Query 021080
Match_columns 317
No_of_seqs 170 out of 2056
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 12:27:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021080.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021080hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 1.7E-38 6E-43 281.0 28.8 236 54-316 14-299 (302)
2 1zgk_A Kelch-like ECH-associat 100.0 1.2E-38 4.3E-43 282.9 27.5 239 54-315 23-308 (308)
3 3ii7_A Kelch-like protein 7; p 100.0 4.5E-38 1.5E-42 278.8 29.7 233 55-315 11-293 (306)
4 2vpj_A Kelch-like protein 12; 100.0 1.8E-37 6.2E-42 274.2 26.2 236 54-316 13-300 (301)
5 2woz_A Kelch repeat and BTB do 100.0 2.1E-36 7.2E-41 269.7 19.3 249 26-316 27-307 (318)
6 4asc_A Kelch repeat and BTB do 100.0 2.7E-36 9.3E-41 268.6 19.0 249 26-315 16-296 (315)
7 2uvk_A YJHT; unknown function, 100.0 7.2E-35 2.5E-39 263.7 22.6 229 54-315 18-315 (357)
8 4asc_A Kelch repeat and BTB do 100.0 8.5E-35 2.9E-39 258.9 22.6 218 55-315 4-242 (315)
9 2woz_A Kelch repeat and BTB do 100.0 7E-34 2.4E-38 253.3 23.3 219 54-315 14-252 (318)
10 2uvk_A YJHT; unknown function, 100.0 2E-32 6.9E-37 247.6 15.2 251 32-305 42-354 (357)
11 1zgk_A Kelch-like ECH-associat 100.0 4.8E-31 1.7E-35 234.0 22.4 200 91-315 14-261 (308)
12 2xn4_A Kelch-like protein 2; s 100.0 1.1E-29 3.9E-34 224.3 24.6 195 96-315 10-250 (302)
13 3ii7_A Kelch-like protein 7; p 100.0 5.5E-29 1.9E-33 220.3 23.6 187 101-315 11-246 (306)
14 2vpj_A Kelch-like protein 12; 100.0 6.4E-29 2.2E-33 219.3 23.4 194 99-315 12-252 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 1.6E-28 5.4E-33 240.3 24.3 205 54-299 396-641 (695)
16 1k3i_A Galactose oxidase precu 100.0 1.3E-27 4.3E-32 233.0 22.2 241 27-315 170-518 (656)
17 2zwa_A Leucine carboxyl methyl 99.9 6.9E-25 2.4E-29 214.5 20.9 182 91-316 388-606 (695)
18 1k3i_A Galactose oxidase precu 99.9 6.4E-23 2.2E-27 199.8 17.8 211 67-315 166-464 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.8 3.7E-06 1.3E-10 77.1 24.2 46 3-48 17-62 (445)
20 3v7d_B Cell division control p 98.7 4.7E-06 1.6E-10 76.6 23.8 42 3-44 13-55 (464)
21 1p22_A F-BOX/WD-repeat protein 98.7 9.1E-07 3.1E-11 81.0 18.2 44 3-46 9-56 (435)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.5 6.6E-08 2.2E-12 61.4 4.2 43 3-45 7-49 (53)
23 2e31_A FBS1, F-box only protei 98.1 1.4E-06 4.8E-11 75.2 3.9 49 3-51 49-98 (297)
24 3dsm_A Uncharacterized protein 98.0 0.0024 8.3E-08 55.9 23.2 184 66-297 16-216 (328)
25 3dsm_A Uncharacterized protein 98.0 0.0029 1E-07 55.4 23.2 180 55-292 53-254 (328)
26 3mbr_X Glutamine cyclotransfer 98.0 0.0016 5.5E-08 54.6 20.0 153 93-292 22-180 (243)
27 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0016 5.6E-08 57.9 19.6 113 173-299 96-215 (376)
28 3nol_A Glutamine cyclotransfer 97.8 0.0019 6.4E-08 54.7 18.1 151 95-292 46-202 (262)
29 3mbr_X Glutamine cyclotransfer 97.8 0.0026 9E-08 53.3 18.6 172 55-269 30-225 (243)
30 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.004 1.4E-07 55.3 20.9 146 54-243 52-217 (376)
31 3nol_A Glutamine cyclotransfer 97.7 0.002 6.8E-08 54.6 15.9 172 55-269 52-246 (262)
32 3nok_A Glutaminyl cyclase; bet 97.7 0.0048 1.6E-07 52.3 17.6 148 95-292 58-211 (268)
33 2iwa_A Glutamine cyclotransfer 97.5 0.02 7E-07 48.6 19.7 132 148-292 44-182 (266)
34 2iwa_A Glutamine cyclotransfer 97.5 0.016 5.5E-07 49.3 18.6 171 55-269 31-227 (266)
35 3nok_A Glutaminyl cyclase; bet 97.0 0.0081 2.8E-07 50.9 11.4 103 174-292 58-165 (268)
36 1rwi_B Serine/threonine-protei 96.9 0.14 4.8E-06 42.5 19.3 181 55-292 34-223 (270)
37 3l2o_B F-box only protein 4; s 96.9 0.00032 1.1E-08 60.1 2.0 50 2-51 2-51 (312)
38 1l0q_A Surface layer protein; 96.9 0.033 1.1E-06 49.2 15.2 178 56-292 2-190 (391)
39 1l0q_A Surface layer protein; 96.8 0.034 1.2E-06 49.1 14.7 179 55-292 85-276 (391)
40 1kb0_A Quinohemoprotein alcoho 96.7 0.1 3.4E-06 50.6 18.1 67 175-242 123-208 (677)
41 3vgz_A Uncharacterized protein 96.6 0.28 9.7E-06 42.1 19.8 101 180-292 152-263 (353)
42 3vgz_A Uncharacterized protein 96.5 0.33 1.1E-05 41.7 21.4 171 55-267 152-333 (353)
43 1rwi_B Serine/threonine-protei 96.5 0.28 9.7E-06 40.5 18.4 178 55-292 77-265 (270)
44 3bws_A Protein LP49; two-domai 96.4 0.49 1.7E-05 42.1 19.7 185 55-292 133-335 (433)
45 1qhu_A Protein (hemopexin); be 96.3 0.42 1.4E-05 43.8 18.5 188 55-292 158-386 (460)
46 2ad6_A Methanol dehydrogenase 96.2 0.3 1E-05 46.2 18.1 66 176-242 111-194 (571)
47 1kv9_A Type II quinohemoprotei 96.1 0.074 2.5E-06 51.4 13.6 117 175-299 61-195 (668)
48 2ad6_A Methanol dehydrogenase 96.1 0.096 3.3E-06 49.6 14.1 118 175-299 57-193 (571)
49 1q7f_A NHL, brain tumor CG1071 96.1 0.5 1.7E-05 39.5 19.6 98 180-292 174-281 (286)
50 3no2_A Uncharacterized protein 96.1 0.53 1.8E-05 39.8 17.8 106 177-299 84-203 (276)
51 1yiq_A Quinohemoprotein alcoho 96.0 0.5 1.7E-05 45.8 18.8 65 176-241 117-200 (689)
52 2ast_B S-phase kinase-associat 96.0 0.003 1E-07 55.3 2.6 41 3-43 7-47 (336)
53 3bws_A Protein LP49; two-domai 95.9 0.65 2.2E-05 41.3 18.2 180 68-292 102-293 (433)
54 1p22_A F-BOX/WD-repeat protein 95.8 0.49 1.7E-05 42.4 17.1 131 148-292 233-366 (435)
55 2ovr_B FBW7, F-BOX/WD repeat p 95.8 0.87 3E-05 40.8 18.6 134 148-292 299-443 (445)
56 1q7f_A NHL, brain tumor CG1071 95.8 0.7 2.4E-05 38.6 20.0 100 180-292 131-239 (286)
57 3jrp_A Fusion protein of prote 95.7 0.86 2.9E-05 39.3 18.0 52 149-201 80-135 (379)
58 1kb0_A Quinohemoprotein alcoho 95.7 0.12 4.2E-06 49.9 13.2 117 175-299 72-207 (677)
59 1yiq_A Quinohemoprotein alcoho 95.7 0.13 4.3E-06 50.0 13.2 117 175-299 65-200 (689)
60 1flg_A Protein (quinoprotein e 95.7 0.58 2E-05 44.3 17.5 64 176-240 113-200 (582)
61 3g4e_A Regucalcin; six bladed 95.7 0.74 2.5E-05 39.0 16.7 139 149-303 74-239 (297)
62 1kv9_A Type II quinohemoprotei 95.6 0.72 2.5E-05 44.4 18.2 65 176-241 113-195 (668)
63 1w6s_A Methanol dehydrogenase 95.6 0.47 1.6E-05 45.2 16.4 120 179-299 116-295 (599)
64 1w6s_A Methanol dehydrogenase 95.3 0.21 7.1E-06 47.6 12.7 118 175-299 57-199 (599)
65 4aez_A CDC20, WD repeat-contai 95.2 1.5 5.2E-05 38.7 18.7 107 180-301 228-344 (401)
66 1flg_A Protein (quinoprotein e 95.2 0.31 1.1E-05 46.2 13.6 116 175-298 63-200 (582)
67 3v7d_B Cell division control p 95.2 1.6 5.6E-05 39.1 18.2 92 149-243 333-427 (464)
68 3u4y_A Uncharacterized protein 95.1 0.32 1.1E-05 41.6 12.6 132 149-299 109-258 (331)
69 1ri6_A Putative isomerase YBHE 95.1 0.84 2.9E-05 38.8 15.2 110 180-305 188-322 (343)
70 4ery_A WD repeat-containing pr 95.0 1.4 4.7E-05 37.2 19.4 101 180-292 160-269 (312)
71 2p1m_B Transport inhibitor res 94.8 0.0092 3.1E-07 56.5 1.9 37 2-38 3-40 (594)
72 1gxr_A ESG1, transducin-like e 94.8 1.4 4.7E-05 37.2 15.7 99 180-292 194-297 (337)
73 1k8k_C P40, ARP2/3 complex 41 94.5 1.1 3.8E-05 38.6 14.6 130 66-235 29-171 (372)
74 3u4y_A Uncharacterized protein 94.5 0.6 2E-05 39.8 12.7 115 148-267 20-147 (331)
75 2z2n_A Virginiamycin B lyase; 94.4 1.9 6.4E-05 35.8 21.2 97 180-292 193-296 (299)
76 1k8k_C P40, ARP2/3 complex 41 94.4 2.2 7.6E-05 36.6 17.6 108 180-303 153-286 (372)
77 3ow8_A WD repeat-containing pr 94.3 2.2 7.6E-05 36.5 18.6 100 180-292 175-280 (321)
78 4a2l_A BT_4663, two-component 94.2 3.9 0.00013 39.9 19.2 132 149-299 472-620 (795)
79 1jmx_B Amine dehydrogenase; ox 94.1 2.3 7.8E-05 36.1 15.6 51 55-109 10-62 (349)
80 3v9f_A Two-component system se 94.0 3.3 0.00011 40.4 18.3 133 149-299 470-617 (781)
81 3jro_A Fusion protein of prote 94.0 1 3.5E-05 43.9 14.5 96 66-201 30-133 (753)
82 2hz6_A Endoplasmic reticulum t 93.9 0.089 3E-06 46.7 6.2 125 149-298 20-156 (369)
83 3jrp_A Fusion protein of prote 93.8 1.3 4.5E-05 38.1 13.7 88 149-237 34-134 (379)
84 1gxr_A ESG1, transducin-like e 93.7 2.7 9.3E-05 35.3 16.2 130 148-292 119-256 (337)
85 3oyo_A Hemopexin fold protein 93.6 1.4 4.8E-05 36.2 12.5 55 180-236 127-197 (225)
86 1itv_A MMP9; adaptive molecula 93.6 2.3 7.8E-05 34.0 15.6 95 180-292 64-175 (195)
87 3mkq_A Coatomer beta'-subunit; 93.4 5.3 0.00018 38.6 18.6 101 180-292 152-260 (814)
88 1pjx_A Dfpase, DIISOPROPYLFLUO 93.4 3 0.0001 34.9 16.4 141 55-236 28-206 (314)
89 3hfq_A Uncharacterized protein 93.4 1.1 3.7E-05 38.6 12.3 55 180-234 151-215 (347)
90 3no2_A Uncharacterized protein 93.3 3.2 0.00011 34.9 18.5 89 176-266 131-230 (276)
91 1hxn_A Hemopexin, HPX; heme, b 93.3 2.9 9.8E-05 34.1 15.5 87 176-267 68-187 (219)
92 4ery_A WD repeat-containing pr 93.2 3.3 0.00011 34.7 16.0 62 180-241 118-184 (312)
93 3ow8_A WD repeat-containing pr 93.2 3.6 0.00012 35.1 16.8 88 180-268 217-310 (321)
94 1su3_A Interstitial collagenas 93.2 2.8 9.7E-05 38.2 14.9 96 180-292 318-433 (450)
95 1pex_A Collagenase-3, MMP-13; 93.0 3 0.0001 33.6 17.4 96 180-292 79-193 (207)
96 1pby_B Quinohemoprotein amine 93.0 1.9 6.5E-05 36.3 13.1 95 148-242 11-129 (337)
97 2dg1_A DRP35, lactonase; beta 92.9 2.6 8.9E-05 35.8 14.0 87 148-237 66-171 (333)
98 3fm0_A Protein CIAO1; WDR39,SG 92.9 1.3 4.4E-05 38.4 12.1 140 148-302 38-190 (345)
99 4aez_A CDC20, WD repeat-contai 92.9 4.5 0.00015 35.5 16.3 174 66-292 112-294 (401)
100 3dwl_C Actin-related protein 2 92.9 2.1 7.3E-05 37.0 13.5 105 57-202 24-133 (377)
101 4g56_B MGC81050 protein; prote 92.8 4.3 0.00015 35.2 15.5 129 149-292 205-344 (357)
102 2hqs_A Protein TOLB; TOLB, PAL 92.8 5 0.00017 35.7 16.5 133 148-299 247-393 (415)
103 1npe_A Nidogen, entactin; glyc 92.8 3.6 0.00012 33.9 24.4 96 180-292 133-239 (267)
104 1got_B GT-beta; complex (GTP-b 92.7 3.2 0.00011 35.7 14.3 89 180-269 237-333 (340)
105 1r5m_A SIR4-interacting protei 92.7 2.6 8.8E-05 36.8 14.0 100 180-292 258-362 (425)
106 3k26_A Polycomb protein EED; W 92.3 4.7 0.00016 34.3 15.6 23 180-202 172-194 (366)
107 1qhu_A Protein (hemopexin); be 92.3 5.9 0.0002 36.2 15.8 90 175-267 192-321 (460)
108 4a2l_A BT_4663, two-component 92.3 8.9 0.00031 37.3 22.3 186 55-300 98-298 (795)
109 3i2n_A WD repeat-containing pr 92.2 4.5 0.00015 34.3 14.6 60 180-239 128-201 (357)
110 1nir_A Nitrite reductase; hemo 92.2 6.4 0.00022 36.7 16.5 114 180-304 291-418 (543)
111 1jmx_B Amine dehydrogenase; ox 91.8 2 6.7E-05 36.6 11.8 56 148-204 21-78 (349)
112 4gga_A P55CDC, cell division c 91.8 6.5 0.00022 34.8 19.9 42 67-111 125-168 (420)
113 4gqb_B Methylosome protein 50; 91.7 6 0.00021 34.2 15.4 130 148-292 192-332 (344)
114 2aq5_A Coronin-1A; WD40 repeat 91.6 2.3 7.7E-05 37.5 12.2 88 149-237 155-254 (402)
115 1got_B GT-beta; complex (GTP-b 91.6 6 0.0002 33.9 18.6 132 148-292 164-302 (340)
116 3vl1_A 26S proteasome regulato 91.6 6.6 0.00023 34.3 15.6 23 180-202 192-214 (420)
117 1itv_A MMP9; adaptive molecula 91.5 4.4 0.00015 32.3 13.4 55 179-237 108-174 (195)
118 3ogk_B Coronatine-insensitive 91.4 0.06 2E-06 50.8 1.5 33 6-38 14-47 (592)
119 2z2n_A Virginiamycin B lyase; 91.4 5.3 0.00018 32.9 22.0 183 55-299 25-218 (299)
120 3zwl_B Eukaryotic translation 91.3 6.1 0.00021 33.5 14.9 61 219-292 186-250 (369)
121 3hxj_A Pyrrolo-quinoline quino 91.2 3.3 0.00011 34.9 12.6 63 178-241 105-173 (330)
122 3mkq_A Coatomer beta'-subunit; 91.2 5.3 0.00018 38.6 15.3 58 180-237 108-172 (814)
123 1vyh_C Platelet-activating fac 91.1 7.7 0.00026 34.3 16.4 55 148-203 214-268 (410)
124 1nir_A Nitrite reductase; hemo 91.1 3.5 0.00012 38.4 13.4 78 1-80 88-172 (543)
125 4gqb_B Methylosome protein 50; 91.0 4.5 0.00015 35.1 13.3 61 182-242 183-251 (344)
126 2pm9_A Protein WEB1, protein t 90.8 3.8 0.00013 35.7 12.8 98 182-292 228-338 (416)
127 4a11_B DNA excision repair pro 90.7 2.8 9.5E-05 36.4 11.8 100 180-292 256-366 (408)
128 2qc5_A Streptogramin B lactona 90.4 6.7 0.00023 32.3 21.1 177 55-290 72-259 (300)
129 3dwl_C Actin-related protein 2 90.3 4.4 0.00015 34.9 12.7 22 180-201 157-178 (377)
130 3oyo_A Hemopexin fold protein 90.2 6.7 0.00023 32.0 14.3 116 157-290 46-197 (225)
131 2qc5_A Streptogramin B lactona 90.1 7.1 0.00024 32.1 22.4 165 55-266 30-205 (300)
132 3e5z_A Putative gluconolactona 90.0 2.9 0.0001 34.9 11.0 84 149-237 51-162 (296)
133 4e54_B DNA damage-binding prot 90.0 4.5 0.00015 36.1 12.8 89 149-237 188-282 (435)
134 3ei3_B DNA damage-binding prot 90.0 8.8 0.0003 33.1 18.5 133 66-237 95-236 (383)
135 1n7d_A LDL receptor, low-densi 89.9 4.7 0.00016 39.0 13.4 86 180-266 507-601 (699)
136 4g56_B MGC81050 protein; prote 89.8 2.6 8.8E-05 36.7 10.6 98 182-292 195-302 (357)
137 3jro_A Fusion protein of prote 89.7 2.8 9.7E-05 40.7 11.9 89 148-237 31-132 (753)
138 3sfz_A APAF-1, apoptotic pepti 89.6 3.4 0.00012 42.4 12.9 130 148-292 1025-1159(1249)
139 2pbi_B Guanine nucleotide-bind 89.5 9.6 0.00033 32.9 14.2 89 180-269 251-347 (354)
140 3v65_B Low-density lipoprotein 89.5 11 0.00036 33.4 22.7 84 180-266 213-305 (386)
141 3ott_A Two-component system se 89.5 16 0.00054 35.3 19.7 141 55-245 73-230 (758)
142 3ott_A Two-component system se 89.4 14 0.00049 35.7 16.6 139 55-237 482-626 (758)
143 1ri6_A Putative isomerase YBHE 89.2 8.9 0.0003 32.1 16.3 56 181-236 141-208 (343)
144 3c7x_A Matrix metalloproteinas 89.2 7.3 0.00025 31.0 13.9 98 179-292 60-176 (196)
145 1pex_A Collagenase-3, MMP-13; 89.2 7.6 0.00026 31.2 17.6 57 180-238 127-193 (207)
146 3fvz_A Peptidyl-glycine alpha- 89.1 9.8 0.00034 32.4 26.3 107 180-292 154-278 (329)
147 3v65_B Low-density lipoprotein 88.9 12 0.0004 33.0 19.4 112 148-266 138-264 (386)
148 3c5m_A Oligogalacturonate lyas 88.8 11 0.00036 32.5 15.0 93 148-242 216-336 (396)
149 3odt_A Protein DOA1; ubiquitin 88.8 8.9 0.00031 31.6 16.6 102 176-292 109-215 (313)
150 3hxj_A Pyrrolo-quinoline quino 88.8 9.6 0.00033 31.9 15.0 60 179-241 186-251 (330)
151 2ynn_A Coatomer subunit beta'; 88.7 9.8 0.00033 31.9 17.3 100 180-292 152-260 (304)
152 2dg1_A DRP35, lactonase; beta 88.6 8.6 0.00029 32.5 13.1 105 180-292 55-172 (333)
153 2hqs_A Protein TOLB; TOLB, PAL 88.6 13 0.00043 33.0 16.7 135 148-300 203-351 (415)
154 3lp9_A LS-24; SEED albumin, pl 88.6 4.5 0.00015 33.1 10.5 56 180-237 129-201 (227)
155 1hxn_A Hemopexin, HPX; heme, b 88.6 4.5 0.00015 32.9 10.4 105 179-299 27-153 (219)
156 3v64_C Agrin; beta propeller, 88.4 12 0.00041 32.5 22.6 85 180-267 170-263 (349)
157 1ijq_A LDL receptor, low-densi 88.2 11 0.00039 32.0 22.7 86 180-266 131-225 (316)
158 4gga_A P55CDC, cell division c 88.0 13 0.00046 32.6 15.0 89 148-237 125-218 (420)
159 1sq9_A Antiviral protein SKI8; 87.8 13 0.00043 32.1 17.2 100 180-292 197-323 (397)
160 1gen_A Gelatinase A; hydrolase 87.3 11 0.00036 30.6 15.1 96 180-292 87-203 (218)
161 3hfq_A Uncharacterized protein 87.2 9.9 0.00034 32.3 12.7 89 148-236 18-116 (347)
162 3lp9_A LS-24; SEED albumin, pl 87.2 7.2 0.00024 31.9 10.9 117 157-292 48-202 (227)
163 3ba0_A Macrophage metalloelast 87.1 15 0.00052 32.3 15.8 97 180-292 236-351 (365)
164 1ijq_A LDL receptor, low-densi 87.0 13 0.00045 31.6 22.9 99 179-292 87-196 (316)
165 3lrv_A PRE-mRNA-splicing facto 87.0 13 0.00046 31.5 14.8 89 149-237 150-244 (343)
166 1su3_A Interstitial collagenas 86.5 14 0.00047 33.6 13.4 58 180-239 367-434 (450)
167 3odt_A Protein DOA1; ubiquitin 86.3 13 0.00044 30.6 17.6 110 176-302 191-305 (313)
168 2hz6_A Endoplasmic reticulum t 86.2 0.33 1.1E-05 43.0 2.4 106 176-298 5-118 (369)
169 1qks_A Cytochrome CD1 nitrite 86.2 10 0.00036 35.5 12.9 48 55-108 166-215 (567)
170 3vl1_A 26S proteasome regulato 86.1 16 0.00056 31.7 19.0 97 180-291 258-365 (420)
171 3fvz_A Peptidyl-glycine alpha- 86.0 15 0.00051 31.2 20.2 99 181-292 208-323 (329)
172 2p4o_A Hypothetical protein; p 85.9 15 0.0005 31.0 19.8 87 149-236 96-197 (306)
173 1n7d_A LDL receptor, low-densi 85.9 14 0.00049 35.6 14.0 99 179-292 463-572 (699)
174 1pgu_A Actin interacting prote 85.8 21 0.00073 32.7 19.7 129 148-291 467-614 (615)
175 3p5b_L Low density lipoprotein 85.8 18 0.00063 32.0 21.1 98 180-292 170-278 (400)
176 3sfz_A APAF-1, apoptotic pepti 85.7 28 0.00095 35.6 16.9 131 149-292 984-1117(1249)
177 1npe_A Nidogen, entactin; glyc 85.6 13 0.00046 30.3 18.3 66 180-245 178-246 (267)
178 3fm0_A Protein CIAO1; WDR39,SG 84.9 9.6 0.00033 32.6 11.4 22 180-201 116-137 (345)
179 3i2n_A WD repeat-containing pr 84.9 16 0.00056 30.6 15.2 59 179-237 178-243 (357)
180 1vyh_C Platelet-activating fac 84.9 20 0.00067 31.5 18.8 58 180-237 203-265 (410)
181 1sq9_A Antiviral protein SKI8; 84.9 18 0.00061 31.1 18.4 103 180-292 136-268 (397)
182 2ynn_A Coatomer subunit beta'; 84.8 16 0.00055 30.5 15.3 58 180-237 108-172 (304)
183 2ojh_A Uncharacterized protein 84.8 14 0.00048 29.8 15.1 59 149-207 63-126 (297)
184 1pjx_A Dfpase, DIISOPROPYLFLUO 84.8 16 0.00054 30.3 16.4 98 180-292 186-300 (314)
185 2vdu_B TRNA (guanine-N(7)-)-me 84.4 22 0.00074 31.6 16.2 60 181-240 210-274 (450)
186 4aow_A Guanine nucleotide-bind 84.4 17 0.00057 30.3 15.3 132 148-292 195-338 (340)
187 1r5m_A SIR4-interacting protei 84.4 19 0.00065 31.0 16.5 100 179-292 216-320 (425)
188 3scy_A Hypothetical bacterial 84.3 18 0.00063 30.8 15.3 50 151-201 80-130 (361)
189 1pby_B Quinohemoprotein amine 84.0 17 0.00057 30.3 12.3 47 190-237 114-163 (337)
190 3mmy_A MRNA export factor; mRN 83.5 19 0.00065 30.3 15.9 105 180-299 97-207 (368)
191 2pbi_B Guanine nucleotide-bind 83.4 21 0.00071 30.6 20.5 130 148-292 176-316 (354)
192 4ggc_A P55CDC, cell division c 83.2 18 0.00062 29.8 14.6 55 148-203 45-101 (318)
193 3v9f_A Two-component system se 83.1 35 0.0012 33.0 23.2 146 55-241 76-245 (781)
194 3g4e_A Regucalcin; six bladed 82.8 8.7 0.0003 32.2 9.9 65 180-244 24-91 (297)
195 3zwl_B Eukaryotic translation 82.6 14 0.00049 31.1 11.4 99 180-292 229-347 (369)
196 2fp8_A Strictosidine synthase; 82.6 21 0.00072 30.1 16.6 130 148-292 165-314 (322)
197 3bg1_A Protein SEC13 homolog; 82.6 14 0.00047 31.1 11.3 57 148-205 81-142 (316)
198 3frx_A Guanine nucleotide-bind 82.1 22 0.00074 29.9 12.4 63 180-242 118-190 (319)
199 3iz6_a 40S ribosomal protein R 82.1 24 0.00083 30.5 18.3 101 180-292 260-376 (380)
200 1erj_A Transcriptional repress 81.4 26 0.0009 30.4 15.2 24 180-203 218-241 (393)
201 3m0c_C LDL receptor, low-densi 81.3 43 0.0015 32.8 25.3 113 148-267 493-620 (791)
202 3bg1_A Protein SEC13 homolog; 81.3 11 0.00038 31.8 10.1 26 181-206 71-96 (316)
203 2pm9_A Protein WEB1, protein t 81.2 26 0.00088 30.2 14.7 58 180-237 274-337 (416)
204 3v64_C Agrin; beta propeller, 81.0 26 0.0009 30.2 20.8 175 55-292 44-235 (349)
205 2pm7_B Protein transport prote 80.9 23 0.00078 29.4 17.6 53 148-201 77-133 (297)
206 2aq5_A Coronin-1A; WD40 repeat 79.5 30 0.001 29.9 16.7 102 182-292 145-255 (402)
207 2ghs_A AGR_C_1268P; regucalcin 79.0 29 0.00098 29.4 12.7 64 180-243 60-126 (326)
208 2xyi_A Probable histone-bindin 78.6 34 0.0012 30.1 13.0 58 180-237 243-309 (430)
209 1erj_A Transcriptional repress 78.5 26 0.00088 30.5 11.9 58 180-237 176-238 (393)
210 3azo_A Aminopeptidase; POP fam 78.4 44 0.0015 31.2 16.2 105 180-299 252-375 (662)
211 1qks_A Cytochrome CD1 nitrite 78.0 38 0.0013 31.6 13.4 105 189-304 318-437 (567)
212 3e5z_A Putative gluconolactona 77.5 29 0.00098 28.6 13.0 56 179-237 227-286 (296)
213 3m0c_C LDL receptor, low-densi 77.5 56 0.0019 32.0 21.6 98 180-292 482-590 (791)
214 2hes_X YDR267CP; beta-propelle 77.5 31 0.0011 29.0 13.3 107 180-302 69-193 (330)
215 3f3f_A Nucleoporin SEH1; struc 76.8 30 0.001 28.5 17.2 32 259-303 317-348 (351)
216 3p5b_L Low density lipoprotein 76.5 40 0.0014 29.7 24.9 86 180-266 213-307 (400)
217 3hrp_A Uncharacterized protein 76.4 41 0.0014 29.8 15.9 27 180-206 333-360 (409)
218 3ei3_B DNA damage-binding prot 76.0 37 0.0012 29.0 13.9 88 149-237 97-194 (383)
219 4a11_B DNA excision repair pro 75.9 27 0.00093 29.8 11.2 58 180-237 111-175 (408)
220 3c7x_A Matrix metalloproteinas 75.6 22 0.00075 28.2 9.5 96 176-292 11-128 (196)
221 4ggc_A P55CDC, cell division c 75.2 33 0.0011 28.1 19.4 51 55-111 36-88 (318)
222 4e54_B DNA damage-binding prot 75.0 23 0.00077 31.3 10.6 58 180-237 176-240 (435)
223 2ojh_A Uncharacterized protein 74.9 31 0.0011 27.7 18.5 142 148-300 110-265 (297)
224 2ghs_A AGR_C_1268P; regucalcin 74.6 38 0.0013 28.6 14.0 81 149-234 72-167 (326)
225 1ck7_A Protein (gelatinase A); 74.3 33 0.0011 32.6 11.7 85 180-267 500-605 (631)
226 2pm7_B Protein transport prote 74.0 36 0.0012 28.1 16.3 109 181-302 170-295 (297)
227 2fp8_A Strictosidine synthase; 73.8 21 0.00071 30.1 9.7 57 180-236 239-312 (322)
228 3iuj_A Prolyl endopeptidase; h 73.6 61 0.0021 30.8 13.9 136 148-300 259-412 (693)
229 3sov_A LRP-6, low-density lipo 73.6 42 0.0014 28.6 22.3 84 180-266 133-225 (318)
230 3hrp_A Uncharacterized protein 72.9 50 0.0017 29.2 19.9 57 180-237 230-298 (409)
231 4a0p_A LRP6, LRP-6, low-densit 72.4 67 0.0023 30.4 23.3 84 180-266 134-224 (628)
232 3scy_A Hypothetical bacterial 72.4 44 0.0015 28.3 19.0 52 55-108 61-116 (361)
233 3ba0_A Macrophage metalloelast 71.9 51 0.0018 28.9 15.2 57 180-238 284-351 (365)
234 1gen_A Gelatinase A; hydrolase 71.4 39 0.0013 27.2 12.7 102 175-292 35-154 (218)
235 2hes_X YDR267CP; beta-propelle 70.6 47 0.0016 27.9 15.4 107 180-300 164-287 (330)
236 2vdu_B TRNA (guanine-N(7)-)-me 70.4 57 0.0019 28.8 22.3 111 180-297 251-397 (450)
237 2p4o_A Hypothetical protein; p 70.4 46 0.0016 27.7 21.4 88 178-267 176-277 (306)
238 3pe7_A Oligogalacturonate lyas 69.9 51 0.0017 28.0 15.5 33 55-87 47-80 (388)
239 3tc9_A Hypothetical hydrolase; 69.3 30 0.001 30.9 10.1 137 55-235 149-299 (430)
240 3mmy_A MRNA export factor; mRN 68.8 50 0.0017 27.5 16.4 85 149-237 109-199 (368)
241 1pgu_A Actin interacting prote 68.3 71 0.0024 29.1 13.1 99 181-292 456-573 (615)
242 3dr2_A Exported gluconolactona 68.1 16 0.00054 30.6 7.6 85 148-237 169-267 (305)
243 1yfq_A Cell cycle arrest prote 67.8 51 0.0018 27.3 14.6 51 149-200 80-131 (342)
244 4aow_A Guanine nucleotide-bind 65.5 57 0.0019 26.9 16.7 97 182-292 186-287 (340)
245 2mad_H Methylamine dehydrogena 64.7 71 0.0024 27.8 20.3 61 219-292 278-351 (373)
246 1yfq_A Cell cycle arrest prote 64.7 59 0.002 26.9 17.4 24 176-200 156-179 (342)
247 3lrv_A PRE-mRNA-splicing facto 64.4 63 0.0022 27.1 16.4 22 180-202 225-246 (343)
248 3pe7_A Oligogalacturonate lyas 64.2 67 0.0023 27.3 12.5 59 148-206 216-279 (388)
249 2be1_A Serine/threonine-protei 63.7 15 0.00051 32.0 6.5 58 179-237 9-76 (339)
250 3gre_A Serine/threonine-protei 62.9 76 0.0026 27.5 17.7 88 148-237 192-292 (437)
251 1yr2_A Prolyl oligopeptidase; 60.0 1.2E+02 0.0042 28.9 13.4 88 147-236 293-394 (741)
252 3o4h_A Acylamino-acid-releasin 59.9 1E+02 0.0036 28.1 12.3 56 148-205 175-232 (582)
253 3sjl_D Methylamine dehydrogena 59.8 81 0.0028 27.8 10.7 101 180-292 44-170 (386)
254 3dm0_A Maltose-binding peripla 56.1 1.3E+02 0.0046 28.2 17.1 97 182-292 532-633 (694)
255 3b7f_A Glycosyl hydrolase, BNR 55.7 1E+02 0.0035 26.7 18.6 194 55-304 22-274 (394)
256 3tc9_A Hypothetical hydrolase; 55.0 1.1E+02 0.0039 27.0 11.2 112 148-266 159-288 (430)
257 3sjl_D Methylamine dehydrogena 54.7 1.1E+02 0.0039 26.9 18.7 98 180-292 237-364 (386)
258 2ece_A 462AA long hypothetical 54.1 1.3E+02 0.0044 27.3 17.5 67 177-245 145-245 (462)
259 3iz6_a 40S ribosomal protein R 53.9 1E+02 0.0036 26.3 21.1 133 148-292 180-330 (380)
260 3sov_A LRP-6, low-density lipo 53.5 1E+02 0.0035 26.1 19.4 99 179-292 89-198 (318)
261 2xdw_A Prolyl endopeptidase; a 53.2 1.5E+02 0.0052 28.0 19.5 110 55-202 244-370 (710)
262 3c5m_A Oligogalacturonate lyas 53.0 1E+02 0.0036 26.0 15.8 144 147-300 167-336 (396)
263 3c75_H MADH, methylamine dehyd 53.0 1.1E+02 0.0038 27.3 10.5 100 181-292 85-210 (426)
264 3dm0_A Maltose-binding peripla 52.8 1.5E+02 0.0052 27.8 15.3 92 148-240 541-635 (694)
265 1k32_A Tricorn protease; prote 52.8 1.9E+02 0.0065 28.9 15.0 58 149-207 401-468 (1045)
266 4h5i_A Guanine nucleotide-exch 52.7 1.1E+02 0.0037 26.1 18.1 101 178-292 228-344 (365)
267 2xbg_A YCF48-like protein; pho 52.0 1.1E+02 0.0037 25.8 17.1 107 157-267 193-311 (327)
268 1fwx_A Nitrous oxide reductase 50.4 49 0.0017 31.2 7.9 152 148-304 254-442 (595)
269 2ymu_A WD-40 repeat protein; u 50.2 1.4E+02 0.0049 26.8 15.3 57 180-236 437-497 (577)
270 3vu4_A KMHSV2; beta-propeller 49.6 1.2E+02 0.0041 25.7 11.1 63 181-243 71-135 (355)
271 1ck7_A Protein (gelatinase A); 49.4 33 0.0011 32.6 6.6 102 175-292 448-567 (631)
272 3b7f_A Glycosyl hydrolase, BNR 49.2 1.3E+02 0.0044 26.0 19.1 85 181-266 190-297 (394)
273 3k26_A Polycomb protein EED; W 48.4 1.2E+02 0.0039 25.2 15.4 99 181-292 85-193 (366)
274 1nr0_A Actin interacting prote 46.4 1.8E+02 0.0062 26.8 15.8 25 180-204 250-274 (611)
275 2bkl_A Prolyl endopeptidase; m 45.1 2E+02 0.0069 27.0 14.8 58 148-206 295-357 (695)
276 2dae_A KIAA0733 protein; mitog 45.0 11 0.00039 24.3 1.8 17 5-21 21-37 (75)
277 2ece_A 462AA long hypothetical 44.6 1.8E+02 0.0062 26.3 15.0 22 55-77 95-116 (462)
278 3dr2_A Exported gluconolactona 44.2 1.3E+02 0.0045 24.7 12.4 116 181-299 57-184 (305)
279 2p9w_A MAL S 1 allergenic prot 43.8 1.6E+02 0.0054 25.4 12.2 99 171-270 184-306 (334)
280 4a0p_A LRP6, LRP-6, low-densit 42.6 2.2E+02 0.0076 26.8 23.7 161 55-266 6-184 (628)
281 3c75_H MADH, methylamine dehyd 42.2 1.9E+02 0.0064 25.8 15.6 66 219-302 330-409 (426)
282 3azo_A Aminopeptidase; POP fam 41.7 2.2E+02 0.0074 26.4 14.3 113 57-207 254-376 (662)
283 2oiz_A Aromatic amine dehydrog 37.8 1.4E+02 0.0047 25.5 8.6 65 219-302 265-343 (361)
284 2z3z_A Dipeptidyl aminopeptida 37.0 2.6E+02 0.009 26.0 19.0 101 180-292 322-436 (706)
285 3ju4_A Endo-N-acetylneuraminid 36.8 2.4E+02 0.0081 25.4 18.6 188 74-290 267-513 (670)
286 3s94_A LRP-6, low-density lipo 36.3 2.7E+02 0.0094 26.0 21.1 84 180-266 446-538 (619)
287 4hw6_A Hypothetical protein, I 35.9 2.3E+02 0.0079 25.1 12.1 97 181-292 153-260 (433)
288 2cn3_A Xyloglucanase, beta-1,4 35.8 1.9E+02 0.0063 27.8 9.9 83 158-241 232-343 (737)
289 3f3f_A Nucleoporin SEH1; struc 34.3 1.8E+02 0.0063 23.4 13.7 22 180-201 70-91 (351)
290 2bkl_A Prolyl endopeptidase; m 33.2 3.1E+02 0.011 25.7 18.9 91 190-292 251-352 (695)
291 3iuj_A Prolyl endopeptidase; h 32.5 3.2E+02 0.011 25.7 17.8 89 190-292 258-360 (693)
292 2xbg_A YCF48-like protein; pho 32.0 2.3E+02 0.0077 23.7 19.4 86 157-243 108-201 (327)
293 2kwv_A RAD30 homolog B, DNA po 31.7 30 0.001 20.2 2.0 21 3-23 19-39 (48)
294 3o4h_A Acylamino-acid-releasin 31.5 3E+02 0.01 25.0 15.0 107 176-297 116-231 (582)
295 2mad_H Methylamine dehydrogena 30.3 2.6E+02 0.009 24.0 21.1 51 55-109 32-85 (373)
296 3vu4_A KMHSV2; beta-propeller 29.8 2.5E+02 0.0085 23.6 16.9 62 219-292 206-272 (355)
297 1k32_A Tricorn protease; prote 27.7 4.6E+02 0.016 26.0 12.3 109 180-292 347-462 (1045)
298 2xyi_A Probable histone-bindin 27.6 3E+02 0.01 23.8 14.5 20 182-201 291-310 (430)
299 3qhy_B Beta-lactamase inhibito 26.5 56 0.0019 27.2 3.9 16 173-188 151-166 (282)
300 4hw6_A Hypothetical protein, I 25.7 3.5E+02 0.012 23.9 11.7 86 148-237 162-259 (433)
301 2be1_A Serine/threonine-protei 25.6 92 0.0031 26.9 5.1 64 180-243 55-140 (339)
302 1yr2_A Prolyl oligopeptidase; 25.4 4.4E+02 0.015 24.9 13.5 114 55-207 279-402 (741)
303 2ymu_A WD-40 repeat protein; u 25.3 3.6E+02 0.012 24.0 17.4 58 180-237 355-416 (577)
304 3frx_A Guanine nucleotide-bind 25.3 2.8E+02 0.0096 22.7 15.5 64 181-244 166-234 (319)
305 2xzm_R RACK1; ribosome, transl 23.7 3.1E+02 0.011 22.6 17.4 14 66-79 97-110 (343)
306 1mda_H Methylamine dehydrogena 23.6 1.9E+02 0.0066 25.1 6.9 73 219-308 275-359 (368)
307 2z3z_A Dipeptidyl aminopeptida 21.9 4.8E+02 0.016 24.2 18.4 138 147-299 234-397 (706)
308 3a0f_A Xyloglucanase; beta-pro 21.7 4.9E+02 0.017 24.9 10.1 125 158-299 578-723 (763)
309 2qe8_A Uncharacterized protein 21.5 3.5E+02 0.012 22.5 15.9 48 219-268 258-310 (343)
310 2xdw_A Prolyl endopeptidase; a 21.1 5.1E+02 0.018 24.2 18.8 91 190-292 258-369 (710)
311 2ecf_A Dipeptidyl peptidase IV 20.9 5.1E+02 0.017 24.1 14.8 185 53-292 117-370 (741)
312 2lyd_A Decapping protein 1; DC 20.9 84 0.0029 23.1 3.3 27 191-227 38-64 (134)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=280.95 Aligned_cols=236 Identities=22% Similarity=0.321 Sum_probs=204.3
Q ss_pred cCceEEEEEeCC---CCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccce
Q 021080 54 SENLLCVCAFDP---ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (317)
Q Consensus 54 ~~~~l~v~gg~~---~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (317)
.++.||++||.. .+++++||+.+++|..++++|.+ |.++++++++++|||+||..+. ...+++
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~-----------~~~~~~ 79 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR---RCRAGMVYMAGLVFAVGGFNGS-----------LRVRTV 79 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEESCBCSS-----------SBCCCE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc---cccceEEEECCEEEEEeCcCCC-----------ccccce
Confidence 367899999943 57899999999999999999985 9999999999999999997643 256889
Q ss_pred eEecccCC---------------------------CCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEE
Q 021080 131 WSYDPVTR---------------------------GFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKV 183 (317)
Q Consensus 131 ~~~d~~~~---------------------------G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~l 183 (317)
++||+.++ |........+++++||+.+++|+.+++||.+ |..+++++++++|
T Consensus 80 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~i 158 (302)
T 2xn4_A 80 DSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR-RSSVGVGVVGGLL 158 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEE
T ss_pred EEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc-ccCceEEEECCEE
Confidence 99999887 2222234568999999999999999999999 9999999999999
Q ss_pred EEEecC-------ceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEeC-------cEEEEecCCc--eEEEecc
Q 021080 184 HVLHKG-------LSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASA 244 (317)
Q Consensus 184 yv~gG~-------~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g~-------~~~~~yd~~~--W~~v~~~ 244 (317)
|++||. .+.+++||+.+++|+.+++++. .+.+++++++||++|| +.++.||+++ |+.++.+
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 238 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM 238 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC
Confidence 999991 5789999999999999987765 5677889999999997 4799999887 9999998
Q ss_pred ccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecc-cCCCCCCceeeeeEee
Q 021080 245 SEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS-PMTRCRGTILGCTQLR 316 (317)
Q Consensus 245 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~-~~p~~~~~~~~~~~~~ 316 (317)
| ..|.+++++.++++||++||.+.. ...+++++||++++ +|+.++ +||.+|.. |++++++
T Consensus 239 ~--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~--~W~~~~~~~~~~r~~-~~~~~~~ 299 (302)
T 2xn4_A 239 N--MCRRNAGVCAVNGLLYVVGGDDGS-------CNLASVEYYNPTTD--KWTVVSSCMSTGRSY-AGVTVID 299 (302)
T ss_dssp S--SCCBSCEEEEETTEEEEECCBCSS-------SBCCCEEEEETTTT--EEEECSSCCSSCCBS-CEEEEEE
T ss_pred C--CccccCeEEEECCEEEEECCcCCC-------cccccEEEEcCCCC--eEEECCcccCccccc-ceEEEec
Confidence 8 678889999999999999998654 35789999999999 999997 89999998 7888774
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.2e-38 Score=282.92 Aligned_cols=239 Identities=19% Similarity=0.325 Sum_probs=205.4
Q ss_pred cCceEEEEEeC---CCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccce
Q 021080 54 SENLLCVCAFD---PENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (317)
Q Consensus 54 ~~~~l~v~gg~---~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (317)
.++.||++||. ..+++++||+.+++|..++++|.+ |.++++++++++|||+||..... .+....+++
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~~~~~ 92 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP---RSGLAGCVVGGLLYAVGGRNNSP-------DGNTDSSAL 92 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCEEEET-------TEEEECCCE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc---cccceEEEECCEEEEECCCcCCC-------CCCeecceE
Confidence 48899999993 468999999999999999999886 99999999999999999973100 012356889
Q ss_pred eEecccCC---------------------------CCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEE
Q 021080 131 WSYDPVTR---------------------------GFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKV 183 (317)
Q Consensus 131 ~~~d~~~~---------------------------G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~l 183 (317)
++||+.++ |........+++++||+.+++|+.++++|.+ |..+++++++++|
T Consensus 93 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i 171 (308)
T 1zgk_A 93 DCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR-RIGVGVAVLNRLL 171 (308)
T ss_dssp EEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEE
T ss_pred EEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc-ccceEEEEECCEE
Confidence 99999887 3322234578999999999999999999999 9999999999999
Q ss_pred EEEec-----CceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEeC-------cEEEEecCCc--eEEEecccc
Q 021080 184 HVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASASE 246 (317)
Q Consensus 184 yv~gG-----~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g~-------~~~~~yd~~~--W~~v~~~~~ 246 (317)
|++|| ..+.+++||+.+++|+.+++++. .+.+++++++||++|| +.++.||+++ |+++..+|
T Consensus 172 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p- 250 (308)
T 1zgk_A 172 YAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK- 250 (308)
T ss_dssp EEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS-
T ss_pred EEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC-
Confidence 99999 25789999999999999987765 5677889999999997 5799999877 99999888
Q ss_pred ccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccCCCCCCceeeeeEe
Q 021080 247 FRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 247 ~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
.+|..++++.++++||++||.+.. ...+++++||++++ +|+.+++||.+|.. ++||+|
T Consensus 251 -~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~--~W~~~~~~p~~r~~-~~~~~l 308 (308)
T 1zgk_A 251 -HRRSALGITVHQGRIYVLGGYDGH-------TFLDSVECYDPDTD--TWSEVTRMTSGRSG-VGVAVT 308 (308)
T ss_dssp -SCCBSCEEEEETTEEEEECCBCSS-------CBCCEEEEEETTTT--EEEEEEECSSCCBS-CEEEEC
T ss_pred -CCccceEEEEECCEEEEEcCcCCC-------cccceEEEEcCCCC--EEeecCCCCCCccc-ceeEeC
Confidence 688899999999999999998764 36789999999999 99999999999998 677764
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=278.82 Aligned_cols=233 Identities=15% Similarity=0.202 Sum_probs=205.6
Q ss_pred CceEEEEEeCC-CCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDP-ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
.+.||++||.. .++++.||+.+++|..++++|.+ |.+|++++++++|||+||... ...+++++|
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~------------~~~~~~~~~ 75 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK---RRDAACVFWDNVVYILGGSQL------------FPIKRMDCY 75 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCC---CBSCEEEEETTEEEEECCBSS------------SBCCEEEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcc---cceeEEEEECCEEEEEeCCCC------------CCcceEEEE
Confidence 47899998854 78999999999999999999985 999999999999999999762 267899999
Q ss_pred cccCC----------------------------CCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEE
Q 021080 134 DPVTR----------------------------GFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHV 185 (317)
Q Consensus 134 d~~~~----------------------------G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv 185 (317)
|+.++ |.+......+++++||+.+++|+.+++||.+ |..|++++++++||+
T Consensus 76 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv 154 (306)
T 3ii7_A 76 NVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMVEANGLIYV 154 (306)
T ss_dssp ETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEE
T ss_pred eCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEEEECCEEEE
Confidence 99887 3333455678999999999999999999999 999999999999999
Q ss_pred Eec-----C----ceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEeC-------cEEEEecCCc--eEEEecc
Q 021080 186 LHK-----G----LSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASA 244 (317)
Q Consensus 186 ~gG-----~----~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g~-------~~~~~yd~~~--W~~v~~~ 244 (317)
+|| . .+.+++||+.+++|+.+++++. .+.+++++++||++|| +.++.||+++ |+.++.+
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 234 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM 234 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC
Confidence 999 2 6889999999999999987765 6777889999999998 4689999887 9999998
Q ss_pred ccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccCCCCCCceeeeeEe
Q 021080 245 SEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 245 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
| ..|..++++.++++||++||.+... ..+++++||++++ +|+.+++||.+|.. ++++++
T Consensus 235 p--~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~--~W~~~~~~~~~r~~-~~~~~~ 293 (306)
T 3ii7_A 235 P--WKGVTVKCAAVGSIVYVLAGFQGVG-------RLGHILEYNTETD--KWVANSKVRAFPVT-SCLICV 293 (306)
T ss_dssp S--CCBSCCEEEEETTEEEEEECBCSSS-------BCCEEEEEETTTT--EEEEEEEEECCSCT-TCEEEE
T ss_pred C--CCccceeEEEECCEEEEEeCcCCCe-------eeeeEEEEcCCCC--eEEeCCCcccccce-eEEEEE
Confidence 8 6889999999999999999987653 6779999999999 99999999999998 566655
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=274.17 Aligned_cols=236 Identities=22% Similarity=0.298 Sum_probs=204.2
Q ss_pred cCceEEEEEe-CC----CCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCccccc
Q 021080 54 SENLLCVCAF-DP----ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (317)
Q Consensus 54 ~~~~l~v~gg-~~----~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 128 (317)
.++.||++|| .. .+++++||+.+++|..++++|.+ |..+++++++++||++||..+. ...+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~l~v~GG~~~~-----------~~~~ 78 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK---RRYVASVSLHDRIYVIGGYDGR-----------SRLS 78 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCBCSS-----------CBCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh---hccccEEEECCEEEEEcCCCCC-----------ccCc
Confidence 4778999999 32 67999999999999999998875 9999999999999999997632 2577
Q ss_pred ceeEecccCC------------------------------CCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEE
Q 021080 129 EVWSYDPVTR------------------------------GFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV 178 (317)
Q Consensus 129 ~~~~~d~~~~------------------------------G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~ 178 (317)
++++||+.++ |........+++++||+.+++|+.++++|.+ |..|++++
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~ 157 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGAGLVV 157 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSCEEEE
T ss_pred eEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccceEEE
Confidence 8999988664 3222334578999999999999999999999 99999999
Q ss_pred ECCEEEEEec-----CceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEeC-------cEEEEecCCc--eEEE
Q 021080 179 IGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVV 241 (317)
Q Consensus 179 ~~g~lyv~gG-----~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g~-------~~~~~yd~~~--W~~v 241 (317)
++++||++|| ..+.+++||+.+++|+.+++++. .+.+++++++||++|| +.++.||+++ |+++
T Consensus 158 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 9999999999 35789999999999999987765 5677889999999998 4799999886 9999
Q ss_pred eccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccCCCCCCceeeeeEee
Q 021080 242 ASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQLR 316 (317)
Q Consensus 242 ~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~~ 316 (317)
+.+| .+|..++++.++++||++||.+... ..+++++||++++ +|+.+++||.+|.. |+|++|.
T Consensus 238 ~~~p--~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~--~W~~~~~~~~~r~~-~~~~~~~ 300 (301)
T 2vpj_A 238 TSMT--TPRCYVGATVLRGRLYAIAGYDGNS-------LLSSIECYDPIID--SWEVVTSMGTQRCD-AGVCVLR 300 (301)
T ss_dssp CCCS--SCCBSCEEEEETTEEEEECCBCSSS-------BEEEEEEEETTTT--EEEEEEEEEEEEES-CEEEEEE
T ss_pred CCCC--CcccceeEEEECCEEEEEcCcCCCc-------ccccEEEEcCCCC--eEEEcCCCCccccc-ceEEEeC
Confidence 9988 6788999999999999999987552 5679999999999 99999999999998 6888764
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-36 Score=269.67 Aligned_cols=249 Identities=15% Similarity=0.205 Sum_probs=199.3
Q ss_pred hhhhhcCHhHHHhhcChhhHHHHHhcC--CcCceEEEEEeCC----------CCceEEEeCCCCCEeecCCCCccccccC
Q 021080 26 PKLELVSRSWRAAIRSPELFKARQEVG--SSENLLCVCAFDP----------ENLWQLYDPLRDLWITLPVLPSKIRHLA 93 (317)
Q Consensus 26 ~~~~~v~k~w~~l~~s~~~~~~~~~~~--~~~~~l~v~gg~~----------~~~~~~yd~~~~~W~~~~~~p~~~~~r~ 93 (317)
..+....++|... ..+ .+.+|..++ ..++.||++||.. .++++.||+.+++|.+++++|.+ |.
T Consensus 27 ~~yd~~~~~W~~~-~~~-~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~ 101 (318)
T 2woz_A 27 VAYDPMENECYLT-ALA-EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---RC 101 (318)
T ss_dssp EEEETTTTEEEEE-EEC-TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---BC
T ss_pred EEECCCCCceecc-cCC-ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---cc
Confidence 3455567788762 211 122333333 4588999999931 22489999999999999999986 99
Q ss_pred CeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCc
Q 021080 94 HFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSA 173 (317)
Q Consensus 94 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~ 173 (317)
.|++++++++|||+||.... .....+++++||+.+++|+.++++|.+ |..
T Consensus 102 ~~~~~~~~~~iyv~GG~~~~-----------------------------~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~ 151 (318)
T 2woz_A 102 LFGLGEVDDKIYVVAGKDLQ-----------------------------TEASLDSVLCYDPVAAKWSEVKNLPIK-VYG 151 (318)
T ss_dssp SCEEEEETTEEEEEEEEBTT-----------------------------TCCEEEEEEEEETTTTEEEEECCCSSC-EES
T ss_pred ccceEEECCEEEEEcCccCC-----------------------------CCcccceEEEEeCCCCCEeECCCCCCc-ccc
Confidence 99999999999999997531 123468899999999999999999999 999
Q ss_pred eEEEEECCEEEEEec------CceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEeC-------cEEEEecCCc
Q 021080 174 CTGVVIGGKVHVLHK------GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV 237 (317)
Q Consensus 174 ~~~~~~~g~lyv~gG------~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g~-------~~~~~yd~~~ 237 (317)
|++++++++||++|| ..+.+++||+.+++|+.+++++. .+.+++++++||++|| +.++.||+++
T Consensus 152 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 152 HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCC
Confidence 999999999999999 25689999999999999987765 5677889999999997 4788999877
Q ss_pred --eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCc--eecccCcceeEeecCCCCCceeecccCCCCCCceeeee
Q 021080 238 --RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWN--WDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCT 313 (317)
Q Consensus 238 --W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~--~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~ 313 (317)
|++++.+| .+|..++++.++++||++||........ ......+++++||++++ +|+.+ +|.+|.. |+++
T Consensus 232 ~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~--~~~~r~~-~~~~ 304 (318)
T 2woz_A 232 NKWEVMTEFP--QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK--EWAGM--LKEIRYA-SGAS 304 (318)
T ss_dssp CCEEECCCCS--SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT--EEEEE--ESCCGGG-TTCE
T ss_pred CeEEECCCCC--CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC--Eehhh--ccccccc-ccce
Confidence 99999998 6789999999999999999987532110 01135689999999999 99999 7888887 6777
Q ss_pred Eee
Q 021080 314 QLR 316 (317)
Q Consensus 314 ~~~ 316 (317)
+++
T Consensus 305 ~~~ 307 (318)
T 2woz_A 305 CLA 307 (318)
T ss_dssp EEE
T ss_pred eeC
Confidence 653
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=268.60 Aligned_cols=249 Identities=15% Similarity=0.167 Sum_probs=198.3
Q ss_pred hhhhhcCHhHHHhhcChhhHHHHHhcC--CcCceEEEEEeC-----C-----CCceEEEeCCCCCEeecCCCCccccccC
Q 021080 26 PKLELVSRSWRAAIRSPELFKARQEVG--SSENLLCVCAFD-----P-----ENLWQLYDPLRDLWITLPVLPSKIRHLA 93 (317)
Q Consensus 26 ~~~~~v~k~w~~l~~s~~~~~~~~~~~--~~~~~l~v~gg~-----~-----~~~~~~yd~~~~~W~~~~~~p~~~~~r~ 93 (317)
..+....++|.. ..-| .+.+|..++ ..++.||++||. . .++++.||+.+++|..++++|.+ |.
T Consensus 16 ~~yd~~~~~W~~-~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~ 90 (315)
T 4asc_A 16 VAYDPAANECYC-ASLS-SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP---RC 90 (315)
T ss_dssp EEEETTTTEEEE-EECC-CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC---EE
T ss_pred EEECCCCCeEec-CCCC-CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc---hh
Confidence 345556777864 2222 122344443 358899999993 1 24589999999999999999975 99
Q ss_pred CeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCc
Q 021080 94 HFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSA 173 (317)
Q Consensus 94 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~ 173 (317)
+|++++++++|||+||..... .....+++++||+.+++|+.+++||.+ |..
T Consensus 91 ~~~~~~~~~~lyv~GG~~~~~----------------------------~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~ 141 (315)
T 4asc_A 91 LFGLGEALNSIYVVGGREIKD----------------------------GERCLDSVMCYDRLSFKWGESDPLPYV-VYG 141 (315)
T ss_dssp SCEEEEETTEEEEECCEESST----------------------------TCCBCCCEEEEETTTTEEEECCCCSSC-CBS
T ss_pred ceeEEEECCEEEEEeCCcCCC----------------------------CCcccceEEEECCCCCcEeECCCCCCc-ccc
Confidence 999999999999999975210 134568999999999999999999999 999
Q ss_pred eEEEEECCEEEEEecC------ceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEeC-------cEEEEecCCc
Q 021080 174 CTGVVIGGKVHVLHKG------LSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMSH-------GLIIKQHRDV 237 (317)
Q Consensus 174 ~~~~~~~g~lyv~gG~------~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g~-------~~~~~yd~~~ 237 (317)
|++++++++||++||. .+.+++||+.+++|+.+++++. .+.+++++++||++|| +.++.||+++
T Consensus 142 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 142 HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 9999999999999992 5789999999999999987765 5677889999999997 4799999887
Q ss_pred --eEEEeccccccccccEEEEEECCeEEEEeCcccCC--CCceecccCcceeEeecCCCCCceeecccCCCCCCceeeee
Q 021080 238 --RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPD--RWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCT 313 (317)
Q Consensus 238 --W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~--~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~ 313 (317)
|+.++.+| .+|.+++++.++++||++||.+... .........+++++||++++ +|+.+ +|.+|.. ++++
T Consensus 222 ~~W~~~~~~p--~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~--~~~~r~~-~~~~ 294 (315)
T 4asc_A 222 NKWAPFEAFP--QERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK--KWEGV--LREIAYA-AGAT 294 (315)
T ss_dssp TEEEEECCCS--SCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT--EEEEE--ESCSSCC-SSCE
T ss_pred CeEEECCCCC--CcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC--hhhhh--ccCCcCc-cceE
Confidence 99999988 6899999999999999999986531 11111135679999999999 99999 4566666 4555
Q ss_pred Ee
Q 021080 314 QL 315 (317)
Q Consensus 314 ~~ 315 (317)
++
T Consensus 295 ~~ 296 (315)
T 4asc_A 295 FL 296 (315)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=7.2e-35 Score=263.68 Aligned_cols=229 Identities=14% Similarity=0.166 Sum_probs=183.9
Q ss_pred cCceEEEEEeCCCCceEEEeCC--CCCEeecCCCC-ccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccce
Q 021080 54 SENLLCVCAFDPENLWQLYDPL--RDLWITLPVLP-SKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (317)
Q Consensus 54 ~~~~l~v~gg~~~~~~~~yd~~--~~~W~~~~~~p-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (317)
.++.|||+||...+++++||+. +++|..++++| .+ |..|++++++++|||+||.....+
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~~lyv~GG~~~~~~--------------- 79 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDGNLYVFGGIGKNSE--------------- 79 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCC---CBSCEEEEETTEEEEECCEEECTT---------------
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCc---CccceEEEECCEEEEEcCCCCCCC---------------
Confidence 3889999999777899999998 49999999999 54 999999999999999999721000
Q ss_pred eEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCC-ccCCCceEEEEECCEEEEEecC--------------------
Q 021080 131 WSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLH-RTHNSACTGVVIGGKVHVLHKG-------------------- 189 (317)
Q Consensus 131 ~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~~r~~~~~~~~~g~lyv~gG~-------------------- 189 (317)
......+++++||+.+++|+.+++|+ .+ |..|++++++++||++||.
T Consensus 80 -----------~~~~~~~~v~~yd~~~~~W~~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 147 (357)
T 2uvk_A 80 -----------GLTQVFNDVHKYNPKTNSWVKLMSHAPMG-MAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDST 147 (357)
T ss_dssp -----------SCEEECCCEEEEETTTTEEEECSCCCSSC-CSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHH
T ss_pred -----------ccceeeccEEEEeCCCCcEEECCCCCCcc-cccceEEEECCEEEEEeCcCCCcCcccccchhhcCCccc
Confidence 01345789999999999999999998 88 9999999999999999992
Q ss_pred -------------------ceeEEEEeCCCCcEEeccCCcc----CCcEEEEcCeEEEEeC--------cEEEEecC--C
Q 021080 190 -------------------LSTVQVLDHMGLGWTVEDYGWL----QGPMAIVHDSVYLMSH--------GLIIKQHR--D 236 (317)
Q Consensus 190 -------------------~~~v~~yd~~~~~W~~~~~~~~----~~~~~~~~~~ly~~g~--------~~~~~yd~--~ 236 (317)
.+.+++||+.+++|+.+++++. .+.+++++++||++|| ..++.||. +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~ 227 (357)
T 2uvk_A 148 AIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGN 227 (357)
T ss_dssp HHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC--
T ss_pred chhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCC
Confidence 2689999999999999987664 3677888999999998 35777864 5
Q ss_pred c--eEEEeccccccccccEEEEEECCeEEEEeCcccCCCC----------ceecccCcceeEeecCCCCCceeecccCCC
Q 021080 237 V--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRW----------NWDIKPMSDVDVLTVGAERPTWRQVSPMTR 304 (317)
Q Consensus 237 ~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~----------~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~ 304 (317)
+ |+++..++.+..|.+++++.++++||++||....+.. .......+++++||++++ +|+.+++||.
