||+++.|.++|+.+... ......+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999876432 11113568999999999999999999999999988875 68899999998765
Q ss_pred hhhhC-----------------------------------------C----------------------hHHHHHHhCCh
Q 021077 132 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 148 (317)
Q Consensus 132 ~~~~~-----------------------------------------f----------------------~~e~~~~~~~~ 148 (317)
..... | ..++...||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43221 0 12455666532
Q ss_pred --------hhHHHHHHHhhcCCeEEEEeCCE-------------EEEcCCCCCCccchhhhhhcc-cCccCCCCCCcccc
Q 021077 149 --------NIWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 206 (317)
Q Consensus 149 --------~~~~~~~~~f~~lPl~~~v~~~~-------------l~vHgGi~~~~~~~~~i~~i~-r~~~~~~~~~~~dl 206 (317)
.+.+...+|++.||..... +++ +|||||+.|..+..+|.+.+. +-...|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 3455678899999998874 666 999999999998777776543 2222322 378
Q ss_pred ccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEE
Q 021077 207 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEV 286 (317)
Q Consensus 207 lWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i 286 (317)
+|.+... -..++... ..-.+||.||+.. ....+.-|.|+++..|. +...|++.+
T Consensus 238 l~~R~~f----~~~~~~~~--------------~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~---~~l~aa~vl 291 (304)
T cd07421 238 LSGRKNV----WNIPQELA--------------DKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFD---DRPIAAIVL 291 (304)
T ss_pred cccchhh----hcCccccc--------------CCCeEEEECCCCC-----ceecCCEEEEECCCCcC---CceeEEEEe
Confidence 8885532 11222210 0117899999932 33455668899886663 344555554
Q ss_pred e
Q 021077 287 D 287 (317)
Q Consensus 287 ~ 287 (317)
-
T Consensus 292 p 292 (304)
T cd07421 292 P 292 (304)
T ss_pred c
Confidence 4
No 27
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.94 E-value=5.9e-27 Score=211.79 Aligned_cols=124 Identities=24% Similarity=0.344 Sum_probs=102.7
Q ss_pred eeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhh
Q 021077 56 VTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 135 (317)
Q Consensus 56 i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 135 (317)
++||||||||+++|.++|+++++.+ +.+++||+||+|||||+|+||++++++++ +++++|+||||.++++..+
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~---~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~ 73 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDP---AKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAA 73 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCC---CCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhc
Confidence 5899999999999999999998753 57999999999999999999999999986 4699999999999887665
Q ss_pred CCh----HHHHHHhCChhhHHHHHHHhhcCCeEEEEeC-CEEEEcCCCCCCccchh
Q 021077 136 GFY----DECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLD 186 (317)
Q Consensus 136 ~f~----~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~-~~l~vHgGi~~~~~~~~ 186 (317)
+.. .+...++......+.+.+|++++|++..+++ ++++||||++|.+...+
T Consensus 74 g~~~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~ 129 (257)
T cd07422 74 GIKKPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQ 129 (257)
T ss_pred CccccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHH
Confidence 542 1233333334456788999999999998754 89999999999985443
No 28
>PHA02239 putative protein phosphatase
Probab=99.94 E-value=3.1e-26 Score=205.01 Aligned_cols=177 Identities=21% Similarity=0.314 Sum_probs=127.9
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
|++++||||||+++.|.++++.+.... .+.+.+||+|||||||++|.+++..++++.. .+.++++|+||||.++++.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~--~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~ 77 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNER--KPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNI 77 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcC--CCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHH
Confidence 478999999999999999999875421 1368999999999999999999999998754 3457999999999987654
Q ss_pred hhC--------------ChHHHHHHhCCh------------------------------hhHHHHHHHhhcCCeEEEEeC
Q 021077 134 VYG--------------FYDECLRKYGNA------------------------------NIWKIFTDLFDYFPLTALVES 169 (317)
Q Consensus 134 ~~~--------------f~~e~~~~~~~~------------------------------~~~~~~~~~f~~lPl~~~v~~ 169 (317)
... ...+++..|+.. ..+..+.+|++.||+.... +
T Consensus 78 ~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~ 156 (235)
T PHA02239 78 MENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-D 156 (235)
T ss_pred HhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-C
Confidence 211 112455666421 1234556699999999884 8
Q ss_pred CEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecc
Q 021077 170 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAH 249 (317)
Q Consensus 170 ~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH 249 (317)
+++|||||+.|..+..+| ...+++|.+. | .+...+ +.||+||
T Consensus 157 ~~ifVHAGi~p~~~~~~q--------------~~~~llWiR~-----f--~~~~~g-----------------~~vV~GH 198 (235)
T PHA02239 157 KYIFSHSGGVSWKPVEEQ--------------TIDQLIWSRD-----F--QPRKDG-----------------FTYVCGH 198 (235)
T ss_pred CEEEEeCCCCCCCChhhC--------------CHhHeEEecc-----c--CCCCCC-----------------cEEEECC
Confidence 899999999888642222 2367899964 2 111112 7899999
Q ss_pred cccccceEEecCCeEEEEEcCCCC
Q 021077 250 QLVMDGFNWAHEQKVVTIFSAPNY 273 (317)
Q Consensus 250 ~~~~~G~~~~~~~~~iti~Sa~~y 273 (317)
||+..+.... .++.|.|+++..|
T Consensus 199 Tp~~~~~~~~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 199 TPTDSGEVEI-NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCCCcccc-cCCEEEeecCccc
Confidence 9997654332 3457999987544
No 29
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.94 E-value=5.4e-26 Score=201.82 Aligned_cols=181 Identities=17% Similarity=0.175 Sum_probs=122.2
Q ss_pred ccCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhh
Q 021077 52 VKSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 131 (317)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 131 (317)
..+|++||||||||++.|.++|+.+++.+ ..++++||||+|||||+|.+||+++.+ .++++|+||||.+++
T Consensus 15 ~~~ri~vigDIHG~~~~L~~lL~~i~~~~---~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l 85 (218)
T PRK11439 15 QWRHIWLVGDIHGCFEQLMRKLRHCRFDP---WRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMAL 85 (218)
T ss_pred CCCeEEEEEcccCCHHHHHHHHHhcCCCc---ccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHH
Confidence 34599999999999999999999998752 578999999999999999999999865 247899999999988
Q ss_pred hhhhCChHHHHH--------HhCC--hhhHHHHHHHhhcCCeEEEEe---CCEEEEcCCCCCCccchhhhhhcccCccCC
Q 021077 132 TQVYGFYDECLR--------KYGN--ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVP 198 (317)
Q Consensus 132 ~~~~~f~~e~~~--------~~~~--~~~~~~~~~~f~~lPl~~~v~---~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~ 198 (317)
+...+-....+. .... .+....+.+|++.||+...+. +++++||||++.... +... +
T Consensus 86 ~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~--~~~~----~---- 155 (218)
T PRK11439 86 DALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVY--EWQK----D---- 155 (218)
T ss_pred HHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCch--hhhc----c----
Confidence 754321111111 1111 123456678999999987654 479999999743321 1000 0
Q ss_pred CCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCC
Q 021077 199 HEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 273 (317)
Q Consensus 199 ~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y 273 (317)
....+++|.++.....+. .+ ...+.+.||+||||++.... .+..+.|++++-|
T Consensus 156 --~~~~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 156 --VDLHQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred --CCccceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 012457887542211110 00 11245789999999875443 3457999987655
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.93 E-value=1e-24 Score=192.21 Aligned_cols=191 Identities=20% Similarity=0.294 Sum_probs=128.5
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
+|++|||||||++.+|.++++.++..+ ..+.++++||++|||+++.++++++.+ .++++++||||.+.+..
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~---~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~ 71 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDP---ARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDA 71 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCC---CCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhH
Confidence 479999999999999999999987641 478999999999999999999998875 25899999999998876
Q ss_pred hhC--ChHHHHHHhCC--------hhhHHHHHHHhhcCCeEEEEe---CCEEEEcCCCCCCccchhhhhhcccCccCCCC
Q 021077 134 VYG--FYDECLRKYGN--------ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 200 (317)
Q Consensus 134 ~~~--f~~e~~~~~~~--------~~~~~~~~~~f~~lPl~~~v~---~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~ 200 (317)
..+ ...+.+.+.+. ....+.+.+||++||+...++ +++++||||+++... ..... + +....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~ 145 (207)
T cd07424 72 LRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRP 145 (207)
T ss_pred hhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCc
Confidence 544 22223333322 124566888999999998875 369999999865531 11100 0 11122
Q ss_pred CCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCc
Q 021077 201 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNM 280 (317)
Q Consensus 201 ~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~ 280 (317)
....+++|+++........ ...+.++||.|||+++..+.. +..+.|++++-+ .+..
T Consensus 146 ~~~~~~~w~~~~~~~~~~~------------------~~~~~~~iV~GHTh~~~~~~~---~~~i~ID~Gsv~---gg~L 201 (207)
T cd07424 146 EDIEELLWSRTRIQKAQTQ------------------PIKGVDAVVHGHTPVKRPLRL---GNVLYIDTGAVF---DGNL 201 (207)
T ss_pred ccceeeeeccchhhhcCcc------------------ccCCCCEEEECCCCCCcceEE---CCEEEEECCCCC---CCeE
Confidence 3346688986532111000 011347899999998765443 345778876433 3444
Q ss_pred EEE
Q 021077 281 ASI 283 (317)
Q Consensus 281 ~av 283 (317)
+|+
T Consensus 202 t~~ 204 (207)
T cd07424 202 TLL 204 (207)
T ss_pred EEE
Confidence 444
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.91 E-value=5e-23 Score=182.73 Aligned_cols=181 Identities=17% Similarity=0.194 Sum_probs=117.1
Q ss_pred cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhh
Q 021077 53 KSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 132 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 132 (317)
.+|++||||||||+++|.++|+.+.+.+ ..+++|++||+|||||+|.++++++.+ .+++.|+||||.+++.
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~---~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~ 84 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCP---ETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALD 84 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCC---CCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHH
Confidence 4599999999999999999999987542 578999999999999999999998864 2588999999998886
Q ss_pred hhhCChH--------HHHHHhCCh--hhHHHHHHHhhcCCeEEEEe---CCEEEEcCCCCCCccchhhhhhcccCccCCC
Q 021077 133 QVYGFYD--------ECLRKYGNA--NIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPH 199 (317)
Q Consensus 133 ~~~~f~~--------e~~~~~~~~--~~~~~~~~~f~~lPl~~~v~---~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~ 199 (317)
....-.. +........ .......+|++.||+...+. +++++||||++... .....
T Consensus 85 ~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~~---------- 152 (218)
T PRK09968 85 AFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFGK---------- 152 (218)
T ss_pred HHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhcc----------
Confidence 5421111 111111111 12334466999999988764 36899999984321 11000
Q ss_pred CCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHH-HhCCCcEEEecccccccceEEecCCeEEEEEcCCCC
Q 021077 200 EGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 273 (317)
Q Consensus 200 ~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl-~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y 273 (317)
.....+++|.++.....+. .+. ...+.+++|+|||+.+.-... + ..+.|++++.|
T Consensus 153 ~~~~~~~~w~r~~~~~~~~----------------~~~~~~~~~~~vv~GHTh~~~~~~~--~-~~i~IDtGs~~ 208 (218)
T PRK09968 153 EIAESELLWPVDRVQKSLN----------------GELQQINGADYFIFGHMMFDNIQTF--A-NQIYIDTGSPK 208 (218)
T ss_pred ccchhhceeCcHHHhhCcc----------------ccccccCCCCEEEECCCCcCcceeE--C-CEEEEECCCCC
Confidence 0012455786432211110 000 123568999999998643322 2 35788877544
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.48 E-value=2.9e-13 Score=111.82 Aligned_cols=160 Identities=19% Similarity=0.198 Sum_probs=99.6
Q ss_pred CCeeEeeCCCCCHHHH----HHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHH--HHhHhhCCCcEEEECCCch
Q 021077 54 SPVTICGDIHGQFHDL----AELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHE 127 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l----~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~l~~~~p~~v~~lrGNHE 127 (317)
+||+++||+|+..... ..+.+..... +.+.+|++||+++++..+.+..... .......+..+++++||||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~----~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 76 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAEN----KPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHD 76 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHT----TTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTS
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccC----CCCEEEeeccccccccccccchhhhccchhhhhccccccccccccc
Confidence 3799999999999987 3333333333 5789999999999999887766654 4444445567999999999
Q ss_pred hhhhhhhhCChHHHHH---------------------------------HhCChhhHHHHHHHhhcCCeEEEEeCCEEEE
Q 021077 128 SRQITQVYGFYDECLR---------------------------------KYGNANIWKIFTDLFDYFPLTALVESEIFCL 174 (317)
Q Consensus 128 ~~~~~~~~~f~~e~~~---------------------------------~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~v 174 (317)
................ .............+.............++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 156 (200)
T PF00149_consen 77 YYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFT 156 (200)
T ss_dssp SHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEE
T ss_pred cceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEE
Confidence 9875543221111100 0000111122222333333334445579999
Q ss_pred cCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEeccccc
Q 021077 175 HGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 252 (317)
Q Consensus 175 HgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~ 252 (317)
|.++.+........ .......+.+..+++..++++++.||++.
T Consensus 157 H~p~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 157 HHPPYSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp SSSSSTTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred ecCCCCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 99886654221110 11234567888999999999999999986
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.47 E-value=1.8e-12 Score=108.63 Aligned_cols=59 Identities=20% Similarity=0.362 Sum_probs=48.3
Q ss_pred CeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 55 PVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
|+.++||+||+...+.++++.+.. .+.++++||++++++.+. ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~------~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD------VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC------CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 588999999999999999998653 489999999999998655 122 23599999999975
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.44 E-value=3.4e-12 Score=110.06 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=55.3
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCC--------cHHHHHHHHHhHhhCCCcEEEECCC
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGN 125 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~l~~~~p~~v~~lrGN 125 (317)
+|+.++||+||++.++.++++.+... +.+.++++||++|+|+. +.++++.+.++. ..+++++||
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~----~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GN 72 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQS----GADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGN 72 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhc----CCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccC
Confidence 58999999999999999999887554 57899999999999873 455666665432 359999999
Q ss_pred chhhh
Q 021077 126 HESRQ 130 (317)
Q Consensus 126 HE~~~ 130 (317)
||...
T Consensus 73 hD~~~ 77 (182)
T PRK09453 73 CDSEV 77 (182)
T ss_pred Ccchh
Confidence 99753
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.39 E-value=5.6e-12 Score=104.99 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=86.2
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
|||+++||+|++...+.++++.+. ..+.++++||++++ .++++.+... .+++++||||......
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~------~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~ 64 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYIN------EPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPN 64 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHT------TESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHS
T ss_pred CEEEEEeCCCCChhHHHHHHHHhc------CCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchh
Confidence 589999999999999999999882 46899999999994 6667666554 3999999999754332
Q ss_pred hhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCC
Q 021077 134 VYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 213 (317)
Q Consensus 134 ~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~ 213 (317)
.... .. +.......+. ..+++++||.+...
T Consensus 65 ~~~~-----------~~------~~~~~~~~~~-~~~i~~~H~~~~~~-------------------------------- 94 (156)
T PF12850_consen 65 ENDE-----------EY------LLDALRLTID-GFKILLSHGHPYDV-------------------------------- 94 (156)
T ss_dssp EECT-----------CS------SHSEEEEEET-TEEEEEESSTSSSS--------------------------------
T ss_pred hhhc-----------cc------cccceeeeec-CCeEEEECCCCccc--------------------------------
Confidence 2110 00 2222111111 34799999864321
Q ss_pred CCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcC
Q 021077 214 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSA 270 (317)
Q Consensus 214 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa 270 (317)
..+.+.+.+.+...+.++++.||++.+.-.+ ..+..+++..|.
T Consensus 95 -------------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 95 -------------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp -------------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred -------------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 0223456677778999999999999854443 334455555554
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.37 E-value=8.9e-12 Score=104.96 Aligned_cols=64 Identities=16% Similarity=0.210 Sum_probs=48.5
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
+++.++||+||++.++..+++.....+ +.+.++++||++ +.+++..+.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~---~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLES---NVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhcc---CCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 579999999999988776666554321 468999999998 456777765542 2499999999973
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.27 E-value=8.2e-11 Score=105.06 Aligned_cols=158 Identities=19% Similarity=0.214 Sum_probs=99.6
Q ss_pred CeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhh--
Q 021077 55 PVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT-- 132 (317)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~-- 132 (317)
+|+++|||||++.... .+.+... ..|.++++||+++. +.+++..+.++. + .+++++||||.+...
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~----~pD~Vl~~GDi~~~---~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~ 68 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLL----QPDLVLFVGDFGNE---SVQLVRAISSLP--L--PKAVILGNHDAWYDATF 68 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhcc----CCCEEEECCCCCcC---hHHHHHHHHhCC--C--CeEEEcCCCcccccccc
Confidence 6899999999987632 1222222 45899999999863 567777665542 3 489999999975432
Q ss_pred --h--------------------------------hhCC--------h-HHHHHHhCChhhHHHHHHHhhcCCeEEEEeC
Q 021077 133 --Q--------------------------------VYGF--------Y-DECLRKYGNANIWKIFTDLFDYFPLTALVES 169 (317)
Q Consensus 133 --~--------------------------------~~~f--------~-~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~ 169 (317)
. ..+| . .++...|+..+..+.+...+++++.+.....
T Consensus 69 ~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~ 148 (238)
T cd07397 69 RKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLP 148 (238)
T ss_pred cchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCC
Confidence 0 0000 0 1456667666778888888888864433334
Q ss_pred CEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCC----CcEE
Q 021077 170 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNN----LKLI 245 (317)
Q Consensus 170 ~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~i 245 (317)
++++.|+++.......++ .| ...|... +-.+|...+.+.++... .+++
T Consensus 149 ~VliaH~~~~G~g~~~~~---------------~c---------g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~ 200 (238)
T cd07397 149 LILLAHNGPSGLGSDAED---------------PC---------GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLV 200 (238)
T ss_pred eEEEeCcCCcCCCccccc---------------cc---------ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEE
Confidence 799999998544311110 01 1223221 22467777766665544 7999
Q ss_pred Eecccccc
Q 021077 246 ARAHQLVM 253 (317)
Q Consensus 246 IrGH~~~~ 253 (317)
+.||.+..
