BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021084
(317 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G++G VY G + A+KE+ +D + L +EI+L +H NIVQY
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQY 84
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQ--VSAYTWQILNGLKYLHEQNVI 312
G+ + + IF+E V GSL+ + + LKD++ + YT QIL GLKYLH+ ++
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 313 HR 314
HR
Sbjct: 145 HR 146
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G++G VY G + A+KE+ +D + L +EI+L +H NIVQY
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQY 70
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQ--VSAYTWQILNGLKYLHEQNVI 312
G+ + + IF+E V GSL+ + + LKD++ + YT QIL GLKYLH+ ++
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 313 HR 314
HR
Sbjct: 131 HR 132
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 178 NFSLNEKYRRR--IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV 235
N +L E +R+ I + G PLG G FG+VY F +V + Q + E
Sbjct: 1 NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVE 59
Query: 236 LQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA- 294
QL +EI + H NI++ + D ++Y+ LE +G L K Q++ D Q SA
Sbjct: 60 HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 119
Query: 295 YTWQILNGLKYLHEQNVIHR 314
+ ++ + L Y HE+ VIHR
Sbjct: 120 FMEELADALHYCHERKVIHR 139
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G PLG G FG+VY F +V + Q + E QL +EI + H NI+
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNIL 77
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQNVIH 313
+ + D ++Y+ LE +G L K Q++ D Q SA + ++ + L Y HE+ VIH
Sbjct: 78 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 314 R 314
R
Sbjct: 138 R 138
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 197 PLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
PLG G FG+VY F +V + Q + E QL +EI + H NI++
Sbjct: 21 PLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQNVIHR 314
+ D ++Y+ LE +G L K Q++ D Q SA + ++ + L Y HE+ VIHR
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 138
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
W+ LG G+FG VY+ + A +V T+ E+ + EI +L +H
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDHP 94
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ EN L+I +E G++ + E L +SQ+ Q L+ L YLH+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 310 NVIHR 314
+IHR
Sbjct: 155 KIIHR 159
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
W+ LG G+FG VY+ + A +V T+ E+ + EI +L +H
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDHP 94
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ EN L+I +E G++ + E L +SQ+ Q L+ L YLH+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 310 NVIHR 314
+IHR
Sbjct: 155 KIIHR 159
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
W+ LG G+FG VY+ + A +V T+ E+ + EI +L +H
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDHP 94
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ EN L+I +E G++ + E L +SQ+ Q L+ L YLH+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 310 NVIHR 314
+IHR
Sbjct: 155 KIIHR 159
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 72
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE +G + K Q+ D Q +A Y ++ N L Y H +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 310 NVIHR 314
VIHR
Sbjct: 133 RVIHR 137
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 72
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE +G + K Q+ D Q +A Y ++ N L Y H +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 310 NVIHR 314
VIHR
Sbjct: 133 RVIHR 137
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY + F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 KVIHR 132
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 182 NEKYRRR---IMSWQKGAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQS 234
NE+ ++R + ++ G PLG G FG+VY F A+K + L+ G +
Sbjct: 23 NEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--- 79
Query: 235 VLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA 294
QL +E+ + H NI++ +G D ++Y+ LE G++ + Q+ D Q +A
Sbjct: 80 --QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 295 -YTWQILNGLKYLHEQNVIHR 314
Y ++ N L Y H + VIHR
Sbjct: 138 TYITELANALSYCHSKRVIHR 158
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 182 NEKYRRR---IMSWQKGAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQS 234
NE+ ++R + ++ G PLG G FG+VY F A+K + L+ G +
Sbjct: 14 NEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--- 70
Query: 235 VLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA 294
QL +E+ + H NI++ +G D ++Y+ LE G++ + Q+ D Q +A
Sbjct: 71 --QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 295 -YTWQILNGLKYLHEQNVIHR 314
Y ++ N L Y H + VIHR
Sbjct: 129 TYITELANALSYCHSKRVIHR 149
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 182 NEKYRRR---IMSWQKGAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQS 234
NE+ ++R + ++ G PLG G FG+VY F A+K + L+ G +
Sbjct: 23 NEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--- 79
Query: 235 VLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA 294
QL +E+ + H NI++ +G D ++Y+ LE G++ + Q+ D Q +A
Sbjct: 80 --QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 295 -YTWQILNGLKYLHEQNVIHR 314
Y ++ N L Y H + VIHR
Sbjct: 138 TYITELANALSYCHSKRVIHR 158
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 13/125 (10%)
Query: 198 LGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG+G++ +VY+G G + A+KEV L + ++ +EISL+ + +H+NIV+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI----REISLMKELKHENIVRL 68
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQ-------VSAYTWQILNGLKYLHEQ 309
+ ENKL + E + L K + ++ V + WQ+L GL + HE
Sbjct: 69 YDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 310 NVIHR 314
++HR
Sbjct: 128 KILHR 132
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 310 NVIHR 314
VIHR
Sbjct: 131 RVIHR 135
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 68
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 310 NVIHR 314
VIHR
Sbjct: 129 RVIHR 133
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 68
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 310 NVIHR 314
VIHR
Sbjct: 129 RVIHR 133
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 69
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 310 NVIHR 314
VIHR
Sbjct: 130 RVIHR 134
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 69
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 310 NVIHR 314
VIHR
Sbjct: 130 RVIHR 134
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 310 NVIHR 314
VIHR
Sbjct: 131 RVIHR 135
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 72
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 310 NVIHR 314
VIHR
Sbjct: 133 RVIHR 137
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 310 NVIHR 314
VIHR
Sbjct: 131 RVIHR 135
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 310 NVIHR 314
VIHR
Sbjct: 131 RVIHR 135
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVL--QLEQEISLLGQFEHDN 252
G PLG G FG+VY F +V + TQ E++ + QL +E+ + H N
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFK---TQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQNV 311
I++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H + V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 312 IHR 314
IHR
Sbjct: 134 IHR 136
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 72
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 310 NVIHR 314
VIHR
Sbjct: 133 RVIHR 137
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 66
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 310 NVIHR 314
VIHR
Sbjct: 127 RVIHR 131
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVL--QLEQEISLLGQFEHDN 252
G PLG G FG+VY F +V + TQ E++ + QL +E+ + H N
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFK---TQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQNV 311
I++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H + V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 312 IHR 314
IHR
Sbjct: 134 IHR 136
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 68
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 310 NVIHR 314
VIHR
Sbjct: 129 RVIHR 133
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 310 NVIHR 314
VIHR
Sbjct: 131 RVIHR 135
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 72
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 310 NVIHR 314
VIHR
Sbjct: 133 RVIHR 137
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 310 NVIHR 314
VIHR
Sbjct: 128 RVIHR 132
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 71
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 310 NVIHR 314
VIHR
Sbjct: 132 RVIHR 136
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDDG-FFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 310 NVIHR 314
VIHR
Sbjct: 131 RVIHR 135
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGF-FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG VY+G + A+K + L++ E + ++QEI++L Q + I +Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYITRY 82
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
FG+ KL+I +E + GS + + L+++ ++ +IL GL YLH + IHR
Sbjct: 83 FGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 195 GAPLGSGSFGSVYEGFTDD-GFFFAVK---EVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G PLG G FG+VY F A+K + L+ G + QL +E+ + H
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEH-----QLRREVEIQSHLRH 64
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
NI++ +G D ++Y+ LE G++ + Q+ D Q +A Y ++ N L Y H +
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 310 NVIHR 314
VIHR
Sbjct: 125 RVIHR 129
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G PLG G FG+VY F +V + Q + E QL +EI + H NI+
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ-IEKEGVEHQLRREIEIQAHLHHPNIL 86
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW-QILNGLKYLHEQNVIH 313
+ + D ++Y+ LE +G L K Q+ D Q +A ++ + L Y H + VIH
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIH 146
Query: 314 R 314
R
Sbjct: 147 R 147
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V++G + A+K + L++ E + ++QEI++L Q + + +Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+G+ + KL+I +E + GS + + L ++Q++ +IL GL YLH + IHR
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 21/133 (15%)
Query: 197 PLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
PLG G G V+ +D A+K++ L D QSV +EI ++ + +HDNIV+
Sbjct: 18 PLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVK 72
Query: 256 YF--------------GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
F G+ + N +YI E + + LA + ++ L + + +Q+L
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEHARLFMYQLLR 131
Query: 302 GLKYLHEQNVIHR 314
GLKY+H NV+HR
Sbjct: 132 GLKYIHSANVLHR 144
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V++G + A+K + L++ E + ++QEI++L Q + + +Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+G+ + KL+I +E + GS + + L ++Q++ +IL GL YLH + IHR
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 174 ELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSL--QDQGTQG 231
E +Y L EKY QK +G G++G VY+ G A+K + L +D+G
Sbjct: 12 ENLYFQGLMEKY-------QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPS 64
Query: 232 EQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKD 289
+EISLL + H NIV E L + E + + L K+ E L+D
Sbjct: 65 TAI-----REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQD 118
Query: 290 SQVSAYTWQILNGLKYLHEQNVIHR 314
SQ+ Y +Q+L G+ + H+ ++HR
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHR 143
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V++G + A+K + L++ E + ++QEI++L Q + + +Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+G+ + KL+I +E + GS + + L ++Q++ +IL GL YLH + IHR
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 174 ELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSL--QDQGTQG 231
E +Y L EKY QK +G G++G VY+ G A+K + L +D+G
Sbjct: 12 ENLYFQGLMEKY-------QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPS 64
Query: 232 EQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKD 289
+EISLL + H NIV E L + E + + L K+ E L+D
Sbjct: 65 TAI-----REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQD 118