T Consensus 228 ~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~ 305 (357)
T 2uvk_A 228 NLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG--KWDKSGELSQ 305 (357)
T ss_dssp -CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSS
T ss_pred CCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC--ceeeCCCCCC
Confidence 4 9999999865667788899999999999997643200 000023468999999999 9999999999
Q ss_pred CCCceeeeeEe
Q 021080 305 CRGTILGCTQL 315 (317)
Q Consensus 305 ~~~~~~~~~~~ 315 (317)
+|.. ++++++
T Consensus 306 ~r~~-~~~~~~ 315 (357)
T 2uvk_A 306 GRAY-GVSLPW 315 (357)
T ss_dssp CCBS-SEEEEE
T ss_pred Cccc-ceeEEe
Confidence 9998 677655
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=258.92 Aligned_cols=218 Identities=18% Similarity=0.206 Sum_probs=185.3
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEec
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d 134 (317)
++.|+++|| +++++||+.+++|.. +++|.+ .+|.++++++++++|||+||.....+
T Consensus 4 ~~~l~~~GG---~~~~~yd~~~~~W~~-~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~------------------- 59 (315)
T 4asc_A 4 QDLIFMISE---EGAVAYDPAANECYC-ASLSSQ-VPKNHVSLVTKENQVFVAGGLFYNED------------------- 59 (315)
T ss_dssp EEEEEEEET---TEEEEEETTTTEEEE-EECCCC-SCSSEEEEECTTCCEEEEEEEEECSS-------------------
T ss_pred ceEEEEEcC---CceEEECCCCCeEec-CCCCCC-CCccceEEEEECCEEEEEcCcccCCC-------------------
Confidence 568899998 789999999999987 566542 24999999999999999999632100
Q ss_pred ccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEec--------CceeEEEEeCCCCcEEec
Q 021080 135 PVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK--------GLSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 135 ~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG--------~~~~v~~yd~~~~~W~~~ 206 (317)
.......+++++||+.+++|+.+++||.+ |..|++++++++||++|| ..+.+++||+.+++|+.+
T Consensus 60 ------~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~ 132 (315)
T 4asc_A 60 ------NKEDPMSAYFLQFDHLDSEWLGMPPLPSP-RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES 132 (315)
T ss_dssp ------CSSSCEEEEEEEEETTTTEEEECCCBSSC-EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC
T ss_pred ------CCccccccceEEecCCCCeEEECCCCCcc-hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC
Confidence 00122345699999999999999999999 999999999999999999 246799999999999999
Q ss_pred cCCcc---CCcEEEEcCeEEEEeC--------cEEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCC
Q 021080 207 DYGWL---QGPMAIVHDSVYLMSH--------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDR 273 (317)
Q Consensus 207 ~~~~~---~~~~~~~~~~ly~~g~--------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~ 273 (317)
++++. .+.+++++++||++|| +.++.||+++ |+.++.+| .+|..++++.++++||++||....+
T Consensus 133 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~- 209 (315)
T 4asc_A 133 DPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ--TARSLFGATVHDGRIIVAAGVTDTG- 209 (315)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEEETTEEEEEEEECSSS-
T ss_pred CCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC--CchhceEEEEECCEEEEEeccCCCC-
Confidence 87765 6778889999999998 4799999887 99999988 6899999999999999999987653
Q ss_pred CceecccCcceeEeecCCCCCceeecccCCCCCCceeeeeEe
Q 021080 274 WNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 274 ~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
..+++++||++++ +|+.++++|.+|.. ++++++
T Consensus 210 ------~~~~~~~yd~~~~--~W~~~~~~p~~r~~-~~~~~~ 242 (315)
T 4asc_A 210 ------LTSSAEVYSITDN--KWAPFEAFPQERSS-LSLVSL 242 (315)
T ss_dssp ------EEEEEEEEETTTT--EEEEECCCSSCCBS-CEEEEE
T ss_pred ------ccceEEEEECCCC--eEEECCCCCCcccc-eeEEEE
Confidence 5679999999999 99999999999998 677665
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=7e-34 Score=253.32 Aligned_cols=219 Identities=16% Similarity=0.210 Sum_probs=182.6
Q ss_pred cCceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 54 SENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 54 ~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
.++.||++|| .++++|||.+++|... +++.+ .+|.++++++.+++|||+||.....+ +
T Consensus 14 ~~~~i~~~GG---~~~~~yd~~~~~W~~~-~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~~-------~---------- 71 (318)
T 2woz_A 14 VKDLILLVND---TAAVAYDPMENECYLT-ALAEQ-IPRNHSSIVTQQNQVYVVGGLYVDEE-------N---------- 71 (318)
T ss_dssp EEEEEEEECS---SEEEEEETTTTEEEEE-EECTT-SCSSEEEEECSSSCEEEEESSCC---------------------
T ss_pred ecchhhhccc---cceEEECCCCCceecc-cCCcc-CCccceEEEEECCEEEEECCcccCcc-------c----------
Confidence 3678999998 4689999999999984 44432 24899999999999999999632110 0
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecC-------ceeEEEEeCCCCcEEec
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKG-------LSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~-------~~~v~~yd~~~~~W~~~ 206 (317)
......+++++||+.+++|+.+++||.+ |..|++++++++||++||. .+.+++||+.+++|+.+
T Consensus 72 --------~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~ 142 (318)
T 2woz_A 72 --------KDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV 142 (318)
T ss_dssp -----------CCCBEEEEEETTTTEEEECSCBSSC-BCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE
T ss_pred --------cCCCccccEEEEeCCCCcEEECCCCCcc-ccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC
Confidence 0011235689999999999999999999 9999999999999999992 36899999999999999
Q ss_pred cCCcc---CCcEEEEcCeEEEEeC--------cEEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCC
Q 021080 207 DYGWL---QGPMAIVHDSVYLMSH--------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDR 273 (317)
Q Consensus 207 ~~~~~---~~~~~~~~~~ly~~g~--------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~ 273 (317)
++++. .+.+++++++||++|| +.++.||+++ |++++.+| .+|..++++.++++||++||....
T Consensus 143 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-- 218 (318)
T 2woz_A 143 KNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK--TPRSMFGVAIHKGKIVIAGGVTED-- 218 (318)
T ss_dssp CCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS--SCCBSCEEEEETTEEEEEEEEETT--
T ss_pred CCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC--CCcccceEEEECCEEEEEcCcCCC--
Confidence 87765 6778889999999998 3699999887 99999988 688999999999999999998765
Q ss_pred CceecccCcceeEeecCCCCCceeecccCCCCCCceeeeeEe
Q 021080 274 WNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 274 ~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
...+++++||++++ +|+.++++|.+|.. |+++++
T Consensus 219 -----~~~~~~~~yd~~~~--~W~~~~~~p~~r~~-~~~~~~ 252 (318)
T 2woz_A 219 -----GLSASVEAFDLKTN--KWEVMTEFPQERSS-ISLVSL 252 (318)
T ss_dssp -----EEEEEEEEEETTTC--CEEECCCCSSCCBS-CEEEEE
T ss_pred -----CccceEEEEECCCC--eEEECCCCCCcccc-eEEEEE
Confidence 25679999999999 99999999999998 676665
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=2e-32 Score=247.57 Aligned_cols=251 Identities=16% Similarity=0.119 Sum_probs=182.5
Q ss_pred CHhHHHhhcChhhH-HHHHhcCC--cCceEEEEEeC-C--------CCceEEEeCCCCCEeecCCCCccccccCCeeEEE
Q 021080 32 SRSWRAAIRSPELF-KARQEVGS--SENLLCVCAFD-P--------ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS 99 (317)
Q Consensus 32 ~k~w~~l~~s~~~~-~~~~~~~~--~~~~l~v~gg~-~--------~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~ 99 (317)
.++|+.+.. ++ .+|..++. .++.|||+||. . .+++++||+.+++|..+++++ |.+|..+++++
T Consensus 42 ~~~W~~~~~---~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~ 116 (357)
T 2uvk_A 42 DKKWTALAA---FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFV 116 (357)
T ss_dssp SCCEEECCC---CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEE
T ss_pred CCCeeECCC---CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEE
Confidence 478988743 44 34444433 48899999996 1 578999999999999999988 23599999999
Q ss_pred eCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCC-----------CCCCCcCCCceeEEeeCCCCceeeCCCCCc
Q 021080 100 TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR-----------GFTSCRKSISQAEMYDPEKDVWVPIPDLHR 168 (317)
Q Consensus 100 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----------G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~ 168 (317)
++++|||+||.+.... + ....++..+++..+ +........+++++||+.+++|+.+++||.
T Consensus 117 ~~~~iyv~GG~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 188 (357)
T 2uvk_A 117 HNGKAYVTGGVNQNIF------N--GYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPW 188 (357)
T ss_dssp ETTEEEEEECCCHHHH------H--HHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSS
T ss_pred ECCEEEEEeCcCCCcC------c--ccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCC
Confidence 9999999999753100 0 00000111111000 000001245899999999999999999998
Q ss_pred cCCCceEEEEECCEEEEEec------CceeEEEEeC--CCCcEEeccCCcc-----CCcEEEEcCeEEEEeCc-------
Q 021080 169 THNSACTGVVIGGKVHVLHK------GLSTVQVLDH--MGLGWTVEDYGWL-----QGPMAIVHDSVYLMSHG------- 228 (317)
Q Consensus 169 ~~r~~~~~~~~~g~lyv~gG------~~~~v~~yd~--~~~~W~~~~~~~~-----~~~~~~~~~~ly~~g~~------- 228 (317)
+.+..+++++++++||++|| ..+.+++||+ .+++|+.++.++. .+.+++++++||++||.
T Consensus 189 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 268 (357)
T 2uvk_A 189 YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRE 268 (357)
T ss_dssp CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHH
T ss_pred CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcc
Confidence 72444899999999999999 2567888976 9999999987743 34578899999999982
Q ss_pred -----------------EEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeec
Q 021080 229 -----------------LIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTV 289 (317)
Q Consensus 229 -----------------~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~ 289 (317)
.++.||+++ |++++.+| .+|..++++.++++|||+||.+..+ ...+++++|++
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~~------~~~~~v~~l~~ 340 (357)
T 2uvk_A 269 NYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS--QGRAYGVSLPWNNSLLIIGGETAGG------KAVTDSVLITV 340 (357)
T ss_dssp HHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS--SCCBSSEEEEETTEEEEEEEECGGG------CEEEEEEEEEC
T ss_pred cccccceeccccccceeeEEEEecCCCceeeCCCCC--CCcccceeEEeCCEEEEEeeeCCCC------CEeeeEEEEEE
Confidence 578899877 99999998 6788899999999999999987664 35689999999
Q ss_pred CCCCCceeecccCCCC
Q 021080 290 GAERPTWRQVSPMTRC 305 (317)
Q Consensus 290 ~~~~~~W~~~~~~p~~ 305 (317)
+++ +|.+..+.|..
T Consensus 341 ~~~--~~~~~~~~~~~ 354 (357)
T 2uvk_A 341 KDN--KVTVQNLEHHH 354 (357)
T ss_dssp -CC--SCEEEC-----
T ss_pred cCc--EeEeeeccccc
Confidence 999 99998877653
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.98 E-value=4.8e-31 Score=233.98 Aligned_cols=200 Identities=18% Similarity=0.247 Sum_probs=168.0
Q ss_pred ccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCC---------------------------CCC--
Q 021080 91 HLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR---------------------------GFT-- 141 (317)
Q Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------------------G~~-- 141 (317)
+|..++++.++++||++||... ...+++++||+.++ |..
T Consensus 14 ~~~~~~~~~~~~~i~v~GG~~~------------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~ 81 (308)
T 1zgk_A 14 VPRGSHAPKVGRLIYTAGGYFR------------QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNN 81 (308)
T ss_dssp -------CCCCCCEEEECCBSS------------SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEE
T ss_pred eeCCccccCCCCEEEEEeCcCC------------CCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcC
Confidence 4888999999999999999732 25788999999877 332
Q ss_pred --CCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEec-----CceeEEEEeCCCCcEEeccCCcc---
Q 021080 142 --SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL--- 211 (317)
Q Consensus 142 --~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG-----~~~~v~~yd~~~~~W~~~~~~~~--- 211 (317)
......+++++||+.+++|+.+++||.+ |..+++++++++||++|| ..+.+++||+.+++|+.+++++.
T Consensus 82 ~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 160 (308)
T 1zgk_A 82 SPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI 160 (308)
T ss_dssp ETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc
Confidence 3345678999999999999999999999 999999999999999999 35789999999999999987765
Q ss_pred CCcEEEEcCeEEEEeC-------cEEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCc
Q 021080 212 QGPMAIVHDSVYLMSH-------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMS 282 (317)
Q Consensus 212 ~~~~~~~~~~ly~~g~-------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 282 (317)
.+.+++++++||++|| +.++.||+++ |+.++.+| .+|..++++.++++||++||.... ...+
T Consensus 161 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-------~~~~ 231 (308)
T 1zgk_A 161 GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN--TIRSGAGVCVLHNCIYAAGGYDGQ-------DQLN 231 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEEETTEEEEECCBCSS-------SBCC
T ss_pred ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC--CccccceEEEECCEEEEEeCCCCC-------Cccc
Confidence 6677888999999998 4699999877 99999988 688999999999999999998755 2578
Q ss_pred ceeEeecCCCCCceeecccCCCCCCceeeeeEe
Q 021080 283 DVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 283 ~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
++++||++++ +|+.++++|.+|.. ++++++
T Consensus 232 ~v~~yd~~~~--~W~~~~~~p~~r~~-~~~~~~ 261 (308)
T 1zgk_A 232 SVERYDVETE--TWTFVAPMKHRRSA-LGITVH 261 (308)
T ss_dssp CEEEEETTTT--EEEECCCCSSCCBS-CEEEEE
T ss_pred eEEEEeCCCC--cEEECCCCCCCccc-eEEEEE
Confidence 9999999999 99999999999998 677665
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=224.27 Aligned_cols=195 Identities=23% Similarity=0.345 Sum_probs=164.0
Q ss_pred eEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCC---------------------------CCCCCcCCCc
Q 021080 96 GVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR---------------------------GFTSCRKSIS 148 (317)
Q Consensus 96 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------------------G~~~~~~~~~ 148 (317)
..+.+++.||++||.+.. ..+++++||+.++ |........+
T Consensus 10 ~~~~~~~~i~v~GG~~~~------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 77 (302)
T 2xn4_A 10 TPMNLPKLMVVVGGQAPK------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVR 77 (302)
T ss_dssp -----CEEEEEECCBSSS------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCC
T ss_pred cccCCCCEEEEECCCCCC------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCcccc
Confidence 345678899999997542 4678999998877 3333345678
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEec-----CceeEEEEeCCCCcEEeccCCcc---CCcEEEEcC
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHD 220 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG-----~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~ 220 (317)
++++||+.+++|+.+++||.+ |..|++++++++||++|| ..+.+++||+.+++|+.+++++. .+.++++++
T Consensus 78 ~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 156 (302)
T 2xn4_A 78 TVDSYDPVKDQWTSVANMRDR-RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGG 156 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred ceEEECCCCCceeeCCCCCcc-ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECC
Confidence 999999999999999999999 999999999999999999 34789999999999999987765 567788999
Q ss_pred eEEEEeC---------cEEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeec
Q 021080 221 SVYLMSH---------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTV 289 (317)
Q Consensus 221 ~ly~~g~---------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~ 289 (317)
+||++|| +.++.||+++ |+.++.+| .+|.+++++.++++||++||.+.. ...+++++||+
T Consensus 157 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~~~-------~~~~~~~~yd~ 227 (302)
T 2xn4_A 157 LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS--TRRSGAGVGVLNNLLYAVGGHDGP-------LVRKSVEVYDP 227 (302)
T ss_dssp EEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS--SCCBSCEEEEETTEEEEECCBSSS-------SBCCCEEEEET
T ss_pred EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc--cccccccEEEECCEEEEECCCCCC-------cccceEEEEeC
Confidence 9999997 3588999887 99999988 688999999999999999998754 35679999999
Q ss_pred CCCCCceeecccCCCCCCceeeeeEe
Q 021080 290 GAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 290 ~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
+++ +|+.++++|.+|.. ++++++
T Consensus 228 ~~~--~W~~~~~~~~~r~~-~~~~~~ 250 (302)
T 2xn4_A 228 TTN--AWRQVADMNMCRRN-AGVCAV 250 (302)
T ss_dssp TTT--EEEEECCCSSCCBS-CEEEEE
T ss_pred CCC--CEeeCCCCCCcccc-CeEEEE
Confidence 999 99999999999987 566654
No 13
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.97 E-value=5.5e-29 Score=220.30 Aligned_cols=187 Identities=17% Similarity=0.254 Sum_probs=163.5
Q ss_pred CCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCC---------------------------CCCCCcCCCceeEEe
Q 021080 101 AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR---------------------------GFTSCRKSISQAEMY 153 (317)
Q Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------------------G~~~~~~~~~~~~~y 153 (317)
.+.||++||... .+++++||+.++ |... ....+++++|
T Consensus 11 ~~~l~~~GG~~~--------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~ 75 (306)
T 3ii7_A 11 HDYRIALFGGSQ--------------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCY 75 (306)
T ss_dssp CCEEEEEECCSS--------------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEE
T ss_pred cceEEEEeCCCC--------------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEE
Confidence 488999999752 578999999887 3332 5567899999
Q ss_pred eCCCCceeeCCCCCccCCCceEEEEECCEEEEEec------CceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEE
Q 021080 154 DPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK------GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYL 224 (317)
Q Consensus 154 d~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG------~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~ 224 (317)
|+.+++|+.+++||.+ |..|++++++++||++|| ..+.+++||+.+++|+.+++++. .+.+++++++||+
T Consensus 76 d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 154 (306)
T 3ii7_A 76 NVVKDSWYSKLGPPTP-RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYV 154 (306)
T ss_dssp ETTTTEEEEEECCSSC-CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred eCCCCeEEECCCCCcc-ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEE
Confidence 9999999999999999 999999999999999999 34789999999999999987765 6777889999999
Q ss_pred EeC-----------cEEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCC
Q 021080 225 MSH-----------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 291 (317)
Q Consensus 225 ~g~-----------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~ 291 (317)
+|| +.++.||+++ |+.++.+| .+|.+++++.++++||++||.+.. ...+++++||+++
T Consensus 155 ~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 155 CGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI--EARKNHGLVFVKDKIFAVGGQNGL-------GGLDNVEYYDIKL 225 (306)
T ss_dssp ECCEESCTTTCEECCCEEEEETTTTEEEEECCCS--SCCBSCEEEEETTEEEEECCEETT-------EEBCCEEEEETTT
T ss_pred ECCCCCCCCcccccceEEEeCCCCCeEEECCCcc--chhhcceEEEECCEEEEEeCCCCC-------CCCceEEEeeCCC
Confidence 997 3588999887 99999888 689999999999999999998765 2577999999999
Q ss_pred CCCceeecccCCCCCCceeeeeEe
Q 021080 292 ERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 292 ~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
+ +|+.++++|.+|.. ++++++
T Consensus 226 ~--~W~~~~~~p~~r~~-~~~~~~ 246 (306)
T 3ii7_A 226 N--EWKMVSPMPWKGVT-VKCAAV 246 (306)
T ss_dssp T--EEEECCCCSCCBSC-CEEEEE
T ss_pred C--cEEECCCCCCCccc-eeEEEE
Confidence 9 99999999999998 677665
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=6.4e-29 Score=219.29 Aligned_cols=194 Identities=22% Similarity=0.332 Sum_probs=165.5
Q ss_pred EeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCC---------------------------CCCCCcCCCceeE
Q 021080 99 STAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTR---------------------------GFTSCRKSISQAE 151 (317)
Q Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------------------G~~~~~~~~~~~~ 151 (317)
.++++||++||..... ...+++++||+.++ |........++++
T Consensus 12 ~~~~~i~~~GG~~~~~----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 81 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQ----------SPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVE 81 (301)
T ss_dssp -CCEEEEEECCEETTT----------EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEE
T ss_pred cCCCEEEEEeCccCCC----------cceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEE
Confidence 4688999999943211 26788999999877 3333345678999
Q ss_pred EeeCCCCc---eeeCCCCCccCCCceEEEEECCEEEEEec-----CceeEEEEeCCCCcEEeccCCcc---CCcEEEEcC
Q 021080 152 MYDPEKDV---WVPIPDLHRTHNSACTGVVIGGKVHVLHK-----GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHD 220 (317)
Q Consensus 152 ~yd~~t~~---W~~~~~~p~~~r~~~~~~~~~g~lyv~gG-----~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~ 220 (317)
+||+.+++ |+.++++|.+ |..+++++++++||++|| ..+.+++||+.+++|+.+++++. .+.++++++
T Consensus 82 ~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 160 (301)
T 2vpj_A 82 CLDYTADEDGVWYSVAPMNVR-RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASG 160 (301)
T ss_dssp EEETTCCTTCCCEEECCCSSC-CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETT
T ss_pred EEECCCCCCCeeEECCCCCCC-ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECC
Confidence 99999999 9999999999 999999999999999999 35789999999999999987665 667788899
Q ss_pred eEEEEeC-------cEEEEecCCc--eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCC
Q 021080 221 SVYLMSH-------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 291 (317)
Q Consensus 221 ~ly~~g~-------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~ 291 (317)
+||++|| +.++.||+++ |+.++.+| .+|..++++.++++||++||.+... ..+++++||+++
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~ 231 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA--TKRSGAGVALLNDHIYVVGGFDGTA-------HLSSVEAYNIRT 231 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS--SCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTT
T ss_pred EEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC--cccccceEEEECCEEEEEeCCCCCc-------ccceEEEEeCCC
Confidence 9999997 5799999877 99999888 6888999999999999999987653 478999999999
Q ss_pred CCCceeecccCCCCCCceeeeeEe
Q 021080 292 ERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 292 ~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
+ +|+.++++|.+|.. ++++++
T Consensus 232 ~--~W~~~~~~p~~r~~-~~~~~~ 252 (301)
T 2vpj_A 232 D--SWTTVTSMTTPRCY-VGATVL 252 (301)
T ss_dssp T--EEEEECCCSSCCBS-CEEEEE
T ss_pred C--cEEECCCCCCcccc-eeEEEE
Confidence 9 99999999999988 676665
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=1.6e-28 Score=240.29 Aligned_cols=205 Identities=12% Similarity=0.065 Sum_probs=170.2
Q ss_pred cCceEEEEEeC---CCCceEEEeCCCCCEeecC-C-----CCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCC
Q 021080 54 SENLLCVCAFD---PENLWQLYDPLRDLWITLP-V-----LPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQD 122 (317)
Q Consensus 54 ~~~~l~v~gg~---~~~~~~~yd~~~~~W~~~~-~-----~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 122 (317)
.++.||++||. ..+++++||+.+++|..++ + +|. +|.+|+++++ +++|||+||....
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~---~R~~hs~~~~~~~~~lyv~GG~~~~--------- 463 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPV---ARMCHTFTTISRNNQLLLIGGRKAP--------- 463 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCC---CCBSCEEEEETTTTEEEEECCBSST---------
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCc---cccceEEEEEccCCEEEEEcCCCCC---------
Confidence 58899999994 4678999999999999987 6 454 4999999999 9999999998642
Q ss_pred CcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE-CCEEEEEecC--ceeEEEEeCC
Q 021080 123 GSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GGKVHVLHKG--LSTVQVLDHM 199 (317)
Q Consensus 123 ~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~-~g~lyv~gG~--~~~v~~yd~~ 199 (317)
....+++++||+.+++|+.+++||.+ |..|+++++ +++||++||. ...+++||+.
T Consensus 464 ---------------------~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~ 521 (695)
T 2zwa_A 464 ---------------------HQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVT 521 (695)
T ss_dssp ---------------------TCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETT
T ss_pred ---------------------CCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECC
Confidence 22468899999999999999999999 999999996 9999999992 2289999999
Q ss_pred CCcEEeccC---Ccc---CCcEEEEc---CeEEEEeC---------cEEEEecCC--c------eEEEeccccccccccE
Q 021080 200 GLGWTVEDY---GWL---QGPMAIVH---DSVYLMSH---------GLIIKQHRD--V------RKVVASASEFRRRIGF 253 (317)
Q Consensus 200 ~~~W~~~~~---~~~---~~~~~~~~---~~ly~~g~---------~~~~~yd~~--~------W~~v~~~~~~~~r~~~ 253 (317)
+++|+.++. ++. .+.+++++ ++||++|| +.++.||++ + |+.+..+|. .+|.++
T Consensus 522 t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~-~~R~~~ 600 (695)
T 2zwa_A 522 EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL-FQRYGS 600 (695)
T ss_dssp TTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG-GCCBSC
T ss_pred CCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC-CCcccc
Confidence 999999986 332 45656667 89999997 368889864 3 788887642 689999
Q ss_pred EEEEEC-CeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 254 AMIGMG-DDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 254 ~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
+++.++ ++||++||....+.. ...+++++||++++ +|+.+
T Consensus 601 ~~~~~~~~~iyv~GG~~~~~~~----~~~~~v~~yd~~t~--~W~~~ 641 (695)
T 2zwa_A 601 QIKYITPRKLLIVGGTSPSGLF----DRTNSIISLDPLSE--TLTSI 641 (695)
T ss_dssp EEEEEETTEEEEECCBCSSCCC----CTTTSEEEEETTTT--EEEEC
T ss_pred eEEEeCCCEEEEECCccCCCCC----CCCCeEEEEECCCC--eEEEe
Confidence 999999 999999998655310 25789999999999 99965
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=1.3e-27 Score=232.99 Aligned_cols=241 Identities=16% Similarity=0.216 Sum_probs=184.7
Q ss_pred hhhhcCHhHHHhhcChhhHHHHHhcCCc--CceEEEEEeCC----------CCceEEEeCCCCCEeecCCCCccccccCC
Q 021080 27 KLELVSRSWRAAIRSPELFKARQEVGSS--ENLLCVCAFDP----------ENLWQLYDPLRDLWITLPVLPSKIRHLAH 94 (317)
Q Consensus 27 ~~~~v~k~w~~l~~s~~~~~~~~~~~~~--~~~l~v~gg~~----------~~~~~~yd~~~~~W~~~~~~p~~~~~r~~ 94 (317)
.+.....+|..+...|. .....+.. ++.||++||.. ...+++||+.+++|..++.+|.+ |..
T Consensus 170 ~~dp~~~~W~~~~~~P~---~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~---~~~ 243 (656)
T 1k3i_A 170 APQPGLGRWGPTIDLPI---VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK---HDM 243 (656)
T ss_dssp CCCTTSCEEEEEEECSS---CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS---CCC
T ss_pred cCCCCCCeeeeeccCCC---CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC---CCC
Confidence 44556678887755554 11112222 78999999843 13689999999999999888765 554
Q ss_pred ee--EE-EeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCC
Q 021080 95 FG--VV-STAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHN 171 (317)
Q Consensus 95 ~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r 171 (317)
++ ++ ..+++||++||... .++++||+.+++|+++++|+.+ |
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~-----------------------------------~~v~~yd~~t~~W~~~~~~~~~-R 287 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDA-----------------------------------KKTSLYDSSSDSWIPGPDMQVA-R 287 (656)
T ss_dssp SSCEEEECTTSCEEEECSSST-----------------------------------TCEEEEEGGGTEEEECCCCSSC-C
T ss_pred ccccccCCCCCCEEEeCCCCC-----------------------------------CceEEecCcCCceeECCCCCcc-c
Confidence 43 33 46899999999742 3689999999999999999999 9
Q ss_pred CceEEEEE-CCEEEEEec------CceeEEEEeCCCCcEEecc-----CCcc----------------------------
Q 021080 172 SACTGVVI-GGKVHVLHK------GLSTVQVLDHMGLGWTVED-----YGWL---------------------------- 211 (317)
Q Consensus 172 ~~~~~~~~-~g~lyv~gG------~~~~v~~yd~~~~~W~~~~-----~~~~---------------------------- 211 (317)
..|+++++ +|+||++|| ..+.+++||+.+++|+.++ +++.
T Consensus 288 ~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~ 367 (656)
T 1k3i_A 288 GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGP 367 (656)
T ss_dssp SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCS
T ss_pred cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecC
Confidence 99999998 999999999 2478999999999999863 1111
Q ss_pred -------------------------------CCcEEE----EcCeEEEEeCc-------------EEEEecCCc--eEEE
Q 021080 212 -------------------------------QGPMAI----VHDSVYLMSHG-------------LIIKQHRDV--RKVV 241 (317)
Q Consensus 212 -------------------------------~~~~~~----~~~~ly~~g~~-------------~~~~yd~~~--W~~v 241 (317)
....++ .+++||++||. .++.||+++ |.++
T Consensus 368 ~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 447 (656)
T 1k3i_A 368 STAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVF 447 (656)
T ss_dssp SSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEE
T ss_pred ccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEE
Confidence 012333 38999999982 688999876 9998
Q ss_pred e--ccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccCCCCCCceeeeeEe
Q 021080 242 A--SASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMTRCRGTILGCTQL 315 (317)
Q Consensus 242 ~--~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~~~~~~~~~~~~ 315 (317)
. .|| .+|..++++.+ +|+||++||.+...... ......++++||++++ +|+.++++|.+|.. |++|++
T Consensus 448 ~~~~mp--~~R~~~~~~~l~~g~i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~--~W~~~~~~~~~R~~-hs~a~l 518 (656)
T 1k3i_A 448 ASNGLY--FARTFHTSVVLPDGSTFITGGQRRGIPFE-DSTPVFTPEIYVPEQD--TFYKQNPNSIVRVY-HSISLL 518 (656)
T ss_dssp CTTCCS--SCCBSCEEEECTTSCEEEECCBSBCCTTC-CCSBCCCCEEEEGGGT--EEEECCCCSSCCCT-TEEEEE
T ss_pred ccCCCC--CCcccCCeEECCCCCEEEECCcccCcCcC-CCCcccceEEEcCCCC--ceeecCCCCCcccc-ccHhhc
Confidence 7 777 68888888887 99999999976431100 1146789999999999 99999999999999 676665
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=6.9e-25 Score=214.54 Aligned_cols=182 Identities=11% Similarity=0.028 Sum_probs=150.8
Q ss_pred ccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCC-C----
Q 021080 91 HLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIP-D---- 165 (317)
Q Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~-~---- 165 (317)
.|.++++ +++++|||+||... ...+++++||+.+++|+.++ +
T Consensus 388 rr~g~~~-~~~~~iyv~GG~~~--------------------------------~~~~~v~~yd~~~~~W~~~~~~~p~~ 434 (695)
T 2zwa_A 388 RKFGDVD-VAGNDVFYMGGSNP--------------------------------YRVNEILQLSIHYDKIDMKNIEVSSS 434 (695)
T ss_dssp CBSCEEE-ECSSCEEEECCBSS--------------------------------SBCCCEEEEEECSSCEEEEECCCCCS
T ss_pred CceeEEE-EECCEEEEECCCCC--------------------------------CCcCcEEEEECCCCeEEEeccCCCCC
Confidence 3666554 48999999999742 23578999999999999987 5
Q ss_pred -CCccCCCceEEEEE--CCEEEEEec------CceeEEEEeCCCCcEEeccCCcc---CCcEEEE-cCeEEEEeCc----
Q 021080 166 -LHRTHNSACTGVVI--GGKVHVLHK------GLSTVQVLDHMGLGWTVEDYGWL---QGPMAIV-HDSVYLMSHG---- 228 (317)
Q Consensus 166 -~p~~~r~~~~~~~~--~g~lyv~gG------~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~-~~~ly~~g~~---- 228 (317)
||.+ |..|+++++ +|+||++|| ..+++++||+.+++|+.+++++. .+.++++ +++||++||.
T Consensus 435 ~~p~~-R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~ 513 (695)
T 2zwa_A 435 EVPVA-RMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP 513 (695)
T ss_dssp CCCCC-CBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC
T ss_pred CCCcc-ccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC
Confidence 7889 999999999 999999999 24789999999999999987765 5667775 9999999983
Q ss_pred EEEEecCCc--eEEEec---cccccccccEEEEEEC---CeEEEEeCcccCCCCceecccCcceeEeecCCCCCc-----
Q 021080 229 LIIKQHRDV--RKVVAS---ASEFRRRIGFAMIGMG---DDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPT----- 295 (317)
Q Consensus 229 ~~~~yd~~~--W~~v~~---~~~~~~r~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~----- 295 (317)
.++.||+++ |+.+.. +| .+|.++++++++ ++||++||....+. ...+++++||++++ +
T Consensus 514 ~v~~yd~~t~~W~~~~~~g~~p--~~r~~~~a~v~~~~~~~iyv~GG~~~~~~-----~~~~~v~~yd~~~~--~w~~~~ 584 (695)
T 2zwa_A 514 AMLLYNVTEEIFKDVTPKDEFF--QNSLVSAGLEFDPVSKQGIILGGGFMDQT-----TVSDKAIIFKYDAE--NATEPI 584 (695)
T ss_dssp SEEEEETTTTEEEECCCSSGGG--GSCCBSCEEEEETTTTEEEEECCBCTTSS-----CBCCEEEEEEECTT--CSSCCE
T ss_pred CEEEEECCCCceEEccCCCCCC--CcccceeEEEEeCCCCEEEEECCcCCCCC-----eeeCcEEEEEccCC--ccccce
Confidence 799999887 999986 66 688888877776 89999999865431 35789999999999 8
Q ss_pred -eeecccC-CCCCCceeeeeEee
Q 021080 296 -WRQVSPM-TRCRGTILGCTQLR 316 (317)
Q Consensus 296 -W~~~~~~-p~~~~~~~~~~~~~ 316 (317)
|+.+.++ +.+|.. |++++++
T Consensus 585 ~W~~~~~~p~~~R~~-~~~~~~~ 606 (695)
T 2zwa_A 585 TVIKKLQHPLFQRYG-SQIKYIT 606 (695)
T ss_dssp EEEEEEECGGGCCBS-CEEEEEE
T ss_pred EEEEcCCCCCCCccc-ceEEEeC
Confidence 8999886 588887 6777654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.90 E-value=6.4e-23 Score=199.80 Aligned_cols=211 Identities=10% Similarity=0.038 Sum_probs=154.0
Q ss_pred CceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCc
Q 021080 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCR 144 (317)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~ 144 (317)
..+..||+.+++|..+.++|. ..+.++++ +++||++||...... | ...
T Consensus 166 ~~~~~~dp~~~~W~~~~~~P~-----~~~~~av~~~~g~l~v~GG~~~~~~-----------------------~--~~~ 215 (656)
T 1k3i_A 166 SSYTAPQPGLGRWGPTIDLPI-----VPAAAAIEPTSGRVLMWSSYRNDAF-----------------------G--GSP 215 (656)
T ss_dssp SCCCCCCTTSCEEEEEEECSS-----CCSEEEEETTTTEEEEEEECCCTTT-----------------------C--SCC
T ss_pred cccccCCCCCCeeeeeccCCC-----CceeEEEEecCCEEEEEeccccccc-----------------------c--cCC
Confidence 357889999999999988874 33444444 999999999753210 0 001
Q ss_pred CCCceeEEeeCCCCceeeCCCCCccCCCce--EEE-EECCEEEEEec-CceeEEEEeCCCCcEEeccCCcc---CCcEEE
Q 021080 145 KSISQAEMYDPEKDVWVPIPDLHRTHNSAC--TGV-VIGGKVHVLHK-GLSTVQVLDHMGLGWTVEDYGWL---QGPMAI 217 (317)
Q Consensus 145 ~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~--~~~-~~~g~lyv~gG-~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~ 217 (317)
.....+++||+.+++|+.+++||.+ |..+ +++ ..+|+||++|| ....+++||+.+++|+.+++++. .+.+++
T Consensus 216 ~~~~~~~~yd~~t~~w~~~~~~~~~-~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 216 GGITLTSSWDPSTGIVSDRTVTVTK-HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp CSEEEEEEECTTTCCBCCCEEEECS-CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred CCeEEEEEEeCCCCcEEeCcccCCC-CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence 2345789999999999999999887 5443 233 46899999999 45589999999999999987765 466777
Q ss_pred E-cCeEEEEeC--------cEEEEecCCc--eEEEe-----cccccc---------------------------------
Q 021080 218 V-HDSVYLMSH--------GLIIKQHRDV--RKVVA-----SASEFR--------------------------------- 248 (317)
Q Consensus 218 ~-~~~ly~~g~--------~~~~~yd~~~--W~~v~-----~~~~~~--------------------------------- 248 (317)
+ +|+||++|| +.++.||+++ |+.++ +++...
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y 374 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY 374 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred ecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeee
Confidence 7 999999998 4689999876 99973 232110
Q ss_pred ----------------------ccccEEEE---EECCeEEEEeCcccCCCCceecccCc---ceeEeecCCCCCceeecc
Q 021080 249 ----------------------RRIGFAMI---GMGDDIYVIGGVIGPDRWNWDIKPMS---DVDVLTVGAERPTWRQVS 300 (317)
Q Consensus 249 ----------------------~r~~~~~~---~~~~~lyv~GG~~~~~~~~~~~~~~~---~v~~yd~~~~~~~W~~~~ 300 (317)
.+..++++ ..+++||++||....... ...+ .+++||++++ +|..+.
T Consensus 375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~----~~~~~~~~v~~yd~~~~--~W~~~~ 448 (656)
T 1k3i_A 375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS----DATTNAHIITLGEPGTS--PNTVFA 448 (656)
T ss_dssp ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS----BCCCCEEEEECCSTTSC--CEEEEC
T ss_pred ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC----CcCCcceEEEcCCCCCC--CeeEEc
Confidence 01122333 258999999997543211 1233 7899999999 999986
Q ss_pred --cCCCCCCceeeeeEe
Q 021080 301 --PMTRCRGTILGCTQL 315 (317)
Q Consensus 301 --~~p~~~~~~~~~~~~ 315 (317)
+||.+|.. ++++++
T Consensus 449 ~~~mp~~R~~-~~~~~l 464 (656)
T 1k3i_A 449 SNGLYFARTF-HTSVVL 464 (656)
T ss_dssp TTCCSSCCBS-CEEEEC
T ss_pred cCCCCCCccc-CCeEEC
Confidence 89999998 565554
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.75 E-value=3.7e-06 Score=77.09 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=41.0
Q ss_pred CcCCCCcHHHHHHHhccCCCCchhhhhhcCHhHHHhhcChhhHHHH
Q 021080 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPELFKAR 48 (317)
Q Consensus 3 ~~~~~Lp~d~~~~~l~r~p~~~~~~~~~v~k~w~~l~~s~~~~~~~ 48 (317)
+++..||+|++..||+.|+..++.+++.|||+|+.++.++.+-+..
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~ 62 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREK 62 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhh
Confidence 5688999999999999999999999999999999998887665543
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.72 E-value=4.7e-06 Score=76.62 Aligned_cols=42 Identities=29% Similarity=0.395 Sum_probs=37.9
Q ss_pred CcCCCCcHHHHHHHhccCCCCchhhhhhcCHhHHHhhcC-hhh
Q 021080 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRS-PEL 44 (317)
Q Consensus 3 ~~~~~Lp~d~~~~~l~r~p~~~~~~~~~v~k~w~~l~~s-~~~ 44 (317)
+++..||+|++.+||+.|+..++.+++.|||+|+.++.+ +.+
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~ 55 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSL 55 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 356789999999999999999999999999999999987 543
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.69 E-value=9.1e-07 Score=81.04 Aligned_cols=44 Identities=25% Similarity=0.339 Sum_probs=38.5
Q ss_pred CcCCCCcHH----HHHHHhccCCCCchhhhhhcCHhHHHhhcChhhHH
Q 021080 3 ELIEGLPDA----VALRCLARVPFFLHPKLELVSRSWRAAIRSPELFK 46 (317)
Q Consensus 3 ~~~~~Lp~d----~~~~~l~r~p~~~~~~~~~v~k~w~~l~~s~~~~~ 46 (317)
+++..||+| ++..||+.|+..++.+++.|||+|+.++.++.+-+
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 456779999 99999999999999999999999999987766543
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.54 E-value=6.6e-08 Score=61.41 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=38.5
Q ss_pred CcCCCCcHHHHHHHhccCCCCchhhhhhcCHhHHHhhcChhhH
Q 021080 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPELF 45 (317)
Q Consensus 3 ~~~~~Lp~d~~~~~l~r~p~~~~~~~~~v~k~w~~l~~s~~~~ 45 (317)
..|..||+|++.+||+++|..++.+++.|||+|+.++.++.+-
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 4688999999999999999999999999999999999888753
No 23
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.12 E-value=1.4e-06 Score=75.22 Aligned_cols=49 Identities=24% Similarity=0.421 Sum_probs=44.7
Q ss_pred CcCCCCcHHHHHHHhccCCCCchh-hhhhcCHhHHHhhcChhhHHHHHhc
Q 021080 3 ELIEGLPDAVALRCLARVPFFLHP-KLELVSRSWRAAIRSPELFKARQEV 51 (317)
Q Consensus 3 ~~~~~Lp~d~~~~~l~r~p~~~~~-~~~~v~k~w~~l~~s~~~~~~~~~~ 51 (317)
..++.||+|++++||++||.+++. ++++|||+|+.++.++.|-+.+...
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 467899999999999999999999 9999999999999999988776654
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.03 E-value=0.0024 Score=55.93 Aligned_cols=184 Identities=11% Similarity=-0.079 Sum_probs=109.3
Q ss_pred CCceEEEeCCCCCEeecC-----CCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCC
Q 021080 66 ENLWQLYDPLRDLWITLP-----VLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGF 140 (317)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~-----~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~ 140 (317)
...+..||+.+++...-- ..+. +.....++..++++|+.....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~l---g~~~~~i~~~~~~lyv~~~~~----------------------------- 63 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKL---GDVAQSMVIRDGIGWIVVNNS----------------------------- 63 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCC---BSCEEEEEEETTEEEEEEGGG-----------------------------
T ss_pred CceEEEEECCCCEEhhhhHhhhcCccc---CccceEEEEECCEEEEEEcCC-----------------------------
Confidence 568999999998875421 1111 133355677899999998632
Q ss_pred CCCcCCCceeEEeeCCCCce-eeCCCCCccCCCceEEEE-ECCEEEEEecCceeEEEEeCCCCcEE-eccCCc------c
Q 021080 141 TSCRKSISQAEMYDPEKDVW-VPIPDLHRTHNSACTGVV-IGGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGW------L 211 (317)
Q Consensus 141 ~~~~~~~~~~~~yd~~t~~W-~~~~~~p~~~r~~~~~~~-~~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~------~ 211 (317)
..+.++|+.+.+- ..++....+ ...++ -++++|+.......+.++|+.+.+-. .++... .
T Consensus 64 -------~~v~viD~~t~~~~~~i~~~~~p----~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~ 132 (328)
T 3dsm_A 64 -------HVIFAIDINTFKEVGRITGFTSP----RYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGS 132 (328)
T ss_dssp -------TEEEEEETTTCCEEEEEECCSSE----EEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCB
T ss_pred -------CEEEEEECcccEEEEEcCCCCCC----cEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCC
Confidence 4566777777665 233333223 22333 68899999754678999999988743 233222 2
Q ss_pred CCcEEEEcCeEEEEe---CcEEEEecCCceEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEee
Q 021080 212 QGPMAIVHDSVYLMS---HGLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLT 288 (317)
Q Consensus 212 ~~~~~~~~~~ly~~g---~~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd 288 (317)
+..++..++++|+.. .+.+..+|+++-+.+..++.. .......+.-+|++|+........... ....+.+.++|
T Consensus 133 p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~--~~~~~~v~~id 209 (328)
T 3dsm_A 133 TEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPY--GYEAPSLYRID 209 (328)
T ss_dssp CCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSS--CBCCCEEEEEE
T ss_pred cceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCcc--ccCCceEEEEE
Confidence 345666789999996 468999998873333333210 111112223368888875322111000 00135799999
Q ss_pred cCCCCCcee
Q 021080 289 VGAERPTWR 297 (317)
Q Consensus 289 ~~~~~~~W~ 297 (317)
++++ +..
T Consensus 210 ~~t~--~v~ 216 (328)
T 3dsm_A 210 AETF--TVE 216 (328)
T ss_dssp TTTT--EEE
T ss_pred CCCC--eEE
Confidence 9988 544
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.00 E-value=0.0029 Score=55.39 Aligned_cols=180 Identities=12% Similarity=-0.018 Sum_probs=104.9
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCE-eecCCCCccccccCCeeEEE-eCCEEEEEcCcCCCCCCCCCCCCCcccccceeE
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLW-ITLPVLPSKIRHLAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W-~~~~~~p~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
++.+|+.... ...+..+|+.+.+- .+++.... ...++. .++++||.....
T Consensus 53 ~~~lyv~~~~-~~~v~viD~~t~~~~~~i~~~~~------p~~i~~~~~g~lyv~~~~~--------------------- 104 (328)
T 3dsm_A 53 DGIGWIVVNN-SHVIFAIDINTFKEVGRITGFTS------PRYIHFLSDEKAYVTQIWD--------------------- 104 (328)
T ss_dssp TTEEEEEEGG-GTEEEEEETTTCCEEEEEECCSS------EEEEEEEETTEEEEEEBSC---------------------
T ss_pred CCEEEEEEcC-CCEEEEEECcccEEEEEcCCCCC------CcEEEEeCCCeEEEEECCC---------------------
Confidence 5678877652 46799999998876 34432222 244444 678999987431
Q ss_pred ecccCCCCCCCcCCCceeEEeeCCCCceee---CCCCCccCCCceEEEEECCEEEEEec-CceeEEEEeCCCCcEEe-cc
Q 021080 133 YDPVTRGFTSCRKSISQAEMYDPEKDVWVP---IPDLHRTHNSACTGVVIGGKVHVLHK-GLSTVQVLDHMGLGWTV-ED 207 (317)
Q Consensus 133 ~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~---~~~~p~~~r~~~~~~~~~g~lyv~gG-~~~~v~~yd~~~~~W~~-~~ 207 (317)
..+.++|+.+++-.. ++............++.++++|+..- ..+.+.++|+.+++... ++
T Consensus 105 ---------------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 105 ---------------YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp ---------------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred ---------------CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 456677777765432 22210000011223447999999964 46789999999987542 32
Q ss_pred CCccCCcEEE-EcCeEEEEeC------------cEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCC
Q 021080 208 YGWLQGPMAI-VHDSVYLMSH------------GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPD 272 (317)
Q Consensus 208 ~~~~~~~~~~-~~~~ly~~g~------------~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~ 272 (317)
....+..++. -+|++|+... +.++.+|+++-+.+..+..+.......++.. ++.||+..+
T Consensus 170 ~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----- 244 (328)
T 3dsm_A 170 IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----- 244 (328)
T ss_dssp CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-----
T ss_pred cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-----
Confidence 2222233333 3688988864 4699999887333322221112222344444 567888643
Q ss_pred CCceecccCcceeEeecCCC
Q 021080 273 RWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 273 ~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+++||++++
T Consensus 245 ----------~v~~~d~~t~ 254 (328)
T 3dsm_A 245 ----------DIWRMPVEAD 254 (328)
T ss_dssp ----------SEEEEETTCS
T ss_pred ----------EEEEEECCCC
Confidence 5678888877
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.99 E-value=0.0016 Score=54.61 Aligned_cols=153 Identities=14% Similarity=0.003 Sum_probs=102.4
Q ss_pred CCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCC
Q 021080 93 AHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNS 172 (317)
Q Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~ 172 (317)
+-..+...++.+|+..|..+ .+.+.++|+++++=..--+++.. .+
T Consensus 22 ftqGL~~~~~~LyestG~~g----------------------------------~S~v~~vD~~tgkv~~~~~l~~~-~f 66 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG----------------------------------RSSVRKVDLETGRILQRAEVPPP-YF 66 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT----------------------------------SCEEEEEETTTCCEEEEEECCTT-CC
T ss_pred ccccEEEECCEEEEECCCCC----------------------------------CceEEEEECCCCCEEEEEeCCCC-cc
Confidence 44467778899999998643 25677888888876555566655 56
Q ss_pred ceEEEEECCEEEEEecCceeEEEEeCCCCcE-EeccCCccCCcEEEEcCeEEEEeC-cEEEEecCCceEEEeccccc---
Q 021080 173 ACTGVVIGGKVHVLHKGLSTVQVLDHMGLGW-TVEDYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDVRKVVASASEF--- 247 (317)
Q Consensus 173 ~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~ly~~g~-~~~~~yd~~~W~~v~~~~~~--- 247 (317)
+...+..+++||++....+.+.+||+.+.+- ..++........+.-++++|+..+ +.++.+|+++-+.+..++..
T Consensus 67 geGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 67 GAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred eeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 6667788999999987788999999988763 233332223344444678999877 78999999985544444321
Q ss_pred cc-cccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 248 RR-RIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 248 ~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+ +.--.+...+|+||+--- ..++|.+-|++++
T Consensus 147 ~~~~~lNeLe~~~G~lyanvw------------~s~~I~vIDp~tG 180 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELLANVW------------LTSRIARIDPASG 180 (243)
T ss_dssp EECCCEEEEEEETTEEEEEET------------TTTEEEEECTTTC
T ss_pred cccccceeeEEeCCEEEEEEC------------CCCeEEEEECCCC
Confidence 11 111224455888885321 2347888888887
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.88 E-value=0.0016 Score=57.90 Aligned_cols=113 Identities=16% Similarity=0.097 Sum_probs=71.5
Q ss_pred ceEEEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCccCCcEEEEcCeEEEEeC-cEEEEecCCc----eEEEeccc
Q 021080 173 ACTGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDV----RKVVASAS 245 (317)
Q Consensus 173 ~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~ly~~g~-~~~~~yd~~~----W~~v~~~~ 245 (317)
....++.++++|+... ...+.++|..+++ |+...........+..++.+|+... +.++.+|.++ |+.-...+
T Consensus 96 ~~~~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 96 SGGVTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp EEEEEEETTEEEEEET-TSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred ccCceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 3445678999998654 4679999998775 8765433223344566888888764 7899999754 98755433
Q ss_pred cccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 246 EFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 246 ~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
....+.....+..++.||+- .. ...+..||+++++..|+.-
T Consensus 175 ~~~~~~~~~~~~~~~~v~~g-~~------------~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 175 SLSLRGESAPTTAFGAAVVG-GD------------NGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp ----CCCCCCEEETTEEEEC-CT------------TTEEEEEETTTCCEEEEEE
T ss_pred ceeecCCCCcEEECCEEEEE-cC------------CCEEEEEECCCCcEEEEEe
Confidence 21122223344557777762 21 1267889998887788764
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.84 E-value=0.0019 Score=54.75 Aligned_cols=151 Identities=9% Similarity=-0.080 Sum_probs=98.5
Q ss_pred eeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCce
Q 021080 95 FGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSAC 174 (317)
Q Consensus 95 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~ 174 (317)
..+...++.+|+..|..+ .+.+.++|+++++=..--+++.. .++.
T Consensus 46 qGL~~~~~~LyestG~~g----------------------------------~S~v~~vD~~Tgkv~~~~~l~~~-~Fge 90 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----------------------------------RSSIRKVDIESGKTLQQIELGKR-YFGE 90 (262)
T ss_dssp EEEEEETTEEEEEEEETT----------------------------------EEEEEEECTTTCCEEEEEECCTT-CCEE
T ss_pred ceEEEECCEEEEECCCCC----------------------------------CceEEEEECCCCcEEEEEecCCc-ccee
Confidence 455666899999998643 25677788887765444445444 4555
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCcE-EeccCCccCCcEEEEcCeEEEEeC-cEEEEecCCceEEEecccccc-ccc
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLGW-TVEDYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDVRKVVASASEFR-RRI 251 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~ly~~g~-~~~~~yd~~~W~~v~~~~~~~-~r~ 251 (317)
..+..+++||++....+.+.+||+.+.+- ..++........+.-++++|+..+ +.++.+|+++-+.+..++... .+.
T Consensus 91 Git~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~ 170 (262)
T 3nol_A 91 GISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE 170 (262)
T ss_dssp EEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEE
T ss_pred EEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc
Confidence 67788999999987788999999988763 334432223445545677888876 689999999855554444210 111
Q ss_pred --c-EEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 --G-FAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 --~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
. -.+...+|+||+-- ...+.|.+-|++++
T Consensus 171 ~~~lNELe~~~G~lyan~------------w~~~~I~vIDp~tG 202 (262)
T 3nol_A 171 LPELNELEWVDGEIFANV------------WQTNKIVRIDPETG 202 (262)
T ss_dssp CCCEEEEEEETTEEEEEE------------TTSSEEEEECTTTC
T ss_pred ccccceeEEECCEEEEEE------------ccCCeEEEEECCCC
Confidence 1 12344588888632 12347888899887
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.83 E-value=0.0026 Score=53.28 Aligned_cols=172 Identities=10% Similarity=-0.022 Sum_probs=108.4
Q ss_pred CceEEEEEeCC-CCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDP-ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.||+..|.. .+.+..+|+.+++=..-.+++.. ..+..++..+++||+....+
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---~fgeGi~~~~~~ly~ltw~~---------------------- 84 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP---YFGAGIVAWRDRLIQLTWRN---------------------- 84 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT---CCEEEEEEETTEEEEEESSS----------------------
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC---cceeEEEEeCCEEEEEEeeC----------------------
Confidence 56888887754 67899999999987665566653 56677888999999986532
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcE-EeccCC---
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGW-TVEDYG--- 209 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W-~~~~~~--- 209 (317)
..+++||+++.+=. ..++.+ ..+-+.+..+++||+.-| .+.+..+|+++.+- ..++..
T Consensus 85 --------------~~v~v~D~~tl~~~--~ti~~~-~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 85 --------------HEGFVYDLATLTPR--ARFRYP-GEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp --------------SEEEEEETTTTEEE--EEEECS-SCCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETT
T ss_pred --------------CEEEEEECCcCcEE--EEEeCC-CCceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCC
Confidence 45666776654422 222222 223344455678999887 77899999998753 222211
Q ss_pred cc---CCcEEEEcCeEEEEeC--cEEEEecCCc-----eEEEecccccccc-------ccEEEEEE--CCeEEEEeCcc
Q 021080 210 WL---QGPMAIVHDSVYLMSH--GLIIKQHRDV-----RKVVASASEFRRR-------IGFAMIGM--GDDIYVIGGVI 269 (317)
Q Consensus 210 ~~---~~~~~~~~~~ly~~g~--~~~~~yd~~~-----W~~v~~~~~~~~r-------~~~~~~~~--~~~lyv~GG~~ 269 (317)
.+ ..-+...++++|+... +.+...|+++ |-.++.+.....+ .--+++.. ++++||.|-.-
T Consensus 147 ~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp EECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred cccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 11 1123346899998864 7899999987 6665544321111 11334443 57888887643
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.81 E-value=0.004 Score=55.35 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=85.9
Q ss_pred cCceEEEEEeCCCCceEEEeCCCCC--EeecCCCCcc----ccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccc
Q 021080 54 SENLLCVCAFDPENLWQLYDPLRDL--WITLPVLPSK----IRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFAT 127 (317)
Q Consensus 54 ~~~~l~v~gg~~~~~~~~yd~~~~~--W~~~~~~p~~----~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 127 (317)
.++.||+... ...+++||..+++ |+.-...... .........+..++.||+....
T Consensus 52 ~~~~v~~~~~--~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----------------- 112 (376)
T 3q7m_A 52 ADNVVYAADR--AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK----------------- 112 (376)
T ss_dssp ETTEEEEECT--TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-----------------
T ss_pred ECCEEEEEcC--CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-----------------
Confidence 3677887654 3489999998764 7643221100 0012234456778889886531
Q ss_pred cceeEecccCCCCCCCcCCCceeEEeeCCCC--ceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCc--E
Q 021080 128 NEVWSYDPVTRGFTSCRKSISQAEMYDPEKD--VWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG--W 203 (317)
Q Consensus 128 ~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W 203 (317)
..+.++|.+++ .|+.-..- . .....++.++.+|+... ...+..||+.+++ |
T Consensus 113 --------------------g~l~a~d~~tG~~~W~~~~~~--~--~~~~p~~~~~~v~v~~~-~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 113 --------------------AQVYALNTSDGTVAWQTKVAG--E--ALSRPVVSDGLVLIHTS-NGQLQALNEADGAVKW 167 (376)
T ss_dssp --------------------SEEEEEETTTCCEEEEEECSS--C--CCSCCEEETTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred --------------------CEEEEEECCCCCEEEEEeCCC--c--eEcCCEEECCEEEEEcC-CCeEEEEECCCCcEEE
Confidence 34556666655 36543211 1 11223466888888654 4579999998775 8
Q ss_pred EeccCCcc-----CCcEEEEcCeEEEEeC-cEEEEecCCc----eEEEec
Q 021080 204 TVEDYGWL-----QGPMAIVHDSVYLMSH-GLIIKQHRDV----RKVVAS 243 (317)
Q Consensus 204 ~~~~~~~~-----~~~~~~~~~~ly~~g~-~~~~~yd~~~----W~~v~~ 243 (317)
+....... ....+..++.+|+... +.++.+|+++ |+.-..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 168 TVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRIS 217 (376)
T ss_dssp EEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECC
T ss_pred EEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecc
Confidence 76543222 1344556888887653 6899999764 887543
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.70 E-value=0.002 Score=54.59 Aligned_cols=172 Identities=8% Similarity=-0.065 Sum_probs=106.1
Q ss_pred CceEEEEEeCC-CCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDP-ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.||+..|.. .+.+..+|+.+++-..--+++.. .++..++..+++||+....+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~---~FgeGit~~g~~ly~ltw~~---------------------- 106 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR---YFGEGISDWKDKIVGLTWKN---------------------- 106 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT---CCEEEEEEETTEEEEEESSS----------------------
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc---cceeEEEEeCCEEEEEEeeC----------------------
Confidence 56899888754 56899999999987544455542 45566888999999996532
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCc-EEeccCCc--
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG-WTVEDYGW-- 210 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~-W~~~~~~~-- 210 (317)
..+.+||+++.+=. ..++.+ -.+-+.+..++.||+.-| .+.+..+|+++.+ -..++...
T Consensus 107 --------------~~v~v~D~~t~~~~--~ti~~~-~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 107 --------------GLGFVWNIRNLRQV--RSFNYD-GEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp --------------SEEEEEETTTCCEE--EEEECS-SCCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETT
T ss_pred --------------CEEEEEECccCcEE--EEEECC-CCceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCC
Confidence 45666776665432 122222 222234445667888877 6789999999865 23333211
Q ss_pred -cCC---cEEEEcCeEEEEeC--cEEEEecCCc-----eEEEecccccc------ccccEEEEEE--CCeEEEEeCcc
Q 021080 211 -LQG---PMAIVHDSVYLMSH--GLIIKQHRDV-----RKVVASASEFR------RRIGFAMIGM--GDDIYVIGGVI 269 (317)
Q Consensus 211 -~~~---~~~~~~~~ly~~g~--~~~~~yd~~~-----W~~v~~~~~~~------~r~~~~~~~~--~~~lyv~GG~~ 269 (317)
+.. .+...+|+||+... +.+...|+++ |-.++.+.... ...-.+++.. ++++||.|-.-
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 101 24456899998864 7899999987 55555443211 0111344444 46788877643
No 32
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.65 E-value=0.0048 Score=52.30 Aligned_cols=148 Identities=13% Similarity=-0.046 Sum_probs=96.2
Q ss_pred eeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCce
Q 021080 95 FGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSAC 174 (317)
Q Consensus 95 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~ 174 (317)
..+...++.+|+..|..+ .+.++|+++++=..-- ++.. .++.
T Consensus 58 qGL~~~~~~Ly~stG~~g------------------------------------~v~~iD~~Tgkv~~~~-l~~~-~Fge 99 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------------------------------------TLRQLSLESAQPVWME-RLGN-IFAE 99 (268)
T ss_dssp EEEEEETTEEEEEETTTT------------------------------------EEEECCSSCSSCSEEE-ECTT-CCEE
T ss_pred ceEEEECCEEEEEcCCCC------------------------------------EEEEEECCCCcEEeEE-CCCC-ccee
Confidence 456677899999998642 2566777766543222 4433 4555
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCcE-EeccCCccCCcEEEEcCeEEEEeC-cEEEEecCCceEEEecccccc-cc-
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLGW-TVEDYGWLQGPMAIVHDSVYLMSH-GLIIKQHRDVRKVVASASEFR-RR- 250 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~ly~~g~-~~~~~yd~~~W~~v~~~~~~~-~r- 250 (317)
..+..+++||++....+.+.+||+.+.+- ..++........+.-+++||+..+ +.++.+|+++-+.+..++... ++
T Consensus 100 Git~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 100 GLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp EEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred EEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 56778899999987788999999988763 344433224455656778999986 789999999855555444211 11
Q ss_pred --ccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 --IGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 --~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.--.+...+|+||+-- ...++|.+-|++++
T Consensus 180 v~~lNeLe~~dG~lyanv------------w~s~~I~vIDp~TG 211 (268)
T 3nok_A 180 VELINELECANGVIYANI------------WHSSDVLEIDPATG 211 (268)
T ss_dssp CCCEEEEEEETTEEEEEE------------TTCSEEEEECTTTC
T ss_pred cccccccEEeCCEEEEEE------------CCCCeEEEEeCCCC
Confidence 1112344588888521 12347888899887
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.50 E-value=0.02 Score=48.63 Aligned_cols=132 Identities=6% Similarity=-0.112 Sum_probs=82.8
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCc-EEeccCC-ccCCcEEEEcCeEEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG-WTVEDYG-WLQGPMAIVHDSVYLM 225 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~-W~~~~~~-~~~~~~~~~~~~ly~~ 225 (317)
+.+.++|+.+++=..--+++.. .+....+..+++||+.....+.+.+||+.+.+ =..++.. +....++.-++++|+.
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs 122 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDS-YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGS 122 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEE
T ss_pred CEEEEEECCCCCEEEEEecCCC-cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEE
Confidence 5677788877764433233333 34455667788999998777889999998765 2334322 2222333335679988
Q ss_pred eC-cEEEEecCCceEEEecccccc-cc---ccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 226 SH-GLIIKQHRDVRKVVASASEFR-RR---IGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 226 g~-~~~~~yd~~~W~~v~~~~~~~-~r---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+ +.+..+|+++-+.+..++... ++ .-..+...+++||+--. ..++|.+-|++++
T Consensus 123 ~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~------------~~~~V~vID~~tg 182 (266)
T 2iwa_A 123 DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIW------------QTDCIARISAKDG 182 (266)
T ss_dssp CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET------------TSSEEEEEETTTC
T ss_pred CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecC------------CCCeEEEEECCCC
Confidence 76 789999998866555555211 01 11233344888886532 2357888999877
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.47 E-value=0.016 Score=49.29 Aligned_cols=171 Identities=8% Similarity=-0.034 Sum_probs=104.8
Q ss_pred CceEEEEEeC-CCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFD-PENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~-~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.||+..|. ..+.+..+|+.+++=..--+++.. .....++..+++||+..-.+
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~---~fgeGi~~~g~~lyv~t~~~---------------------- 85 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS---YFGEGLTLLNEKLYQVVWLK---------------------- 85 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT---CCEEEEEEETTEEEEEETTC----------------------
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC---cceEEEEEeCCEEEEEEecC----------------------
Confidence 3689998774 368999999999986543344432 34456777899999997532
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCcee-eCCC-CCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCc-EEeccCCc
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWV-PIPD-LHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG-WTVEDYGW 210 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~-~~~~-~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~-W~~~~~~~ 210 (317)
..+.+||+.+.+=. .++- ++.+ ...+.-++++|+.-| .+.+..+|+++.+ -..++...