T Consensus 201 ~fGH~H~~ 208 (238)
T cd07397 201 VFGHMHHR 208 (238)
T ss_pred EeCCccCc
Confidence 99999865
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.26 E-value=5.2e-11 Score=97.62 Aligned_cols=118 Identities=20% Similarity=0.200 Sum_probs=78.3
Q ss_pred CeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcH--HHHHHHHHhHhhCCCcEEEECCCchhhhhh
Q 021077 55 PVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYPQRITILRGNHESRQIT 132 (317)
Q Consensus 55 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 132 (317)
++.++||+||++. ..... ..+.+|++||+++++..+- +.++++.+++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~----~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIP----DGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCC----CCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-
Confidence 5899999999987 11222 5689999999999886432 2444444332 22 36789999996411
Q ss_pred hhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCC
Q 021077 133 QVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD 212 (317)
Q Consensus 133 ~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~ 212 (317)
.-+.+++++||.+.+.. +..+.
T Consensus 66 ---------------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~--- 87 (135)
T cd07379 66 ---------------------------------PEDTDILVTHGPPYGHL----------------------DLVSS--- 87 (135)
T ss_pred ---------------------------------CCCCEEEEECCCCCcCc----------------------ccccc---
Confidence 11347899998542211 00000
Q ss_pred CCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceE
Q 021077 213 DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 257 (317)
Q Consensus 213 ~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 257 (317)
....|...+.+++++.+.++++.||++.+.|++
T Consensus 88 ------------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 ------------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred ------------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123566788888999999999999999988876
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.12 E-value=5.4e-09 Score=92.99 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=57.8
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
++|.++||+||++..+.++++.+... +.|.+|++||++++|+..-++..++..+.... ..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~----~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPET----GADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhc----CCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 57999999999999999999877544 56899999999999976666777666664332 2499999999975
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.07 E-value=6.1e-09 Score=89.61 Aligned_cols=126 Identities=19% Similarity=0.282 Sum_probs=80.4
Q ss_pred CeeEeeCCC-CCHH-----HHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 55 PVTICGDIH-GQFH-----DLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 55 ~i~viGDiH-G~~~-----~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
+|.||||.| |.-. .+.++++. . +.+.++.+||+++ .+++.++..+. ..++.++||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~----~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---G----KIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---C----CCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCc
Confidence 478999999 6533 23444433 3 4689999999987 67777776552 248999999996
Q ss_pred hhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEE--EeC-CEEEEcCCCCCCccchhhhhhcccCccCCCCCCccc
Q 021077 129 RQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTAL--VES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCD 205 (317)
Q Consensus 129 ~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~--v~~-~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~d 205 (317)
.. .+|.... +++ +++++||-.-..
T Consensus 65 ~~-----------------------------~lp~~~~~~~~g~~i~l~HG~~~~~------------------------ 91 (178)
T cd07394 65 NL-----------------------------NYPETKVITVGQFKIGLIHGHQVVP------------------------ 91 (178)
T ss_pred cc-----------------------------cCCCcEEEEECCEEEEEEECCcCCC------------------------
Confidence 31 3343333 233 899999842100
Q ss_pred cccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCC
Q 021077 206 LLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 271 (317)
Q Consensus 206 llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~ 271 (317)
|. ..+.+.++.+..+.++++.|||+.+.- ....+..+++-.|..
T Consensus 92 --~~-------------------~~~~~~~~~~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv~ 135 (178)
T cd07394 92 --WG-------------------DPDSLAALQRQLDVDILISGHTHKFEA-FEHEGKFFINPGSAT 135 (178)
T ss_pred --CC-------------------CHHHHHHHHHhcCCCEEEECCCCcceE-EEECCEEEEECCCCC
Confidence 00 123445566678889999999998643 233345556666654
No 41
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.05 E-value=6.2e-10 Score=100.30 Aligned_cols=215 Identities=14% Similarity=0.119 Sum_probs=107.4
Q ss_pred CCeeEeeCCCCCH------HHHHHHHHHcCCCCCCCCCCcEEEeeceecC--C-----CCcHHHHHHHHHhHhhCCCcEE
Q 021077 54 SPVTICGDIHGQF------HDLAELFQIGGKCPQECPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYPQRIT 120 (317)
Q Consensus 54 ~~i~viGDiHG~~------~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~l~~~~p~~v~ 120 (317)
|++++|||+|... ..+.+.|+.... ..+.++++||++|. | +...+++.++.++... +-.++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~-----~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~ 74 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEAR-----QADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCY 74 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhc-----cCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEE
Confidence 5799999999542 234445543221 46899999999985 2 2245667777777643 23599
Q ss_pred EECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeC-CEEEEcCCCCCCcc-chhhhhhcccCc---
Q 021077 121 ILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIE-TLDNIRNFDRVQ--- 195 (317)
Q Consensus 121 ~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~-~~l~vHgGi~~~~~-~~~~i~~i~r~~--- 195 (317)
++.||||..... ...+..+. ..+.. |....+++ +++++||-..+.-. .....+++-|-.
T Consensus 75 ~v~GNHD~~~~~-------~~~~~~g~--------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~ 138 (241)
T PRK05340 75 FMHGNRDFLLGK-------RFAKAAGM--------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQ 138 (241)
T ss_pred EEeCCCchhhhH-------HHHHhCCC--------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHH
Confidence 999999974311 11111110 11111 23333344 69999998653211 111111111100
Q ss_pred cCCCCCCccccccCCCCCCC-CCCcCCCCCcc--ccChHHHHHHHHhCCCcEEEecccccccceEEecCC---eEEEEEc
Q 021077 196 EVPHEGPMCDLLWSDPDDRC-GWGISPRGAGY--TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQ---KVVTIFS 269 (317)
Q Consensus 196 ~~~~~~~~~dllWsdp~~~~-~~~~~~rg~~~--~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~---~~iti~S 269 (317)
......+....+|-.+.-.. .-..+...... ....+.+.+.++..+++++|.||++.+.-.....++ +.+.+.+
T Consensus 139 ~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgd 218 (241)
T PRK05340 139 WLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGD 218 (241)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCC
Confidence 00000000000000000000 00000011111 234567888899999999999999986544333332 2344432
Q ss_pred CCCCcCCCCCcEEEEEEeCCCceEEEEee
Q 021077 270 APNYCYRCGNMASILEVDDCRSHTFIQFE 298 (317)
Q Consensus 270 a~~y~~~~~n~~avl~i~~~~~~~~~~~~ 298 (317)
. ...+.++.++++ ..+++.+.
T Consensus 219 w-------~~~~~~~~~~~~-~~~~~~~~ 239 (241)
T PRK05340 219 W-------HEQGSVLKVDAD-GVELIPFP 239 (241)
T ss_pred C-------CCCCeEEEEECC-ceEEEeCC
Confidence 2 123678888876 46666553
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.00 E-value=7.1e-09 Score=88.88 Aligned_cols=65 Identities=22% Similarity=0.290 Sum_probs=46.1
Q ss_pred eeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-HHHHHHHHHhHhhCCCcEEEECCCchhhh
Q 021077 56 VTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYPQRITILRGNHESRQ 130 (317)
Q Consensus 56 i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 130 (317)
|.++||+||++..+.. ...... +.|.+|++||+.++|... .+.+..+.+ .+..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~----~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAE----EADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhcc----CCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 323223 568999999999998753 333333322 2334999999999754
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.95 E-value=9.2e-09 Score=81.76 Aligned_cols=117 Identities=21% Similarity=0.307 Sum_probs=81.1
Q ss_pred eEeeCCCCCHHHHHHHH--HHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhh
Q 021077 57 TICGDIHGQFHDLAELF--QIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 134 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll--~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~ 134 (317)
+++||+|+......... ...... ..+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~----~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAE----KPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhccc----CCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-------
Confidence 47999999999887764 222223 56889999999999988766554422222334456999999999
Q ss_pred hCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCC
Q 021077 135 YGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR 214 (317)
Q Consensus 135 ~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 214 (317)
++++|+++.+...... +.
T Consensus 70 ------------------------------------i~~~H~~~~~~~~~~~---------------------~~----- 87 (131)
T cd00838 70 ------------------------------------ILLTHGPPYDPLDELS---------------------PD----- 87 (131)
T ss_pred ------------------------------------EEEeccCCCCCchhhc---------------------cc-----
Confidence 8999987654421100 00
Q ss_pred CCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceE
Q 021077 215 CGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 257 (317)
Q Consensus 215 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 257 (317)
...........+...+.+++|.||++....+.
T Consensus 88 -----------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -----------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -----------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00145667778888999999999999865544
No 44
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.87 E-value=5.9e-08 Score=80.00 Aligned_cols=117 Identities=21% Similarity=0.189 Sum_probs=74.4
Q ss_pred eeEeeCCCCCHHH----------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc--HHHHHHHHHhHhhCCCcEEEEC
Q 021077 56 VTICGDIHGQFHD----------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITILR 123 (317)
Q Consensus 56 i~viGDiHG~~~~----------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~lr 123 (317)
|+.++|+|=.... +.++++..... +.+.++++||+++.|... .+...++..+.... ..+++++
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~----~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~ 75 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKAL----DPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVP 75 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhcc----CCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeC
Confidence 5688999942221 11234444433 578999999999988642 12334444443321 2599999
Q ss_pred CCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCc
Q 021077 124 GNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 203 (317)
Q Consensus 124 GNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~ 203 (317)
||||. ++++|..+.+...
T Consensus 76 GNHD~------------------------------------------iv~~Hhp~~~~~~-------------------- 93 (144)
T cd07400 76 GNHDV------------------------------------------IVVLHHPLVPPPG-------------------- 93 (144)
T ss_pred CCCeE------------------------------------------EEEecCCCCCCCc--------------------
Confidence 99997 7899976533210
Q ss_pred cccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceE
Q 021077 204 CDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 257 (317)
Q Consensus 204 ~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 257 (317)
.+.... .+.+.+.+++++.+++++++||++.+..+.
T Consensus 94 ------------~~~~~~------~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 94 ------------SGRERL------LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ------------cccccC------CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 000000 145678889999999999999999865544
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.85 E-value=3.6e-08 Score=80.34 Aligned_cols=107 Identities=18% Similarity=0.094 Sum_probs=73.5
Q ss_pred eEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhC
Q 021077 57 TICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 136 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 136 (317)
.|+||.||..+.+.++.... . +.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~----~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D--------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--E----GVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD--------- 56 (129)
T ss_pred CeeccccCccccchHHHhhC--C----CCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc---------
Confidence 48999999977777766652 2 568999999973 34555555541 123889999999
Q ss_pred ChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCC
Q 021077 137 FYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 216 (317)
Q Consensus 137 f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 216 (317)
-+++++|+-+.+.. +..
T Consensus 57 --------------------------------~~Ilv~H~pp~~~~-------------------------~~~------ 73 (129)
T cd07403 57 --------------------------------VDILLTHAPPAGIG-------------------------DGE------ 73 (129)
T ss_pred --------------------------------cCEEEECCCCCcCc-------------------------Ccc------
Confidence 47899997421110 000
Q ss_pred CCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceE
Q 021077 217 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 257 (317)
Q Consensus 217 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 257 (317)
+ ...-|.+.+.++++..+.++++.||++.+..+.
T Consensus 74 -----~--~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 -----D--FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -----c--ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 011345677888888899999999999876655
No 46
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.83 E-value=1.6e-07 Score=80.11 Aligned_cols=161 Identities=17% Similarity=0.126 Sum_probs=98.2
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
++|.|+||.||...+..+.++..... +.+.+|.+||++..... ..+.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~----~~d~vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~~~- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLE----KVDAVIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEVDQ- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhc----CCCEEEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcccc-
Confidence 67999999999997655555555544 56889999999876541 11111 0224699999999975322
Q ss_pred hhCChHHHHHHhCChhhHHHHHHHhhcCC--eEEEEe-CCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCC
Q 021077 134 VYGFYDECLRKYGNANIWKIFTDLFDYFP--LTALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 210 (317)
Q Consensus 134 ~~~f~~e~~~~~~~~~~~~~~~~~f~~lP--l~~~v~-~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsd 210 (317)
..+| ....++ -+++++||....-
T Consensus 69 -------------------------~~~p~~~~~~~~g~ki~l~HGh~~~~----------------------------- 94 (172)
T COG0622 69 -------------------------EELPEELVLEVGGVKIFLTHGHLYFV----------------------------- 94 (172)
T ss_pred -------------------------ccCChhHeEEECCEEEEEECCCcccc-----------------------------
Confidence 1122 133444 3899999954210
Q ss_pred CCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcEEEEEEeC-C
Q 021077 211 PDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD-C 289 (317)
Q Consensus 211 p~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~-~ 289 (317)
......++.+.+..+++++|.|||+.+.=.+ ..+-.+++-.|.+.+- +++.++++.++. +
T Consensus 95 ----------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~-~~~i~~vNPGS~s~pr--~~~~~sy~il~~~~ 155 (172)
T COG0622 95 ----------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEK-VGGILLVNPGSVSGPR--GGNPASYAILDVDN 155 (172)
T ss_pred ----------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEE-ECCEEEEcCCCcCCCC--CCCCcEEEEEEcCC
Confidence 0112345566677789999999999864333 2233345555655542 234445555543 4
Q ss_pred CceEEEEeecC
Q 021077 290 RSHTFIQFEPA 300 (317)
Q Consensus 290 ~~~~~~~~~~~ 300 (317)
..+....++..
T Consensus 156 ~~~~~~~~~~~ 166 (172)
T COG0622 156 LEVEVLFLERD 166 (172)
T ss_pred CEEEEEEeecc
Confidence 56766666543
No 47
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.82 E-value=5e-09 Score=88.71 Aligned_cols=67 Identities=21% Similarity=0.134 Sum_probs=46.4
Q ss_pred eeEeeCCCCCHHHHHHHHH-HcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 56 VTICGDIHGQFHDLAELFQ-IGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 56 i~viGDiHG~~~~l~~ll~-~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
+.++||+|++.......+. ..... +.+.++++||+++++....... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~----~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAP----DADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCC----CCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 4689999999877765542 22222 5788999999999887654443 22222 2334599999999986
No 48
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.76 E-value=7e-07 Score=79.04 Aligned_cols=192 Identities=18% Similarity=0.163 Sum_probs=101.3
Q ss_pred CeeEeeCCCCC----HHHHH----HHHHHcCCCCCCCCCCcEEEeeceecCCCCcH--H-HHHHHHHhH-hhCCCcEEEE
Q 021077 55 PVTICGDIHGQ----FHDLA----ELFQIGGKCPQECPDTNYLFMGDYVDRGYYSV--E-TVTLLVALK-VRYPQRITIL 122 (317)
Q Consensus 55 ~i~viGDiHG~----~~~l~----~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~--e-vl~~l~~l~-~~~p~~v~~l 122 (317)
+++++||+|-- ...+. .+++.+... ..+.+|++||+++.+.... + ....+..+. ...| ++.+
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~----~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~ 75 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEAL----NIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVL 75 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHc----CCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEE
Confidence 58999999952 22332 333443333 4688999999999987432 2 223333333 1233 8899
Q ss_pred CCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCC
Q 021077 123 RGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 202 (317)
Q Consensus 123 rGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~ 202 (317)
+||||.... ..+. ...+..+.+.+.++..|- ..-++++|--+.+...
T Consensus 76 ~GNHD~~~~-ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------- 122 (214)
T cd07399 76 AGNHDLVLA-LEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------- 122 (214)
T ss_pred CCCCcchhh-CCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC-------------------
Confidence 999994321 1111 023344555566655431 1247888864322110
Q ss_pred ccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhC-CCcEEEecccccccceEEe-----cCCeEEEEEcCCCCcCC
Q 021077 203 MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN-NLKLIARAHQLVMDGFNWA-----HEQKVVTIFSAPNYCYR 276 (317)
Q Consensus 203 ~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~iIrGH~~~~~G~~~~-----~~~~~iti~Sa~~y~~~ 276 (317)
|.+. ...| .....+...+.+.++++ +++.++.||.+.. +.... .++.+..+.+....-..
T Consensus 123 -----~~~~--~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~ 188 (214)
T cd07399 123 -----RPDS--IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPN 188 (214)
T ss_pred -----cCcc--cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCC
Confidence 1000 0001 00112345677888887 8999999999864 22222 13334444432221112
Q ss_pred CCCcE-EEEEEeCC-CceEEEEeec
Q 021077 277 CGNMA-SILEVDDC-RSHTFIQFEP 299 (317)
Q Consensus 277 ~~n~~-avl~i~~~-~~~~~~~~~~ 299 (317)
.+|.. .++++++. ..+.+.+|-|
T Consensus 189 ~g~~~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 189 GGNGFLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred CCcceEEEEEEecCCCEEEEEeCCC
Confidence 23322 67778764 5788877765
No 49
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.76 E-value=8.9e-07 Score=77.58 Aligned_cols=192 Identities=20% Similarity=0.244 Sum_probs=116.2
Q ss_pred cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeecee--cCCCCcHHHHHH--HHHhHhhCCCcEEEECCCchh
Q 021077 53 KSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYV--DRGYYSVETVTL--LVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~v--DrG~~s~evl~~--l~~l~~~~p~~v~~lrGNHE~ 128 (317)
.+++..+.|+||.++.+.+++..+... ..+.+|+.||+. +.|+.-. +.+. +..++.. .-.++.++||.|.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~----~~D~lviaGDlt~~~~~~~~~-~~~~~~~e~l~~~-~~~v~avpGNcD~ 76 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADI----RADLLVIAGDLTYFHFGPKEV-AEELNKLEALKEL-GIPVLAVPGNCDP 76 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhc----cCCEEEEecceehhhcCchHH-HHhhhHHHHHHhc-CCeEEEEcCCCCh
Confidence 468999999999999999999988866 578999999999 8877422 2222 3444322 2459999999998
Q ss_pred hhhhhhh-----------------CChH---------HHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCc
Q 021077 129 RQITQVY-----------------GFYD---------ECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSI 182 (317)
Q Consensus 129 ~~~~~~~-----------------~f~~---------e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~ 182 (317)
..+.... +|.. .+...|.++.++.....++...-- ..+++..|+-+-...