Query: 290 SQVSAYTWQILNGLKYLHEQNVIHR 314
SQ+ Y +Q+L G+ + H+ ++HR
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHR 143
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 64
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 124 HSHRVLHR 131
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q AP+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 87
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 88 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 146
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 147 GLKYIHSADIIHR 159
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V++G + A+K + L++ E + ++QEI++L Q + + +Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+G+ + KL+I +E + GS + + L ++Q++ +IL GL YLH + IHR
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 148
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 59
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 119 HSHRVLHR 126
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 59
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 119 HSHRVLHR 126
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 61
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 121 HSHRVLHR 128
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 59
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 119 HSHRVLHR 126
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 63
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 123 HSHRVLHR 130
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 62
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 122 HSHRVLHR 129
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 59
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 119 HSHRVLHR 126
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 61
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 121 HSHRVLHR 128
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 62
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 122 HSHRVLHR 129
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 61
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 121 HSHRVLHR 128
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 63
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E V Q L K L + +Y +Q+L GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 123 HSHRVLHR 130
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 67
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 127 HSHRVLHR 134
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 63
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 123 HSHRVLHR 130
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 64
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 124 HSHRVLHR 131
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 62
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 122 HSHRVLHR 129
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 84
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 144 GLKYIHSADIIHR 156
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 74
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 134 GLKYIHSADIIHR 146
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 61
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 121 HSHRVLHR 128
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 82
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 142 GLKYIHSADIIHR 154
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 84
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 144 GLKYIHSADIIHR 156
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 84
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 144 GLKYIHSADIIHR 156
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 67
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 127 HSHRVLHR 134
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 73
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 133 GLKYIHSADIIHR 145
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 74
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 75 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 134 GLKYIHSADIIHR 146
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 84
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 144 GLKYIHSADIIHR 156
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 82
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 142 GLKYIHSADIIHR 154
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 82
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 142 GLKYIHSADIIHR 154
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 76
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 77 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 135
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 136 GLKYIHSADIIHR 148
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------KPFQSIIHAKRTYRELRLLKH 89
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 149 GLKYIHSADIIHR 161
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 75
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 76 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 134
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 135 GLKYIHSADIIHR 147
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 63
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E ++ L K L + +Y +Q+L GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 123 HSHRVLHR 130
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 96
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 155
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 156 GLKYIHSADIIHR 168
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 89
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 149 GLKYIHSADIIHR 161
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 88
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 147
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 148 GLKYIHSADIIHR 160
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 79
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 139 GLKYIHSADIIHR 151
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 89
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 90 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 149 GLKYIHSADIIHR 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 79
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 139 GLKYIHSADIIHR 151
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 83
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 143 GLKYIHSADIIHR 155
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 97
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 157 GLKYIHSADIIHR 169
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 82
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 83 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 142 GLKYIHSADIIHR 154
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 79
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 139 GLKYIHSADIIHR 151
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 100
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 160 GLKYIHSADIIHR 172
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 61
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E ++ L K L + +Y +Q+L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 121 HSHRVLHR 128
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 83
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 143 GLKYIHSADIIHR 155
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 73
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCAKLTDDHVQFLIYQILR 132
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 133 GLKYIHSADIIHR 145
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 100
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 160 GLKYIHSADIIHR 172
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 88
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 89 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 147
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 148 GLKYIHSADIIHR 160
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG GS+GSVY+ + G A+K+V + E + ++ +EIS++ Q + ++V+Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPV-------ESDLQEIIKEISIMQQCDSPHVVKY 89
Query: 257 FGTEKDENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+G+ L+I +E GS++ I + L + +++ L GL+YLH IHR
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 83
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 143 GLKYIHSADIIHR 155
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
W+ LG G+FG VY+ + G A K + T+ E+ + EI +L +H
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEELEDYIVEIEILATCDH 75
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHE 308
IV+ G + KL+I +E G++ I E L + Q+ Q+L L +LH
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 309 QNVIHR 314
+ +IHR
Sbjct: 136 KRIIHR 141
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 79
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 80 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 139 GLKYIHSADIIHR 151
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
W+ LG G+FG VY+ + G A K + T+ E+ + EI +L +H
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEELEDYIVEIEILATCDH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHE 308
IV+ G + KL+I +E G++ I E L + Q+ Q+L L +LH
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 309 QNVIHR 314
+ +IHR
Sbjct: 128 KRIIHR 133
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 73
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 133 GLKYIHSADIIHR 145
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 73
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 133 GLKYIHSADIIHR 145
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 77
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 78 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 137 GLKYIHSADIIHR 149
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 97
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 157 GLKYIHSADIIHR 169
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 59
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQ--GSLAKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H NIV+ ENKLY+ E V Q + + + +Y +Q+L GL + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 308 EQNVIHR 314
V+HR
Sbjct: 120 SHRVLHR 126
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 97
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 98 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 157 GLKYIHSADIIHR 169
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 96
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 97 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 155
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 156 GLKYIHSADIIHR 168
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV F T G AVK++S + QS++ ++ E+ LL
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS------RPFQSIIHAKRTYRELRLLKH 83
Query: 248 FEHDNIVQYFG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ + ++ N +Y+ L+ L I + L D V +QIL
Sbjct: 84 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 143 GLKYIHSADIIHR 155
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQ 233
+VYN S + +Q + LG G++G V G A+K++ D+
Sbjct: 5 IVYNISSD---------FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-- 53
Query: 234 SVLQLEQEISLLGQFEHDNIVQYFGTEKDE-----NKLYIFLELVTQGSLAKIYQEYHLK 288
L+ +EI +L F+H+NI+ F ++ + N++YI EL+ Q L ++ L
Sbjct: 54 --LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLS 110
Query: 289 DSQVSAYTWQILNGLKYLHEQNVIHR 314
D + + +Q L +K LH NVIHR
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHR 136
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G F VY DG A+K+V + D ++ +EI LL Q H N+++Y
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFD--LMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVSAYTWQILNGLKYLHEQNV 311
+ + ++N+L I LEL G L+++ + + + + V Y Q+ + L+++H + V
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV 157
Query: 312 IHR 314
+HR
Sbjct: 158 MHR 160
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQ 233
+VYN S + +Q + LG G++G V G A+K++ D+