T Consensus 86 --------------~~v~viD~~t~~v~~~i~~g~~~g----~glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 86 --------------NIGFIYDRRTLSNIKNFTHQMKDG----WGLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp --------------SEEEEEETTTTEEEEEEECCSSSC----CEEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEE
T ss_pred --------------CEEEEEECCCCcEEEEEECCCCCe----EEEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECC
Confidence 45666776655321 1211 2333 223344567998876 7789999998865 33333211
Q ss_pred ---c---CCcEEEEcCeEEEEeC--cEEEEecCCceEEEecccccc--c----------cccEEEEEE--CCeEEEEeCc
Q 021080 211 ---L---QGPMAIVHDSVYLMSH--GLIIKQHRDVRKVVASASEFR--R----------RIGFAMIGM--GDDIYVIGGV 268 (317)
Q Consensus 211 ---~---~~~~~~~~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~--~----------r~~~~~~~~--~~~lyv~GG~ 268 (317)
+ ...+...++++|+... +.+...|+++++.+..++... . ..-.+++.. ++++||.|+.
T Consensus 147 ~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 147 NGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp TTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred CCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 0 1123345889998864 799999998865555444210 0 011344444 5689998875
Q ss_pred c
Q 021080 269 I 269 (317)
Q Consensus 269 ~ 269 (317)
.
T Consensus 227 ~ 227 (266)
T 2iwa_A 227 W 227 (266)
T ss_dssp C
T ss_pred C
Confidence 4
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.98 E-value=0.0081 Score=50.91 Aligned_cols=103 Identities=10% Similarity=-0.019 Sum_probs=75.8
Q ss_pred eEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc---CCcEEEEcCeEEEEe--CcEEEEecCCceEEEecccccc
Q 021080 174 CTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL---QGPMAIVHDSVYLMS--HGLIIKQHRDVRKVVASASEFR 248 (317)
Q Consensus 174 ~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~ly~~g--~~~~~~yd~~~W~~v~~~~~~~ 248 (317)
....+.++.||+..|....+..+|+++++=...- +.. ...++..+++||++. .+.++.||+++-+.+...+-
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-- 134 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY-- 134 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC--
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC--
Confidence 4556778999999996556999999988733221 222 233566789999998 48999999999887777773
Q ss_pred ccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 249 RRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 249 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...+.+++..+++||+.-| .+.+..+|+++.
T Consensus 135 ~~eGwGLt~Dg~~L~vSdG-------------s~~l~~iDp~T~ 165 (268)
T 3nok_A 135 SGEGWGLCYWNGKLVRSDG-------------GTMLTFHEPDGF 165 (268)
T ss_dssp SSCCCCEEEETTEEEEECS-------------SSEEEEECTTTC
T ss_pred CCceeEEecCCCEEEEECC-------------CCEEEEEcCCCC
Confidence 3445677788889999865 136788888876
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.91 E-value=0.14 Score=42.45 Aligned_cols=181 Identities=15% Similarity=0.074 Sum_probs=91.4
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.+|+.+......+..||+.+........... ..-.+++.. ++.+|+... .
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~-~---------------------- 86 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGTVYVTDF-N---------------------- 86 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC-----EECCCCSC----CSCCCEEECTTCCEEEEET-T----------------------
T ss_pred CCCEEEEccCCCCcEEEecCCCcccceEeeCCc----CCcceeEECCCCCEEEEcC-C----------------------
Confidence 445777232234678889987766544422111 122344443 467888764 2
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCCc-
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW- 210 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~- 210 (317)
..+.+||+.++.-..+.... ......+.+ +|++|+.......+..||..+..........
T Consensus 87 --------------~~i~~~d~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 149 (270)
T 1rwi_B 87 --------------NRVVTLAAGSNNQTVLPFDG---LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL 149 (270)
T ss_dssp --------------TEEEEECTTCSCCEECCCCS---CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC
T ss_pred --------------CEEEEEeCCCceEeeeecCC---cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccC
Confidence 23455665554433332111 112223333 6789998655567899988776544332111
Q ss_pred -cCCcEEEE-cCeEEEEeC--cEEEEecCCceEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCccee
Q 021080 211 -LQGPMAIV-HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVD 285 (317)
Q Consensus 211 -~~~~~~~~-~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~ 285 (317)
.+..++.- ++++|+... +.+..|+.+.-........ ......+++.. +|.||+.... .+.|.
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~------------~~~v~ 216 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHN------------TNQVV 216 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCS-SCCSEEEEEECTTCCEEEEETT------------TSCEE
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeeccc-CCCCceEEEECCCCCEEEEECC------------CCcEE
Confidence 12334433 578999874 6899999876222111110 11122233433 4588887531 12577
Q ss_pred EeecCCC
Q 021080 286 VLTVGAE 292 (317)
Q Consensus 286 ~yd~~~~ 292 (317)
+||+++.
T Consensus 217 ~~~~~~~ 223 (270)
T 1rwi_B 217 KLLAGST 223 (270)
T ss_dssp EECTTCS
T ss_pred EEcCCCC
Confidence 7887665
No 37
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.89 E-value=0.00032 Score=60.08 Aligned_cols=50 Identities=20% Similarity=0.226 Sum_probs=43.9
Q ss_pred CCcCCCCcHHHHHHHhccCCCCchhhhhhcCHhHHHhhcChhhHHHHHhc
Q 021080 2 SELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPELFKARQEV 51 (317)
Q Consensus 2 ~~~~~~Lp~d~~~~~l~r~p~~~~~~~~~v~k~w~~l~~s~~~~~~~~~~ 51 (317)
+..|..||+|++..||+.|+.++++++..|||.|+.+..++.+-+.....
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~r 51 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLR 51 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHS
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhc
Confidence 34577899999999999999999999999999999999999887665443
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.85 E-value=0.033 Score=49.16 Aligned_cols=178 Identities=15% Similarity=0.117 Sum_probs=91.1
Q ss_pred ceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 56 NLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 56 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
..+|+.++. ...+..+|..+++-...-..+. .-.+++.. +..||+.++.+
T Consensus 2 ~~l~vs~~~-d~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d---------------------- 53 (391)
T 1l0q_A 2 TFAYIANSE-SDNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAHS---------------------- 53 (391)
T ss_dssp EEEEEEETT-TTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGGG----------------------
T ss_pred CEEEEEcCC-CCEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECCCC----------------------
Confidence 356666543 4689999998876544322222 11233332 34577777542
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE-CC-EEEEEecCceeEEEEeCCCCcEEeccCCcc
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-GG-KVHVLHKGLSTVQVLDHMGLGWTVEDYGWL 211 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~-~g-~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~ 211 (317)
..+.+||..+++-...-.. . ..-...+.. ++ .||+.+.....+..||+.+++-...-....
T Consensus 54 --------------~~i~v~d~~~~~~~~~~~~--~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 116 (391)
T 1l0q_A 54 --------------NDVSIIDTATNNVIATVPA--G-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK 116 (391)
T ss_dssp --------------TEEEEEETTTTEEEEEEEC--S-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred --------------CeEEEEECCCCeEEEEEEC--C-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC
Confidence 3566677766654332111 1 111122222 34 576766555789999999886433221111
Q ss_pred -CCcEEEE-cC-eEEEEeC--cEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcce
Q 021080 212 -QGPMAIV-HD-SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDV 284 (317)
Q Consensus 212 -~~~~~~~-~~-~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v 284 (317)
...++.. ++ .+|+.+. +.++.+|..+-+.+..++. ......++.. +..||+.++.+ ..+
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~------------~~v 182 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDS------------MSI 182 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTT------------TEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCC------------CEE
Confidence 1122222 33 4666654 7899999876333333321 1111222222 33566665421 257
Q ss_pred eEeecCCC
Q 021080 285 DVLTVGAE 292 (317)
Q Consensus 285 ~~yd~~~~ 292 (317)
.+||+.++
T Consensus 183 ~~~d~~~~ 190 (391)
T 1l0q_A 183 SVIDTVTN 190 (391)
T ss_dssp EEEETTTT
T ss_pred EEEECCCC
Confidence 88888776
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.79 E-value=0.034 Score=49.13 Aligned_cols=179 Identities=13% Similarity=0.110 Sum_probs=93.2
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeE
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
+..|++.+. ....+..||..+++-......+. .-.+++.. +..+|+.++.+
T Consensus 85 g~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~--------------------- 137 (391)
T 1l0q_A 85 GKQVYVTNM-ASSTLSVIDTTSNTVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGD--------------------- 137 (391)
T ss_dssp SSEEEEEET-TTTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEETTT---------------------
T ss_pred CCEEEEEEC-CCCEEEEEECCCCeEEEEEeCCC-----CcceEEECCCCCEEEEEeCCC---------------------
Confidence 445655553 23678999998876544322221 11233332 34577776532
Q ss_pred ecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE-C-CEEEEEecCceeEEEEeCCCCcEEeccCCc
Q 021080 133 YDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI-G-GKVHVLHKGLSTVQVLDHMGLGWTVEDYGW 210 (317)
Q Consensus 133 ~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~-~-g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~ 210 (317)
..+.+||..+++....-..... ....+.. + ..+|+.++....+..||+.+++-...-...
T Consensus 138 ---------------~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 199 (391)
T 1l0q_A 138 ---------------KTVSVINTVTKAVINTVSVGRS---PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE 199 (391)
T ss_dssp ---------------TEEEEEETTTTEEEEEEECCSS---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred ---------------CEEEEEECCCCcEEEEEecCCC---cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC
Confidence 3566677766654433221111 1122222 3 367777766678999999887643322111
Q ss_pred cC-CcEEEE--cCeEEEEe----CcEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccC
Q 021080 211 LQ-GPMAIV--HDSVYLMS----HGLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPM 281 (317)
Q Consensus 211 ~~-~~~~~~--~~~ly~~g----~~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 281 (317)
.. ..++.. +..+|+.+ .+.++.||.+..+.+..++. ......+... +..||+.++.+
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~s~~~d------------ 265 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV--GPDPAGIAVTPDGKKVYVALSFX------------ 265 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTT------------
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec--CCCccEEEEccCCCEEEEEcCCC------------
Confidence 11 111211 33566664 37899999887555544442 1111222222 33566665432
Q ss_pred cceeEeecCCC
Q 021080 282 SDVDVLTVGAE 292 (317)
Q Consensus 282 ~~v~~yd~~~~ 292 (317)
+.+.+||++++
T Consensus 266 ~~v~v~d~~~~ 276 (391)
T 1l0q_A 266 NTVSVIDTATN 276 (391)
T ss_dssp TEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 26778888766
No 40
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.68 E-value=0.1 Score=50.57 Aligned_cols=67 Identities=18% Similarity=0.205 Sum_probs=46.2
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc--EEeccC-C-----ccCCcEEEEcCeEEEEeC-------cEEEEecCCc--
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDY-G-----WLQGPMAIVHDSVYLMSH-------GLIIKQHRDV-- 237 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~-~-----~~~~~~~~~~~~ly~~g~-------~~~~~yd~~~-- 237 (317)
..++.+++||+... ...+.++|..+++ |+.-.. . ....+.++.++.+|+... +.++.||.++
T Consensus 123 ~~a~~~~~v~v~~~-dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 123 GVALWKGKVYVGAW-DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp CCEEETTEEEEECT-TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CceEECCEEEEEcC-CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCc
Confidence 34568899998754 4679999998775 886533 1 112344557889988752 6799999765
Q ss_pred --eEEEe
Q 021080 238 --RKVVA 242 (317)
Q Consensus 238 --W~~v~ 242 (317)
|+.-.
T Consensus 202 ~~W~~~~ 208 (677)
T 1kb0_A 202 RKWRWFS 208 (677)
T ss_dssp EEEEEES
T ss_pred EEEEecc
Confidence 88644
No 41
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.63 E-value=0.28 Score=42.15 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=55.1
Q ss_pred CCEEEEEe-cCceeEEEEeCCCCcEEe-cc-CCccCCcEEEE-c-CeEEEEeC-cEEEEecCCceEEEeccccc---ccc
Q 021080 180 GGKVHVLH-KGLSTVQVLDHMGLGWTV-ED-YGWLQGPMAIV-H-DSVYLMSH-GLIIKQHRDVRKVVASASEF---RRR 250 (317)
Q Consensus 180 ~g~lyv~g-G~~~~v~~yd~~~~~W~~-~~-~~~~~~~~~~~-~-~~ly~~g~-~~~~~yd~~~W~~v~~~~~~---~~r 250 (317)
++.+|+.+ +....+..+|+.+.+-.. ++ ........+.. + +.+|+... +.+..+|.++.+.+...+.. ...
T Consensus 152 g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 152 TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp TTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred CCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 35688876 345679999998876332 22 11112233332 3 45777664 78889998774443332210 111
Q ss_pred ccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 IGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 ~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...+++.. ++.+|+... ..+.+.+||++++
T Consensus 232 ~~~~~~~s~dg~~l~~~~~------------~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDS------------KAAEVLVVDTRNG 263 (353)
T ss_dssp CEEEEEEETTTTEEEEEES------------SSSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEEeC------------CCCEEEEEECCCC
Confidence 11223332 456776642 1247889999877
No 42
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.53 E-value=0.33 Score=41.70 Aligned_cols=171 Identities=11% Similarity=0.017 Sum_probs=87.5
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEec
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d 134 (317)
+..+|+........++.+|+.+.+-...-+.... .........-++.+|+... +
T Consensus 152 g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~-~----------------------- 205 (353)
T 3vgz_A 152 TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK--MSTGLALDSEGKRLYTTNA-D----------------------- 205 (353)
T ss_dssp TTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT--TCCCCEEETTTTEEEEECT-T-----------------------
T ss_pred CCEEEEEecCCCceEEEEcCCCCceEEEecCCCC--ccceEEECCCCCEEEEEcC-C-----------------------
Confidence 4567777644456799999987765432221111 0111222223456776653 1
Q ss_pred ccCCCCCCCcCCCceeEEeeCCCCceeeCCCC-Cc-cCCCceE-EEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCC
Q 021080 135 PVTRGFTSCRKSISQAEMYDPEKDVWVPIPDL-HR-THNSACT-GVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG 209 (317)
Q Consensus 135 ~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~-~~r~~~~-~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~ 209 (317)
..+.+||..+.+-...-.. .. + ..... .++. ++.+|+.......+..||+.+.+....-..
T Consensus 206 -------------~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 206 -------------GELITIDTADNKILSRKKLLDDGK-EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp -------------SEEEEEETTTTEEEEEEECCCSSS-CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred -------------CeEEEEECCCCeEEEEEEcCCCCC-CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 3455666666543221111 11 1 11222 2232 456887766667899999988764322222
Q ss_pred ccCCcEEEE-cC-eEEEEeC--cEEEEecCCceEEEeccccccccccEEEEEE-CC-eEEEEeC
Q 021080 210 WLQGPMAIV-HD-SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GD-DIYVIGG 267 (317)
Q Consensus 210 ~~~~~~~~~-~~-~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~-~~-~lyv~GG 267 (317)
.....++.. ++ .+|+... +.+..+|.++.+.+...+. ......++.. ++ .||+...
T Consensus 272 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 272 PESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT--PTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp SSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC--CSEEEEEEECTTSCEEEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec--CCCCCeEEEcCCCCEEEEEEc
Confidence 122233322 33 5888874 7899999887665555442 1222223322 44 4777653
No 43
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.50 E-value=0.28 Score=40.55 Aligned_cols=178 Identities=17% Similarity=0.116 Sum_probs=93.3
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.+|+... ...+..||+.......+..... ..-..++.. ++++|+.....
T Consensus 77 ~g~l~v~~~--~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~~---------------------- 128 (270)
T 1rwi_B 77 AGTVYVTDF--NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGAVYVADRGN---------------------- 128 (270)
T ss_dssp TCCEEEEET--TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTCCEEEEEGGG----------------------
T ss_pred CCCEEEEcC--CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCCCEEEEECCC----------------------
Confidence 445777664 4578899988765544422111 112334433 56788876431
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCC--CCCccCCCceEEEE-ECCEEEEEecCceeEEEEeCCCCcEEeccCCc
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVV-IGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW 210 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~r~~~~~~~-~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~ 210 (317)
..+.+||..+....... .+..+ . ..++ -+|++|+.......+..||+.+..-.......
T Consensus 129 --------------~~i~~~~~~~~~~~~~~~~~~~~p-~---~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 190 (270)
T 1rwi_B 129 --------------NRVVKLAAGSKTQTVLPFTGLNDP-D---GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD 190 (270)
T ss_dssp --------------TEEEEECTTCCSCEECCCCSCCSC-C---CEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS
T ss_pred --------------CEEEEEECCCceeEeeccccCCCc-e---eEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC
Confidence 23444554444333221 11122 1 1222 25789998765568999999877644332111
Q ss_pred -c-CCcEEEE-cCeEEEEeC--cEEEEecCCc-eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcc
Q 021080 211 -L-QGPMAIV-HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSD 283 (317)
Q Consensus 211 -~-~~~~~~~-~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 283 (317)
. +..++.- +|.+|+... +.+..|+++. -....... ....-.+++.. +|+||+.... .+.
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~~~~------------~~~ 256 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFT--GLNTPLAVAVDSDRTVYVADRG------------NDR 256 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCC--SCSCEEEEEECTTCCEEEEEGG------------GTE
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccC--CCCCceeEEECCCCCEEEEECC------------CCE
Confidence 1 1222322 468999874 6899999876 22221111 11112233333 5688887542 236
Q ss_pred eeEeecCCC
Q 021080 284 VDVLTVGAE 292 (317)
Q Consensus 284 v~~yd~~~~ 292 (317)
|.+|+....
T Consensus 257 v~~~~~~~~ 265 (270)
T 1rwi_B 257 VVKLTSLEH 265 (270)
T ss_dssp EEEECCCGG
T ss_pred EEEEcCCCc
Confidence 777777654
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.37 E-value=0.49 Score=42.10 Aligned_cols=185 Identities=12% Similarity=0.057 Sum_probs=92.6
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeE
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
+..+++.++. ...+..||..+++.......+....+......+.. ++.+|+.++.+
T Consensus 133 ~~~~~~~~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d--------------------- 190 (433)
T 3bws_A 133 NTRLAIPLLE-DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA--------------------- 190 (433)
T ss_dssp SSEEEEEBTT-SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---------------------
T ss_pred CCeEEEEeCC-CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---------------------
Confidence 4556655542 35699999998887654333221001111222233 67788877642
Q ss_pred ecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCCc
Q 021080 133 YDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW 210 (317)
Q Consensus 133 ~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~ 210 (317)
..+.+||..+.+-...-..... .....+.. +..+|+.++....+..||+.+.+....-...
T Consensus 191 ---------------~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 191 ---------------NAVHVFDLKTLAYKATVDLTGK--WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp ---------------TEEEEEETTTCCEEEEEECSSS--SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred ---------------CEEEEEECCCceEEEEEcCCCC--CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 3456677666543221111111 11222232 3467777765678999999887654332211
Q ss_pred cCCcEEEE--cC-eEEEEe---------CcEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCce
Q 021080 211 LQGPMAIV--HD-SVYLMS---------HGLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNW 276 (317)
Q Consensus 211 ~~~~~~~~--~~-~ly~~g---------~~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~ 276 (317)
.....+.. ++ .+++.+ .+.++.||..+-+.+..... ......++.. ++.+|+.++.+
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~------- 324 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCC------- 324 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTT-------
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCC-------
Confidence 11111222 34 555554 25788998766332222221 1111122222 34677776532
Q ss_pred ecccCcceeEeecCCC
Q 021080 277 DIKPMSDVDVLTVGAE 292 (317)
Q Consensus 277 ~~~~~~~v~~yd~~~~ 292 (317)
..+.+||+++.
T Consensus 325 -----~~v~v~d~~~~ 335 (433)
T 3bws_A 325 -----SKIEVYDLKEK 335 (433)
T ss_dssp -----TEEEEEETTTT
T ss_pred -----CEEEEEECCCC
Confidence 36788888866
No 45
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=96.26 E-value=0.42 Score=43.77 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=100.2
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEec
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d 134 (317)
++.+|++-| +..+.||..+++...- ..|.-+ .. -++....+++|+|-|. ..|+||
T Consensus 158 ~~~~yfFkG---~~yw~yd~~~~~~~~~-~w~gi~--~i-DAA~~~~g~~YfFkG~------------------~y~rfd 212 (460)
T 1qhu_A 158 DEGILFFQG---NRKWFWDLTTGTKKER-SWPAVG--NC-TSALRWLGRYYCFQGN------------------QFLRFN 212 (460)
T ss_dssp SSEEEEEET---TEEEEEETTTTEEEEE-CCTTSC--CC-SEEEEETTEEEEEETT------------------EEEEEC
T ss_pred CCeEEEEec---ccEEEEecccceeecc-cCCCCC--cc-chheeeCCceEEEECC------------------EEEEEc
Confidence 455677776 5789999987654321 222211 11 2344557899999884 477888
Q ss_pred ccCCCCCCCcCCCceeEEeeCCCCceeeCCC------------------CCccC-CCceEEEE-ECCEEEEEecCceeEE
Q 021080 135 PVTRGFTSCRKSISQAEMYDPEKDVWVPIPD------------------LHRTH-NSACTGVV-IGGKVHVLHKGLSTVQ 194 (317)
Q Consensus 135 ~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~------------------~p~~~-r~~~~~~~-~~g~lyv~gG~~~~v~ 194 (317)
+.++-.... ....+ ++.|..++. .-.+. ... +++. .+|++|++-| ...+
T Consensus 213 ~~~~~v~~g--yPk~i------s~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~D-Ai~~~~~G~tYFFKg--~~yW 281 (460)
T 1qhu_A 213 PVSGEVPPG--YPLDV------RDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLS-AMVSDNHGATYVFSG--SHYW 281 (460)
T ss_dssp TTTCCCCTT--CCEEH------HHHTSCCTTCCSCC-------CCCTTTTTCTTCCCC-EEEECTTCCEEEEET--TEEE
T ss_pred CccCcccCC--CCcch------hhcccCCCCCCCccccccCCccccccccccCCCCcC-EEEecCCCeEEEEeC--CEEE
Confidence 755411110 00000 112322221 11110 122 2333 5789999966 4566
Q ss_pred EEeCCCCcEE--eccCCcc----CC-cEEEEcCeEEEEeCcEEEEecCCc-eEEEecccccc------------ccccEE
Q 021080 195 VLDHMGLGWT--VEDYGWL----QG-PMAIVHDSVYLMSHGLIIKQHRDV-RKVVASASEFR------------RRIGFA 254 (317)
Q Consensus 195 ~yd~~~~~W~--~~~~~~~----~~-~~~~~~~~ly~~g~~~~~~yd~~~-W~~v~~~~~~~------------~r~~~~ 254 (317)
++|...+.+. .+...++ .. ++...++++|++-|+.++.|+..+ .+.+...|... .+.-++
T Consensus 282 R~~~~~~~~~p~~Is~~WpglP~~IDAAf~~~~~~yfFkG~~yw~f~~~~g~~~~~GyPK~I~~~lGlp~~~~~~~IDAA 361 (460)
T 1qhu_A 282 RLDTNRDGWHSWPIAHQWPQGPSTVDAAFSWEDKLYLIQDTKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAA 361 (460)
T ss_dssp ECTTGGGCCCCEEGGGTCTTSCSSCSEEEEETTEEEEEETTEEEEEECSBSCEECTTCCEEHHHHHCCCSSCCCSCCCEE
T ss_pred EEecCCCCcCccchhhhccCCCCCCcEEEEECCeEEEEeCCEEEEEeCCCCceecCCCCeEHHHhccCCCccccCcccEE
Confidence 7766543221 1222222 22 333458899999999999999765 55554433211 112333
Q ss_pred EEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 255 MIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 255 ~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+.. ..+++|++-| +..|.||....
T Consensus 362 ~~~~~~~ktyfFkG--------------~~ywryd~~~~ 386 (460)
T 1qhu_A 362 FVCPGSSRLHIMAG--------------RRLWWLDLKSG 386 (460)
T ss_dssp ECCTTCCEEEEEET--------------TEEEEEEGGGG
T ss_pred EEeCCCCEEEEEEC--------------CEEEEEECCCC
Confidence 332 3589999977 25677777654
No 46
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.24 E-value=0.3 Score=46.23 Aligned_cols=66 Identities=17% Similarity=0.127 Sum_probs=45.2
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCc--EEeccCC-----ccCCcEEEEcCeEEEEeC-------cEEEEecCCc----
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYG-----WLQGPMAIVHDSVYLMSH-------GLIIKQHRDV---- 237 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~-----~~~~~~~~~~~~ly~~g~-------~~~~~yd~~~---- 237 (317)
.++.+++||+... ...+.++|..+++ |+.-... ....+.++.++++|+... +.++.||.++
T Consensus 111 ~~~~~~~v~v~~~-dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 111 LAYGAGQIVKKQA-NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp CEEETTEEEEECT-TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred cEEECCEEEEEeC-CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 4567999998754 4579999998774 8754321 112233456899988753 6899999865
Q ss_pred eEEEe
Q 021080 238 RKVVA 242 (317)
Q Consensus 238 W~~v~ 242 (317)
|+.-.
T Consensus 190 W~~~~ 194 (571)
T 2ad6_A 190 WRAFA 194 (571)
T ss_dssp EEEES
T ss_pred EEEcc
Confidence 97644
No 47
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.13 E-value=0.074 Score=51.39 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=75.4
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCcc-----------CCcEEEEcCeEEEEe-CcEEEEecCCc---
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL-----------QGPMAIVHDSVYLMS-HGLIIKQHRDV--- 237 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~-----------~~~~~~~~~~ly~~g-~~~~~~yd~~~--- 237 (317)
+-++.+++||+... ...+.++|..+++ |+.-..... ....++.++++|+.. .+.++.+|.++
T Consensus 61 ~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~ 139 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKA 139 (668)
T ss_dssp CCEEETTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEECCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCE
Confidence 34678999999866 4579999988775 986543221 123466789999887 47899999765
Q ss_pred -eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 238 -RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 238 -W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
|+.-..-+........+.+..+++||+-.+.... .....+..||.++++..|+.-
T Consensus 140 ~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 140 IWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY-------GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred eeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc-------CCCCEEEEEECCCCcEEEEec
Confidence 9875432211111222334568888874332111 123478999999997789753
No 48
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.12 E-value=0.096 Score=49.61 Aligned_cols=118 Identities=12% Similarity=0.068 Sum_probs=74.5
Q ss_pred EEEEECCEEEEEecCceeEEEEeC-CCCc--EEeccCCcc-----------CCcEEEEcCeEEEEeC-cEEEEecCCc--
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDH-MGLG--WTVEDYGWL-----------QGPMAIVHDSVYLMSH-GLIIKQHRDV-- 237 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~-~~~~--W~~~~~~~~-----------~~~~~~~~~~ly~~g~-~~~~~yd~~~-- 237 (317)
+-++.+++||+.......++++|. .+++ |+....... ....++.++++|+... +.++++|.++
T Consensus 57 ~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGK 136 (571)
T ss_dssp CCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCC
T ss_pred ccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCC
Confidence 345789999998653457999999 7765 986543211 1234667899999864 7899999765
Q ss_pred --eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 238 --RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 238 --W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
|+.-..-+........+.+..+++||+-.+..+.+ ....+..||.++++..|+.-
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~-------~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG-------VRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT-------CCCEEEEEETTTCCEEEEEE
T ss_pred EEEEecCCCCCccceeccCCEEECCEEEEEecCCccC-------CCCEEEEEECCCCcEEEEEc
Confidence 98643221100111122345688888754322211 23478999999987789753
No 49
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.12 E-value=0.5 Score=39.53 Aligned_cols=98 Identities=7% Similarity=-0.016 Sum_probs=55.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCC---ccCCcEEE-EcCeEEEEeC--c-EEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG---WLQGPMAI-VHDSVYLMSH--G-LIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~---~~~~~~~~-~~~~ly~~g~--~-~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
+|++|+.......+..||+.......+... ..+..++. -+|.+|+.+. + .+..|+++. -..+..... ..
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~-~~- 251 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK-HA- 251 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC-CS-
T ss_pred CCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC-CC-
Confidence 589999876567899999876654444321 11122222 2678999874 4 899999765 222221110 11
Q ss_pred ccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 IGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 ~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...+++. -+++||+... . +.|.+|++...
T Consensus 252 ~~~~i~~~~~g~l~vs~~---~----------~~v~v~~~~~~ 281 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLASK---D----------YRLYIYRYVQL 281 (286)
T ss_dssp CEEEEEEETTTEEEEEET---T----------TEEEEEECSCC
T ss_pred cceeEEECCCCcEEEECC---C----------CeEEEEEcccc
Confidence 1123333 3678888742 1 26777777543
No 50
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.11 E-value=0.53 Score=39.77 Aligned_cols=106 Identities=15% Similarity=0.018 Sum_probs=61.4
Q ss_pred EEECCEEEEEecC-ceeEEEEeCCCCc-EEec-cCC------ccCCcEEEEcCeEEEEeC--cEEEEecCCc---eEEEe
Q 021080 177 VVIGGKVHVLHKG-LSTVQVLDHMGLG-WTVE-DYG------WLQGPMAIVHDSVYLMSH--GLIIKQHRDV---RKVVA 242 (317)
Q Consensus 177 ~~~~g~lyv~gG~-~~~v~~yd~~~~~-W~~~-~~~------~~~~~~~~~~~~ly~~g~--~~~~~yd~~~---W~~v~ 242 (317)
..-+|++++.... ...++.+|+..+. |+.. ... .+.......+|.+++... +.+..||++. |+.-.
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC
T ss_pred ECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEEC
Confidence 3457777777654 6778889985442 4422 110 111122334666666653 7899999865 87643
Q ss_pred ccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 243 SASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 243 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
... .....+..+|.+++.+... ..|..+|+++++..|+.-
T Consensus 164 ~~~-----~~~~~~~~~g~~~v~~~~~------------~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 164 SGT-----PFSSAFLDNGDCLVACGDA------------HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp SSC-----CCEEEECTTSCEEEECBTT------------SEEEEECTTTCCEEEEEE
T ss_pred CCC-----ccceeEcCCCCEEEEeCCC------------CeEEEEeCcCCcEEEEec
Confidence 211 1122333367788776421 257889999776678764
No 51
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.02 E-value=0.5 Score=45.75 Aligned_cols=65 Identities=18% Similarity=0.226 Sum_probs=44.8
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCc--EEeccC-C-----ccCCcEEEEcCeEEEEeC-------cEEEEecCCc---
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDY-G-----WLQGPMAIVHDSVYLMSH-------GLIIKQHRDV--- 237 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~-~-----~~~~~~~~~~~~ly~~g~-------~~~~~yd~~~--- 237 (317)
.++.+++||+... ...+.++|..+++ |+.... . ....+.++.++.+|+-.. +.++.||.++
T Consensus 117 ~~~~~g~v~v~~~-dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 117 VAVWKGKVYVGVL-DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp CEEETTEEEEECT-TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred cEEECCEEEEEcc-CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 4578899988754 4679999998775 886543 1 112233557888888642 5799999765
Q ss_pred -eEEE
Q 021080 238 -RKVV 241 (317)
Q Consensus 238 -W~~v 241 (317)
|+.-
T Consensus 196 ~W~~~ 200 (689)
T 1yiq_A 196 AWRFY 200 (689)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 9864
No 52
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=95.96 E-value=0.003 Score=55.29 Aligned_cols=41 Identities=17% Similarity=0.193 Sum_probs=37.0
Q ss_pred CcCCCCcHHHHHHHhccCCCCchhhhhhcCHhHHHhhcChh
Q 021080 3 ELIEGLPDAVALRCLARVPFFLHPKLELVSRSWRAAIRSPE 43 (317)
Q Consensus 3 ~~~~~Lp~d~~~~~l~r~p~~~~~~~~~v~k~w~~l~~s~~ 43 (317)
..|..||+|++.+|+.+++..+..+++.|||+|+.+..++.
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 45789999999999999999999999999999999976554
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.93 E-value=0.65 Score=41.26 Aligned_cols=180 Identities=11% Similarity=0.022 Sum_probs=93.3
Q ss_pred ceEEEeCCCCCEeecCCCCccccccCCeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCC
Q 021080 68 LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKS 146 (317)
Q Consensus 68 ~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~ 146 (317)
.++.+|+.++.+..+..++.. ....+++.. ++.+++.++..
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~----------------------------------- 143 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG---FQPKSVRFIDNTRLAIPLLED----------------------------------- 143 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS---SCBCCCEESSSSEEEEEBTTS-----------------------------------
T ss_pred EEEEECCCCCcceEEEEEcCC---CCceEEEEeCCCeEEEEeCCC-----------------------------------
Confidence 677888877766554433322 111122222 67788777642
Q ss_pred CceeEEeeCCCCceeeCCCCCc--cCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEE-eccCCcc-CCcEEEE--
Q 021080 147 ISQAEMYDPEKDVWVPIPDLHR--THNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWL-QGPMAIV-- 218 (317)
Q Consensus 147 ~~~~~~yd~~t~~W~~~~~~p~--~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~-~~~~~~~-- 218 (317)
..+.+||..+++.....+... ........+.+ ++++++.++....+..||+.+.+-. .+..... ...++..
T Consensus 144 -~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (433)
T 3bws_A 144 -EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI 222 (433)
T ss_dssp -SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT
T ss_pred -CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC
Confidence 346677877776654333211 10112223333 7889998886678999999876532 2221111 1122222
Q ss_pred cCeEEEEeC--cEEEEecCCceEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 219 HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 219 ~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
++.+|+.+. +.++.||..+-+.+..++. ...-..++.. +++.+++++.....-. ..-..|.+||+.++
T Consensus 223 ~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~----~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 223 RDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQE----SGGGRLGIYSMDKE 293 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTC----SCCEEEEEEETTTT
T ss_pred CCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccc----cCCCeEEEEECCCC
Confidence 345777763 7899999877444433332 1111222222 4545555543322100 01236888998876
No 54
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.84 E-value=0.49 Score=42.44 Aligned_cols=131 Identities=13% Similarity=0.043 Sum_probs=68.5
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEe-ccCCccCCcEEEEcCeEEEEe
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQGPMAIVHDSVYLMS 226 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~ly~~g 226 (317)
..+.+||..+.+-...............++..+++..+.|+....+..||..+.+-.. +............++.+++.+
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g 312 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSG 312 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEE
Confidence 4677788776542211011111022223444577777777767789999998775321 211111222333456555555
Q ss_pred C--cEEEEecCCceEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 227 H--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 227 ~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+ +.+..||..+.+.+..+.. .......+..++..++.|+.++ .|.+||+.+.
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~l~sg~~dg------------~i~vwd~~~~ 366 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEG--HEELVRCIRFDNKRIVSGAYDG------------KIKVWDLVAA 366 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECC--CSSCEEEEECCSSEEEEEETTS------------CEEEEEHHHH
T ss_pred eCCCeEEEEECCCCCEEEEEeC--CcCcEEEEEecCCEEEEEeCCC------------cEEEEECCCC
Confidence 4 6889999877444443331 1111223444777777776432 4667776543
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.81 E-value=0.87 Score=40.85 Aligned_cols=134 Identities=12% Similarity=0.078 Sum_probs=70.4
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEE-eccCCc-c--CCcEEEEcCeEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGW-L--QGPMAIVHDSVY 223 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~-~--~~~~~~~~~~ly 223 (317)
..+.+||..+.+-... +... .........++.+++.|+....+..||..+.+-. .+.... . .......++.++
T Consensus 299 ~~i~i~d~~~~~~~~~--~~~~-~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 375 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHT--LTGH-QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 375 (445)
T ss_dssp SCEEEEETTTCCEEEE--ECCC-CSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEE
T ss_pred CeEEEEECCCCCEEEE--EcCC-cccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEE
Confidence 4677888877653321 1111 2222344456666777776678999999776532 222111 1 122233456655
Q ss_pred EEeC--cEEEEecCCceEEEeccc----cccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 224 LMSH--GLIIKQHRDVRKVVASAS----EFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 224 ~~g~--~~~~~yd~~~W~~v~~~~----~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+.++ +.+..||.+.-+.+..+. ......-..+... ++.+++.|+.++.. ...+.+||.+.+
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~--------~~~l~v~df~~~ 443 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE--------ETKLLVLDFDVD 443 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS--------CCEEEEEECCCC
T ss_pred EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCC--------ccEEEEEECCCC
Confidence 5554 789999987644443331 0011111222222 45666777766542 236788888764
No 56
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.80 E-value=0.7 Score=38.60 Aligned_cols=100 Identities=7% Similarity=0.087 Sum_probs=56.4
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCC---ccCCcEEEE-cCeEEEEeC--cEEEEecCCc--eEEEeccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG---WLQGPMAIV-HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRI 251 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~---~~~~~~~~~-~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r~ 251 (317)
+|++|+.......+..||+.......+... ..+..++.- ++++|+.+. +.++.|+++. -..+..-. ....
T Consensus 131 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g--~~~~ 208 (286)
T 1q7f_A 131 KGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEG--ITNY 208 (286)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTT--TSCS
T ss_pred CCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCC--ccCC
Confidence 678999876567899999876654444311 111222222 578999874 7899999765 23332211 0011
Q ss_pred cEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 GFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..+++.. +|+||+....+. ..|.+||++..
T Consensus 209 p~~i~~d~~G~l~v~~~~~~-----------~~i~~~~~~g~ 239 (286)
T 1q7f_A 209 PIGVGINSNGEILIADNHNN-----------FNLTIFTQDGQ 239 (286)
T ss_dssp EEEEEECTTCCEEEEECSSS-----------CEEEEECTTSC
T ss_pred CcEEEECCCCCEEEEeCCCC-----------EEEEEECCCCC
Confidence 2233332 578888764221 15777886543
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.75 E-value=0.86 Score=39.28 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=32.1
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEE--C--CEEEEEecCceeEEEEeCCCC
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~--g~lyv~gG~~~~v~~yd~~~~ 201 (317)
.+.+||..+++|..+..+... ......+.+ + +.+++.|+....+..||..+.
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEEEEEcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 466778778777665444322 222233332 3 567777776778999998776
No 58
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.73 E-value=0.12 Score=49.91 Aligned_cols=117 Identities=17% Similarity=0.114 Sum_probs=75.6
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCcc-----------CCcEEEEcCeEEEEeC-cEEEEecCCc---
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL-----------QGPMAIVHDSVYLMSH-GLIIKQHRDV--- 237 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~-----------~~~~~~~~~~ly~~g~-~~~~~yd~~~--- 237 (317)
+-++.+++||+... ...++++|..+++ |+.-..... ....++.++++|+... +.++.+|.++
T Consensus 72 ~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~ 150 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKE 150 (677)
T ss_dssp CCEEETTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEECCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCE
Confidence 34678999999865 4679999998775 986543221 2345667889998864 7899999765
Q ss_pred -eEEEec-cccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 238 -RKVVAS-ASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 238 -W~~v~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
|+.-.. -+........+.+..+++||+..+..+. .....+..||.++++..|+.-
T Consensus 151 ~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 151 VWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY-------GVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred EeeecCCcCcCcCcccccCcEEECCEEEEEeccccc-------CCCCEEEEEECCCCcEEEEec
Confidence 987533 1100011122334568888875442221 123478999999997789754
No 59
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.72 E-value=0.13 Score=49.96 Aligned_cols=117 Identities=16% Similarity=0.121 Sum_probs=74.9
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCcc-----------CCcEEEEcCeEEEEe-CcEEEEecCCc---
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL-----------QGPMAIVHDSVYLMS-HGLIIKQHRDV--- 237 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~-----------~~~~~~~~~~ly~~g-~~~~~~yd~~~--- 237 (317)
+-++.+++||+.+. ...+.++|..+++ |+.-..... ....++.++++|+.. .+.++.+|.++
T Consensus 65 ~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~ 143 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQR 143 (689)
T ss_dssp CCEEETTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCE
T ss_pred cCEEECCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCE
Confidence 34578999999865 4569999998775 986543221 123466788999887 47899999765
Q ss_pred -eEEEec-cccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 238 -RKVVAS-ASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 238 -W~~v~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
|+.-.. -+........+-+..+++||+-.+.... .....+..||.++++..|+.-
T Consensus 144 ~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 144 AWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF-------GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred eeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc-------CCCCEEEEEECCCCcEEEEec
Confidence 987543 1110111222335568888874322111 123478999999997779753
No 60
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.71 E-value=0.58 Score=44.30 Aligned_cols=64 Identities=20% Similarity=0.197 Sum_probs=42.3
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCc-----cCCcEEEEcC------eEEEEe-------CcEEEEecC
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGW-----LQGPMAIVHD------SVYLMS-------HGLIIKQHR 235 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~-----~~~~~~~~~~------~ly~~g-------~~~~~~yd~ 235 (317)
.++.+++||+... ...+.++|..+++ |+...... ...+-++.++ .+|+-. .+.++.||.
T Consensus 113 ~a~~~~~v~~~t~-dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~ 191 (582)
T 1flg_A 113 AAIYGDKVFFGTL-DASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDP 191 (582)
T ss_dssp CEEETTEEEEEET-TTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECT
T ss_pred cEEECCEEEEEeC-CCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEEC
Confidence 4568999998654 4579999998775 88543221 1223344566 777643 268999998
Q ss_pred Cc----eEE
Q 021080 236 DV----RKV 240 (317)
Q Consensus 236 ~~----W~~ 240 (317)
++ |+.
T Consensus 192 ~tG~~~W~~ 200 (582)
T 1flg_A 192 DTGEEIWMR 200 (582)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEeec
Confidence 65 965
No 61
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.67 E-value=0.74 Score=39.02 Aligned_cols=139 Identities=9% Similarity=-0.110 Sum_probs=68.4
Q ss_pred eeEEeeCCCCceeeCCCCCccC-CCceEEEE--ECCEEEEEec-----------CceeEEEEeCCCCcEEeccCCcc-CC
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTH-NSACTGVV--IGGKVHVLHK-----------GLSTVQVLDHMGLGWTVEDYGWL-QG 213 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~-r~~~~~~~--~~g~lyv~gG-----------~~~~v~~yd~~~~~W~~~~~~~~-~~ 213 (317)
.+.+||+++++++.+....... ......+. -+|++|+..- ....++.+|+.. +...+..... +.
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~pn 152 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDISN 152 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBEE
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccccc
Confidence 5667888888776653322110 11122232 3678887531 124688888753 3332211111 12
Q ss_pred cEEEE-cC-eEEEEeC--cEEEEecC--Cc--eE---EEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccC
Q 021080 214 PMAIV-HD-SVYLMSH--GLIIKQHR--DV--RK---VVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPM 281 (317)
Q Consensus 214 ~~~~~-~~-~ly~~g~--~~~~~yd~--~~--W~---~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~ 281 (317)
..+.. ++ .+|+.+. +.++.|+. +. .. .+..++. ....-.+++.. +|+||+..-. .
T Consensus 153 gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~------------~ 219 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYN------------G 219 (297)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEET------------T
T ss_pred ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcC------------C
Confidence 22322 33 5888874 67888864 22 21 1222221 01112234443 6788876421 1
Q ss_pred cceeEeecCCCCCceeecccCC
Q 021080 282 SDVDVLTVGAERPTWRQVSPMT 303 (317)
Q Consensus 282 ~~v~~yd~~~~~~~W~~~~~~p 303 (317)
..|.+||++++ +-...-++|
T Consensus 220 ~~v~~~d~~tG--~~~~~i~~p 239 (297)
T 3g4e_A 220 GRVIRLDPVTG--KRLQTVKLP 239 (297)
T ss_dssp TEEEEECTTTC--CEEEEEECS
T ss_pred CEEEEEcCCCc--eEEEEEECC
Confidence 25889999877 543333344
No 62
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.65 E-value=0.72 Score=44.43 Aligned_cols=65 Identities=18% Similarity=0.195 Sum_probs=44.6
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCc-----cCCcEEEEcCeEEEEeC-------cEEEEecCCc----
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGW-----LQGPMAIVHDSVYLMSH-------GLIIKQHRDV---- 237 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~-----~~~~~~~~~~~ly~~g~-------~~~~~yd~~~---- 237 (317)
.++.+++||+... ...+.++|..+++ |+...... ...+.++.++.+|+... +.++.||.++
T Consensus 113 ~~~~~~~v~v~~~-dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 113 VALWGDKVYVGTL-DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp CEEEBTEEEEECT-TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred eEEECCEEEEEcC-CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 4567899988654 4679999998775 88654211 12333557888887642 5799999865
Q ss_pred eEEE
Q 021080 238 RKVV 241 (317)
Q Consensus 238 W~~v 241 (317)
|+.-
T Consensus 192 W~~~ 195 (668)
T 1kv9_A 192 WRFY 195 (668)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9864
No 63
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.61 E-value=0.47 Score=45.15 Aligned_cols=120 Identities=18% Similarity=0.074 Sum_probs=69.3
Q ss_pred ECCE----EEEEecCceeEEEEeCCCCc--EEeccCC-----ccCCcEEEEcCeEEEEe-------CcEEEEecCCc---
Q 021080 179 IGGK----VHVLHKGLSTVQVLDHMGLG--WTVEDYG-----WLQGPMAIVHDSVYLMS-------HGLIIKQHRDV--- 237 (317)
Q Consensus 179 ~~g~----lyv~gG~~~~v~~yd~~~~~--W~~~~~~-----~~~~~~~~~~~~ly~~g-------~~~~~~yd~~~--- 237 (317)
.+++ ||+... ...+.++|..+++ |+.-... ....+-++.++++|+-. .+.++.||.++
T Consensus 116 ~~g~~~~rV~v~t~-dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 116 GDGKTPALILKTQL-DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp CCSSSCCEEEEECT-TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred cCCcceeEEEEEcC-CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcE
Confidence 5777 888644 4579999998775 8854321 11223345789988765 26899999875
Q ss_pred -eEEEecccccc-----------------------------cc-----c-cEEEEEECCeEEEEeCcccCCC---Cceec
Q 021080 238 -RKVVASASEFR-----------------------------RR-----I-GFAMIGMGDDIYVIGGVIGPDR---WNWDI 278 (317)
Q Consensus 238 -W~~v~~~~~~~-----------------------------~r-----~-~~~~~~~~~~lyv~GG~~~~~~---~~~~~ 278 (317)
|+.-..-+... .+ + ..+.-.-.+.||+-.|....-. ...+.
T Consensus 195 ~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~ 274 (599)
T 1w6s_A 195 VWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDN 274 (599)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCc
Confidence 98654332100 00 0 0111123567787655421100 00001
Q ss_pred ccCcceeEeecCCCCCceeec
Q 021080 279 KPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 279 ~~~~~v~~yd~~~~~~~W~~~ 299 (317)
.+...+..+|+++++..|+.-
T Consensus 275 ~y~~sv~Ald~~TG~~~W~~q 295 (599)
T 1w6s_A 275 KWTMTIFGRDADTGEAKFGYQ 295 (599)
T ss_dssp TTSSEEEEEETTTCCEEEEEE
T ss_pred cccceEEEEeCCCCceeeEee
Confidence 245679999999998889754
No 64
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.29 E-value=0.21 Score=47.62 Aligned_cols=118 Identities=13% Similarity=0.077 Sum_probs=73.2
Q ss_pred EEEEECCEEEEEecCceeEEEEeC-CCCc--EEeccCCcc-----------CCcEEE--EcCe----EEEEeC-cEEEEe
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDH-MGLG--WTVEDYGWL-----------QGPMAI--VHDS----VYLMSH-GLIIKQ 233 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~-~~~~--W~~~~~~~~-----------~~~~~~--~~~~----ly~~g~-~~~~~y 233 (317)
+-++.+++||+.+.....++++|. .+++ |+.-..... ....++ .+++ +|+... +.++++
T Consensus 57 tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~Al 136 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAAL 136 (599)
T ss_dssp CCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEE
T ss_pred ccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEE
Confidence 456779999998653457999999 7775 987543321 123344 5777 988864 789999
Q ss_pred cCCc----eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 234 HRDV----RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 234 d~~~----W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
|.++ |+.-..-+........+-+..+++||+-.+..+. .....+..||.++++..|+.-
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-------g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL-------GVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG-------TCCCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc-------CCCCeEEEEECCCCcEEEEEc
Confidence 9765 9864322110001112234568888764432211 123478999999987789754
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.21 E-value=1.5 Score=38.68 Aligned_cols=107 Identities=8% Similarity=-0.063 Sum_probs=56.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEE---cCeEEEEeC----cEEEEecCCceEEEeccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIV---HDSVYLMSH----GLIIKQHRDVRKVVASASEFRRRI 251 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~---~~~ly~~g~----~~~~~yd~~~W~~v~~~~~~~~r~ 251 (317)
++.+++.|+....+..||..+..-. .+............ +..+++.++ +.+..||..+.+.+..+.. ...
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~ 305 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--GSQ 305 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC--SSC
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC--CCc
Confidence 6777777776678999999876422 12111111222222 345666653 6888999876444433331 111
Q ss_pred cEEEEEE-CCe-EEEEeCcccCCCCceecccCcceeEeecCCCCCceeeccc
Q 021080 252 GFAMIGM-GDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSP 301 (317)
Q Consensus 252 ~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~ 301 (317)
-..+... +++ +++.+|..+. .+.+||..+. +...+..
T Consensus 306 v~~~~~s~~~~~l~~~~g~~dg-----------~i~v~~~~~~--~~~~~~~ 344 (401)
T 4aez_A 306 VTSLIWSPHSKEIMSTHGFPDN-----------NLSIWSYSSS--GLTKQVD 344 (401)
T ss_dssp EEEEEECSSSSEEEEEECTTTC-----------EEEEEEEETT--EEEEEEE
T ss_pred EEEEEECCCCCeEEEEeecCCC-----------cEEEEecCCc--cceeEEE
Confidence 1122222 344 4444453322 6788888876 5555433
No 66
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.19 E-value=0.31 Score=46.23 Aligned_cols=116 Identities=14% Similarity=0.047 Sum_probs=70.6
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCcc---------CCcEEEEcCeEEEEe-CcEEEEecCCc----e
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL---------QGPMAIVHDSVYLMS-HGLIIKQHRDV----R 238 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~---------~~~~~~~~~~ly~~g-~~~~~~yd~~~----W 238 (317)
+.++.+++||+..... .+.++|..+++ |+.-..... ....++.++++|+.. .+.++++|.++ |
T Consensus 63 ~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W 141 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVW 141 (582)
T ss_dssp CCEEETTEEEEEETTT-EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEE
T ss_pred ccEEECCEEEEEcCCC-CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEe
Confidence 4467899999987633 39999998775 986543321 133456789999876 47899999865 9
Q ss_pred EEEeccccccccccEEEEEECC------eEEEEeCcccCCCCceecccCcceeEeecCCCCCceee
Q 021080 239 KVVASASEFRRRIGFAMIGMGD------DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQ 298 (317)
Q Consensus 239 ~~v~~~~~~~~r~~~~~~~~~~------~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~ 298 (317)
+.-...+........+-+..++ .||+ |...... .....+..||.++++..|+.
T Consensus 142 ~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~------~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 142 KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEF------GVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGG------CCBCEEEEECTTTCCEEEEE
T ss_pred eecCCCCCcCcccccCCEEeCCCcCCcEEEEE-ecccccc------CCCCEEEEEECCCCCEEeec
Confidence 8643322100001112233445 5554 3321110 12347899999998778964
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.18 E-value=1.6 Score=39.10 Aligned_cols=92 Identities=11% Similarity=0.013 Sum_probs=49.4
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc--CCcEEEEcCeEEEEe
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL--QGPMAIVHDSVYLMS 226 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~--~~~~~~~~~~ly~~g 226 (317)
.+.+||..+.+-.. .+... ......+..++...+.|+....+..||+.+..-........ .......++.+.+.+
T Consensus 333 ~i~vwd~~~~~~~~--~~~~h-~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (464)
T 3v7d_B 333 TIRIWDLENGELMY--TLQGH-TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG 409 (464)
T ss_dssp CEEEEETTTTEEEE--EECCC-SSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEE
T ss_pred cEEEEECCCCcEEE--EEeCC-CCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEe
Confidence 45566666554221 11111 22334555667777777767789999998765221111111 112223355555554
Q ss_pred -CcEEEEecCCceEEEec
Q 021080 227 -HGLIIKQHRDVRKVVAS 243 (317)
Q Consensus 227 -~~~~~~yd~~~W~~v~~ 243 (317)
.+.+..||.++-+.+..
T Consensus 410 ~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 410 SENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp ETTEEEEEETTTCCEEES
T ss_pred cCCeEEEEECCCCcEEeh
Confidence 47899999887555543
No 68
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.14 E-value=0.32 Score=41.58 Aligned_cols=132 Identities=11% Similarity=0.067 Sum_probs=66.9
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEE-ECC-EEEEEecCcee-EEEEeCCCCc-E-----EeccCCccCCcEEEE-
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVV-IGG-KVHVLHKGLST-VQVLDHMGLG-W-----TVEDYGWLQGPMAIV- 218 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~-~~g-~lyv~gG~~~~-v~~yd~~~~~-W-----~~~~~~~~~~~~~~~- 218 (317)
.+.+||..+++-... ++.. ...+..+. -+| .+|+.+..... +..|+...+. . ..++....+..++..
T Consensus 109 ~i~v~d~~~~~~~~~--~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 109 NMQSYSFLKNKFIST--IPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp EEEEEETTTTEEEEE--EECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred cEEEEECCCCCeEEE--EECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 788899888765443 2222 22222333 245 48887664445 7777765432 1 111111111122221
Q ss_pred cC-eEEEEeC--cEEEEecCCceEE---EeccccccccccEEEEEE-CCe-EEEEeCcccCCCCceecccCcceeEeecC
Q 021080 219 HD-SVYLMSH--GLIIKQHRDVRKV---VASASEFRRRIGFAMIGM-GDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVG 290 (317)
Q Consensus 219 ~~-~ly~~g~--~~~~~yd~~~W~~---v~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~~v~~yd~~ 290 (317)
++ .+|+.+. +.+..||.+..+. +..++. ......++.. +++ ||+.... .+.+.+||++
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~------------~~~i~~~d~~ 251 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENITLLNAVGT--NNLPGTIVVSRDGSTVYVLTES------------TVDVFNFNQL 251 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--SSCCCCEEECTTSSEEEEECSS------------EEEEEEEETT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--CCCCceEEECCCCCEEEEEEcC------------CCEEEEEECC
Confidence 44 4787764 7899999876333 544442 1111222222 444 6665441 1257889998
Q ss_pred CCCCceeec
Q 021080 291 AERPTWRQV 299 (317)
Q Consensus 291 ~~~~~W~~~ 299 (317)
++ +.+.+
T Consensus 252 ~~--~~~~~ 258 (331)
T 3u4y_A 252 SG--TLSFV 258 (331)
T ss_dssp TT--EEEEE
T ss_pred CC--ceeee
Confidence 87 65444
No 69
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.08 E-value=0.84 Score=38.78 Aligned_cols=110 Identities=10% Similarity=-0.051 Sum_probs=57.5
Q ss_pred CC-EEEEEecCceeEEEEeCC--CCcEEec---cCCccC------C-cEEEE-cC-eEEEEeC--cEEEEecCC----ce
Q 021080 180 GG-KVHVLHKGLSTVQVLDHM--GLGWTVE---DYGWLQ------G-PMAIV-HD-SVYLMSH--GLIIKQHRD----VR 238 (317)
Q Consensus 180 ~g-~lyv~gG~~~~v~~yd~~--~~~W~~~---~~~~~~------~-~~~~~-~~-~ly~~g~--~~~~~yd~~----~W 238 (317)
++ .+|+.+.....+..||.. +..+... ...+.. . .++.. ++ .+|+... +.+..|+.+ ++
T Consensus 188 dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 188 NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL 267 (343)
T ss_dssp TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCce
Confidence 44 477777556678888884 3444322 211111 0 12222 23 5776653 678888765 37
Q ss_pred EEEeccccccccccEEEEEE-CC-eEEEEeCcccCCCCceecccCcceeEe--ecCCCCCceeecccCCCC
Q 021080 239 KVVASASEFRRRIGFAMIGM-GD-DIYVIGGVIGPDRWNWDIKPMSDVDVL--TVGAERPTWRQVSPMTRC 305 (317)
Q Consensus 239 ~~v~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~v~~y--d~~~~~~~W~~~~~~p~~ 305 (317)
+.+...+.... ...++.. ++ .||+.++.+ +.+.+| |++++ +++.+..++..
T Consensus 268 ~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~------------~~v~v~~~d~~~g--~~~~~~~~~~g 322 (343)
T 1ri6_A 268 SKEGFQPTETQ--PRGFNVDHSGKYLIAAGQKS------------HHISVYEIVGEQG--LLHEKGRYAVG 322 (343)
T ss_dssp EEEEEEECSSS--CCCEEECTTSSEEEEECTTT------------CEEEEEEEETTTT--EEEEEEEEECS
T ss_pred EEeeeecCCCc--cceEEECCCCCEEEEecCCC------------CeEEEEEEcCCCc--eeeEccccccC
Confidence 76665552111 1122222 34 466554321 144455 77777 88888776654
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.02 E-value=1.4 Score=37.21 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=52.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEec-c-CCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEecccccc-c-cc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVE-D-YGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFR-R-RI 251 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~-~-~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~-~-r~ 251 (317)
++++++.|+....+..||..+.+-... . ........... +++.++.++ +.+..||..+-+.+..+.... . ..
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 239 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC 239 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSC
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEE
Confidence 567777777667899999987753321 1 11011111122 344444443 788888887643333222101 1 11
Q ss_pred cEEEE-EECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 GFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 ~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..... ..++.+++.|+.+ ..|.+||++++
T Consensus 240 ~~~~~~~~~~~~l~sg~~d------------g~i~vwd~~~~ 269 (312)
T 4ery_A 240 IFANFSVTGGKWIVSGSED------------NLVYIWNLQTK 269 (312)
T ss_dssp CCEEEECSSSCEEEECCTT------------SCEEEEETTTC
T ss_pred EEEEEEeCCCcEEEEECCC------------CEEEEEECCCc
Confidence 11122 2356666666633 25778888776
No 71
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=94.81 E-value=0.0092 Score=56.48 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=28.9
Q ss_pred CCcCCCCcHHHHHHHhccCC-CCchhhhhhcCHhHHHh
Q 021080 2 SELIEGLPDAVALRCLARVP-FFLHPKLELVSRSWRAA 38 (317)
Q Consensus 2 ~~~~~~Lp~d~~~~~l~r~p-~~~~~~~~~v~k~w~~l 38 (317)
.+.|+.||+|++.+||+++| .++..+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 36788999999999999999 88999999999999987
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.79 E-value=1.4 Score=37.21 Aligned_cols=99 Identities=8% Similarity=-0.199 Sum_probs=51.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEeccccccccccEEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAM 255 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~ 255 (317)
+++.++.++....+..||+.+.+-...-........... ++++++++. +.+..||....+...... ....-..+
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~~v~~~ 271 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL--HESCVLSL 271 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC--CSSCEEEE
T ss_pred CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC--CccceeEE
Confidence 666777777667899999987753222111111111122 455555543 678888876632221111 11111122
Q ss_pred EEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 256 IGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 256 ~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
... ++++++.++.+ ..+.+||.+++
T Consensus 272 ~~~~~~~~l~~~~~d------------g~i~~~~~~~~ 297 (337)
T 1gxr_A 272 KFAYCGKWFVSTGKD------------NLLNAWRTPYG 297 (337)
T ss_dssp EECTTSSEEEEEETT------------SEEEEEETTTC
T ss_pred EECCCCCEEEEecCC------------CcEEEEECCCC
Confidence 222 46666666532 25778888776
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.51 E-value=1.1 Score=38.58 Aligned_cols=130 Identities=14% Similarity=0.085 Sum_probs=65.0
Q ss_pred CCceEEEeCCCCCEeecCCCCccccccCC-eeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCC
Q 021080 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAH-FGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSC 143 (317)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~p~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~ 143 (317)
...+..||..++++..+..+... ... .++... ++..++.|+.+
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~~~~~d-------------------------------- 73 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEH---NGQVTGVDWAPDSNRIVTCGTD-------------------------------- 73 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECC---SSCEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred CCEEEEEeCCCCcEEeeeeecCC---CCcccEEEEeCCCCEEEEEcCC--------------------------------
Confidence 46888999988876554443321 111 222222 45666666642
Q ss_pred cCCCceeEEeeCCCCceeeCCCCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCc-EEeccCCcc----CCcEE
Q 021080 144 RKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLG-WTVEDYGWL----QGPMA 216 (317)
Q Consensus 144 ~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~-W~~~~~~~~----~~~~~ 216 (317)
..+.+||..++++.....+... ......+. -++++++.|+....+..||..+.. |........ .....
T Consensus 74 ----g~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 74 ----RNAYVWTLKGRTWKPTLVILRI-NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp ----SCEEEEEEETTEEEEEEECCCC-SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred ----CeEEEEECCCCeeeeeEEeecC-CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 3456677777766544222211 11222222 256667777655667777776554 332221111 11111
Q ss_pred EE--cCeEEEEeC--cEEEEecC
Q 021080 217 IV--HDSVYLMSH--GLIIKQHR 235 (317)
Q Consensus 217 ~~--~~~ly~~g~--~~~~~yd~ 235 (317)
.. ++.+++.++ +.+..||.
T Consensus 149 ~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 149 DWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC
T ss_pred EEcCCCCEEEEEcCCCCEEEEEc
Confidence 22 455555543 67777774
No 74
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.48 E-value=0.6 Score=39.79 Aligned_cols=115 Identities=8% Similarity=-0.072 Sum_probs=61.8
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE-ECC-EEEEEecCceeEEEEeCCCCcE--EeccCCccCCc-EEEE-cC-
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-IGG-KVHVLHKGLSTVQVLDHMGLGW--TVEDYGWLQGP-MAIV-HD- 220 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~-~~g-~lyv~gG~~~~v~~yd~~~~~W--~~~~~~~~~~~-~~~~-~~- 220 (317)
..+.+||+.+++....-..+.. ....++ -+| .+|+.+.....+..+|+.+++- ..+.....+.. ++.. ++
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYD---FVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCC---EEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS
T ss_pred CeEEEEeCcccceeeeEEccCC---cceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC
Confidence 4677888888877554333322 222222 245 4888776567899999988874 22222212223 3332 33
Q ss_pred eEEEEeCc----EEEEecCCceEEEeccccccccccEEEEEE-CC-eEEEEeC
Q 021080 221 SVYLMSHG----LIIKQHRDVRKVVASASEFRRRIGFAMIGM-GD-DIYVIGG 267 (317)
Q Consensus 221 ~ly~~g~~----~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~-~~-~lyv~GG 267 (317)
.+|+..+. .++.+|.++-+.+..++. ......++.. ++ .||+.+.
