BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021081
(317 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 230 bits (587), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 178/296 (60%), Gaps = 48/296 (16%)
Query: 31 PWWSSLGSQ-----SVYGASCGQLKPLSMETSTEEAGQTLDKPSTTHFSFFPGDVKSSGD 85
PWW++ GSQ S+ G + + T+ E G + STT F+F PG KSS D
Sbjct: 13 PWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQTSTTLFTFSPGGEKSSRD 72
Query: 86 GQKLPPAISLQSALPENPGCFELGFGQPMICAKYPYADQYYGVFSAYGAQ-ISGRIMLPL 144
K A ++QSA CFE GF QPM+ K+P+ +QYYGV SAYG+Q SGR+M+PL
Sbjct: 73 VPKPHVAFAMQSA------CFEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRSSGRVMIPL 126
Query: 145 NLATD-DGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCG 203
+ T+ DG IYVN+KQYHGIIRRR+SRAKA K++R RKPYMHHSRHLHAMRRPRG G
Sbjct: 127 KMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHAMRRPRGSG 183
Query: 204 GRFLNTKTRDGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGS 263
GRFLNTKT D + ++ +P+ SQSSEV E+ T++S +E N S NLS S
Sbjct: 184 GRFLNTKTADAAKQS-----------KPSNSQSSEVFHPENETINSSREANES--NLSDS 230
Query: 264 EVTSMYSRGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAADN--CCNLKV 317
VTSM +F S + G+VMP +W AAA + CC L +
Sbjct: 231 AVTSM------DYF-----------LSSSAYSPGGMVMPIKWNAAAMDIGCCKLNI 269
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 220 bits (561), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 198/351 (56%), Gaps = 90/351 (25%)
Query: 1 MAMQTVYFKEHHEGNGHNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETSTE- 59
MAMQTV + G S+ +S WW++ GSQ L P S+ ++
Sbjct: 1 MAMQTV------------REGLFSAPQTS--WWTAFGSQP--------LAPESLAGDSDS 38
Query: 60 ----------EAGQTLDKPS--TTHFSFFPGDVKSSGDGQKLPP-----AISLQSALPEN 102
E GQ +DK S TH +F GDVKS +L P S+QS
Sbjct: 39 FAGVKVGSVGETGQRVDKQSNSATHLAFSLGDVKSP----RLVPKPHGATFSMQSP---- 90
Query: 103 PGCFELGFGQPMICAKYPYADQ-YYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYH 161
C ELGF QP I KYPY +Q YYGV SAYG+Q R+MLPLN+ T+D IYVN+KQYH
Sbjct: 91 --CLELGFSQPPIYTKYPYGEQQYYGVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYH 146
Query: 162 GIIRRRKSRAKA--VLENKI--TRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTR--DGS 215
GIIRRR+SRAKA VL+ K +R RKPYMHHSRHLHA+RRPRG GGRFLNTK++ + S
Sbjct: 147 GIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENS 206
Query: 216 GRTEEKKTCIQQLL-----QPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYS 270
G +K Q+ Q + SQ+SEV+ E+GT++ +G N+SGSEVTSM
Sbjct: 207 GTNAKKGDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNL-----SNGLNVSGSEVTSM-- 259
Query: 271 RGEFGHFRINHLGPPVHSFSGIMDTGRGIVMPSQWVAAA---DN-CCNLKV 317
+F L PVHS G+VMPS+W+AAA DN CCN K
Sbjct: 260 ----NYF----LSSPVHSLG-------GMVMPSKWIAAAAAMDNGCCNFKT 295
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 96/163 (58%), Gaps = 24/163 (14%)
Query: 110 FGQPMICAKYPYADQYY-GVFS--AY------GAQISGRIM----LPLNLATDDGPIYVN 156
+ +PM YPY D YY VF+ AY G Q+ M +PL + P++VN
Sbjct: 44 YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVN 103
Query: 157 AKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSG 216
AKQYHGI+RRR+SRAK N+ + +KPYMH SRHLHA+RRPRGCGGRFLN K +G
Sbjct: 104 AKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDH 163
Query: 217 RTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPN 259
+ EE+ T + S++S L+SE +++ SGPN
Sbjct: 164 KEEEEATSDE-----NTSEASSSLRSEKLAMAT------SGPN 195
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 87/156 (55%), Gaps = 25/156 (16%)
Query: 110 FGQPMICAKYPYADQYYG-VFSAYGAQISG----------RIMLPLNLATDDGPIYVNAK 158
G + C PY D YYG + AYG Q G R LPL++A + P+YVNAK
Sbjct: 122 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE--PVYVNAK 179
Query: 159 QYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKT----RDG 214