T Consensus 77 ~~v~~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~----~~~Il~~HaPP~gt~ 152 (226)
T COG2129 77 PEVIDVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN----PVNILLTHAPPYGTL 152 (226)
T ss_pred HHHHHHHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC----cceEEEecCCCCCcc
Confidence 6543211 0000 011122222333333333332210 011555665221111
Q ss_pred cchhhhhhcccCccCCCCCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCC
Q 021077 183 ETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQ 262 (317)
Q Consensus 183 ~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~ 262 (317)
.| .+.| -.--|.++++++.+..+-.+.++||-+...|+...-+
T Consensus 153 ---------------------~d--------------~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~- 195 (226)
T COG2129 153 ---------------------LD--------------TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN- 195 (226)
T ss_pred ---------------------cc--------------CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC-
Confidence 00 1112 0126789999999999999999999999889876433
Q ss_pred eEEEEEcCCCCcCCCCCcEEEEEEeCCCceEEEEe
Q 021077 263 KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQF 297 (317)
Q Consensus 263 ~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~ 297 (317)
||+-.|+- .+..+.|++.++++ .+...+|
T Consensus 196 ---TivVNPG~--~~~g~yA~i~l~~~-~Vk~~~~ 224 (226)
T COG2129 196 ---TIVVNPGP--LGEGRYALIELEKE-VVKLEQF 224 (226)
T ss_pred ---eEEECCCC--ccCceEEEEEecCc-EEEEEEe
Confidence 33333333 23446799998876 6666665
No 50
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.74 E-value=2.3e-08 Score=81.75 Aligned_cols=143 Identities=46% Similarity=0.780 Sum_probs=113.9
Q ss_pred hhhhhCChHHHHHHhCChhhHHH---HHHHhhcCCeEEEEeC-CEEEEcCCCCCCc-cchhhhhhcccCc--cCCCCCCc
Q 021077 131 ITQVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPM 203 (317)
Q Consensus 131 ~~~~~~f~~e~~~~~~~~~~~~~---~~~~f~~lPl~~~v~~-~~l~vHgGi~~~~-~~~~~i~~i~r~~--~~~~~~~~ 203 (317)
+...+++..++...++....|.. ..++|+.+|+.+.+.. .++|.|+++++.+ ...++++.+.|.. .++..+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 34456666666666644334555 8999999999998888 8999999999976 6778888777766 77778888
Q ss_pred cccccCCCCC--CCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCc
Q 021077 204 CDLLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYC 274 (317)
Q Consensus 204 ~dllWsdp~~--~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 274 (317)
.+.+|+++.. ...|.+.++|.+..+ .+....|...+..+.+.++|.....++.....+..+|.++++++|
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 8889998874 678988888888777 677888887777777999999998888777665789999999886
No 51
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.65 E-value=8.1e-08 Score=86.35 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=48.4
Q ss_pred CeeEeeCCCCCH------HHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 55 PVTICGDIHGQF------HDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 55 ~i~viGDiHG~~------~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
+|.+++|+|.++ ..+.++++.+... ..+.+|++||++++.+.+.+.+..+.++ .+..+++++||||.
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~----~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~ 73 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ----KIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDM 73 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc----CCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCC
Confidence 588999999763 2355666666544 5789999999999876555555555442 22349999999996
Q ss_pred h
Q 021077 129 R 129 (317)
Q Consensus 129 ~ 129 (317)
.
T Consensus 74 ~ 74 (239)
T TIGR03729 74 L 74 (239)
T ss_pred C
Confidence 4
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.65 E-value=2e-07 Score=85.53 Aligned_cols=71 Identities=20% Similarity=0.172 Sum_probs=52.7
Q ss_pred cCCeeEeeCCCCC----HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCC-C-CcHHHHHHHHHhHhhCCCcEEEECCCc
Q 021077 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRG-Y-YSVETVTLLVALKVRYPQRITILRGNH 126 (317)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG-~-~s~evl~~l~~l~~~~p~~v~~lrGNH 126 (317)
..+|++++|+|.. ...+.++++..... ..|.++++||++|.+ + ...++...+..++...| ++.+.|||
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~----~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNH 122 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQ----KPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNH 122 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhc----CCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCC
Confidence 3689999999976 55577777766544 568999999999954 2 23345666777765554 99999999
Q ss_pred hhh
Q 021077 127 ESR 129 (317)
Q Consensus 127 E~~ 129 (317)
|..
T Consensus 123 D~~ 125 (271)
T PRK11340 123 DRP 125 (271)
T ss_pred Ccc
Confidence 974
No 53
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.63 E-value=1.5e-07 Score=84.31 Aligned_cols=68 Identities=9% Similarity=0.106 Sum_probs=43.1
Q ss_pred eeEeeCCCCCH------HHHHHHHHHcCCCCCCCCCCcEEEeeceecCC--C---C--cHHHHHHHHHhHhhCCCcEEEE
Q 021077 56 VTICGDIHGQF------HDLAELFQIGGKCPQECPDTNYLFMGDYVDRG--Y---Y--SVETVTLLVALKVRYPQRITIL 122 (317)
Q Consensus 56 i~viGDiHG~~------~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG--~---~--s~evl~~l~~l~~~~p~~v~~l 122 (317)
++++||+|... ..+.+.+..... ..+.++++||++|.. . . ..++...+..++.. +..++++
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-----~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v 74 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-----KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFM 74 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-----cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEE
Confidence 36899999543 123333333211 358999999999952 1 1 13455666666543 3459999
Q ss_pred CCCchhh
Q 021077 123 RGNHESR 129 (317)
Q Consensus 123 rGNHE~~ 129 (317)
+||||..
T Consensus 75 ~GNHD~~ 81 (231)
T TIGR01854 75 HGNRDFL 81 (231)
T ss_pred cCCCchh
Confidence 9999974
No 54
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.50 E-value=2.9e-06 Score=77.57 Aligned_cols=72 Identities=19% Similarity=0.240 Sum_probs=49.2
Q ss_pred CeeEeeCCC-CC------------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCC-cHHHHHHHHHhHhhCCCcEE
Q 021077 55 PVTICGDIH-GQ------------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRIT 120 (317)
Q Consensus 55 ~i~viGDiH-G~------------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~l~~~~p~~v~ 120 (317)
|+.+|||+| +. ...+.++++.+... ..+-+|++||+++.|.. +.+-+..+.+.....+-.++
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~----~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~ 77 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE----SLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVH 77 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC----CCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEE
Confidence 689999999 22 35566777776544 46889999999998863 33444444443333333499
Q ss_pred EECCCchhhh
Q 021077 121 ILRGNHESRQ 130 (317)
Q Consensus 121 ~lrGNHE~~~ 130 (317)
.++||||...
T Consensus 78 ~v~GNHD~~~ 87 (267)
T cd07396 78 HVLGNHDLYN 87 (267)
T ss_pred EecCcccccc
Confidence 9999999853
No 55
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.49 E-value=3e-06 Score=84.30 Aligned_cols=118 Identities=18% Similarity=0.271 Sum_probs=61.6
Q ss_pred cCCeeEeeCCC-CCH----HHHHHHHHHcC-CCC----CCCCCCcEEEeeceecC-CCCc---------------HHHHH
Q 021077 53 KSPVTICGDIH-GQF----HDLAELFQIGG-KCP----QECPDTNYLFMGDYVDR-GYYS---------------VETVT 106 (317)
Q Consensus 53 ~~~i~viGDiH-G~~----~~l~~ll~~~~-~~~----~~~~~~~~vfLGD~vDr-G~~s---------------~evl~ 106 (317)
+.++++++|+| |.. ..+..+++.+. ... .....+.+|++||++|. |..+ -++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46799999999 653 22344444332 110 01145799999999994 3211 13444
Q ss_pred HHHHhHhhCCCcEEEECCCchhhhhhhhh-CChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeC-CEEEEcCCC
Q 021077 107 LLVALKVRYPQRITILRGNHESRQITQVY-GFYDECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGL 178 (317)
Q Consensus 107 ~l~~l~~~~p~~v~~lrGNHE~~~~~~~~-~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~-~~l~vHgGi 178 (317)
+|.++... -.|++++||||........ .+.......+.. .-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~~~--i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIPED--IKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhhcC--CeEEEecCCCcchhhccCCCCccHHHHHhcCc-----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 45544332 2499999999976432211 111111111110 01223333 55444554 789999853
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.49 E-value=1.7e-05 Score=72.07 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=36.2
Q ss_pred hHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCCcE-EEEEEeCCC
Q 021077 230 QDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMA-SILEVDDCR 290 (317)
Q Consensus 230 ~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~-avl~i~~~~ 290 (317)
.+.+.+.+++.+++.+++||++....... ++--..+-+++.++....+.| .++.++++.
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 35677788899999999999998665432 332222223334333334444 577887553
No 57
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.47 E-value=2.4e-06 Score=74.53 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=44.1
Q ss_pred CCeeEeeCCCCCHH-----------HHHHHHH-HcCCCCCCCCCCcEEEeeceecCCCCc---HHHHHHHHHhHhhCCCc
Q 021077 54 SPVTICGDIHGQFH-----------DLAELFQ-IGGKCPQECPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQR 118 (317)
Q Consensus 54 ~~i~viGDiHG~~~-----------~l~~ll~-~~~~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~l~~~~p~~ 118 (317)
.++.+++|+|-... ...+.++ .+... ..+.+|++||+++.+... .+.+..+++.....+-.
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p 78 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAE----KPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIP 78 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhc----CCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 47899999996332 1122222 22222 468899999999976653 45555554433333334
Q ss_pred EEEECCCch
Q 021077 119 ITILRGNHE 127 (317)
Q Consensus 119 v~~lrGNHE 127 (317)
++++.||||
T Consensus 79 ~~~~~GNHD 87 (199)
T cd07383 79 WAATFGNHD 87 (199)
T ss_pred EEEECccCC
Confidence 899999999
No 58
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.46 E-value=2.2e-05 Score=72.05 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=48.0
Q ss_pred cCCeeEeeCCC-C-----------CHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEE
Q 021077 53 KSPVTICGDIH-G-----------QFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRIT 120 (317)
Q Consensus 53 ~~~i~viGDiH-G-----------~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~ 120 (317)
..+++.|+|+| . ....|.++++.+.... ...+-+|+.||+++.|. .+-+..+.+...+.+..++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~--~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~ 89 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQ--HEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCV 89 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhC--CCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEE
Confidence 46899999999 1 2455777777653210 03588999999999874 3333333333233344599
Q ss_pred EECCCchhh
Q 021077 121 ILRGNHESR 129 (317)
Q Consensus 121 ~lrGNHE~~ 129 (317)
.++||||..
T Consensus 90 ~v~GNHD~~ 98 (275)
T PRK11148 90 WLPGNHDFQ 98 (275)
T ss_pred EeCCCCCCh
Confidence 999999974
No 59
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.35 E-value=9.6e-06 Score=72.47 Aligned_cols=71 Identities=24% Similarity=0.270 Sum_probs=44.8
Q ss_pred CeeEeeCCCCC------------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEE
Q 021077 55 PVTICGDIHGQ------------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 122 (317)
Q Consensus 55 ~i~viGDiHG~------------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 122 (317)
|+++++|+|=. ...+.++++.+.... ...+-+|++||+++.|.. +..+.+.+...+.+-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~--~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALH--PRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcC--CCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEe
Confidence 58999999944 334566666543310 146889999999998752 22222222222223459999
Q ss_pred CCCchhh
Q 021077 123 RGNHESR 129 (317)
Q Consensus 123 rGNHE~~ 129 (317)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 60
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.35 E-value=6.5e-07 Score=79.15 Aligned_cols=70 Identities=21% Similarity=0.198 Sum_probs=52.5
Q ss_pred CCeeEeeCCCCCHH----HHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcH-HHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 54 SPVTICGDIHGQFH----DLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 54 ~~i~viGDiHG~~~----~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
.++++++|+|.... .+.++++.+... ..+.++++||++|.+.... ....++..+.... .++++.||||.
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~----~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~ 75 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINAL----KPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDY 75 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhcc----CCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCccc
Confidence 57999999998754 667777766544 5688999999999987664 5555555554333 49999999998
Q ss_pred h
Q 021077 129 R 129 (317)
Q Consensus 129 ~ 129 (317)
.
T Consensus 76 ~ 76 (223)
T cd07385 76 Y 76 (223)
T ss_pred c
Confidence 5
No 61
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.31 E-value=8.1e-06 Score=73.14 Aligned_cols=43 Identities=26% Similarity=0.291 Sum_probs=28.5
Q ss_pred CCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 84 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
+.|.+|+.||++++++.. +....+..++.. |..+++++||||.
T Consensus 41 ~~D~viiaGDl~~~~~~~-~~~~~l~~l~~l-~~~v~~V~GNHD~ 83 (232)
T cd07393 41 PEDIVLIPGDISWAMKLE-EAKLDLAWIDAL-PGTKVLLKGNHDY 83 (232)
T ss_pred CCCEEEEcCCCccCCChH-HHHHHHHHHHhC-CCCeEEEeCCccc
Confidence 568999999999877532 333333333322 2348999999997
No 62
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.30 E-value=1.1e-06 Score=77.45 Aligned_cols=29 Identities=3% Similarity=-0.038 Sum_probs=22.4
Q ss_pred ChHHHHHHHHhCCCcEEEecccccccceE
Q 021077 229 GQDISEQFNHTNNLKLIARAHQLVMDGFN 257 (317)
Q Consensus 229 g~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 257 (317)
....+.+.++..+++++|.||++.+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 34556777888999999999999864443
No 63
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.16 E-value=2.3e-05 Score=65.93 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=29.6
Q ss_pred CCCcEEEeeceecCCCCc-HHHH-HHHHHhHhh---C-CCcEEEECCCchhh
Q 021077 84 PDTNYLFMGDYVDRGYYS-VETV-TLLVALKVR---Y-PQRITILRGNHESR 129 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s-~evl-~~l~~l~~~---~-p~~v~~lrGNHE~~ 129 (317)
..+.+|++||++|.+... .+.. ..+..++.. . +-.+++++||||..
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 568999999999987642 2222 222333222 1 23599999999974
No 64
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.00 E-value=1.4e-05 Score=72.59 Aligned_cols=72 Identities=22% Similarity=0.259 Sum_probs=48.7
Q ss_pred CCeeEeeCCCC-C-----------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHH----HHHHHhHhhCCC
Q 021077 54 SPVTICGDIHG-Q-----------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYPQ 117 (317)
Q Consensus 54 ~~i~viGDiHG-~-----------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~p~ 117 (317)
++++.++|+|- . ...|.++++.+... ..+.+++.||++|+...+.+.. .++.+|+...|-
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~----~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAE----QIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHc----CCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 57899999993 2 22345555554443 5688999999999876554432 344455443334
Q ss_pred cEEEECCCchhh
Q 021077 118 RITILRGNHESR 129 (317)
Q Consensus 118 ~v~~lrGNHE~~ 129 (317)
.++++.||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 599999999975
No 65
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.00 E-value=2.6e-05 Score=69.07 Aligned_cols=199 Identities=16% Similarity=0.150 Sum_probs=101.7
Q ss_pred eEeeCCCCC------HHHHHHHHHHcCCCCCCCCCCcEEEeeceec--CCCC-----cHHHHHHHHHhHhhCCCcEEEEC
Q 021077 57 TICGDIHGQ------FHDLAELFQIGGKCPQECPDTNYLFMGDYVD--RGYY-----SVETVTLLVALKVRYPQRITILR 123 (317)
Q Consensus 57 ~viGDiHG~------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vD--rG~~-----s~evl~~l~~l~~~~p~~v~~lr 123 (317)
+.|||+|=. .+.|.+.|+.... ..+.++++||++| .|.+ --+|...|..+. +.+.+++++.
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~-----~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~ 74 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAA-----QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIH 74 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccc-----cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEec
Confidence 368999844 2234555554432 4589999999986 2333 233555555443 3456799999
Q ss_pred CCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEE---eCCEEEEcCCCCCCccchhhhhhcccCccC---
Q 021077 124 GNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEV--- 197 (317)
Q Consensus 124 GNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~--- 197 (317)
||||... ...++ ...|. +.-+|-...+ +.+++++||..--.. ..+-.........
T Consensus 75 GN~Dfll-~~~f~------~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~--~~~y~~~r~~~~~~~~ 135 (237)
T COG2908 75 GNHDFLL-GKRFA------QEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTD--DRAYQWFRYKVHWAWL 135 (237)
T ss_pred CchHHHH-HHHHH------hhcCc----------eEEcCcceeeeecCcEEEEEeCCcccch--HHHHHHHHHHcccHHH
Confidence 9999542 22111 11111 1112222222 358999999642111 0111100000000
Q ss_pred -------CCC--CCccccccCCCCCCCCCCcCCCCCc--c-ccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEE
Q 021077 198 -------PHE--GPMCDLLWSDPDDRCGWGISPRGAG--Y-TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVV 265 (317)
Q Consensus 198 -------~~~--~~~~dllWsdp~~~~~~~~~~rg~~--~-~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~i 265 (317)
|.. ..+..-+|+.. .|........ + ......+.+-+++++++.+|+||++.+....... ..-|
T Consensus 136 ~~lflnl~l~~R~ri~~k~r~~s----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~-~~yi 210 (237)
T COG2908 136 QLLFLNLPLRVRRRIAYKIRSLS----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG-ITYI 210 (237)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhh----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC-ceEE
Confidence 000 00112244432 2322211111 1 2456677888999999999999999876654432 2222
Q ss_pred EEEcCCCCcCCCCCcEEEEEEeCCCce
Q 021077 266 TIFSAPNYCYRCGNMASILEVDDCRSH 292 (317)
Q Consensus 266 ti~Sa~~y~~~~~n~~avl~i~~~~~~ 292 (317)
.+.|- ...+++++++++...