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEE
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEec
Confidence 56744443 899999877444443432 1111233332 34 4777654
No 75
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.37 E-value=1.9 Score=35.78 Aligned_cols=97 Identities=6% Similarity=-0.065 Sum_probs=55.4
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCcc---CCcEEEE-cCeEEEEe--CcEEEEecCCc-eEEEecccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL---QGPMAIV-HDSVYLMS--HGLIIKQHRDV-RKVVASASEFRRRIG 252 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~-~~~ly~~g--~~~~~~yd~~~-W~~v~~~~~~~~r~~ 252 (317)
+|+||+.......+..||+ +++......... ...++.- +|.+|+.. .+.+..||++. ..... .+. ....-
T Consensus 193 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~-~~~-~~~~~ 269 (299)
T 2z2n_A 193 DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYP-IQI-KSAEP 269 (299)
T ss_dssp TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEE-CSS-SSCCE
T ss_pred CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEe-CCC-CCCcc
Confidence 5789888655568999999 777765432111 1122222 57899986 37899999854 33332 111 01112
Q ss_pred EEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 253 FAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 253 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+++.-++.||+... .+.+.+||++++
T Consensus 270 ~~i~~~~g~l~v~~~-------------~~~l~~~~~~~~ 296 (299)
T 2z2n_A 270 HGICFDGETIWFAME-------------CDKIGKLTLIKD 296 (299)
T ss_dssp EEEEECSSCEEEEET-------------TTEEEEEEEC--
T ss_pred ceEEecCCCEEEEec-------------CCcEEEEEcCcc
Confidence 233335678888653 126778888765
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.36 E-value=2.2 Score=36.58 Aligned_cols=108 Identities=6% Similarity=-0.122 Sum_probs=54.3
Q ss_pred CCEEEEEecCceeEEEEeCCC------------------Cc-EEeccCCccCCcEEEE--cCeEEEEeC--cEEEEecCC
Q 021080 180 GGKVHVLHKGLSTVQVLDHMG------------------LG-WTVEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~------------------~~-W~~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~ 236 (317)
++++++.|+....+..||... .. -..+............ ++..++.++ +.+..||..
T Consensus 153 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 153 NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 566777777667788898542 11 1111110001111222 444444443 678888887
Q ss_pred ceEEEeccccccccccEEEE-EECCeEEEEeCcccCCCCceecccCcceeEeecCC--CCCceeecccCC
Q 021080 237 VRKVVASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA--ERPTWRQVSPMT 303 (317)
Q Consensus 237 ~W~~v~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~--~~~~W~~~~~~p 303 (317)
..+.+..+....... ..+. .-++++++.| . +. .+.+||+.+ + +|..+..+.
T Consensus 233 ~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~-~-d~-----------~i~i~~~~~~~~--~~~~~~~~~ 286 (372)
T 1k8k_C 233 KKMAVATLASETLPL-LAVTFITESSLVAAG-H-DC-----------FPVLFTYDSAAG--KLSFGGRLD 286 (372)
T ss_dssp GTTEEEEEECSSCCE-EEEEEEETTEEEEEE-T-TS-----------SCEEEEEETTTT--EEEECCCCC
T ss_pred CCceeEEEccCCCCe-EEEEEecCCCEEEEE-e-CC-----------eEEEEEccCcCc--eEEEeeccC
Confidence 644443333111111 2222 2356665555 2 11 567888888 7 887775543
No 77
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.33 E-value=2.2 Score=36.47 Aligned_cols=100 Identities=12% Similarity=0.027 Sum_probs=54.8
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEeccccccccccEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFA 254 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~ 254 (317)
++++.+.|+....+..||..+++-. .+............ ++++++.++ +.+..||......+..+.. ....-..
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-h~~~v~~ 253 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-HASWVLN 253 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-CSSCEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-CCCceEE
Confidence 6777777776678999999887532 22211111222222 556666655 6788888876444433331 1111112
Q ss_pred EEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 255 MIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 255 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
++.. +++.++.|+.+ ..|.+||+.+.
T Consensus 254 ~~~sp~~~~l~s~s~D------------~~v~iwd~~~~ 280 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSD------------KSVKVWDVGTR 280 (321)
T ss_dssp EEECTTSSEEEEEETT------------SCEEEEETTTT
T ss_pred EEECCCCCEEEEEeCC------------CcEEEEeCCCC
Confidence 2222 56666766643 25778888765
No 78
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.20 E-value=3.9 Score=39.93 Aligned_cols=132 Identities=8% Similarity=0.110 Sum_probs=73.3
Q ss_pred eeEEeeCCCCceeeCCCC--CccC-CCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccC-----CccCCcE-EE
Q 021080 149 QAEMYDPEKDVWVPIPDL--HRTH-NSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY-----GWLQGPM-AI 217 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~--p~~~-r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~-----~~~~~~~-~~ 217 (317)
.+.+||+.+++|+..... +... ......+.. +|.|++... .-+.+||+.++.+ .... ..+...+ +.
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i 548 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCI 548 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEE
T ss_pred ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEE
Confidence 366788888888876432 1110 111122222 567777543 5689999988888 4321 1111111 11
Q ss_pred ---EcCeEEEEeCcEEEEecCCc--eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCC
Q 021080 218 ---VHDSVYLMSHGLIIKQHRDV--RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 291 (317)
Q Consensus 218 ---~~~~ly~~g~~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~ 291 (317)
-+|.|++...+.++.||+++ ++............-.+++.. +|.|++.+. +.+.+||+++
T Consensus 549 ~~d~~g~lWigT~~Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--------------~Gl~~~~~~~ 614 (795)
T 4a2l_A 549 YEASNGIIWVGTREGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--------------RGISCFNPET 614 (795)
T ss_dssp EECTTSCEEEEESSCEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET--------------TEEEEEETTT
T ss_pred EECCCCCEEEEeCCCceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC--------------CceEEEcCCC
Confidence 25788887767899999876 665543221111122333333 577887652 2466788877
Q ss_pred CCCceeec
Q 021080 292 ERPTWRQV 299 (317)
Q Consensus 292 ~~~~W~~~ 299 (317)
+ +++..
T Consensus 615 ~--~~~~~ 620 (795)
T 4a2l_A 615 E--KFRNF 620 (795)
T ss_dssp T--EEEEE
T ss_pred C--cEEEc
Confidence 7 66654
No 79
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.06 E-value=2.3 Score=36.14 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=28.4
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe-C-CEEEEEcC
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-A-GKLFVLGG 109 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~-~~iyv~GG 109 (317)
+..+|+.++. ...++.+|..+++....-..+.. .....++.. + +.+|+.+.
T Consensus 10 ~~~~~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~ 62 (349)
T 1jmx_B 10 GHEYMIVTNY-PNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNN 62 (349)
T ss_dssp TCEEEEEEET-TTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEET
T ss_pred CCEEEEEeCC-CCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeC
Confidence 5567766653 46899999998876543233320 011233332 3 35777764
No 80
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.04 E-value=3.3 Score=40.36 Aligned_cols=133 Identities=7% Similarity=-0.055 Sum_probs=73.4
Q ss_pred eeEEeeCCCCceeeCCCCC---ccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEeccCCc--cCCcE-EE---
Q 021080 149 QAEMYDPEKDVWVPIPDLH---RTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW--LQGPM-AI--- 217 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p---~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~--~~~~~-~~--- 217 (317)
-+.+||+.+++|+.....+ .. ......+. -+|.|++... ..-+.+||+.++++....... +...+ +.
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~-~~~i~~i~~d~~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d 547 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLL-ENFVRSIAQDSEGRFWIGTF-GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRS 547 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCS-CSCEEEEEECTTCCEEEEES-SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEEC
T ss_pred ceEEEeCCCCeEEecccCcccccc-cceeEEEEEcCCCCEEEEEc-CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEEC
Confidence 4667787777776553222 11 11112222 2567776532 245889999999888765321 11111 11
Q ss_pred EcCeEEEEeCcEE-EEecCCc--eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCCC
Q 021080 218 VHDSVYLMSHGLI-IKQHRDV--RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER 293 (317)
Q Consensus 218 ~~~~ly~~g~~~~-~~yd~~~--W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 293 (317)
-+|.|++...+.+ +.||+++ ++.......+....-.+++.. +|.|++.+. +.+.+||++++
T Consensus 548 ~~g~lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--------------~Gl~~~~~~~~- 612 (781)
T 3v9f_A 548 SKGQMWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--------------TGISCYITSKK- 612 (781)
T ss_dssp TTSCEEEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS--------------SCEEEEETTTT-
T ss_pred CCCCEEEEECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC--------------CceEEEECCCC-
Confidence 2578888877777 9999875 666543221111122344443 577887542 24667788777
Q ss_pred Cceeec
Q 021080 294 PTWRQV 299 (317)
Q Consensus 294 ~~W~~~ 299 (317)
+++..
T Consensus 613 -~~~~~ 617 (781)
T 3v9f_A 613 -CFYTY 617 (781)
T ss_dssp -EEEEE
T ss_pred -ceEEe
Confidence 66554
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.00 E-value=1 Score=43.86 Aligned_cols=96 Identities=10% Similarity=0.139 Sum_probs=56.0
Q ss_pred CCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--C--CEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCC
Q 021080 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--A--GKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFT 141 (317)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~ 141 (317)
...+..||...+.+..+..+... ......+.. . +..++.|+.+
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h---~~~V~~l~~s~~~~~~~l~s~s~D------------------------------ 76 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGH---EGPVWRVDWAHPKFGTILASCSYD------------------------------ 76 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCC---SSCEEEEEECCTTSCSEEEEEETT------------------------------
T ss_pred CCcEEEEecCCCCCccceeccCC---cCceEEEEecCCCCCCEEEEEeCC------------------------------
Confidence 35788888877677655444321 222323333 2 5666777653
Q ss_pred CCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE--C--CEEEEEecCceeEEEEeCCCC
Q 021080 142 SCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 142 ~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~--g~lyv~gG~~~~v~~yd~~~~ 201 (317)
..+.+||..+++|..+..+... ......+.+ + +.+++.|+....+..||..+.
T Consensus 77 ------g~I~vwd~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 77 ------GKVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp ------SCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ------CeEEEEECCCCcccccccccCC-CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3466777777777655443322 222233333 3 667777776778999998776
No 82
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.91 E-value=0.089 Score=46.74 Aligned_cols=125 Identities=5% Similarity=-0.024 Sum_probs=51.4
Q ss_pred eeEEeeCCCC--ceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCC--cEEeccCCcc---CCcEEEEcCe
Q 021080 149 QAEMYDPEKD--VWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWL---QGPMAIVHDS 221 (317)
Q Consensus 149 ~~~~yd~~t~--~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~--~W~~~~~~~~---~~~~~~~~~~ 221 (317)
.+.++|..++ .|+.-. .+ .....++.++++|+.+.....+.++|..++ .|........ ..++...++.
T Consensus 20 ~v~a~d~~tG~~~W~~~~---~~--~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~ 94 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE---DP--VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGI 94 (369)
T ss_dssp EEEEEETTTCCEEEEEEC---CC--SCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----
T ss_pred EEEEEECCCCCEEEEecC---CC--ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCE
Confidence 4555665554 365433 11 112234556778888665667999998655 4653221111 1222224666
Q ss_pred EEEEeC-cEEEEecCCc----eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCce
Q 021080 222 VYLMSH-GLIIKQHRDV----RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTW 296 (317)
Q Consensus 222 ly~~g~-~~~~~yd~~~----W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W 296 (317)
+|+... +.++.+|.++ |+.-.... . ..+..++.||+. +.+ ..+..||+++++..|
T Consensus 95 v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~----~~~p~~~~v~~~-~~d------------g~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEKQQTLSSAFA---D----SLSPSTSLLYLG-RTE------------YTITMYDTKTRELRW 154 (369)
T ss_dssp CCCCEEEEEEEEECCC-----------------------------EEEE-EEE------------EEEECCCSSSSSCCC
T ss_pred EEEEeCCCEEEEEECCCCcEEEEecCCCc---c----cccccCCEEEEE-ecC------------CEEEEEECCCCCEEE
Confidence 765443 6799999775 76532211 1 112244555543 211 257788888776668
Q ss_pred ee
Q 021080 297 RQ 298 (317)
Q Consensus 297 ~~ 298 (317)
+.
T Consensus 155 ~~ 156 (369)
T 2hz6_A 155 NA 156 (369)
T ss_dssp EE
T ss_pred eE
Confidence 74
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.83 E-value=1.3 Score=38.09 Aligned_cols=88 Identities=11% Similarity=0.059 Sum_probs=48.4
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEE--C--CEEEEEecCceeEEEEeCCCCcEEeccCCcc---CCcEEEE--c
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL---QGPMAIV--H 219 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~--g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~--~ 219 (317)
.+.+||...+++..+..+... ......+.+ + +.+.+.|+....+..||..+++|..+..... ....+.. +
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 112 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 112 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred cEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCC
Confidence 455666665565554433322 222233333 2 6677777766779999999988765543332 1111222 2
Q ss_pred --CeEEEEeC--cEEEEecCCc
Q 021080 220 --DSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 220 --~~ly~~g~--~~~~~yd~~~ 237 (317)
+.+++.++ +.+..||...
T Consensus 113 ~~~~~l~~~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 113 EYGPLLLVASSDGKVSVVEFKE 134 (379)
T ss_dssp GGCSEEEEEETTSEEEEEECCT
T ss_pred CCCCEEEEecCCCcEEEEecCC
Confidence 44555543 6788887654
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.73 E-value=2.7 Score=35.30 Aligned_cols=130 Identities=12% Similarity=0.025 Sum_probs=64.0
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEE--cCeE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIV--HDSV 222 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~--~~~l 222 (317)
..+.+||..+.+......+... ......+. -+++.++.|+....+..||..+.+-... ............ ++..
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCE
Confidence 3566677777664333222222 11222222 2566777777667799999988764322 111111112222 4444
Q ss_pred EEEeC--cEEEEecCCceEEEeccccccccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 223 YLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 223 y~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
++.++ +.+..||.++.+.+..... ...-..+.. -+++.+++|+.+ ..+.+||..+.
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~------------~~i~~~~~~~~ 256 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMES------------SNVEVLHVNKP 256 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETT------------SCEEEEETTSS
T ss_pred EEEEecCCcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCC------------CcEEEEECCCC
Confidence 44443 7889999877444333321 111122222 255666666532 25677777765
No 85
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=93.61 E-value=1.4 Score=36.15 Aligned_cols=55 Identities=9% Similarity=-0.020 Sum_probs=38.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe----ccCC---------ccCCcEEEE---cCeEEEEeCcEEEEecCC
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV----EDYG---------WLQGPMAIV---HDSVYLMSHGLIIKQHRD 236 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~----~~~~---------~~~~~~~~~---~~~ly~~g~~~~~~yd~~ 236 (317)
++++|++-| +..++||..+++... +... +....+|.. ++++|++.|+..+.||..
T Consensus 127 ~gk~yfFkG--~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~~ywr~d~~ 197 (225)
T 3oyo_A 127 GKEVYLFKG--NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQNYVRIDFT 197 (225)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETTEEEEEECC
T ss_pred CCcEEEEeC--CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECCEEEEEeCC
Confidence 789999977 568889877665432 1111 112344444 689999999999999987
No 86
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.61 E-value=2.3 Score=34.02 Aligned_cols=95 Identities=11% Similarity=-0.008 Sum_probs=54.5
Q ss_pred CCEEEEEecCceeEEEEeCCCCc-------EEeccCCccCCcEEEE--cCeEEEEeCcEEEEecCCceEEEeccc-----
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG-------WTVEDYGWLQGPMAIV--HDSVYLMSHGLIIKQHRDVRKVVASAS----- 245 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~-------W~~~~~~~~~~~~~~~--~~~ly~~g~~~~~~yd~~~W~~v~~~~----- 245 (317)
++++|++-| +..++|+..+.. | -++.......+|.. ++++|++-|+..+.||..+-+....-|
T Consensus 64 ~~~~yfFkG--~~yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDAA~~~~~g~~yfFkg~~ywr~d~~~~~~~~gyPr~i~~ 140 (195)
T 1itv_A 64 SKKLFFFSG--RQVWVYTGASVLGPRRLDKL-GLGADVAQVTGALRSGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDR 140 (195)
T ss_dssp TCCEEEEET--TEEEEEETTEEEEEEEGGGG-TCCTTCCCCCEEEECSTTEEEEEETTEEEEEETTTTEECGGGCEEHHH
T ss_pred CCeEEEEeC--CEEEEEcCCccCCCEEeeec-ccCCCccceeEEEEcCCCeEEEEeCCEEEEEeCCcccccCCCccChhh
Confidence 688999976 456677643211 2 11111112344443 679999999999999975422211111
Q ss_pred ---cccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 246 ---EFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 246 ---~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
....... ++...+|++|++-| +..+.||..+.
T Consensus 141 ~w~Gvp~~id-aa~~~~g~~Yffkg--------------~~y~~~~~~~~ 175 (195)
T 1itv_A 141 MFPGVPLDTH-DVFQFREKAYFCQD--------------RFYWRVSSRSE 175 (195)
T ss_dssp HSTTSCSSCS-EEEEETTEEEEEET--------------TEEEEEECCTT
T ss_pred cCCCCCCCCC-EEEEeCCeEEEEeC--------------CEEEEEECCcc
Confidence 1011222 34445799999876 25677888766
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.45 E-value=5.3 Score=38.61 Aligned_cols=101 Identities=11% Similarity=-0.043 Sum_probs=53.9
Q ss_pred CCEEEEEecCceeEEEEeCCCCc--EEeccCCccCCcEEEE----cCeEEEEeC--cEEEEecCCceEEEeccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWLQGPMAIV----HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRI 251 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~----~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~ 251 (317)
++.+++.|+....+..||..+.. ................ ++.+++.++ +.+..||....+.+..+.......
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v 231 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 46677777766789999986654 2222111112222222 566666654 688889887654444333111111
Q ss_pred cEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 GFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
......-++.+++.|+.+ ..|.+||+.+.
T Consensus 232 ~~~~~~~~~~~l~~~~~d------------g~v~vwd~~~~ 260 (814)
T 3mkq_A 232 SFAVFHPTLPIIISGSED------------GTLKIWNSSTY 260 (814)
T ss_dssp EEEEECSSSSEEEEEETT------------SCEEEEETTTC
T ss_pred EEEEEcCCCCEEEEEeCC------------CeEEEEECCCC
Confidence 111122255666666632 25677888765
No 88
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.44 E-value=3 Score=34.93 Aligned_cols=141 Identities=8% Similarity=-0.021 Sum_probs=72.3
Q ss_pred CceEEEE-------EeCCCCceEEEeCCCCCEeecCCCCccc-cccCCeeEEEe-C-CEEEEEcCcCCCCCCCCCCCCCc
Q 021080 55 ENLLCVC-------AFDPENLWQLYDPLRDLWITLPVLPSKI-RHLAHFGVVST-A-GKLFVLGGGSDAVDPLTGDQDGS 124 (317)
Q Consensus 55 ~~~l~v~-------gg~~~~~~~~yd~~~~~W~~~~~~p~~~-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~ 124 (317)
++.+|+. +. ....+..||+.++++..+.. +... ....-.+++.. + +++|+....
T Consensus 28 ~g~l~~~~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------------- 91 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGK-PAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADMR-------------- 91 (314)
T ss_dssp TSCEEEEETTCEETTE-ECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEETT--------------
T ss_pred CCCEEEEEeccccCCC-CCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEECC--------------
Confidence 4567766 21 13578999999988876532 1100 00111333332 4 678887642
Q ss_pred ccccceeEecccCCCCCCCcCCCceeEEeeCCCCceeeC-CCCCc--cC-CCceEEEEECCEEEEEecCc----------
Q 021080 125 FATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPI-PDLHR--TH-NSACTGVVIGGKVHVLHKGL---------- 190 (317)
Q Consensus 125 ~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~--~~-r~~~~~~~~~g~lyv~gG~~---------- 190 (317)
..+.+||+. ++...+ ..... +. ....-++--+|++|+.....
T Consensus 92 -----------------------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 92 -----------------------LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp -----------------------TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred -----------------------CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccc
Confidence 235556666 555444 22111 10 11112222367888876422
Q ss_pred -----eeEEEEeCCCCcEEeccCCcc-CCcEEEE-----cC-eEEEEeC--cEEEEecCC
Q 021080 191 -----STVQVLDHMGLGWTVEDYGWL-QGPMAIV-----HD-SVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 191 -----~~v~~yd~~~~~W~~~~~~~~-~~~~~~~-----~~-~ly~~g~--~~~~~yd~~ 236 (317)
..++.||+. ++...+..... +...+.. ++ .+|+.+. +.++.|+.+
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp TSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred ccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 579999987 55544321111 1233333 23 5788763 688888854
No 89
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.41 E-value=1.1 Score=38.60 Aligned_cols=55 Identities=11% Similarity=0.091 Sum_probs=30.5
Q ss_pred CCEEEEEecCceeEEEEeCC-CCcEEeccCCc--c---CCcEEE-EcCe-EEEEeC--cEEEEec
Q 021080 180 GGKVHVLHKGLSTVQVLDHM-GLGWTVEDYGW--L---QGPMAI-VHDS-VYLMSH--GLIIKQH 234 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~-~~~W~~~~~~~--~---~~~~~~-~~~~-ly~~g~--~~~~~yd 234 (317)
+|++|+.+.....+..||+. +++...+.... . +..++. -+++ +|+.+. +.+..|+
T Consensus 151 dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 215 (347)
T 3hfq_A 151 DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLK 215 (347)
T ss_dssp TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 67788776656679999987 55554332111 0 111222 2454 787754 5555554
No 90
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.33 E-value=3.2 Score=34.86 Aligned_cols=89 Identities=15% Similarity=0.054 Sum_probs=52.6
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCC-cEEeccCCccCCcEEE-EcCeEEEEeC--cEEEEecCCc----eEEEeccccc
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGL-GWTVEDYGWLQGPMAI-VHDSVYLMSH--GLIIKQHRDV----RKVVASASEF 247 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~-~~~~ly~~g~--~~~~~yd~~~----W~~v~~~~~~ 247 (317)
....+|.+++.......+.+||+.-+ .|+.-....+ ..++. .+|.+++.+. +.++.+|+++ |+.-..-.+
T Consensus 131 ~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~-~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~- 208 (276)
T 3no2_A 131 NKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTP-FSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE- 208 (276)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCC-CEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB-
T ss_pred eECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCc-cceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC-
Confidence 34456777776655678999999733 3775543222 23333 3677777754 5899999884 887532211
Q ss_pred cccc--cEEEE-EECCeEEEEe
Q 021080 248 RRRI--GFAMI-GMGDDIYVIG 266 (317)
Q Consensus 248 ~~r~--~~~~~-~~~~~lyv~G 266 (317)
..+. -.++. .-+|.+|+..
T Consensus 209 ~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCCCSEEEEEEECTTSCEEEEE
T ss_pred CccccccccceEcCCCCEEEEe
Confidence 1121 12233 3378898886
No 91
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=93.25 E-value=2.9 Score=34.12 Aligned_cols=87 Identities=14% Similarity=0.085 Sum_probs=53.0
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCC-cE-----EeccC---CccC-----CcEEEE---cCeEEEEeCcEEEEecCCc-
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGL-GW-----TVEDY---GWLQ-----GPMAIV---HDSVYLMSHGLIIKQHRDV- 237 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~-~W-----~~~~~---~~~~-----~~~~~~---~~~ly~~g~~~~~~yd~~~- 237 (317)
+...+|++|++-| +..++|+..++ +- ..+.. .+.. ..+|.. ++++|++.|+..+.||.++
T Consensus 68 A~~~~~~~yfFkG--~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~~ywr~d~~~~ 145 (219)
T 1hxn_A 68 AFSWEDKLYLIQD--TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGRRLWWLDLKSG 145 (219)
T ss_dssp EEEETTEEEEEET--TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETTEEEEEEGGGG
T ss_pred EEEECCcEEEecC--CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCCEEEEEeCCCC
Confidence 4445999999966 56888886532 10 01110 1112 344443 5799999999999999654
Q ss_pred ----eEEEeccccccccccEEEEE-----------ECCeEEEEeC
Q 021080 238 ----RKVVASASEFRRRIGFAMIG-----------MGDDIYVIGG 267 (317)
Q Consensus 238 ----W~~v~~~~~~~~r~~~~~~~-----------~~~~lyv~GG 267 (317)
|...+.+| .....++.. .++.+|++-|
T Consensus 146 P~~i~~~~~g~p---~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg 187 (219)
T 1hxn_A 146 AQATWTELPWPH---EKVDGALCMEKPLGPNSCSTSGPNLYLIHG 187 (219)
T ss_dssp GGCCCEEECCSC---SCCSEEEEESSCSSSCCSCSSSCEEEEEET
T ss_pred ceEhhhcCCCCC---CCcCEEEEccccccccceeccCCeEEEEEC
Confidence 76655544 233344442 3567999877
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.20 E-value=3.3 Score=34.74 Aligned_cols=62 Identities=11% Similarity=-0.097 Sum_probs=34.4
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVV 241 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v 241 (317)
++.+++.|+....+..||+.+.+-. .+............ ++.+++.++ +.+..||..+.+.+
T Consensus 118 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 118 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 5566777776677999999876532 22211111111222 455555553 67888887764333
No 93
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.20 E-value=3.6 Score=35.12 Aligned_cols=88 Identities=9% Similarity=-0.056 Sum_probs=46.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEeccccccccccEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFA 254 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~ 254 (317)
++++.+.|+....+..||..+..-... .........+.. +++.++.++ +.+..+|..+.+.+..+.. ....-.+
T Consensus 217 d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~ 295 (321)
T 3ow8_A 217 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWG 295 (321)
T ss_dssp TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEE
Confidence 677778887667799999987654322 111001111122 455554443 6788888887655554432 1111122
Q ss_pred EEEE-CCeEEEEeCc
Q 021080 255 MIGM-GDDIYVIGGV 268 (317)
Q Consensus 255 ~~~~-~~~lyv~GG~ 268 (317)
+... +++.++.||.
T Consensus 296 v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 296 VKYNGNGSKIVSVGD 310 (321)
T ss_dssp EEECTTSSEEEEEET
T ss_pred EEECCCCCEEEEEeC
Confidence 2222 4566666664
No 94
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=93.16 E-value=2.8 Score=38.19 Aligned_cols=96 Identities=7% Similarity=0.034 Sum_probs=55.2
Q ss_pred CCEEEEEecCceeEEEEeCCCCc--E-E------eccCCccCCcEEEE---cCeEEEEeCcEEEEecCCceEE-------
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG--W-T------VEDYGWLQGPMAIV---HDSVYLMSHGLIIKQHRDVRKV------- 240 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~--W-~------~~~~~~~~~~~~~~---~~~ly~~g~~~~~~yd~~~W~~------- 240 (317)
+|++|++-| +..++|+..+-. + . -++..+....+|.. ++++|++-|+..|.|+...-+.
T Consensus 318 ~g~~~fFKg--~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~~yw~yd~~~~~~~~gYPk~ 395 (450)
T 1su3_A 318 RDEVRFFKG--NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSMDPGYPKM 395 (450)
T ss_dssp GTEEEEEET--TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETTEEEEEETTTTEECSSCSEE
T ss_pred CCeEEEEeC--CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCCEEEEEeCCCccccCCCCcc
Confidence 799999966 456777643210 0 0 11111112334432 5899999999999998753222
Q ss_pred Ee-ccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 241 VA-SASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 241 v~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+. ..|........+ +..++++|++-| +..|.||..+.
T Consensus 396 I~~~fpgip~~iDAA-~~~~g~~YFFkg--------------~~ywr~d~~~~ 433 (450)
T 1su3_A 396 IAHDFPGIGHKVDAV-FMKDGFFYFFHG--------------TRQYKFDPKTK 433 (450)
T ss_dssp HHHHSTTSCSCCSEE-EEETTEEEEEET--------------TEEEEEETTTT
T ss_pred hhhcCCCCCCCccEE-EEcCCeEEEEeC--------------CEEEEEECCcc
Confidence 21 112111223333 346899999976 25688888776
No 95
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.99 E-value=3 Score=33.65 Aligned_cols=96 Identities=7% Similarity=-0.005 Sum_probs=56.2
Q ss_pred CCEEEEEecCceeEEEEeCCCCcE---EeccCC-cc----CCcEEEE---cCeEEEEeCcEEEEecCCceEEEecccc--
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGW---TVEDYG-WL----QGPMAIV---HDSVYLMSHGLIIKQHRDVRKVVASASE-- 246 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W---~~~~~~-~~----~~~~~~~---~~~ly~~g~~~~~~yd~~~W~~v~~~~~-- 246 (317)
++++|++-| +..++|+..+-.- ..+... .+ ...+|.. ++++|++.|+..+.||..+-+....-|.
T Consensus 79 ~~~iyfFkG--~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~~ywr~d~~~~~~d~gyPr~i 156 (207)
T 1pex_A 79 HDLIFIFRG--RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNHIMDKDYPRLI 156 (207)
T ss_dssp TTEEEEEET--TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETTEEEEEETTTTEECSSCCCBH
T ss_pred CCcEEEEcc--CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCCEEEEEeCcCccccCCCCccH
Confidence 689999976 4577776432111 122211 11 2344443 4799999999999999764222211111
Q ss_pred ------ccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 247 ------FRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 247 ------~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...+...++ ..++++|++-| +..+.||..+.
T Consensus 157 ~~~~~Gip~~iDaAf-~~~g~~YfFkg--------------~~y~rf~~~~~ 193 (207)
T 1pex_A 157 EEDFPGIGDKVDAVY-EKNGYIYFFNG--------------PIQFEYSIWSN 193 (207)
T ss_dssp HHHSTTSCSCCSEEE-EETTEEEEEET--------------TEEEEEETTTT
T ss_pred HHcCCCCCCCccEEE-EcCCcEEEEEC--------------CEEEEEeCCcc
Confidence 112233334 46899999966 26678888776
No 96
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.98 E-value=1.9 Score=36.35 Aligned_cols=95 Identities=9% Similarity=-0.052 Sum_probs=49.7
Q ss_pred ceeEEeeCCCCceeeCCCCCccC-CCceEEEEECC-EEEEEecCceeEEEEeCCCCcEEe-ccCCc------cCCcEEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTH-NSACTGVVIGG-KVHVLHKGLSTVQVLDHMGLGWTV-EDYGW------LQGPMAIV 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~-r~~~~~~~~~g-~lyv~gG~~~~v~~yd~~~~~W~~-~~~~~------~~~~~~~~ 218 (317)
..+.++|..+.+-...-.++... .....+..-+| .+|+.+.....+..+|+.+.+-.. +.... ....++..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s 90 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALS 90 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEEC
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEEC
Confidence 45667777666543221222100 00112222345 688877666789999998876432 22111 12233332
Q ss_pred -cC-eEEEEe-------------CcEEEEecCCceEEEe
Q 021080 219 -HD-SVYLMS-------------HGLIIKQHRDVRKVVA 242 (317)
Q Consensus 219 -~~-~ly~~g-------------~~~~~~yd~~~W~~v~ 242 (317)
++ .+|+.. .+.++.||.++.+.+.
T Consensus 91 ~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred CCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 34 677773 4789999987644333
No 97
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.94 E-value=2.6 Score=35.82 Aligned_cols=87 Identities=13% Similarity=0.022 Sum_probs=48.9
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE--ECCEEEEEecCc----eeEEEEeCCCCcEEec-cCCcc--CC-cEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGL----STVQVLDHMGLGWTVE-DYGWL--QG-PMAI 217 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~--~~g~lyv~gG~~----~~v~~yd~~~~~W~~~-~~~~~--~~-~~~~ 217 (317)
..+.+||+.+++...+...+.. ...++. -+|++|+..... ..+..||+.++....+ ..... .. .++.
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 142 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVF 142 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEE
T ss_pred CEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEE
Confidence 3566777777766554211111 122333 367888876432 5799999988876522 21111 11 1122
Q ss_pred -EcCeEEEEeC--------cEEEEecCCc
Q 021080 218 -VHDSVYLMSH--------GLIIKQHRDV 237 (317)
Q Consensus 218 -~~~~ly~~g~--------~~~~~yd~~~ 237 (317)
-++++|+... +.++.++++.
T Consensus 143 d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 143 DSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp CTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 2678888754 5789998764
No 98
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.94 E-value=1.3 Score=38.38 Aligned_cols=140 Identities=9% Similarity=0.042 Sum_probs=67.9
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEeccCCccC-CcE--EEE--cC
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQ-GPM--AIV--HD 220 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~-~~~--~~~--~~ 220 (317)
..+.+||..+++|.....+..++......+. -++++.+.|+....+..||..++.+..+.....+ ..+ +.. ++
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 117 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG 117 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC
Confidence 3466677777766533222112111222222 2677777777666788888877766544322221 111 111 45
Q ss_pred eEEEEeC--cEEEEecCCc---eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCCCC
Q 021080 221 SVYLMSH--GLIIKQHRDV---RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERP 294 (317)
Q Consensus 221 ~ly~~g~--~~~~~yd~~~---W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~ 294 (317)
++++.++ +.++.+|... +..+..+.. ....-..++.. ++++++.|+.+ ..|.+||.+++
T Consensus 118 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d------------~~i~~w~~~~~-- 182 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASASYD------------DTVKLYREEED-- 182 (345)
T ss_dssp SEEEEEETTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEEETT------------SCEEEEEEETT--
T ss_pred CEEEEEECCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEEeCC------------CcEEEEEecCC--
Confidence 5555543 5677776543 444433321 01111112222 45666666533 25677888777
Q ss_pred ceeecccC
Q 021080 295 TWRQVSPM 302 (317)
Q Consensus 295 ~W~~~~~~ 302 (317)
+|..+..+
T Consensus 183 ~~~~~~~~ 190 (345)
T 3fm0_A 183 DWVCCATL 190 (345)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEe
Confidence 77654443
No 99
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.92 E-value=4.5 Score=35.51 Aligned_cols=174 Identities=9% Similarity=-0.045 Sum_probs=87.4
Q ss_pred CCceEEEeCCCCCEeecCCCCccccccCCeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCc
Q 021080 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCR 144 (317)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~ 144 (317)
...+..||..+++.......... ..-.+++.. ++..+++|+.+
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~d--------------------------------- 155 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLGN--------------------------------- 155 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEETT---------------------------------
T ss_pred CCeEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECCC---------------------------------
Confidence 35788999988877655443221 111222222 45566666542
Q ss_pred CCCceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCccCCcEEEE--cC
Q 021080 145 KSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWLQGPMAIV--HD 220 (317)
Q Consensus 145 ~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~--~~ 220 (317)
..+.+||..+++-...-.-. ......+..++.+++.|+....+..||..... -..+............ ++
T Consensus 156 ---g~i~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 229 (401)
T 4aez_A 156 ---GLVDIYDVESQTKLRTMAGH---QARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDG 229 (401)
T ss_dssp ---SCEEEEETTTCCEEEEECCC---SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred ---CeEEEEECcCCeEEEEecCC---CCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCC
Confidence 24556666655432221111 22223444467777777767789999987433 1112111111111112 45
Q ss_pred eEEEEeC--cEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 221 SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 221 ~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+++.++ +.+..||..+-+.+..+.. ....-.++... ++.+++.||-... ..+.+||..++
T Consensus 230 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~gs~d----------~~i~i~d~~~~ 294 (401)
T 4aez_A 230 LQLASGGNDNVVQIWDARSSIPKFTKTN-HNAAVKAVAWCPWQSNLLATGGGTMD----------KQIHFWNAATG 294 (401)
T ss_dssp SEEEEEETTSCEEEEETTCSSEEEEECC-CSSCCCEEEECTTSTTEEEEECCTTT----------CEEEEEETTTC
T ss_pred CEEEEEeCCCeEEEccCCCCCccEEecC-CcceEEEEEECCCCCCEEEEecCCCC----------CEEEEEECCCC
Confidence 5555554 6888888876333222221 11111222322 4577777752222 26788888776
No 100
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.86 E-value=2.1 Score=37.01 Aligned_cols=105 Identities=18% Similarity=0.126 Sum_probs=49.3
Q ss_pred eEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeEec
Q 021080 57 LLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (317)
Q Consensus 57 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d 134 (317)
.+++.|+ ....+..||..++.|..+..+... ......+.. ++..++.|+.+
T Consensus 24 ~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~h---~~~v~~~~~s~~~~~l~s~s~d----------------------- 76 (377)
T 3dwl_C 24 TEFVTTT-ATNQVELYEQDGNGWKHARTFSDH---DKIVTCVDWAPKSNRIVTCSQD----------------------- 76 (377)
T ss_dssp SEEECCC-SSSCBCEEEEETTEEEECCCBCCC---SSCEEEEEECTTTCCEEEEETT-----------------------
T ss_pred CEEEEec-CCCEEEEEEccCCceEEEEEEecC---CceEEEEEEeCCCCEEEEEeCC-----------------------
Confidence 3344443 235778888888888776665532 222222222 45666666643
Q ss_pred ccCCCCCCCcCCCceeEEeeCCCCc-eeeCCCCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCc
Q 021080 135 PVTRGFTSCRKSISQAEMYDPEKDV-WVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLG 202 (317)
Q Consensus 135 ~~~~G~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~ 202 (317)
..+.+||..+++ |.....+... ......+. -++++++.|+....+..||..++.
T Consensus 77 -------------~~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 77 -------------RNAYVYEKRPDGTWKQTLVLLRL-NRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp -------------SSEEEC------CCCCEEECCCC-SSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred -------------CeEEEEEcCCCCceeeeeEeccc-CCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 245556666655 4333222111 11222222 256666777656678888887764
No 101
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.84 E-value=4.3 Score=35.20 Aligned_cols=129 Identities=11% Similarity=-0.001 Sum_probs=62.6
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEE---CCEEEEEecCceeEEEEeCCCCcE-EeccCCccCCcEEEE--cC-e
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVI---GGKVHVLHKGLSTVQVLDHMGLGW-TVEDYGWLQGPMAIV--HD-S 221 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~---~g~lyv~gG~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~--~~-~ 221 (317)
.+.+||.++.+-...-..... ......+.+ ++.+++.|+....+..||..+.+= ..+............ ++ +
T Consensus 205 ~v~~wd~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 283 (357)
T 4g56_B 205 RILLWDTRKPKPATRIDFCAS-DTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSP 283 (357)
T ss_dssp CEEECCTTSSSCBCBCCCTTC-CSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSC
T ss_pred ceEEEECCCCceeeeeeeccc-cccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCC
Confidence 455677666543332222222 222233333 356777777667789999876541 111111111111222 33 4
Q ss_pred EEEEeC--cEEEEecCCceEEEeccccccccccEEEEE--ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 222 VYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIG--MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 222 ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+.+.++ +.++.||.+.-+.+..+. ....-.+++. .++++++.||.++ .|.+||+.++
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~~~--H~~~V~~vafsP~d~~~l~s~s~Dg------------~v~iW~~~~~ 344 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRDLS--HRDFVTGVAWSPLDHSKFTTVGWDH------------KVLHHHLPSE 344 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECC--CSSCEEEEEECSSSTTEEEEEETTS------------CEEEEECC--
T ss_pred EEEEEeCCCEEEEEECCCCcEeEECC--CCCCEEEEEEeCCCCCEEEEEcCCC------------eEEEEECCCC
Confidence 444333 678888887744443332 1111122332 3577888887542 5677887654
No 102
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.83 E-value=5 Score=35.75 Aligned_cols=133 Identities=11% Similarity=0.012 Sum_probs=67.4
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE-ECCE-EEEEec--CceeEEEEeCCCCcEEeccCCccCCcEEE--EcCe
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-IGGK-VHVLHK--GLSTVQVLDHMGLGWTVEDYGWLQGPMAI--VHDS 221 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~-~~g~-lyv~gG--~~~~v~~yd~~~~~W~~~~~~~~~~~~~~--~~~~ 221 (317)
..++++|..+++...+..-... ...... -+|+ |++.+. ....++.+|..++.-..+........... -+++
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~---~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSN---NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSC---EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS
T ss_pred ceEEEEECCCCCEEeCcCCCCc---ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC
Confidence 4677788888776665443221 111222 2555 444443 23478889998876554432211111111 2444
Q ss_pred -EEEEeC----cEEEEecCCc--eEEEeccccccccccEEEE-EECCeEEEEeCcccCCCCceecccCcceeEeecCCCC
Q 021080 222 -VYLMSH----GLIIKQHRDV--RKVVASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER 293 (317)
Q Consensus 222 -ly~~g~----~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 293 (317)
|++... ..++.+|.++ .+.+... . ....+. .-+++.+++++.+.. ...++++|++.+
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~----~-~~~~~~~spdg~~l~~~s~~~~---------~~~l~~~d~~g~- 388 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQVLSST----F-LDETPSLAPNGTMVIYSSSQGM---------GSVLNLVSTDGR- 388 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEECCCS----S-SCEEEEECTTSSEEEEEEEETT---------EEEEEEEETTSC-
T ss_pred EEEEEECcCCceEEEEEECCCCCEEEecCC----C-CcCCeEEcCCCCEEEEEEcCCC---------ccEEEEEECCCC-
Confidence 443332 4788888776 4443221 1 111222 225666666654322 237889998876
Q ss_pred Cceeec
Q 021080 294 PTWRQV 299 (317)
Q Consensus 294 ~~W~~~ 299 (317)
.-..+
T Consensus 389 -~~~~l 393 (415)
T 2hqs_A 389 -FKARL 393 (415)
T ss_dssp -CEEEC
T ss_pred -cEEEe
Confidence 55554
No 103
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.75 E-value=3.6 Score=33.92 Aligned_cols=96 Identities=9% Similarity=0.060 Sum_probs=58.5
Q ss_pred CCEEEEEecC--ceeEEEEeCCCCcEEeccC--CccCCcEEEE--cCeEEEEeC--cEEEEecCCc-e-E-EEecccccc
Q 021080 180 GGKVHVLHKG--LSTVQVLDHMGLGWTVEDY--GWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV-R-K-VVASASEFR 248 (317)
Q Consensus 180 ~g~lyv~gG~--~~~v~~yd~~~~~W~~~~~--~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~-W-~-~v~~~~~~~ 248 (317)
+++||+.... ...++++++....-+.+.. ...+..++.- ++.||+... +.+..++.+. - + .+...
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---- 208 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---- 208 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC----
T ss_pred CCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC----
Confidence 6899998753 4678898886544333321 1112233332 568999985 7899999875 1 1 12111
Q ss_pred ccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 249 RRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 249 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..-.+++..++.||+.... .+.|.++|++++
T Consensus 209 -~~P~gi~~d~~~lyva~~~------------~~~v~~~d~~~g 239 (267)
T 1npe_A 209 -QYPFAVTSYGKNLYYTDWK------------TNSVIAMDLAIS 239 (267)
T ss_dssp -CSEEEEEEETTEEEEEETT------------TTEEEEEETTTT
T ss_pred -CCceEEEEeCCEEEEEECC------------CCeEEEEeCCCC
Confidence 1223556668999996431 237889999876
No 104
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=92.74 E-value=3.2 Score=35.66 Aligned_cols=89 Identities=7% Similarity=-0.133 Sum_probs=46.8
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-ccCCccCCcEE--EE--cCeEEEEeC--cEEEEecCCceEEEecccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQGPMA--IV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIG 252 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~~~~~~~~~--~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~ 252 (317)
++++++.|+....+..||..++.-.. .........+. .. ++++++.++ +.+..||....+.+..+..-....
T Consensus 237 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v- 315 (340)
T 1got_B 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV- 315 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcE-
Confidence 56777777766779999998765321 11110011121 11 456666654 688899887755544443201111
Q ss_pred EEEEE-ECCeEEEEeCcc
Q 021080 253 FAMIG-MGDDIYVIGGVI 269 (317)
Q Consensus 253 ~~~~~-~~~~lyv~GG~~ 269 (317)
..+.. -+++.++.|+.+
T Consensus 316 ~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 316 SCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEEEECTTSSCEEEEETT
T ss_pred EEEEEcCCCCEEEEEcCC
Confidence 12222 256666777644
No 105
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.74 E-value=2.6 Score=36.79 Aligned_cols=100 Identities=13% Similarity=-0.064 Sum_probs=50.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-eccCCccC-CcEEEE-cCeEEEEeC-cEEEEecCCceEEEeccccccccccEEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQ-GPMAIV-HDSVYLMSH-GLIIKQHRDVRKVVASASEFRRRIGFAM 255 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~-~~~~~~-~~~ly~~g~-~~~~~yd~~~W~~v~~~~~~~~r~~~~~ 255 (317)
++++++.|+....+..||..+..-. .+...... ..++.. ++.++..+. +.+..||....+.+..+.. ....-..+
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~ 336 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV-DGVPIFAG 336 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC-TTCCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc-CCccEEEE
Confidence 5666677776677889998765421 11111111 122222 343333332 7899999877554444331 11111122
Q ss_pred EE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 256 IG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 256 ~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.. -++++++.|+.+ ..|.+||+.+.
T Consensus 337 ~~s~~~~~l~~~~~d------------g~i~i~~~~~~ 362 (425)
T 1r5m_A 337 RISQDGQKYAVAFMD------------GQVNVYDLKKL 362 (425)
T ss_dssp EECTTSSEEEEEETT------------SCEEEEECHHH
T ss_pred EEcCCCCEEEEEECC------------CeEEEEECCCC
Confidence 22 246666666532 25677777655
No 106
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.34 E-value=4.7 Score=34.26 Aligned_cols=23 Identities=4% Similarity=-0.179 Sum_probs=16.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG 202 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~ 202 (317)
++...+.|+....+..||..+.+
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHH
T ss_pred CCCEEEEecCCCCEEEEECCCCc
Confidence 46666777766779999988654
No 107
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.30 E-value=5.9 Score=36.16 Aligned_cols=90 Identities=10% Similarity=0.076 Sum_probs=51.8
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc------------EEeccCC---------------------ccCCcEEE--Ec
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG------------WTVEDYG---------------------WLQGPMAI--VH 219 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~------------W~~~~~~---------------------~~~~~~~~--~~ 219 (317)
+|...+|++|++-| +..++||..+++ |...+.. .....+++ .+
T Consensus 192 AA~~~~g~~YfFkG--~~y~rfd~~~~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~ 269 (460)
T 1qhu_A 192 SALRWLGRYYCFQG--NQFLRFNPVSGEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNH 269 (460)
T ss_dssp EEEEETTEEEEEET--TEEEEECTTTCCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTT
T ss_pred hheeeCCceEEEEC--CEEEEEcCccCcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCC
Confidence 45667899999977 467888876543 2221110 00122333 36
Q ss_pred CeEEEEeCcEEEEecCCc--eE--EE-eccccccccccEEEEEECCeEEEEeC
Q 021080 220 DSVYLMSHGLIIKQHRDV--RK--VV-ASASEFRRRIGFAMIGMGDDIYVIGG 267 (317)
Q Consensus 220 ~~ly~~g~~~~~~yd~~~--W~--~v-~~~~~~~~r~~~~~~~~~~~lyv~GG 267 (317)
|++|++-++..+.++... +. .+ ...|....... ++...++++|+|=|
T Consensus 270 G~tYFFKg~~yWR~~~~~~~~~p~~Is~~WpglP~~ID-AAf~~~~~~yfFkG 321 (460)
T 1qhu_A 270 GATYVFSGSHYWRLDTNRDGWHSWPIAHQWPQGPSTVD-AAFSWEDKLYLIQD 321 (460)
T ss_dssp CCEEEEETTEEEECTTGGGCCCCEEGGGTCTTSCSSCS-EEEEETTEEEEEET
T ss_pred CeEEEEeCCEEEEEecCCCCcCccchhhhccCCCCCCc-EEEEECCeEEEEeC
Confidence 899999999999998643 21 11 11121112222 33445789999865
No 108
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.27 E-value=8.9 Score=37.35 Aligned_cols=186 Identities=9% Similarity=0.037 Sum_probs=98.3
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEE-EeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVV-STAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.|++... ..+.+||+.+++...+....... ...-.++. .-++.|++...
T Consensus 98 ~g~lWigT~---~Gl~~yd~~~~~f~~~~~~~~~~-~~~i~~i~~d~~g~lwi~t~------------------------ 149 (795)
T 4a2l_A 98 QGRVWIGTR---DGLSRYDEEKDIFQNFFYEKNGK-HLQVNGIEEISPEQLLISTP------------------------ 149 (795)
T ss_dssp TSCEEEEES---SCEEEEETTTTEEEEECCEETTE-ECCCCEEEEEETTEEEEEET------------------------
T ss_pred CCCEEEEeC---CchheeCCCCCeEEeccccccCC-CceEEEEEECCCCCEEEEEC------------------------
Confidence 345665442 46788999888877654321110 00011222 23667776542
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCC-CCccCC-CceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPD-LHRTHN-SACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL 211 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~~r-~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~ 211 (317)
..+.+||.+++++..+.. .+.. . ...-..--+|.||+.. ....+..||+.++++........
T Consensus 150 --------------~gl~~~~~~~~~~~~~~~~~~~~-~~i~~i~~d~~g~lwigt-~~~Gl~~~~~~~~~~~~~~~~~~ 213 (795)
T 4a2l_A 150 --------------EGLIMFDIKESKFIDDSFSTAMH-KTIASTLYRQGDQIYIGT-STDGLYTYSITQKTFEKVIPILG 213 (795)
T ss_dssp --------------TEEEEEETTTTEEECSSSCHHHH-TCCEEEEEEETTEEEEEE-SSSCEEEEETTTCCEEECC----
T ss_pred --------------CceEEEECCCCEEEeccCCCCCC-cceEEEEECCCCCEEEEE-CCCCEEEEeCCCCeEEEecCCCC
Confidence 235667777777765533 1111 1 1112223478888843 22358999999999887642211
Q ss_pred CCc---EE-EEcCeEEEEe-CcEEEEecCCc--eEEEeccc---c-ccccccEEEEEE-CCeEEEEeCcccCCCCceecc
Q 021080 212 QGP---MA-IVHDSVYLMS-HGLIIKQHRDV--RKVVASAS---E-FRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIK 279 (317)
Q Consensus 212 ~~~---~~-~~~~~ly~~g-~~~~~~yd~~~--W~~v~~~~---~-~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~ 279 (317)
... +. .-++.|++.. ++.++.||+++ ++.....+ . .....-.++... +|.|++-..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~------------ 281 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF------------ 281 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES------------
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC------------
Confidence 111 11 2367788775 45799999875 66554321 0 011111223333 567776321
Q ss_pred cCcceeEeecCCCCCceeecc
Q 021080 280 PMSDVDVLTVGAERPTWRQVS 300 (317)
Q Consensus 280 ~~~~v~~yd~~~~~~~W~~~~ 300 (317)
..+.+||+.++ ++..+.
T Consensus 282 --~Gl~~~~~~~~--~~~~~~ 298 (795)
T 4a2l_A 282 --NDLNIYHEGTD--SFASYS 298 (795)
T ss_dssp --SCEEEEETTTT--EEEEEC
T ss_pred --ChhheEcCCCC--eEEEEe
Confidence 14677888877 777664
No 109
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.22 E-value=4.5 Score=34.30 Aligned_cols=60 Identities=15% Similarity=-0.129 Sum_probs=33.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCc--EEeccCCcc----CCcEEE------EcCeEEEEeC--cEEEEecCCceE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWL----QGPMAI------VHDSVYLMSH--GLIIKQHRDVRK 239 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~----~~~~~~------~~~~ly~~g~--~~~~~yd~~~W~ 239 (317)
+++..+.|+....+..||+.+.. ...+..... ...... .++.+++.+. +.+..||.+.-+
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence 46666777766778899988764 333322111 111111 2455555553 688899887733
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.20 E-value=6.4 Score=36.67 Aligned_cols=114 Identities=8% Similarity=0.043 Sum_probs=59.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcE---EeccCCccCCcEEE-EcCe-EEEEeC--cEEEEecCCceEEEecccc---ccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGW---TVEDYGWLQGPMAI-VHDS-VYLMSH--GLIIKQHRDVRKVVASASE---FRR 249 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W---~~~~~~~~~~~~~~-~~~~-ly~~g~--~~~~~yd~~~W~~v~~~~~---~~~ 249 (317)
++.+|+.......+..+|..+..- ..++.....+..+. -+++ +|+... +.+..+|.++-+.+..++. +..
T Consensus 291 ~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~ 370 (543)
T 1nir_A 291 HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 370 (543)
T ss_dssp SSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC
T ss_pred CCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC
Confidence 456666655667889999876431 12222111223332 2455 555542 6888899887444433331 111
Q ss_pred cccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC---CCceeecccCCC
Q 021080 250 RIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE---RPTWRQVSPMTR 304 (317)
Q Consensus 250 r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~---~~~W~~~~~~p~ 304 (317)
..+..+..- ++.+|+.+.... +.|.+||..+. ...|+.+..++.
T Consensus 371 g~g~~~~~p~~g~~~~s~~~~d-----------~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 371 GRGANFVHPKYGPVWSTSHLGD-----------GSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCCcccCCCCCccEEEeccCCC-----------ceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 122222221 467887764322 26778888763 113887766654
No 111
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.84 E-value=2 Score=36.56 Aligned_cols=56 Identities=13% Similarity=-0.004 Sum_probs=31.6
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEE-EECC-EEEEEecCceeEEEEeCCCCcEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGG-KVHVLHKGLSTVQVLDHMGLGWT 204 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~-~~~g-~lyv~gG~~~~v~~yd~~~~~W~ 204 (317)
..+.++|+.+++....-+.+.. ......+ .-+| .+|+.+.....+..||+.+++-.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEEecCCC-CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 4566777777655432222221 0111222 2344 57887765678999999887643
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.81 E-value=6.5 Score=34.76 Aligned_cols=42 Identities=17% Similarity=0.140 Sum_probs=24.7
Q ss_pred CceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcC
Q 021080 67 NLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGS 111 (317)
Q Consensus 67 ~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~ 111 (317)
..++.+|..+++...+-.+... ......+.. ++..++.|+.+
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~---~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCST---TCCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEEecCC---CCcEEEEEECCCCCEEEEEECC
Confidence 6899999999887665444331 122222222 45667777653
No 113
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.74 E-value=6 Score=34.22 Aligned_cols=130 Identities=11% Similarity=-0.011 Sum_probs=59.8
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE---CCEEEEEecCceeEEEEeCCCCcE-EeccCCccCCcEEEE--cC-
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI---GGKVHVLHKGLSTVQVLDHMGLGW-TVEDYGWLQGPMAIV--HD- 220 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~---~g~lyv~gG~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~--~~- 220 (317)
..+.+||.++.+-...-..... .....++.. ++++++.|+....|..||..+.+- ..+.........+.. ++
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~ 270 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAP-GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV 270 (344)
T ss_dssp SCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS
T ss_pred cccccccccccceeeeeeccee-eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 3466777776653322111111 111222222 456777777667899999877641 111111111111222 33
Q ss_pred eEEEEeC--cEEEEecCCceEEEeccccccccccEEEEE--ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 221 SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIG--MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 221 ~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
++.+.++ +.++.||.++-+.+.... ....-.+++. .+..+++.||.++ .|.+|++.++
T Consensus 271 ~~lasgs~D~~i~vwd~~~~~~~~~~~--H~~~V~~v~~sp~~~~llas~s~D~------------~v~~w~v~~~ 332 (344)
T 4gqb_B 271 PFLASLSEDCSLAVLDSSLSELFRSQA--HRDFVRDATWSPLNHSLLTTVGWDH------------QVVHHVVPTE 332 (344)
T ss_dssp CCEEEEETTSCEEEECTTCCEEEEECC--CSSCEEEEEECSSSTTEEEEEETTS------------CEEEEECCC-
T ss_pred eEEEEEeCCCeEEEEECCCCcEEEEcC--CCCCEEEEEEeCCCCeEEEEEcCCC------------eEEEEECCCC
Confidence 3444332 678888877644332111 1111122222 2446777777542 4677888765
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.59 E-value=2.3 Score=37.45 Aligned_cols=88 Identities=9% Similarity=-0.094 Sum_probs=46.4
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEec--cCCccC-CcEEE--EcCe
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVE--DYGWLQ-GPMAI--VHDS 221 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~--~~~~~~-~~~~~--~~~~ 221 (317)
.+.+||..+++....-..... ......+.+ ++++++.|+....+..||+.+.+-... ...... ...+. -+++
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVH-PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTC-CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred EEEEEECCCCCccEEEecCCC-CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 456677766654322100111 112222322 677777777667899999988763322 111111 12222 2567
Q ss_pred EEEEe-----CcEEEEecCCc
Q 021080 222 VYLMS-----HGLIIKQHRDV 237 (317)
Q Consensus 222 ly~~g-----~~~~~~yd~~~ 237 (317)
+++.+ .+.+..||...
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTB
T ss_pred EEEEeccCCCCceEEEEcCcc
Confidence 77776 36888898776
No 115
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.58 E-value=6 Score=33.87 Aligned_cols=132 Identities=7% Similarity=-0.065 Sum_probs=64.9
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEe-ccCCccCCcEEEE--cCeEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQGPMAIV--HDSVYL 224 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~--~~~ly~ 224 (317)
..+.+||..+.+-...-.-+.. .....+..-++++++.|+....+..||..+..-.. +.........+.. ++.+++
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 242 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEE
Confidence 4577788877654322111111 11111122266778888767789999998765321 1111111111122 455555
Q ss_pred EeC--cEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 225 MSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 225 ~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.++ +.+..||...-+.+..............+.+ ++++++.|+.+ ..|.+||..+.
T Consensus 243 s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d------------~~i~vwd~~~~ 302 (340)
T 1got_B 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD------------FNCNVWDALKA 302 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT------------SEEEEEETTTC
T ss_pred EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC------------CeEEEEEcccC
Confidence 554 6788888776333322221011111222222 56777776632 25778887655
No 116
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.56 E-value=6.6 Score=34.33 Aligned_cols=23 Identities=9% Similarity=-0.075 Sum_probs=17.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG 202 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~ 202 (317)
+++.++.|+....+..||..+.+
T Consensus 192 ~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 192 RGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp TTTEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEcCCCcEEEeECCCCc
Confidence 56666677756678899988765
No 117
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=91.54 E-value=4.4 Score=32.29 Aligned_cols=55 Identities=7% Similarity=0.040 Sum_probs=38.2
Q ss_pred ECCEEEEEecCceeEEEEeCCCCc------------EEeccCCccCCcEEEEcCeEEEEeCcEEEEecCCc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLG------------WTVEDYGWLQGPMAIVHDSVYLMSHGLIIKQHRDV 237 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~------------W~~~~~~~~~~~~~~~~~~ly~~g~~~~~~yd~~~ 237 (317)
.+|++|++-| +..++||..+++ |.-++.. -.++...++.+|++.|+..+.|+..+
T Consensus 108 ~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~--idaa~~~~g~~Yffkg~~y~~~~~~~ 174 (195)
T 1itv_A 108 GRGKMLLFSG--RRLWRFDVKAQMVDPRSASEVDRMFPGVPLD--THDVFQFREKAYFCQDRFYWRVSSRS 174 (195)
T ss_dssp STTEEEEEET--TEEEEEETTTTEECGGGCEEHHHHSTTSCSS--CSEEEEETTEEEEEETTEEEEEECCT
T ss_pred CCCeEEEEeC--CEEEEEeCCcccccCCCccChhhcCCCCCCC--CCEEEEeCCeEEEEeCCEEEEEECCc
Confidence 4789999966 568999987754 2222110 12333457899999999999999765
No 118
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=91.38 E-value=0.06 Score=50.84 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.9
Q ss_pred CCCcHHHHHHHhccC-CCCchhhhhhcCHhHHHh
Q 021080 6 EGLPDAVALRCLARV-PFFLHPKLELVSRSWRAA 38 (317)
Q Consensus 6 ~~Lp~d~~~~~l~r~-p~~~~~~~~~v~k~w~~l 38 (317)
+.||||++.+||+++ +.++..+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 469999999999999 899999999999999987
No 119
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.36 E-value=5.3 Score=32.89 Aligned_cols=183 Identities=6% Similarity=0.049 Sum_probs=93.5
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEE-eCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
+..+|+... ....+..||+. ++.......... ..-.+++. -++.+|+.....
T Consensus 25 ~g~l~v~~~-~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~---------------------- 77 (299)
T 2z2n_A 25 KGKVWITQH-KANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTENAA---------------------- 77 (299)
T ss_dssp TSCEEEEET-TTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEETTT----------------------
T ss_pred CCCEEEEec-CCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeCCCC----------------------
Confidence 455666542 23578999998 777654321111 12233433 356788875421
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCCc-
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW- 210 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~- 210 (317)
..+.+||+. ++.+.+. ++.. ......+.. +|++|+.......+..||+ ++.........
T Consensus 78 --------------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 78 --------------NKIGRITKK-GIIKEYT-LPNP-DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp --------------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred --------------CeEEEECCC-CcEEEEe-CCCc-CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 223444443 2332221 1111 112233333 5789987654567999999 66555442211
Q ss_pred -c-CCcEEEE-cCeEEEEeC--cEEEEecCCc-eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcc
Q 021080 211 -L-QGPMAIV-HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSD 283 (317)
Q Consensus 211 -~-~~~~~~~-~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 283 (317)
. ...++.- ++++|+... +.++.+|+.. ..... .+. ......+++.. +++||+.... .+.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~-~~~-~~~~~~~i~~~~~g~l~v~~~~------------~~~ 205 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFK-IPT-PASGPVGITKGNDDALWFVEII------------GNK 205 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEE-CSS-TTCCEEEEEECTTSSEEEEETT------------TTE
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEee-CCC-CCCcceeEEECCCCCEEEEccC------------Cce
Confidence 1 1222222 578998873 7899999844 54432 121 11112233333 5678876431 235
Q ss_pred eeEeecCCCCCceeec
Q 021080 284 VDVLTVGAERPTWRQV 299 (317)
Q Consensus 284 v~~yd~~~~~~~W~~~ 299 (317)
+.+||+ ++ +...+
T Consensus 206 i~~~~~-~g--~~~~~ 218 (299)
T 2z2n_A 206 IGRITT-SG--EITEF 218 (299)
T ss_dssp EEEECT-TC--CEEEE
T ss_pred EEEECC-CC--cEEEE
Confidence 777887 55 55443
No 120
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=91.32 E-value=6.1 Score=33.49 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=32.0
Q ss_pred cCeEEEEeC--cEEEEecCCc-eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 219 HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 219 ~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+++.++.++ +.+..||... .+.+..+..... .-..+... +++.++.|+.+ ..+.+||+.+.
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~ 250 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK-SISDMQFSPDLTYFITSSRD------------TNSFLVDVSTL 250 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS-CEEEEEECTTSSEEEEEETT------------SEEEEEETTTC
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC-ceeEEEECCCCCEEEEecCC------------ceEEEEECCCC
Confidence 344444443 7889999876 555544432111 11222222 55666666422 25778888766
No 121
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.24 E-value=3.3 Score=34.94 Aligned_cols=63 Identities=8% Similarity=0.105 Sum_probs=40.3
Q ss_pred EECCEEEEEecCceeEEEEeCC-CCcEEeccCCccCCcEEEE-cCeEEEEeC-cEEEEecCCc---eEEE
Q 021080 178 VIGGKVHVLHKGLSTVQVLDHM-GLGWTVEDYGWLQGPMAIV-HDSVYLMSH-GLIIKQHRDV---RKVV 241 (317)
Q Consensus 178 ~~~g~lyv~gG~~~~v~~yd~~-~~~W~~~~~~~~~~~~~~~-~~~ly~~g~-~~~~~yd~~~---W~~v 241 (317)
+.++.||+... ...+.+||+. ...|............+.. ++.+|+... +.++.||++. |+.-
T Consensus 105 ~~~~~l~v~t~-~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~ 173 (330)
T 3hxj_A 105 IFEDILYVTSM-DGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK 173 (330)
T ss_dssp EETTEEEEECT-TSEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEE
T ss_pred EECCEEEEEec-CCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe
Confidence 34888887542 4568999987 3347655433222233333 778888765 7899999764 7654
No 122
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.16 E-value=5.3 Score=38.62 Aligned_cols=58 Identities=5% Similarity=-0.197 Sum_probs=30.6
Q ss_pred CCEEEEEecCceeEEEEeCCCC-cEEec-cCCccCCcEEEE---cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGL-GWTVE-DYGWLQGPMAIV---HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~-~W~~~-~~~~~~~~~~~~---~~~ly~~g~--~~~~~yd~~~ 237 (317)
+++..+.|+....+..||..++ ..... .........+.. ++.+++.++ +.+..||...