QY GI+RRRK+RAKA LE K+ R RKPY+H SRH HAMRR R GGRF D
Sbjct: 180 QYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDA 239
Query: 215 SGRTEEKKTCIQQLLQPTGSQSSEVLQSESG-TLSS 249
GR E+ + T S SE ++++S TL+S
Sbjct: 240 GGRDRERGSA-------TNSSGSEQVETDSNETLNS 268
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 149/315 (47%), Gaps = 57/315 (18%)
Query: 20 NGQLSSVHSSAPW------WSSLGSQSVYG----ASCGQLK----PLSMETSTEEAGQTL 65
N + S+ HS+ P+ W + + SV A LK P ++T+ + + Q
Sbjct: 7 NKKDSATHSTLPYLNTSISWGVVPTDSVANRRGSAESLSLKVDSRPGHIQTTKQISFQDQ 66
Query: 66 DKPSTTHFSFFPGDVKSSGDGQ---------KLPPAISLQSALPENP------GCFELGF 110
D ST +V SSGD K I+ + NP G + F
Sbjct: 67 DSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFASNPKQGSMTGFPNIHF 126
Query: 111 GQPMICAKYPYADQYYG--VFSAYGAQ-----------ISGRIMLPLNLATDDGPIYVNA 157
+ YAD +YG + + Y Q I GR+ LP L T+ P++VNA
Sbjct: 127 APAQANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAEL-TETDPVFVNA 185
Query: 158 KQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTK-----TR 212
KQYH I+RRR+ RAK +NK+ R RKPY+H SRH+HA++RPRG GGRFLNTK +
Sbjct: 186 KQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESE 245
Query: 213 DGSGRTEEKKTCIQQLLQPTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRG 272
+ R +E+ QQ+ ++ + + + E+ L + K+ + + SGS++TS+
Sbjct: 246 QAAAREQEQDKLGQQV-----NRKTNMSRFEAHMLQNNKDRSST---TSGSDITSVSDGA 297
Query: 273 E-FGHFRINHLGPPV 286
+ FGH G P
Sbjct: 298 DIFGHTEFQFSGFPT 312
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 10/110 (9%)
Query: 114 MICAKYPYADQYY-GVFSAYGAQISG---RIM------LPLNLATDDGPIYVNAKQYHGI 163
M +YPY D YY +F+ +G ++M +PL + P++VNAKQYHGI
Sbjct: 53 MAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGI 112
Query: 164 IRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRD 213
+RRR+SRA+ +NK+ + RKPY+H SRHLHA+RRPRGCGGRFLN K D
Sbjct: 113 LRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 162
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 13/130 (10%)
Query: 120 PYADQYY-GVFSAYGAQISG----------RIMLPLNLATDDGPIYVNAKQYHGIIRRRK 168
PY D YY GV AYG G R+ LP +A + P++VNAKQY I+RRR+
Sbjct: 126 PYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE--PVFVNAKQYQAILRRRQ 183
Query: 169 SRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQL 228
+RAKA LE K+ + RKPY+H SRH HAMRRPRG GGRF + S R E+K+
Sbjct: 184 ARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVT 243
Query: 229 LQPTGSQSSE 238
P+ S S +
Sbjct: 244 QSPSSSNSDQ 253
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 119 YPYADQYYGVF--SAYGAQIS------GRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSR 170
+ YAD ++G +AY Q + R+ LP +L ++ P++VNAKQ+H I+RRR+ R
Sbjct: 133 FHYADPHFGGLMPAAYLPQATIWNPQMTRVPLPFDLIENE-PVFVNAKQFHAIMRRRQQR 191
Query: 171 AKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSGRTEEKKTCIQQLLQ 230
AK +NK+ + RKPY+H SRH+HA++RPRG GGRFLNTK S T+ K+ Q
Sbjct: 192 AKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES--TDPKQDMPIQQQH 249
Query: 231 PTGSQSSEVLQSESGTLSSPKETNGSGPNLSGSEVTSMYSRGEF 274
TG+ S VL + T S S+ +++ EF
Sbjct: 250 ATGNMSRFVLYQLQNSNDCDCSTTSRSDITSASDSVNLFGHSEF 293
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 136 ISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHA 195
+S R+ LP ++ ++ PI+VNAKQYH I+RRRK RAK +NK+ + RKPY+H SRHLHA
Sbjct: 164 VSSRVPLPHHIQENE-PIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHA 222
Query: 196 MRRPRGCGGRFLNTK 210
++R RG GGRFLNTK
Sbjct: 223 LKRARGSGGRFLNTK 237
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 119 YPYADQYYGVFSAYGAQISGRIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENK 178
+PYA Q+ + R+ LP N+ ++ PI+VNAKQY I+RRR+ RAK +NK
Sbjct: 140 FPYASQHTVQHPQIRGLVPSRMPLPHNIPENE-PIFVNAKQYQAILRRRERRAKLEAQNK 198
Query: 179 ITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKTRDGSG 216