T Consensus 211 ~lGdW-------~~~~s~~~v~~~~~~ 230 (237)
T COG2908 211 NLGDW-------VSEGSILEVDDGGLE 230 (237)
T ss_pred ecCcc-------hhcceEEEEecCcEE
Confidence 22221 245799999877543
No 66
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.96 E-value=6.7e-05 Score=69.18 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=42.4
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
-+++|+||.|.....-...++.+... ....+-++++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 47899999995322222233222110 01467899999999644322 223333333434455 8899999998
Q ss_pred hh
Q 021077 129 RQ 130 (317)
Q Consensus 129 ~~ 130 (317)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 67
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.93 E-value=0.001 Score=60.69 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=51.3
Q ss_pred CCeeEeeCCCCC------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHh--hCCCcEEEECCC
Q 021077 54 SPVTICGDIHGQ------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYPQRITILRGN 125 (317)
Q Consensus 54 ~~i~viGDiHG~------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~--~~p~~v~~lrGN 125 (317)
++++.|+|+|-. ...+.++++.+... +.|.+|+.||+.+.|. .+-.+.+.++-. ..|..++.++||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~----~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQL----KPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcC----CCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 368999999977 33445666777655 5699999999999964 222333333222 556679999999
Q ss_pred chhhhhhh
Q 021077 126 HESRQITQ 133 (317)
Q Consensus 126 HE~~~~~~ 133 (317)
||.+....
T Consensus 75 HD~~~~~~ 82 (301)
T COG1409 75 HDARVVNG 82 (301)
T ss_pred CcCCchHH
Confidence 99876543
No 68
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.90 E-value=2.3e-05 Score=74.20 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=48.2
Q ss_pred CCeeEeeCCC-CC-----------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCC-CCcHHHHHHHHH----hHhhCC
Q 021077 54 SPVTICGDIH-GQ-----------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYP 116 (317)
Q Consensus 54 ~~i~viGDiH-G~-----------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~----l~~~~p 116 (317)
+|++.+||+| |. ...|.++++.+... +.+.++++||++|+. +.+.+++.++.. +....+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~----~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~g 76 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH----GITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAG 76 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc----CCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCC
Confidence 5899999999 41 23445555555444 568999999999985 445555544433 212234
Q ss_pred CcEEEECCCchhh
Q 021077 117 QRITILRGNHESR 129 (317)
Q Consensus 117 ~~v~~lrGNHE~~ 129 (317)
-.++++.||||..
T Consensus 77 i~v~~I~GNHD~~ 89 (340)
T PHA02546 77 ITLHVLVGNHDMY 89 (340)
T ss_pred CeEEEEccCCCcc
Confidence 4699999999974
No 69
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.83 E-value=0.0002 Score=71.35 Aligned_cols=71 Identities=14% Similarity=0.167 Sum_probs=49.3
Q ss_pred ChHHHHHHHHhCCCc----EEEecccccc--cceEE-ecCCeEEEEEcCCCCcCCCCCc---EEEEEEeCCCceEEEEee
Q 021077 229 GQDISEQFNHTNNLK----LIARAHQLVM--DGFNW-AHEQKVVTIFSAPNYCYRCGNM---ASILEVDDCRSHTFIQFE 298 (317)
Q Consensus 229 g~~~~~~fl~~~~~~----~iIrGH~~~~--~G~~~-~~~~~~iti~Sa~~y~~~~~n~---~avl~i~~~~~~~~~~~~ 298 (317)
.++...+.|+.+|++ .||.||+||. +|-.. -++|+++.|+. ++|..+... |++-.|...-...+.+-+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDG--GfskAYqk~TGIAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDG--GFSKAYQKTTGIAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcC--hhhhhhccccCccceEEEecCCcceeccCC
Confidence 355677789999998 9999999986 56543 35899999986 344444443 466666666666666655
Q ss_pred cCC
Q 021077 299 PAP 301 (317)
Q Consensus 299 ~~~ 301 (317)
|-.
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 433
No 70
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.83 E-value=0.00016 Score=65.76 Aligned_cols=70 Identities=21% Similarity=0.082 Sum_probs=41.8
Q ss_pred eeEeeCCCCCHH------HH-HHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-------HHHH-HHHHHhH---hhCCC
Q 021077 56 VTICGDIHGQFH------DL-AELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-------VETV-TLLVALK---VRYPQ 117 (317)
Q Consensus 56 i~viGDiHG~~~------~l-~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-------~evl-~~l~~l~---~~~p~ 117 (317)
++.++|+|-... .. ..+++.+... ..+.+|++||++|+.... .+-. .++..++ ...+.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~----~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVI----KPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKE 77 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhh----CCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcc
Confidence 578999996322 12 2344544444 568999999999976521 1111 2222222 22235
Q ss_pred cEEEECCCchhh
Q 021077 118 RITILRGNHESR 129 (317)
Q Consensus 118 ~v~~lrGNHE~~ 129 (317)
.++.++||||..
T Consensus 78 p~~~v~GNHD~~ 89 (256)
T cd07401 78 KWFDIRGNHDLF 89 (256)
T ss_pred eEEEeCCCCCcC
Confidence 689999999985
No 71
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.77 E-value=4.9e-05 Score=66.81 Aligned_cols=73 Identities=25% Similarity=0.286 Sum_probs=48.0
Q ss_pred CeeEeeCCC-CCH--------------HHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhC---C
Q 021077 55 PVTICGDIH-GQF--------------HDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY---P 116 (317)
Q Consensus 55 ~i~viGDiH-G~~--------------~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~---p 116 (317)
||+.++|+| |.. ..|.++++.+... ..+.+|++||+++....+.+.+..+.....+. +
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEE----KVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhc----CCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 588999999 322 2355666655444 56789999999998765555444333322221 3
Q ss_pred CcEEEECCCchhhhh
Q 021077 117 QRITILRGNHESRQI 131 (317)
Q Consensus 117 ~~v~~lrGNHE~~~~ 131 (317)
-.++++.||||....
T Consensus 77 ~~v~~~~GNHD~~~~ 91 (223)
T cd00840 77 IPVFIIAGNHDSPSR 91 (223)
T ss_pred CCEEEecCCCCCccc
Confidence 359999999998653
No 72
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.69 E-value=0.00012 Score=62.36 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=29.2
Q ss_pred CCCcEEEeeceecCCCCc-HHHHHHH-HHhHhhCCCcEEEECCCchhhh
Q 021077 84 PDTNYLFMGDYVDRGYYS-VETVTLL-VALKVRYPQRITILRGNHESRQ 130 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s-~evl~~l-~~l~~~~p~~v~~lrGNHE~~~ 130 (317)
+.+.+|++||+++..... .+....+ .......+-.+++++||||...
T Consensus 41 ~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 41 GPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred CCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 568999999999865432 2222221 1111223446999999999753
No 73
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.58 E-value=0.00076 Score=59.47 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=42.9
Q ss_pred cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHH-------------------------HHHH
Q 021077 53 KSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVE-------------------------TVTL 107 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e-------------------------vl~~ 107 (317)
..+|.+++|.||+++.+.++.+.+... +.|.+||+||++-....+-| .+.-
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~----~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ 80 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEK----GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDK 80 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHH----T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhcccc----CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHH
Confidence 347999999999999999999887665 67999999999844332222 2222
Q ss_pred HHHhHhhCCCcEEEECCCchhhh
Q 021077 108 LVALKVRYPQRITILRGNHESRQ 130 (317)
Q Consensus 108 l~~l~~~~p~~v~~lrGNHE~~~ 130 (317)
++..-...+--+++++||||...
T Consensus 81 ff~~L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 81 FFRILGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHHHHCC-SEEEEE--TTS-SH
T ss_pred HHHHHHhcCCcEEEecCCCCchH
Confidence 22222233345999999999854
No 74
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.58 E-value=0.00014 Score=64.85 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=43.2
Q ss_pred CCeeEeeCCC-CCHHHHH------------HHHHHcCCCCCCCCCCcEEEeeceecCCCCc---HHHHHHHHHhHhhCCC
Q 021077 54 SPVTICGDIH-GQFHDLA------------ELFQIGGKCPQECPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQ 117 (317)
Q Consensus 54 ~~i~viGDiH-G~~~~l~------------~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~l~~~~p~ 117 (317)
.+..||+|+| |--..+. +.|+.+.......+.+.+|++||+.+..... .++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6789999999 5433321 2333321110111568999999999755432 22233333322 3
Q ss_pred cEEEECCCchhhh
Q 021077 118 RITILRGNHESRQ 130 (317)
Q Consensus 118 ~v~~lrGNHE~~~ 130 (317)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 6999999999753
No 75
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.56 E-value=0.0048 Score=56.19 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=24.8
Q ss_pred cChHHHHHHHHhCCCcEEEecccccccceEEec
Q 021077 228 FGQDISEQFNHTNNLKLIARAHQLVMDGFNWAH 260 (317)
Q Consensus 228 fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~ 260 (317)
-..+..++.|+..+-.+|+.||++ ++.+..+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 467888999999999999999998 4454433
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.54 E-value=0.00081 Score=56.15 Aligned_cols=121 Identities=18% Similarity=0.228 Sum_probs=80.0
Q ss_pred eEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhC
Q 021077 57 TICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 136 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 136 (317)
.|+||+||+++.+..-++.... +.++-+-++++||+..-...+ +-+.-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~--k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~--------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINK--KKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP--------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhc--ccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC---------
Confidence 4899999999999877766532 234678999999998755554 3333333333456666999999998
Q ss_pred ChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeCCEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCCCCCCCC
Q 021077 137 FYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 216 (317)
Q Consensus 137 f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 216 (317)
.-++|++|.=+. .+...++. ..
T Consensus 69 -------------------------------~~DILlTh~wP~-gi~~~~~~-------------------~~------- 90 (150)
T cd07380 69 -------------------------------GVDILLTSEWPK-GISKLSKV-------------------PF------- 90 (150)
T ss_pred -------------------------------CCCEEECCCCch-hhhhhCCC-------------------cc-------
Confidence 347888886221 11000000 00
Q ss_pred CCcCCCCCccccChHHHHHHHHhCCCcEEEeccccc
Q 021077 217 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 252 (317)
Q Consensus 217 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~ 252 (317)
...+..-|...+.++++...-++.+.||..+
T Consensus 91 -----~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 91 -----EETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred -----cccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 0112235778999999999999999999874
No 77
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.52 E-value=0.00025 Score=64.70 Aligned_cols=73 Identities=16% Similarity=0.251 Sum_probs=44.9
Q ss_pred eeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCC-CcHHHH----------HHHHHh--HhhCCCcEEEE
Q 021077 56 VTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGY-YSVETV----------TLLVAL--KVRYPQRITIL 122 (317)
Q Consensus 56 i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~-~s~evl----------~~l~~l--~~~~p~~v~~l 122 (317)
|+|+||+||+++.+...++..... ...+.|.+|++||+-..+. +..+.+ ++..-+ ....|--++++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~-~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKK-EGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHh-cCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEE
Confidence 689999999999987655433221 0015789999999965433 233222 111111 12245558999
Q ss_pred CCCchhh
Q 021077 123 RGNHESR 129 (317)
Q Consensus 123 rGNHE~~ 129 (317)
.||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999974
No 78
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.45 E-value=0.00037 Score=67.43 Aligned_cols=56 Identities=16% Similarity=0.165 Sum_probs=43.6
Q ss_pred cCCeeEeeCCCCC------------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhH
Q 021077 53 KSPVTICGDIHGQ------------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALK 112 (317)
Q Consensus 53 ~~~i~viGDiHG~------------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~ 112 (317)
.+||.+++|+|-. +..|.++++.+... ..|-+++.||+.|+..-|.+++..++++-
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~----~vD~VLiaGDLFd~~~Ps~~~~~~~~~~l 70 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQ----DVDMILLGGDLFHENKPSRKSLYQVLRSL 70 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHc----CCCEEEECCccCCCCCCCHHHHHHHHHHH
Confidence 4689999999943 45667788777655 67899999999999988888876655543
No 79
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.43 E-value=0.00029 Score=59.83 Aligned_cols=68 Identities=25% Similarity=0.383 Sum_probs=43.8
Q ss_pred eeEeeCCCCCHHHH---------------HHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEE
Q 021077 56 VTICGDIHGQFHDL---------------AELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRIT 120 (317)
Q Consensus 56 i~viGDiHG~~~~l---------------~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~ 120 (317)
+++|+|+|=..... .++++.+... ..+.+.+|++||+++++..+.. +.++.++ +..++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~ 73 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNET--VGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKH 73 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhh--cCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeE
Confidence 37899999665542 2233332211 1146899999999999986543 4444333 34599
Q ss_pred EECCCchhhh
Q 021077 121 ILRGNHESRQ 130 (317)
Q Consensus 121 ~lrGNHE~~~ 130 (317)
+++||||...
T Consensus 74 ~v~GNHD~~~ 83 (168)
T cd07390 74 LIKGNHDSSL 83 (168)
T ss_pred EEeCCCCchh
Confidence 9999999754
No 80
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.38 E-value=0.0022 Score=55.78 Aligned_cols=46 Identities=20% Similarity=0.350 Sum_probs=33.9
Q ss_pred CCCcEEEeeceecCCCCc--HHHHHHHHHhHhhCC----CcEEEECCCchhh
Q 021077 84 PDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP----QRITILRGNHESR 129 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p----~~v~~lrGNHE~~ 129 (317)
..+.+|||||++|.|+.+ .+..+.+.+++.-++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 468999999999999864 336666666654322 3588999999974
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.38 E-value=0.00034 Score=64.55 Aligned_cols=72 Identities=19% Similarity=0.161 Sum_probs=51.7
Q ss_pred cCCeeEeeCCCCCHHH--HHHHHHHcCCCCCCCCCCcEEEeeceecC-C-CCcHHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 53 KSPVTICGDIHGQFHD--LAELFQIGGKCPQECPDTNYLFMGDYVDR-G-YYSVETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~--l~~ll~~~~~~~~~~~~~~~vfLGD~vDr-G-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
.-+|+.++|+|-.... ..+.+...... ..|.+++.||++|+ . +....+...+..|+..+| ++++.||||.
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~----~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~ 117 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANE----LPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDY 117 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhc----CCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEeccccc
Confidence 3469999999987766 22333333333 34999999999995 4 445557777888876655 9999999987
Q ss_pred hh
Q 021077 129 RQ 130 (317)
Q Consensus 129 ~~ 130 (317)
..
T Consensus 118 ~~ 119 (284)
T COG1408 118 GV 119 (284)
T ss_pred cc
Confidence 53
No 82
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.38 E-value=0.00033 Score=67.98 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=46.5
Q ss_pred CCeeEeeCCCCC--------HHH----HHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHH----HHHHHhHhhCCC
Q 021077 54 SPVTICGDIHGQ--------FHD----LAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYPQ 117 (317)
Q Consensus 54 ~~i~viGDiHG~--------~~~----l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~p~ 117 (317)
++++.++|+|-. ..+ +..+++.+... ..+.+|+.||++|++..+.+.. .++..++.. +-
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~----~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~ 75 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEH----QVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GC 75 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhc----CCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CC
Confidence 578999999932 111 23344444333 5789999999999986554332 334445432 23
Q ss_pred cEEEECCCchhhh
Q 021077 118 RITILRGNHESRQ 130 (317)
Q Consensus 118 ~v~~lrGNHE~~~ 130 (317)
.++++.||||...
T Consensus 76 ~v~~I~GNHD~~~ 88 (407)
T PRK10966 76 QLVVLAGNHDSVA 88 (407)
T ss_pred cEEEEcCCCCChh
Confidence 5999999999753
No 83
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.23 E-value=0.00043 Score=62.33 Aligned_cols=72 Identities=18% Similarity=0.242 Sum_probs=40.2
Q ss_pred eEeeCCC--CCH---HHHHHHHHHcCCC-CCCCCCCcEEEeeceecCCCC------------cH----HHHHHHHHhHhh
Q 021077 57 TICGDIH--GQF---HDLAELFQIGGKC-PQECPDTNYLFMGDYVDRGYY------------SV----ETVTLLVALKVR 114 (317)
Q Consensus 57 ~viGDiH--G~~---~~l~~ll~~~~~~-~~~~~~~~~vfLGD~vDrG~~------------s~----evl~~l~~l~~~ 114 (317)
++|+|+| +.. ..+..+++.+... +.....+.+|++||++|+... .. ++..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 332 2223344433221 101134899999999997310 11 133333334322
Q ss_pred CCCcEEEECCCchhhh
Q 021077 115 YPQRITILRGNHESRQ 130 (317)
Q Consensus 115 ~p~~v~~lrGNHE~~~ 130 (317)
-.|+++.||||...
T Consensus 82 --~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 --IKIIIIPGNHDAVR 95 (243)
T ss_pred --CeEEEeCCCCCccc
Confidence 35999999999753
No 84
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.96 E-value=0.032 Score=50.77 Aligned_cols=178 Identities=16% Similarity=0.211 Sum_probs=89.6
Q ss_pred CCcEEEeeceecCCCC------------------cHHHHHHHHHhHhhCCC--cEEEECCCchhhhhhhhhC-ChHHHHH
Q 021077 85 DTNYLFMGDYVDRGYY------------------SVETVTLLVALKVRYPQ--RITILRGNHESRQITQVYG-FYDECLR 143 (317)
Q Consensus 85 ~~~~vfLGD~vDrG~~------------------s~evl~~l~~l~~~~p~--~v~~lrGNHE~~~~~~~~~-f~~e~~~ 143 (317)
-.++|+.||.|+.-.. ..+.+..+-.+-.+-|. .|.+++||||......... +......