T Consensus 108 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 5656666665677888998765 22211 111111111222 344555543 7788888654
No 123
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.12 E-value=7.7 Score=34.29 Aligned_cols=55 Identities=15% Similarity=0.006 Sum_probs=29.3
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGW 203 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W 203 (317)
..+.+||..+++-...-.-+.. ........-++.+++.|+....+..||..+..-
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHRE-WVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CeEEEEECCCCcEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 4667777776653221000111 111111123567777777667788898877654
No 124
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.06 E-value=3.5 Score=38.44 Aligned_cols=78 Identities=15% Similarity=0.078 Sum_probs=38.8
Q ss_pred CCCcC--CCCcHHHHHHHhccCCCCc----hhhhhhcCHhHHHhhcChhhHHHHHhcC-CcCceEEEEEeCCCCceEEEe
Q 021080 1 MSELI--EGLPDAVALRCLARVPFFL----HPKLELVSRSWRAAIRSPELFKARQEVG-SSENLLCVCAFDPENLWQLYD 73 (317)
Q Consensus 1 ~~~~~--~~Lp~d~~~~~l~r~p~~~----~~~~~~v~k~w~~l~~s~~~~~~~~~~~-~~~~~l~v~gg~~~~~~~~yd 73 (317)
||..- ..|.++=+..+...+-... -..+..+.+.|..+..-...+.. ..+. ..++.+|+.+.. ...+..+|
T Consensus 88 Mp~~~~~~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~-~~~~~~p~~~~~vs~~~-d~~V~v~D 165 (543)
T 1nir_A 88 MPNWGSSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKK-QLNDLDLPNLFSVTLRD-AGQIALVD 165 (543)
T ss_dssp CCCSTTTTSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSS-CCSCCCGGGEEEEEEGG-GTEEEEEE
T ss_pred CCCcccccCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCcc-cccccCCCCEEEEEEcC-CCeEEEEE
Confidence 55543 5688888777666543211 12223334444433211100100 0111 125677776643 36788999
Q ss_pred CCCCCEe
Q 021080 74 PLRDLWI 80 (317)
Q Consensus 74 ~~~~~W~ 80 (317)
..+++-.
T Consensus 166 ~~t~~~~ 172 (543)
T 1nir_A 166 GDSKKIV 172 (543)
T ss_dssp TTTCCEE
T ss_pred CCCceEE
Confidence 9888754
No 125
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.98 E-value=4.5 Score=35.05 Aligned_cols=61 Identities=8% Similarity=-0.061 Sum_probs=33.1
Q ss_pred EEEEEecCceeEEEEeCCCCcEE-eccCCccCCcE--EEE---cCeEEEEeC--cEEEEecCCceEEEe
Q 021080 182 KVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPM--AIV---HDSVYLMSH--GLIIKQHRDVRKVVA 242 (317)
Q Consensus 182 ~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~--~~~---~~~ly~~g~--~~~~~yd~~~W~~v~ 242 (317)
.+++.|+....+..||..+.+-. .+......... +.. ++++++.+. +.+..||..+.+.+.
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL 251 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE
T ss_pred CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE
Confidence 46777776677899999877532 22211111111 111 456666654 678888887644333
No 126
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.76 E-value=3.8 Score=35.73 Aligned_cols=98 Identities=8% Similarity=-0.011 Sum_probs=50.1
Q ss_pred EEEEEecCce---eEEEEeCCCCc--EEecc-CCccCCcEEEE---cCeEEEEeC--cEEEEecCCceEEEecccccccc
Q 021080 182 KVHVLHKGLS---TVQVLDHMGLG--WTVED-YGWLQGPMAIV---HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRR 250 (317)
Q Consensus 182 ~lyv~gG~~~---~v~~yd~~~~~--W~~~~-~~~~~~~~~~~---~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r 250 (317)
.+++.++... .+..||..+.. -..+. ........... ++.+++.++ +.+..||.++.+.+..+......
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 307 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW 307 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc
Confidence 4666666444 79999998753 11121 11111112222 455555553 78999998775555444321111
Q ss_pred ccEEEEEE-CC-eEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 IGFAMIGM-GD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 ~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
. ..+... ++ ++++.|+.+ ..|.+||+.+.
T Consensus 308 v-~~~~~s~~~~~~l~s~~~d------------~~i~iw~~~~~ 338 (416)
T 2pm9_A 308 C-FKTKFAPEAPDLFACASFD------------NKIEVQTLQNL 338 (416)
T ss_dssp C-CCEEECTTCTTEEEECCSS------------SEEEEEESCCC
T ss_pred e-EEEEECCCCCCEEEEEecC------------CcEEEEEccCC
Confidence 1 122222 34 677777643 24667777665
No 127
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.71 E-value=2.8 Score=36.37 Aligned_cols=100 Identities=7% Similarity=-0.063 Sum_probs=51.8
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCc------cCCcEEEE---cCe-EEEEeCcEEEEecCCceEEEeccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGW------LQGPMAIV---HDS-VYLMSHGLIIKQHRDVRKVVASASEFRR 249 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~------~~~~~~~~---~~~-ly~~g~~~~~~yd~~~W~~v~~~~~~~~ 249 (317)
+++..+.|+....+..||..+..-....... ........ .+. ++...++.+..||..+.+.+..+.....
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 6667777776677999999876532211100 01111111 122 3333457888898877555544432111
Q ss_pred cccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 250 RIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 250 r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.. ..+... ++++++.|+.++ .|.+||+++.
T Consensus 336 ~v-~~~~~s~~~~~l~s~~~dg------------~i~iw~~~~~ 366 (408)
T 4a11_B 336 TV-DCCVFQSNFQELYSGSRDC------------NILAWVPSLY 366 (408)
T ss_dssp CE-EEEEEETTTTEEEEEETTS------------CEEEEEECC-
T ss_pred eE-EEEEEcCCCCEEEEECCCC------------eEEEEeCCCC
Confidence 11 222222 567777776432 5677888765
No 128
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.36 E-value=6.7 Score=32.29 Aligned_cols=177 Identities=7% Similarity=-0.002 Sum_probs=91.0
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.+|+... ....+..||+. ++..... ++.. ...-..++.. ++.+|+.....
T Consensus 72 ~g~l~v~~~-~~~~v~~~d~~-g~~~~~~-~~~~--~~~~~~i~~~~~g~l~v~~~~~---------------------- 124 (300)
T 2qc5_A 72 LGDIWFTEN-GANKIGKLSKK-GGFTEYP-LPQP--DSGPYGITEGLNGDIWFTQLNG---------------------- 124 (300)
T ss_dssp TSCEEEEET-TTTEEEEECTT-SCEEEEE-CSST--TCCEEEEEECSTTCEEEEETTT----------------------
T ss_pred CCCEEEEec-CCCeEEEECCC-CCeEEec-CCCC--CCCCccceECCCCCEEEEccCC----------------------
Confidence 455666542 23568899988 7765442 2211 1222334433 57788875421
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCCcc
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL 211 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~ 211 (317)
..+.+||+. .+..... ++.. ......+.. +|++|+.......+.+||+ +++...+.....
T Consensus 125 --------------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~ 186 (300)
T 2qc5_A 125 --------------DRIGKLTAD-GTIYEYD-LPNK-GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTN 186 (300)
T ss_dssp --------------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred --------------CeEEEECCC-CCEEEcc-CCCC-CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCC
Confidence 234445554 3333221 1111 112233333 5788887654567999999 666655432111
Q ss_pred ---CCcEEEE-cCeEEEEeC--cEEEEecCCc-eEEEeccccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcc
Q 021080 212 ---QGPMAIV-HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSD 283 (317)
Q Consensus 212 ---~~~~~~~-~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~ 283 (317)
+..++.- ++.+|+... +.+..|++.. ...... +. ....-.+++.. +|+||+.... .+.
T Consensus 187 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~-~~-~~~~~~~i~~d~~g~l~v~~~~------------~~~ 252 (300)
T 2qc5_A 187 AAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDI-PT-PNARPHAITAGKNSEIWFTEWG------------ANQ 252 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEEC-SS-TTCCEEEEEECSTTCEEEEETT------------TTE
T ss_pred CCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEEC-CC-CCCCceEEEECCCCCEEEeccC------------CCe
Confidence 1122222 578999874 6899999854 554421 21 11112233333 5688886521 135
Q ss_pred eeEeecC
Q 021080 284 VDVLTVG 290 (317)
Q Consensus 284 v~~yd~~ 290 (317)
|.+||++
T Consensus 253 i~~~~~~ 259 (300)
T 2qc5_A 253 IGRITND 259 (300)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 6777773
No 129
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.30 E-value=4.4 Score=34.92 Aligned_cols=22 Identities=9% Similarity=-0.150 Sum_probs=15.4
Q ss_pred CCEEEEEecCceeEEEEeCCCC
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~ 201 (317)
++++.+.|+....+..||..+.
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCS
T ss_pred CCCEEEEEeCCCEEEEEEEEec
Confidence 5667777775667888887543
No 130
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.17 E-value=6.7 Score=32.02 Aligned_cols=116 Identities=10% Similarity=0.060 Sum_probs=63.6
Q ss_pred CCceeeCCCCCc--cCCCceEEEE-ECCEEEEEecCceeEEEEeCCC----CcEEe----ccCCcc---------CCcEE
Q 021080 157 KDVWVPIPDLHR--THNSACTGVV-IGGKVHVLHKGLSTVQVLDHMG----LGWTV----EDYGWL---------QGPMA 216 (317)
Q Consensus 157 t~~W~~~~~~p~--~~r~~~~~~~-~~g~lyv~gG~~~~v~~yd~~~----~~W~~----~~~~~~---------~~~~~ 216 (317)
+..|..++.-+- . ...+ +.. .+|++|++-| +..++||..+ +.... +...++ ...+|
T Consensus 46 ~~~Wp~LP~~~f~~~-~iDA-a~~~~~g~~~fFkg--~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA 121 (225)
T 3oyo_A 46 SSGFPSLAGTPFAEP-GIDC-SFHTEASEAYVFSG--NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSA 121 (225)
T ss_dssp HHHCGGGTTSTTTTT-CCSE-EEECSTTEEEEEET--TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEE
T ss_pred hhhcccCCCccCCCC-CEeE-EEEcCCCeEEEEcC--CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceE
Confidence 456777764322 2 2222 222 5899999976 5688886532 21111 111111 23344
Q ss_pred EE---cCeEEEEeCcEEEEecCCc--eE----EEe-ccccc-----cccccEEEEE-ECCeEEEEeCcccCCCCceeccc
Q 021080 217 IV---HDSVYLMSHGLIIKQHRDV--RK----VVA-SASEF-----RRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKP 280 (317)
Q Consensus 217 ~~---~~~ly~~g~~~~~~yd~~~--W~----~v~-~~~~~-----~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~ 280 (317)
.. ++++|++.|+..+.||... -. .+. ..|.. ......++.. .++++|++-|
T Consensus 122 ~~~~~~gk~yfFkG~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG------------- 188 (225)
T 3oyo_A 122 FRSTKGKEVYLFKGNKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG------------- 188 (225)
T ss_dssp EECSSTTEEEEEETTEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------------
T ss_pred EEECCCCcEEEEeCCeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------------
Confidence 33 6899999999999999544 11 111 22211 1223333332 3789999977
Q ss_pred CcceeEeecC
Q 021080 281 MSDVDVLTVG 290 (317)
Q Consensus 281 ~~~v~~yd~~ 290 (317)
+..|.||..
T Consensus 189 -~~ywr~d~~ 197 (225)
T 3oyo_A 189 -QNYVRIDFT 197 (225)
T ss_dssp -TEEEEEECC
T ss_pred -CEEEEEeCC
Confidence 256788887
No 131
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.06 E-value=7.1 Score=32.13 Aligned_cols=165 Identities=8% Similarity=0.089 Sum_probs=85.6
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.+|+... ....+..||+. ++...+. ++.. ...-.+++.. ++.+|+.....
T Consensus 30 ~g~l~v~~~-~~~~v~~~~~~-~~~~~~~-~~~~--~~~~~~i~~~~~g~l~v~~~~~---------------------- 82 (300)
T 2qc5_A 30 DGKVWFTQH-KANKISSLDQS-GRIKEFE-VPTP--DAKVMCLIVSSLGDIWFTENGA---------------------- 82 (300)
T ss_dssp TSCEEEEET-TTTEEEEECTT-SCEEEEE-CSST--TCCEEEEEECTTSCEEEEETTT----------------------
T ss_pred CCCEEEEcC-CCCeEEEECCC-CceEEEE-CCCC--CCcceeEEECCCCCEEEEecCC----------------------
Confidence 456777543 23678899988 7766542 2211 0122333332 46788875421
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCC--
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYG-- 209 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~-- 209 (317)
..+.+||+. +++.... ++.. ......+.. +|++|+.......+..||+. ++.......
T Consensus 83 --------------~~v~~~d~~-g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~ 144 (300)
T 2qc5_A 83 --------------NKIGKLSKK-GGFTEYP-LPQP-DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK 144 (300)
T ss_dssp --------------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred --------------CeEEEECCC-CCeEEec-CCCC-CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCC
Confidence 234555655 4444321 1111 112223333 68899886545679999998 665543211
Q ss_pred cc-CCcEEE-EcCeEEEEe--CcEEEEecCCc-eEEEeccccccccccEEEEEE-CCeEEEEe
Q 021080 210 WL-QGPMAI-VHDSVYLMS--HGLIIKQHRDV-RKVVASASEFRRRIGFAMIGM-GDDIYVIG 266 (317)
Q Consensus 210 ~~-~~~~~~-~~~~ly~~g--~~~~~~yd~~~-W~~v~~~~~~~~r~~~~~~~~-~~~lyv~G 266 (317)
.. +..++. -++++|+.. .+.++.|++.. ...+. .+. ......+++.. ++.||+..
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~-~~~-~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYP-LPT-NAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEE-CSS-TTCCEEEEEECTTSSEEEEE
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEee-CCC-CCCCcceEEECCCCCEEEEc
Confidence 11 122222 257899887 47899999854 55442 221 11122233333 56788764
No 132
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.05 E-value=2.9 Score=34.93 Aligned_cols=84 Identities=11% Similarity=0.159 Sum_probs=48.6
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEeccCCcc------CCcEEE-Ec
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL------QGPMAI-VH 219 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~------~~~~~~-~~ 219 (317)
.+.+||+.++ .+.+.. +.. ...++. -+|++|+.......+..||+.+++...+..... ...++. -+
T Consensus 51 ~i~~~~~~~~-~~~~~~-~~~---~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 51 RTWAWSDDGQ-LSPEMH-PSH---HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp EEEEEETTSC-EEEEES-SCS---SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred EEEEEECCCC-eEEEEC-CCC---CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence 4556666665 433321 111 222333 368888876545679999998888765532211 112332 26
Q ss_pred CeEEEEe-------------------CcEEEEecCCc
Q 021080 220 DSVYLMS-------------------HGLIIKQHRDV 237 (317)
Q Consensus 220 ~~ly~~g-------------------~~~~~~yd~~~ 237 (317)
|++|+.+ .+.++.++++.
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g 162 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG 162 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCCC
Confidence 7899863 24899998864
No 133
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.04 E-value=4.5 Score=36.08 Aligned_cols=89 Identities=9% Similarity=-0.005 Sum_probs=43.3
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceE-EEEECCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--c-CeEEE
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACT-GVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--H-DSVYL 224 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~-~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~-~~ly~ 224 (317)
.+.+||.+++.-..+...........+ ...-++++++.|+....+..||.....-..+.........+.. + +.+++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEE
Confidence 455667666654443222111011112 2234677888888677899999876542222211111111222 2 33554
Q ss_pred EeC--cEEEEecCCc
Q 021080 225 MSH--GLIIKQHRDV 237 (317)
Q Consensus 225 ~g~--~~~~~yd~~~ 237 (317)
.++ +.+..||...
T Consensus 268 s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 268 TASVDQTVKIWDLRQ 282 (435)
T ss_dssp EEETTSBCCEEETTT
T ss_pred EecCcceeeEEeccc
Confidence 443 5677777654
No 134
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.00 E-value=8.8 Score=33.13 Aligned_cols=133 Identities=9% Similarity=-0.081 Sum_probs=67.6
Q ss_pred CCceEEEeCCCCCEeecCCCCccccccCC-eeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCC
Q 021080 66 ENLWQLYDPLRDLWITLPVLPSKIRHLAH-FGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTS 142 (317)
Q Consensus 66 ~~~~~~yd~~~~~W~~~~~~p~~~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~ 142 (317)
...+..||..+.+.......... ... .++... ++.+++.|+.+
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d------------------------------- 140 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGP---GDAITGMKFNQFNTNQLFVSSIR------------------------------- 140 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCST---TCBEEEEEEETTEEEEEEEEETT-------------------------------
T ss_pred CCeEEEEeCCCcccceeeecCCc---CCceeEEEeCCCCCCEEEEEeCC-------------------------------
Confidence 35788999988776654333211 122 233333 34666666542
Q ss_pred CcCCCceeEEeeCCCCceeeCCCCCcc-CCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--c
Q 021080 143 CRKSISQAEMYDPEKDVWVPIPDLHRT-HNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--H 219 (317)
Q Consensus 143 ~~~~~~~~~~yd~~t~~W~~~~~~p~~-~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~ 219 (317)
..+.+||..++....+...... ......+..-++++.+.|+....+..||+....-..+.........+.. +
T Consensus 141 -----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 141 -----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp -----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSS
T ss_pred -----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCC
Confidence 3455667666555444322211 0111222233567777777677899999865544433322111111222 3
Q ss_pred Ce-EEEEeC--cEEEEecCCc
Q 021080 220 DS-VYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 220 ~~-ly~~g~--~~~~~yd~~~ 237 (317)
+. +++.++ +.+..||..+
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCEEEEEeCCC
Confidence 33 555543 6788888654
No 135
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.86 E-value=4.7 Score=39.00 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=50.1
Q ss_pred CCEEEEEec-CceeEEEEeCCCCcEEecc-C-CccCCcEEEE--cCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHK-GLSTVQVLDHMGLGWTVED-Y-GWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG-~~~~v~~yd~~~~~W~~~~-~-~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
++.||+..- ....|+++++....-..+. . +..+..+++- +++||+.+. ..|..++.+. -+.+..... ...
T Consensus 507 ~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~-~~~ 585 (699)
T 1n7d_A 507 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLA 585 (699)
T ss_dssp SSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS-SCS
T ss_pred CCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCC-cCC
Confidence 678888753 2357888887544332221 1 1113344442 579999986 6899998765 334332211 112
Q ss_pred ccEEEEEECCeEEEEe
Q 021080 251 IGFAMIGMGDDIYVIG 266 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~G 266 (317)
...+++..+++||+.-
T Consensus 586 ~P~glavd~~~lywtd 601 (699)
T 1n7d_A 586 HPFSLAVFEDKVFWTD 601 (699)
T ss_dssp SCCCCEEETTEEEEEC
T ss_pred CceEeEEECCEEEEEe
Confidence 3345667788999886
No 136
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.75 E-value=2.6 Score=36.69 Aligned_cols=98 Identities=6% Similarity=-0.098 Sum_probs=48.9
Q ss_pred EEEEEecCceeEEEEeCCCCcEEeccCCcc-CC--cEEEE---cCeEEEEeC--cEEEEecCCceEEEeccccccccccE
Q 021080 182 KVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QG--PMAIV---HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 253 (317)
Q Consensus 182 ~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~-~~--~~~~~---~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~ 253 (317)
.+++.++....+..||..+.+-...-.... .. ..+.. ++.+++.+. +.+..||....+.+..+.. ....-.
T Consensus 195 ~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~v~ 273 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQNIT 273 (357)
T ss_dssp SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSSCEE
T ss_pred ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec-cceeEE
Confidence 466677656678899988765332211111 11 11222 355666654 6788888776332222221 011111
Q ss_pred EEEE--ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 254 AMIG--MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 254 ~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.++. .++++++.|+.+ ..|.+||.+++
T Consensus 274 ~l~~sp~~~~~lasgs~D------------~~i~iwd~~~~ 302 (357)
T 4g56_B 274 GLAYSYHSSPFLASISED------------CTVAVLDADFS 302 (357)
T ss_dssp EEEECSSSSCCEEEEETT------------SCEEEECTTSC
T ss_pred EEEEcCCCCCEEEEEeCC------------CEEEEEECCCC
Confidence 2222 133555555532 25778888776
No 137
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.75 E-value=2.8 Score=40.71 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=51.4
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE--C--CEEEEEecCceeEEEEeCCCCcEEeccCCcc-CCcE--EEE--
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPM--AIV-- 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~--g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~-~~~~--~~~-- 218 (317)
..+.+||..++++..+..+... ...-..+.+ + +.+.+.|+....+..||..++.|..+..... ...+ +..
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred CcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence 3566777776666655444332 222333333 3 6777777766789999999988765543332 1111 222
Q ss_pred c--CeEEEEeC--cEEEEecCCc
Q 021080 219 H--DSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 219 ~--~~ly~~g~--~~~~~yd~~~ 237 (317)
+ +.+++.++ +.+..||...
T Consensus 110 ~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 110 HEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp GGGCSEEEEEETTSEEEEEECCS
T ss_pred CCCCCEEEEEeCCCcEEEEEeec
Confidence 2 55555554 6788887654
No 138
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.56 E-value=3.4 Score=42.35 Aligned_cols=130 Identities=9% Similarity=-0.014 Sum_probs=64.6
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEe-ccCCccC-CcEEE-EcCeEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQ-GPMAI-VHDSVYL 224 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~~~~~-~~~~~-~~~~ly~ 224 (317)
..+.+||..+++...+...... -.......+..++.++....+..||..+++-.. +...... ..++. -++++++
T Consensus 1025 g~i~vwd~~~~~~~~~~~~~~~---v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 1101 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYVFLQAHQET---VKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFS 1101 (1249)
T ss_dssp SBEEEEETTTTEEECCBCCSSC---EEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCE
T ss_pred CEEEEEECCCCceEEEecCCCc---EEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEE
Confidence 3567788877776544322211 222333333344556656789999998765221 1111111 12222 2445555
Q ss_pred EeC--cEEEEecCCceEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 225 MSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 225 ~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.++ +.+..||....+.+..+.............-++++++.|+.++ .|.+||+.++
T Consensus 1102 s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg------------~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1102 STSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG------------EIRIWNVSDG 1159 (1249)
T ss_dssp EECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTS------------CCCEEESSSS
T ss_pred EEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCC------------EEEEEECCCC
Confidence 544 5677787766443333331011111112223677777776432 4678888876
No 139
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.51 E-value=9.6 Score=32.86 Aligned_cols=89 Identities=8% Similarity=-0.129 Sum_probs=44.9
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCc--EEEE--cCeEEEEeC--cEEEEecCCceEEEecccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGP--MAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIG 252 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~--~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~ 252 (317)
++..++.|+....+..||+.++.-... ........ .+.. ++++.+.++ +.+..||..+.+.+..+..-....
T Consensus 251 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v- 329 (354)
T 2pbi_B 251 SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV- 329 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE-
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE-
Confidence 567777777667789999887642221 11111111 1222 455555553 678888876644443332101111
Q ss_pred EEEEE-ECCeEEEEeCcc
Q 021080 253 FAMIG-MGDDIYVIGGVI 269 (317)
Q Consensus 253 ~~~~~-~~~~lyv~GG~~ 269 (317)
..+.. -+++.++.|+.+
T Consensus 330 ~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 330 STLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEEEECTTSSCEEEEETT
T ss_pred EEEEECCCCCEEEEEcCC
Confidence 12222 256666666643
No 140
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.51 E-value=11 Score=33.36 Aligned_cols=84 Identities=20% Similarity=0.245 Sum_probs=51.6
Q ss_pred CCEEEEEecCc-eeEEEEeCCCCcEEec-cCCcc-CCcEEE--EcCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHKGL-STVQVLDHMGLGWTVE-DYGWL-QGPMAI--VHDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG~~-~~v~~yd~~~~~W~~~-~~~~~-~~~~~~--~~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
++.||+.--.. ..|+++++....-..+ ..... +..++. .+++||+.+. +.|+.++.+. -+.+.... ..
T Consensus 213 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~---~~ 289 (386)
T 3v65_B 213 EGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LP 289 (386)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS---CS
T ss_pred CCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC---CC
Confidence 68999986533 7899999875543332 22111 233444 3789999986 6899998764 23232211 11
Q ss_pred ccEEEEEECCeEEEEe
Q 021080 251 IGFAMIGMGDDIYVIG 266 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~G 266 (317)
.-.+++..++.||+..
T Consensus 290 ~P~giav~~~~ly~td 305 (386)
T 3v65_B 290 HPFAITVFEDSLYWTD 305 (386)
T ss_dssp SEEEEEEETTEEEEEE
T ss_pred CceEEEEECCEEEEee
Confidence 2345666889999885
No 141
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.45 E-value=16 Score=35.32 Aligned_cols=141 Identities=8% Similarity=-0.044 Sum_probs=76.2
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEec
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYD 134 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d 134 (317)
++.|+|... .-+..||+.++++........ ..-.++...++.|+|...
T Consensus 73 ~g~lWigT~---~Gl~~yd~~~~~f~~~~~~~~----~~i~~i~~~~g~lWigt~------------------------- 120 (758)
T 3ott_A 73 NTYLYMGTD---NGILVYNYRADRYEQPETDFP----TDVRTMALQGDTLWLGAL------------------------- 120 (758)
T ss_dssp TTEEEEEET---TEEEEEETTTTEECCCSCCCC----SCEEEEEEETTEEEEEET-------------------------
T ss_pred CCcEEEEeC---CCeEEEeCCCCEEECcccCCC----ceEEEEEecCCcEEEEcC-------------------------
Confidence 456776542 467899999987765211110 111223344677776432
Q ss_pred ccCCCCCCCcCCCceeEEeeCCCCceeeCC----CCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccC
Q 021080 135 PVTRGFTSCRKSISQAEMYDPEKDVWVPIP----DLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY 208 (317)
Q Consensus 135 ~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~----~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~ 208 (317)
..+.+||+.+++.+... .++.. ....+.. +|.|++.. ..-+.+||+.++++.....
T Consensus 121 -------------~Gl~~~~~~~~~~~~~~~~~~~l~~~---~i~~i~~d~~g~lWigt--~~Gl~~~~~~~~~~~~~~~ 182 (758)
T 3ott_A 121 -------------NGLYTYQLQSRKLTSFDTRRNGLPNN---TIYSIIRTKDNQIYVGT--YNGLCRYIPSNGKFEGIPL 182 (758)
T ss_dssp -------------TEEEEEETTTCCEEEECHHHHCCSCS---CEEEEEECTTCCEEEEE--TTEEEEEETTTTEEEEECC
T ss_pred -------------CcceeEeCCCCeEEEeccCCCCcCCC---eEEEEEEcCCCCEEEEe--CCCHhhCccCCCceEEecC
Confidence 23556777666665542 12222 1122222 67788753 2458899999988876542
Q ss_pred Ccc----CCcE---EEE--cCeEEEEeCcEEEEecCCc--eEEEeccc
Q 021080 209 GWL----QGPM---AIV--HDSVYLMSHGLIIKQHRDV--RKVVASAS 245 (317)
Q Consensus 209 ~~~----~~~~---~~~--~~~ly~~g~~~~~~yd~~~--W~~v~~~~ 245 (317)
... ...+ ..- ++.|++...+.++.|++++ ++....++
T Consensus 183 ~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~ 230 (758)
T 3ott_A 183 PVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFH 230 (758)
T ss_dssp CCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCC
Confidence 211 1111 111 2347776556789999765 66554433
No 142
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.36 E-value=14 Score=35.65 Aligned_cols=139 Identities=12% Similarity=0.051 Sum_probs=73.9
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEE-eCCEEEEEcCcCCCCCCCCCCCCCcccccceeEe
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS-TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSY 133 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 133 (317)
++.|+++++.. .-+.+||+.++++..+..-... ....-.++.. -++.|++...
T Consensus 482 ~g~lWi~~~t~-~Gl~~~d~~~~~~~~~~~~~~~-~~~~~~~i~~d~~g~lWigt~------------------------ 535 (758)
T 3ott_A 482 EGNVWVLLYNN-KGIDKINPRTREVTKLFADELT-GEKSPNYLLCDEDGLLWVGFH------------------------ 535 (758)
T ss_dssp TSCEEEEETTC-SSEEEEETTTTEEEEECTTTSC-GGGCEEEEEECTTSCEEEEET------------------------
T ss_pred CCCEEEEccCC-CCcEEEeCCCCceEEecCCCcC-CCcccceEEECCCCCEEEEec------------------------
Confidence 45577654432 5688999999988876321110 0011122222 2456775431
Q ss_pred cccCCCCCCCcCCCceeEEeeCCCCceeeCC--CCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc
Q 021080 134 DPVTRGFTSCRKSISQAEMYDPEKDVWVPIP--DLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL 211 (317)
Q Consensus 134 d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~ 211 (317)
.-+.+||+.+++++... .++.. . -.+.+.-+|.|++.+ ..-+.+||+.+.+.........
T Consensus 536 --------------~Gl~~~~~~~~~~~~~~~~gl~~~-~-i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~~~ 597 (758)
T 3ott_A 536 --------------GGVMRINPKDESQQSISFGSFSNN-E-ILSMTCVKNSIWVST--TNGLWIIDRKTMDARQQNMTNK 597 (758)
T ss_dssp --------------TEEEEECC--CCCCBCCCCC---C-C-EEEEEEETTEEEEEE--SSCEEEEETTTCCEEEC--CCC
T ss_pred --------------CceEEEecCCCceEEecccCCCcc-c-eEEEEECCCCEEEEC--CCCeEEEcCCCceeEEecCCCC
Confidence 12456666666665542 33332 1 223344588888874 3568999999988765431111
Q ss_pred CCcEEE-E--cCeEEEEeCcEEEEecCCc
Q 021080 212 QGPMAI-V--HDSVYLMSHGLIIKQHRDV 237 (317)
Q Consensus 212 ~~~~~~-~--~~~ly~~g~~~~~~yd~~~ 237 (317)
....+. . +|.||+-+.+.+..|+|+.
T Consensus 598 ~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 598 RFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp CCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred ceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 112222 2 6788887778888888865
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.24 E-value=8.9 Score=32.13 Aligned_cols=56 Identities=5% Similarity=-0.092 Sum_probs=30.6
Q ss_pred CEEEEEecCceeEEEEeCCC-CcEEecc-----CCcc-CCcEEEE--cC-eEEEEeC--cEEEEecCC
Q 021080 181 GKVHVLHKGLSTVQVLDHMG-LGWTVED-----YGWL-QGPMAIV--HD-SVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~-~~W~~~~-----~~~~-~~~~~~~--~~-~ly~~g~--~~~~~yd~~ 236 (317)
..+|+.+.....+..||..+ ++..... .... ....... ++ .+|+.+. +.+..|+.+
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 35777663456789999887 6554322 1101 1111222 34 4777763 677777763
No 144
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.19 E-value=7.3 Score=31.03 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=55.9
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcE---EeccCCc---c--CCcEEEE---cCeEEEEeCcEEEEecCCceEEEeccccc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGW---TVEDYGW---L--QGPMAIV---HDSVYLMSHGLIIKQHRDVRKVVASASEF 247 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W---~~~~~~~---~--~~~~~~~---~~~ly~~g~~~~~~yd~~~W~~v~~~~~~ 247 (317)
.+|++|++-| +..++||..+... ..+.... + ...+|.. ++++|++.|+..+.||..+-+....-|..
T Consensus 60 ~~g~~yfFkg--~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~~yw~yd~~~~~v~~gyPk~ 137 (196)
T 3c7x_A 60 KDGKFVFFKG--DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKN 137 (196)
T ss_dssp TTSCEEEEET--TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETTEEEEEETTTTEECTTCSEE
T ss_pred CCCcEEEecC--CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECCEEEEEeCCcccccCCCCcc
Confidence 4788999966 4578887542110 1122211 1 2344442 58999999999999997653222221211
Q ss_pred -------cccccEEEEEECC-eEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 248 -------RRRIGFAMIGMGD-DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 248 -------~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
......++...++ ++|++-| +..+.||..+.
T Consensus 138 i~~~~gip~~idaAf~~~~~~~~YfFkg--------------~~y~r~d~~~~ 176 (196)
T 3c7x_A 138 IKVWEGIPESPRGSFMGSDEVFTYFYKG--------------NKYWKFNNQKL 176 (196)
T ss_dssp GGGSBTCCSSCSEEEECTTSSEEEEEET--------------TEEEEEETTTT
T ss_pred HHHCCCcCCCcceeEEecCCCEEEEEEC--------------CEEEEEECCcc
Confidence 1122233333344 8999866 25678888776
No 145
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=89.17 E-value=7.6 Score=31.24 Aligned_cols=57 Identities=9% Similarity=0.002 Sum_probs=37.9
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-----ccCCc----cCC-cEEEEcCeEEEEeCcEEEEecCCce
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-----EDYGW----LQG-PMAIVHDSVYLMSHGLIIKQHRDVR 238 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-----~~~~~----~~~-~~~~~~~~ly~~g~~~~~~yd~~~W 238 (317)
+|++|++-| +..++||..+++-.. +...+ ... ++...++.+|++.|+..+.||..+=
T Consensus 127 ~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFkg~~y~rf~~~~~ 193 (207)
T 1pex_A 127 TGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSN 193 (207)
T ss_dssp TSEEEEEET--TEEEEEETTTTEECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEETTEEEEEETTTT
T ss_pred CCEEEEEeC--CEEEEEeCcCccccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEECCEEEEEeCCcc
Confidence 589999976 568999987653210 00011 122 3334588999999999999998763
No 146
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.08 E-value=9.8 Score=32.39 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=62.0
Q ss_pred CCEEEEEec-CceeEEEEeCCCCcEEeccCC----------cc-CCcEEEE-c-CeEEEEeC--cEEEEecCCc--eEEE
Q 021080 180 GGKVHVLHK-GLSTVQVLDHMGLGWTVEDYG----------WL-QGPMAIV-H-DSVYLMSH--GLIIKQHRDV--RKVV 241 (317)
Q Consensus 180 ~g~lyv~gG-~~~~v~~yd~~~~~W~~~~~~----------~~-~~~~~~~-~-~~ly~~g~--~~~~~yd~~~--W~~v 241 (317)
+|.||+..+ ....|..||+....-..+... .. +..++.- + +.||+.+. +.+..|++++ ....
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 689999986 578899999665543333210 00 2233333 3 79999985 7899999874 3222
Q ss_pred eccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 242 ASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 242 ~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
-..+. ......+++...+.+|...|...... .....+.+||+.++
T Consensus 234 ~~~~~-~~~~~~~~~~~pg~~~~~~g~~~v~~-----~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 234 IKHAS-FGRNVFAISYIPGFLFAVNGKPYFGD-----QEPVQGFVMNFSSG 278 (329)
T ss_dssp ECCTT-TTTCEEEEEEETTEEEEEECCCCTTC-----SCCCCEEEEETTTC
T ss_pred Eeccc-cCCCcceeeecCCEEEEeCCCEEecc-----CCCcEEEEEEcCCC
Confidence 11121 11222234444577787777533221 12347888998877
No 147
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.86 E-value=12 Score=33.04 Aligned_cols=112 Identities=14% Similarity=0.112 Sum_probs=60.5
Q ss_pred ceeEEeeCCCCceeeCC--CCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEeccC-Ccc-CCcEEEE--c
Q 021080 148 SQAEMYDPEKDVWVPIP--DLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVEDY-GWL-QGPMAIV--H 219 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~--~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~-~~~-~~~~~~~--~ 219 (317)
..+.++++.....+.+. .+..+ . ..++ .++.||+.-.....|+++++....-..+.. ... +..+++- +
T Consensus 138 ~~I~r~~~~g~~~~~~~~~~~~~p-~---glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~ 213 (386)
T 3v65_B 138 DRILRANLNGSNVEEVVSTGLESP-G---GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME 213 (386)
T ss_dssp TEEEEEETTSCCEEEEECSSCSCC-C---CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTT
T ss_pred CcEEEEecCCCCcEEEEeCCCCCc-c---EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCC
Confidence 34556666655444432 22223 1 1233 378999997766789999987654333221 111 2333433 6
Q ss_pred CeEEEEeC---cEEEEecCCc--eEEEeccccccccccEEEEE--ECCeEEEEe
Q 021080 220 DSVYLMSH---GLIIKQHRDV--RKVVASASEFRRRIGFAMIG--MGDDIYVIG 266 (317)
Q Consensus 220 ~~ly~~g~---~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~--~~~~lyv~G 266 (317)
+.||+.+. ..+++++.+. -+.+..-. .....+++. .+++||+.-
T Consensus 214 g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 214 GTIYWTDWGNTPRIEASSMDGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSCEEEECSS---CSCEEEEEEEGGGTEEEEEE
T ss_pred CeEEEeccCCCCEEEEEeCCCCCcEEEEECC---CCCeeeEEEeCCCCEEEEEE
Confidence 78999874 5788888765 22222111 112233444 367888874
No 148
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.84 E-value=11 Score=32.51 Aligned_cols=93 Identities=9% Similarity=0.042 Sum_probs=49.4
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEE-E-EECCE-EEEEec--Cc--eeEEEEeCCCCcEEeccCCccCCcEEEE-c
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTG-V-VIGGK-VHVLHK--GL--STVQVLDHMGLGWTVEDYGWLQGPMAIV-H 219 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~-~-~~~g~-lyv~gG--~~--~~v~~yd~~~~~W~~~~~~~~~~~~~~~-~ 219 (317)
..++++|..+.+++.+.. ..+ ...... + .-+|+ |++... .. ..+..+|+.+++...+...........- +
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~d 293 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAE-GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFD 293 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCT-TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSS
T ss_pred ceEEEEECCCCceeEeec-cCC-CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCC
Confidence 467778877777776654 211 111111 2 22554 444432 22 4499999988876655432221122223 6
Q ss_pred CeEEEEe------------------CcEEEEecCCc--eEEEe
Q 021080 220 DSVYLMS------------------HGLIIKQHRDV--RKVVA 242 (317)
Q Consensus 220 ~~ly~~g------------------~~~~~~yd~~~--W~~v~ 242 (317)
++++++. ...++.+|.+. .+.+.
T Consensus 294 g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 294 GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp SSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred CceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 6766652 25788888764 54444
No 149
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=88.83 E-value=8.9 Score=31.61 Aligned_cols=102 Identities=9% Similarity=0.028 Sum_probs=48.4
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCc-eEEEecccccccc
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRR 250 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~~~r 250 (317)
.+..++.+++.|+....+..||.................++.. ++..++.++ +.+..||..+ -..+.... ...
T Consensus 109 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~ 186 (313)
T 3odt_A 109 SLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIH--NDV 186 (313)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSC--SSC
T ss_pred EEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccC--ccc
Confidence 3444666667777667788888333333222211111111111 344444443 6788888655 33332212 111
Q ss_pred ccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 IGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.......-+++ ++.|+.+ ..+.+||+.+.
T Consensus 187 i~~~~~~~~~~-~~~~~~d------------g~i~i~d~~~~ 215 (313)
T 3odt_A 187 VRHLAVVDDGH-FISCSND------------GLIKLVDMHTG 215 (313)
T ss_dssp EEEEEEEETTE-EEEEETT------------SEEEEEETTTC
T ss_pred EEEEEEcCCCe-EEEccCC------------CeEEEEECCch
Confidence 21222233556 5555422 25778888765
No 150
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.79 E-value=9.6 Score=31.95 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=37.1
Q ss_pred ECCEEEEEecCceeEEEEeCCC-CcEEeccCCccCCcEEEE-cCeEEEEeC-cEEEEecCCc---eEEE
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMG-LGWTVEDYGWLQGPMAIV-HDSVYLMSH-GLIIKQHRDV---RKVV 241 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~-~~W~~~~~~~~~~~~~~~-~~~ly~~g~-~~~~~yd~~~---W~~v 241 (317)
-+|.||+.. ..+.+||... ..|............+.. ++.||+... +.++.|+++. |+.-
T Consensus 186 ~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~ 251 (330)
T 3hxj_A 186 KDGTIYFGS---DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFK 251 (330)
T ss_dssp TTCCEEEES---SSEEEECTTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEe---CEEEEECCCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEee
Confidence 367888764 6799999432 247655332222233333 568998874 7899998754 7654
No 151
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=88.66 E-value=9.8 Score=31.85 Aligned_cols=100 Identities=10% Similarity=-0.086 Sum_probs=50.2
Q ss_pred CCEEEEEecCceeEEEEeCCCCc--EEeccCCccCCcEEEE----cCeEEEEeC--cEEEEecCCceEEEeccccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWLQGPMAIV----HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRI 251 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~----~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~ 251 (317)
++.+++.|+....+..||..+.. ................ ++.+.+.++ +.+..+|.++.+.+..+..-....
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE
Confidence 45677777766778889986543 2111110000111111 334444443 688888887755544443101111
Q ss_pred cEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 GFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 ~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..++. -++.+++.|+.++ .|.+||.++.
T Consensus 232 -~~~~~~p~~~~l~s~s~Dg------------~i~iWd~~~~ 260 (304)
T 2ynn_A 232 -SFAVFHPTLPIIISGSEDG------------TLKIWNSSTY 260 (304)
T ss_dssp -EEEEECSSSSEEEEEETTS------------CEEEEETTTC
T ss_pred -EEEEECCCCCEEEEEcCCC------------eEEEEECCCC
Confidence 11222 2456666666432 5677888765
No 152
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.64 E-value=8.6 Score=32.47 Aligned_cols=105 Identities=10% Similarity=0.037 Sum_probs=58.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCcc--CCcEEE-EcCeEEEEeC------cEEEEecCCc--eE-EEeccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL--QGPMAI-VHDSVYLMSH------GLIIKQHRDV--RK-VVASASEF 247 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~--~~~~~~-~~~~ly~~g~------~~~~~yd~~~--W~-~v~~~~~~ 247 (317)
+|+||+.+.....+..||+.+++...+..... ...++. -++++|+... +.++.+|++. -+ .+.....
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~- 133 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST- 133 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS-
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc-
Confidence 67899887656789999999888765431111 112222 2678888864 3799999876 33 2221111
Q ss_pred cccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 248 RRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 248 ~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..+. ..++. -++++|+........ .....+++||++++
T Consensus 134 ~~~~-~~i~~d~~g~l~v~~~~~~~~------~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 134 AYCI-DDMVFDSKGGFYFTDFRGYST------NPLGGVYYVSPDFR 172 (333)
T ss_dssp CCCE-EEEEECTTSCEEEEECCCBTT------BCCEEEEEECTTSC
T ss_pred CCcc-cceEECCCCCEEEEecccccc------CCCceEEEEeCCCC
Confidence 1112 22222 257788764321111 12236777777665
No 153
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.60 E-value=13 Score=33.04 Aligned_cols=135 Identities=9% Similarity=0.000 Sum_probs=69.4
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE-ECCE-EEEEec--CceeEEEEeCCCCcEEeccCCccCCcEEEE--cCe
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-IGGK-VHVLHK--GLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDS 221 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~-~~g~-lyv~gG--~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ 221 (317)
..+.++|..+++...+...+.. ..+.+. -+|+ |++.+. ....++.+|+.+++...+............ +++
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~---~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRH---NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSC---EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSS
T ss_pred cEEEEEECCCCcEEEeecCCCc---ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCC
Confidence 5677888888776655433221 112222 2554 554543 345699999998877665433221111122 444
Q ss_pred -EEEEeC----cEEEEecCCc--eEEEeccccccccccEEEE-EECCeEEEEeCcccCCCCceecccCcceeEeecCCCC
Q 021080 222 -VYLMSH----GLIIKQHRDV--RKVVASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER 293 (317)
Q Consensus 222 -ly~~g~----~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 293 (317)
|++... ..++.+|.+. -+.+.... .....++ .-+|+.+++++.... ...++++|++++
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~----~~~~~~~~spdG~~l~~~~~~~g---------~~~i~~~d~~~~- 345 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNINGGAPQRITWEG----SQNQDADVSSDGKFMVMVSSNGG---------QQHIAKQDLATG- 345 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCCEECCCSS----SEEEEEEECTTSSEEEEEEECSS---------CEEEEEEETTTC-
T ss_pred EEEEEECCCCCcEEEEEECCCCCEEEEecCC----CcccCeEECCCCCEEEEEECcCC---------ceEEEEEECCCC-
Confidence 444443 2788888765 23322111 1111222 225555555443211 237889999887
Q ss_pred Cceeecc
Q 021080 294 PTWRQVS 300 (317)
Q Consensus 294 ~~W~~~~ 300 (317)
+...+.
T Consensus 346 -~~~~l~ 351 (415)
T 2hqs_A 346 -GVQVLS 351 (415)
T ss_dssp -CEEECC
T ss_pred -CEEEec
Confidence 665543
No 154
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=88.59 E-value=4.5 Score=33.11 Aligned_cols=56 Identities=13% Similarity=0.139 Sum_probs=36.1
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-----ccCCc---------cCCcEEEE---cCeEEEEeCcEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-----EDYGW---------LQGPMAIV---HDSVYLMSHGLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-----~~~~~---------~~~~~~~~---~~~ly~~g~~~~~~yd~~~ 237 (317)
++++|++-| +..++||..+++-.. +...+ ....+|.. ++++|++-|+..|.||..+
T Consensus 129 ~~k~yfFkG--~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~~Ywr~d~~~ 201 (227)
T 3lp9_A 129 GKEVYLFKG--DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDDHYARVKVTP 201 (227)
T ss_dssp TTEEEEEET--TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETTEEEEEECCS
T ss_pred CCEEEEEEC--CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECCEEEEEECCc
Confidence 689999977 568999987654211 11011 12334443 4789999999999888654
No 155
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=88.57 E-value=4.5 Score=32.93 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=58.8
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcE--EeccCCcc----CC-cEEEEcCeEEEEeCcEEEEecCCc-eEEEeccccc---
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGW--TVEDYGWL----QG-PMAIVHDSVYLMSHGLIIKQHRDV-RKVVASASEF--- 247 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W--~~~~~~~~----~~-~~~~~~~~ly~~g~~~~~~yd~~~-W~~v~~~~~~--- 247 (317)
.+|++|++-| ...++++...+.+ ..+...++ .. ++...++++|++-|+.+|.|+..+ .+.+...|..
T Consensus 27 ~~g~~yfFkg--~~~Wr~~~~~~~~~p~~Is~~wpgLP~~IDAA~~~~~~~yfFkG~~yw~~~~~~~~~~~~gyPk~i~~ 104 (219)
T 1hxn_A 27 NHGATYVFSG--SHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFSWEDKLYLIQDTKVYVFLTKGGYTLVNGYPKRLEK 104 (219)
T ss_dssp TTSCEEEEET--TEEEESSSSSCTTCCEEGGGTCTTSCSSCSEEEEETTEEEEEETTEEEEEECSSSCEECTTCCEEHHH
T ss_pred CCCcEEEEeC--CEEEEEcCCCCCCCceEhhhhccCCCCCccEEEEECCcEEEecCCEEEEEeCCCCceecCCCCeehhh
Confidence 5899999966 4566666543321 12222221 22 233458999999999999998653 3333322211
Q ss_pred -----c----ccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC-CCceeec
Q 021080 248 -----R----RRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE-RPTWRQV 299 (317)
Q Consensus 248 -----~----~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~-~~~W~~~ 299 (317)
. .+..+++.. .++++|++-| +..|.||..+. +..|+..
T Consensus 105 ~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--------------~~ywr~d~~~~P~~i~~~~ 153 (219)
T 1hxn_A 105 ELGSPPVISLEAVDAAFVCPGSSRLHIMAG--------------RRLWWLDLKSGAQATWTEL 153 (219)
T ss_dssp HHCCCSSCCCSCCCEEECCTTCCEEEEEET--------------TEEEEEEGGGGGGCCCEEE
T ss_pred ccCCCCcccccccceeEEecCCCEEEEEeC--------------CEEEEEeCCCCceEhhhcC
Confidence 1 113333322 2589999977 25678886654 2245544
No 156
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.38 E-value=12 Score=32.49 Aligned_cols=85 Identities=19% Similarity=0.207 Sum_probs=52.0
Q ss_pred CCEEEEEecCc-eeEEEEeCCCCcEEecc-CCcc-CCcEEE--EcCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHKGL-STVQVLDHMGLGWTVED-YGWL-QGPMAI--VHDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG~~-~~v~~yd~~~~~W~~~~-~~~~-~~~~~~--~~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
+|.||+..-.. ..|+++++....-+.+- .... +..++. .+++||+.+. +.|+.++.+. -+.+.... ..
T Consensus 170 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~---~~ 246 (349)
T 3v64_C 170 EGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---LP 246 (349)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS---CS
T ss_pred cCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC---CC
Confidence 68999986544 78999998765433332 1111 233444 2689999985 6888888765 23332211 11
Q ss_pred ccEEEEEECCeEEEEeC
Q 021080 251 IGFAMIGMGDDIYVIGG 267 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~GG 267 (317)
.-.+++..++.||+..-
T Consensus 247 ~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 247 HPFAITVFEDSLYWTDW 263 (349)
T ss_dssp SEEEEEEETTEEEEEET
T ss_pred CceEEEEECCEEEEecC
Confidence 23456668899998853
No 157
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.17 E-value=11 Score=32.02 Aligned_cols=86 Identities=12% Similarity=0.066 Sum_probs=51.4
Q ss_pred CCEEEEEecC-ceeEEEEeCCCCcEEecc--CCccCCcEEEE--cCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHKG-LSTVQVLDHMGLGWTVED--YGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG~-~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
++.||+..-. ...|+++++....-+.+. ....+..++.- +++||+.+. +.+..+|.+. -+.+..... ...
T Consensus 131 ~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~-~~~ 209 (316)
T 1ijq_A 131 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLA 209 (316)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT-TTS
T ss_pred CCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC-ccC
Confidence 6899998643 368999998654433331 11112334433 679999986 6888888764 333322211 112
Q ss_pred ccEEEEEECCeEEEEe
Q 021080 251 IGFAMIGMGDDIYVIG 266 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~G 266 (317)
...+++..++.||+.-
T Consensus 210 ~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 210 HPFSLAVFEDKVFWTD 225 (316)
T ss_dssp SEEEEEEETTEEEEEE
T ss_pred CcEEEEEECCEEEEEE
Confidence 3346666788999875
No 158
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.98 E-value=13 Score=32.64 Aligned_cols=89 Identities=9% Similarity=0.037 Sum_probs=51.2
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEE--EECCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEEcCeEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGV--VIGGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIVHDSVYL 224 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~--~~~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~ly~ 224 (317)
..+.++|..+++-..+-.+... ...-.++ .-+|++.+.|+....+..||..+++-... ............++.+.+
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~ 203 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILS 203 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEE
Confidence 5688888888876655443332 2222222 23678888888777899999988753222 111112222334566655
Q ss_pred EeC--cEEEEecCCc
Q 021080 225 MSH--GLIIKQHRDV 237 (317)
Q Consensus 225 ~g~--~~~~~yd~~~ 237 (317)
.++ +.++.+|...
T Consensus 204 sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 204 SGSRSGHIHHHDVRV 218 (420)
T ss_dssp EEETTSEEEEEETTS
T ss_pred EEeCCCceeEeeecc
Confidence 554 5677777655
No 159
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=87.82 E-value=13 Score=32.11 Aligned_cols=100 Identities=13% Similarity=0.018 Sum_probs=51.9
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-ccC---C---ccCCcEEEE--cCeEEEEeC-----cEEEEecCCceEEEeccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-EDY---G---WLQGPMAIV--HDSVYLMSH-----GLIIKQHRDVRKVVASAS 245 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~---~---~~~~~~~~~--~~~ly~~g~-----~~~~~yd~~~W~~v~~~~ 245 (317)
++ +++.|+....+..||..+.+-.. +.. . ......... ++.+++.++ +.+..||..+.+.+..+.
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec
Confidence 56 66677666789999998775322 111 1 111111222 455555543 478889887644433333
Q ss_pred ccc-----------ccccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 246 EFR-----------RRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 246 ~~~-----------~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+. .......+.+ ++++++.|+.+ ..|.+||+.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~ 323 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD------------GKLRFWDVKTK 323 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSSEEEEEETT------------SEEEEEETTTT
T ss_pred cCcccccccccccccCCcEEEEEECCCCCEEEEEeCC------------CeEEEEEcCCC
Confidence 100 1111122222 46666666632 26788898766
No 160
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=87.27 E-value=11 Score=30.64 Aligned_cols=96 Identities=10% Similarity=0.102 Sum_probs=54.1
Q ss_pred CCEEEEEecCceeEEEEeCCCCc--E-EeccC-Ccc----CCcEEEE---cCeEEEEeCcEEEEecCCceEEEecccc--
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG--W-TVEDY-GWL----QGPMAIV---HDSVYLMSHGLIIKQHRDVRKVVASASE-- 246 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~--W-~~~~~-~~~----~~~~~~~---~~~ly~~g~~~~~~yd~~~W~~v~~~~~-- 246 (317)
++++|++-| +..++||..+.. + ..+.. ..+ ...+|.. ++++|++.|+..+.||..+-+....-|.
T Consensus 87 ~~k~yfFkG--~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~~ywr~d~~~~~v~~gyPr~i 164 (218)
T 1gen_A 87 EEKAVFFAG--NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLI 164 (218)
T ss_dssp TTEEEEEET--TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETTEEEEEETTTTEECSSCCEEH
T ss_pred CCEEEEEeC--CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECCEEEEEECccccccCCCCcch
Confidence 689999966 568888853110 0 01111 111 2344443 5899999999999999765222221111
Q ss_pred ------ccccccEEEEEEC--CeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 247 ------FRRRIGFAMIGMG--DDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 247 ------~~~r~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...... ++.... |++|++-| +..+.||..+.
T Consensus 165 ~~~w~g~p~~id-aAf~~~~~g~~YfFkg--------------~~y~~~~~~~~ 203 (218)
T 1gen_A 165 ADAWNAIPDNLD-AVVDLQGGGHSYFFKG--------------AYYLKLENQSL 203 (218)
T ss_dssp HHHSSSCCSSCS-EEEECTTTCEEEEEET--------------TEEEEEETTEE
T ss_pred hhccCCCCCCCC-EEEEEcCCCcEEEEEC--------------CEEEEEECCce
Confidence 011222 334443 89999866 25667777654
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.25 E-value=9.9 Score=32.28 Aligned_cols=89 Identities=11% Similarity=-0.056 Sum_probs=49.8
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEec--CceeEEEEeCCCCcEEeccCCcc----CCcEEEE-cC
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK--GLSTVQVLDHMGLGWTVEDYGWL----QGPMAIV-HD 220 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG--~~~~v~~yd~~~~~W~~~~~~~~----~~~~~~~-~~ 220 (317)
-.++.+|.++++++.+........-...+..-+|+||+.+. ....+..||+.++.++.+..... +..++.. ++
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg 97 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR 97 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC
Confidence 34666777788776643221110111122333788888764 25689999998887766543211 2233333 34
Q ss_pred -eEEEEeC--cEEEEecCC
Q 021080 221 -SVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 221 -~ly~~g~--~~~~~yd~~ 236 (317)
.+|+.+. +.+..|+..
T Consensus 98 ~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 98 QLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp TEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEeC
Confidence 4777762 667777654
No 162
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=87.17 E-value=7.2 Score=31.88 Aligned_cols=117 Identities=9% Similarity=0.067 Sum_probs=64.0
Q ss_pred CCceeeCCCCC---ccCCCceEEE-EECCEEEEEecCceeEEEEe--CCC-------------CcEEeccCC--ccCCcE
Q 021080 157 KDVWVPIPDLH---RTHNSACTGV-VIGGKVHVLHKGLSTVQVLD--HMG-------------LGWTVEDYG--WLQGPM 215 (317)
Q Consensus 157 t~~W~~~~~~p---~~~r~~~~~~-~~~g~lyv~gG~~~~v~~yd--~~~-------------~~W~~~~~~--~~~~~~ 215 (317)
+..|..++... .. .. ++. ..+|++|++-| +..++|+ +.+ +.|..++.. +....+
T Consensus 48 ~~~W~~Lp~~~f~p~~-iD--aaf~~~~g~~~fFKg--~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDA 122 (227)
T 3lp9_A 48 RDGFKSLNQTIFGSYG-ID--CSFDTENNEAFIFYE--NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDA 122 (227)
T ss_dssp HHHSGGGTTSHHHHHC-CS--EEEECSTTEEEEEET--TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSE
T ss_pred hhcCCcCCcccCCCCC-ce--EEEECCCCEEEEEeC--CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccE
Confidence 45687775432 22 21 122 36899999976 4677777 321 123333211 112344
Q ss_pred EEE---cCeEEEEeCcEEEEecCCceE-------EEe-cccccc-----ccccEEEEE-ECCeEEEEeCcccCCCCceec
Q 021080 216 AIV---HDSVYLMSHGLIIKQHRDVRK-------VVA-SASEFR-----RRIGFAMIG-MGDDIYVIGGVIGPDRWNWDI 278 (317)
Q Consensus 216 ~~~---~~~ly~~g~~~~~~yd~~~W~-------~v~-~~~~~~-----~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 278 (317)
|.. ++++|++.|+..+.|+...=+ .+. .+|... ....+++.. .++++|++-|
T Consensus 123 A~~~~~~~k~yfFkG~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg----------- 191 (227)
T 3lp9_A 123 AYRSTRGKEVYLFKGDQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD----------- 191 (227)
T ss_dssp EEECSSTTEEEEEETTEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-----------
T ss_pred EEEECCCCEEEEEECCEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-----------
Confidence 433 589999999999999965311 111 223111 233343332 3689999977
Q ss_pred ccCcceeEeecCCC
Q 021080 279 KPMSDVDVLTVGAE 292 (317)
Q Consensus 279 ~~~~~v~~yd~~~~ 292 (317)
+..|.||..+.
T Consensus 192 ---~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 ---DHYARVKVTPX 202 (227)
T ss_dssp ---TEEEEEECCSS
T ss_pred ---CEEEEEECCcc
Confidence 25567777653
No 163
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=87.15 E-value=15 Score=32.32 Aligned_cols=97 Identities=7% Similarity=0.057 Sum_probs=57.1
Q ss_pred CCEEEEEecCceeEEEEeCCCCc--E-EeccCC-cc----CCcEEEE---cCeEEEEeCcEEEEecCCceEEEeccc---
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG--W-TVEDYG-WL----QGPMAIV---HDSVYLMSHGLIIKQHRDVRKVVASAS--- 245 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~--W-~~~~~~-~~----~~~~~~~---~~~ly~~g~~~~~~yd~~~W~~v~~~~--- 245 (317)
+|++|++-| +..++|+..+.. + ..+... .+ ...+|.. ++++|++-|+..|.||..+-+....-|
T Consensus 236 ~g~~~fFkg--~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~~yw~yd~~~~~v~~gyPk~I 313 (365)
T 3ba0_A 236 RNQVFLFKD--DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLI 313 (365)
T ss_dssp GTEEEEEET--TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETTEEEEEETTTTEECSSCCCCH
T ss_pred CCEEEEEeC--CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECCEEEEEeCCcceecCCCCcch
Confidence 799999966 457777654221 1 122221 11 2334432 479999999999999976533222222
Q ss_pred -----cccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 246 -----EFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 246 -----~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
........++..-++++|++-| +..|.||..+.
T Consensus 314 ~~~f~g~p~~iDaA~~~~~g~~YfFkg--------------~~ywr~d~~~~ 351 (365)
T 3ba0_A 314 TKNFQGIGPKIDAVFYSKNKYYYFFQG--------------SNQFEYDFLLQ 351 (365)
T ss_dssp HHHSTTCCSSCSEEEEETTTEEEEEET--------------TEEEEEETTTT
T ss_pred hhcCCCCCCccceeeEecCCcEEEEeC--------------CEEEEEECCcc
Confidence 1112233333333889999866 26788998876
No 164
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.04 E-value=13 Score=31.57 Aligned_cols=99 Identities=15% Similarity=0.136 Sum_probs=57.9
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcEEecc--CCccCCcEEE--EcCeEEEEeC---cEEEEecCCc-e-EEEeccccccc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGWTVED--YGWLQGPMAI--VHDSVYLMSH---GLIIKQHRDV-R-KVVASASEFRR 249 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~--~~~~ly~~g~---~~~~~yd~~~-W-~~v~~~~~~~~ 249 (317)
.+++||+.-.....|+++|+....-..+- .+..+..+++ .++.||+.+. ..++.++.+. - +.+.... .
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~---~ 163 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN---I 163 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS---C
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC---C
Confidence 37899998765678999998765433221 1111233344 2678999874 5788888765 2 2232111 1
Q ss_pred cccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 250 RIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 250 r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
....+++.- +++||+.-.. .+.|+++|++..
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~------------~~~I~~~d~dg~ 196 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSK------------LHSISSIDVNGG 196 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSC
T ss_pred CCceEEEEeccCCEEEEEECC------------CCeEEEEecCCC
Confidence 222344443 6789987531 236777777654
No 165
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.99 E-value=13 Score=31.55 Aligned_cols=89 Identities=4% Similarity=-0.148 Sum_probs=45.4
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEE--eccC-CccCCcEEEE--cCeEE
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWT--VEDY-GWLQGPMAIV--HDSVY 223 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~--~~~~-~~~~~~~~~~--~~~ly 223 (317)
.+.+||.++.+-.............+.+..-++.+++.|+....+..||..+..-. .+.. .......... ++...