Sbjct: 5 IVYNISSD---------FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-- 53
Query: 234 SVLQLEQEISLLGQFEHDNIVQYFGTEKDE-----NKLYIFLELVTQGSLAKIYQEYHLK 288
L+ +EI +L F+H+NI+ F ++ + N++YI EL+ Q L ++ L
Sbjct: 54 --LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLS 110
Query: 289 DSQVSAYTWQILNGLKYLHEQNVIHR 314
D + + +Q L +K LH NVIHR
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHR 136
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQ 233
+VYN S + +Q + LG G++G V G A+K++ D+
Sbjct: 5 IVYNISSD---------FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-- 53
Query: 234 SVLQLEQEISLLGQFEHDNIVQYFGTEKDE-----NKLYIFLELVTQGSLAKIYQEYHLK 288
L+ +EI +L F+H+NI+ F ++ + N++YI EL+ Q L ++ L
Sbjct: 54 --LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLS 110
Query: 289 DSQVSAYTWQILNGLKYLHEQNVIHR 314
D + + +Q L +K LH NVIHR
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHR 136
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 63
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQ--GSLAKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H NIV+ ENKLY+ E + Q + + + +Y +Q+L GL + H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 308 EQNVIHR 314
V+HR
Sbjct: 124 SHRVLHR 130
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVS----LQDQG-----------------TQGEQSV 235
+G GS+G V + +D ++A+K +S ++ G Q +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 236 LQLEQEISLLGQFEHDNIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVS 293
Q+ QEI++L + +H N+V+ D N+ LY+ ELV QG + ++ L + Q
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y ++ G++YLH Q +IHR
Sbjct: 141 FYFQDLIKGIEYLHYQKIIHR 161
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 201 GSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE 260
G FG VY+ + A +V T+ E+ + EI +L +H NIV+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 261 KDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
EN L+I +E G++ + E L +SQ+ Q L+ L YLH+ +IHR
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+ ++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+ ++ L D T+G S +EISLL +
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL-DTETEGVPSTAI--REISLLKELN 59
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L K L + +Y +Q+L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 119 HSHRVLHR 126
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ ++H+N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 213
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++A +L L LH Q VIHR
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 60
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E + Q L L + +Y +Q+L GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 120 HSHRVLHR 127
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG FGSV++ DG +A+K G+ EQ+ L+ ++LGQ H ++V+Y
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRY 74
Query: 257 FGTEKDENKLYIFLELVTQGSLA-KIYQEY----HLKDSQVSAYTWQILNGLKYLHEQNV 311
F +++ + I E GSLA I + Y + K++++ Q+ GL+Y+H ++
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 312 IH 313
+H
Sbjct: 135 VH 136
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ ++H+N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 91
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++A +L L LH Q VIHR
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ ++H+N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 93
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++A +L L LH Q VIHR
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG FGSV++ DG +A+K G+ EQ+ L+ ++LGQ H ++V+Y
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRY 74
Query: 257 FGTEKDENKLYIFLELVTQGSLA-KIYQEY----HLKDSQVSAYTWQILNGLKYLHEQNV 311
F +++ + I E GSLA I + Y + K++++ Q+ GL+Y+H ++
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 312 IH 313
+H
Sbjct: 135 VH 136
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG FGSV++ DG +A+K G+ EQ+ L+ ++LGQ H ++V+Y
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRY 76
Query: 257 FGTEKDENKLYIFLELVTQGSLA-KIYQEY----HLKDSQVSAYTWQILNGLKYLHEQNV 311
F +++ + I E GSLA I + Y + K++++ Q+ GL+Y+H ++
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 312 IH 313
+H
Sbjct: 137 VH 138
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ ++H+N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 82
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++A +L L LH Q VIHR
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG FGSV++ DG +A+K G+ EQ+ L+ ++LGQ H ++V+Y
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRY 72
Query: 257 FGTEKDENKLYIFLELVTQGSLA-KIYQEY----HLKDSQVSAYTWQILNGLKYLHEQNV 311
F +++ + I E GSLA I + Y + K++++ Q+ GL+Y+H ++
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 312 IH 313
+H
Sbjct: 133 VH 134
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ---EISLLGQ 247
+Q +P+GSG++GSV + G AVK++S + QS++ ++ E+ LL
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS------RPFQSIIHAKRTYRELRLLKH 106
Query: 248 FEHDNIVQYF-----GTEKDE-NKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILN 301
+H+N++ T +E N +Y+ L+ L I + L D V +QIL
Sbjct: 107 MKHENVIGLLDVFTPATSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 302 GLKYLHEQNVIHR 314
GLKY+H ++IHR
Sbjct: 166 GLKYIHSADIIHR 178
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ ++H+N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 136
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++A +L L LH Q VIHR
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ ++H+N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 86
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++A +L L LH Q VIHR
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
+G GSFG+VY F D A+K++S G Q + + +E+ L + H N +
Sbjct: 23 IGHGSFGAVY--FARDVRNSEVVAIKKMSYS--GKQSNEKWQDIIKEVRFLQKLRHPNTI 78
Query: 255 QYFGTEKDENKLYIFLE--LVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
QY G E+ ++ +E L + L +++++ L++ +++A T L GL YLH N+I
Sbjct: 79 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 313 HR 314
HR
Sbjct: 138 HR 139
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
+G GSFG+VY F D A+K++S G Q + + +E+ L + H N +
Sbjct: 62 IGHGSFGAVY--FARDVRNSEVVAIKKMSYS--GKQSNEKWQDIIKEVRFLQKLRHPNTI 117
Query: 255 QYFGTEKDENKLYIFLE--LVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
QY G E+ ++ +E L + L +++++ L++ +++A T L GL YLH N+I
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 313 HR 314
HR
Sbjct: 177 HR 178
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 63
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E ++ L L + +Y +Q+L GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 123 HSHRVLHR 130
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
++QK +G G++G VY+ G A+K++ L D T+G S +EISLL +
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAI--REISLLKELN 62
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD---SQVSAYTWQILNGLKYL 306
H NIV+ ENKLY+ E ++ L L + +Y +Q+L GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 307 HEQNVIHR 314
H V+HR
Sbjct: 122 HSHRVLHR 129
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 312 IHR 314
+HR
Sbjct: 150 LHR 152
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 91
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 312 IHR 314
+HR
Sbjct: 151 LHR 153
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 86
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 312 IHR 314
+HR
Sbjct: 146 LHR 148
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 84
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 312 IHR 314
+HR
Sbjct: 144 LHR 146
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 88
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 312 IHR 314
+HR
Sbjct: 148 LHR 150
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 84
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 312 IHR 314
+HR
Sbjct: 144 LHR 146
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 86
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 312 IHR 314
+HR
Sbjct: 146 LHR 148
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 91
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 312 IHR 314
+HR
Sbjct: 151 LHR 153
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 92
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 151
Query: 312 IHR 314
+HR
Sbjct: 152 LHR 154
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 83
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 142
Query: 312 IHR 314
+HR
Sbjct: 143 LHR 145
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 312 IHR 314
+HR
Sbjct: 150 LHR 152
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 94
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 153
Query: 312 IHR 314
+HR
Sbjct: 154 LHR 156
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 86
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 312 IHR 314
+HR
Sbjct: 146 LHR 148
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 106
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 107 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 312 IHR 314
+HR
Sbjct: 166 LHR 168
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G++G VY+ + G FA+K++ L+ + + ++ EIS+L + +H NIV+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIVKLY 66
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +L + E + Q L K+ E L+ ++ Q+LNG+ Y H++ V+HR
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 86
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 312 IHR 314
+HR
Sbjct: 146 LHR 148
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 312 IHR 314
+HR
Sbjct: 150 LHR 152
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G++G VY+ + G FA+K++ L+ + + ++ EIS+L + +H NIV+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIVKLY 66
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +L + E + Q L K+ E L+ ++ Q+LNG+ Y H++ V+HR
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G++G VY+ + G FA+K++ L+ + + ++ EIS+L + +H NIV+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIVKLY 66
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +L + E + Q L K+ E L+ ++ Q+LNG+ Y H++ V+HR
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL----REIKILLRFRHENIIGI 90
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 312 IHR 314
+HR
Sbjct: 150 LHR 152
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 86
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 312 IHR 314
+HR
Sbjct: 146 LHR 148
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 75
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL + Q++ + + YT QI G++YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 309 QNVIHR 314
+ IHR
Sbjct: 136 KRYIHR 141
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L F H+NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLAFRHENIIGI 88
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 312 IHR 314
+HR
Sbjct: 148 LHR 150
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V++G + A+K + L++ E + ++QEI++L Q + + +Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+G+ +KL+I +E + GS + + + Q++ +IL GL YLH + IHR
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 312 IHR 314
+HR
Sbjct: 150 LHR 152
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L F H+NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLAFRHENIIGI 88
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 312 IHR 314
+HR
Sbjct: 148 LHR 150
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D G AVK + + G Q +QEI +L H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL----KADCGPQHRSGWKQEIDILRTLYHEH 77
Query: 253 IVQYFGTEKD--ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
I++Y G +D E L + +E V GSL + + +Q+ + QI G+ YLH Q+
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQH 137
Query: 311 VIHR 314
IHR
Sbjct: 138 YIHR 141
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ ++ AVK + G SV +E +L+ +HD +V+ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK------PGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQE---YHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + +GSL + + ++ ++ QI G+ Y+ +N IHR
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 133