T Consensus 43 I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp 122 (257)
T cd07387 43 IVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFP 122 (257)
T ss_pred eEEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhh
Confidence 3579999999985432 23334433333322222 4889999999876543222 2222111
Q ss_pred HhCChhhHHHHHHHhhcCCeEEEEeC-CEEEEcCCCCCCccchhhhhhcccCc---c-------CCC-CCCccccccCCC
Q 021077 144 KYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQ---E-------VPH-EGPMCDLLWSDP 211 (317)
Q Consensus 144 ~~~~~~~~~~~~~~f~~lPl~~~v~~-~~l~vHgGi~~~~~~~~~i~~i~r~~---~-------~~~-~~~~~dllWsdp 211 (317)
+ +..+. .=-+-.-|....+++ +++..||- +++++.+..... + ..+ -...-|-||.-|
T Consensus 123 ~---s~~~~--~~~~vtNP~~~~i~g~~vLgtsGq------ni~Di~ky~~~~~~l~~me~~L~wrHlaPTaPDTL~~yP 191 (257)
T cd07387 123 K---SSNYS--TLNLVTNPYEFSIDGVRVLGTSGQ------NVDDILKYSSLESRLDILERTLKWRHIAPTAPDTLWCYP 191 (257)
T ss_pred c---ccccC--CcEEeCCCeEEEECCEEEEEECCC------CHHHHHHhCCCCCHHHHHHHHHHhcccCCCCCCcccccc
Confidence 0 00000 011223466666666 67778873 344443221110 0 000 113345667666
Q ss_pred C-CCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEec--CCeEEEEEcCCCCcCCCCCcEEEEEEe-
Q 021077 212 D-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAH--EQKVVTIFSAPNYCYRCGNMASILEVD- 287 (317)
Q Consensus 212 ~-~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~--~~~~iti~Sa~~y~~~~~n~~avl~i~- 287 (317)
- +...|..... =++++.||++. .|.+... +++-+.+.|.|.+.. .+.++.++
T Consensus 192 ~~~~Dpfvi~~~-------------------PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl 247 (257)
T cd07387 192 FTDRDPFILEEC-------------------PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNL 247 (257)
T ss_pred CCCCCceeecCC-------------------CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEEC
Confidence 2 2222222111 28899999996 4444332 356677777788842 44455555
Q ss_pred CCCceEEEEe
Q 021077 288 DCRSHTFIQF 297 (317)
Q Consensus 288 ~~~~~~~~~~ 297 (317)
++++++.++|
T Consensus 248 ~tLe~~~v~f 257 (257)
T cd07387 248 RTLECEPISF 257 (257)
T ss_pred CcCcEEEEeC
Confidence 4677776654
No 85
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.81 E-value=0.07 Score=52.05 Aligned_cols=210 Identities=16% Similarity=0.211 Sum_probs=106.4
Q ss_pred CeeEeeCCCC-CHHHH----HHHHHHcCCCCCCCCCCcE-EEeeceecC-CC-----------CcHHHHHHHHHhHhhCC
Q 021077 55 PVTICGDIHG-QFHDL----AELFQIGGKCPQECPDTNY-LFMGDYVDR-GY-----------YSVETVTLLVALKVRYP 116 (317)
Q Consensus 55 ~i~viGDiHG-~~~~l----~~ll~~~~~~~~~~~~~~~-vfLGD~vDr-G~-----------~s~evl~~l~~l~~~~p 116 (317)
.+++++|+|= ...-+ ...++-++-+.......+| +..||.||. |- +..+-++.+..+..+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 5899999994 33322 3333333222001133354 456799994 21 22444566666666666
Q ss_pred C--cEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHHHhhcCCeEEEEeC-CEEEEcCCCCCCccchhhhhhc-c
Q 021077 117 Q--RITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNF-D 192 (317)
Q Consensus 117 ~--~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~~v~~-~~l~vHgGi~~~~~~~~~i~~i-~ 192 (317)
. .|++.+||||..-.........+..+.. +...+-.|-.-|....+++ +++..||= +++++... +
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~ksl-----f~~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~vP 375 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSL-----FSLNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLVP 375 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhccc-----ccccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhCC
Confidence 5 4789999999865443332222211111 1111112223344444444 68888972 44444322 2
Q ss_pred cCcc-CCC------------CCCccccccCCCCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEe
Q 021077 193 RVQE-VPH------------EGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWA 259 (317)
Q Consensus 193 r~~~-~~~------------~~~~~dllWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~ 259 (317)
+... .+. .+..-+-+|.-|.....+... + --+++++||++. .|+...
T Consensus 376 ~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~lVIe--------------e-----vPDv~~~Ghvh~-~g~~~y 435 (481)
T COG1311 376 GADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYLVIE--------------E-----VPDVFHTGHVHK-FGTGVY 435 (481)
T ss_pred CCCccchHHHHHHHHHhcccCCCCCCccccccCCcCceeec--------------c-----CCcEEEEccccc-cceeEE
Confidence 2100 000 012344555555432111111 0 128899999997 788777
Q ss_pred cCCeEEEEEcCCCCcCCCCCcEEEEEEeC-CCceEEEEeec
Q 021077 260 HEQKVVTIFSAPNYCYRCGNMASILEVDD-CRSHTFIQFEP 299 (317)
Q Consensus 260 ~~~~~iti~Sa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~ 299 (317)
.+.++|...|.+... -.+-++.|+. -..+.+..+..
T Consensus 436 ~gv~~vns~T~q~qT----efqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 436 EGVNLVNSGTWQEQT----EFQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred eccceEEeeeecchh----ccceEEEecCcccceeEEeccc
Confidence 777888888876653 2344555554 33455555544
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.72 E-value=0.0024 Score=57.58 Aligned_cols=67 Identities=30% Similarity=0.334 Sum_probs=43.7
Q ss_pred CeeEeeCCCCCH---------HHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcH-----HHHHHHHHhHhhCCCcEE
Q 021077 55 PVTICGDIHGQF---------HDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSV-----ETVTLLVALKVRYPQRIT 120 (317)
Q Consensus 55 ~i~viGDiHG~~---------~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~-----evl~~l~~l~~~~p~~v~ 120 (317)
+|+.++|+||.+ ..+.++++..... .+...++..||+++..+.+. .++..+.++. -.+
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~---~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d~- 73 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAE---NENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YDA- 73 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhc---CCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CCE-
Confidence 578999999887 4556677665443 13446677999999877643 3444444432 223
Q ss_pred EECCCchhh
Q 021077 121 ILRGNHESR 129 (317)
Q Consensus 121 ~lrGNHE~~ 129 (317)
+..||||..
T Consensus 74 ~~~GNHe~d 82 (252)
T cd00845 74 VTIGNHEFD 82 (252)
T ss_pred Eeecccccc
Confidence 456999963
No 87
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.68 E-value=0.0035 Score=53.50 Aligned_cols=47 Identities=23% Similarity=0.259 Sum_probs=30.8
Q ss_pred CCCcEEEeeceecCCCCcH--H---HHHHHHHhHhhC-----CCcEEEECCCchhhh
Q 021077 84 PDTNYLFMGDYVDRGYYSV--E---TVTLLVALKVRY-----PQRITILRGNHESRQ 130 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~--e---vl~~l~~l~~~~-----p~~v~~lrGNHE~~~ 130 (317)
..+.+|++||++|.+.... + .+..+.++.... +-.++.++||||...
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 5689999999999886432 2 333333332111 345999999999853
No 88
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.54 E-value=0.0033 Score=56.01 Aligned_cols=75 Identities=19% Similarity=0.243 Sum_probs=46.9
Q ss_pred ccCCeeEeeCCCCCHHHHH----------------HHHH-HcCCCCCCCCCCcEEEeeceecCCCC-----cHHHHHHHH
Q 021077 52 VKSPVTICGDIHGQFHDLA----------------ELFQ-IGGKCPQECPDTNYLFMGDYVDRGYY-----SVETVTLLV 109 (317)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~----------------~ll~-~~~~~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~ 109 (317)
...+..|++|+|=-+.... +.+. ..... +.+++|++||+-.-.+. ..++-.++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~----~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~ 93 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERY----GPKRLIILGDLKHEFGKSLRQEKEEVREFLE 93 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhc----CCCEEEEcCccccccCccccccHHHHHHHHH
Confidence 4568999999997665432 2222 11122 56899999999654332 244444444
Q ss_pred HhHhhCCCcEEEECCCchhhhhhh
Q 021077 110 ALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 110 ~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
.+..+ .++.++||||...-..
T Consensus 94 ~~~~~---evi~i~GNHD~~i~~~ 114 (235)
T COG1407 94 LLDER---EVIIIRGNHDNGIEEI 114 (235)
T ss_pred HhccC---cEEEEeccCCCccccc
Confidence 44433 4999999999864433
No 89
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.53 E-value=0.0071 Score=58.32 Aligned_cols=73 Identities=22% Similarity=0.248 Sum_probs=51.3
Q ss_pred CCeeEeeCCCCC-------------HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhh-C--CC
Q 021077 54 SPVTICGDIHGQ-------------FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVR-Y--PQ 117 (317)
Q Consensus 54 ~~i~viGDiHG~-------------~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~-~--p~ 117 (317)
+|+..++|.|=- +.+|..+++.+... ..|-+|+-||+.|+..-|.+++.++.+...+ . .-
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~----~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE----KVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc----cCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCC
Confidence 578899999955 23344555655554 5688999999999988787776665553322 1 12
Q ss_pred cEEEECCCchhhh
Q 021077 118 RITILRGNHESRQ 130 (317)
Q Consensus 118 ~v~~lrGNHE~~~ 130 (317)
.|++|.||||...
T Consensus 77 pv~~I~GNHD~~~ 89 (390)
T COG0420 77 PVVVIAGNHDSPS 89 (390)
T ss_pred cEEEecCCCCchh
Confidence 4999999999864
No 90
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.47 E-value=0.028 Score=46.36 Aligned_cols=130 Identities=23% Similarity=0.319 Sum_probs=84.7
Q ss_pred eeEeeCCCC--CHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 56 VTICGDIHG--QFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 56 i~viGDiHG--~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
+.|+||+|= ...+|-.-|++.-.+. ...+++.+|++. |.|.+++|..+. +.++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPg---ki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~---- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPG---KIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN---- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCC---ceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc----
Confidence 578999984 4455655666655552 457899999975 568888888775 5699999987753
Q ss_pred hhCChHHHHHHhCChhhHHHHHHHhhcCCeEE--EEeC-CEEEEcCCCCCCccchhhhhhcccCccCCCCCCccccccCC
Q 021077 134 VYGFYDECLRKYGNANIWKIFTDLFDYFPLTA--LVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 210 (317)
Q Consensus 134 ~~~f~~e~~~~~~~~~~~~~~~~~f~~lPl~~--~v~~-~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsd 210 (317)
.+| |..- .++. |+-++||-. =+=|.|
T Consensus 67 ---------~~y----------------P~~kvvtvGqfkIG~chGhq--------------------------ViP~gd 95 (183)
T KOG3325|consen 67 ---------LKY----------------PENKVVTVGQFKIGLCHGHQ--------------------------VIPWGD 95 (183)
T ss_pred ---------ccC----------------CccceEEeccEEEEeecCcE--------------------------eecCCC
Confidence 112 2222 2222 799999831 022555
Q ss_pred CCCCCCCCcCCCCCccccChHHHHHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCC
Q 021077 211 PDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPN 272 (317)
Q Consensus 211 p~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~ 272 (317)
| +++.-.-+..++++++.|||+..+-|+.. ++-.|+-.||++
T Consensus 96 ~-------------------~sL~~LaRqldvDILl~G~Th~f~Aye~e-g~ffvnPGSaTG 137 (183)
T KOG3325|consen 96 P-------------------ESLALLARQLDVDILLTGHTHKFEAYEHE-GKFFVNPGSATG 137 (183)
T ss_pred H-------------------HHHHHHHHhcCCcEEEeCCceeEEEEEeC-CcEEeCCCcccC
Confidence 5 34555566789999999999987777642 233445555543
No 91
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.45 E-value=0.0081 Score=49.92 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhh
Q 021077 84 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 130 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 130 (317)
++|.+++|||+.-.-....+...++.+| |+++++++||||-.-
T Consensus 45 p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 45 PDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred ccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 7899999999976444434444444443 578999999999753
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.25 E-value=0.01 Score=51.58 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=43.3
Q ss_pred eCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHH-HHHHHHHhHhhC---------------------CC
Q 021077 60 GDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------PQ 117 (317)
Q Consensus 60 GDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~---------------------p~ 117 (317)
=|++|+-.=|.+.++.+-.. ...+.++||||++|.|--+-+ =.....+.+..+ .-
T Consensus 23 ld~~~~D~YL~~~~~~~~~~---l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i 99 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFW---LKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKT 99 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHh---cCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCc
Confidence 35667767777777765432 156899999999998753322 233344444332 13
Q ss_pred cEEEECCCchhh
Q 021077 118 RITILRGNHESR 129 (317)
Q Consensus 118 ~v~~lrGNHE~~ 129 (317)
.++.|.||||.-
T Consensus 100 ~~i~V~GNHDIG 111 (193)
T cd08164 100 PLINIAGNHDVG 111 (193)
T ss_pred eEEEECCcccCC
Confidence 468999999983
No 93
>PLN02533 probable purple acid phosphatase
Probab=96.12 E-value=0.0072 Score=59.07 Aligned_cols=71 Identities=18% Similarity=0.276 Sum_probs=43.2
Q ss_pred cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-H--HHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 53 KSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-V--ETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-~--evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
.-+++++||+|-. ......++.+... ..+-++++||+++.+... . +-..++..+....| ++.++||||..
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~----~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~ 211 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKW----DYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELE 211 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhc----CCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCcccccc
Confidence 4479999999532 2223344444333 467899999999754331 1 12333333444455 88999999985
Q ss_pred h
Q 021077 130 Q 130 (317)
Q Consensus 130 ~ 130 (317)
.
T Consensus 212 ~ 212 (427)
T PLN02533 212 K 212 (427)
T ss_pred c
Confidence 3
No 94
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.01 E-value=0.01 Score=45.51 Aligned_cols=51 Identities=18% Similarity=0.123 Sum_probs=37.3
Q ss_pred CCCCC-CCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 021077 2 GANSL-STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV 52 (317)
Q Consensus 2 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~ 52 (317)
|.++- ...+...+.++++++..+..++...+..|+.++.++|+.+|+++++
T Consensus 44 GP~l~~~~it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 44 GPRLEDEPITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp SS--BTTB--HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 44444 4567778999999999999999999999999999999999999764
No 95
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.90 E-value=0.01 Score=54.40 Aligned_cols=66 Identities=21% Similarity=0.238 Sum_probs=39.5
Q ss_pred CeeEeeCCCCCHH----------------HHHHHHHHcCCCCCCCCCCcEEE-eeceecCCCCc-----------HHHHH
Q 021077 55 PVTICGDIHGQFH----------------DLAELFQIGGKCPQECPDTNYLF-MGDYVDRGYYS-----------VETVT 106 (317)
Q Consensus 55 ~i~viGDiHG~~~----------------~l~~ll~~~~~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~ 106 (317)
+|+.++|+||++. .+..+++..... ..+.+++ .||+++..+.+ ..+++
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~----~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~ 77 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE----NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIA 77 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc----CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHH
Confidence 5788999999973 345566655433 2344444 79999865522 22444
Q ss_pred HHHHhHhhCCCcEEEECCCchhh
Q 021077 107 LLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 107 ~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
.+..+. + -++..||||..
T Consensus 78 ~ln~~g---~--d~~~lGNHe~d 95 (277)
T cd07410 78 AMNALG---Y--DAGTLGNHEFN 95 (277)
T ss_pred HHHhcC---C--CEEeecccCcc
Confidence 444443 2 24556999963
No 96
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=95.69 E-value=0.16 Score=46.81 Aligned_cols=74 Identities=22% Similarity=0.194 Sum_probs=42.4
Q ss_pred eeEeeCCCCCH--HHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcH--H------HHHHHHHhHhhCCC-cEEEECC
Q 021077 56 VTICGDIHGQF--HDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYPQ-RITILRG 124 (317)
Q Consensus 56 i~viGDiHG~~--~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~l~~~~p~-~v~~lrG 124 (317)
.--.|+-..+. ..+..+++.+.... .+.+-+|++||+++.+.... + .-.+...++..+|+ .|+.+.|
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~--~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~G 117 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNH--PKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALG 117 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhC--CCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCC
Confidence 44466665333 33455555443220 15688999999998876421 1 12223334433332 5999999
Q ss_pred Cchhhhh
Q 021077 125 NHESRQI 131 (317)
Q Consensus 125 NHE~~~~ 131 (317)
|||....
T Consensus 118 NHD~~p~ 124 (296)
T cd00842 118 NHDSYPV 124 (296)
T ss_pred CCCCCcc
Confidence 9998643
No 97
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.64 E-value=0.16 Score=43.35 Aligned_cols=42 Identities=26% Similarity=0.359 Sum_probs=29.7
Q ss_pred CCCcEEEeecee--cCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 84 PDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 84 ~~~~~vfLGD~v--DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
+.|.++.-||+- -|=+...+-+.++-. -|+.-+++|||||..
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYW 86 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYW 86 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccc
Confidence 577788889983 344444555555554 478889999999985
No 98
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.62 E-value=0.0055 Score=59.37 Aligned_cols=115 Identities=14% Similarity=0.032 Sum_probs=96.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccc----CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc
Q 021077 26 PLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS 101 (317)
Q Consensus 26 ~~~~~~~~~l~~~a~~~~~~e~~~~~~~----~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s 101 (317)
.+...++..+++.+.+++..+|+..... .-.+.++|.||.+.|+...++.. +. ..--|++=|++++++...
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~---~~K~Y~rrg~a~m~l~~~ 88 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PT---YIKAYVRRGTAVMALGEF 88 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--ch---hhheeeeccHHHHhHHHH
Confidence 4778899999999999999999876442 34789999999999998887765 21 345699999999999999
Q ss_pred HHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHh
Q 021077 102 VETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKY 145 (317)
Q Consensus 102 ~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~ 145 (317)
.+.+..+...+...|+...+.|++||+..+-..++|..+....+
T Consensus 89 ~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 89 KKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 99999999999999999999999999988887777776554444
No 99
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.03 E-value=0.048 Score=49.68 Aligned_cols=25 Identities=8% Similarity=0.013 Sum_probs=20.8
Q ss_pred hHHHHHHHHhCCCcEEEeccccccc
Q 021077 230 QDISEQFNHTNNLKLIARAHQLVMD 254 (317)
Q Consensus 230 ~~~~~~fl~~~~~~~iIrGH~~~~~ 254 (317)
.+.+.++++++++++++.||++...