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 45567766665433221111101122222336788888887778999999887632 2322 1111111122 34433
Q ss_pred EE-eCcEEEEecCCc
Q 021080 224 LM-SHGLIIKQHRDV 237 (317)
Q Consensus 224 ~~-g~~~~~~yd~~~ 237 (317)
+. +.+.+..+|..+
T Consensus 230 ~s~~~~~v~iwd~~~ 244 (343)
T 3lrv_A 230 VVECDQTVVCFDLRK 244 (343)
T ss_dssp EEEESSBEEEEETTS
T ss_pred EEEeCCeEEEEEcCC
Confidence 33 346788888765
No 166
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=86.48 E-value=14 Score=33.62 Aligned_cols=58 Identities=9% Similarity=0.023 Sum_probs=38.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-----eccCCc----cCCcE-EEEcCeEEEEeCcEEEEecCCceE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-----VEDYGW----LQGPM-AIVHDSVYLMSHGLIIKQHRDVRK 239 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-----~~~~~~----~~~~~-~~~~~~ly~~g~~~~~~yd~~~W~ 239 (317)
++++|++-| +..++||..+++-. .+...+ ....+ ...++++|++.|+..|.||..+-+
T Consensus 367 ~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFkg~~ywr~d~~~~~ 434 (450)
T 1su3_A 367 TGKTYFFVA--NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFHGTRQYKFDPKTKR 434 (450)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEETTEEEEEETTTTE
T ss_pred CCeEEEEeC--CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEeCCEEEEEECCcce
Confidence 689999976 57999998754322 111111 12233 335789999999999999987633
No 167
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.29 E-value=13 Score=30.62 Aligned_cols=110 Identities=9% Similarity=0.037 Sum_probs=56.1
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEE--cCeEEEEeC-cEEEEecCCceEEEeccccccccc
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIV--HDSVYLMSH-GLIIKQHRDVRKVVASASEFRRRI 251 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~--~~~ly~~g~-~~~~~yd~~~W~~v~~~~~~~~r~ 251 (317)
+..-+++ ++.|+....+..||..+.+-. .+............ ++.++..+. +.+..||.++.+.+..+.......
T Consensus 191 ~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i 269 (313)
T 3odt_A 191 AVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISI 269 (313)
T ss_dssp EEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCE
T ss_pred EEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceE
Confidence 3445777 666666778999999876522 22111111111122 445444443 789999987744443333111111
Q ss_pred cEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccC
Q 021080 252 GFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPM 302 (317)
Q Consensus 252 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~ 302 (317)
..+... +++ ++.|+.+ ..|.+||++++ ++.....+
T Consensus 270 -~~~~~~~~~~-~~~~~~d------------g~i~iw~~~~~--~~~~~~~~ 305 (313)
T 3odt_A 270 -WSVDCMSNGD-IIVGSSD------------NLVRIFSQEKS--RWASEDEI 305 (313)
T ss_dssp -EEEEECTTSC-EEEEETT------------SCEEEEESCGG--GCCC----
T ss_pred -EEEEEccCCC-EEEEeCC------------CcEEEEeCCCC--ceeehhhh
Confidence 222222 556 4455432 26889999988 76554433
No 168
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=86.23 E-value=0.33 Score=43.00 Aligned_cols=106 Identities=10% Similarity=0.058 Sum_probs=45.8
Q ss_pred EEEECCEEEEEecCceeEEEEeCCCCc--EEeccCCccCCcEEEEcCeEEEEe--CcEEEEecCCc----eEEEeccccc
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWLQGPMAIVHDSVYLMS--HGLIIKQHRDV----RKVVASASEF 247 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~ly~~g--~~~~~~yd~~~----W~~v~~~~~~ 247 (317)
.++.++.+|+.+. ...+.++|..+++ |+... .......+..++++|+.+ .+.++.+|.++ |+.-...+..
T Consensus 5 P~v~~~~v~~gs~-dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 5 VTLPETLLFVSTL-DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp ---CTTEEEEEET-TSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred CeeeCCEEEEEcC-CCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 3456777777654 4579999988775 87654 222223344567788875 47899999743 7643222211
Q ss_pred cccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceee
Q 021080 248 RRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQ 298 (317)
Q Consensus 248 ~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~ 298 (317)
... ..++..++.||+ |+. -..++.+|+++++..|+.
T Consensus 83 -~~~-sp~~~~~~~v~~-g~~------------dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 83 -VQA-SPCRSSDGILYM-GKK------------QDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp -HTT-CSCC-----CCC-CEE------------EEEEEEECCC--------
T ss_pred -ccc-CceEecCCEEEE-EeC------------CCEEEEEECCCCcEEEEe
Confidence 011 111113455543 221 125788888888667864
No 169
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=86.17 E-value=10 Score=35.54 Aligned_cols=48 Identities=25% Similarity=0.074 Sum_probs=27.4
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEc
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLG 108 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~G 108 (317)
++.+||... ....+..+|..+++-..--+... .-+.++.. +..+|+.+
T Consensus 166 ~~~~~V~~~-~~~~V~viD~~t~~v~~~i~~g~-----~p~~v~~SpDGr~lyv~~ 215 (567)
T 1qks_A 166 ENLFSVTLR-DAGQIALIDGSTYEIKTVLDTGY-----AVHISRLSASGRYLFVIG 215 (567)
T ss_dssp GGEEEEEET-TTTEEEEEETTTCCEEEEEECSS-----CEEEEEECTTSCEEEEEE
T ss_pred CceEEEEeC-CCCeEEEEECCCCeEEEEEeCCC-----CccceEECCCCCEEEEEc
Confidence 456777654 35789999999886543212221 11333332 45688764
No 170
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=86.12 E-value=16 Score=31.70 Aligned_cols=97 Identities=8% Similarity=-0.034 Sum_probs=51.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-ccC-CccCCcEEEE--cCe-EEEEeC--cEEEEecCCc----eEEEecccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-EDY-GWLQGPMAIV--HDS-VYLMSH--GLIIKQHRDV----RKVVASASEFR 248 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~-~~~~~~~~~~--~~~-ly~~g~--~~~~~yd~~~----W~~v~~~~~~~ 248 (317)
++++.+.|+....+..||+.+..-.. +.. .......... ++. +++.++ +.++.||... -..+....
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~--- 334 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE--- 334 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST---
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC---
Confidence 67777777766779999998775322 111 1111111222 343 444443 6888888765 22222211
Q ss_pred ccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCC
Q 021080 249 RRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGA 291 (317)
Q Consensus 249 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~ 291 (317)
...-..+...++++++.|+.+ ..+.+||+.+
T Consensus 335 ~~~v~~~~~~~~~~l~s~~~d------------~~v~iw~~~~ 365 (420)
T 3vl1_A 335 GTPINNVYFAAGALFVSSGFD------------TSIKLDIISD 365 (420)
T ss_dssp TSCEEEEEEETTEEEEEETTT------------EEEEEEEECC
T ss_pred CCCceEEEeCCCCEEEEecCC------------ccEEEEeccC
Confidence 112223344477888877743 2466777665
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=86.03 E-value=15 Score=31.19 Aligned_cols=99 Identities=7% Similarity=0.011 Sum_probs=52.3
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEeccCCcc----CCcEEEEcCeEEEEeC---------cEEEEecCCc---eEEEecc
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL----QGPMAIVHDSVYLMSH---------GLIIKQHRDV---RKVVASA 244 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~----~~~~~~~~~~ly~~g~---------~~~~~yd~~~---W~~v~~~ 244 (317)
+.|||.......|.+||+.+++....-.... ...++...+.+|...+ ..++.++... -..+...
T Consensus 208 g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~ 287 (329)
T 3fvz_A 208 DQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV 287 (329)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC
Confidence 8999998767889999998666543211110 1111122244444443 3677777554 2222211
Q ss_pred ccccccccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 245 SEFRRRIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 245 ~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+. ....-.+++.. +|.||+.... .+.|.+|+++..
T Consensus 288 ~~-~~~~p~~ia~~~dG~lyvad~~------------~~~I~~~~~~~~ 323 (329)
T 3fvz_A 288 RK-HFDMPHDIVASEDGTVYIGDAH------------TNTVWKFTLTEK 323 (329)
T ss_dssp SS-CCSSEEEEEECTTSEEEEEESS------------SCCEEEEEEEEC
T ss_pred CC-ccCCeeEEEECCCCCEEEEECC------------CCEEEEEeCCcc
Confidence 11 11122334433 5689987642 236788887653
No 172
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=85.91 E-value=15 Score=30.95 Aligned_cols=87 Identities=7% Similarity=-0.032 Sum_probs=47.7
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEE-EECCEEEEEecCceeEEEEeCCCCc---EEecc---------CCccCCcE
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGV-VIGGKVHVLHKGLSTVQVLDHMGLG---WTVED---------YGWLQGPM 215 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~-~~~g~lyv~gG~~~~v~~yd~~~~~---W~~~~---------~~~~~~~~ 215 (317)
.+.+||+.+.+.+.+...+.. +.....+ ..++.+|+.......++++|+.+.+ |...+ ....+..+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred eEEEEcCCCCeEEEEEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc
Confidence 355667666666555444433 3332222 3356788875435689999987642 21111 11112223
Q ss_pred EEEcCeEEEEeC--cEEEEecCC
Q 021080 216 AIVHDSVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 216 ~~~~~~ly~~g~--~~~~~yd~~ 236 (317)
..-++.||+... +.+++|+.+
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBC
T ss_pred CcCCCEEEEEeCCCCEEEEEEeC
Confidence 223457999874 789988864
No 173
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.87 E-value=14 Score=35.57 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=55.9
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcEEeccC-C-ccCCcEEE--EcCeEEEEeC---cEEEEecCCc--eEEEeccccccc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGWTVEDY-G-WLQGPMAI--VHDSVYLMSH---GLIIKQHRDV--RKVVASASEFRR 249 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~-~-~~~~~~~~--~~~~ly~~g~---~~~~~yd~~~--W~~v~~~~~~~~ 249 (317)
.+++||+.-.....|+++|+....-..+-. . ..+..+++ .++.||+.+. ..|++++.+. -+.+.... .
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~---l 539 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN---I 539 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS---C
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC---C
Confidence 468899986555679999987765443322 1 12334444 2678998873 5788877654 33332111 1
Q ss_pred cccEEEEE--ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 250 RIGFAMIG--MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 250 r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
....+++. .+++||+.-.. .+.|+++|+...
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~------------~~~I~~~d~dG~ 572 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSK------------LHSISSIDVNGG 572 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETT------------TTEEEEECSSSS
T ss_pred CCccEEEEeccCCEEEEEecC------------CCeEEEEccCCC
Confidence 11123333 36788887531 236777777653
No 174
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=85.80 E-value=21 Score=32.72 Aligned_cols=129 Identities=5% Similarity=-0.061 Sum_probs=66.2
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccC--CccCCcEEEE-----
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDY--GWLQGPMAIV----- 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~--~~~~~~~~~~----- 218 (317)
..+.+||..+++... ..+... ......+.+ ++++.+.|+....+..||..+.+-...-. .......+..
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~-~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPL-RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 544 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-
T ss_pred CeEEEEECCCccccc-cccCCc-cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccc
Confidence 346667777665532 222211 222233333 77888888766789999998775432211 1111122222
Q ss_pred -------cCeEEEEeC--cEEEEecCCce-EEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEee
Q 021080 219 -------HDSVYLMSH--GLIIKQHRDVR-KVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLT 288 (317)
Q Consensus 219 -------~~~ly~~g~--~~~~~yd~~~W-~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd 288 (317)
++++.+.++ +.++.||.+.. +.+..+..-..........-+++ ++.+|.+ ..|.+||
T Consensus 545 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d------------~~v~iw~ 611 (615)
T 1pgu_A 545 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGAD------------ACIKRWN 611 (615)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETT------------SCEEEEE
T ss_pred cccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCC------------ceEEEEe
Confidence 566666654 67888887763 44433331111121222334677 6666633 2567777
Q ss_pred cCC
Q 021080 289 VGA 291 (317)
Q Consensus 289 ~~~ 291 (317)
+++
T Consensus 612 ~~~ 614 (615)
T 1pgu_A 612 VVL 614 (615)
T ss_dssp EC-
T ss_pred eec
Confidence 764
No 175
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=85.78 E-value=18 Score=31.99 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=58.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccC-Ccc-CCcEEE--EcCeEEEEeC---cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDY-GWL-QGPMAI--VHDSVYLMSH---GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~-~~~-~~~~~~--~~~~ly~~g~---~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
++.||+.-.....|+++|+....-..+-. ... +..+++ .++.||..+. ..++.++.+. =+.+..- ...
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~---~l~ 246 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQ 246 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS---SCS
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC---CCC
Confidence 78999997766789999998765444322 111 223343 2688999873 5688887664 2222110 011
Q ss_pred ccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 IGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 ~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.-.+++.- +++||+.-. ..+.|+++|++..
T Consensus 247 ~P~glavd~~~~~lY~aD~------------~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDS------------KLHSISSIDVNGG 278 (400)
T ss_dssp CEEEEEEETTTTEEEEEET------------TTTEEEEEETTSC
T ss_pred ceEEEEEEeCCCEEEEEEC------------CCCEEEEEeCCCC
Confidence 22344443 688999843 1246778887654
No 176
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=85.68 E-value=28 Score=35.56 Aligned_cols=131 Identities=7% Similarity=-0.023 Sum_probs=65.1
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCccCC-cEEEE-cCeEEEEe
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQG-PMAIV-HDSVYLMS 226 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~-~~~~~-~~~ly~~g 226 (317)
.+.+||..+.+-.....-+.. ...+.+..-+|+..+.|+....+..||..++............ .++.. ++.++..+
T Consensus 984 ~i~i~d~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 1062 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGHKK-AVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWS 1062 (1249)
T ss_dssp CCEEEETTTTSCEEECCCCSS-CCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEE
T ss_pred CEEEEEcCCCceeeecccCCC-ceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 456677666553322221212 2222233346777777776678999999988766443222111 11222 34444444
Q ss_pred C-cEEEEecCCceEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 227 H-GLIIKQHRDVRKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 227 ~-~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
. +.+..||..+-+.+..+.............-+++.++.|+.++ .+.+||..+.
T Consensus 1063 ~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~------------~v~iwd~~~~ 1117 (1249)
T 3sfz_A 1063 FDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK------------TAKIWSFDLL 1117 (1249)
T ss_dssp SSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS------------CCCEECSSSS
T ss_pred CCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC------------cEEEEECCCc
Confidence 3 6788888765222221111011121222233566666666432 4567777655
No 177
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=85.64 E-value=13 Score=30.30 Aligned_cols=66 Identities=9% Similarity=0.062 Sum_probs=44.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEEcCeEEEEeC--cEEEEecCCceEEEeccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIVHDSVYLMSH--GLIIKQHRDVRKVVASAS 245 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~ly~~g~--~~~~~yd~~~W~~v~~~~ 245 (317)
+++||+.-.....|.++|+....-..+ +....+..++.-++.+|+... +.+..+|+++.+.+..++
T Consensus 178 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 178 SSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 578999977667899999976432222 211123345556889999974 789999998766555554
No 178
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=84.94 E-value=9.6 Score=32.64 Aligned_cols=22 Identities=14% Similarity=-0.006 Sum_probs=16.1
Q ss_pred CCEEEEEecCceeEEEEeCCCC
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~ 201 (317)
++++.+.|+....+..||..+.
T Consensus 116 ~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 116 SGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEEECCCeEEEEECCCC
Confidence 5677777776667888888654
No 179
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=84.88 E-value=16 Score=30.62 Aligned_cols=59 Identities=7% Similarity=-0.124 Sum_probs=33.2
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE-----cCeEEEEeC--cEEEEecCCc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV-----HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~-----~~~ly~~g~--~~~~~yd~~~ 237 (317)
-++.+++.|+....+..||..+..-............... ++..++.++ +.+..||...
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 4677777777667899999988764322211111112222 345554443 6777787654
No 180
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=84.88 E-value=20 Score=31.55 Aligned_cols=58 Identities=7% Similarity=-0.193 Sum_probs=30.8
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~ 237 (317)
++...+.|+....+..||..++.-. .+.........+.. ++.+++.++ +.+..+|..+
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 5666677776778999999877532 11111000111111 345555543 5677777654
No 181
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=84.88 E-value=18 Score=31.07 Aligned_cols=103 Identities=5% Similarity=-0.071 Sum_probs=49.9
Q ss_pred CCEE-EEEecCceeEEEEeCCC------Cc---EE---ecc-------CCccCCcEEEE--cCeEEEEeC--cEEEEecC
Q 021080 180 GGKV-HVLHKGLSTVQVLDHMG------LG---WT---VED-------YGWLQGPMAIV--HDSVYLMSH--GLIIKQHR 235 (317)
Q Consensus 180 ~g~l-yv~gG~~~~v~~yd~~~------~~---W~---~~~-------~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~ 235 (317)
++.. ++.|+....+..||..+ .. |. .+. ........... ++ +++.+. +.+..||.
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISEL 214 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEET
T ss_pred CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEEC
Confidence 5666 77776566788888776 22 21 111 00111222222 34 555554 78899998
Q ss_pred CceEEEecccccc-c---cccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 236 DVRKVVASASEFR-R---RIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 236 ~~W~~v~~~~~~~-~---r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+-+.+..+.... . ......+.+ ++++++.|+.+.. ...|.+||+.+.
T Consensus 215 ~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~---------~g~i~i~d~~~~ 268 (397)
T 1sq9_A 215 STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS---------FGCITLYETEFG 268 (397)
T ss_dssp TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT---------EEEEEEEETTTC
T ss_pred CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC---------CceEEEEECCCC
Confidence 7633333222100 0 111122222 5677777764411 136788898766
No 182
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=84.85 E-value=16 Score=30.48 Aligned_cols=58 Identities=5% Similarity=-0.235 Sum_probs=29.9
Q ss_pred CCEEEEEecCceeEEEEeCCCCc-E-EeccCCccCCcEEEE---cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG-W-TVEDYGWLQGPMAIV---HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~-W-~~~~~~~~~~~~~~~---~~~ly~~g~--~~~~~yd~~~ 237 (317)
++++.+.|+....+..||..++. - ..+.........+.. ++.+++.++ +.+..+|..+
T Consensus 108 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 55666677766778888876652 1 111111011112222 334555543 6788888754
No 183
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=84.83 E-value=14 Score=29.83 Aligned_cols=59 Identities=12% Similarity=-0.012 Sum_probs=31.3
Q ss_pred eeEEeeCCC-CceeeCCCCCccCCCceEEEEECCEEEEEec----CceeEEEEeCCCCcEEecc
Q 021080 149 QAEMYDPEK-DVWVPIPDLHRTHNSACTGVVIGGKVHVLHK----GLSTVQVLDHMGLGWTVED 207 (317)
Q Consensus 149 ~~~~yd~~t-~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG----~~~~v~~yd~~~~~W~~~~ 207 (317)
.+.++|..+ .+...+...+...........-+++.+++++ ....++.+|..+..-..+.
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 126 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT 126 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee
Confidence 566777777 6666554333210111122233555444444 2567888888777655554
No 184
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=84.77 E-value=16 Score=30.31 Aligned_cols=98 Identities=9% Similarity=-0.118 Sum_probs=51.7
Q ss_pred CC-EEEEEecCceeEEEEeCC-CCcE------EeccCCc-c-CCcEEE-EcCeEEEEe--CcEEEEecCCc--eEEEecc
Q 021080 180 GG-KVHVLHKGLSTVQVLDHM-GLGW------TVEDYGW-L-QGPMAI-VHDSVYLMS--HGLIIKQHRDV--RKVVASA 244 (317)
Q Consensus 180 ~g-~lyv~gG~~~~v~~yd~~-~~~W------~~~~~~~-~-~~~~~~-~~~~ly~~g--~~~~~~yd~~~--W~~v~~~ 244 (317)
+| .+|+.......+.+||+. +++. ..++... . +..++. -+|.+|+.. .+.+..||+++ -...-..
T Consensus 186 dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 186 RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 34 577775545678899875 3432 2222111 1 112222 257899885 47899999873 2221122
Q ss_pred ccccccccEEEEE-ECCe-EEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 245 SEFRRRIGFAMIG-MGDD-IYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 245 ~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+ . ..-.+++. -+++ ||+.... .+.+++|+++..
T Consensus 266 ~--~-~~~~~i~~~~dg~~l~v~~~~------------~~~l~~~~~~~~ 300 (314)
T 1pjx_A 266 P--F-EKPSNLHFKPQTKTIFVTEHE------------NNAVWKFEWQRN 300 (314)
T ss_dssp S--S-SCEEEEEECTTSSEEEEEETT------------TTEEEEEECSSC
T ss_pred C--C-CCceeEEECCCCCEEEEEeCC------------CCeEEEEeCCCC
Confidence 2 1 12222332 2444 7776542 136888998765
No 185
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=84.42 E-value=22 Score=31.62 Aligned_cols=60 Identities=7% Similarity=-0.173 Sum_probs=34.3
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEec-c-CCccCCcEEEE-cCeEEEEeC--cEEEEecCCceEE
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVE-D-YGWLQGPMAIV-HDSVYLMSH--GLIIKQHRDVRKV 240 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~-~-~~~~~~~~~~~-~~~ly~~g~--~~~~~yd~~~W~~ 240 (317)
+++++.|+....+..||..+..-... . ........+.. ++++++.++ +.+..||..+.+.
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCE
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcE
Confidence 77888887667789999877653321 1 11111111122 565555554 6888888776433
No 186
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.38 E-value=17 Score=30.34 Aligned_cols=132 Identities=8% Similarity=-0.124 Sum_probs=60.7
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCccCC-cEEEE-cCeEEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQG-PMAIV-HDSVYLM 225 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~-~~~~~-~~~ly~~ 225 (317)
..+.+||..+.+-...-.-... ...+.+..-++++++.|+....+..||..+..-...-...... .++.. ++.+...
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCA 273 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred CEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeec
Confidence 3566777777654322111111 1111112236777777776677888998776522111110111 11111 2333332
Q ss_pred e-CcEEEEecCCceEEEeccccc------ccc--ccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 226 S-HGLIIKQHRDVRKVVASASEF------RRR--IGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 226 g-~~~~~~yd~~~W~~v~~~~~~------~~r--~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+ ++.+..||.+.-..+..+... ... .-.+++. -+++.++.||.+ ..|.+||++++
T Consensus 274 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D------------g~v~iW~~~tG 338 (340)
T 4aow_A 274 ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD------------NLVRVWQVTIG 338 (340)
T ss_dssp EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT------------SCEEEEEEEC-
T ss_pred cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC------------CEEEEEeCCCc
Confidence 2 367778877652222211100 001 1111222 256777777643 25788999876
No 187
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=84.38 E-value=19 Score=30.99 Aligned_cols=100 Identities=11% Similarity=-0.044 Sum_probs=48.0
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcEE-eccCCccCC-cEEEE-cCeEEEEeC--cEEEEecCCceEEEeccccccccccE
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQG-PMAIV-HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 253 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~-~~~~~-~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~ 253 (317)
-++. +++|+....+..||..+..-. .+....... .++.. ++++++.++ +.+..||....+.+..+.. ....-.
T Consensus 216 ~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~ 293 (425)
T 1r5m_A 216 DDDK-FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG-HSQSIV 293 (425)
T ss_dssp ETTE-EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC-CSSCEE
T ss_pred CCCE-EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC-CCccEE
Confidence 3444 566665678999999876421 111111111 11222 444444443 6788888766322222221 111112
Q ss_pred EEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 254 AMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 254 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+....+.+++.++.+ ..+.+||+.+.
T Consensus 294 ~~~~~~~~~l~~~~~d------------~~i~i~d~~~~ 320 (425)
T 1r5m_A 294 SASWVGDDKVISCSMD------------GSVRLWSLKQN 320 (425)
T ss_dssp EEEEETTTEEEEEETT------------SEEEEEETTTT
T ss_pred EEEECCCCEEEEEeCC------------CcEEEEECCCC
Confidence 3333323255555532 26778888766
No 188
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=84.34 E-value=18 Score=30.77 Aligned_cols=50 Identities=14% Similarity=0.103 Sum_probs=26.3
Q ss_pred EEeeCCCCceeeCCCCCccCCCceEEEEECCE-EEEEecCceeEEEEeCCCC
Q 021080 151 EMYDPEKDVWVPIPDLHRTHNSACTGVVIGGK-VHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 151 ~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~-lyv~gG~~~~v~~yd~~~~ 201 (317)
+.+|..+++.+.+...+......+..+. +++ ||+.......+..||..++
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 80 FAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp EEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTT
T ss_pred EEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCC
Confidence 3445555666665444322022222333 554 6666545567888888643
No 189
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=83.96 E-value=17 Score=30.27 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=26.0
Q ss_pred ceeEEEEeCCCCcEEec-cCCccCCcEEEE-cCe-EEEEeCcEEEEecCCc
Q 021080 190 LSTVQVLDHMGLGWTVE-DYGWLQGPMAIV-HDS-VYLMSHGLIIKQHRDV 237 (317)
Q Consensus 190 ~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~-~~~-ly~~g~~~~~~yd~~~ 237 (317)
...+..||+.+.+.... +.......++.. +++ +|+. .+.++.+|.+.
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~ 163 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMDPEA 163 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEETTT
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEECCC
Confidence 36799999988764322 211112223322 344 5555 56777887765
No 190
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=83.53 E-value=19 Score=30.27 Aligned_cols=105 Identities=7% Similarity=-0.126 Sum_probs=54.8
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE----cCeEEEEeC--cEEEEecCCceEEEeccccccccccE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV----HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 253 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~----~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~ 253 (317)
+++..+.|+....+..||..+..-............... ++.+++.++ +.+..||..+-+.+..+.. .....
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~ 174 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL--PERCY 174 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC--SSCEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec--CCCce
Confidence 566666776667899999988875543322111122222 445555543 7888998776332222221 11222
Q ss_pred EEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 254 AMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 254 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
.+....+.+++.++ ...+.+||.......+..+
T Consensus 175 ~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~~~~~ 207 (368)
T 3mmy_A 175 CADVIYPMAVVATA-------------ERGLIVYQLENQPSEFRRI 207 (368)
T ss_dssp EEEEETTEEEEEEG-------------GGCEEEEECSSSCEEEEEC
T ss_pred EEEecCCeeEEEeC-------------CCcEEEEEeccccchhhhc
Confidence 33444554444333 1256677877653344444
No 191
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=83.40 E-value=21 Score=30.64 Aligned_cols=130 Identities=11% Similarity=0.005 Sum_probs=64.4
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE----CCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEE--cC
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI----GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIV--HD 220 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~----~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~--~~ 220 (317)
..+.+||.++.+-... +... ......+.+ ++.+++.|+....+..||..+.+-... .........+.. ++
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~ 252 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGH-GADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSG 252 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECC-SSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CcEEEEeCCCCeEEEE--EcCC-CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCC
Confidence 4677888877654321 1101 111112212 456777777677899999988764322 111111111222 34
Q ss_pred eEEEEeC--cEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 221 SVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 221 ~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+++.++ +.+..||...-+.+..............+.+ ++++++.|+.+ ..|.+||..++
T Consensus 253 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d------------~~i~vwd~~~~ 316 (354)
T 2pbi_B 253 DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND------------YTINVWDVLKG 316 (354)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT------------SCEEEEETTTC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC------------CcEEEEECCCC
Confidence 5555543 6788888766333322221011112222222 56666666532 25778888665
No 192
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.20 E-value=18 Score=29.79 Aligned_cols=55 Identities=9% Similarity=0.126 Sum_probs=34.5
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEE--EECCEEEEEecCceeEEEEeCCCCcE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGV--VIGGKVHVLHKGLSTVQVLDHMGLGW 203 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~--~~~g~lyv~gG~~~~v~~yd~~~~~W 203 (317)
.++.++|.++++-..+-.+... ...-..+ .-+++..+.|+....+..||..+++-
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 4677888888776554333222 2122222 23677778888677899999988763
No 193
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.10 E-value=35 Score=33.01 Aligned_cols=146 Identities=9% Similarity=-0.002 Sum_probs=78.3
Q ss_pred Cce-EEEEEeCCCCceEEEeCCCCCEeecCCCCcccccc--CCe-eEEEe---CCEEEEEcCcCCCCCCCCCCCCCcccc
Q 021080 55 ENL-LCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHL--AHF-GVVST---AGKLFVLGGGSDAVDPLTGDQDGSFAT 127 (317)
Q Consensus 55 ~~~-l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r--~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~ 127 (317)
++. |+|... ...+.+||+.++++......+..+... ... ++... ++.|+|..-.
T Consensus 76 ~g~~lWigt~--~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~----------------- 136 (781)
T 3v9f_A 76 VQPVIWIATQ--RAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYY----------------- 136 (781)
T ss_dssp SSSEEEEEES--SSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESS-----------------
T ss_pred CCCEEEEEeC--CCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECC-----------------
Confidence 445 777542 126899999999988763221110001 111 23332 4677764311
Q ss_pred cceeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCC-----CCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCc
Q 021080 128 NEVWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPD-----LHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLG 202 (317)
Q Consensus 128 ~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~-----~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~ 202 (317)
..+.+||+.++++..+.. ++.. ....-..--+|.||+... ...+..||+.+++
T Consensus 137 --------------------~gl~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lwigt~-~~Gl~~~~~~~~~ 194 (781)
T 3v9f_A 137 --------------------RGIEYLDIATGKFTHYNKSTVPALPSE-QTWTATEAEDGKLYIGHV-EGGLSILSLNDKS 194 (781)
T ss_dssp --------------------SCEEEEETTTTEEEEESTTTCTTCSCC-CEEEEEEEETTEEEEEET-TTEEEEEETTTTE
T ss_pred --------------------CCeeEEECCCCeEEeeccCcccCCCcc-ceEEEEECCCCCEEEEec-CCCeEEEcCCCCc
Confidence 235567777777765532 2222 211112224888888532 2358999999988
Q ss_pred EEeccCCc------cCCcEE--EE--cCeEEEEeCcEEEEecCCc--eEEE
Q 021080 203 WTVEDYGW------LQGPMA--IV--HDSVYLMSHGLIIKQHRDV--RKVV 241 (317)
Q Consensus 203 W~~~~~~~------~~~~~~--~~--~~~ly~~g~~~~~~yd~~~--W~~v 241 (317)
+....... +...+. .. ++.|++...+.++.||+++ ++..
T Consensus 195 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~Gl~~~d~~~~~~~~~ 245 (781)
T 3v9f_A 195 VKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNF 245 (781)
T ss_dssp EEEECC--------CCSSEEEEEECTTCCEEEEETTEEEEEETTTTEEEC-
T ss_pred eEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeCCcHheECCCCCcEEEE
Confidence 87653211 111111 11 5678877666899999765 6544
No 194
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=82.75 E-value=8.7 Score=32.17 Aligned_cols=65 Identities=8% Similarity=-0.081 Sum_probs=42.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEE-EcCeEEEEeCcEEEEecCCc--eEEEecc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAI-VHDSVYLMSHGLIIKQHRDV--RKVVASA 244 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~-~~~~ly~~g~~~~~~yd~~~--W~~v~~~ 244 (317)
++.||++.-....+.+||+.++.-...........++. -++++++...+.++.||+++ .+.+...
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEec
Confidence 47899987766789999998876544432111112222 25678887788899998765 6655443
No 195
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.61 E-value=14 Score=31.10 Aligned_cols=99 Identities=7% Similarity=-0.042 Sum_probs=50.4
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--cCeEEEEeC--c--------------EEEEecCCceEEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMSH--G--------------LIIKQHRDVRKVV 241 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g~--~--------------~~~~yd~~~W~~v 241 (317)
++.+++.++....+..||..+.+-...-........+.. +++..++++ + .+..||....+.+
T Consensus 229 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 229 DLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 666667776667899999987653322111111111111 333333332 1 5777777664444
Q ss_pred eccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 242 ASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 242 ~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..+.. .......+.+ ++++++.|+.+ ..|.+||++++
T Consensus 309 ~~~~~--~~~~v~~~~~s~~~~~l~s~~~d------------g~v~iw~~~~~ 347 (369)
T 3zwl_B 309 GRVQG--HFGPLNTVAISPQGTSYASGGED------------GFIRLHHFEKS 347 (369)
T ss_dssp EEEEC--CSSCEEEEEECTTSSEEEEEETT------------SEEEEEEECHH
T ss_pred hheec--ccCcEEEEEECCCCCEEEEEcCC------------CeEEEEECccc
Confidence 43331 1111122222 56777777643 25778888765
No 196
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=82.59 E-value=21 Score=30.10 Aligned_cols=130 Identities=14% Similarity=-0.065 Sum_probs=66.2
Q ss_pred ceeEEeeCCCCceeeC-CCCCccCCCceEEEEECC-EEEEEecCceeEEEEeCCCC---cEEeccCCccCCcEEE-EcCe
Q 021080 148 SQAEMYDPEKDVWVPI-PDLHRTHNSACTGVVIGG-KVHVLHKGLSTVQVLDHMGL---GWTVEDYGWLQGPMAI-VHDS 221 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~-~~~p~~~r~~~~~~~~~g-~lyv~gG~~~~v~~yd~~~~---~W~~~~~~~~~~~~~~-~~~~ 221 (317)
..+++||+.+.+.+.+ ..+..+ ..-+..-+| .||+.-.....|.+||+... ..+.+...+.+..+++ -+|.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVP---GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSC
T ss_pred ceEEEEeCCCCEEEEeccCCccC---cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCC
Confidence 4577788877765443 122222 111122244 58888554568999998753 3333222111112222 2568
Q ss_pred EEEEeC------------cEEEEecCCc-eEEEecccccc-ccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEe
Q 021080 222 VYLMSH------------GLIIKQHRDV-RKVVASASEFR-RRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVL 287 (317)
Q Consensus 222 ly~~g~------------~~~~~yd~~~-W~~v~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~y 287 (317)
||+... +.+..||++. -...-..+... .....+++..+++|||.+.. .+.|.+|
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~------------~~~i~~~ 309 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF------------HGSVGIL 309 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS------------CSEEEEE
T ss_pred EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC------------CCceEEE
Confidence 998853 4688999865 22222222100 12223344568899986531 2367788
Q ss_pred ecCCC
Q 021080 288 TVGAE 292 (317)
Q Consensus 288 d~~~~ 292 (317)
++..+
T Consensus 310 ~~~~~ 314 (322)
T 2fp8_A 310 VYDKK 314 (322)
T ss_dssp EC---
T ss_pred ecccc
Confidence 87654
No 197
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=82.59 E-value=14 Score=31.12 Aligned_cols=57 Identities=14% Similarity=0.250 Sum_probs=30.3
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCce-EEEEE-C--CEEEEEecCceeEEEEeCCCC-cEEe
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSAC-TGVVI-G--GKVHVLHKGLSTVQVLDHMGL-GWTV 205 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~-~~~~~-~--g~lyv~gG~~~~v~~yd~~~~-~W~~ 205 (317)
..+.+||.++.+|..+..+... ...- +.+.. + +.+.+.|+....+..||..++ .|..
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred CEEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 3456677776666543222111 1111 22222 2 567777776667888888765 4653
No 198
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=82.14 E-value=22 Score=29.93 Aligned_cols=63 Identities=8% Similarity=-0.108 Sum_probs=32.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--------cCeEEEEeC--cEEEEecCCceEEEe
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--------HDSVYLMSH--GLIIKQHRDVRKVVA 242 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--------~~~ly~~g~--~~~~~yd~~~W~~v~ 242 (317)
++.+.+.|+....+..||.....-..+.........+.. ++.+++.++ +.+..+|.++.+...
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 190 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA 190 (319)
T ss_dssp TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe
Confidence 566777777666788888876543333211110011111 222333332 678888887754443
No 199
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=82.12 E-value=24 Score=30.50 Aligned_cols=101 Identities=8% Similarity=-0.035 Sum_probs=54.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEec-cCCcc-------CCcEEE--EcCeEEEEeC--cEEEEecCCceEEEecc---
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWL-------QGPMAI--VHDSVYLMSH--GLIIKQHRDVRKVVASA--- 244 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~-------~~~~~~--~~~~ly~~g~--~~~~~yd~~~W~~v~~~--- 244 (317)
+++.++.|+....+..||..++.-... ..... ....+. .++++.+.+. +.++.||...-+.+..+
T Consensus 260 ~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 339 (380)
T 3iz6_a 260 DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL 339 (380)
T ss_dssp TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS
T ss_pred CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc
Confidence 667777777667788999987753221 11000 112222 2566666664 67888887663333222
Q ss_pred ccc-cccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 245 SEF-RRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 245 ~~~-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
... ..+.......-+++.++.|+.++ .|.+|+++..
T Consensus 340 ~~~h~~~v~~l~~s~dg~~l~sgs~D~------------~i~iW~~~~~ 376 (380)
T 3iz6_a 340 QNSHEGRISCLGLSSDGSALCTGSWDK------------NLKIWAFSGH 376 (380)
T ss_dssp CSSCCCCCCEEEECSSSSEEEEECTTS------------CEEEEECCSS
T ss_pred cCCCCCceEEEEECCCCCEEEEeeCCC------------CEEEEecCCC
Confidence 110 11122222233677778787542 4667777654
No 200
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=81.42 E-value=26 Score=30.43 Aligned_cols=24 Identities=21% Similarity=-0.068 Sum_probs=18.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCcE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGW 203 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W 203 (317)
++++++.|+....+..||..++.-
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcE
Confidence 677888887677799999887753
No 201
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.31 E-value=43 Score=32.82 Aligned_cols=113 Identities=8% Similarity=0.056 Sum_probs=64.1
Q ss_pred ceeEEeeCCCCceeeC--CCCCccCCCceEEEEE---CCEEEEEe-cCceeEEEEeCCCCcEEeccC-Ccc-CCcEEEE-
Q 021080 148 SQAEMYDPEKDVWVPI--PDLHRTHNSACTGVVI---GGKVHVLH-KGLSTVQVLDHMGLGWTVEDY-GWL-QGPMAIV- 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~--~~~p~~~r~~~~~~~~---~g~lyv~g-G~~~~v~~yd~~~~~W~~~~~-~~~-~~~~~~~- 218 (317)
..++++|+....-+.+ ..+..| .++++ +|.||+.- |....|+++++....=..+-. ... +..+++-
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~~P-----~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~ 567 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGSKP-----RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDL 567 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCE-----EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEET
T ss_pred CeEEEEeCCCCeEEEEEeCCCCCc-----ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEec
Confidence 3455566554443333 233333 33333 58999986 334679999987654333322 111 2233332
Q ss_pred -cCeEEEEeC--cEEEEecCCc---eEEEeccccccccccEEEEEECCeEEEEeC
Q 021080 219 -HDSVYLMSH--GLIIKQHRDV---RKVVASASEFRRRIGFAMIGMGDDIYVIGG 267 (317)
Q Consensus 219 -~~~ly~~g~--~~~~~yd~~~---W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG 267 (317)
+++||+.+. ..|..++.+. ...+.... .....++++..+++||+.--
T Consensus 568 ~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~--~l~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 568 LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK--RLAHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEECTT--TTSSEEEEEEETTEEEEEET
T ss_pred CCCeEEEEeCCCCcEEEEecCCCceEEEecCCC--ccCCCCEEEEeCCEEEEEEC
Confidence 689999986 6888888765 33332211 11234567778999999863
No 202
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=81.31 E-value=11 Score=31.76 Aligned_cols=26 Identities=12% Similarity=0.090 Sum_probs=19.4
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEec
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~ 206 (317)
+.+.+.|+....+..||+.+..|...
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGTWEKS 96 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSCCCEE
T ss_pred CCEEEEEECCCEEEEEECCCCcceEE
Confidence 66777777667799999988776543
No 203
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.20 E-value=26 Score=30.22 Aligned_cols=58 Identities=7% Similarity=-0.143 Sum_probs=32.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE-eccCCccCC-cEEEE-cC-eEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQG-PMAIV-HD-SVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~-~~~~~-~~-~ly~~g~--~~~~~yd~~~ 237 (317)
++++++.|+....+..||..+.+-. .+....... .++.. ++ .+++.++ +.+..|+...
T Consensus 274 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 274 DEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp CSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred CCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 6777777776678999998876532 222111111 22222 33 4555554 5677777554
No 204
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.03 E-value=26 Score=30.22 Aligned_cols=175 Identities=13% Similarity=0.038 Sum_probs=92.9
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEE--eCCEEEEEcCcCCCCCCCCCCCCCcccccceeE
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVS--TAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
+++|++.-. ..+..+++.......+..-. ....+++. .++.||+..-..
T Consensus 44 ~~~ll~~~~---~~I~~i~~~g~~~~~~~~~~-----~~~~~l~~d~~~~~ly~~D~~~--------------------- 94 (349)
T 3v64_C 44 EPVLLFANR---IDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDVTL--------------------- 94 (349)
T ss_dssp CCEEEEECB---SCEEEECTTSCCEEEEECSC-----SCEEEEEEETTTTEEEEEETTT---------------------
T ss_pred CceeEeecc---cceEEEeCCCCeeEEeecCC-----CceEEEEEeccccEEEEEeccC---------------------
Confidence 445544432 56788888777666543211 11233333 357888876321
Q ss_pred ecccCCCCCCCcCCCceeEEeeCCCCceeeC--CCCCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEeccC
Q 021080 133 YDPVTRGFTSCRKSISQAEMYDPEKDVWVPI--PDLHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVEDY 208 (317)
Q Consensus 133 ~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~ 208 (317)
..+.++++....-+.+ ..+..+ . ..++ .++.||+.-.....|+++++....-..+..
T Consensus 95 ---------------~~I~r~~~~g~~~~~~~~~~~~~p---~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 95 ---------------DRILRANLNGSNVEEVVSTGLESP---G-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp ---------------TEEEEEETTSCSCEEEECSSCSCC---C-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred ---------------CceEEEecCCCCceEEEeCCCCCc---c-EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 3455555555443333 122222 1 2233 378999997766789999987654333221
Q ss_pred -C-ccCCcEEEE--cCeEEEEeC---cEEEEecCCc--eEEEeccccccccccEEEEE--ECCeEEEEeCcccCCCCcee
Q 021080 209 -G-WLQGPMAIV--HDSVYLMSH---GLIIKQHRDV--RKVVASASEFRRRIGFAMIG--MGDDIYVIGGVIGPDRWNWD 277 (317)
Q Consensus 209 -~-~~~~~~~~~--~~~ly~~g~---~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~ 277 (317)
. ..+..+++- ++.||..+. ..+++++.+. -+.+..-. .....+++. .+++||+.-..
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---~~~PnGla~d~~~~~lY~aD~~--------- 223 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVDAK--------- 223 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSS---CSCEEEEEEETTTTEEEEEETT---------
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECC---CCCcceEEEeCCCCEEEEEECC---------
Confidence 1 112333443 678999874 5788888765 22221111 112234444 36788887431
Q ss_pred cccCcceeEeecCCC
Q 021080 278 IKPMSDVDVLTVGAE 292 (317)
Q Consensus 278 ~~~~~~v~~yd~~~~ 292 (317)
...|+++|++..
T Consensus 224 ---~~~I~~~~~dG~ 235 (349)
T 3v64_C 224 ---HHVIERANLDGS 235 (349)
T ss_dssp ---TTEEEEEETTSC
T ss_pred ---CCEEEEEeCCCC
Confidence 235666666543
No 205
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.91 E-value=23 Score=29.38 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=29.9
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE--C--CEEEEEecCceeEEEEeCCCC
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--G--GKVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~--g~lyv~gG~~~~v~~yd~~~~ 201 (317)
..+.+||.++++|..+..+... ......+.+ + +.+.+.|+....+..||..+.
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CEEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 4566777777766554332211 112223333 2 566677776677888888765
No 206
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=79.46 E-value=30 Score=29.95 Aligned_cols=102 Identities=12% Similarity=-0.144 Sum_probs=52.6
Q ss_pred EEEEEecCceeEEEEeCCCCcEEecc---CCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEecc-ccc-ccccc
Q 021080 182 KVHVLHKGLSTVQVLDHMGLGWTVED---YGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASA-SEF-RRRIG 252 (317)
Q Consensus 182 ~lyv~gG~~~~v~~yd~~~~~W~~~~---~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~-~~~-~~r~~ 252 (317)
.+++.|+....+..||..+++....- ........... ++.+++.++ +.+..||..+.+.+..+ ... ..+..
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 47777776677999999887644221 11111112222 454444443 78999998874444433 110 11122
Q ss_pred EEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 253 FAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 253 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.....-++++++.|..... -..+.+||+.+.
T Consensus 225 ~~~~~~~~~~l~~g~~~~~---------d~~i~iwd~~~~ 255 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMS---------ERQVALWDTKHL 255 (402)
T ss_dssp EEEECSTTEEEEEEECTTC---------CEEEEEEETTBC
T ss_pred EEEEcCCCcEEEEeccCCC---------CceEEEEcCccc
Confidence 2222335676666621111 136778888764
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=78.99 E-value=29 Score=29.41 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=41.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEE-EEcCeEEEEeCcEEEEecCCc--eEEEec
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMA-IVHDSVYLMSHGLIIKQHRDV--RKVVAS 243 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~-~~~~~ly~~g~~~~~~yd~~~--W~~v~~ 243 (317)
++.+|+++.....+..||+.++.............++ .-+|++++.....++.||+++ .+.+..
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEee
Confidence 3688988765568999999887755443211111222 236888888777899999765 665544
No 208
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=78.64 E-value=34 Score=30.10 Aligned_cols=58 Identities=3% Similarity=-0.202 Sum_probs=32.1
Q ss_pred CCEEEEEecCceeEEEEeCCCCc----EEeccCCccCCcEEEE--cC-eEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG----WTVEDYGWLQGPMAIV--HD-SVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~----W~~~~~~~~~~~~~~~--~~-~ly~~g~--~~~~~yd~~~ 237 (317)
++.+++.++....+..||+.+.. -..+............ ++ .+++.++ +.+..||...
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 46677777767789999998652 1111111011111222 23 3666654 7788888765
No 209
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=78.50 E-value=26 Score=30.50 Aligned_cols=58 Identities=12% Similarity=-0.076 Sum_probs=33.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE---cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV---HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~---~~~ly~~g~--~~~~~yd~~~ 237 (317)
++...+.|+....+..||..+++-...-........+.. ++++++.++ +.+..||.++
T Consensus 176 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~ 238 (393)
T 1erj_A 176 SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238 (393)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 556666666667789999988764322111111111122 456666654 6788888766
No 210
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=78.42 E-value=44 Score=31.24 Aligned_cols=105 Identities=10% Similarity=-0.100 Sum_probs=57.4
Q ss_pred CCEEEEEecC--ceeEEEEeCCCCcEEeccCCcc----------CCcEEEE-cCeEEEEe---CcEEEEecCCc--eEEE
Q 021080 180 GGKVHVLHKG--LSTVQVLDHMGLGWTVEDYGWL----------QGPMAIV-HDSVYLMS---HGLIIKQHRDV--RKVV 241 (317)
Q Consensus 180 ~g~lyv~gG~--~~~v~~yd~~~~~W~~~~~~~~----------~~~~~~~-~~~ly~~g---~~~~~~yd~~~--W~~v 241 (317)
||++|+.+.. ...++.+|+.++++..+..... ....+.. ++++++.. ...++.+|.+. .+.+
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDA 331 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEEC
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEe
Confidence 7788877762 3379999998888887654321 1122332 56666554 25677777653 5544
Q ss_pred eccccccccccEEE-EEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeec
Q 021080 242 ASASEFRRRIGFAM-IGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 242 ~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
.... . ....+ ..-++++++..+... ....++.+|++++ +.+.+
T Consensus 332 ~~~~---~-~~~~~~s~~~~~~~~~~~~~~---------~~~~i~~~d~~~g--~~~~l 375 (662)
T 3azo_A 332 AGPW---T-EWAATLTVSGTRAVGVAASPR---------TAYEVVELDTVTG--RARTI 375 (662)
T ss_dssp CSSC---C-EEEEEEEEETTEEEEEEEETT---------EEEEEEEEETTTC--CEEEE
T ss_pred cCCC---C-eEEEEEecCCCEEEEEEcCCC---------CCCEEEEEECCCC--ceEEe
Confidence 3221 1 11122 334566665543221 1236777777776 65555
No 211
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=78.04 E-value=38 Score=31.62 Aligned_cols=105 Identities=9% Similarity=0.040 Sum_probs=49.1
Q ss_pred CceeEEEEeCCCCcEEeccCC---ccCCcEE-EEcCeE-EEEe--CcEEEEecCCceEEEecccc----ccccccEEEEE
Q 021080 189 GLSTVQVLDHMGLGWTVEDYG---WLQGPMA-IVHDSV-YLMS--HGLIIKQHRDVRKVVASASE----FRRRIGFAMIG 257 (317)
Q Consensus 189 ~~~~v~~yd~~~~~W~~~~~~---~~~~~~~-~~~~~l-y~~g--~~~~~~yd~~~W~~v~~~~~----~~~r~~~~~~~ 257 (317)
....+...|........+... ...+... .-+++. |+.. .+.+..+|.++-+.+...+. +.+..+..+..
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~ 397 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH 397 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE
T ss_pred CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeEC
Confidence 446677777766543222211 1111111 224454 3433 27888899887333322221 12222222222
Q ss_pred E-CCeEEEEeCcccCCCCceecccCcceeEeecCCCC---CceeecccCCC
Q 021080 258 M-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER---PTWRQVSPMTR 304 (317)
Q Consensus 258 ~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~---~~W~~~~~~p~ 304 (317)
- ++.+|+.+-... ..|.++|..+.. ..|+.+..++.
T Consensus 398 p~~g~v~~t~~~g~-----------~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 398 PTFGPVWATSHMGD-----------DSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp TTTEEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCCCcEEEeCCCCC-----------CeEEEecCCCCCCccccCEEEEEEec
Confidence 2 366777653211 256777776531 12877765543
No 212
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=77.53 E-value=29 Score=28.60 Aligned_cols=56 Identities=14% Similarity=0.014 Sum_probs=36.7
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEEc----CeEEEEeCcEEEEecCCc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIVH----DSVYLMSHGLIIKQHRDV 237 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~----~~ly~~g~~~~~~yd~~~ 237 (317)
-+|+||+.. ...+.+||+.......+..... ...++.+ +.||+...+.++.+++++
T Consensus 227 ~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~ 286 (296)
T 3e5z_A 227 AGGLIWASA--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNV 286 (296)
T ss_dssp TTSCEEEEE--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSC
T ss_pred CCCCEEEEc--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccc
Confidence 478898886 4679999998665555543222 2333332 268888888888887654
No 213
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=77.51 E-value=56 Score=31.97 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=58.2
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccC-Ccc-CCcEEE--EcCeEEEEeC---cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDY-GWL-QGPMAI--VHDSVYLMSH---GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~-~~~-~~~~~~--~~~~ly~~g~---~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
+++||+.-.....|+++++....-..+-. ... +..+++ .++.||+.+. ..|.+.+.+. =+.+..-. ..
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~---l~ 558 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN---IQ 558 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS---CS
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC---CC
Confidence 67999998767789999998665444421 111 233444 2588999974 5688887765 22222111 11
Q ss_pred ccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 251 IGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 251 ~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.-.+++.- +++||+.-. ..+.|++++++..
T Consensus 559 ~P~GLavD~~~~~LYwaD~------------~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDS------------KLHSISSIDVNGG 590 (791)
T ss_dssp CEEEEEEETTTTEEEEEET------------TTTEEEEEETTSC
T ss_pred CceEEEEecCCCeEEEEeC------------CCCcEEEEecCCC
Confidence 22344443 789999843 1236777777654
No 214
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.49 E-value=31 Score=29.04 Aligned_cols=107 Identities=7% Similarity=-0.045 Sum_probs=51.0
Q ss_pred CCEEEEEecCceeEEEEeCCCC-----cEEeccCCccC-CcE--EEE--cCeEEEEeC--cEEEEecCC----ceEEEec
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGL-----GWTVEDYGWLQ-GPM--AIV--HDSVYLMSH--GLIIKQHRD----VRKVVAS 243 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~-----~W~~~~~~~~~-~~~--~~~--~~~ly~~g~--~~~~~yd~~----~W~~v~~ 243 (317)
++++.+.|+....+..||.... .+..+..+..+ ..+ +.. ++++++.++ +.++.+|.. .++.+..
T Consensus 69 ~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEE
Confidence 5677777776667888887532 22222111110 111 111 345444443 667777763 1555544
Q ss_pred cccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccC
Q 021080 244 ASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPM 302 (317)
Q Consensus 244 ~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~ 302 (317)
+.. .. .....+.+ ++.+++.|+.++ .|.+||..++ .|+.+..+
T Consensus 149 ~~~-h~-~~v~~v~~~p~~~~l~s~s~D~------------~i~iW~~~~~--~~~~~~~~ 193 (330)
T 2hes_X 149 LQE-HS-QDVKHVIWHPSEALLASSSYDD------------TVRIWKDYDD--DWECVAVL 193 (330)
T ss_dssp ECC-CS-SCEEEEEECSSSSEEEEEETTS------------CEEEEEEETT--EEEEEEEE
T ss_pred ecc-CC-CceEEEEECCCCCEEEEEcCCC------------eEEEEECCCC--CeeEEEEc
Confidence 331 11 11112222 566667666432 4667777766 66655444
No 215
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=76.78 E-value=30 Score=28.48 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=19.8
Q ss_pred CCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccCC
Q 021080 259 GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPMT 303 (317)
Q Consensus 259 ~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p 303 (317)
++++++.||.+ ..|.+||++++ ..|+.+..++
T Consensus 317 ~~~~l~s~~~d------------g~v~iw~~~~~-~~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDD------------GKVRLWKATYS-NEFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETT------------SCEEEEEECTT-SCEEEEEEEC
T ss_pred CCCEEEEecCC------------CcEEEEecCcC-cchhheeehc
Confidence 45666666633 25788888774 2677766543
No 216
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=76.48 E-value=40 Score=29.74 Aligned_cols=86 Identities=10% Similarity=0.071 Sum_probs=51.8
Q ss_pred CCEEEEEe-cCceeEEEEeCCCCcEEec-cCCcc-CCcEEEE--cCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLH-KGLSTVQVLDHMGLGWTVE-DYGWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~g-G~~~~v~~yd~~~~~W~~~-~~~~~-~~~~~~~--~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
+|.||+.- |....|+++++....=..+ ..... +..++.- +++||+.+. ..|+.+|.+. -+.+...+. ...
T Consensus 213 ~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~-~l~ 291 (400)
T 3p5b_L 213 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK-RLA 291 (400)
T ss_dssp TTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS-TTS
T ss_pred cCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC-CCC
Confidence 68999986 3346799999865432222 22111 2333433 679999985 6888888765 333322211 122
Q ss_pred ccEEEEEECCeEEEEe
Q 021080 251 IGFAMIGMGDDIYVIG 266 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~G 266 (317)
...+++..++.||+..
T Consensus 292 ~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 292 HPFSLAVFEDKVFWTD 307 (400)
T ss_dssp SEEEEEEETTEEEEEE
T ss_pred CCEEEEEeCCEEEEec
Confidence 3456777899999986
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=76.40 E-value=41 Score=29.76 Aligned_cols=27 Identities=11% Similarity=0.019 Sum_probs=20.6
Q ss_pred CCEEEEEec-CceeEEEEeCCCCcEEec
Q 021080 180 GGKVHVLHK-GLSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 180 ~g~lyv~gG-~~~~v~~yd~~~~~W~~~ 206 (317)
+|.||+... ....|.++|+.++.-..+
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 578999976 678899999766665443
No 218
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=75.97 E-value=37 Score=29.03 Aligned_cols=88 Identities=9% Similarity=-0.107 Sum_probs=47.0
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCce-EEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCCcc-CCcEEEE----cC
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSAC-TGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAIV----HD 220 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~-~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~-~~~~~~~----~~ 220 (317)
.+.+||..+.+....-..... .... +.... ++.+++.++....+..||..+.....+..... ...+..+ ++
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp CEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT
T ss_pred eEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC
Confidence 466677776665544332111 1122 23333 44677777766789999998877665543221 0111111 34
Q ss_pred eEEEEeC--cEEEEecCCc
Q 021080 221 SVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 221 ~ly~~g~--~~~~~yd~~~ 237 (317)
.+++.++ +.++.||...
T Consensus 176 ~~l~~~~~d~~i~i~d~~~ 194 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGLDG 194 (383)
T ss_dssp TEEEEEETTSEEEEEETTS
T ss_pred CEEEEECCCCCEEEEECCC
Confidence 5444443 6788888743
No 219
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=75.94 E-value=27 Score=29.83 Aligned_cols=58 Identities=7% Similarity=-0.234 Sum_probs=32.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE-----cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV-----HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~-----~~~ly~~g~--~~~~~yd~~~ 237 (317)
++.+++.++....+..||..+..-...-........... ++.+++.++ +.+..||.++
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 455777777667899999988764333221111111111 233444443 6788888765
No 220
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=75.59 E-value=22 Score=28.17 Aligned_cols=96 Identities=9% Similarity=0.025 Sum_probs=55.8
Q ss_pred EEEECCEEEEEecCceeEEEEeCCC---C-------cEEeccCCccCCcEEE--EcCeEEEEeCcEEEEecCCc-e----
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMG---L-------GWTVEDYGWLQGPMAI--VHDSVYLMSHGLIIKQHRDV-R---- 238 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~---~-------~W~~~~~~~~~~~~~~--~~~~ly~~g~~~~~~yd~~~-W---- 238 (317)
++..+|++|++-| +.+++++... + .|..++ ....+|. .++++|++-|+..+.|+..+ .
T Consensus 11 ~~~~~g~~~fFkg--~~~w~~~~~~~~~gyP~~I~~~w~glP---~~iDAa~~~~~g~~yfFkg~~yw~~~~~~~~~gyP 85 (196)
T 3c7x_A 11 VAMLRGEMFVFKE--RWFWRVRNNQVMDGYPMPIGQFWRGLP---ASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYP 85 (196)
T ss_dssp EEEETTEEEEEET--TEEEEEETTEECTTCSEEHHHHSTTCC---SSCCEEEECTTSCEEEEETTEEEEEETTEECTTCS
T ss_pred EEEcCCEEEEEEC--CEEEEEECCccCCCCceEhhHhccCCC---CCccEEEEeCCCcEEEecCCEEEEEeCCcccCCCC
Confidence 4467999999976 4466664321 1 122222 1333443 36889999999999998653 1
Q ss_pred EEEec----cccccccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 239 KVVAS----ASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 239 ~~v~~----~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+.+.. +| ..+..+++.. .++++|++-| +..++||..++
T Consensus 86 k~I~~~~~glP--~~~IDAA~~~~~~g~~yfFkG--------------~~yw~yd~~~~ 128 (196)
T 3c7x_A 86 KHIKELGRGLP--TDKIDAALFWMPNGKTYFFRG--------------NKYYRFNEELR 128 (196)
T ss_dssp EEGGGTCBSCC--SSCCSEEEEETTTTEEEEEET--------------TEEEEEETTTT
T ss_pred eEhhhcCCCCC--CCcccEEEEEccCCEEEEEEC--------------CEEEEEeCCcc
Confidence 12222 22 1233344432 2689999976 25678887664
No 221
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=75.19 E-value=33 Score=28.12 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=27.4
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCe-eEEE-eCCEEEEEcCcC
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHF-GVVS-TAGKLFVLGGGS 111 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~-~~~~-~~~~iyv~GG~~ 111 (317)
++.|. .|. ...+..+|..+++..+.-.+... .... +++. -+++.++.|+.+
T Consensus 36 ~~~lA-vg~--D~tV~iWd~~tg~~~~~~~~~~~---~~~V~~v~~~~~~~~l~sgs~D 88 (318)
T 4ggc_A 36 GNVLA-VAL--DNSVYLWSASSGDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSS 88 (318)
T ss_dssp TSEEE-EEE--TTEEEEEETTTCCEEEEEECCST---TCCEEEEEECTTSSEEEEEETT
T ss_pred CCEEE-EEe--CCEEEEEECCCCCEEEEEEecCC---CCeEEEEEECCCCCEEEEEECC
Confidence 44443 343 35799999999887654333321 1112 2222 245666777653
No 222
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=75.01 E-value=23 Score=31.34 Aligned_cols=58 Identities=12% Similarity=-0.009 Sum_probs=34.6
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCcc----CCcEEEE-cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL----QGPMAIV-HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~----~~~~~~~-~~~ly~~g~--~~~~~yd~~~ 237 (317)
++.+++.|+....|..+|..++....+...-. ...++.. ++.+++.++ +.+..+|.+.
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 56666777756678899998876554432211 1122222 556666665 5777777654
No 223
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=74.86 E-value=31 Score=27.67 Aligned_cols=142 Identities=9% Similarity=-0.127 Sum_probs=63.9
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEE-ECCE-EEEEec--CceeEEEEeCCCCcEEeccCCccCCcEEEE--cCe
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVV-IGGK-VHVLHK--GLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDS 221 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~-~~g~-lyv~gG--~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ 221 (317)
..++.+|..+.+-..+..... ...... -+++ |++.++ ....++.+|..+.....+............ +++
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGR 185 (297)
T ss_dssp CEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSS
T ss_pred ceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCC
Confidence 456666666655444432211 111122 2443 554444 233677777877776655433221111222 444
Q ss_pred -EEEEeC----cEEEEecCCc--eEEEeccccccccccEEEE-EECCeEEEEeCcccCCCCceecccCcceeEeecCCCC
Q 021080 222 -VYLMSH----GLIIKQHRDV--RKVVASASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAER 293 (317)
Q Consensus 222 -ly~~g~----~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 293 (317)
+++.+. ..++.++... ...+.... . ....+. .-+++.+++++........ +......+++||++++
T Consensus 186 ~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~-~~~~~~~s~dg~~l~~~~~~~~~~~~-~~~~~~~l~~~d~~~~- 259 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVRVDGSSVERITDSA---Y-GDWFPHPSPSGDKVVFVSYDADVFDH-PRDLDVRVQLMDMDGG- 259 (297)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCEEECCCCS---E-EEEEEEECTTSSEEEEEEEETTCCSC-CSSEEEEEEEEETTSC-
T ss_pred EEEEEecCCCCccEEEECCCCCCcEEEecCC---c-ccCCeEECCCCCEEEEEEcCCCCCcc-cccCceEEEEEecCCC-
Confidence 444432 4666666443 44443222 1 111122 2255555555443221000 0001246899999887
Q ss_pred Cceeecc
Q 021080 294 PTWRQVS 300 (317)
Q Consensus 294 ~~W~~~~ 300 (317)
+...+.
T Consensus 260 -~~~~~~ 265 (297)
T 2ojh_A 260 -NVETLF 265 (297)
T ss_dssp -SCEEEE
T ss_pred -Cceeee
Confidence 665553
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=74.56 E-value=38 Score=28.60 Aligned_cols=81 Identities=7% Similarity=-0.088 Sum_probs=45.5
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc-----CCcEEEE--cCe
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-----QGPMAIV--HDS 221 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~-----~~~~~~~--~~~ 221 (317)
.+.+||+.+++.+.+. .+. ....-+..-+|++++.. ...+..||+.+++...+..... ......+ +|+
T Consensus 72 ~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~ 146 (326)
T 2ghs_A 72 ELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA 146 (326)
T ss_dssp EEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC
T ss_pred EEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC
Confidence 4666777666544332 111 11222334588888864 3459999999888776543211 1111122 567
Q ss_pred EEEEeC--------cEEEEec
Q 021080 222 VYLMSH--------GLIIKQH 234 (317)
Q Consensus 222 ly~~g~--------~~~~~yd 234 (317)
+|+... +.++.++
T Consensus 147 l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 147 LWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EEEEEEETTCCTTCEEEEEEE
T ss_pred EEEEeCCCcCCCCceEEEEEe
Confidence 887642 4788888
No 225
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=74.26 E-value=33 Score=32.59 Aligned_cols=85 Identities=12% Similarity=0.169 Sum_probs=45.9
Q ss_pred CCEEEEEecCceeEEEEeCCCC--cE-EeccC-Ccc----CCcEEE---EcCeEEEEeCcEEEEecCCceEEEeccccc-
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGL--GW-TVEDY-GWL----QGPMAI---VHDSVYLMSHGLIIKQHRDVRKVVASASEF- 247 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~--~W-~~~~~-~~~----~~~~~~---~~~~ly~~g~~~~~~yd~~~W~~v~~~~~~- 247 (317)
++++|++-| +..++|+..+- -+ ..+.. ..+ ...+|. .++++|++.|+..+.||..+-+....-|..