+ + RKPY+H SRHLHA++R RG GGRFLNTK S
Sbjct: 199 LIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESN 236
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%)
Query: 152 PIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFLNTKT 211
P YVNAKQY+ I++RR +RAK KI+R+R+PY+H SRH HAMRRPRG GGRFL
Sbjct: 186 PFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFLTAAE 245
Query: 212 RDGSGRTEEKKTCIQQLLQ 230
R EE+ T LQ
Sbjct: 246 MAEMKRKEEEGTDNDSFLQ 264
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 139 RIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRR 198
RI LP ++ P+YVNAKQYH I++RR++RAK E KI ++R+ Y+H SRH HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 199 PRGCGGRFLNTKTRD 213
RG GGRF + K +D
Sbjct: 305 KRGEGGRFFSPKEKD 319
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 139 RIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRR 198
RI LP ++ P+YVNAKQYH I++RR++RAK E KI ++R+ Y+H SRH HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 199 PRGCGGRFLNTKTRD 213
RG GGRF + K +D
Sbjct: 305 KRGEGGRFFSPKEKD 319
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 139 RIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRR 198
RI LP ++ P+YVNAKQYH I++RR++RAK E KI ++R+ Y+H SRH HAM R
Sbjct: 250 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 309
Query: 199 PRGCGGRFLNTKTRD 213
RG GGRF + K +D
Sbjct: 310 KRGEGGRFFSPKEKD 324
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 139 RIMLPLNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRR 198
RI LP ++ P+YVNAKQYH I++RR++RAK E KI ++R+ Y+H SRH HAM R
Sbjct: 251 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 310
Query: 199 PRGCGGRFLNTKTRD 213
RG GGRF + K +D
Sbjct: 311 KRGEGGRFFSPKEKD 325
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%)
Query: 144 LNLATDDGPIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCG 203
L A + P YVNAKQY+ I++RR +RAK + +I+R+RKPY+H SRH HAMRRPRG G
Sbjct: 152 LGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEG 211
Query: 204 GRFL 207
GRFL
Sbjct: 212 GRFL 215
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 44/56 (78%)
Query: 152 PIYVNAKQYHGIIRRRKSRAKAVLENKITRKRKPYMHHSRHLHAMRRPRGCGGRFL 207
P+YVNAKQY+ I++RR +RAK ENK+ + RK Y H SRH HA+RR RGCGGRFL
Sbjct: 230 PLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQRGCGGRFL 285
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 5/58 (8%)
Query: 153 IYVNAKQYHGIIRRRKSRAKAVLENK---ITRKRKPYMHHSRHLHAMRRPRGCGGRFL 207
+YVNAKQYH I++RR++RAK LE + + +KPY+H SRH HAMRRPRG GGRFL
Sbjct: 10 LYVNAKQYHRILKRREARAK--LEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFL 65
>sp|A2BXM8|Y1332_PROM5 PKHD-type hydroxylase P9515_13321 OS=Prochlorococcus marinus
(strain MIT 9515) GN=P9515_13321 PE=3 SV=2
Length = 221
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 17 HNQNGQLSSVHSSAPWWSSLGSQSVYGASCGQLKPLSMETSTE-EAGQTLDKPSTTHFSF 75
H N +SS S + SL +++ Y ++ L+ E + +AG+ + PST
Sbjct: 98 HIDNPFMSSGRSDLSFTISLTNKADYQGGELVIETLNSEKKLKLDAGEIIIYPST----- 152
Query: 76 FPGDVKSSGDGQKLPPAISLQS---ALPENPGCFELGFGQPMICAKYPYADQYYGVFSAY 132
+ VK +G++L ++S ++ E F+L G + AKY +D+ +F +Y
Sbjct: 153 YLHSVKKVKNGERLVCVGWIESYVKSIEEREYLFDLDAGAKGLLAKYGRSDELDNIFKSY 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,033,234
Number of Sequences: 539616
Number of extensions: 5515000
Number of successful extensions: 12470
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 12428
Number of HSP's gapped (non-prelim): 38
length of query: 317
length of database: 191,569,459
effective HSP length: 117
effective length of query: 200
effective length of database: 128,434,387
effective search space: 25686877400
effective search space used: 25686877400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)