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccce
Confidence 3567788999999999999999743
No 100
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.01 E-value=0.031 Score=50.68 Aligned_cols=66 Identities=23% Similarity=0.244 Sum_probs=40.8
Q ss_pred CeeEeeCCCCCHH----------HHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHHHHHhHhhCCCcE
Q 021077 55 PVTICGDIHGQFH----------DLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRI 119 (317)
Q Consensus 55 ~i~viGDiHG~~~----------~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v 119 (317)
+|+.++|+||++. .+..+++..... +++.++..||+++..+.+ ..+++.+..+. -.+
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~----~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~ 73 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL----DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA 73 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc----CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE
Confidence 5788999999853 345556555432 456777899999876533 23333333332 124
Q ss_pred EEECCCchhh
Q 021077 120 TILRGNHESR 129 (317)
Q Consensus 120 ~~lrGNHE~~ 129 (317)
+..||||..
T Consensus 74 -~~~GNHefd 82 (257)
T cd07408 74 -VTPGNHEFD 82 (257)
T ss_pred -Ecccccccc
Confidence 456999963
No 101
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.81 E-value=0.029 Score=51.84 Aligned_cols=67 Identities=25% Similarity=0.376 Sum_probs=42.7
Q ss_pred CeeEeeCCCCCHHH--------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCC-c-----HHHHHHHHHhHhh
Q 021077 55 PVTICGDIHGQFHD--------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYY-S-----VETVTLLVALKVR 114 (317)
Q Consensus 55 ~i~viGDiHG~~~~--------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~-s-----~evl~~l~~l~~~ 114 (317)
+|+.+.|+||++.. +..+++..... .+...++..||++...+. + ..++..+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ---NPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc---CCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe
Confidence 57889999998653 55566655432 145677779999976653 2 2355555555432
Q ss_pred CCCcEEEECCCchhh
Q 021077 115 YPQRITILRGNHESR 129 (317)
Q Consensus 115 ~p~~v~~lrGNHE~~ 129 (317)
+ +..||||.-
T Consensus 79 ----a-~t~GNHefd 88 (288)
T cd07412 79 ----A-SAVGNHEFD 88 (288)
T ss_pred ----e-eeecccccc
Confidence 3 566999963
No 102
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=93.95 E-value=0.12 Score=49.76 Aligned_cols=73 Identities=19% Similarity=0.368 Sum_probs=47.6
Q ss_pred cCCeeEeeCCC--CC---------HHH------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCC--cHHHHHHHHHhHh
Q 021077 53 KSPVTICGDIH--GQ---------FHD------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYY--SVETVTLLVALKV 113 (317)
Q Consensus 53 ~~~i~viGDiH--G~---------~~~------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~--s~evl~~l~~l~~ 113 (317)
.-++..|+|-| |+ ++. |.+.+...... ...+.++||||++|-|.. .-|=-+...+++.
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~---lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfkk 124 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWR---LKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKK 124 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhc---cCCCEEEEeccccccCccCChHHHHHHHHHHHH
Confidence 34788999954 42 222 23444444332 256889999999998875 3444555666665
Q ss_pred hCCC----cEEEECCCchh
Q 021077 114 RYPQ----RITILRGNHES 128 (317)
Q Consensus 114 ~~p~----~v~~lrGNHE~ 128 (317)
-+|. ++..+.||||.
T Consensus 125 If~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 125 IFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred hhCCCCCCeeEEeCCcccc
Confidence 5554 68899999996
No 103
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.94 E-value=0.14 Score=46.70 Aligned_cols=67 Identities=25% Similarity=0.190 Sum_probs=36.6
Q ss_pred CeeEeeCCCCCHHH----------------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHH
Q 021077 55 PVTICGDIHGQFHD----------------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTL 107 (317)
Q Consensus 55 ~i~viGDiHG~~~~----------------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~ 107 (317)
.|+.++|+||++.. +..+++...... .++..++..||+++..+.+ ..++..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~--~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 79 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAER--NPNTLLLDGGDTWQGSGEALYTRGQAMVDA 79 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhc--CCCeEEEeCCCccCCChHHhhcCChhHHHH
Confidence 36778899997533 334444432210 1334446699999876543 233444
Q ss_pred HHHhHhhCCCcEEEECCCchhh
Q 021077 108 LVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 108 l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
+.++ +- -.+. ||||..
T Consensus 80 l~~~----g~-da~~-GNHefd 95 (264)
T cd07411 80 LNAL----GV-DAMV-GHWEFT 95 (264)
T ss_pred HHhh----CC-eEEe-cccccc
Confidence 4443 22 2334 999964
No 104
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=92.46 E-value=0.23 Score=45.71 Aligned_cols=67 Identities=21% Similarity=0.252 Sum_probs=38.6
Q ss_pred CeeEeeCCCCCH---------------------HHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHHH
Q 021077 55 PVTICGDIHGQF---------------------HDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTLL 108 (317)
Q Consensus 55 ~i~viGDiHG~~---------------------~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l 108 (317)
+|+.++|+||++ ..+..+++..... .++..++..||+++..+.+ ..+++.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~---~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l 78 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE---NPNVLFLNAGDAFQGTLWYTLYKGNADAEFM 78 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc---CCCEEEEeCCCCCCCcchhhhcCChHHHHHH
Confidence 467889999875 3344555554332 1344555589999876532 2334444
Q ss_pred HHhHhhCCCcEEEECCCchhh
Q 021077 109 VALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 109 ~~l~~~~p~~v~~lrGNHE~~ 129 (317)
.++.. .+ +..||||.-
T Consensus 79 n~~g~----D~-~~lGNHefd 94 (281)
T cd07409 79 NLLGY----DA-MTLGNHEFD 94 (281)
T ss_pred HhcCC----CE-EEecccccc
Confidence 33322 24 445999963
No 105
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=92.36 E-value=3 Score=40.72 Aligned_cols=255 Identities=17% Similarity=0.204 Sum_probs=126.0
Q ss_pred CCCCCCCCCCcccHHHHHHHHhcCCCCCHH---HHHHHHHHHHHHHhhCCCcccccCCeeEeeCCC------CCHHHHHH
Q 021077 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEP---QVKALCEKAKEILMEESNVQPVKSPVTICGDIH------GQFHDLAE 71 (317)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiH------G~~~~l~~ 71 (317)
|||-|+|..-...+.++-.+..+...+... -+..|+.-|.+.....|..... ++.. .|.. .....+.+
T Consensus 232 mgA~sGs~vc~aNvIRIcaRY~NldilEd~YGInLrpl~~~A~kyY~ddp~~~f~-~k~~--~~~~~s~~E~~~i~kmhk 308 (648)
T COG3855 232 MGAASGSKVCMANVIRICARYDNLDILEDSYGINLRPLATFAEKYYGDDPCKRFQ-PKEE--EDERLSDDEIALIAKMHK 308 (648)
T ss_pred eecccCChHHHHHHHHHHHhhccchhhhhhcCcchHHHHHHHHHHhCCCchhccC-CCcC--cccccchhHHHHHHHHHH
Confidence 799999999998888888887776655554 3566777787887766654321 1110 0110 01111112
Q ss_pred HHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh------hhhhh--hCC---hHH
Q 021077 72 LFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR------QITQV--YGF---YDE 140 (317)
Q Consensus 72 ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~------~~~~~--~~f---~~e 140 (317)
..+.+.+. .=|-++-|-|. .++=..+..-++.|-.+-+-|-|+-=.. -++.. +.. ..|
T Consensus 309 AiaiiQFK----------lE~~~ikRrpe-f~me~R~~L~~Idy~~~tI~l~g~~Y~L~dt~fpTinp~~P~~L~~EE~e 377 (648)
T COG3855 309 AIAIIQFK----------LEGEIIKRRPE-FEMEHRLLLEKIDYEKGTITLNGKTYPLNDTCFPTINPEQPYELLEEEEE 377 (648)
T ss_pred HHHHhhhh----------hccHhhhcCCc-ccchHHHHHHhcccccCeEEECCeEeecccccCCcCCCCChHHhhHHHHH
Confidence 22333332 23567777663 2222222223345555666666642110 01111 111 112
Q ss_pred ----HHHHhCChhhHHHHHHH-hhcCCeEEEEeCCEEEEcCCCCCCc-----------------cchhhhhhcc-----c
Q 021077 141 ----CLRKYGNANIWKIFTDL-FDYFPLTALVESEIFCLHGGLSPSI-----------------ETLDNIRNFD-----R 193 (317)
Q Consensus 141 ----~~~~~~~~~~~~~~~~~-f~~lPl~~~v~~~~l~vHgGi~~~~-----------------~~~~~i~~i~-----r 193 (317)
....|..++-.++..+| |+.=.+...- +.-+..||.||-+- ..++.++.+- +
T Consensus 378 vi~kl~~sf~~sekL~rHv~fl~~kG~myL~y-NgNLL~HgCiPl~enG~f~~~~i~~~~y~Gr~Lld~fd~~vRka~~~ 456 (648)
T COG3855 378 VIDKLLASFQNSEKLQRHVQFLFSKGSMYLKY-NGNLLIHGCIPLDENGEFKEFTIEDEAYKGRELLDKFDQLVRKAFAH 456 (648)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHhcCcEEEEe-cCceEEEeeeecCCCCceeEEEEcCCccccHHHHHHHHHHHHHHhcC
Confidence 33344444444455554 4444444444 44478899886321 1234443332 2
Q ss_pred CccCCCCCCcccccc---CCCCCC-------CCCC---cC-------CCCCcccc--ChHHHHHHHHhCCCc----EEEe
Q 021077 194 VQEVPHEGPMCDLLW---SDPDDR-------CGWG---IS-------PRGAGYTF--GQDISEQFNHTNNLK----LIAR 247 (317)
Q Consensus 194 ~~~~~~~~~~~dllW---sdp~~~-------~~~~---~~-------~rg~~~~f--g~~~~~~fl~~~~~~----~iIr 247 (317)
+.....+...+|++| +-+... ..|+ .. ....-|.. .++...+.|+.+|++ .||.
T Consensus 457 ~entk~~~~a~D~iWYLWtG~~SsLFGK~~MtTFERYfI~dK~THkE~KnPYy~lrede~ic~kil~eFGLdpe~ghiIN 536 (648)
T COG3855 457 PENTKVDKLATDLIWYLWTGEYSSLFGKRAMTTFERYFIDDKKTHKEKKNPYYKLREDEEICRKILEEFGLDPEGGHIIN 536 (648)
T ss_pred cccCccchhhhceeeeeecccccchhcchhhhHHHHHHhccchhhhhhcCchhhhcchHHHHHHHHHHhCCCcccCceec
Confidence 222222344566654 433210 0010 00 00111111 234567788888877 8999
Q ss_pred ccccccc--ceE-EecCCeEEEEEcC
Q 021077 248 AHQLVMD--GFN-WAHEQKVVTIFSA 270 (317)
Q Consensus 248 GH~~~~~--G~~-~~~~~~~iti~Sa 270 (317)
||||+.+ |-. .-++|++|-|+.+
T Consensus 537 GHtPVke~~GE~PIKAngKliVIDGG 562 (648)
T COG3855 537 GHTPVKEKNGENPIKANGKLIVIDGG 562 (648)
T ss_pred CCCcccccCCCCCccCCCeEEEEcCc
Confidence 9999864 322 2358999999863
No 106
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=92.11 E-value=0.26 Score=45.03 Aligned_cols=68 Identities=15% Similarity=0.105 Sum_probs=49.6
Q ss_pred CCeeEeeCCCCC--HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCC-CCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 54 SPVTICGDIHGQ--FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 54 ~~i~viGDiHG~--~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
++|.++|||=|. ...+...|..+.... +.|-+|.-||....| .-+.++.+.|.++.. .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~---~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKY---QADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhC---CCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 579999999999 556677777665431 356677789988766 447788888887654 36666 999975
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.42 E-value=0.23 Score=54.65 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=40.9
Q ss_pred CCeeEeeCCCCCHHH---HHHHHHHcCCCCCCCCCCcEEE-eeceecCCCCc-----HHHHHHHHHhHhhCCCcEEEECC
Q 021077 54 SPVTICGDIHGQFHD---LAELFQIGGKCPQECPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRG 124 (317)
Q Consensus 54 ~~i~viGDiHG~~~~---l~~ll~~~~~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrG 124 (317)
-+|+.++|+||.+.. +..+++..... ..+.+++ .||+++..+.+ ..+++++.++. --++..|
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~----~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~G 731 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEE----NPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFG 731 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhh----CCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEec
Confidence 368999999998643 44455554332 2344444 89999877643 23455444442 1346899
Q ss_pred Cchh
Q 021077 125 NHES 128 (317)
Q Consensus 125 NHE~ 128 (317)
|||.
T Consensus 732 NHEf 735 (1163)
T PRK09419 732 NHEF 735 (1163)
T ss_pred cccc
Confidence 9996
No 108
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=91.37 E-value=0.54 Score=45.85 Aligned_cols=33 Identities=9% Similarity=0.010 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCCcEEEecccccccceEEecCCe
Q 021077 231 DISEQFNHTNNLKLIARAHQLVMDGFNWAHEQK 263 (317)
Q Consensus 231 ~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~ 263 (317)
..++.++-++++++++-||.+.-+.....++.+
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~ 354 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNT 354 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhcce
Confidence 368999999999999999999866655555543
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=91.18 E-value=0.39 Score=43.58 Aligned_cols=65 Identities=32% Similarity=0.301 Sum_probs=40.9
Q ss_pred eeEeeCCC----------CCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHHHHHhHhhCCCcEE
Q 021077 56 VTICGDIH----------GQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRIT 120 (317)
Q Consensus 56 i~viGDiH----------G~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~ 120 (317)
|.-+.|+| |.+..+..+++..... .++..++..||+++..+.+ ..++..+..+.. -+
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~---~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~ 74 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE---NPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DL 74 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhc---CCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cE
Confidence 45566777 3466677777765543 1445777799999876532 345555555431 34
Q ss_pred EECCCchh
Q 021077 121 ILRGNHES 128 (317)
Q Consensus 121 ~lrGNHE~ 128 (317)
...||||.
T Consensus 75 ~~~GNHef 82 (257)
T cd07406 75 ACFGNHEF 82 (257)
T ss_pred Eeeccccc
Confidence 57899996
No 110
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=89.71 E-value=0.95 Score=42.53 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=26.8
Q ss_pred CCCcEEEeeceecCCCCcHHHHHHHHH---hHhhCCCcEEEECCCchhh
Q 021077 84 PDTNYLFMGDYVDRGYYSVETVTLLVA---LKVRYPQRITILRGNHESR 129 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~evl~~l~~---l~~~~p~~v~~lrGNHE~~ 129 (317)
..|.+||+||.|+. .........+++ =.+.+.=--.++.||||..
T Consensus 100 ~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 100 KPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred CCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccc
Confidence 56899999999986 433333333322 1122211245799999985
No 111
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=89.40 E-value=0.46 Score=44.79 Aligned_cols=74 Identities=20% Similarity=0.332 Sum_probs=47.9
Q ss_pred CCeeEeeCCCCCHHHHH---HHHHHcCCCCCCCCCCcEEEeeceec-CCCC---cHHH---HHHHHH------hHhhCCC
Q 021077 54 SPVTICGDIHGQFHDLA---ELFQIGGKCPQECPDTNYLFMGDYVD-RGYY---SVET---VTLLVA------LKVRYPQ 117 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~---~ll~~~~~~~~~~~~~~~vfLGD~vD-rG~~---s~ev---l~~l~~------l~~~~p~ 117 (317)
+||.|=|=.||.++.+- ...++.|.. +.|.++++||+=. |... ++.| ...+.. =...+|=
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~t----kVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APV 76 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNT----KVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPV 76 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCC----CccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCce
Confidence 58899999999999986 444555555 6899999999832 3222 2222 111111 1123555
Q ss_pred cEEEECCCchhhhh
Q 021077 118 RITILRGNHESRQI 131 (317)
Q Consensus 118 ~v~~lrGNHE~~~~ 131 (317)
-.+++=||||.++.
T Consensus 77 lTIFIGGNHEAsny 90 (456)
T KOG2863|consen 77 LTIFIGGNHEASNY 90 (456)
T ss_pred eEEEecCchHHHHH
Confidence 56789999999764
No 112
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=89.20 E-value=0.56 Score=40.88 Aligned_cols=72 Identities=10% Similarity=0.179 Sum_probs=40.0
Q ss_pred eeEeeCCCCC-----HHHHHHHHHHcC-CCCCCCCCCcEEEeeceecCCCCcH-------------HHHHHHHHhHhhC-
Q 021077 56 VTICGDIHGQ-----FHDLAELFQIGG-KCPQECPDTNYLFMGDYVDRGYYSV-------------ETVTLLVALKVRY- 115 (317)
Q Consensus 56 i~viGDiHG~-----~~~l~~ll~~~~-~~~~~~~~~~~vfLGD~vDrG~~s~-------------evl~~l~~l~~~~- 115 (317)
|++++|+|=. ++.|.++|+... .. ..+.+|++|+++|.-.... .-+..+.+...+.
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~----~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 76 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDAS----KPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESIL 76 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCT----TECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCH
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccC----CCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcc
Confidence 5678887755 556677777766 44 5789999999999632211 1122222221111
Q ss_pred -CCcEEEECCCchhhhh
Q 021077 116 -PQRITILRGNHESRQI 131 (317)
Q Consensus 116 -p~~v~~lrGNHE~~~~ 131 (317)
--+|++++|+||....