T Consensus 500 ~~k~yFFkG--~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~~ywryd~~~~~vd~gYPk~i 577 (631)
T 1ck7_A 500 EEKAVFFAG--NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLI 577 (631)
T ss_dssp TTEEEEEET--TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETTEEEEEETTTTEECTTCCEET
T ss_pred CCEEEEEec--CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECCEEEEEcCCcccccCCCCcch
Confidence 688999966 46888875311 01 11111 111 122333 268999999999999997543222221211
Q ss_pred -------cccccEEEEEEC--CeEEEEeC
Q 021080 248 -------RRRIGFAMIGMG--DDIYVIGG 267 (317)
Q Consensus 248 -------~~r~~~~~~~~~--~~lyv~GG 267 (317)
.... -++.... +++|++-|
T Consensus 578 ~~~w~G~p~~i-DAAf~~~~~g~~YFFkG 605 (631)
T 1ck7_A 578 ADAWNAIPDNL-DAVVDLQGGGHSYFFKG 605 (631)
T ss_dssp TTSCSSCCTTC-CEEECCTTSCBCEEEET
T ss_pred HhhcCCCCCCC-cEeEEEcCCCeEEEEEC
Confidence 1112 2333443 78999876
No 226
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=73.96 E-value=36 Score=28.06 Aligned_cols=109 Identities=11% Similarity=0.011 Sum_probs=49.7
Q ss_pred CEEEEEecCceeEEEEeCCCCc--EEeccCCccC-CcE--EEE--c---CeEEEEeC--cEEEEecCCc----eEEEecc
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLG--WTVEDYGWLQ-GPM--AIV--H---DSVYLMSH--GLIIKQHRDV----RKVVASA 244 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~--W~~~~~~~~~-~~~--~~~--~---~~ly~~g~--~~~~~yd~~~----W~~v~~~ 244 (317)
+++++.|+....+..||..+.. |.....+..+ ..+ +.. + +.+++.++ +.+..+|.+. |......
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~ 249 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLK 249 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESS
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeee
Confidence 4567777755667777775543 5433222211 111 111 1 24444443 5666666432 6532211
Q ss_pred ccccccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecccC
Q 021080 245 SEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSPM 302 (317)
Q Consensus 245 ~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~~ 302 (317)
.......-..+.. -++++++.||.++ .|.+|+...+ .+|+.+..+
T Consensus 250 ~~~~~~~v~~~~~s~~g~~las~~~D~------------~v~lw~~~~~-g~w~~~~~~ 295 (297)
T 2pm7_B 250 EEKFPDVLWRASWSLSGNVLALSGGDN------------KVTLWKENLE-GKWEPAGEV 295 (297)
T ss_dssp SSCCSSCEEEEEECSSSCCEEEEETTS------------CEEEEEECTT-SCEEEC---
T ss_pred cccCCCcEEEEEECCCCCEEEEEcCCC------------cEEEEEECCC-CcEEecccc
Confidence 0001111112222 2567777776432 4567776632 289887654
No 227
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.82 E-value=21 Score=30.13 Aligned_cols=57 Identities=14% Similarity=-0.024 Sum_probs=35.1
Q ss_pred CCEEEEEecC----------ceeEEEEeCCCCcEEeccCCc----c-CCcEEEEcCeEEEEeC--cEEEEecCC
Q 021080 180 GGKVHVLHKG----------LSTVQVLDHMGLGWTVEDYGW----L-QGPMAIVHDSVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 180 ~g~lyv~gG~----------~~~v~~yd~~~~~W~~~~~~~----~-~~~~~~~~~~ly~~g~--~~~~~yd~~ 236 (317)
+|.||+.... ...+.+||+....-..+.... . ...++.-+++||+.+. +.+..|+++
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 5789987542 356899999765554443221 1 2233445789998853 677777654
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=73.58 E-value=61 Score=30.82 Aligned_cols=136 Identities=5% Similarity=-0.080 Sum_probs=73.5
Q ss_pred ceeEEeeCCCC--ceeeCCCCCccCCCceEEEEECCEEEEEec---CceeEEEEeCCCC---cEEeccCCcc-CCcEEEE
Q 021080 148 SQAEMYDPEKD--VWVPIPDLHRTHNSACTGVVIGGKVHVLHK---GLSTVQVLDHMGL---GWTVEDYGWL-QGPMAIV 218 (317)
Q Consensus 148 ~~~~~yd~~t~--~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG---~~~~v~~yd~~~~---~W~~~~~~~~-~~~~~~~ 218 (317)
++++.+|..+. +|+.+..-... ... .....+++||+... ....+...|+.+. .|+.+.+... .......
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~-~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~ 336 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDA-DVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSG 336 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSS-CEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCc-eEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEE
Confidence 57788887665 67766433222 211 13356789999876 3467999998764 4876543322 1233334
Q ss_pred cCeEEEEeC----cEEEEecCCc-eEEEeccccccccccEEEEE---ECCeEEEE-eCcccCCCCceecccCcceeEeec
Q 021080 219 HDSVYLMSH----GLIIKQHRDV-RKVVASASEFRRRIGFAMIG---MGDDIYVI-GGVIGPDRWNWDIKPMSDVDVLTV 289 (317)
Q Consensus 219 ~~~ly~~g~----~~~~~yd~~~-W~~v~~~~~~~~r~~~~~~~---~~~~lyv~-GG~~~~~~~~~~~~~~~~v~~yd~ 289 (317)
++.|++... ..++.++.+. +...-.+|. ... ..... -++.|++. .+.. .-..++.||+
T Consensus 337 g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~--~~~-~~~~~~~~d~~~l~~~~ss~~----------tP~~l~~~d~ 403 (693)
T 3iuj_A 337 SGYLFAEYMVDATARVEQFDYEGKRVREVALPG--LGS-VSGFNGKHDDPALYFGFENYA----------QPPTLYRFEP 403 (693)
T ss_dssp TTEEEEEEEETTEEEEEEECTTSCEEEEECCSS--SSE-EEECCCCTTCSCEEEEEECSS----------SCCEEEEECT
T ss_pred CCEEEEEEEECCeeEEEEEECCCCeeEEeecCC--Cce-EEeeecCCCCCEEEEEecCCC----------CCCEEEEEEC
Confidence 556655432 4688888765 433323332 111 11111 12345443 2222 2247888998
Q ss_pred CCCCCceeecc
Q 021080 290 GAERPTWRQVS 300 (317)
Q Consensus 290 ~~~~~~W~~~~ 300 (317)
+++ +.+.+.
T Consensus 404 ~~g--~~~~l~ 412 (693)
T 3iuj_A 404 KSG--AISLYR 412 (693)
T ss_dssp TTC--CEEEEE
T ss_pred CCC--eEEEEE
Confidence 887 776664
No 229
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=73.58 E-value=42 Score=28.57 Aligned_cols=84 Identities=14% Similarity=0.140 Sum_probs=50.8
Q ss_pred CCEEEEEe-cCceeEEEEeCCCCcEEec-cCCc-cCCcEEEE--cCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLH-KGLSTVQVLDHMGLGWTVE-DYGW-LQGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~g-G~~~~v~~yd~~~~~W~~~-~~~~-~~~~~~~~--~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
+|.||+.- |....|+++++....=+.+ .... .+..++.- +++||+.+. +.|+.++.+. -+.+..- ...
T Consensus 133 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~---~~~ 209 (318)
T 3sov_A 133 SGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG---SLP 209 (318)
T ss_dssp GTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---CCS
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecC---CCC
Confidence 58999986 3457899999864432222 2211 12334443 689999986 7888888764 3333221 112
Q ss_pred ccEEEEEECCeEEEEe
Q 021080 251 IGFAMIGMGDDIYVIG 266 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~G 266 (317)
.-.+++..++.||+.-
T Consensus 210 ~P~glav~~~~lywtd 225 (318)
T 3sov_A 210 HPFALTLFEDILYWTD 225 (318)
T ss_dssp CEEEEEEETTEEEEEE
T ss_pred CceEEEEeCCEEEEEe
Confidence 3356677788888873
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=72.87 E-value=50 Score=29.16 Aligned_cols=57 Identities=12% Similarity=0.048 Sum_probs=38.1
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEec----cCCcc---CC-cEEEE--cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVE----DYGWL---QG-PMAIV--HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~----~~~~~---~~-~~~~~--~~~ly~~g~--~~~~~yd~~~ 237 (317)
+|.||+... ...+.+||+.+..-..+ ..... +. .++.. ++.||+.+. +.++.++.+.
T Consensus 230 ~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 230 EEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp SSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 689999543 56799999988765544 11111 12 34443 578999975 7899998765
No 231
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=72.43 E-value=67 Score=30.42 Aligned_cols=84 Identities=15% Similarity=0.060 Sum_probs=51.9
Q ss_pred CCEEEEEe-cCceeEEEEeCCCCcEEeccCCcc-CCcEEEE--cCeEEEEeC--cEEEEecCCc-eEEEecccccccccc
Q 021080 180 GGKVHVLH-KGLSTVQVLDHMGLGWTVEDYGWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV-RKVVASASEFRRRIG 252 (317)
Q Consensus 180 ~g~lyv~g-G~~~~v~~yd~~~~~W~~~~~~~~-~~~~~~~--~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~~~r~~ 252 (317)
+|.||+.- |....|++.++....-+.+-.... +..++.- +++||+.+. +.+..++.+. -.++-. . .....
T Consensus 134 ~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~--~-~l~~P 210 (628)
T 4a0p_A 134 EGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA--D-DLPHP 210 (628)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--E-CCSCE
T ss_pred CCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee--c-cCCCc
Confidence 68999986 445689999887655443322222 2233332 589999986 6888888765 222211 1 12233
Q ss_pred EEEEEECCeEEEEe
Q 021080 253 FAMIGMGDDIYVIG 266 (317)
Q Consensus 253 ~~~~~~~~~lyv~G 266 (317)
++++..+++||+.-
T Consensus 211 ~glav~~~~ly~tD 224 (628)
T 4a0p_A 211 FGLTQYQDYIYWTD 224 (628)
T ss_dssp EEEEEETTEEEEEE
T ss_pred eEEEEECCEEEEec
Confidence 57777889999885
No 232
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=72.39 E-value=44 Score=28.31 Aligned_cols=52 Identities=4% Similarity=-0.070 Sum_probs=25.5
Q ss_pred CceEEEEEeC--CCCce--EEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEc
Q 021080 55 ENLLCVCAFD--PENLW--QLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLG 108 (317)
Q Consensus 55 ~~~l~v~gg~--~~~~~--~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~G 108 (317)
+..||+.... ....+ +.+|..+++...+...+.. ......++.-++.||+..
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~--~~~p~~~~~dg~~l~~~~ 116 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM--GADPCYLTTNGKNIVTAN 116 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS--SSCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC--CCCcEEEEECCCEEEEEE
Confidence 5567777653 22455 4455555676665443321 112233333344566655
No 233
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=71.86 E-value=51 Score=28.86 Aligned_cols=57 Identities=4% Similarity=-0.224 Sum_probs=38.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-----cc----CCccCCcEEE-E-cCeEEEEeCcEEEEecCCce
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-----ED----YGWLQGPMAI-V-HDSVYLMSHGLIIKQHRDVR 238 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-----~~----~~~~~~~~~~-~-~~~ly~~g~~~~~~yd~~~W 238 (317)
++++|++-| +..++||..+++-.. +. ..+....+|. . ++++|++.|+..+.||..+-
T Consensus 284 ~~~~yfFkG--~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg~~ywr~d~~~~ 351 (365)
T 3ba0_A 284 FYRTYFFVD--NQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQFEYDFLLQ 351 (365)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEETTEEEEEETTTT
T ss_pred CCEEEEEEC--CEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeCCEEEEEECCcc
Confidence 589999966 578999987654221 10 1111233443 3 78999999999999998763
No 234
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=71.36 E-value=39 Score=27.23 Aligned_cols=102 Identities=9% Similarity=-0.018 Sum_probs=57.5
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCCc-E--EeccCCcc----CCcEEEE---cCeEEEEeCcEEEEecCCc----e-E
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGLG-W--TVEDYGWL----QGPMAIV---HDSVYLMSHGLIIKQHRDV----R-K 239 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~~-W--~~~~~~~~----~~~~~~~---~~~ly~~g~~~~~~yd~~~----W-~ 239 (317)
+++..+|++|++-| ...++++..... . ..+...++ ...+|.. ++++|++-|+..|.|+..+ . +
T Consensus 35 Ai~~~~g~~~fFkg--~~~Wr~~~~~~~~~~P~~I~~~wp~lp~~IDAA~~~~~~~k~yfFkG~~yW~y~~~~~~~gyPk 112 (218)
T 1gen_A 35 GIAQIRGEIFFFKD--RFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPK 112 (218)
T ss_dssp EEEEETTEEEEEET--TEEEEESSTTSCCEEEEEGGGTCTTSCSCCSEEEEETTTTEEEEEETTEEEEEETTEECTTCSE
T ss_pred EEEeCCCcEEEEEC--CEEEEEeCCCCccCCCEEHHHhcCCCCCCccEEEEECCCCEEEEEeCCEEEEEcCccccCCCCc
Confidence 34557999999976 345665544321 1 12222221 3344433 5899999999999998643 1 1
Q ss_pred EEec--cccccccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 240 VVAS--ASEFRRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 240 ~v~~--~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+.. +|....+..+++.. .++++|++-| +..|.||..++
T Consensus 113 ~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------------~~ywr~d~~~~ 154 (218)
T 1gen_A 113 PLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------------DKFWRYNEVKK 154 (218)
T ss_dssp EGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------------TEEEEEETTTT
T ss_pred cHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------------CEEEEEECccc
Confidence 2222 22111233344432 3689999976 25677887654
No 235
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=70.59 E-value=47 Score=27.91 Aligned_cols=107 Identities=8% Similarity=-0.033 Sum_probs=53.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccC-CcE--EEE--c--CeEEEEeC--cEEEEecCC------c--eEEEe
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQ-GPM--AIV--H--DSVYLMSH--GLIIKQHRD------V--RKVVA 242 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~-~~~--~~~--~--~~ly~~g~--~~~~~yd~~------~--W~~v~ 242 (317)
++.+++.|+....+..+|..++.|..+..+..+ ..+ +.. + +...+.++ +.+..+|.. + |..+.
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 566777777666788888877766554332221 111 111 1 22333332 455555431 1 66655
Q ss_pred ccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeecc
Q 021080 243 SASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVS 300 (317)
Q Consensus 243 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~ 300 (317)
.++......-..++...+.+++.||.+ ..|.+||..++ +|+.+.
T Consensus 244 ~~~~~h~~~v~~v~~s~~~~l~s~~~d------------g~v~iw~~~~~--~~~~~~ 287 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGFNGLIASVGAD------------GVLAVYEEVDG--EWKVFA 287 (330)
T ss_dssp ECCSCCSSCEEEEEECTTSCEEEEETT------------SCEEEEEEETT--EEEEEE
T ss_pred ecccccccceEEEEEcCCCEEEEEeCC------------CEEEEEEcCCC--ceEEEe
Confidence 544211122222333344555666532 25778888887 786553
No 236
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=70.38 E-value=57 Score=28.77 Aligned_cols=111 Identities=9% Similarity=-0.050 Sum_probs=59.0
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEe-ccCC-----------------------ccCCcEEE---E--cCeEEEEe--Cc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTV-EDYG-----------------------WLQGPMAI---V--HDSVYLMS--HG 228 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~-~~~~-----------------------~~~~~~~~---~--~~~ly~~g--~~ 228 (317)
++++++.|+....+..||..+.+-.. +... .....+.. . +..+++.. .+
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~ 330 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATK 330 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCC
Confidence 78888888867789999998876322 1100 00011111 1 33455554 36
Q ss_pred EEEEecC--Cc---eEEEeccccccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCcee
Q 021080 229 LIIKQHR--DV---RKVVASASEFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWR 297 (317)
Q Consensus 229 ~~~~yd~--~~---W~~v~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~ 297 (317)
.+..|+. .. ++.+..++. ...-..++...+.+++..+........ ...-.++.++.+++ +|+
T Consensus 331 ~i~iw~~~~~~~~~l~~~~~~~~--~~~v~~~~~~~~~~~v~~~~~~~~~~~---~~~i~v~~~~~~~~--~~~ 397 (450)
T 2vdu_B 331 CIIILEMSEKQKGDLALKQIITF--PYNVISLSAHNDEFQVTLDNKESSGVQ---KNFAKFIEYNLNEN--SFV 397 (450)
T ss_dssp EEEEEEECSSSTTCEEEEEEEEC--SSCEEEEEEETTEEEEEECCTTCCSSC---CCSEEEEEEETTTT--EEE
T ss_pred eEEEEEeccCCCCceeeccEecc--CCceEEEEecCCcEEEEEecccCCCCC---CcceEEEEEEcCCC--eEE
Confidence 7888877 32 566665552 222234455567777776644321000 11225666677777 774
No 237
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=70.36 E-value=46 Score=27.73 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=50.7
Q ss_pred EECCEEEEEecCceeEEEEeCCC-CcE---EeccCCccCCcEEE-EcCeEEEEe--CcEEEEecCCc-eEEEeccccccc
Q 021080 178 VIGGKVHVLHKGLSTVQVLDHMG-LGW---TVEDYGWLQGPMAI-VHDSVYLMS--HGLIIKQHRDV-RKVVASASEFRR 249 (317)
Q Consensus 178 ~~~g~lyv~gG~~~~v~~yd~~~-~~W---~~~~~~~~~~~~~~-~~~~ly~~g--~~~~~~yd~~~-W~~v~~~~~~~~ 249 (317)
..++.||+.--....|.+||+.. .+. +.+.....+..+++ -+|++|+.. .+.+..|+++. -..+...+. .
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~--~ 253 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQ--G 253 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGG--T
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeeccc--c
Confidence 34568999876567899999865 221 11111111233443 267899987 47899999875 544444442 1
Q ss_pred cccEEEEEE------CCeEEEEeC
Q 021080 250 RIGFAMIGM------GDDIYVIGG 267 (317)
Q Consensus 250 r~~~~~~~~------~~~lyv~GG 267 (317)
-.....+.+ ++.|||...
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cCCceEEEEecccCCCCEEEEECC
Confidence 112233333 268998865
No 238
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=69.88 E-value=51 Score=28.04 Aligned_cols=33 Identities=15% Similarity=-0.056 Sum_probs=21.3
Q ss_pred CceEEEEEe-CCCCceEEEeCCCCCEeecCCCCc
Q 021080 55 ENLLCVCAF-DPENLWQLYDPLRDLWITLPVLPS 87 (317)
Q Consensus 55 ~~~l~v~gg-~~~~~~~~yd~~~~~W~~~~~~p~ 87 (317)
+..|+.... +....++.+|..+++-..+...+.
T Consensus 47 g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~ 80 (388)
T 3pe7_A 47 GSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRG 80 (388)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTCEEEECCCSSC
T ss_pred CCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCC
Confidence 334444443 234579999999988888765543
No 239
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=69.30 E-value=30 Score=30.90 Aligned_cols=137 Identities=10% Similarity=-0.020 Sum_probs=71.8
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeE
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
++.||+.-.. ..+..+|+..+....+.... .....++.. ++.||+....... ..
T Consensus 149 ~g~Lyv~d~~--~~I~~id~~~~~v~~~~~~~-----~~P~~ia~d~~G~~lyvad~~~~~------------~~----- 204 (430)
T 3tc9_A 149 HNHLYLVGEQ--HPTRLIDFEKEYVSTVYSGL-----SKVRTICWTHEADSMIITNDQNNN------------DR----- 204 (430)
T ss_dssp EEEEEEEEBT--EEEEEEETTTTEEEEEECCC-----SCEEEEEECTTSSEEEEEECCSCT------------TS-----
T ss_pred CCeEEEEeCC--CcEEEEECCCCEEEEEecCC-----CCcceEEEeCCCCEEEEEeCCCCc------------cc-----
Confidence 3567766543 68889999988877664421 111333332 3459998753221 01
Q ss_pred ecccCCCCCCCcCCCceeEEeeCCCCcee---eCCCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEecc
Q 021080 133 YDPVTRGFTSCRKSISQAEMYDPEKDVWV---PIPDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVED 207 (317)
Q Consensus 133 ~d~~~~G~~~~~~~~~~~~~yd~~t~~W~---~~~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~ 207 (317)
..+..++.. ..|. .++.+..+ +..++. +|.||+.--....|++||+.+..-..+.
T Consensus 205 ---------------~~v~~~~~~-g~~~~~~~l~~~~~p----~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~ 264 (430)
T 3tc9_A 205 ---------------PNNYILTRE-SGFKVITELTKGQNC----NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF 264 (430)
T ss_dssp ---------------EEEEEEEGG-GTSCSEEEEEECSSC----CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ---------------ceEEEEeCC-CceeeeeeeccCCCc----eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 122223321 1221 22233333 223333 6889998655678999999877542222
Q ss_pred CCc---cCCcEEEE-cCe-EEEEeC--cEEEEecC
Q 021080 208 YGW---LQGPMAIV-HDS-VYLMSH--GLIIKQHR 235 (317)
Q Consensus 208 ~~~---~~~~~~~~-~~~-ly~~g~--~~~~~yd~ 235 (317)
... .+..++.- +++ ||+.+. +.+++++.
T Consensus 265 ~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 265 TIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 111 11223332 444 999975 67877654
No 240
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=68.80 E-value=50 Score=27.51 Aligned_cols=85 Identities=9% Similarity=-0.041 Sum_probs=42.5
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEE----ECCEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEEcCeEE
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVV----IGGKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIVHDSVY 223 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~----~~g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~~~~ly 223 (317)
.+.+||..+.+-..+..- ......+. -++.+++.|+....+..||+.+.+-. .+.............+.++
T Consensus 109 ~v~iwd~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQH----DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV 184 (368)
T ss_dssp EEEEEETTTTEEEEEEEC----SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred cEEEEEcCCCCceeeccc----cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence 456677766654443221 11122222 36677777776778999998776421 1111101112222344444
Q ss_pred EEeC-cEEEEecCCc
Q 021080 224 LMSH-GLIIKQHRDV 237 (317)
Q Consensus 224 ~~g~-~~~~~yd~~~ 237 (317)
+... +.+..|+...
T Consensus 185 ~~~~~~~i~~~~~~~ 199 (368)
T 3mmy_A 185 VATAERGLIVYQLEN 199 (368)
T ss_dssp EEEGGGCEEEEECSS
T ss_pred EEeCCCcEEEEEecc
Confidence 4433 6677776654
No 241
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=68.35 E-value=71 Score=29.08 Aligned_cols=99 Identities=15% Similarity=0.142 Sum_probs=57.3
Q ss_pred CEEEEEecC-ceeEEEEeCCCCcEEe--ccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEeccccccccccE
Q 021080 181 GKVHVLHKG-LSTVQVLDHMGLGWTV--EDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGF 253 (317)
Q Consensus 181 g~lyv~gG~-~~~v~~yd~~~~~W~~--~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~ 253 (317)
++..+.|+. ...+..||..+..... ............. ++++.+.++ +.+..||.++.+.+..+.... ....
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h-~~~v 534 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFR-TSKI 534 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCC-SSCE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCC-CCce
Confidence 666666666 7789999998876632 2111111122222 566666654 689999988866665544211 1111
Q ss_pred EEEEE------------CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 254 AMIGM------------GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 254 ~~~~~------------~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..+.+ ++++++.|+.+ ..|.+||+++.
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~d------------g~i~iw~~~~~ 573 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLD------------TNIFIYSVKRP 573 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETT------------SCEEEEESSCT
T ss_pred eEEEEcCccccccccccCCCEEEEEcCC------------CcEEEEECCCC
Confidence 22222 56777777643 26788999875
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=68.12 E-value=16 Score=30.59 Aligned_cols=85 Identities=6% Similarity=-0.083 Sum_probs=50.6
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CC-EEEEEecC-----ceeEEEEeCCCCcEEecc---CCcc--CCc
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GG-KVHVLHKG-----LSTVQVLDHMGLGWTVED---YGWL--QGP 214 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g-~lyv~gG~-----~~~v~~yd~~~~~W~~~~---~~~~--~~~ 214 (317)
..+++||+.+++.+.+. ... ......+ ++ .||+.... ...+.+||...+...... .... +..
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DLD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred CeEEEEcCCCCcEEEEe--cCC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 57889999888877654 222 2222222 44 58887543 267999998765422111 1101 122
Q ss_pred EEE-EcCeEEEEeCcEEEEecCCc
Q 021080 215 MAI-VHDSVYLMSHGLIIKQHRDV 237 (317)
Q Consensus 215 ~~~-~~~~ly~~g~~~~~~yd~~~ 237 (317)
++. -+|.||+...+.++.|+++.
T Consensus 244 i~~d~~G~lwv~~~~gv~~~~~~g 267 (305)
T 3dr2_A 244 FCVDRGGWLWSSSGTGVCVFDSDG 267 (305)
T ss_dssp EEECTTSCEEECCSSEEEEECTTS
T ss_pred EEECCCCCEEEecCCcEEEECCCC
Confidence 332 36789988878899999865
No 243
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=67.79 E-value=51 Score=27.27 Aligned_cols=51 Identities=10% Similarity=0.072 Sum_probs=26.5
Q ss_pred eeEEeeC-CCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCC
Q 021080 149 QAEMYDP-EKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMG 200 (317)
Q Consensus 149 ~~~~yd~-~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~ 200 (317)
.+.+||. .+++-..+...+.. ..-.......+.+++.++....+..||+.+
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEAN-LGICRICKYGDDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCC-SCEEEEEEETTTEEEEEETTSEEEEECHHH
T ss_pred eEEEEEeccCCceEeccccCCC-CceEEEEeCCCCEEEEEcCCCeEEEEcccc
Confidence 4556666 66655544431111 111223333355566666567788888764
No 244
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=65.48 E-value=57 Score=26.92 Aligned_cols=97 Identities=10% Similarity=-0.022 Sum_probs=50.5
Q ss_pred EEEEEecCceeEEEEeCCCCcEEeccCC-ccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEeccccccccccEEEE
Q 021080 182 KVHVLHKGLSTVQVLDHMGLGWTVEDYG-WLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMI 256 (317)
Q Consensus 182 ~lyv~gG~~~~v~~yd~~~~~W~~~~~~-~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~ 256 (317)
.+++.++....+..||..+..-...-.. ......+.+ ++++++.++ +.+..||..+.+.+..+.. ...-..+.
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~ 263 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINALC 263 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--SSCEEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC--CceEEeee
Confidence 4556666566788899887764322111 111111222 455555554 6888899888666554442 11112223
Q ss_pred EECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 257 GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 257 ~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...+..++.++.+ ..|.+||.++.
T Consensus 264 ~~~~~~~~~~~~d------------~~i~iwd~~~~ 287 (340)
T 4aow_A 264 FSPNRYWLCAATG------------PSIKIWDLEGK 287 (340)
T ss_dssp ECSSSSEEEEEET------------TEEEEEETTTT
T ss_pred cCCCCceeeccCC------------CEEEEEECCCC
Confidence 3334444455422 25667777665
No 245
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=64.71 E-value=71 Score=27.77 Aligned_cols=61 Identities=13% Similarity=0.030 Sum_probs=38.3
Q ss_pred cCeEEEEe-----------CcEEEEecCCceEEEeccccccccccEEEE-EECCe-EEEEeCcccCCCCceecccCccee
Q 021080 219 HDSVYLMS-----------HGLIIKQHRDVRKVVASASEFRRRIGFAMI-GMGDD-IYVIGGVIGPDRWNWDIKPMSDVD 285 (317)
Q Consensus 219 ~~~ly~~g-----------~~~~~~yd~~~W~~v~~~~~~~~r~~~~~~-~~~~~-lyv~GG~~~~~~~~~~~~~~~~v~ 285 (317)
++++|+.. ++.++.+|.++.+.+..++. .....++. .-+++ +++..... .++|.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~-----------~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAG-----------TEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCC-----------CCeEE
Confidence 47899864 25799999999888887763 32223333 33444 44433211 24889
Q ss_pred EeecCCC
Q 021080 286 VLTVGAE 292 (317)
Q Consensus 286 ~yd~~~~ 292 (317)
+||.++.
T Consensus 345 ViD~~t~ 351 (373)
T 2mad_H 345 IYDAGAG 351 (373)
T ss_pred EEECCCC
Confidence 9999866
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=64.69 E-value=59 Score=26.87 Aligned_cols=24 Identities=13% Similarity=-0.128 Sum_probs=15.7
Q ss_pred EEEECCEEEEEecCceeEEEEeCCC
Q 021080 176 GVVIGGKVHVLHKGLSTVQVLDHMG 200 (317)
Q Consensus 176 ~~~~~g~lyv~gG~~~~v~~yd~~~ 200 (317)
.....+. +++|+....+..||..+
T Consensus 156 ~~~~~~~-l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 156 MDTNSSR-LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp EEECSSE-EEEEESTTEEEEEESSC
T ss_pred EEecCCc-EEEEeCCCeEEEEECCc
Confidence 3344455 55555566899999987
No 247
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=64.44 E-value=63 Score=27.12 Aligned_cols=22 Identities=23% Similarity=-0.011 Sum_probs=15.7
Q ss_pred CCEEEEEecCceeEEEEeCCCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG 202 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~ 202 (317)
+++..+.|+ .+.+..||+.+..
T Consensus 225 ~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 225 NGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp TSSEEEEEE-SSBEEEEETTSST
T ss_pred CCCEEEEEe-CCeEEEEEcCCCC
Confidence 566666666 3489999998764
No 248
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=64.19 E-value=67 Score=27.28 Aligned_cols=59 Identities=8% Similarity=-0.054 Sum_probs=29.5
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCE-EEEEec--C--ceeEEEEeCCCCcEEec
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGK-VHVLHK--G--LSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~-lyv~gG--~--~~~v~~yd~~~~~W~~~ 206 (317)
..++.+|..+...+.+..-.......+-+..-+|+ |+.... . ...++.+|+.+++-+.+
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 216 ARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp CSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred ceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 46667777666655554432110011111122554 544332 1 22499999988875554
No 249
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=63.67 E-value=15 Score=31.99 Aligned_cols=58 Identities=14% Similarity=0.164 Sum_probs=34.4
Q ss_pred ECCEEEEEecCceeEEEEeCCCCc--EEeccC--Ccc---CCcEEEEcCeEEEEe---CcEEEEecCCc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLG--WTVEDY--GWL---QGPMAIVHDSVYLMS---HGLIIKQHRDV 237 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~--W~~~~~--~~~---~~~~~~~~~~ly~~g---~~~~~~yd~~~ 237 (317)
.++.+|+... ...++++|..+++ |+.... .+. ..+....++.+|++. .+.++.++.++
T Consensus 9 ~~~~V~v~t~-dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 9 LSDILIAADV-EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEEEET-TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT
T ss_pred eCCEEEEEeC-CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC
Confidence 3455555543 5678999987774 986543 111 111111255777764 48999999776
No 250
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=62.93 E-value=76 Score=27.53 Aligned_cols=88 Identities=13% Similarity=0.007 Sum_probs=44.9
Q ss_pred ceeEEeeCCCCceeeC-CCCCccCCCceEEEEE--CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE------
Q 021080 148 SQAEMYDPEKDVWVPI-PDLHRTHNSACTGVVI--GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV------ 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~-~~~p~~~r~~~~~~~~--~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~------ 218 (317)
..+.+||..+.+-... ...+.. .....+.+ ++++.+.|+....+..||+.+.+-...-......++..+
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRH--GAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGG--CCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CeEEEEeCCCCeeeEEEccCCCC--CceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 4566777766543221 111111 12222323 677777777667799999988764321110111122222
Q ss_pred --cCeEEEEeC--cEEEEecCCc
Q 021080 219 --HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 219 --~~~ly~~g~--~~~~~yd~~~ 237 (317)
++.+.+.++ +.+..||..+
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTT
T ss_pred CCCccEEEEEcCCCcEEEEEcCC
Confidence 233455554 5688888765
No 251
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.97 E-value=1.2e+02 Score=28.91 Aligned_cols=88 Identities=7% Similarity=0.008 Sum_probs=52.8
Q ss_pred CceeEEeeCCCC--c-eeeCCCCCccCCCceEEEEECCEEEEEec---CceeEEEEeCCC--CcEEeccCCcc--CCcEE
Q 021080 147 ISQAEMYDPEKD--V-WVPIPDLHRTHNSACTGVVIGGKVHVLHK---GLSTVQVLDHMG--LGWTVEDYGWL--QGPMA 216 (317)
Q Consensus 147 ~~~~~~yd~~t~--~-W~~~~~~p~~~r~~~~~~~~~g~lyv~gG---~~~~v~~yd~~~--~~W~~~~~~~~--~~~~~ 216 (317)
.++++++|..+. + |+.+..-... .... ....++.||+... ....++.+|..+ ..|..+-+... ...++
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKA-QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE
Confidence 457888888776 6 8777543333 2222 2246778888865 345799999987 57887643322 11223
Q ss_pred EEcCeEEEEeC----cEEEEecCC
Q 021080 217 IVHDSVYLMSH----GLIIKQHRD 236 (317)
Q Consensus 217 ~~~~~ly~~g~----~~~~~yd~~ 236 (317)
..++.+++... ..++.++.+
T Consensus 371 ~~~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 371 IAGNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp EEBTEEEEEEEETTEEEEEEEETT
T ss_pred EECCEEEEEEEECCEEEEEEEeCC
Confidence 34677766642 467777743
No 252
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=59.90 E-value=1e+02 Score=28.12 Aligned_cols=56 Identities=7% Similarity=-0.140 Sum_probs=33.2
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEec--CceeEEEEeCCCCcEEe
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHK--GLSTVQVLDHMGLGWTV 205 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG--~~~~v~~yd~~~~~W~~ 205 (317)
..++++|..+++++.+..-... . ..-+..-||+.++.+. ....++.+|+.+++...
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~-~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGS-F-SSASISPGMKVTAGLETAREARLVTVDPRDGSVED 232 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCE-E-EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEE
T ss_pred eEEEEEcCCCCCceEeecCCCc-c-ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEE
Confidence 4578888888888766433222 1 1112223665444443 23479999999888773
No 253
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=59.81 E-value=81 Score=27.83 Aligned_cols=101 Identities=13% Similarity=0.018 Sum_probs=58.1
Q ss_pred CCEEEEEecC----ceeEEEEeCCCCcE-EeccCCccCCcEEEE--cCeEEEEe-----------CcEEEEecCCceEEE
Q 021080 180 GGKVHVLHKG----LSTVQVLDHMGLGW-TVEDYGWLQGPMAIV--HDSVYLMS-----------HGLIIKQHRDVRKVV 241 (317)
Q Consensus 180 ~g~lyv~gG~----~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~--~~~ly~~g-----------~~~~~~yd~~~W~~v 241 (317)
++++||.-.. .+.+.++|+.+.+- ..++....++ ++.. +..+|+.. .+.+..+|+.+-+.+
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 3678888542 56899999988763 2333322233 3333 34688875 256899999885555
Q ss_pred ecccccc-c------c-ccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 242 ASASEFR-R------R-IGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 242 ~~~~~~~-~------r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..++.+. . + ...++..-+.++|+.... ..+.|.+.|..+.
T Consensus 123 ~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-----------~~~~VsVID~~t~ 170 (386)
T 3sjl_D 123 ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-----------PAPAVGVVDLEGK 170 (386)
T ss_dssp EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-----------SSCEEEEEETTTT
T ss_pred EEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-----------CCCeEEEEECCCC
Confidence 5443211 1 1 122223335578886421 1247788888876
No 254
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=56.09 E-value=1.3e+02 Score=28.18 Aligned_cols=97 Identities=10% Similarity=-0.028 Sum_probs=49.5
Q ss_pred EEEEEecCceeEEEEeCCCCcEEe-ccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEeccccccccccEEEE
Q 021080 182 KVHVLHKGLSTVQVLDHMGLGWTV-EDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASASEFRRRIGFAMI 256 (317)
Q Consensus 182 ~lyv~gG~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~r~~~~~~ 256 (317)
.+.+.|+....+..||+.+..-.. +.........+.. ++++++.++ +.+..+|..+-+.+..+.. ...-.+++
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~ 609 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA--NSVIHALC 609 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC--SSCEEEEE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC--CCcEEEEE
Confidence 355666666779999998765332 2111111111222 455555554 6788888877555544442 11222333
Q ss_pred EECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 257 GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 257 ~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...+..++.++.+ ..|.+||++++
T Consensus 610 ~sp~~~~l~~~~~------------~~i~iwd~~~~ 633 (694)
T 3dm0_A 610 FSPNRYWLCAATE------------HGIKIWDLESK 633 (694)
T ss_dssp ECSSSSEEEEEET------------TEEEEEETTTT
T ss_pred EcCCCcEEEEEcC------------CCEEEEECCCC
Confidence 3333333333321 24778888776
No 255
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=55.73 E-value=1e+02 Score=26.69 Aligned_cols=194 Identities=9% Similarity=0.050 Sum_probs=99.2
Q ss_pred CceEEEEEeCCCCceEEEeCCC--CCEeecCCCCccccccCCeeEEEe---CCEEEEEcCcCCCCCCCCCCCCCcccccc
Q 021080 55 ENLLCVCAFDPENLWQLYDPLR--DLWITLPVLPSKIRHLAHFGVVST---AGKLFVLGGGSDAVDPLTGDQDGSFATNE 129 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~--~~W~~~~~~p~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 129 (317)
+..||+... .-++.++... .+|..+.+.... ..-++++.. .+.||+.+....
T Consensus 22 ~g~l~vgt~---~Gl~~~~~~~~g~~W~~~~~~~~~---~~v~~i~~dp~~~~~l~~g~~~g~----------------- 78 (394)
T 3b7f_A 22 PVMLLVATI---KGAWFLASDPARRTWELRGPVFLG---HTIHHIVQDPREPERMLMAARTGH----------------- 78 (394)
T ss_dssp CCEEEEEET---TEEEEEEECTTSCSEEEEEEESTT---SEEEEEEECSSSTTCEEEEEEC-------------------
T ss_pred CCEEEEEec---CceEEEECCCCCCCceECCccCCC---CceEEEEECCCCCCeEEEEecCCC-----------------
Confidence 446776553 3477777654 689876421111 222344443 467887664210
Q ss_pred eeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCC---CCcc-CC----C--ceEEEEE-----CCEEEEEecCceeEE
Q 021080 130 VWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPD---LHRT-HN----S--ACTGVVI-----GGKVHVLHKGLSTVQ 194 (317)
Q Consensus 130 ~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~-~r----~--~~~~~~~-----~g~lyv~gG~~~~v~ 194 (317)
.-..+++.+-...+|+.+.. ++.. .+ . ...++.. ++.||+.+. ...++
T Consensus 79 ----------------~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~ggl~ 141 (394)
T 3b7f_A 79 ----------------LGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-PQGLF 141 (394)
T ss_dssp ----------------CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-TTEEE
T ss_pred ----------------CCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-CCcEE
Confidence 00235555556678988753 2211 01 0 1112333 577887643 34588
Q ss_pred EEeCCCCcEEeccCCc-----------------cCC--cEEEE----cCeEEEEe-CcEEEEecC-Cc-eEEEecccc--
Q 021080 195 VLDHMGLGWTVEDYGW-----------------LQG--PMAIV----HDSVYLMS-HGLIIKQHR-DV-RKVVASASE-- 246 (317)
Q Consensus 195 ~yd~~~~~W~~~~~~~-----------------~~~--~~~~~----~~~ly~~g-~~~~~~yd~-~~-W~~v~~~~~-- 246 (317)
+.+-...+|+.+.... ... ....+ .+.||+.. .+.++..+- .+ |+.+.....
T Consensus 142 ~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~ 221 (394)
T 3b7f_A 142 RSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAAN 221 (394)
T ss_dssp EESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCT
T ss_pred EEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCcccc
Confidence 8888888999875310 000 12223 35788775 355766643 33 998853211
Q ss_pred ----cc---ccccEEEEEEC---CeEEEEeCcccCCCCceecccCcceeEeecCCCCCceeeccc-CCC
Q 021080 247 ----FR---RRIGFAMIGMG---DDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWRQVSP-MTR 304 (317)
Q Consensus 247 ----~~---~r~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~~~~~-~p~ 304 (317)
.. ....+.++... +.||+-.. ..+++.+-... +|+.+.. +|.
T Consensus 222 ~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--------------~gl~~s~D~G~--tW~~~~~~l~~ 274 (394)
T 3b7f_A 222 FLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--------------CGIYRMDRREG--VWKRIGDAMPR 274 (394)
T ss_dssp TSSSSSSSSCBCEEEEEECSSSTTEEEEEET--------------TEEEEEETTTT--EEECGGGGSCT
T ss_pred ccCCCccccCcceeEEEECCCCCCEEEEEcC--------------CeEEEeCCCCC--cceECCCCCCC
Confidence 00 11223344332 56766321 14666666666 8988754 444
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=54.99 E-value=1.1e+02 Score=27.04 Aligned_cols=112 Identities=11% Similarity=0.100 Sum_probs=61.1
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CC-EEEEEec----CceeEEEEeCCCCcEE---eccCCccCCcEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GG-KVHVLHK----GLSTVQVLDHMGLGWT---VEDYGWLQGPMAI 217 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g-~lyv~gG----~~~~v~~yd~~~~~W~---~~~~~~~~~~~~~ 217 (317)
..+.++|+.+++.+.+.. . ......+.+ +| .||+... ....+..++... .|. .+.....+..+++
T Consensus 159 ~~I~~id~~~~~v~~~~~---~-~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~~l~~~~~p~giav 233 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS---G-LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVITELTKGQNCNGAET 233 (430)
T ss_dssp EEEEEEETTTTEEEEEEC---C-CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSEEEEEECSSCCCEEE
T ss_pred CcEEEEECCCCEEEEEec---C-CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeeeeeeccCCCceEEEE
Confidence 678899999988776633 1 122233333 34 4999864 123466666533 232 3332222445554
Q ss_pred E--cCeEEEEeC--cEEEEecCCc--eEEEeccccccccccEEEEEE-CC-eEEEEe
Q 021080 218 V--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRRIGFAMIGM-GD-DIYVIG 266 (317)
Q Consensus 218 ~--~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~-~~-~lyv~G 266 (317)
- ++.||+.+. +.+++|+++. -..+...+. ......++.. ++ .||+..
T Consensus 234 dp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~--~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 234 HPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD--SGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS--SSCCEEEEECTTSSEEEEEE
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC--CCcceeEEEcCCCCEEEEEE
Confidence 3 678999874 7899999875 223333331 1112233333 34 488874
No 257
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=54.73 E-value=1.1e+02 Score=26.90 Aligned_cols=98 Identities=10% Similarity=0.101 Sum_probs=57.3
Q ss_pred CCEEEEEecCceeEEEEeCCCCc------EEecc-----CCcc---CCcEEEE--cCeEEEEe-----------CcEEEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLG------WTVED-----YGWL---QGPMAIV--HDSVYLMS-----------HGLIIK 232 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~------W~~~~-----~~~~---~~~~~~~--~~~ly~~g-----------~~~~~~ 232 (317)
+|+++++.- ...++.+|..++. |+... ..+. ....+.- ++++|+.- ++.++.
T Consensus 237 dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 566544432 3457777775543 44111 1111 1233332 57899963 268999
Q ss_pred ecCCceEEEeccccccccccEEEE-EECC--eEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 233 QHRDVRKVVASASEFRRRIGFAMI-GMGD--DIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 233 yd~~~W~~v~~~~~~~~r~~~~~~-~~~~--~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+|.++++.+..++. .....++. .-++ +||+..+ ..++|.+||..+.
T Consensus 316 iD~~t~kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~------------~~~~VsViD~~t~ 364 (386)
T 3sjl_D 316 LDAKTGERLAKFEM--GHEIDSINVSQDEKPLLYALST------------GDKTLYIHDAESG 364 (386)
T ss_dssp EETTTCCEEEEEEE--EEEECEEEECSSSSCEEEEEET------------TTTEEEEEETTTC
T ss_pred EECCCCeEEEEEEC--CCCcceEEECCCCCeEEEEEcC------------CCCeEEEEECCCC
Confidence 99999988888873 22222333 3344 4676544 1347899999988
No 258
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=54.11 E-value=1.3e+02 Score=27.34 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=36.8
Q ss_pred EEECCEEEEEec------CceeEEEEeCCCCc----EEeccCCccCCcE-E--EE-cCeEEEEe----------------
Q 021080 177 VVIGGKVHVLHK------GLSTVQVLDHMGLG----WTVEDYGWLQGPM-A--IV-HDSVYLMS---------------- 226 (317)
Q Consensus 177 ~~~~g~lyv~gG------~~~~v~~yd~~~~~----W~~~~~~~~~~~~-~--~~-~~~ly~~g---------------- 226 (317)
+.-+| |||..- ....+..+|..+.+ |..-. .+...+. . .- ++.+|...
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~-~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR-GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC-TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC-CCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 33456 777432 34679999999775 43111 1111111 1 11 44555553
Q ss_pred ----CcEEEEecCCceEEEeccc
Q 021080 227 ----HGLIIKQHRDVRKVVASAS 245 (317)
Q Consensus 227 ----~~~~~~yd~~~W~~v~~~~ 245 (317)
++.|..||.++.+.++.++
T Consensus 223 ~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp HHHSCCEEEEEETTTTEEEEEEE
T ss_pred hhccCCEEEEEECCCCcEeeEEe
Confidence 4788999988766555554
No 259
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=53.88 E-value=1e+02 Score=26.28 Aligned_cols=133 Identities=8% Similarity=-0.021 Sum_probs=67.5
Q ss_pred ceeEEeeCCCCceeeC--CCCCccCCCceEEEEE---CCEEEEEecCceeEEEEeCCCC--cEEeccCCccCCcEEEE--
Q 021080 148 SQAEMYDPEKDVWVPI--PDLHRTHNSACTGVVI---GGKVHVLHKGLSTVQVLDHMGL--GWTVEDYGWLQGPMAIV-- 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~--~~~p~~~r~~~~~~~~---~g~lyv~gG~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~-- 218 (317)
..+.+||..+++-... ...+..+......+.+ ++.+++.|+....+..||+... .-..+.........+..
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p 259 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP 259 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec
Confidence 4678888888765432 2222221112222332 6778888887778999998632 22222211111122222
Q ss_pred cCeEEEEeC--cEEEEecCCceEEEeccccccc-------cccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeec
Q 021080 219 HDSVYLMSH--GLIIKQHRDVRKVVASASEFRR-------RIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTV 289 (317)
Q Consensus 219 ~~~ly~~g~--~~~~~yd~~~W~~v~~~~~~~~-------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~ 289 (317)
++..++.++ +.+..+|..+-+.+..+..... ........-++++++.|+.+ ..|.+||.
T Consensus 260 ~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d------------g~i~vwd~ 327 (380)
T 3iz6_a 260 DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN------------GDCYVWDT 327 (380)
T ss_dssp TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT------------SCEEEEET
T ss_pred CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC------------CCEEEEEC
Confidence 455666654 6788888776332221110000 01112223366777776532 26788888
Q ss_pred CCC
Q 021080 290 GAE 292 (317)
Q Consensus 290 ~~~ 292 (317)
.+.
T Consensus 328 ~~~ 330 (380)
T 3iz6_a 328 LLA 330 (380)
T ss_dssp TTC
T ss_pred CCC
Confidence 766
No 260
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=53.55 E-value=1e+02 Score=26.05 Aligned_cols=99 Identities=10% Similarity=-0.010 Sum_probs=56.6
Q ss_pred ECCEEEEEecCceeEEEEeCCCCcEEecc--CCccCCcEEEE--cCeEEEEeC---cEEEEecCCc-e-EEEeccccccc
Q 021080 179 IGGKVHVLHKGLSTVQVLDHMGLGWTVED--YGWLQGPMAIV--HDSVYLMSH---GLIIKQHRDV-R-KVVASASEFRR 249 (317)
Q Consensus 179 ~~g~lyv~gG~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~--~~~ly~~g~---~~~~~yd~~~-W-~~v~~~~~~~~ 249 (317)
.++.||+.-.....|+++++....-..+. ....+..+++- ++.||..+. ..++.++.+. - +.+..-. .
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---l 165 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE---I 165 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS---C
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC---C
Confidence 37899999765678999998765433332 11112333432 589999873 6888888764 2 2221111 1
Q ss_pred cccEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 250 RIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 250 r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
....+++.- +++||+.-. ....|+++|++..
T Consensus 166 ~~Pnglavd~~~~~lY~aD~------------~~~~I~~~d~dG~ 198 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADA------------KLNFIHKSNLDGT 198 (318)
T ss_dssp SCEEEEEEETTTTEEEEEET------------TTTEEEEEETTSC
T ss_pred CCccEEEEeccCCEEEEEEC------------CCCEEEEEcCCCC
Confidence 122344443 678988743 1235667776543
No 261
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=53.21 E-value=1.5e+02 Score=27.97 Aligned_cols=110 Identities=10% Similarity=-0.065 Sum_probs=60.2
Q ss_pred CceEEEEEeCC---CCceEEEeCCC------C--CEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCC
Q 021080 55 ENLLCVCAFDP---ENLWQLYDPLR------D--LWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDG 123 (317)
Q Consensus 55 ~~~l~v~gg~~---~~~~~~yd~~~------~--~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 123 (317)
+.+|++..... .++++.+|..+ . .+..+..-.. ........-++.||+.+....
T Consensus 244 g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~----~~~~~~s~dg~~l~~~s~~~~----------- 308 (710)
T 2xdw_A 244 GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE----GEYDYVTNEGTVFTFKTNRHS----------- 308 (710)
T ss_dssp SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS----SCEEEEEEETTEEEEEECTTC-----------
T ss_pred CCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC----cEEEEEeccCCEEEEEECCCC-----------
Confidence 44555554322 56888999875 4 5766643222 111223345778888875321
Q ss_pred cccccceeEecccCCCCCCCcCCCceeEEeeCCCC---ceeeCCCCCccCCCceEEEEE-CCEEEEEec--CceeEEEEe
Q 021080 124 SFATNEVWSYDPVTRGFTSCRKSISQAEMYDPEKD---VWVPIPDLHRTHNSACTGVVI-GGKVHVLHK--GLSTVQVLD 197 (317)
Q Consensus 124 ~~~~~~~~~~d~~~~G~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~~r~~~~~~~~-~g~lyv~gG--~~~~v~~yd 197 (317)
....++++|..+. .|+.+.+-... ......... ++++++... ....++.+|
T Consensus 309 ----------------------~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 309 ----------------------PNYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp ----------------------TTCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEEEETTEEEEEEEE
T ss_pred ----------------------CCCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEEEECCEEEEEEEE
Confidence 1245666776654 47776332221 112233445 778877765 445788899
Q ss_pred CCCCc
Q 021080 198 HMGLG 202 (317)
Q Consensus 198 ~~~~~ 202 (317)
+.+++
T Consensus 366 ~~~g~ 370 (710)
T 2xdw_A 366 LATGA 370 (710)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 85554
No 262
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.96 E-value=1e+02 Score=25.96 Aligned_cols=144 Identities=14% Similarity=0.042 Sum_probs=72.0
Q ss_pred CceeEEeeCCCCceeeCCCCCccCCCceEEEEE--CCE-EEEEec-Cc----eeEEEEeCCCCcEEeccCCccC--Cc-E
Q 021080 147 ISQAEMYDPEKDVWVPIPDLHRTHNSACTGVVI--GGK-VHVLHK-GL----STVQVLDHMGLGWTVEDYGWLQ--GP-M 215 (317)
Q Consensus 147 ~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~--~g~-lyv~gG-~~----~~v~~yd~~~~~W~~~~~~~~~--~~-~ 215 (317)
...++++|..+++...+..- . ......... +++ |++... .. ..++.+|+.+..+..+...... .. .
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~--~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD--T-AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE--S-SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred cceEEEEECCCCcEEeeccC--C-cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 45788899988877665421 2 212222232 344 555443 22 5799999988877666542110 11 1
Q ss_pred EE-EcCe-EEEEeC------cEEEEecCCc--eEEEeccccccccccEEEEEE-CCeEEEEeCcccC----CCCceeccc
Q 021080 216 AI-VHDS-VYLMSH------GLIIKQHRDV--RKVVASASEFRRRIGFAMIGM-GDDIYVIGGVIGP----DRWNWDIKP 280 (317)
Q Consensus 216 ~~-~~~~-ly~~g~------~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~----~~~~~~~~~ 280 (317)
+. -+++ |+.... +.++.+|.+. .+.+...+. .. ....- +++++++.+.... .........
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 11 1444 444421 3489998765 555544441 11 22233 6676666442210 000000012
Q ss_pred CcceeEeecCCCCCceeecc
Q 021080 281 MSDVDVLTVGAERPTWRQVS 300 (317)
Q Consensus 281 ~~~v~~yd~~~~~~~W~~~~ 300 (317)
...++++|++++ +...+.
T Consensus 319 ~~~i~~~d~~~~--~~~~l~ 336 (396)
T 3c5m_A 319 DPFLYVLNTKAK--SAQKLC 336 (396)
T ss_dssp CCEEEEEETTTT--BCCEEE
T ss_pred CCcEEEEecccC--ceEEcc
Confidence 347899999887 555553
No 263
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=52.95 E-value=1.1e+02 Score=27.34 Aligned_cols=100 Identities=13% Similarity=0.004 Sum_probs=57.0
Q ss_pred CEEEEEecCc----eeEEEEeCCCCcEE-eccCCccCCcEEEE--cCeEEEEe-----------CcEEEEecCCceEEEe
Q 021080 181 GKVHVLHKGL----STVQVLDHMGLGWT-VEDYGWLQGPMAIV--HDSVYLMS-----------HGLIIKQHRDVRKVVA 242 (317)
Q Consensus 181 g~lyv~gG~~----~~v~~yd~~~~~W~-~~~~~~~~~~~~~~--~~~ly~~g-----------~~~~~~yd~~~W~~v~ 242 (317)
.++||.-... +.+.++|+.+.+=. .++....+ .++.. +..+|+.. ++.+..+|+.+-+.+.
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 5688876522 78999999888632 23322223 33332 45688874 3579999998854444
Q ss_pred ccccc-ccc-------ccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 243 SASEF-RRR-------IGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 243 ~~~~~-~~r-------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.++-+ ..| .+.++-.-+.++|+..-. ..+.|.++|+.+.
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----------~~~~VsVID~~t~ 210 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----------PAPAVGVVDLEGK 210 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----------SSCEEEEEETTTT
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecC-----------CCCeEEEEECCCC
Confidence 43311 011 122233335578886421 1247888999876
No 264
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=52.82 E-value=1.5e+02 Score=27.81 Aligned_cols=92 Identities=7% Similarity=-0.070 Sum_probs=44.9
Q ss_pred ceeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEE-cCeEEEE
Q 021080 148 SQAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIV-HDSVYLM 225 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~-~~~ly~~ 225 (317)
..+.+||..+.+-...-.-+.. ...+.+..-++++.+.|+....+..||..+.+-... .....-..++.. ++.+.+.
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHTG-YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCA 619 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEE
Confidence 4577788776653322111111 111112223677888887667899999987753211 111000111112 2333333
Q ss_pred e-CcEEEEecCCceEE
Q 021080 226 S-HGLIIKQHRDVRKV 240 (317)
Q Consensus 226 g-~~~~~~yd~~~W~~ 240 (317)
+ .+.+..||.++.+.
T Consensus 620 ~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 620 ATEHGIKIWDLESKSI 635 (694)
T ss_dssp EETTEEEEEETTTTEE
T ss_pred EcCCCEEEEECCCCCC
Confidence 2 36688888776433
No 265
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=52.77 E-value=1.9e+02 Score=28.91 Aligned_cols=58 Identities=10% Similarity=-0.036 Sum_probs=31.2
Q ss_pred eeEEeeCCCCceeeCCCCCccCCCceEEEEECCEEEEEecC----------ceeEEEEeCCCCcEEecc
Q 021080 149 QAEMYDPEKDVWVPIPDLHRTHNSACTGVVIGGKVHVLHKG----------LSTVQVLDHMGLGWTVED 207 (317)
Q Consensus 149 ~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~----------~~~v~~yd~~~~~W~~~~ 207 (317)
.+.++|..+++-..+..-+.. .....+..-+|+..++++. ...+..+|..+.....+.
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~-~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREA-MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSS-CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred eEEEEECCCCceEEeccCCCC-CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 566777777665544321222 1122223336665454431 257899999887755554
No 266
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=52.74 E-value=1.1e+02 Score=26.13 Aligned_cols=101 Identities=4% Similarity=-0.070 Sum_probs=54.0
Q ss_pred EECCEEEEEec----CceeEEEEeCCCCcEEeccCCc--c-CCcEE--EE--cCeEEEEeC--cEEEEecCCceEEEecc
Q 021080 178 VIGGKVHVLHK----GLSTVQVLDHMGLGWTVEDYGW--L-QGPMA--IV--HDSVYLMSH--GLIIKQHRDVRKVVASA 244 (317)
Q Consensus 178 ~~~g~lyv~gG----~~~~v~~yd~~~~~W~~~~~~~--~-~~~~~--~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~ 244 (317)
.-+++..+.++ ....+..+|............. . ..++. .+ ++++.+.++ +.+..||.++.+.+...
T Consensus 228 spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 228 IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 45788777765 1235666777666554322110 1 11121 11 566666664 67999998886665543
Q ss_pred cccccccc-EEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 245 SEFRRRIG-FAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 245 ~~~~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.. .+.. -..+.+ ++++++.|+.+ ..|.+||+..+
T Consensus 308 ~~--gH~~~V~~v~fSpdg~~laS~S~D------------~tvrvw~ip~~ 344 (365)
T 4h5i_A 308 KQ--AHSFAITEVTISPDSTYVASVSAA------------NTIHIIKLPLN 344 (365)
T ss_dssp TT--SSSSCEEEEEECTTSCEEEEEETT------------SEEEEEECCTT
T ss_pred cC--cccCCEEEEEECCCCCEEEEEeCC------------CeEEEEEcCCC
Confidence 31 1111 122233 67777776643 25777887543
No 267
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=51.97 E-value=1.1e+02 Score=25.85 Aligned_cols=107 Identities=11% Similarity=0.154 Sum_probs=53.6
Q ss_pred CCceeeCCCCCccCCCceEEEE-ECCEEEEEecCceeEEEEeCC-CCcEEeccCC--ccCCc--EEEE--cCeEEEEeC-
Q 021080 157 KDVWVPIPDLHRTHNSACTGVV-IGGKVHVLHKGLSTVQVLDHM-GLGWTVEDYG--WLQGP--MAIV--HDSVYLMSH- 227 (317)
Q Consensus 157 t~~W~~~~~~p~~~r~~~~~~~-~~g~lyv~gG~~~~v~~yd~~-~~~W~~~~~~--~~~~~--~~~~--~~~ly~~g~- 227 (317)
-.+|+.+... .+ ......++ -++.+|+.+.. ..+...+.. ..+|+.+... ..... .... ++.+|+++.
T Consensus 193 G~tW~~~~~~-~~-~~~~~~~~~~~g~~~~~~~~-G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 193 QTAWEPHNRT-TS-RRLHNMGFTPDGRLWMIVNG-GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp CSSCEEEECC-SS-SCEEEEEECTTSCEEEEETT-TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred CCceeECCCC-CC-CccceeEECCCCCEEEEeCC-ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 4689887432 23 22333332 36788887652 234444322 4579877543 11111 1122 578898876
Q ss_pred cEE-EEecCCc-eEEEeccccccccccEEEEE-ECCeEEEEeC
Q 021080 228 GLI-IKQHRDV-RKVVASASEFRRRIGFAMIG-MGDDIYVIGG 267 (317)
Q Consensus 228 ~~~-~~yd~~~-W~~v~~~~~~~~r~~~~~~~-~~~~lyv~GG 267 (317)
+.+ ...|-.+ |+.+.......... +.++. -++++++.|.
T Consensus 270 g~i~~S~DgG~tW~~~~~~~~~~~~~-~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 270 GALLCSQDGGQTWQQDVDVKKVPSNF-YKILFFSPDQGFILGQ 311 (327)
T ss_dssp TCEEEESSTTSSCEECGGGTTSSSCC-CEEEEEETTEEEEECS
T ss_pred CeEEEeCCCCcccEEcCccCCCCCCe-EEEEEECCCceEEEcC
Confidence 334 4456544 99887431101122 23333 3566666553
No 268
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=50.40 E-value=49 Score=31.15 Aligned_cols=152 Identities=13% Similarity=0.046 Sum_probs=80.8
Q ss_pred ceeEEeeCCCCceee-CCCCCccCCCceEE-EEECC-EEEEEecCceeEEEEeCCCCc-------------EEeccCCcc
Q 021080 148 SQAEMYDPEKDVWVP-IPDLHRTHNSACTG-VVIGG-KVHVLHKGLSTVQVLDHMGLG-------------WTVEDYGWL 211 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~-~~~~p~~~r~~~~~-~~~~g-~lyv~gG~~~~v~~yd~~~~~-------------W~~~~~~~~ 211 (317)
+.+-+.|..+.+... +.-.|.+ ..-|.. +.-|| .+|+.+...+.+.+||..+.. -..++....
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC
T ss_pred CcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC
Confidence 567888888744333 2334444 333333 33355 477776678889999998652 222222222
Q ss_pred CCcEE-EEcCeEEEEeC--cEEEEecCCc----------eEEEeccccccccccEEEE-------EECCeEEEEeCcccC
Q 021080 212 QGPMA-IVHDSVYLMSH--GLIIKQHRDV----------RKVVASASEFRRRIGFAMI-------GMGDDIYVIGGVIGP 271 (317)
Q Consensus 212 ~~~~~-~~~~~ly~~g~--~~~~~yd~~~----------W~~v~~~~~~~~r~~~~~~-------~~~~~lyv~GG~~~~ 271 (317)
+...+ .-+|.+|+.-. +.+.++|.+. ++.+..++.. -..+|... ..+..||+.-+....
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 22222 23567777754 6666665433 7777777741 11122222 224578888776533
Q ss_pred CC-CceecccCcceeEeecCCCCCceeecccCCC
Q 021080 272 DR-WNWDIKPMSDVDVLTVGAERPTWRQVSPMTR 304 (317)
Q Consensus 272 ~~-~~~~~~~~~~v~~yd~~~~~~~W~~~~~~p~ 304 (317)
.. .-.+.++.++ .+||++.+ +=+.+...|.