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A++++S + T ++++ +EI +L +F H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 312 IHR 314
+HR
Sbjct: 150 LHR 152
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG+G+F V E T G FAVK + + +G++S +E EI++L + +H+NIV
Sbjct: 30 LGTGAFSEVVLAEEKAT--GKLFAVK--CIPKKALKGKES--SIENEIAVLRKIKHENIV 83
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ N LY+ ++LV+ G L +I ++ + S Q+L+ + YLH ++H
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 314 R 314
R
Sbjct: 144 R 144
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D G AVK + + G Q +QEI +L H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL----KADCGPQHRSGWKQEIDILRTLYHEH 77
Query: 253 IVQYFGTEKD--ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
I++Y G +D E L + +E V GSL + + +Q+ + QI G+ YLH Q+
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH 137
Query: 311 VIHR 314
IHR
Sbjct: 138 YIHR 141
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+ G+VY G A+++++LQ Q + + EI ++ + ++ NIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-----LIINEILVMRENKNPNIVNY 82
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++L++ +E + GSL + E + + Q++A + L L++LH VIHR
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+ G+VY G A+++++LQ Q + + EI ++ + ++ NIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-----LIINEILVMRENKNPNIVNY 82
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++L++ +E + GSL + E + + Q++A + L L++LH VIHR
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+ G+VY G A+++++LQ Q + + EI ++ + ++ NIV Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-----LIINEILVMRENKNPNIVNY 82
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++L++ +E + GSL + E + + Q++A + L L++LH VIHR
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+ G+VY G A+++++LQ Q + + EI ++ + ++ NIV Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-----LIINEILVMRENKNPNIVNY 83
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++L++ +E + GSL + E + + Q++A + L L++LH VIHR
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+ G+VY G A+++++LQ Q + + EI ++ + ++ NIV Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE-----LIINEILVMRENKNPNIVNY 83
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++L++ +E + GSL + E + + Q++A + L L++LH VIHR
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 95
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 156 LEENHFIHR 164
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + + + A+K++S + T ++++ +EI +L +F H+NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 106
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +Y+ L+ L K+ + HL + + + +QIL GLKY+H NV
Sbjct: 107 NDIIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 312 IHR 314
+HR
Sbjct: 166 LHR 168
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 71
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 309 QNVIHR 314
+ IHR
Sbjct: 132 KRYIHR 137
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 76
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 309 QNVIHR 314
+ IHR
Sbjct: 137 KRYIHR 142
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 96
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 157 LEENHFIHR 165
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 72
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 309 QNVIHR 314
+ IHR
Sbjct: 133 KRYIHR 138
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK++ L+ Q Q L E+ ++ + HDN+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-----QRRELLFNEVVIMRDYHHDNVVDM 107
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + ++L++ +E + G+L I + + Q++ +L L YLH Q VIHR
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 112
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 173 LEENHFIHR 181
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 87
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 148 LEENHFIHR 156
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 75
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 309 QNVIHR 314
+ IHR
Sbjct: 136 KRYIHR 141
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 78
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 309 QNVIHR 314
+ IHR
Sbjct: 139 KRYIHR 144
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 70
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 309 QNVIHR 314
+ IHR
Sbjct: 131 KRYIHR 136
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 77
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 309 QNVIHR 314
+ IHR
Sbjct: 138 KRYIHR 143
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 96
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 157 LEENHFIHR 165
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 102
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 163 LEENHFIHR 171
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 79
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 309 QNVIHR 314
+ IHR
Sbjct: 140 KRYIHR 145
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 113
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 174 LEENHFIHR 182
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ ++ AVK + G SV +E +L+ +HD +V+ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK------PGTMSVQAFLEEANLMKTLQHDKLVRLY 74
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQE---YHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + +GSL + + ++ ++ QI G+ Y+ +N IHR
Sbjct: 75 AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 134
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 72
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 309 QNVIHR 314
+ IHR
Sbjct: 133 KRYIHR 138
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 136
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 197 LEENHFIHR 205
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 20/129 (15%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 90
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEY-----HLKDSQVSAYTWQILNGLKY 305
IV+Y G L + +E + GSL Q++ H+K Q YT QI G++Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ---YTSQICKGMEY 147
Query: 306 LHEQNVIHR 314
L + IHR
Sbjct: 148 LGTKRYIHR 156
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 122
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 183 LEENHFIHR 191
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 20/129 (15%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 90
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEY-----HLKDSQVSAYTWQILNGLKY 305
IV+Y G L + +E + GSL Q++ H+K Q YT QI G++Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ---YTSQICKGMEY 147
Query: 306 LHEQNVIHR 314
L + IHR
Sbjct: 148 LGTKRYIHR 156
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLG 246
+I ++ G LG GSF VY + G A+K + + G V +++ E+ +
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAG--MVQRVQNEVKIHC 66
Query: 247 QFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLK---DSQVSAYTWQILNGL 303
Q +H +I++ + +D N +Y+ LE+ G + + Y + +K +++ + QI+ G+
Sbjct: 67 QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNR-YLKNRVKPFSENEARHFMHQIITGM 125
Query: 304 KYLHEQNVIHR 314
YLH ++HR
Sbjct: 126 LYLHSHGILHR 136
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 20/129 (15%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 103
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEY-----HLKDSQVSAYTWQILNGLKY 305
IV+Y G L + +E + GSL Q++ H+K Q YT QI G++Y
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ---YTSQICKGMEY 160
Query: 306 LHEQNVIHR 314
L + IHR
Sbjct: 161 LGTKRYIHR 169
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 72
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 309 QNVIHR 314
+ IHR
Sbjct: 133 KRYIHR 138
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 165 DDAEISLLMELVYNFSLNEKYRRRIMSWQKGAP-LGSGSFGSVYEGFTDD--GFFFAVKE 221
+D E LL E + ++ +YR + W P LG GSFG V+ D GF AVK+
Sbjct: 49 EDNEGVLLTEKLK--PVDYEYREEV-HWMTHQPRLGRGSFGEVHR-MKDKQTGFQCAVKK 104
Query: 222 VSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK- 280
V L+ V ++E+ ++ G IV +G ++ + IF+EL+ GSL +
Sbjct: 105 VRLE---------VFRVEELVACAG-LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 154
Query: 281 IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
I Q L + + Y Q L GL+YLH + ++H
Sbjct: 155 IKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 73
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQILNGLKYLHE 308
IV+Y G L + +E + GSL Q++ + + YT QI G++YL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 309 QNVIHR 314
+ IHR
Sbjct: 134 KRYIHR 139
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 95
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I +EL+ G L +E + SQ S+ I G +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 156 LEENHFIHR 164
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VYSEQDELDFLMEALIISKFNHQNI 110
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 171 LEENHFIHR 179
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 198 LGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V + D +AVK ++ + ++L+ E+ LL + +H NI+
Sbjct: 30 LGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDHPNIM 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ F +D + YI EL T G L +I + + + Q+ +G+ Y+H+ N++H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 314 R 314
R
Sbjct: 145 R 145
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD-NIVQ 255
+G+G++G VY+G G A+K + + G + E+ ++QEI++L ++ H NI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEE----IKQEINMLKKYSHHRNIAT 85
Query: 256 YFGTEKDEN------KLYIFLELVTQGSLAKIYQEYH---LKDSQVSAYTWQILNGLKYL 306
Y+G +N +L++ +E GS+ + + LK+ ++ +IL GL +L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 307 HEQNVIHR 314
H+ VIHR
Sbjct: 146 HQHKVIHR 153
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 20/129 (15%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK++ E+ + E+EI +L +HDN
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 75
Query: 253 IVQYFGT--EKDENKLYIFLELVTQGSLAKIYQEY-----HLKDSQVSAYTWQILNGLKY 305
IV+Y G L + +E + GSL Q + H+K Q YT QI G++Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ---YTSQICKGMEY 132
Query: 306 LHEQNVIHR 314
L + IHR
Sbjct: 133 LGTKRYIHR 141
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 198 LGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V + D +AVK ++ + ++L+ E+ LL + +H NI+
Sbjct: 30 LGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDHPNIM 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ F +D + YI EL T G L +I + + + Q+ +G+ Y+H+ N++H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 314 R 314
R
Sbjct: 145 R 145
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ +F H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKFNHQNI 110
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I +EL+ G L +E + SQ S+ I G +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 171 LEENHFIHR 179
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 198 LGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V + D +AVK ++ + ++L+ E+ LL + +H NI+
Sbjct: 30 LGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDHPNIM 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ F +D + YI EL T G L +I + + + Q+ +G+ Y+H+ N++H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 314 R 314
R
Sbjct: 145 R 145
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D G AVK + + G Q +QEI +L H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL----KADAGPQHRSGWKQEIDILRTLYHEH 94
Query: 253 IVQYFGTEKDEN--KLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
I++Y G +D L + +E V GSL + + +Q+ + QI G+ YLH Q+
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH 154
Query: 311 VIHR 314
IHR
Sbjct: 155 YIHR 158
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 189 IMSWQKGAPLGSGSFGSVYEGFTDDGF-FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
+ ++K +G G++G+V++ + A+K V L D S L+ EI LL +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKE 57
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKY 305
+H NIV+ + KL + E Q L K + + L V ++ +Q+L GL +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 306 LHEQNVIHR 314
H +NV+HR
Sbjct: 117 CHSRNVLHR 125