T Consensus 77 ~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 77 PSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp CCSEEEEE--TTCTT-S
T ss_pred cccEEEEeCCCcccccc
Confidence 1479999999998654
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=86.90 E-value=0.7 Score=42.61 Aligned_cols=70 Identities=17% Similarity=0.059 Sum_probs=37.7
Q ss_pred CeeEeeCCCCCHHH----------HHHHHHHcCCC-CCCCCCCcEEEeeceecCCCC-----cHHHHHHHHHhHhhCCCc
Q 021077 55 PVTICGDIHGQFHD----------LAELFQIGGKC-PQECPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQR 118 (317)
Q Consensus 55 ~i~viGDiHG~~~~----------l~~ll~~~~~~-~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~~~p~~ 118 (317)
.|+.+.|+||++.. +..+++..... ....++..++-.||.+...+. ...+++++.++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 47788999998633 33444433211 000134556668999843332 23344555554432
Q ss_pred EEEECCCchhh
Q 021077 119 ITILRGNHESR 129 (317)
Q Consensus 119 v~~lrGNHE~~ 129 (317)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 4 355999963
No 114
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.15 E-value=1.8 Score=42.20 Aligned_cols=71 Identities=21% Similarity=0.361 Sum_probs=52.0
Q ss_pred cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCc
Q 021077 53 KSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 126 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNH 126 (317)
+.+|.||||.-|+++.|.+-.+..... +++-+.++++||+.+.-.++-|++.+....+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk--~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKK--SGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhc--CCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 468999999999999987766655443 3456889999999987666777777665543 3455577666654
No 115
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=85.72 E-value=1.6 Score=39.62 Aligned_cols=67 Identities=19% Similarity=0.177 Sum_probs=45.7
Q ss_pred CeeEeeCCCCCHHH--HHHHHHHcCCCCCCCCCCcEEEeeceecCC-CCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 55 PVTICGDIHGQFHD--LAELFQIGGKCPQECPDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 55 ~i~viGDiHG~~~~--l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
||.+||||=|.... +...|...... .+.+-+|.-||..-.| .-+.++.+.|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~---~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKE---YKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHH---CCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 58899999998765 35556555332 1346666679988666 3577788888776543 5555 999864
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=85.60 E-value=0.46 Score=47.62 Aligned_cols=69 Identities=29% Similarity=0.298 Sum_probs=44.7
Q ss_pred cCCeeEeeCCCCCHH------------HHHH---HHHHcCCCCCCCCCCcEEEeeceecCCC------CcHHHHHHHHHh
Q 021077 53 KSPVTICGDIHGQFH------------DLAE---LFQIGGKCPQECPDTNYLFMGDYVDRGY------YSVETVTLLVAL 111 (317)
Q Consensus 53 ~~~i~viGDiHG~~~------------~l~~---ll~~~~~~~~~~~~~~~vfLGD~vDrG~------~s~evl~~l~~l 111 (317)
+-+|+-..|+||++. .+.+ +++..... .++..+|=.||+++..+ ....++.++-.+
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~---~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m 102 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAE---NKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL 102 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhh---cCCeEEEeCCcccCCccccccccCCChHHHHHhhc
Confidence 447899999999999 3433 33333322 13445666899999844 334566666666
Q ss_pred HhhCCCcEEEECCCchhh
Q 021077 112 KVRYPQRITILRGNHESR 129 (317)
Q Consensus 112 ~~~~p~~v~~lrGNHE~~ 129 (317)
+.. .+-.||||.-
T Consensus 103 ~yD-----a~tiGNHEFd 115 (517)
T COG0737 103 GYD-----AMTLGNHEFD 115 (517)
T ss_pred CCc-----EEeecccccc
Confidence 543 3688999974
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=85.02 E-value=1.1 Score=42.08 Aligned_cols=69 Identities=25% Similarity=0.238 Sum_probs=40.9
Q ss_pred CeeEeeCCCCCHH------HHHHHHHHcCCCC-CCCCCCcEEEeeceecCCCC-------------cHHHHHHHHHhHhh
Q 021077 55 PVTICGDIHGQFH------DLAELFQIGGKCP-QECPDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 114 (317)
Q Consensus 55 ~i~viGDiHG~~~------~l~~ll~~~~~~~-~~~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~l~~~ 114 (317)
.|+-..|+||++. .+..+++...... ...++..++..||.+..++. ...+++++-++...
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D 81 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ 81 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc
Confidence 3677899999964 3333444432110 00145567778999875543 33456666565433
Q ss_pred CCCcEEEECCCchh
Q 021077 115 YPQRITILRGNHES 128 (317)
Q Consensus 115 ~p~~v~~lrGNHE~ 128 (317)
.+..||||.
T Consensus 82 -----a~tlGNHEF 90 (313)
T cd08162 82 -----AIALGNHEF 90 (313)
T ss_pred -----EEecccccc
Confidence 467999995
No 118
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=84.25 E-value=0.96 Score=41.75 Aligned_cols=70 Identities=21% Similarity=0.148 Sum_probs=38.5
Q ss_pred CeeEeeCCCCCHH-------------HHHHHHHHcCCC-CCCCCCCcEEEeeceecCCCCc-------HHHHHHHHHhHh
Q 021077 55 PVTICGDIHGQFH-------------DLAELFQIGGKC-PQECPDTNYLFMGDYVDRGYYS-------VETVTLLVALKV 113 (317)
Q Consensus 55 ~i~viGDiHG~~~-------------~l~~ll~~~~~~-~~~~~~~~~vfLGD~vDrG~~s-------~evl~~l~~l~~ 113 (317)
.|+.+.|+||++. .+.++.+..... ....++..++-.||.+..-+.+ ..+++++-.+..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 5788999999864 123333222110 0001334556689998765432 224444444432
Q ss_pred hCCCcEEEECCCchhh
Q 021077 114 RYPQRITILRGNHESR 129 (317)
Q Consensus 114 ~~p~~v~~lrGNHE~~ 129 (317)
=.+..||||..
T Consensus 87 -----Da~tlGNHEFd 97 (282)
T cd07407 87 -----DLLTIGNHELY 97 (282)
T ss_pred -----cEEeecccccC
Confidence 34789999984
No 119
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=83.70 E-value=15 Score=31.70 Aligned_cols=85 Identities=18% Similarity=0.273 Sum_probs=64.8
Q ss_pred CcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChH----------------HHHHHhCChh
Q 021077 86 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 149 (317)
Q Consensus 86 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~----------------e~~~~~~~~~ 149 (317)
..+|++|- |-+.-|++.++..++..|-++.+ +.|+-|.|..+....|.. |..+.| -..
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 56888885 88899999999999999877665 489999988876554432 333444 246
Q ss_pred hHHHHHHHhhcCCeEEEEeCCEEEEcC
Q 021077 150 IWKIFTDLFDYFPLTALVESEIFCLHG 176 (317)
Q Consensus 150 ~~~~~~~~f~~lPl~~~v~~~~l~vHg 176 (317)
++..+...+.++++...+.-+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 777888888888999888767777776
No 120
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.65 E-value=1.4 Score=45.63 Aligned_cols=69 Identities=19% Similarity=0.161 Sum_probs=43.6
Q ss_pred ccCCeeEeeCCCCCHHH----------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcH-------------
Q 021077 52 VKSPVTICGDIHGQFHD----------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSV------------- 102 (317)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~------------- 102 (317)
..-+|+...|+||++.. +..+++..... .++..+|-.||.+...+.+-
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e---~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~ 100 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAE---AKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVH 100 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHh---CCCEEEEECCCcCCCchhhhhhhhccccCCCcc
Confidence 45578999999999743 33444444322 14566777999987655421
Q ss_pred HHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 103 ETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 103 evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
.++..+-.+.. =....||||.
T Consensus 101 p~i~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 101 PVYKAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred hHHHHHHhcCC-----cEEeccchhh
Confidence 25555555543 3478899996
No 121
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=81.87 E-value=1.4 Score=45.32 Aligned_cols=66 Identities=20% Similarity=0.157 Sum_probs=41.0
Q ss_pred CeeEeeCCCCCHHH----------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-------------HHHH
Q 021077 55 PVTICGDIHGQFHD----------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-------------VETV 105 (317)
Q Consensus 55 ~i~viGDiHG~~~~----------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-------------~evl 105 (317)
+|+-..|+||++.. +..+++..... .++..++-.||.+...+.+ ..++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e---~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAE---VKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhh---CCCeEEEECCCcCCCccchhhhhhccccCCCcChHH
Confidence 67889999999753 33444444322 1345677789998765432 2345
Q ss_pred HHHHHhHhhCCCcEEEECCCchh
Q 021077 106 TLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 106 ~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
+++-.+.. =.+..||||.
T Consensus 81 ~~mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 81 KAMNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HHHhhcCc-----cEEecccccc
Confidence 55555543 3478899995
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.40 E-value=2.1 Score=47.32 Aligned_cols=67 Identities=27% Similarity=0.296 Sum_probs=39.9
Q ss_pred CCeeEeeCCCCCHHH----------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCC--------------cHH
Q 021077 54 SPVTICGDIHGQFHD----------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYY--------------SVE 103 (317)
Q Consensus 54 ~~i~viGDiHG~~~~----------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~--------------s~e 103 (317)
-+|+..+|+||++.. +..+++..... .++..++-.||.+...+- ...
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~---~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~ 118 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKE---NPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHP 118 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHh---CCCeEEEeCCCccCCChhhhHHhhhccccCCCcCH
Confidence 468999999998643 33445444322 134444458999986651 123
Q ss_pred HHHHHHHhHhhCCCcEEEECCCchh
Q 021077 104 TVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 104 vl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
++..+-.+.. =.+..||||.
T Consensus 119 ~i~~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 119 MIKAMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHHHHhhcCc-----cEEeeccccc
Confidence 4444444432 3467999996
No 123
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=80.31 E-value=0.09 Score=50.04 Aligned_cols=193 Identities=12% Similarity=-0.001 Sum_probs=104.2
Q ss_pred CCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhhhhCChHHHHHHhCC---hhhHHHHHHHhhcC
Q 021077 85 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN---ANIWKIFTDLFDYF 161 (317)
Q Consensus 85 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~---~~~~~~~~~~f~~l 161 (317)
.-..|+++++.+++.+.+..+.+-......+-.+--..++||+... .+.+++...-+. -.+++..++-+..+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccc
Confidence 4568999999999999999988888877776666668899995432 222222211111 23455566667777
Q ss_pred CeEEEEeCCEEEEcCCCCCCccchhhhhhcc--cCccCCCCCC-ccccccCCCCCCCCCCcCCCCCccccChH--HHHHH
Q 021077 162 PLTALVESEIFCLHGGLSPSIETLDNIRNFD--RVQEVPHEGP-MCDLLWSDPDDRCGWGISPRGAGYTFGQD--ISEQF 236 (317)
Q Consensus 162 Pl~~~v~~~~l~vHgGi~~~~~~~~~i~~i~--r~~~~~~~~~-~~dllWsdp~~~~~~~~~~rg~~~~fg~~--~~~~f 236 (317)
+..++ ++++++.|++..|......++..+. ...+..-++. -..++-++-.....|...+ ....||.+ ..-++
T Consensus 123 l~k~i-~~~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~k~tw~~~~--~~p~~gyDfwyqpr~ 199 (476)
T KOG0918|consen 123 LEKTI-DPDILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNEKGTWEKPG--HSPLFGYDFWYQPRH 199 (476)
T ss_pred eeeee-chhhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccceecccccCC--Cccccccceeecccc
Confidence 77766 5699999999998765433333221 1111110100 1122222222223444322 12122221 11222
Q ss_pred HHhCCCcEEEecccccccceEE--ecCCeEEEEEcCCCCcCCCCCcEEEEEEeCC
Q 021077 237 NHTNNLKLIARAHQLVMDGFNW--AHEQKVVTIFSAPNYCYRCGNMASILEVDDC 289 (317)
Q Consensus 237 l~~~~~~~iIrGH~~~~~G~~~--~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~ 289 (317)
..........+.|.- .|+.. ..++ .+.++..-|....++..+.+.++.+
T Consensus 200 ~~mIstewgap~~~~--~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 200 NVMISTEWGAPNALR--KGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ceEEeecccCchhhh--cCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 233334444444443 34433 3333 6667777776666777788877764
No 124
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=79.76 E-value=2 Score=41.56 Aligned_cols=71 Identities=11% Similarity=0.037 Sum_probs=42.3
Q ss_pred CCeeEeeCC-CCCHHHH--HHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHH------HHHHHHHhH---hhCCCcEEE
Q 021077 54 SPVTICGDI-HGQFHDL--AELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVE------TVTLLVALK---VRYPQRITI 121 (317)
Q Consensus 54 ~~i~viGDi-HG~~~~l--~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e------vl~~l~~l~---~~~p~~v~~ 121 (317)
-+++++||- -|.+... .+.+...... -+.+-+|-+||-++.|..++. ..+.++.-. .+- ..++
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~---~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~ 101 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKN---ERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFT 101 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHh---CCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEE
Confidence 379999995 3444433 2233333221 156778889998888876543 344444221 122 3899
Q ss_pred ECCCchhh
Q 021077 122 LRGNHESR 129 (317)
Q Consensus 122 lrGNHE~~ 129 (317)
++||||..
T Consensus 102 vLGNHDy~ 109 (394)
T PTZ00422 102 VLGQADWD 109 (394)
T ss_pred eCCccccc
Confidence 99999973
No 125
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=79.44 E-value=2.6 Score=38.47 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=42.5
Q ss_pred cCCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCC-CcEEEECCCchhhhh
Q 021077 53 KSPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP-QRITILRGNHESRQI 131 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p-~~v~~lrGNHE~~~~ 131 (317)
..+++.|+|-|....+.. ..+ ..|.++-+||+-.-|. +-||..+=..+-. .| .+=+.|+||||...-
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p----~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIP----DGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELTFD 128 (305)
T ss_pred ceEEEEecCcccccCccc------cCC----CCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeeccceeec
Confidence 458999999998766533 234 5677888999866553 4455554333221 12 234579999998643
No 126
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=79.29 E-value=7.9 Score=35.82 Aligned_cols=77 Identities=14% Similarity=0.275 Sum_probs=49.1
Q ss_pred cCCeeEeeCCCC----CHHHHHHHHHHcC-CCCCCCCCCcEEEeeceecCC----CCc----HHHHHHHHHh-HhhCC--
Q 021077 53 KSPVTICGDIHG----QFHDLAELFQIGG-KCPQECPDTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYP-- 116 (317)
Q Consensus 53 ~~~i~viGDiHG----~~~~l~~ll~~~~-~~~~~~~~~~~vfLGD~vDrG----~~s----~evl~~l~~l-~~~~p-- 116 (317)
..+++|+||+|= .+++|.++|+... ..+.......+|++|+++-+. ..+ .+-.+-|..+ ...+|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 357999999984 5667777887763 221112367899999997652 222 2334444432 23444
Q ss_pred ---CcEEEECCCchhh
Q 021077 117 ---QRITILRGNHESR 129 (317)
Q Consensus 117 ---~~v~~lrGNHE~~ 129 (317)
.++++++|-.|-.
T Consensus 107 ~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 107 LEHCYLIFIPGINDPC 122 (291)
T ss_pred HhcCeEEEECCCCCCC
Confidence 5899999999974
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=77.26 E-value=1.1 Score=45.40 Aligned_cols=72 Identities=24% Similarity=0.126 Sum_probs=39.0
Q ss_pred cCCeeEeeCCCCCHH-------HH---HHHHHHcCCCC-CCCCCCcEEEeeceecCCCCc-----HHHHHHHHHhHhhCC
Q 021077 53 KSPVTICGDIHGQFH-------DL---AELFQIGGKCP-QECPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYP 116 (317)
Q Consensus 53 ~~~i~viGDiHG~~~-------~l---~~ll~~~~~~~-~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p 116 (317)
+-.|+.+.|+||++. .+ ..+++...... ...++..++..||.+...+.+ ..+++++-++...
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D-- 111 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD-- 111 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC--
Confidence 346888999999875 22 23343322100 001455666689998643321 2344445444322
Q ss_pred CcEEEECCCchhh
Q 021077 117 QRITILRGNHESR 129 (317)
Q Consensus 117 ~~v~~lrGNHE~~ 129 (317)
+ +..||||.-
T Consensus 112 --a-~tlGNHEFD 121 (551)
T PRK09558 112 --A-MAVGNHEFD 121 (551)
T ss_pred --E-EcccccccC
Confidence 4 445999963
No 128
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.26 E-value=2.8 Score=44.33 Aligned_cols=68 Identities=22% Similarity=0.172 Sum_probs=41.6
Q ss_pred cCCeeEeeCCCCCHHHH----------------HHHHHHcCCCCCCCCCCcEEEeeceecCCCCc--------------H
Q 021077 53 KSPVTICGDIHGQFHDL----------------AELFQIGGKCPQECPDTNYLFMGDYVDRGYYS--------------V 102 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~l----------------~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s--------------~ 102 (317)
+-+|+-..|+||++... ..+++..... .++..++-.||.+..-+.+ .
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae---~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~ 191 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKE---NPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQH 191 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHh---CCCEEEEecCCCCCCCcccchhhhccccccCcch
Confidence 34688899999996432 2334433221 1455677789998764432 1
Q ss_pred HHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 103 ETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 103 evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
.++.++-.|.. =.+-.||||.
T Consensus 192 P~i~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 192 PMYAALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHHHHhccCC-----CEEEechhhc
Confidence 35555555543 3478899996
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=75.33 E-value=4.2 Score=41.18 Aligned_cols=66 Identities=20% Similarity=0.125 Sum_probs=38.6
Q ss_pred eeEeeCCCCCHHH---------------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHHHH
Q 021077 56 VTICGDIHGQFHD---------------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTLLV 109 (317)
Q Consensus 56 i~viGDiHG~~~~---------------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~ 109 (317)
|+-+.|+||++.. +..+++..... .++..++..||.+...+.+ ..+++++-
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~---~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N 79 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAE---SKNALVLHAGDAIIGTLYFTLFGGRADAALMN 79 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhh---CCCeEEEECCCCCCCccchhhcCCHHHHHHHh
Confidence 5677888887643 23334433222 1456677789998765432 23444444
Q ss_pred HhHhhCCCcEEEECCCchhh
Q 021077 110 ALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 110 ~l~~~~p~~v~~lrGNHE~~ 129 (317)
++. --.+..||||.-
T Consensus 80 ~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 80 AAG-----FDFFTLGNHEFD 94 (550)
T ss_pred ccC-----CCEEEecccccc
Confidence 443 245789999963
No 130
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=72.80 E-value=10 Score=37.94 Aligned_cols=57 Identities=19% Similarity=0.190 Sum_probs=41.6
Q ss_pred cCCeeEeeCCCC------------CHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHh
Q 021077 53 KSPVTICGDIHG------------QFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKV 113 (317)
Q Consensus 53 ~~~i~viGDiHG------------~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~ 113 (317)
..||.|-.|+|= .+..+..+|+.+... ..|-++.-||++.-..-|..+|..+..+..