T Consensus 412 r~~~~gp~~~~~~-ql~dis~~--~m~lv~d~p~ 442 (595)
T 1fwx_A 412 RFLNVGPLKPEND-QLIDISGD--KMVLVHDGPT 442 (595)
T ss_dssp SSCCCCSSCCEEE-EEEECSSS--SCEEEEEEEE
T ss_pred ccccCCCCCCCcc-eEEEcCCC--cEEEEEEEcC
Confidence 21 0011123333 67999888 6666655443
No 269
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.20 E-value=1.4e+02 Score=26.81 Aligned_cols=57 Identities=7% Similarity=-0.111 Sum_probs=31.4
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--cCeEEEEeC--cEEEEecCC
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRD 236 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~ 236 (317)
++++.+.++....+..||.....-..+.........+.. ++++.+.++ +.++.+|..
T Consensus 437 d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~ 497 (577)
T 2ymu_A 437 DDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 497 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC
Confidence 666777777566788888766544443322111111122 455555543 567777754
No 270
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=49.56 E-value=1.2e+02 Score=25.67 Aligned_cols=63 Identities=8% Similarity=-0.086 Sum_probs=35.3
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEeccCCccC-CcEEEEcCeEEEEeCcEEEEecCCc-eEEEec
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQ-GPMAIVHDSVYLMSHGLIIKQHRDV-RKVVAS 243 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~-~~~~~~~~~ly~~g~~~~~~yd~~~-W~~v~~ 243 (317)
+.+.+.|+....+..+|..+++-...-..... ..+....+.+.+...+.++.||... .+.+..
T Consensus 71 ~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 71 NYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITD 135 (355)
T ss_dssp SEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSC
T ss_pred CEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEE
Confidence 44556666556899999988763221111111 1222235566666778888888765 244433
No 271
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=49.37 E-value=33 Score=32.63 Aligned_cols=102 Identities=9% Similarity=0.002 Sum_probs=55.6
Q ss_pred EEEEECCEEEEEecCceeEEEEeCCCC-cE--EeccCCcc----CCcEEE-E--cCeEEEEeCcEEEEecCCc----e-E
Q 021080 175 TGVVIGGKVHVLHKGLSTVQVLDHMGL-GW--TVEDYGWL----QGPMAI-V--HDSVYLMSHGLIIKQHRDV----R-K 239 (317)
Q Consensus 175 ~~~~~~g~lyv~gG~~~~v~~yd~~~~-~W--~~~~~~~~----~~~~~~-~--~~~ly~~g~~~~~~yd~~~----W-~ 239 (317)
+.+..+|++|++-| ...++++.... .. ..+...++ ...+|. . ++++|++-|+..|.|+..+ + +
T Consensus 448 Ait~~rg~~yfFKg--~~yWr~~~~~~~~~~P~~Is~~wp~LP~~IDAA~~~~~~~k~yFFkG~~yWry~~~~l~~GYPk 525 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD--RFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPK 525 (631)
T ss_dssp EEEECSSSEEEECS--SEEEEESCTTSCCEEEEEGGGTCTTSCSSCSBCCEETTTTEEEEEETTEEEEEETTEECTTCCE
T ss_pred eeEecCCcEEEEcC--CEEEEEcCCCCCCCCceeccccCCCCCccceEEEEECCCCEEEEEecCEEEEECCCccccCCCc
Confidence 34567899999955 45777765442 11 11222221 222332 2 5789999999999998643 1 1
Q ss_pred EEec--cccccccccEEEE-EECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 240 VVAS--ASEFRRRIGFAMI-GMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 240 ~v~~--~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+.. +|....+..+++. ..++++|++-| +..|.||..++
T Consensus 526 ~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG--------------~~ywryd~~~~ 567 (631)
T 1ck7_A 526 PLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------------DKFWRYNEVKK 567 (631)
T ss_dssp EGGGGTCCTTCCCCCBCCCCTTTCEEEEEET--------------TEEEEEETTTT
T ss_pred cchhcCCCCCCCcceeEEEecCCCeEEEEEC--------------CEEEEEcCCcc
Confidence 2222 2211112223222 13689999976 25677776554
No 272
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=49.15 E-value=1.3e+02 Score=25.98 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=48.2
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEeccCCcc----C---------CcEEEEc----CeEEEEeCcEEEEecC-Cc-eEEE
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL----Q---------GPMAIVH----DSVYLMSHGLIIKQHR-DV-RKVV 241 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~----~---------~~~~~~~----~~ly~~g~~~~~~yd~-~~-W~~v 241 (317)
+.||+... ...+++.+-...+|+.+..... + .....++ +.||+...+.++..+. .+ |+.+
T Consensus 190 ~~l~vg~~-~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G~tW~~~ 268 (394)
T 3b7f_A 190 KHLYIGMS-SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRI 268 (394)
T ss_dssp TCEEEEEE-TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTTTEEECG
T ss_pred CEEEEEEC-CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCCCcceEC
Confidence 57887643 2347778777889998753211 0 1112221 6788877777887754 33 9988
Q ss_pred ec-cccccccccEEEEEE---CCeEEEEe
Q 021080 242 AS-ASEFRRRIGFAMIGM---GDDIYVIG 266 (317)
Q Consensus 242 ~~-~~~~~~r~~~~~~~~---~~~lyv~G 266 (317)
.. ++.......+.++.. .+.||+..
T Consensus 269 ~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 269 GDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp GGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 64 442111233444442 46788764
No 273
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=48.40 E-value=1.2e+02 Score=25.16 Aligned_cols=99 Identities=5% Similarity=-0.081 Sum_probs=52.1
Q ss_pred CEEEEEecCceeEEEEeCCCCcEE-eccCCccCCcEEEE---cCeEEEEeC--cEEEEecCCceEEEecc---ccccccc
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWT-VEDYGWLQGPMAIV---HDSVYLMSH--GLIIKQHRDVRKVVASA---SEFRRRI 251 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~-~~~~~~~~~~~~~~---~~~ly~~g~--~~~~~yd~~~W~~v~~~---~~~~~r~ 251 (317)
+.+++.|+....+..||..+.+-. .+............ ++.+++.++ +.+..||.+.-+.+..+ .. ....
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-HRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-CSSC
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-ccCc
Confidence 677888876778999998876522 22211111122222 445555553 67888887763333322 21 1111
Q ss_pred cEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 GFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
-..+... ++..++.|+.+ ..+.+||+.+.
T Consensus 164 v~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~ 193 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMD------------HSLKLWRINSK 193 (366)
T ss_dssp EEEEEECTTSSEEEEEETT------------SCEEEEESCSH
T ss_pred eeEEEECCCCCEEEEecCC------------CCEEEEECCCC
Confidence 1222222 45666666642 25778888765
No 274
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=46.38 E-value=1.8e+02 Score=26.83 Aligned_cols=25 Identities=12% Similarity=0.068 Sum_probs=19.5
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEE
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWT 204 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~ 204 (317)
+|+..+.|+....+..+|..+.+..
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCcee
Confidence 6777777776778999999887654
No 275
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=45.05 E-value=2e+02 Score=27.03 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=32.2
Q ss_pred ceeEEeeCCCCc---eeeCCCCCccCCCceEEEEECCEEEEEec--CceeEEEEeCCCCcEEec
Q 021080 148 SQAEMYDPEKDV---WVPIPDLHRTHNSACTGVVIGGKVHVLHK--GLSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 148 ~~~~~yd~~t~~---W~~~~~~p~~~r~~~~~~~~~g~lyv~gG--~~~~v~~yd~~~~~W~~~ 206 (317)
..+.++|..+.. |+.+-+-... .........++++++... ....++.+|+....-..+
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~-~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSS-ASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSS-CEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred CEEEEEeCCCCCccCCeEEecCCCC-CeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 456666665543 7766432211 212233445888888765 456788888754433333
No 276
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.00 E-value=11 Score=24.31 Aligned_cols=17 Identities=24% Similarity=0.579 Sum_probs=14.7
Q ss_pred CCCCcHHHHHHHhccCC
Q 021080 5 IEGLPDAVALRCLARVP 21 (317)
Q Consensus 5 ~~~Lp~d~~~~~l~r~p 21 (317)
||.+|++|+.+|+..--
T Consensus 21 FPEvPd~VVsqc~~qN~ 37 (75)
T 2dae_A 21 FPEVPEVVVSRCMLQNN 37 (75)
T ss_dssp SSSSCHHHHHHHHTTTT
T ss_pred cccCcHHHHHHHHHHhc
Confidence 79999999999987654
No 277
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=44.61 E-value=1.8e+02 Score=26.34 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=15.4
Q ss_pred CceEEEEEeCCCCceEEEeCCCC
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRD 77 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~ 77 (317)
...||+-|. .++.++.+|..++
T Consensus 95 r~~l~v~~l-~s~~I~viD~~t~ 116 (462)
T 2ece_A 95 RRFLIVPGL-RSSRIYIIDTKPN 116 (462)
T ss_dssp SCEEEEEBT-TTCCEEEEECCSC
T ss_pred CCEEEEccC-CCCeEEEEECCCC
Confidence 456665554 4588999998766
No 278
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=44.25 E-value=1.3e+02 Score=24.66 Aligned_cols=116 Identities=9% Similarity=-0.117 Sum_probs=60.3
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCc-eEEEeccccc--cccccE
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV-RKVVASASEF--RRRIGF 253 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~-W~~v~~~~~~--~~r~~~ 253 (317)
+.||+++-....+..||+. +..+.............. +|++|+... +.+..|+.+. .+.+...... ..+...
T Consensus 57 ~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 57 RTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPND 135 (305)
T ss_dssp TEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCC
T ss_pred CEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCC
Confidence 4588887666789999984 444433221111111222 678888864 6899998765 5554332210 111222
Q ss_pred EEEEECCeEEEEe---Ccc-cCCC-CceecccCcceeEeecCCCCCceeec
Q 021080 254 AMIGMGDDIYVIG---GVI-GPDR-WNWDIKPMSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 254 ~~~~~~~~lyv~G---G~~-~~~~-~~~~~~~~~~v~~yd~~~~~~~W~~~ 299 (317)
..+.-+|+||+.- |.. .... ..........|++||++++ +.+.+
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g--~~~~~ 184 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS--PLQRM 184 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC--CCEEE
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC--cEEEE
Confidence 2333378898862 221 1000 0000012347889998877 66654
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=43.77 E-value=1.6e+02 Score=25.42 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=50.6
Q ss_pred CCceEEE-EE-CC-EEEEEecCceeEEEEeCCCCcEEeccCC------cc--CCc-EE-EEcCeEEEEeC---cEEEEec
Q 021080 171 NSACTGV-VI-GG-KVHVLHKGLSTVQVLDHMGLGWTVEDYG------WL--QGP-MA-IVHDSVYLMSH---GLIIKQH 234 (317)
Q Consensus 171 r~~~~~~-~~-~g-~lyv~gG~~~~v~~yd~~~~~W~~~~~~------~~--~~~-~~-~~~~~ly~~g~---~~~~~yd 234 (317)
+.+..++ +. +| .|++..+ ...+.+||..+.....++.. .. .-. .. -.+|++.++.. +....++
T Consensus 184 ~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 184 RPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRS 262 (334)
T ss_dssp CCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEEC
T ss_pred ccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEEC
Confidence 4344443 44 35 5666655 77899999875433122210 11 111 12 25888855542 4444455
Q ss_pred CCceEEEecc---ccc-cccccEEEEE----ECCeEEEEeCccc
Q 021080 235 RDVRKVVASA---SEF-RRRIGFAMIG----MGDDIYVIGGVIG 270 (317)
Q Consensus 235 ~~~W~~v~~~---~~~-~~r~~~~~~~----~~~~lyv~GG~~~ 270 (317)
.+.|+..... |.. ..+...+.+. .+++||++.++-.
T Consensus 263 ~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 263 WDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp SSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred CCCcceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 5558765533 321 1222222333 5789999987654
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=42.57 E-value=2.2e+02 Score=26.77 Aligned_cols=161 Identities=10% Similarity=-0.043 Sum_probs=85.0
Q ss_pred CceEEEEEeCCCCceEEEeCCCCCEeecCCCCccccccCCeeEEEe--CCEEEEEcCcCCCCCCCCCCCCCcccccceeE
Q 021080 55 ENLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVST--AGKLFVLGGGSDAVDPLTGDQDGSFATNEVWS 132 (317)
Q Consensus 55 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 132 (317)
+++|++.. ..++...|.....-..+.+++.. ....+++.. ++.||+..-..
T Consensus 6 ~~~Ll~s~---~~~I~~i~l~~~~~~~~~~~~~~---~~~~~l~~d~~~~~lywtD~~~--------------------- 58 (628)
T 4a0p_A 6 EAFLLFSR---RADIRRISLETNNNNVAIPLTGV---KEASALDFDVTDNRIYWTDISL--------------------- 58 (628)
T ss_dssp CCEEEEEE---TTEEEEEESSCTTCEEECCCCSC---SCEEEEEEETTTTEEEEEETTT---------------------
T ss_pred CcEEEEEe---CCcEEEEECCCCCcceEEEcCCC---CceEEEEEECCCCEEEEEECCC---------------------
Confidence 44555443 35788888876554433333321 233444443 57899886531
Q ss_pred ecccCCCCCCCcCCCceeEEeeCCCCceeeCCC--CCccCCCceEEEE--ECCEEEEEecCceeEEEEeCCCCcEEecc-
Q 021080 133 YDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPD--LHRTHNSACTGVV--IGGKVHVLHKGLSTVQVLDHMGLGWTVED- 207 (317)
Q Consensus 133 ~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~~r~~~~~~~--~~g~lyv~gG~~~~v~~yd~~~~~W~~~~- 207 (317)
..+.++++.....+.+.. +..| . ..++ .+++||+.-.....|+++++....=+.+.
T Consensus 59 ---------------~~I~r~~~~g~~~~~v~~~g~~~P---~-GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~ 119 (628)
T 4a0p_A 59 ---------------KTISRAFMNGSALEHVVEFGLDYP---E-GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW 119 (628)
T ss_dssp ---------------TEEEEEETTSCSCEEEECSSCSCC---C-EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC
T ss_pred ---------------CeEEEEECCCCCcEEEEeCCCCCc---c-eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe
Confidence 234444444433333321 2222 1 2333 36899999776678999998655322221
Q ss_pred -CCccCCcEEEE--cCeEEEEeC---cEEEEecCCc--eEEEe-ccccccccccEEEEEE--CCeEEEEe
Q 021080 208 -YGWLQGPMAIV--HDSVYLMSH---GLIIKQHRDV--RKVVA-SASEFRRRIGFAMIGM--GDDIYVIG 266 (317)
Q Consensus 208 -~~~~~~~~~~~--~~~ly~~g~---~~~~~yd~~~--W~~v~-~~~~~~~r~~~~~~~~--~~~lyv~G 266 (317)
.+..+..+++- +|.||..+. ..++..+.+. -+.+. .+. .-.+++.- +++||+.-
T Consensus 120 ~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~-----~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 120 KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVG-----RANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCS-----SEEEEEEETTTTEEEEEE
T ss_pred CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCC-----CcceEEEccccCEEEEEE
Confidence 11113344443 689999983 5788877654 33332 222 12233333 57888874
No 281
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=42.23 E-value=1.9e+02 Score=25.82 Aligned_cols=66 Identities=6% Similarity=0.141 Sum_probs=42.9
Q ss_pred cCeEEEEe-----------CcEEEEecCCceEEEeccccccccccEEEEEE-CC--eEEEEeCcccCCCCceecccCcce
Q 021080 219 HDSVYLMS-----------HGLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GD--DIYVIGGVIGPDRWNWDIKPMSDV 284 (317)
Q Consensus 219 ~~~ly~~g-----------~~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~-~~--~lyv~GG~~~~~~~~~~~~~~~~v 284 (317)
++++|+.. ++.+..+|..+++.+..++. +....++..- ++ ++|+.... .+.|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~------------s~~V 395 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--GHEIDSINVSQDAEPLLYALSAG------------TQTL 395 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEETT------------TTEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCC------------CCeE
Confidence 47899974 25799999999998888873 3323333332 34 56666531 2478
Q ss_pred eEeecCCCCCceeecccC
Q 021080 285 DVLTVGAERPTWRQVSPM 302 (317)
Q Consensus 285 ~~yd~~~~~~~W~~~~~~ 302 (317)
.++|..+. +.+..+
T Consensus 396 sVID~~t~----kvv~tI 409 (426)
T 3c75_H 396 HIYDAATG----EELRSV 409 (426)
T ss_dssp EEEETTTC----CEEEEE
T ss_pred EEEECCCC----CEEEEe
Confidence 99999865 555443
No 282
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=41.65 E-value=2.2e+02 Score=26.37 Aligned_cols=113 Identities=17% Similarity=0.006 Sum_probs=62.1
Q ss_pred eEEEEEeC-CCCceEEEeCCCCCEeecCCCCcccc-ccC---CeeEEEe-CCEEEEEcCcCCCCCCCCCCCCCcccccce
Q 021080 57 LLCVCAFD-PENLWQLYDPLRDLWITLPVLPSKIR-HLA---HFGVVST-AGKLFVLGGGSDAVDPLTGDQDGSFATNEV 130 (317)
Q Consensus 57 ~l~v~gg~-~~~~~~~yd~~~~~W~~~~~~p~~~~-~r~---~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 130 (317)
.+++.+.. ....++.+|..++++..+........ +.. ...++.. ++++++.+.. +
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~------------------ 314 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G------------------ 314 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S------------------
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C------------------
Confidence 34444432 23478889988888888765432200 000 1223333 5666666543 2
Q ss_pred eEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCCceEE-EEECCEEEEEec---CceeEEEEeCCCCcEEec
Q 021080 131 WSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNSACTG-VVIGGKVHVLHK---GLSTVQVLDHMGLGWTVE 206 (317)
Q Consensus 131 ~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~-~~~~g~lyv~gG---~~~~v~~yd~~~~~W~~~ 206 (317)
...++.+|..+++.+.+..- .. ..... ...++.+++..+ ....++.+|+.+++...+
T Consensus 315 ----------------~~~l~~~d~~~~~~~~l~~~-~~--~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 315 ----------------AAVLGILDPESGELVDAAGP-WT--EWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ----------------SCEEEEEETTTTEEEECCSS-CC--EEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred ----------------ccEEEEEECCCCcEEEecCC-CC--eEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 24566677777776666432 11 11122 345666766655 335788889988887766
Q ss_pred c
Q 021080 207 D 207 (317)
Q Consensus 207 ~ 207 (317)
.
T Consensus 376 ~ 376 (662)
T 3azo_A 376 G 376 (662)
T ss_dssp E
T ss_pred e
Confidence 3
No 283
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=37.85 E-value=1.4e+02 Score=25.51 Aligned_cols=65 Identities=15% Similarity=0.256 Sum_probs=41.9
Q ss_pred cCeEEEEeC------------cEEEEecCCceEEEeccccccccccEEEEEE--CCeEEEEeCcccCCCCceecccCcce
Q 021080 219 HDSVYLMSH------------GLIIKQHRDVRKVVASASEFRRRIGFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDV 284 (317)
Q Consensus 219 ~~~ly~~g~------------~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v 284 (317)
++++|+... +.++.+|.++.+.+..++. .. ..+++.- +.+||+.++ +.|
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--~~-p~~ia~spdg~~l~v~n~--------------~~v 327 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--RD-ALSMTIDQQRNLMLTLDG--------------GNV 327 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--TT-CCEEEEETTTTEEEEECS--------------SCE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--CC-eeEEEECCCCCEEEEeCC--------------CeE
Confidence 478998742 4799999999888888773 23 3344333 446666542 278
Q ss_pred eEeecCCCCCceeecccC
Q 021080 285 DVLTVGAERPTWRQVSPM 302 (317)
Q Consensus 285 ~~yd~~~~~~~W~~~~~~ 302 (317)
.+||.++. +=+.+..+
T Consensus 328 ~v~D~~t~--~l~~~~~i 343 (361)
T 2oiz_A 328 NVYDISQP--EPKLLRTI 343 (361)
T ss_dssp EEEECSSS--SCEEEEEE
T ss_pred EEEECCCC--cceeeEEe
Confidence 88998754 22666554
No 284
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=36.95 E-value=2.6e+02 Score=26.01 Aligned_cols=101 Identities=11% Similarity=-0.016 Sum_probs=50.0
Q ss_pred CCEEEEEec--CceeEEEEeCCCCcEEeccCCccCC-cEEEE---cCeEEEEeC------cEEEEecCCc--eEEEeccc
Q 021080 180 GGKVHVLHK--GLSTVQVLDHMGLGWTVEDYGWLQG-PMAIV---HDSVYLMSH------GLIIKQHRDV--RKVVASAS 245 (317)
Q Consensus 180 ~g~lyv~gG--~~~~v~~yd~~~~~W~~~~~~~~~~-~~~~~---~~~ly~~g~------~~~~~yd~~~--W~~v~~~~ 245 (317)
+|++++.+. ....++.+|........+....... ..... ++.||+.+. ..++.+|.+. .+.+...
T Consensus 322 dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~- 400 (706)
T 2z3z_A 322 NNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPE- 400 (706)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCS-
T ss_pred CCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCC-
Confidence 677666654 3456888887766666664321111 11122 335666653 2677777654 4444321
Q ss_pred cccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 246 EFRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 246 ~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.........-+++.+++...... ...+++++|.+++
T Consensus 401 ---~~~~~~~~spdg~~l~~~~~~~~--------~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 401 ---SGMHRTQLSPDGSAIIDIFQSPT--------VPRKVTVTNIGKG 436 (706)
T ss_dssp ---SSEEEEEECTTSSEEEEEEECSS--------CSCEEEEEESSSC
T ss_pred ---CceEEEEECCCCCEEEEEecCCC--------CCcEEEEEECCCC
Confidence 11111122224555555432221 1236777777766
No 285
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=36.84 E-value=2.4e+02 Score=25.42 Aligned_cols=188 Identities=14% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCCCCE--eecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccceeEecccCCCCCCCcCCCceeE
Q 021080 74 PLRDLW--ITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNEVWSYDPVTRGFTSCRKSISQAE 151 (317)
Q Consensus 74 ~~~~~W--~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~~~~~~~~~~~~ 151 (317)
...+.| ++|+..|.. ..-|+.+.+++.=|++|=-++.. ...++-.+....
T Consensus 267 F~~spW~~t~L~~i~~v---Te~HSFa~i~~~~fa~GyHnGDv-----------~PRe~G~~yfs~-------------- 318 (670)
T 3ju4_A 267 FHKSPWRKTDLGLIPSV---TEVHSFATIDNNGFAMGYHQGDV-----------APREVGLFYFPD-------------- 318 (670)
T ss_dssp STTSCCEEEECCSCTTC---SEEEEEEECSSSCEEEEEEECSS-----------SSCEEEEEEETT--------------
T ss_pred eccCCceecccccccce---eeeeeeeEecCCceEEEeccCCC-----------CcceeeEEEecc--------------
Q ss_pred EeeCCCCceeeCCCCCccCCCceEEE--EECCEEEEEec------CceeEEEEeCCCCcEEeccCCcc----CCcEEEEc
Q 021080 152 MYDPEKDVWVPIPDLHRTHNSACTGV--VIGGKVHVLHK------GLSTVQVLDHMGLGWTVEDYGWL----QGPMAIVH 219 (317)
Q Consensus 152 ~yd~~t~~W~~~~~~p~~~r~~~~~~--~~~g~lyv~gG------~~~~v~~yd~~~~~W~~~~~~~~----~~~~~~~~ 219 (317)
.|+.-.+.=++.-+.-.. +....-+ .++|+||++.. ....+.+-+.....|+.+.-.-. ..+.+.++
T Consensus 319 ~~~sp~~~vrr~i~sey~-~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvg 397 (670)
T 3ju4_A 319 AFNSPSNYVRRQIPSEYE-PDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVG 397 (670)
T ss_dssp TTTCTTCCEEEECCGGGC-TTEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEET
T ss_pred cccCCcceeeeechhhhc-cccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeC
Q ss_pred CeEEEEeC----------------------cEEEEecCCc-------eEEEe-----ccccccccccEEEEEECCeEE-E
Q 021080 220 DSVYLMSH----------------------GLIIKQHRDV-------RKVVA-----SASEFRRRIGFAMIGMGDDIY-V 264 (317)
Q Consensus 220 ~~ly~~g~----------------------~~~~~yd~~~-------W~~v~-----~~~~~~~r~~~~~~~~~~~ly-v 264 (317)
+.||+++. .-+.+.+... |..+. .--....-.-..++.-++-|| +
T Consensus 398 D~l~mFgsERA~nEWE~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyi 477 (670)
T 3ju4_A 398 DDLIMFGSERAENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYM 477 (670)
T ss_dssp TEEEEEEECSSTTCSSTTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEE
T ss_pred CEEEEEeccccccccccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEE
Q ss_pred EeCcccCCCCce----------ecccCcceeEeecC
Q 021080 265 IGGVIGPDRWNW----------DIKPMSDVDVLTVG 290 (317)
Q Consensus 265 ~GG~~~~~~~~~----------~~~~~~~v~~yd~~ 290 (317)
|||.+-...+.. +...-.++++|.+.
T Consensus 478 FGgEd~~np~s~gdN~~k~~~~~~Ghp~dlY~~ri~ 513 (670)
T 3ju4_A 478 FGGEDHFNPWTYGDNSAKDPFKSDGHPSDLYCYKMK 513 (670)
T ss_dssp EEEBCSCCCCTTTTTTTCCTTSTTCCCCEEEEEEEE
T ss_pred ecCcccCCccccccccccCccccCCCCcceEEEEEE
No 286
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=36.27 E-value=2.7e+02 Score=26.03 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=49.3
Q ss_pred CCEEEEEe-cCceeEEEEeCCCCcEEec-cCCcc-CCcEEEE--cCeEEEEeC--cEEEEecCCc--eEEEecccccccc
Q 021080 180 GGKVHVLH-KGLSTVQVLDHMGLGWTVE-DYGWL-QGPMAIV--HDSVYLMSH--GLIIKQHRDV--RKVVASASEFRRR 250 (317)
Q Consensus 180 ~g~lyv~g-G~~~~v~~yd~~~~~W~~~-~~~~~-~~~~~~~--~~~ly~~g~--~~~~~yd~~~--W~~v~~~~~~~~r 250 (317)
+|.||+.- |....|++.++....=..+ ..... +..++.- +++||+.+. +.+..++.+. =+.+... ...
T Consensus 446 ~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~---~l~ 522 (619)
T 3s94_A 446 VGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVED---KIP 522 (619)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEEC---CCC
T ss_pred CCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEecc---CCC
Confidence 58999986 3346788888754322222 21111 2233332 579999986 6888888765 2333211 111
Q ss_pred ccEEEEEECCeEEEEe
Q 021080 251 IGFAMIGMGDDIYVIG 266 (317)
Q Consensus 251 ~~~~~~~~~~~lyv~G 266 (317)
.-++++..++.||+.-
T Consensus 523 ~P~glav~~~~ly~tD 538 (619)
T 3s94_A 523 HIFGFTLLGDYVYWTD 538 (619)
T ss_dssp SSCCEEEETTEEEEEC
T ss_pred CcEEEEEECCEEEEee
Confidence 2346778899999985
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=35.92 E-value=2.3e+02 Score=25.05 Aligned_cols=97 Identities=7% Similarity=-0.031 Sum_probs=53.7
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEeccCCcc-CCcEEE-EcCeEEEEeC------cEEEEecCCc-eEEEeccccccccc
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL-QGPMAI-VHDSVYLMSH------GLIIKQHRDV-RKVVASASEFRRRI 251 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~-~~~~~~-~~~~ly~~g~------~~~~~yd~~~-W~~v~~~~~~~~r~ 251 (317)
|.||+.-.. ..|.++|+.++....+..... +..++. -++.||+.+. ..+..++.+. +.....++. ..+.
T Consensus 153 g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~-~~~P 230 (433)
T 4hw6_A 153 DDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCN-ARGA 230 (433)
T ss_dssp CEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEE-CSSB
T ss_pred CEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccc-cCCC
Confidence 899998543 789999998888776654322 222222 2566999874 3466666554 431111111 1111
Q ss_pred cEEEEEE--CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 252 GFAMIGM--GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 252 ~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.+++.. ++.||+... ....|++||++++
T Consensus 231 -~giavd~~~G~lyv~d~------------~~~~V~~~d~~~g 260 (433)
T 4hw6_A 231 -KTCAVHPQNGKIYYTRY------------HHAMISSYDPATG 260 (433)
T ss_dssp -CCCEECTTTCCEEECBT------------TCSEEEEECTTTC
T ss_pred -CEEEEeCCCCeEEEEEC------------CCCEEEEEECCCC
Confidence 223332 577887632 1235777777655
No 288
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.85 E-value=1.9e+02 Score=27.83 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=52.5
Q ss_pred CceeeCCCCCccCCCceEEEEE-CCEEEEEec---------CceeEEEEeCCCCcEEeccCCccC-----C--cEEEE--
Q 021080 158 DVWVPIPDLHRTHNSACTGVVI-GGKVHVLHK---------GLSTVQVLDHMGLGWTVEDYGWLQ-----G--PMAIV-- 218 (317)
Q Consensus 158 ~~W~~~~~~p~~~r~~~~~~~~-~g~lyv~gG---------~~~~v~~yd~~~~~W~~~~~~~~~-----~--~~~~~-- 218 (317)
.+|+.+..+|.. ...+..++. ++.+|+..+ ....+++++-...+|+.+...+.. . ....+
T Consensus 232 ~tW~~~~~~p~~-~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p 310 (737)
T 2cn3_A 232 VTWKAVPGQPKG-LLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDR 310 (737)
T ss_dssp SCCEECTTCCCS-SEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECT
T ss_pred CceEECCCCCCc-ccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcC
Confidence 479999877765 433434433 789998753 235788999999999998764321 1 11222
Q ss_pred --cCeEEEEeCc-------EEEEecCCc-eEEE
Q 021080 219 --HDSVYLMSHG-------LIIKQHRDV-RKVV 241 (317)
Q Consensus 219 --~~~ly~~g~~-------~~~~yd~~~-W~~v 241 (317)
.+.+|+.... ....-|-.+ |+.+
T Consensus 311 ~~~~~ly~~~~~~~~~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 311 QNPDIIMVTSMNAWWPDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp TCTTCEEEEEECCCSSCCCEEEESSTTSSCEES
T ss_pred CCCCEEEEEecccCCCCccEEEeCCCCccccch
Confidence 3678888643 223345444 9888
No 289
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=34.25 E-value=1.8e+02 Score=23.41 Aligned_cols=22 Identities=14% Similarity=-0.019 Sum_probs=16.1
Q ss_pred CCEEEEEecCceeEEEEeCCCC
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~ 201 (317)
++.+++.|+....+..||..+.
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEEcCCCeEEEEecCCC
Confidence 3677777776667888888764
No 290
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=33.20 E-value=3.1e+02 Score=25.72 Aligned_cols=91 Identities=11% Similarity=0.005 Sum_probs=48.8
Q ss_pred ceeEEEEeCCCCcEEeccCCccC-CcEEEEcCeEEEEeC-----cEEEEecCCc-----eEEEeccccccccccEEEEEE
Q 021080 190 LSTVQVLDHMGLGWTVEDYGWLQ-GPMAIVHDSVYLMSH-----GLIIKQHRDV-----RKVVASASEFRRRIGFAMIGM 258 (317)
Q Consensus 190 ~~~v~~yd~~~~~W~~~~~~~~~-~~~~~~~~~ly~~g~-----~~~~~yd~~~-----W~~v~~~~~~~~r~~~~~~~~ 258 (317)
...++.+|..+..|..+...... ...+..+|.+|+... ..++.+|.+. |+.+-...+ ...-..+...
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~l~~~~~~ 328 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS--SASLLSVSIV 328 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS--SCEEEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC--CCeEEEEEEE
Confidence 34677777767777766533221 111224556666653 5788887643 887754321 1111223334
Q ss_pred CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 259 GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 259 ~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
+++|++....+.. ..++++++..+
T Consensus 329 ~~~lv~~~~~dg~----------~~l~~~~~~g~ 352 (695)
T 2bkl_A 329 GGHLSLEYLKDAT----------SEVRVATLKGK 352 (695)
T ss_dssp TTEEEEEEEETTE----------EEEEEEETTCC
T ss_pred CCEEEEEEEECCE----------EEEEEEeCCCC
Confidence 7888777654322 35677776543
No 291
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=32.49 E-value=3.2e+02 Score=25.70 Aligned_cols=89 Identities=7% Similarity=-0.006 Sum_probs=51.8
Q ss_pred ceeEEEEeCCCC--cEEeccCCccC--CcEEEEcCeEEEEeC-----cEEEEecCCc-----eEEEeccccccccccEEE
Q 021080 190 LSTVQVLDHMGL--GWTVEDYGWLQ--GPMAIVHDSVYLMSH-----GLIIKQHRDV-----RKVVASASEFRRRIGFAM 255 (317)
Q Consensus 190 ~~~v~~yd~~~~--~W~~~~~~~~~--~~~~~~~~~ly~~g~-----~~~~~yd~~~-----W~~v~~~~~~~~r~~~~~ 255 (317)
.+.++.+|..+. .|..+...... .....-++.+|+... ..++..+.+. |+.+..-.. ... .+
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~--~~ 333 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ--QVL--TV 333 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS--SCE--EE
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC--CEE--EE
Confidence 358888898765 67766543321 123344778888864 5788887543 887655432 111 44
Q ss_pred EEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 256 IGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 256 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
...++.|++..-.+. ...++++|++.+
T Consensus 334 s~~g~~lv~~~~~~g----------~~~l~~~d~~g~ 360 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDA----------TARVEQFDYEGK 360 (693)
T ss_dssp EEETTEEEEEEEETT----------EEEEEEECTTSC
T ss_pred EEECCEEEEEEEECC----------eeEEEEEECCCC
Confidence 555666665443221 236777777654
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=31.97 E-value=2.3e+02 Score=23.75 Aligned_cols=86 Identities=9% Similarity=0.100 Sum_probs=45.7
Q ss_pred CCceeeCCCCC-ccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc--CCcEEEE-cCeEEEEeC-cEEE
Q 021080 157 KDVWVPIPDLH-RTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL--QGPMAIV-HDSVYLMSH-GLII 231 (317)
Q Consensus 157 t~~W~~~~~~p-~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~--~~~~~~~-~~~ly~~g~-~~~~ 231 (317)
-.+|+.+.... .+......++.-++.+|+.+. ...+++-+-.-.+|+.+..... ...++.. ++++++++. +.++
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 45899886431 220112223345788988875 2345554444567998864322 1112211 567777764 4444
Q ss_pred Ee-cC--CceEEEec
Q 021080 232 KQ-HR--DVRKVVAS 243 (317)
Q Consensus 232 ~y-d~--~~W~~v~~ 243 (317)
.- |. ++|+.+..
T Consensus 187 ~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 187 STWEPGQTAWEPHNR 201 (327)
T ss_dssp EEECTTCSSCEEEEC
T ss_pred EEeCCCCCceeECCC
Confidence 43 44 33999854
No 293
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=31.68 E-value=30 Score=20.22 Aligned_cols=21 Identities=19% Similarity=0.203 Sum_probs=16.7
Q ss_pred CcCCCCcHHHHHHHhccCCCC
Q 021080 3 ELIEGLPDAVALRCLARVPFF 23 (317)
Q Consensus 3 ~~~~~Lp~d~~~~~l~r~p~~ 23 (317)
+.|..||.|+-+++|+.-...
T Consensus 19 eVF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 19 EVFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp GGTTTSCHHHHHHHTTCCCSC
T ss_pred HHHHHCcHHHHHHHHhcchHH
Confidence 467889999999999876544
No 294
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=31.47 E-value=3e+02 Score=24.96 Aligned_cols=107 Identities=11% Similarity=-0.080 Sum_probs=54.0
Q ss_pred EEEECC-EEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEEcCeEEEEeC------cEEEEecCCc--eEEEecccc
Q 021080 176 GVVIGG-KVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIVHDSVYLMSH------GLIIKQHRDV--RKVVASASE 246 (317)
Q Consensus 176 ~~~~~g-~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ly~~g~------~~~~~yd~~~--W~~v~~~~~ 246 (317)
+...+| .++++.+....+..||+.+++-..+...........-+|+..++.. ..++.+|.++ .+.+...+.
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~ 195 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG 195 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC
Confidence 444555 4555544344455888888776655432221122223565444321 4688888655 776644331
Q ss_pred ccccccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCCCCcee
Q 021080 247 FRRRIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAERPTWR 297 (317)
Q Consensus 247 ~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~~~~W~ 297 (317)
........-+|+.++.+..+ ....++++|++++ +..
T Consensus 196 ---~~~~~~~SpDG~~l~~~~~~----------~~~~i~~~d~~~~--~~~ 231 (582)
T 3o4h_A 196 ---SFSSASISPGMKVTAGLETA----------REARLVTVDPRDG--SVE 231 (582)
T ss_dssp ---EEEEEEECTTSCEEEEEECS----------SCEEEEEECTTTC--CEE
T ss_pred ---ccccceECCCCCEEEEccCC----------CeeEEEEEcCCCC--cEE
Confidence 11111122255544432211 1237889999887 554
No 295
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=30.26 E-value=2.6e+02 Score=23.99 Aligned_cols=51 Identities=4% Similarity=-0.111 Sum_probs=29.4
Q ss_pred CceEEEEEe-CCCC--ceEEEeCCCCCEeecCCCCccccccCCeeEEEeCCEEEEEcC
Q 021080 55 ENLLCVCAF-DPEN--LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGG 109 (317)
Q Consensus 55 ~~~l~v~gg-~~~~--~~~~yd~~~~~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG 109 (317)
...+|+.-+ .... .+..||+.+++-. ..+|.. ...+..+.--+.++||..-
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~~i~~g--~~p~i~~spDg~~lyv~n~ 85 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSIL--GHVNGG--FLPNPVAAHSGSEFALAST 85 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEE--EEecCC--CCCCeEECCCCCEEEEEec
Confidence 567888764 2211 7899999887643 334432 1223333334667898864
No 296
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=29.78 E-value=2.5e+02 Score=23.56 Aligned_cols=62 Identities=10% Similarity=-0.049 Sum_probs=32.9
Q ss_pred cCeEEEEeC--cE-EEEecCCceEEEeccccc-cccccEEEEE-ECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 219 HDSVYLMSH--GL-IIKQHRDVRKVVASASEF-RRRIGFAMIG-MGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 219 ~~~ly~~g~--~~-~~~yd~~~W~~v~~~~~~-~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
++++.+.++ +. +..+|..+.+.+..+... ....-..+.. -+++.++.|+.+ ..|.+||+++.
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d------------~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK------------WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT------------CEEEEEESSCC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC------------CEEEEEEccCC
Confidence 455555543 54 899998876555544310 1111112222 256777776643 25677777654
No 297
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=27.73 E-value=4.6e+02 Score=26.02 Aligned_cols=109 Identities=8% Similarity=-0.079 Sum_probs=51.9
Q ss_pred CCEEEEEecCceeEE-EEeCCCCcEEeccCCccCCcEEEE--cCeEEEEe-C-cEEEEecCCc--eEEEecccccccccc
Q 021080 180 GGKVHVLHKGLSTVQ-VLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMS-H-GLIIKQHRDV--RKVVASASEFRRRIG 252 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~-~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g-~-~~~~~yd~~~--W~~v~~~~~~~~r~~ 252 (317)
+|+.+++++....++ .||..+..-..+............ +++..++. . +.++.+|.++ -..+.... .....
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~--~~~v~ 424 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR--EAMIT 424 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--SSCCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC--CCCcc
Confidence 665444444456788 899888776655421111111122 44444333 2 6888888766 33332111 11111
Q ss_pred EEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 253 FAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 253 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
.....-+|+.+++++........ ......+++||+.++
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~~--~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGETD--GYVMQAIHVYDMEGR 462 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTTC--SCCEEEEEEEETTTT
T ss_pred ceEECCCCCeEEEEecCcccccc--CCCCCeEEEEECCCC
Confidence 12222356655555543200000 012347888888876
No 298
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=27.62 E-value=3e+02 Score=23.77 Aligned_cols=20 Identities=20% Similarity=0.074 Sum_probs=15.7
Q ss_pred EEEEEecCceeEEEEeCCCC
Q 021080 182 KVHVLHKGLSTVQVLDHMGL 201 (317)
Q Consensus 182 ~lyv~gG~~~~v~~yd~~~~ 201 (317)
.+++.|+....+..||..+.
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNL 310 (430)
T ss_dssp TEEEEEETTSEEEEEETTCT
T ss_pred CEEEEEeCCCeEEEEeCCCC
Confidence 47888887778999998763
No 299
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=26.51 E-value=56 Score=27.24 Aligned_cols=16 Identities=19% Similarity=0.013 Sum_probs=11.9
Q ss_pred ceEEEEECCEEEEEec
Q 021080 173 ACTGVVIGGKVHVLHK 188 (317)
Q Consensus 173 ~~~~~~~~g~lyv~gG 188 (317)
.|+.+.-+|++|..|.
T Consensus 151 ~~~~~l~~G~v~~wG~ 166 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGD 166 (282)
T ss_dssp SEEEEEETTEEEEEEC
T ss_pred CEEEEEECCEEEEecC
Confidence 4455556999999986
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=25.66 E-value=3.5e+02 Score=23.87 Aligned_cols=86 Identities=9% Similarity=0.030 Sum_probs=49.6
Q ss_pred ceeEEeeCCCCceeeCCC-CCccCCCceEEEEECCEEEEEec----CceeEEEEeCCCCcEE---eccCCccCCcEEEE-
Q 021080 148 SQAEMYDPEKDVWVPIPD-LHRTHNSACTGVVIGGKVHVLHK----GLSTVQVLDHMGLGWT---VEDYGWLQGPMAIV- 218 (317)
Q Consensus 148 ~~~~~yd~~t~~W~~~~~-~p~~~r~~~~~~~~~g~lyv~gG----~~~~v~~yd~~~~~W~---~~~~~~~~~~~~~~- 218 (317)
..+.++|+.+++...+.. +..+ ..-++--+|.||+... ....+..++.... +. .++....+..+++-
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P---~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~-~~~~~~~~~~~~P~giavd~ 237 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQC---ADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG-FTERLSLCNARGAKTCAVHP 237 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCE---EEEEECTTCCEEEEECCSCTTSEEEEEECGGGT-TCCEEEEEECSSBCCCEECT
T ss_pred CCEEEEECCCCEEEEeecCCCCc---cEEEECCCCCEEEEcCCCCcccceEEEEECCCC-eeccccccccCCCCEEEEeC
Confidence 678899998888776643 2222 2222233567998853 1234666665322 21 22222223344443
Q ss_pred -cCeEEEEeC--cEEEEecCCc
Q 021080 219 -HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 219 -~~~ly~~g~--~~~~~yd~~~ 237 (317)
++.||+.+. +.+++|+++.
T Consensus 238 ~~G~lyv~d~~~~~V~~~d~~~ 259 (433)
T 4hw6_A 238 QNGKIYYTRYHHAMISSYDPAT 259 (433)
T ss_dssp TTCCEEECBTTCSEEEEECTTT
T ss_pred CCCeEEEEECCCCEEEEEECCC
Confidence 688998874 6899999874
No 301
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=25.60 E-value=92 Score=26.93 Aligned_cols=64 Identities=8% Similarity=-0.025 Sum_probs=34.9
Q ss_pred CCEEEEEec-CceeEEEEeCCCCcEEeccCCcc---CCcEE------E-------EcCeEEEEeC-cEEEEecCCc----
Q 021080 180 GGKVHVLHK-GLSTVQVLDHMGLGWTVEDYGWL---QGPMA------I-------VHDSVYLMSH-GLIIKQHRDV---- 237 (317)
Q Consensus 180 ~g~lyv~gG-~~~~v~~yd~~~~~W~~~~~~~~---~~~~~------~-------~~~~ly~~g~-~~~~~yd~~~---- 237 (317)
++.+|++.. ....++.||..++.|.---..+. ..+.. + .++.+|+-.. +.++..|..+
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 567777642 45678888887776542111111 11222 1 4566665554 6788887665
Q ss_pred eEEEec
Q 021080 238 RKVVAS 243 (317)
Q Consensus 238 W~~v~~ 243 (317)
|+.-..
T Consensus 135 W~~~~~ 140 (339)
T 2be1_A 135 SAFGPG 140 (339)
T ss_dssp EEESTT
T ss_pred EEEecC
Confidence 776433
No 302
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=25.41 E-value=4.4e+02 Score=24.94 Aligned_cols=114 Identities=11% Similarity=0.013 Sum_probs=63.2
Q ss_pred CceEEEEEeC---CCCceEEEeCCCC--C-EeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCccccc
Q 021080 55 ENLLCVCAFD---PENLWQLYDPLRD--L-WITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATN 128 (317)
Q Consensus 55 ~~~l~v~gg~---~~~~~~~yd~~~~--~-W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 128 (317)
+.+|++.... ..++++.+|..+. . |..+..-... . ...+...++.||+......
T Consensus 279 G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~-~~~~~~dg~~l~~~s~~~~---------------- 338 (741)
T 1yr2_A 279 GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA---Q-WDFVDGVGDQLWFVSGDGA---------------- 338 (741)
T ss_dssp SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS---C-EEEEEEETTEEEEEECTTC----------------
T ss_pred CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc---e-EEEEeccCCEEEEEECCCC----------------
Confidence 3355555443 2468888888776 6 7776432221 1 1122345677777754321
Q ss_pred ceeEecccCCCCCCCcCCCceeEEeeCCC--CceeeCCCCCccCCCceEEEEECCEEEEEec--CceeEEEEeCCCCcEE
Q 021080 129 EVWSYDPVTRGFTSCRKSISQAEMYDPEK--DVWVPIPDLHRTHNSACTGVVIGGKVHVLHK--GLSTVQVLDHMGLGWT 204 (317)
Q Consensus 129 ~~~~~d~~~~G~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG--~~~~v~~yd~~~~~W~ 204 (317)
....++++|..+ ..|+.+-+-... . .......++++++... ....++.+|+..+.-.
T Consensus 339 -----------------~~~~l~~~d~~~~~~~~~~l~~~~~~-~-l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 339 -----------------PLKKIVRVDLSGSTPRFDTVVPESKD-N-LESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp -----------------TTCEEEEEECSSSSCEEEEEECCCSS-E-EEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred -----------------CCCEEEEEeCCCCccccEEEecCCCC-e-EEEEEEECCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 124567777766 478876432221 1 1223445888888765 4567888887655444
Q ss_pred ecc
Q 021080 205 VED 207 (317)
Q Consensus 205 ~~~ 207 (317)
.+.
T Consensus 400 ~l~ 402 (741)
T 1yr2_A 400 AVS 402 (741)
T ss_dssp ECB
T ss_pred ecc
Confidence 443
No 303
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=25.33 E-value=3.6e+02 Score=24.01 Aligned_cols=58 Identities=9% Similarity=-0.091 Sum_probs=30.9
Q ss_pred CCEEEEEecCceeEEEEeCCCCcEEeccCCccCCcEEEE--cCeEEEEeC--cEEEEecCCc
Q 021080 180 GGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDV 237 (317)
Q Consensus 180 ~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~ 237 (317)
+++..+.|+....+..||.....-..+...........+ +++..+.++ +.+..||...
T Consensus 355 ~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~ 416 (577)
T 2ymu_A 355 DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 416 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC
T ss_pred CCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 667777777666788888765544443322111111122 445444443 6788887543
No 304
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=25.30 E-value=2.8e+02 Score=22.70 Aligned_cols=64 Identities=6% Similarity=-0.085 Sum_probs=33.7
Q ss_pred CEEEEEecCceeEEEEeCCCCcEEec-cCCccCCcEEEE--cCeEEEEeC--cEEEEecCCceEEEecc
Q 021080 181 GKVHVLHKGLSTVQVLDHMGLGWTVE-DYGWLQGPMAIV--HDSVYLMSH--GLIIKQHRDVRKVVASA 244 (317)
Q Consensus 181 g~lyv~gG~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~--~~~ly~~g~--~~~~~yd~~~W~~v~~~ 244 (317)
+.+++.|+....+..||+.+.+-... .........+.. ++++++.++ +.+..+|...-+.+..+
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 34566666667788899877653221 100001111112 455555554 67888888764444333
No 305
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=23.71 E-value=3.1e+02 Score=22.64 Aligned_cols=14 Identities=14% Similarity=0.155 Sum_probs=10.0
Q ss_pred CCceEEEeCCCCCE
Q 021080 66 ENLWQLYDPLRDLW 79 (317)
Q Consensus 66 ~~~~~~yd~~~~~W 79 (317)
...+..||..+++.
T Consensus 97 D~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 97 DKTLRLWDLRTGTT 110 (343)
T ss_dssp TSEEEEEETTSSCE
T ss_pred CCcEEEEECCCCcE
Confidence 35778888887654
No 306
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=23.60 E-value=1.9e+02 Score=25.06 Aligned_cols=73 Identities=11% Similarity=0.063 Sum_probs=46.9
Q ss_pred cCeEEEE-e---C------cEEEEecCCceEEEeccccccccccEEEEEE-CC-eEEEEeCcccCCCCceecccCcceeE
Q 021080 219 HDSVYLM-S---H------GLIIKQHRDVRKVVASASEFRRRIGFAMIGM-GD-DIYVIGGVIGPDRWNWDIKPMSDVDV 286 (317)
Q Consensus 219 ~~~ly~~-g---~------~~~~~yd~~~W~~v~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~v~~ 286 (317)
++++|+. . + +.+..+|..+.+.+..++. +....++..- ++ ++|+..+.. .++|-+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v--g~~p~gi~~s~Dg~~l~va~~~~-----------~~~VsV 341 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN--GHDSDAIIAAQDGASDNYANSAG-----------TEVLDI 341 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--EEEECEEEECCSSSCEEEEEETT-----------TTEEEE
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--CCCcceEEECCCCCEEEEEccCC-----------CCeEEE
Confidence 4679974 3 2 4667999999998888883 3333344433 44 477765521 247889
Q ss_pred eecCCCCCceeecccCCCCCCc
Q 021080 287 LTVGAERPTWRQVSPMTRCRGT 308 (317)
Q Consensus 287 yd~~~~~~~W~~~~~~p~~~~~ 308 (317)
+|+.+ |+.+..++..+.-
T Consensus 342 ID~~t----~kvv~~I~vg~~P 359 (368)
T 1mda_H 342 YDAAS----DQDQSSVELDKGP 359 (368)
T ss_dssp EESSS----CEEEEECCCCSCC
T ss_pred EECCC----CcEEEEEECCCCC
Confidence 99874 4777777655543
No 307
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=21.90 E-value=4.8e+02 Score=24.15 Aligned_cols=138 Identities=9% Similarity=0.008 Sum_probs=68.9
Q ss_pred CceeEEeeCCCCceeeCCCCCccCCCceEEEE--ECCE-EEEEec----CceeEEEEeCCCC-cEEeccCCcc------C
Q 021080 147 ISQAEMYDPEKDVWVPIPDLHRTHNSACTGVV--IGGK-VHVLHK----GLSTVQVLDHMGL-GWTVEDYGWL------Q 212 (317)
Q Consensus 147 ~~~~~~yd~~t~~W~~~~~~p~~~r~~~~~~~--~~g~-lyv~gG----~~~~v~~yd~~~~-~W~~~~~~~~------~ 212 (317)
...++++|..+++-..+...... ......+. -||+ |++... ....+..+|+.++ ....+..... .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 46789999998876655432111 11222222 2565 554332 2247899999888 6654431100 0
Q ss_pred CcEEE-E--cCeEEEEeC----cEEEEecCCc--eEEEeccccccccccEEEEEE---CCeEEEEeCcccCCCCceeccc
Q 021080 213 GPMAI-V--HDSVYLMSH----GLIIKQHRDV--RKVVASASEFRRRIGFAMIGM---GDDIYVIGGVIGPDRWNWDIKP 280 (317)
Q Consensus 213 ~~~~~-~--~~~ly~~g~----~~~~~yd~~~--W~~v~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~ 280 (317)
...+. - +++++..+. ..++.++.+. .+.+.... .... ..+.+ ++.||+.+..+.. .
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~v~--~~~~~spdg~~l~~~~~~~~~--------~ 380 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE--WEVT--NFAGFDPKGTRLYFESTEASP--------L 380 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS--SCEE--EEEEECTTSSEEEEEESSSCT--------T
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC--eEEE--eeeEEcCCCCEEEEEecCCCC--------c
Confidence 11222 2 666555442 4677777433 55543221 1111 11222 3456666554321 1
Q ss_pred CcceeEeecCCCCCceeec
Q 021080 281 MSDVDVLTVGAERPTWRQV 299 (317)
Q Consensus 281 ~~~v~~yd~~~~~~~W~~~ 299 (317)
...++.+|.+++ +.+.+
T Consensus 381 ~~~l~~~d~~~~--~~~~l 397 (706)
T 2z3z_A 381 ERHFYCIDIKGG--KTKDL 397 (706)
T ss_dssp CBEEEEEETTCC--CCEES
T ss_pred eEEEEEEEcCCC--Cceec
Confidence 246777787776 55544
No 308
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=21.67 E-value=4.9e+02 Score=24.95 Aligned_cols=125 Identities=10% Similarity=0.133 Sum_probs=0.0
Q ss_pred CceeeCCCCCccCCCceEEEEECCEEEEEecCceeEEEEeCCCCcEEeccCCcc---CCcEEEE------cCeEEEEeCc
Q 021080 158 DVWVPIPDLHRTHNSACTGVVIGGKVHVLHKGLSTVQVLDHMGLGWTVEDYGWL---QGPMAIV------HDSVYLMSHG 228 (317)
Q Consensus 158 ~~W~~~~~~p~~~r~~~~~~~~~g~lyv~gG~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~------~~~ly~~g~~ 228 (317)
.+|+.+..+|.. ...-..-..+..++.+| ....+++=.=.-.+|+.+....+ ..... + .+.+|+...+
T Consensus 578 ~tW~~~~~l~~~-~~~i~~d~~~~~~~y~g-~~g~v~~S~DgG~tW~~~~~~lp~~~~~~~~-i~~~~~~~~~l~~~~~~ 654 (763)
T 3a0f_A 578 KTWTAPSGLSKQ-TTGIAADRVQANTFYVY-VEGDFFVSTDGGKSYTKKGNGLPCCWTYTGT-PVTSNLRAGELWVSVKG 654 (763)
T ss_dssp SCCBCCBSCCCC-CSCEEECSSSTTCEEEE-ETTEEEEESSTTSBCEEECBTSCCSSCCCEE-EEECSSSTTCEEEEETT
T ss_pred CCCeecCCCCCC-cceEEEeccCCCEEEEE-cCCCEEEEeCCCcCccccccCCCcccCcccc-EEECCCCCCcEEEEcCC
Q ss_pred -EEEEecCCc--eEEEeccccccccc----cEEEEEECC---eEEEEe--CcccCCCCceecccCcceeEeecCCCCCce
Q 021080 229 -LIIKQHRDV--RKVVASASEFRRRI----GFAMIGMGD---DIYVIG--GVIGPDRWNWDIKPMSDVDVLTVGAERPTW 296 (317)
Q Consensus 229 -~~~~yd~~~--W~~v~~~~~~~~r~----~~~~~~~~~---~lyv~G--G~~~~~~~~~~~~~~~~v~~yd~~~~~~~W 296 (317)
.++.-+-.. |+++..++ .... .++.+..+. .||++| -..... .|++-+-... +|
T Consensus 655 ~~l~~S~D~G~tW~~~~~~~--~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~~~----------gl~~S~D~G~--tW 720 (763)
T 3a0f_A 655 VGIYHSTDFGNTFTALAGSG--SSLNPAVFSIGAPQTPNATETLFLWGIPSASQPE----------GLYMSTDNGG--LW 720 (763)
T ss_dssp TEEEEESSTTSBCEECTTBT--TTBEEEEEEEECCSSTTSSCEEEEEEECSTTSCS----------EEEEESSTTS--CC
T ss_pred CeEEEEcCCCCCceEccCCC--cccccceeEEeeecCCCCCceEEEEEEcccCCCc----------EEEEeCCCCC--Cc
Q ss_pred eec
Q 021080 297 RQV 299 (317)
Q Consensus 297 ~~~ 299 (317)
+++
T Consensus 721 ~~~ 723 (763)
T 3a0f_A 721 TRL 723 (763)
T ss_dssp EEC
T ss_pred Eec
No 309
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.54 E-value=3.5e+02 Score=22.49 Aligned_cols=48 Identities=10% Similarity=-0.003 Sum_probs=30.3
Q ss_pred cCeEEEEeC--cEEEEecC-Cc-eEEEeccccccccccEEEEE-ECCeEEEEeCc
Q 021080 219 HDSVYLMSH--GLIIKQHR-DV-RKVVASASEFRRRIGFAMIG-MGDDIYVIGGV 268 (317)
Q Consensus 219 ~~~ly~~g~--~~~~~yd~-~~-W~~v~~~~~~~~r~~~~~~~-~~~~lyv~GG~ 268 (317)
+|.||+... +.|..||+ +. ...+...+. ...-.+++. -+++||+....
T Consensus 258 ~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~--~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 258 DHNIYVGDLAHSAIGVITSADRAYKLLVTDEK--LSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp TCCEEEEEGGGTEEEEEETTTTEEEEEEECGG--GSCEEEEEECTTSCEEEEECC
T ss_pred CCCEEEEccCCCeEEEEECCCCCEEEEEECCc--eecCCeeEECCCCcEEEEeCc
Confidence 678999874 78999998 43 666655441 122223333 26789998753
No 310
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=21.08 E-value=5.1e+02 Score=24.20 Aligned_cols=91 Identities=7% Similarity=-0.082 Sum_probs=50.4
Q ss_pred ceeEEEEeCCC------C--cEEeccCCccCC--cEEEEcCeEEEEeC-----cEEEEecCCc-----eEEEeccccccc
Q 021080 190 LSTVQVLDHMG------L--GWTVEDYGWLQG--PMAIVHDSVYLMSH-----GLIIKQHRDV-----RKVVASASEFRR 249 (317)
Q Consensus 190 ~~~v~~yd~~~------~--~W~~~~~~~~~~--~~~~~~~~ly~~g~-----~~~~~yd~~~-----W~~v~~~~~~~~ 249 (317)
.+.++.+|..+ . .+..+....... ....-++.+|+... ..++.+|.+. |+.+..... .
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~ 335 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE--K 335 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS--S
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC--C
Confidence 56788899875 3 576665432211 12223567777754 3688887543 887754331 1
Q ss_pred cccEEEEEE-CCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 250 RIGFAMIGM-GDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 250 r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..-..+... ++++++....+.. ..++++|+.++
T Consensus 336 ~~~~~~~~~~~~~lv~~~~~~g~----------~~l~~~~~~~g 369 (710)
T 2xdw_A 336 DVLEWVACVRSNFLVLCYLHDVK----------NTLQLHDLATG 369 (710)
T ss_dssp CEEEEEEEETTTEEEEEEEETTE----------EEEEEEETTTC
T ss_pred CeEEEEEEEcCCEEEEEEEECCE----------EEEEEEECCCC
Confidence 111223344 6777776553322 36778887554
No 311
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=20.91 E-value=5.1e+02 Score=24.11 Aligned_cols=185 Identities=10% Similarity=-0.080 Sum_probs=0.0
Q ss_pred CcCceEEEEEeCCCCceEEEeCCCC---CEeecCCCCccccccCCeeEEEeCCEEEEEcCcCCCCCCCCCCCCCcccccc
Q 021080 53 SSENLLCVCAFDPENLWQLYDPLRD---LWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGDQDGSFATNE 129 (317)
Q Consensus 53 ~~~~~l~v~gg~~~~~~~~yd~~~~---~W~~~~~~p~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 129 (317)
..+...++++.. ..++.+|..++ +-..+..... ........-+++.++++..
T Consensus 117 SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~----~~~~~~~SPDG~~la~~~~------------------- 171 (741)
T 2ecf_A 117 SPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEG----FATDAKLSPKGGFVSFIRG------------------- 171 (741)
T ss_dssp CTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSS----CEEEEEECTTSSEEEEEET-------------------
T ss_pred CCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCc----ccccccCCCCCCEEEEEeC-------------------
Q ss_pred eeEecccCCCCCCCcCCCceeEEeeCCCCceeeCCCCCccCCC----------------ceEEEEECCEEEEEecCce--
Q 021080 130 VWSYDPVTRGFTSCRKSISQAEMYDPEKDVWVPIPDLHRTHNS----------------ACTGVVIGGKVHVLHKGLS-- 191 (317)
Q Consensus 130 ~~~~d~~~~G~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~~r~----------------~~~~~~~~g~lyv~gG~~~-- 191 (317)
..++++|..+++...+...... .. ...+..-||+..+++....
T Consensus 172 ------------------~~i~~~d~~~g~~~~~~~~~~~-~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~ 232 (741)
T 2ecf_A 172 ------------------RNLWVIDLASGRQMQLTADGST-TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESP 232 (741)
T ss_dssp ------------------TEEEEEETTTTEEEECCCCCCS-SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTT
T ss_pred ------------------CcEEEEecCCCCEEEeccCCcc-ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCC
Q ss_pred -------------------------------eEEEEeCCC-CcEEeccCCcc-----CCcEEEEcCeEEEEeC-------
Q 021080 192 -------------------------------TVQVLDHMG-LGWTVEDYGWL-----QGPMAIVHDSVYLMSH------- 227 (317)
Q Consensus 192 -------------------------------~v~~yd~~~-~~W~~~~~~~~-----~~~~~~~~~~ly~~g~------- 227 (317)
.+..+|..+ ++-..+..... ....- -+|+..++..
T Consensus 233 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~ 311 (741)
T 2ecf_A 233 VPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKK 311 (741)
T ss_dssp SCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSE
T ss_pred CceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCe
Q ss_pred cEEEEecCCceEEEeccccccc----cccEEEEEECCeEEEEeCcccCCCCceecccCcceeEeecCCC
Q 021080 228 GLIIKQHRDVRKVVASASEFRR----RIGFAMIGMGDDIYVIGGVIGPDRWNWDIKPMSDVDVLTVGAE 292 (317)
Q Consensus 228 ~~~~~yd~~~W~~v~~~~~~~~----r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 292 (317)
..++.+|.++.+.......... ........-+|++++.+..++.. .++.+|.+..
T Consensus 312 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~----------~l~~~~~~~~ 370 (741)
T 2ecf_A 312 LDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQ----------HLYRIDSKGK 370 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSC----------EEEEECSSSC
T ss_pred EEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCcc----------EEEEEcCCCC
No 312
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=20.85 E-value=84 Score=23.14 Aligned_cols=27 Identities=11% Similarity=0.322 Sum_probs=21.0
Q ss_pred eeEEEEeCCCCcEEeccCCccCCcEEEEcCeEEEEeC
Q 021080 191 STVQVLDHMGLGWTVEDYGWLQGPMAIVHDSVYLMSH 227 (317)
Q Consensus 191 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ly~~g~ 227 (317)
-.++.||..+++|.+.. +.|.+|++.-
T Consensus 38 v~vY~f~~~~~~W~K~~----------iEG~LFv~~R 64 (134)
T 2lyd_A 38 VAFYTFNSSQNEWEKTD----------VEGAFFIYHR 64 (134)
T ss_dssp EEEEEEETTTTEEEEEE----------EEEEEEEEEC
T ss_pred EEEEEecCCcCceeEcC----------CcceEEEEEc
Confidence 45888999999999875 5677777753
Done!