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 165 DDAEISLLMELVYNFSLNEKYRRRIMSWQKGAP-LGSGSFGSVYEGFTDD--GFFFAVKE 221
+D E LL E + ++ +YR + W P +G GSFG V+ D GF AVK+
Sbjct: 35 EDNEGVLLTEKLK--PVDYEYREEV-HWMTHQPRVGRGSFGEVHR-MKDKQTGFQCAVKK 90
Query: 222 VSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK- 280
V L+ V ++E+ ++ G IV +G ++ + IF+EL+ GSL +
Sbjct: 91 VRLE---------VFRVEELVACAG-LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 140
Query: 281 IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
I Q L + + Y Q L GL+YLH + ++H
Sbjct: 141 IKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 198 LGSGSFG-SVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG ++ T+DG + +KE+++ ++ + + +E+++L +H NIVQY
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE---ESRREVAVLANMKHPNIVQY 88
Query: 257 FGTEKDENKLYIFLELVTQGSLAK---IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++ LYI ++ G L K + ++ Q+ + QI LK++H++ ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILH 148
Query: 314 R 314
R
Sbjct: 149 R 149
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 189 IMSWQKGAPLGSGSFGSVYEGFTDDGF-FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
+ ++K +G G++G+V++ + A+K V L D S L+ EI LL +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKE 57
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKY 305
+H NIV+ + KL + E Q L K + + L V ++ +Q+L GL +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 306 LHEQNVIHR 314
H +NV+HR
Sbjct: 117 CHSRNVLHR 125
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 165 DDAEISLLMELVYNFSLNEKYRRRIMSWQKGAP-LGSGSFGSVYEGFTDD--GFFFAVKE 221
+D E LL E + ++ +YR + W P +G GSFG V+ D GF AVK+
Sbjct: 51 EDNEGVLLTEKLK--PVDYEYREEV-HWMTHQPRVGRGSFGEVHR-MKDKQTGFQCAVKK 106
Query: 222 VSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK- 280
V L+ V ++E+ ++ G IV +G ++ + IF+EL+ GSL +
Sbjct: 107 VRLE---------VFRVEELVACAG-LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 156
Query: 281 IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
I Q L + + Y Q L GL+YLH + ++H
Sbjct: 157 IKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVL--QLEQEISLLGQFEHD 251
G LGSG F V + G +A K + + Q + V ++E+E+S+L Q H
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
NI+ ++ + + LELV+ G L + Q+ L + + +++ QIL+G+ YLH +
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 311 VIH 313
+ H
Sbjct: 136 IAH 138
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G +G G FG VY+G+ ++ K ++ D T E+ Q +QEI ++ + +H+N+V
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT--EELKQQFDQEIKVMAKCQHENLV 87
Query: 255 QYFGTEKDENKLYIFLELVTQGSL----------AKIYQEYHLKDSQVSAYTWQILNGLK 304
+ G D + L + + GSL + K +Q +A NG+
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA------NGIN 141
Query: 305 YLHEQNVIHR 314
+LHE + IHR
Sbjct: 142 FLHENHHIHR 151
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G +G G FG VY+G+ ++ K ++ D T E+ Q +QEI ++ + +H+N+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT--EELKQQFDQEIKVMAKCQHENLV 93
Query: 255 QYFGTEKDENKLYIFLELVTQGSL----------AKIYQEYHLKDSQVSAYTWQILNGLK 304
+ G D + L + + GSL + K +Q +A NG+
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA------NGIN 147
Query: 305 YLHEQNVIHR 314
+LHE + IHR
Sbjct: 148 FLHENHHIHR 157
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G +G G FG VY+G+ ++ K ++ D T E+ Q +QEI ++ + +H+N+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT--EELKQQFDQEIKVMAKCQHENLV 93
Query: 255 QYFGTEKDENKLYIFLELVTQGSL----------AKIYQEYHLKDSQVSAYTWQILNGLK 304
+ G D + L + + GSL + K +Q +A NG+
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA------NGIN 147
Query: 305 YLHEQNVIHR 314
+LHE + IHR
Sbjct: 148 FLHENHHIHR 157
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V+ +D GF AVK+V L+ V + E+ ++ G IV
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLE---------VFRAEELMACAG-LTSPRIV 148
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G ++ + IF+EL+ GSL ++ +E L + + Y Q L GL+YLH + ++H
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V+ +D GF AVK+V L+ V + E+ ++ G IV
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLE---------VFRAEELMACAG-LTSPRIV 129
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G ++ + IF+EL+ GSL ++ +E L + + Y Q L GL+YLH + ++H
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 189
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQG---------EQSVLQLEQE 241
S+ K LGSG++G V +G +V + Q +G E+ ++ E
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 242 ISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQIL 300
ISLL +H NI++ F +D+ Y+ E G L +I + + + QIL
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL 156
Query: 301 NGLKYLHEQNVIHR 314
+G+ YLH+ N++HR
Sbjct: 157 SGICYLHKHNIVHR 170
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ + H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKLNHQNI 96
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 157 LEENHFIHR 165
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 26 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 80
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI +E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G FG VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 19 LGGGQFGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 73
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS-LQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
G LGSG F V + G +A K + Q + ++ S ++E+E+S+L Q H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
++ ++ + + LELV+ G L + Q+ L + + +++ QIL+G+ YLH + +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 312 IH 313
H
Sbjct: 137 AH 138
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 198 LGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FG VYEG +D V +L + EQ L E ++ + H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE--VCSEQDELDFLMEALIISKLNHQNI 110
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--------QILNGLKY 305
V+ G +I LEL+ G L +E + SQ S+ I G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 306 LHEQNVIHR 314
L E + IHR
Sbjct: 171 LEENHFIHR 179
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 22 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 76
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI +E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 19 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 73
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI +E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS-LQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
G LGSG F V + G +A K + Q + ++ S ++E+E+S+L Q H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
++ ++ + + LELV+ G L + Q+ L + + +++ QIL+G+ YLH + +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 312 IH 313
H
Sbjct: 137 AH 138
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS-LQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
G LGSG F V + G +A K + Q + ++ S ++E+E+S+L Q H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
++ ++ + + LELV+ G L + Q+ L + + +++ QIL+G+ YLH + +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 312 IH 313
H
Sbjct: 137 AH 138
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS-LQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
G LGSG F V + G +A K + Q + ++ S ++E+E+S+L Q H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
++ ++ + + LELV+ G L + Q+ L + + +++ QIL+G+ YLH + +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 312 IH 313
H
Sbjct: 137 AH 138
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 21 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 75
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI +E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 185 YRRRIMSWQKGAPLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEIS 243
Y + + ++ +G GS+G V + D G A+K+ D ++ ++ EI
Sbjct: 20 YFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR---EIK 76
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNG 302
LL Q H+N+V K + + Y+ E V L + + D QV Y +QI+NG
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIING 136
Query: 303 LKYLHEQNVIHR 314
+ + H N+IHR
Sbjct: 137 IGFCHSHNIIHR 148
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G FG V++ T G A K + T+G + +++ EIS++ Q +H N++Q
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIK-----TRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ + +N + + +E V G L I + Y+L + + QI G++++H+ ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 21 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 75
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI +E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 309 QNVIHR 314
+ +HR
Sbjct: 130 KRFVHR 135
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 309 QNVIHR 314
+ +HR
Sbjct: 130 KRFVHR 135
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG VY F G AVK + D Q++ + QE L +H NI+
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVK-AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ---NVIHR 314
G E L + +E G L ++ + + + QI G+ YLH++ +IHR
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHR 132
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS G V G AVK + L+ Q Q L E+ ++ ++H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHFNVVEM 107
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +L++ +E + G+L I + L + Q++ +L L YLH Q VIHR
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS-LQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
G LGSG F V + G +A K + Q + ++ S ++E+E+S+L Q H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
++ ++ + + LELV+ G L + Q+ L + + +++ QIL+G+ YLH + +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 312 IH 313
H
Sbjct: 137 AH 138
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFF-FAVKEVSLQD--QGTQGE 232
VY +L ++Y IMS LGSG+ G V F A+K +S + G+ E
Sbjct: 3 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 55
Query: 233 Q-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHL 287
L +E EI +L + H I++ +F D YI LEL+ G L K+ L
Sbjct: 56 ADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGNKRL 111
Query: 288 KDSQVSAYTWQILNGLKYLHEQNVIHR 314
K++ Y +Q+L ++YLHE +IHR
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHR 138
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 67
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 68 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 309 QNVIHR 314
+ +HR
Sbjct: 127 KRFVHR 132
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 72
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 73 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 131
Query: 309 QNVIHR 314
+ +HR
Sbjct: 132 KRFVHR 137
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFF-FAVKEVSLQD--QGTQGE 232
VY +L ++Y IMS LGSG+ G V F A+K +S + G+ E
Sbjct: 3 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 55
Query: 233 Q-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHL 287
L +E EI +L + H I++ +F D YI LEL+ G L K+ L
Sbjct: 56 ADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGNKRL 111
Query: 288 KDSQVSAYTWQILNGLKYLHEQNVIHR 314
K++ Y +Q+L ++YLHE +IHR
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHR 138
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D G AVK + +G G Q ++EI +L H++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---EGC-GPQLRSGWQREIEILRTLYHEH 72
Query: 253 IVQYFGTEKD--ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
IV+Y G +D E + + +E V GSL + + +Q+ + QI G+ YLH Q+
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 311 VIHR 314
IHR
Sbjct: 133 YIHR 136
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFF-FAVKEVSLQD--QGTQGE 232
VY +L ++Y IMS LGSG+ G V F A+K +S + G+ E
Sbjct: 3 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 55
Query: 233 Q-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHL 287
L +E EI +L + H I++ +F D YI LEL+ G L K+ L
Sbjct: 56 ADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGNKRL 111
Query: 288 KDSQVSAYTWQILNGLKYLHEQNVIHR 314
K++ Y +Q+L ++YLHE +IHR
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHR 138
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 75
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 76 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 134