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~----~VDmiLlGGDLFHeNkPSr~~L~~~i~lLR 81 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQEN----DVDMILLGGDLFHENKPSRKTLHRCLELLR 81 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhc----CCcEEEecCcccccCCccHHHHHHHHHHHH
Confidence 458999999985 455677888887765 567777788999877777776666555443
No 131
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=70.85 E-value=2.7 Score=41.07 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=35.5
Q ss_pred CCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhhhh
Q 021077 85 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 133 (317)
Q Consensus 85 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~ 133 (317)
.|++=++||+-||||++-.+++-|...- .+-+-=||||...+..
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWmgA 234 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWMGA 234 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEeec
Confidence 4778889999999999999999988752 4667789999765544
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=67.41 E-value=3 Score=38.15 Aligned_cols=70 Identities=26% Similarity=0.316 Sum_probs=0.0
Q ss_pred CeeEeeC--CCCCHHHHHHHHHHcCCCCCCCCCCcEEEeecee-cCCC---------CcHHHHHHHHHhHhhCCCcEEEE
Q 021077 55 PVTICGD--IHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYV-DRGY---------YSVETVTLLVALKVRYPQRITIL 122 (317)
Q Consensus 55 ~i~viGD--iHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~v-DrG~---------~s~evl~~l~~l~~~~p~~v~~l 122 (317)
++.|||| .+|.+..-+..++..... ..-..+-++.+||-+ |-|. ++.+-+.---+|... -+.+
T Consensus 45 sflvvGDwGr~g~~nqs~va~qmg~ig-e~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkp----Wy~v 119 (336)
T KOG2679|consen 45 SFLVVGDWGRRGSFNQSQVALQMGEIG-EKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKP----WYSV 119 (336)
T ss_pred EEEEEcccccCCchhHHHHHHHHHhHH-HhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccc----hhhh
Q ss_pred CCCchhh
Q 021077 123 RGNHESR 129 (317)
Q Consensus 123 rGNHE~~ 129 (317)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=66.10 E-value=6.1 Score=41.71 Aligned_cols=68 Identities=21% Similarity=0.166 Sum_probs=40.6
Q ss_pred cCCeeEeeCCCCCHHH----------------HHHHHHHcCCCCCCCCCCcEEEeeceecCCCC----------------
Q 021077 53 KSPVTICGDIHGQFHD----------------LAELFQIGGKCPQECPDTNYLFMGDYVDRGYY---------------- 100 (317)
Q Consensus 53 ~~~i~viGDiHG~~~~----------------l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~---------------- 100 (317)
.-+|+...|+||++.. +..+++..... .++..+|-.||.+-..+.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e---~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~ 115 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREE---AKNSVLFDDGDALQGTPLGDYVANKINDPKKPVD 115 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHh---CCCeEEEECCCCCCCchHHHHHhhcccccccccc
Confidence 4478999999999642 22344433221 145667778998844332
Q ss_pred ---cHHHHHHHHHhHhhCCCcEEEECCCchh
Q 021077 101 ---SVETVTLLVALKVRYPQRITILRGNHES 128 (317)
Q Consensus 101 ---s~evl~~l~~l~~~~p~~v~~lrGNHE~ 128 (317)
...+++++-.|.. =.+..||||.
T Consensus 116 ~~~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 116 PSYTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cccchHHHHHHhccCC-----CEEecccccc
Confidence 1235555555543 3468999995
No 134
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=60.14 E-value=20 Score=31.85 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=27.6
Q ss_pred HHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCc
Q 021077 234 EQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYC 274 (317)
Q Consensus 234 ~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 274 (317)
.+.+-..|+++||.||+++..+++.. ++++ -++|..|++
T Consensus 200 a~~l~~~G~D~IiG~H~Hv~q~~E~~-~~~~-I~YSlGNfi 238 (239)
T cd07381 200 ARALIDAGADLVIGHHPHVLQGIEIY-KGKL-IFYSLGNFV 238 (239)
T ss_pred HHHHHHCCCCEEEcCCCCcCCCeEEE-CCEE-EEEcCCCcc
Confidence 33444469999999999999999874 4454 347765553
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=50.74 E-value=14 Score=37.61 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=35.5
Q ss_pred CCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhhhh
Q 021077 85 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 131 (317)
Q Consensus 85 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 131 (317)
.|++-++||+.||||.+-.+++.|+.. .+|=+-=||||.-.+
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 467889999999999999999999864 257788999997554
No 136
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=49.72 E-value=36 Score=30.23 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=26.5
Q ss_pred HHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCC
Q 021077 236 FNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 273 (317)
Q Consensus 236 fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y 273 (317)
.+-..|+++||.||+++..+++.. ++++| ++|-.|+
T Consensus 200 ~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 200 ALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 333369999999999999998865 45555 5766555
No 137
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=45.50 E-value=35 Score=25.20 Aligned_cols=70 Identities=11% Similarity=0.041 Sum_probs=47.4
Q ss_pred CCeeEeeCCCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCC
Q 021077 54 SPVTICGDIHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 125 (317)
Q Consensus 54 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGN 125 (317)
..+.||=|---+.+.+.++++.+.... .....++++|+.-|.|..+.+....+.++..++...+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~--~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELY--PKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHC--TTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhc--cCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 356788887678888888887664210 0457788899999988888887777777777766665555444
No 138
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.94 E-value=40 Score=31.73 Aligned_cols=61 Identities=23% Similarity=0.313 Sum_probs=37.9
Q ss_pred HHhhCCCcccccCCeeEeeCCC-CCHHHHHHHHHHcCCCCCCCCCCcEEEeeceec--CCCCcHHHHHHHHHhHh
Q 021077 42 ILMEESNVQPVKSPVTICGDIH-GQFHDLAELFQIGGKCPQECPDTNYLFMGDYVD--RGYYSVETVTLLVALKV 113 (317)
Q Consensus 42 ~~~~e~~~~~~~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vD--rG~~s~evl~~l~~l~~ 113 (317)
-++.-|..++..+.+.+|||.| |||.++... ....++-+-|+=. -|+....++.+..+|..
T Consensus 45 ~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~-----------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 45 DMKTWPWSLPKTPFTWLCGDAHLGNFGAARNS-----------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHhcCccccCCCCceEEecccccccchhhccC-----------CCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 3455566777788999999999 677665431 1223333555521 25666777777777653
No 139
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=41.35 E-value=1.6e+02 Score=26.32 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=39.3
Q ss_pred CeeEeeCCCCC--H--HHHHHHHH-HcCCCCCCCCCCcEEEeecee-cCCCCcH------HHHHHHHH-hHhhCCCcEEE
Q 021077 55 PVTICGDIHGQ--F--HDLAELFQ-IGGKCPQECPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYPQRITI 121 (317)
Q Consensus 55 ~i~viGDiHG~--~--~~l~~ll~-~~~~~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-l~~~~p~~v~~ 121 (317)
+++++||.=.. . ..+.+.+. .+... ..+-+|++||++ +-|..+. +.+..++. +.... -++.
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~----~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~--P~~~ 75 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAEL----GPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV--PWYL 75 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhc----CCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC--CeEE
Confidence 57899997653 2 23333333 33323 457899999987 5553221 22222222 22223 3999
Q ss_pred ECCCchhh
Q 021077 122 LRGNHESR 129 (317)
Q Consensus 122 lrGNHE~~ 129 (317)
++||||..
T Consensus 76 v~GNHD~~ 83 (277)
T cd07378 76 VLGNHDYS 83 (277)
T ss_pred ecCCcccC
Confidence 99999975
No 140
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=38.64 E-value=1.8e+02 Score=28.46 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=48.6
Q ss_pred CCeeEeeCCCC-CHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhC-CCcEEEECC
Q 021077 54 SPVTICGDIHG-QFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRG 124 (317)
Q Consensus 54 ~~i~viGDiHG-~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~-p~~v~~lrG 124 (317)
..+.||=|-|. +.+.+.+.|+.+... +..+++.+||+...|+.+.+.-.-+.+..... .+.++ +-|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~----~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEM----PGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhC----CCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 45788999555 688899888877653 34678999999999999988877776655443 34454 446
No 141
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=35.69 E-value=36 Score=30.56 Aligned_cols=90 Identities=22% Similarity=0.328 Sum_probs=45.7
Q ss_pred CCcEEEeecee-cCCCC---cHHHHHHHHHhHh-------hCCCcEEEECCCchhhhhhhhhCChHHHHHHhCChhh-HH
Q 021077 85 DTNYLFMGDYV-DRGYY---SVETVTLLVALKV-------RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANI-WK 152 (317)
Q Consensus 85 ~~~~vfLGD~v-DrG~~---s~evl~~l~~l~~-------~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~-~~ 152 (317)
.+--+||||-. ||-.. .--++.+|-++.. +-..+|+.|.||||.- .++.| .+++....+ -.
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein-~ngny------~arlanhkls~g 157 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEIN-FNGNY------MARLANHKLSAG 157 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceec-cCchH------HHHHhhCCCCcc
Confidence 45578888864 44211 1224455544443 1335899999999974 22222 122211111 11
Q ss_pred HHHHHhhcCCeEEEEe-CCEEEEcCCCCCC
Q 021077 153 IFTDLFDYFPLTALVE-SEIFCLHGGLSPS 181 (317)
Q Consensus 153 ~~~~~f~~lPl~~~v~-~~~l~vHgGi~~~ 181 (317)
.-.+....+|++..-. .+++-.|-||-.+
T Consensus 158 DTYnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 158 DTYNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred chhhccccccccccCcchhhhhcccCceec
Confidence 1223455666654421 3688888888543
No 142
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=33.69 E-value=84 Score=28.03 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=28.3
Q ss_pred HHHHHhCCCcEEEecccccccceEEecCCeEEEEEcCCCCc
Q 021077 234 EQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYC 274 (317)
Q Consensus 234 ~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 274 (317)
.+.+-..|+++||.+|.++..|++.. ++++| ++|..|+.
T Consensus 209 a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 209 ARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 33344479999999999999999976 55544 47665553
No 143
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=32.85 E-value=36 Score=31.11 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=26.6
Q ss_pred cEEEeeceecCCCCcHH-HHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 87 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 87 ~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
+++|+||++.+ ...+ +-..|-+++.+++..+++. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 68999999954 2233 3456777888887655554 66765
No 144
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=29.95 E-value=64 Score=29.26 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=28.0
Q ss_pred cEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEECCCchhh
Q 021077 87 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 129 (317)
Q Consensus 87 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 129 (317)
+++|+||+|.+.- -.-+-..|-+++.+++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 5899999998743 2345667888888887666555 66654
No 145
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=29.30 E-value=2.5e+02 Score=21.55 Aligned_cols=33 Identities=27% Similarity=0.611 Sum_probs=23.1
Q ss_pred CCCcEEEeeceecCCCCcHHHHHHHHHhHhhCCCcEEEE
Q 021077 84 PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 122 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 122 (317)
+..++|++||= |....|+..-+. .++|++|..+
T Consensus 63 P~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 63 PERKFILIGDS---GQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred CCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEEE
Confidence 57889999984 555577776554 4688877643
No 146
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=28.60 E-value=23 Score=29.57 Aligned_cols=46 Identities=24% Similarity=0.463 Sum_probs=28.4
Q ss_pred cChHHHHHHHHhCC---------CcEEEecccccccceEEecCCeEEEEEcCCCCcCCCCC
Q 021077 228 FGQDISEQFNHTNN---------LKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGN 279 (317)
Q Consensus 228 fg~~~~~~fl~~~~---------~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n 279 (317)
.++...+.||.+-| +..=|||+=+++..+.+..+ +.+|.||.+++.
T Consensus 22 ~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CGk 76 (158)
T PF10083_consen 22 KNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCGK 76 (158)
T ss_pred cCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCCC
Confidence 33455566776654 44558888776433333222 559999988876
No 147
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=27.38 E-value=3.3e+02 Score=26.97 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCcccccCCeeEeeC-CCCCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHH
Q 021077 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGD-IHGQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETV 105 (317)
Q Consensus 27 ~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGD-iHG~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl 105 (317)
++.+++..-+.+.+.+=.+.. .......+.+|=| ..++.+.++..++.....+ +...++.|||+..=|..|.++=
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~---~~~~i~VlGdM~ELG~~s~~~H 375 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALP---GRKGIAVLGDMLELGEESEELH 375 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCc---cCCcEEEeCChhhhCccHHHHH
Confidence 555665544443333221111 1223445677777 7899999999888877652 2333899999999999999887
Q ss_pred HHHHHhHhhCCCcEEEECCC
Q 021077 106 TLLVALKVRYPQRITILRGN 125 (317)
Q Consensus 106 ~~l~~l~~~~p~~v~~lrGN 125 (317)
..+-+......-...++-|.
T Consensus 376 ~~v~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 376 EEVGEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHHHHhcCceEEEEEcc
Confidence 77777665543346677787
No 148
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.03 E-value=38 Score=24.54 Aligned_cols=22 Identities=27% Similarity=0.452 Sum_probs=19.8
Q ss_pred ceecCCCCcHHHHHHHHHhHhh
Q 021077 93 DYVDRGYYSVETVTLLVALKVR 114 (317)
Q Consensus 93 D~vDrG~~s~evl~~l~~l~~~ 114 (317)
|++++|-+|+.++.++..++.+
T Consensus 23 NLi~~GLDSiR~M~L~~~wR~~ 44 (74)
T COG3433 23 NLIDYGLDSIRMMALLERWRKR 44 (74)
T ss_pred hHHHhchhHHHHHHHHHHHHHc
Confidence 5789999999999999999865
No 149
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=25.68 E-value=3.4e+02 Score=22.67 Aligned_cols=57 Identities=23% Similarity=0.378 Sum_probs=40.2
Q ss_pred eEeeCCCCCHHHHHHHHH-HcCC--------CCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHh
Q 021077 57 TICGDIHGQFHDLAELFQ-IGGK--------CPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKV 113 (317)
Q Consensus 57 ~viGDiHG~~~~l~~ll~-~~~~--------~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~ 113 (317)
++.+=.+||-..+.+.+. .++. .+......-+||+|--+|+|.-+-++.++|..|+.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~ 67 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG 67 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC
Confidence 455667888888765443 3333 11112456799999999999999999999998763
No 150
>PF06569 DUF1128: Protein of unknown function (DUF1128); InterPro: IPR009507 This family consists of several short, hypothetical bacterial proteins of unknown function.
Probab=25.06 E-value=1.3e+02 Score=21.71 Aligned_cols=38 Identities=18% Similarity=0.351 Sum_probs=31.1
Q ss_pred CCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 021077 5 SLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEI 42 (317)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 42 (317)
..+...++++..+-+-+++...|+.+|+..|.++.-.+
T Consensus 32 ~f~~~~yedl~diy~~V~~K~~fS~sEm~aI~~ELG~L 69 (71)
T PF06569_consen 32 DFSEEKYEDLKDIYEMVMSKDSFSPSEMQAIAEELGQL 69 (71)
T ss_pred hCChhhHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhh
Confidence 45667788888999999988899999999998876554
No 151
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=24.50 E-value=2e+02 Score=26.69 Aligned_cols=90 Identities=19% Similarity=0.239 Sum_probs=50.3
Q ss_pred CCCcEEEeeceecCCCCcHHHHHHHHHhH-hhCC----CcEEEECCCchhhhhhhhhCChHHHHHHhCChhhHHHHHH-H
Q 021077 84 PDTNYLFMGDYVDRGYYSVETVTLLVALK-VRYP----QRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTD-L 157 (317)
Q Consensus 84 ~~~~~vfLGD~vDrG~~s~evl~~l~~l~-~~~p----~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~-~ 157 (317)
...++|+|||+-=--+..++-|..+++.- ..+| +-.+++.||-=..-+.. +.. ....| .+-++.+.+ .
T Consensus 26 ~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~--~~~--~~~~y--k~~Fd~La~ll 99 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDY--NRN--FHKVY--IKGFEKLSVML 99 (291)
T ss_pred CceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccC--CCC--chHHH--HHHHHHHHHHH
Confidence 56789999998433344444444444422 2223 56889999976654331 111 11112 234555555 4
Q ss_pred hhcCCeEEEEeCCEEEEcCCCCC
Q 021077 158 FDYFPLTALVESEIFCLHGGLSP 180 (317)
Q Consensus 158 f~~lPl~~~v~~~~l~vHgGi~~ 180 (317)
++..|.... .-+++||-|-=.|
T Consensus 100 ls~fp~L~~-~s~fVFVPGpnDP 121 (291)
T PTZ00235 100 ISKFKLILE-HCYLIFIPGINDP 121 (291)
T ss_pred HHhChHHHh-cCeEEEECCCCCC
Confidence 677776555 4689999984333
No 152
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.94 E-value=2.8e+02 Score=22.35 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCc-----HHHHHHHHHhHhhCCCcEEEE---CCCchhh
Q 021077 66 FHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITIL---RGNHESR 129 (317)
Q Consensus 66 ~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l---rGNHE~~ 129 (317)
++.|.+.++..+.. ..--++|+|+-.|++.+| +...-.+..-...+|..++++ -||-+..
T Consensus 12 ~e~~~~~~~~~~n~----~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENG----KTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCC----ceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 56777888877665 456678899998886544 444444444333677776654 5777654
No 153
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=23.76 E-value=2.9e+02 Score=26.66 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=47.0
Q ss_pred cCCeeEeeCCC-CCHHHHHHHHHHcCCCCCCCCCCcEEEeeceecCCCCcHHHHHHHHHhHhhCC-CcEEEECCCch
Q 021077 53 KSPVTICGDIH-GQFHDLAELFQIGGKCPQECPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP-QRITILRGNHE 127 (317)
Q Consensus 53 ~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p-~~v~~lrGNHE 127 (317)
...+.+|=|-+ -+.+.+.+.|+.+... +..+++++|+.-.-|+.+.+.-..+.+....+. +.++ +-|...
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~----~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi-~~g~~~ 366 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARF----PGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVF-LVGEEA 366 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhC----CCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEE-EECHHH
Confidence 34578888854 4899999999887643 246788899998778877766555555444443 4444 455443
Done!