Query: 309 QNVIHR 314
+ +HR
Sbjct: 135 KRFVHR 140
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 26 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 80
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 26 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 80
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFF-FAVKEVSLQD--QGTQGE 232
VY +L ++Y IMS LGSG+ G V F A+K +S + G+ E
Sbjct: 2 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 54
Query: 233 Q-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHL 287
L +E EI +L + H I++ +F D YI LEL+ G L K+ L
Sbjct: 55 ADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGNKRL 110
Query: 288 KDSQVSAYTWQILNGLKYLHEQNVIHR 314
K++ Y +Q+L ++YLHE +IHR
Sbjct: 111 KEATCKLYFYQMLLAVQYLHENGIIHR 137
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D G AVK + +G G Q ++EI +L H++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---EGC-GPQLRSGWQREIEILRTLYHEH 71
Query: 253 IVQYFGTEKD--ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
IV+Y G +D E + + +E V GSL + + +Q+ + QI G+ YLH Q+
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 311 VIHR 314
IHR
Sbjct: 132 YIHR 135
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 73
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 74 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 132
Query: 309 QNVIHR 314
+ +HR
Sbjct: 133 KRFVHR 138
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 22 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 76
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 98
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q +Y L + + Y +Q+ L YL
Sbjct: 99 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 157
Query: 309 QNVIHR 314
+ +HR
Sbjct: 158 KRFVHR 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 21 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 75
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 25 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 79
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFF-FAVKEVSLQD--QGTQGE 232
VY +L ++Y IMS LGSG+ G V F A+K +S + G+ E
Sbjct: 9 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 61
Query: 233 Q-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHL 287
L +E EI +L + H I++ +F D YI LEL+ G L K+ L
Sbjct: 62 ADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGNKRL 117
Query: 288 KDSQVSAYTWQILNGLKYLHEQNVIHR 314
K++ Y +Q+L ++YLHE +IHR
Sbjct: 118 KEATCKLYFYQMLLAVQYLHENGIIHR 144
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 23 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 77
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
+Q+ LGSG++G V D + + + + + S +L +E+++L +H
Sbjct: 39 YQRVKKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
NI++ + +D+ Y+ +E G L +I + + Q+L+G+ YLH+ N
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 311 VIHR 314
++HR
Sbjct: 157 IVHR 160
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 21 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 75
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 35 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 85
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 144
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 145 LYMYQLFRSLAYIHSFGICHR 165
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEV--SLQDQGTQGEQS----VLQLEQEISLLGQFEHD 251
+ SGS+G+V G +G A+K V ++ D T S ++ +EI LL F H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 252 NI-----VQYFGTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLK 304
NI + E +KLY+ EL+ + LA++ Q + + + + IL GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 305 YLHEQNVIHR---PG 316
LHE V+HR PG
Sbjct: 149 VLHEAGVVHRDLHPG 163
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 24 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 74
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 133
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 134 LYMYQLFRSLAYIHSFGICHR 154
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 78
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 137
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 138 LYMYQLFRSLAYIHSFGICHR 158
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 29 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 79
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 138
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 139 LYMYQLFRSLAYIHSFGICHR 159
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 66
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 66
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 19 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 73
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 23 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 77
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 66
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 17 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 67
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 126
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 127 LYMYQLFRSLAYIHSFGICHR 147
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEV--SLQDQGTQGEQS----VLQLEQEISLLGQFEHD 251
+ SGS+G+V G +G A+K V ++ D T S ++ +EI LL F H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 252 NIVQ------YFGTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGL 303
NI+ +F E +KLY+ EL+ + LA++ Q + + + + IL GL
Sbjct: 90 NILGLRDIFVHF-EEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 304 KYLHEQNVIHR---PG 316
LHE V+HR PG
Sbjct: 148 HVLHEAGVVHRDLHPG 163
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 26 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 80
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 26 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 80
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 78
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 137
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 138 LYMYQLFRSLAYIHSFGICHR 158
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 23 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 77
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 21 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 75
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 100
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 159
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 160 LYMYQLFRSLAYIHSFGICHR 180
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 100
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 159
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 160 LYMYQLFRSLAYIHSFGICHR 180
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 20 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 70
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 129
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 130 LYMYQLFRSLAYIHSFGICHR 150
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 21 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 71
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 130
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 131 LYMYQLFRSLAYIHSFGICHR 151
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 21 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 75
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 52 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 102
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 161
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 162 LYMYQLFRSLAYIHSFGICHR 182
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 34 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 88
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 44 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 94
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 153
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 154 LYMYQLFRSLAYIHSFGICHR 174
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LGSG+FG V+ G F K ++ T ++ EIS++ Q H ++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFIN-----TPYPLDKYTVKNEISIMNQLHHPKLINL 113
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+D+ ++ + LE ++ G L ++Y + +++V Y Q GLK++HE +++H
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 54 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 104
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 163
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 164 LYMYQLFRSLAYIHSFGICHR 184
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q ++ L + + Y +Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 309 QNVIHR 314
+ +HR
Sbjct: 130 KRFVHR 135
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK+ LQ G ++ ++EI +L D
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQR---DFQREIQILKALHSDF 69
Query: 253 IVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHE 308
IV+Y G + L + +E + G L Q + L S++ Y+ QI G++YL
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 309 QNVIHR 314
+ +HR
Sbjct: 130 RRCVHR 135
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 157 DDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF----TD 212
DD A I D++ ++ Y E R RI + G +G G FG V++G +
Sbjct: 365 DDYAEIIDEEDTYTMPSTRDY-----EIQRERI---ELGRCIGEGQFGDVHQGIYMSPEN 416
Query: 213 DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLEL 272
A+K + E+ + QE + QF+H +IV+ G EN ++I +EL
Sbjct: 417 PAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDHPHIVKLIGV-ITENPVWIIMEL 471
Query: 273 VTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
T G L Q ++ L + + Y +Q+ L YL + +HR
Sbjct: 472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 95 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQI 145
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 204
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 205 LYMYQLFRSLAYIHSFGICHR 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVK----EVSLQD---QGTQGEQSVLQLEQEISLLGQFE 249
LG GSFG V+ F FFA+K +V L D + T E+ VL L +E
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL--------AWE 76
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD-SQVSAYTWQILNGLKYLHE 308
H + F T + + L+ +E + G L Q H D S+ + Y +I+ GL++LH
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 309 QNVIHR 314
+ +++R
Sbjct: 137 KGIVYR 142
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 157 DDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF----TD 212
DD A I D++ ++ Y E R RI + G +G G FG V++G +
Sbjct: 365 DDYAEIIDEEDTYTMPSTRDY-----EIQRERI---ELGRCIGEGQFGDVHQGIYMSPEN 416
Query: 213 DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLEL 272
A+K + E+ + QE + QF+H +IV+ G EN ++I +EL
Sbjct: 417 PAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDHPHIVKLIGV-ITENPVWIIMEL 471
Query: 273 VTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
T G L Q ++ L + + Y +Q+ L YL + +HR
Sbjct: 472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 200 SGSFGSVYEGFTDDGFFF-------AVKEVSLQDQGTQGEQSVL-------------QLE 239
SG ++G DD F F A +V L ++ + G + V+ Q+E
Sbjct: 9 SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE 68
Query: 240 QEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSL-----AKIYQEYHLKDSQVSA 294
EI +L +H NI++ F +D + +YI +E G L + + L + V+
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE 128
Query: 295 YTWQILNGLKYLHEQNVIHR 314
Q++N L Y H Q+V+H+
Sbjct: 129 LMKQMMNALAYFHSQHVVHK 148
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G +G G FG V++G + A+K + E+ + QE + QF+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHE 308
+IV+ G EN ++I +EL T G L Q ++ L + + Y +Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 309 QNVIHR 314
+ +HR
Sbjct: 130 KRFVHR 135
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVK----EVSLQD---QGTQGEQSVLQLEQEISLLGQFE 249
LG GSFG V+ F FFA+K +V L D + T E+ VL L +E
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL--------AWE 77
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD-SQVSAYTWQILNGLKYLHE 308
H + F T + + L+ +E + G L Q H D S+ + Y +I+ GL++LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 309 QNVIHR 314
+ +++R
Sbjct: 138 KGIVYR 143
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G+GSFG+V+ G AVK L +Q E+ V + +E++++ + H NIV +
Sbjct: 45 IGAGSFGTVHRA-EWHGSDVAVK--ILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFM 100
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEY----HLKDSQVSAYTWQILNGLKYLHEQN--V 311
G L I E +++GSL ++ + L + + + + + G+ YLH +N +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 312 IHR 314
+HR
Sbjct: 161 VHR 163
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQD+ + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 66
Query: 245 LGQFEHDNIVQ--YFGTEKDENKLYIFLELV---TQGSLAKIYQEYH-----LKDSQVSA 294
+ + +H NIV+ YF E K ++L LV ++ ++ + Y L V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 295 YTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 127 YMYQLFRSLAYIHSFGICHR 146
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G+GSFG+V+ G AVK L +Q E+ V + +E++++ + H NIV +
Sbjct: 45 IGAGSFGTVHRA-EWHGSDVAVK--ILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFM 100
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEY----HLKDSQVSAYTWQILNGLKYLHEQN--V 311
G L I E +++GSL ++ + L + + + + + G+ YLH +N +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 312 IHR 314
+HR
Sbjct: 161 VHR 163
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQ + + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFK--------NRELQI 66
Query: 245 LGQFEHDNIVQ--YFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQ------VSA 294
+ + +H NIV+ YF E K ++L LV A +Y+ ++ + Q V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL 126
Query: 295 YTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 127 YMYQLFRSLAYIHSFGICHR 146
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 22/126 (17%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSGSFG+VY+G + D AVK + + D + Q+ E+++L + H NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQA---FRNEVAVLRKTRHVNILLF 97
Query: 257 FGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKYLHE 308
G +N L +VTQ GS +Y+ H+++++ + Q G+ YLH
Sbjct: 98 MGYMTKDN-----LAIVTQWCEGS--SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 309 QNVIHR 314
+N+IHR
Sbjct: 151 KNIIHR 156
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G++G V + A+K++S + T ++++ +EI +L +F H+N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL----REIQILLRFRHENVIGI 106
Query: 257 -----FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + +YI +L+ + L K+ + L + + + +QIL GLKY+H NV
Sbjct: 107 RDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANV 165
Query: 312 IHR 314
+HR
Sbjct: 166 LHR 168
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 228 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 282
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D+ G AVK + + G + L++EI +L H+N
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH----IADLKKEIEILRNLYHEN 84
Query: 253 IVQYFG--TEKDENKLYIFLELVTQGSLAKIYQEYHLKD------SQVSAYTWQILNGLK 304
IV+Y G TE N + + +E + GSL +EY K+ Q Y QI G+
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSL----KEYLPKNKNKINLKQQLKYAVQICKGMD 140
Query: 305 YLHEQNVIHR 314
YL + +HR
Sbjct: 141 YLGSRQYVHR 150
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 267 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 321
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G + A+K + GT +S L+ E ++ + +HD +VQ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLE---EAQIMKKLKHDKLVQLY 70
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYH---LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+E +YI E + +GSL ++ LK + Q+ G+ Y+ N IHR
Sbjct: 71 AVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
+Q+ P+GSG+ G V F T G AVK++S + Q + + +E+ LL H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS---RPFQNQTHAKRAYRELVLLKCVNH 82
Query: 251 DNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLK 304
NI+ + L Y+ +EL+ I+ E L ++S +Q+L G+K
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQMLCGIK 140
Query: 305 YLHEQNVIHR 314
+LH +IHR
Sbjct: 141 HLHSAGIIHR 150
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 195 GAPLGSGSFG-SVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G LG G FG ++ + G +KE+ D+ TQ ++ L+ E+ ++ EH N+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ--RTFLK---EVKVMRCLEHPNV 69
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNV 311
+++ G + +L E + G+L I + + SQ ++ I +G+ YLH N+
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 312 IHR 314
IHR
Sbjct: 130 IHR 132
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYE---GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G F +E T + F + SL + Q E+ + EIS+ H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHVV 102
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ G +D + +++ LEL + SL ++++ L + + Y QI+ G +YLH VIH
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 314 R 314
R
Sbjct: 163 R 163
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQ-------DQG 228
VY +L ++Y IMS LGSG+ G V F K+V+++ G
Sbjct: 128 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERK----TCKKVAIRIISKRKFAIG 176
Query: 229 TQGEQ-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQ 283
+ E L +E EI +L + H I++ +F D YI LEL+ G L K+
Sbjct: 177 SAREADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG 232
Query: 284 EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
LK++ Y +Q+L ++YLHE +IHR
Sbjct: 233 NKRLKEATCKLYFYQMLLAVQYLHENGIIHR 263
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQ + + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN--------RELQI 66
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS 243
R + + +G LG G F YE T + F V S+ + Q E+ + EI+
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 78
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNG 302
+ ++ ++V + G +D++ +Y+ LE+ + SL ++++ + + + + Q + G
Sbjct: 79 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 138
Query: 303 LKYLHEQNVIHR 314
++YLH VIHR
Sbjct: 139 VQYLHNNRVIHR 150
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQ-------DQG 228
VY +L ++Y IMS LGSG+ G V F K+V+++ G
Sbjct: 142 VYPKALRDEY---IMS----KTLGSGACGEVKLAFERK----TCKKVAIRIISKRKFAIG 190
Query: 229 TQGEQ-SVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQGSL-AKIYQ 283
+ E L +E EI +L + H I++ +F D YI LEL+ G L K+
Sbjct: 191 SAREADPALNVETEIEILKKLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG 246
Query: 284 EYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
LK++ Y +Q+L ++YLHE +IHR
Sbjct: 247 NKRLKEATCKLYFYQMLLAVQYLHENGIIHR 277
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK+ LQ G ++ ++EI +L D
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQR---DFQREIQILKALHSDF 73
Query: 253 IVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHE 308
IV+Y G + L + +E + G L Q + L S++ Y+ QI G++YL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 309 QNVIHR 314
+ +HR
Sbjct: 134 RRCVHR 139
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VYEG + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 225 LGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 279
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E +T G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G +VY +D A+K + + + + E+++ + E+E+ Q H NIV
Sbjct: 19 LGGGGMSTVY--LAEDTILNIKVAIKAIFIPPR--EKEETLKRFEREVHNSSQLSHQNIV 74
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA--YTWQILNGLKYLHEQNVI 312
+++++ Y+ +E + +L++ Y E H S +A +T QIL+G+K+ H+ ++
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSE-YIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133
Query: 313 HR 314
HR
Sbjct: 134 HR 135
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G FG V Y+ D+ G AVK + + G + L++EI +L H+N
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH----IADLKKEIEILRNLYHEN 72
Query: 253 IVQYFG--TEKDENKLYIFLELVTQGSLAKIYQEYHLKD------SQVSAYTWQILNGLK 304
IV+Y G TE N + + +E + GSL +EY K+ Q Y QI G+
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSL----KEYLPKNKNKINLKQQLKYAVQICKGMD 128
Query: 305 YLHEQNVIHR 314
YL + +HR
Sbjct: 129 YLGSRQYVHR 138
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS 243
R + + +G LG G F YE T + F V S+ + Q E+ + EI+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 94
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNG 302
+ ++ ++V + G +D++ +Y+ LE+ + SL ++++ + + + + Q + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 303 LKYLHEQNVIHR 314
++YLH VIHR
Sbjct: 155 VQYLHNNRVIHR 166
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYE---GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G F +E T + F + SL + Q E+ + EIS+ H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHVV 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ G +D + +++ LEL + SL ++++ L + + Y QI+ G +YLH VIH
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 314 R 314
R
Sbjct: 145 R 145
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R + +S+ +G+GSFG VY+ D G A+K+V LQ + + +E+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN--------RELQI 66
Query: 245 LGQFEHDNIVQ--YF----GTEKDENKLYIFLELVTQGSLAKIYQEYH-----LKDSQVS 293
+ + +H NIV+ YF G +KDE L + L+ V + ++ ++ + Y L V
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK 125
Query: 294 AYTWQILNGLKYLHEQNVIHR 314
Y +Q+ L Y+H + HR
Sbjct: 126 LYMYQLFRSLAYIHSFGICHR 146
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK+ LQ G ++ ++EI +L D
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQR---DFQREIQILKALHSDF 85
Query: 253 IVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHE 308
IV+Y G + L + +E + G L Q + L S++ Y+ QI G++YL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 309 QNVIHR 314
+ +HR
Sbjct: 146 RRCVHR 151
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS 243
R + + +G LG G F YE T + F V S+ + Q E+ + EI+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 94
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNG 302
+ ++ ++V + G +D++ +Y+ LE+ + SL ++++ + + + + Q + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 303 LKYLHEQNVIHR 314
++YLH VIHR
Sbjct: 155 VQYLHNNRVIHR 166
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS 243
R + + +G LG G F YE T + F V S+ + Q E+ + EI+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 94
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNG 302
+ ++ ++V + G +D++ +Y+ LE+ + SL ++++ + + + + Q + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 303 LKYLHEQNVIHR 314
++YLH VIHR
Sbjct: 155 VQYLHNNRVIHR 166
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYE---GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G F +E T + F + SL + Q E+ + EIS+ H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHVV 80
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ G +D + +++ LEL + SL ++++ L + + Y QI+ G +YLH VIH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 314 R 314
R
Sbjct: 141 R 141
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LG G+FGSV Y+ D+ G AVK+ LQ G ++ ++EI +L D
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQR---DFQREIQILKALHSDF 72
Query: 253 IVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHE 308
IV+Y G + L + +E + G L Q + L S++ Y+ QI G++YL
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 309 QNVIHR 314
+ +HR
Sbjct: 133 RRCVHR 138
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 198 LGSGSFGSVYEGF--TDDGFFFAVKEVSLQDQGTQG---EQSVLQLEQEISLLGQFEHDN 252
+G+G FG VY+G T G KEV + + + E+ + E ++GQF H N
Sbjct: 52 IGAGEFGEVYKGMLKTSSG----KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW-----QILNGLKYLH 307
I++ G + I E + G+L K +E KD + S I G+KYL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 308 EQNVIHR 314
N +HR
Sbjct: 165 NMNYVHR 171
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 14/127 (11%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG+ V + A+K ++L+ + + S+ +L +EI + Q H NIV Y
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLE----KCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 257 FGTEKDENKLYIFLELVTQGSLAKI---------YQEYHLKDSQVSAYTWQILNGLKYLH 307
+ + +++L++ ++L++ GS+ I ++ L +S ++ ++L GL+YLH
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 308 EQNVIHR 314
+ IHR
Sbjct: 134 KNGQIHR 140
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYE---GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G F +E T + F + SL + Q E+ + EIS+ H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHVV 104
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ G +D + +++ LEL + SL ++++ L + + Y QI+ G +YLH VIH
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 314 R 314
R
Sbjct: 165 R 165
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 75 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 77 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 84 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 67/127 (52%), Gaps = 14/127 (11%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG+ V + A+K ++L+ + + S+ +L +EI + Q H NIV Y
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLE----KCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 257 FGTEKDENKLYIFLELVTQGSLAKI---------YQEYHLKDSQVSAYTWQILNGLKYLH 307
+ + +++L++ ++L++ GS+ I ++ L +S ++ ++L GL+YLH
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 308 EQNVIHR 314
+ IHR
Sbjct: 139 KNGQIHR 145
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
+Q+ P+GSG+ G V F T G AVK++S + Q + + +E+ LL H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS---RPFQNQTHAKRAYRELVLLKCVNH 80
Query: 251 DNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLK 304
NI+ + L Y+ +EL+ I+ E L ++S +Q+L G+K
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQMLCGIK 138
Query: 305 YLHEQNVIHR 314
+LH +IHR
Sbjct: 139 HLHSAGIIHR 148
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 76 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 80 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 81 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 71 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINAML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+F V + G FAVK V + + S L++E S+ +H +IV+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 257 FGTEKDENKLYIFLELVTQGSLA-----KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + LY+ E + L + + ++ S Y QIL L+Y H+ N+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 312 IHR 314
IHR
Sbjct: 152 IHR 154
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 75 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYE---GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G F +E T + F + SL + Q E+ + EIS+ H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHVV 80
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ G +D + +++ LEL + SL ++++ L + + Y QI+ G +YLH VIH
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 314 R 314
R
Sbjct: 141 R 141
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 81 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYE---GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G F +E T + F + SL + Q E+ + EIS+ H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHVV 78
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ G +D + +++ LEL + SL ++++ L + + Y QI+ G +YLH VIH
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 314 R 314
R
Sbjct: 139 R 139
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 70 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 75 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
++ G LGSG F V + G F + +S +G E+ +E+E+++L
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE----IEREVNIL 62
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ H NI+ +++ + + LELV+ G L E L + + + + QIL+G+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 305 YLHEQNVIH 313
YLH + + H
Sbjct: 123 YLHSKRIAH 131
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 83 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 233 QSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQ 291
+ V + +QEI ++ +H NI++ + T +D +Y+ +EL T G L ++ + ++S
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107
Query: 292 VSAYTWQILNGLKYLHEQNVIHR 314
+ +L+ + Y H+ NV HR
Sbjct: 108 AARIMKDVLSAVAYCHKLNVAHR 130
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G G G FG VY+G+ ++ K ++ D T E+ Q +QEI + + +H+N+V
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT--EELKQQFDQEIKVXAKCQHENLV 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSL----------AKIYQEYHLKDSQVSAYTWQILNGLK 304
+ G D + L + GSL + K +Q +A NG+
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAA------NGIN 138
Query: 305 YLHEQNVIHR 314
+LHE + IHR
Sbjct: 139 FLHENHHIHR 148
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LGSG+F V+ + T G FA+K + LE EI++L + +H+NIV
Sbjct: 17 LGSGAFSEVFLVKQRLT--GKLFALKCIKKSPAFRDS-----SLENEIAVLKKIKHENIV 69
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ Y+ ++LV+ G L +I + + S Q+L+ +KYLHE ++H
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 314 R 314
R
Sbjct: 130 R 130
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G FG V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 85 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 233 QSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQ 291
+ V + +QEI ++ +H NI++ + T +D +Y+ +EL T G L ++ + ++S
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 124
Query: 292 VSAYTWQILNGLKYLHEQNVIHR 314
+ +L+ + Y H+ NV HR
Sbjct: 125 AARIMKDVLSAVAYCHKLNVAHR 147
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K +G GS+G V++ D G A+K+ + ++ L+ EI +L Q +H
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR---EIRMLKQLKH 61
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQILNGLKYLHE 308
N+V + + +L++ E L ++ YQ + + V + TWQ L + + H+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHK 120
Query: 309 QNVIHR 314
N IHR
Sbjct: 121 HNCIHR 126
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 60
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 308 EQNVIHR 314
+ HR
Sbjct: 121 GIGITHR 127
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G F V + G FAVK V + + S L++E S+ +H +IV+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 257 FGTEKDENKLYIFLELVTQGSLA-----KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + LY+ E + L + + ++ S Y QIL L+Y H+ N+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 312 IHR 314
IHR
Sbjct: 152 IHR 154
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 143
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 144 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHR 227
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
++ G LGSG F V + G F + +S +G E+ +E+E+++L
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE----IEREVNIL 69
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ H NI+ +++ + + LELV+ G L E L + + + + QIL+G+
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 305 YLHEQNVIH 313
YLH + + H
Sbjct: 130 YLHSKRIAH 138
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G F V + G FAVK V + + S L++E S+ +H +IV+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 257 FGTEKDENKLYIFLELVTQGSLA-----KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
T + LY+ E + L + + ++ S Y QIL L+Y H+ N+
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 312 IHR 314
IHR
Sbjct: 154 IHR 156
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 196 APLGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ---FEH 250
A +G G++G V++ + G F A+K V +Q T E L +E+++L FEH
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ---TGEEGMPLSTIREVAVLRHLETFEH 73
Query: 251 DNIVQYFGT-----EKDENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQILNGL 303
N+V+ F E KL + E V Q + E + + +Q+L GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 304 KYLHEQNVIHR 314
+LH V+HR
Sbjct: 134 DFLHSHRVVHR 144
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 196 APLGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ---FEH 250
A +G G++G V++ + G F A+K V +Q T E L +E+++L FEH
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ---TGEEGMPLSTIREVAVLRHLETFEH 73
Query: 251 DNIVQYFGT-----EKDENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQILNGL 303
N+V+ F E KL + E V Q + E + + +Q+L GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 304 KYLHEQNVIHR 314
+LH V+HR
Sbjct: 134 DFLHSHRVVHR 144
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 198 LGSGSFGSVYEGFTDDGF---FFAVKEVSLQD-QGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG+G+F V +D A+K ++ + +G +G +E EI++L + +H NI
Sbjct: 26 LGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEG-----SMENEIAVLHKIKHPNI 78
Query: 254 VQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
V + LY+ ++LV+ G L +I ++ + S +Q+L+ +KYLH+ ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 313 HR 314
HR
Sbjct: 139 HR 140
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEIXINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 98 GK--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 198 LGSGSFGSVYEGFTDDGF---FFAVKEVSLQD-QGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG+G+F V +D A+K ++ + +G +G +E EI++L + +H NI
Sbjct: 26 LGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEG-----SMENEIAVLHKIKHPNI 78
Query: 254 VQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
V + LY+ ++LV+ G L +I ++ + S +Q+L+ +KYLH+ ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 313 HR 314
HR
Sbjct: 139 HR 140
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 198 LGSGSFGSVYEGFTDDGF---FFAVKEVSLQD-QGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG+G+F V +D A+K ++ + +G +G +E EI++L + +H NI
Sbjct: 26 LGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEG-----SMENEIAVLHKIKHPNI 78
Query: 254 VQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
V + LY+ ++LV+ G L +I ++ + S +Q+L+ +KYLH+ ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 313 HR 314
HR
Sbjct: 139 HR 140
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 196 APLGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ---FEH 250
A +G G++G V++ + G F A+K V +Q T E L +E+++L FEH
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ---TGEEGMPLSTIREVAVLRHLETFEH 73
Query: 251 DNIVQYFGT-----EKDENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQILNGL 303
N+V+ F E KL + E V Q + E + + +Q+L GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 304 KYLHEQNVIHR 314
+LH V+HR
Sbjct: 134 DFLHSHRVVHR 144
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R +I + G LG G+FG V G + G AVK L Q + V ++ +EI
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVK--ILNRQKIRSLDVVGKIRREIQN 69
Query: 245 LGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGL 303
L F H +I++ + + +++ +E V+ G L I + L + + QIL+G+
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGV 129
Query: 304 KYLHEQNVIHR 314
Y H V+HR
Sbjct: 130 DYCHRHMVVHR 140
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEIXINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 98 GK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 198 LGSGSFGSVYEGFTDDGF---FFAVKEVSLQD-QGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG+G+F V +D A+K ++ + +G +G +E EI++L + +H NI
Sbjct: 26 LGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEG-----SMENEIAVLHKIKHPNI 78
Query: 254 VQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
V + LY+ ++LV+ G L +I ++ + S +Q+L+ +KYLH+ ++
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 313 HR 314
HR
Sbjct: 139 HR 140
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQS-VLQLEQEISLLGQFEH 250
+Q+ LGSG++G V D A + + + + + S L E+++L Q +H
Sbjct: 23 YQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NI++ + +D+ Y+ +E+ G L +I + + Q+L+G YLH+
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 310 NVIHR 314
N++HR
Sbjct: 141 NIVHR 145
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 89
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 90 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHR 173
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEIXINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS 293
G+ H NI+ G + LY+ +E ++G+L + Y + + Q++
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 26/129 (20%)
Query: 198 LGSGSFGSVYEG---FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G++ +VY+G TD+ A+KE+ L+ + E + +E+SLL +H NIV
Sbjct: 10 LGEGTYATVYKGKSKLTDN--LVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIV 63
Query: 255 QYFGTEKDENKLYIFLELVTQ---------GSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
E L + E + + G++ ++ V + +Q+L GL Y
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN--------VKLFLFQLLRGLAY 115
Query: 306 LHEQNVIHR 314
H Q V+HR
Sbjct: 116 CHRQKVLHR 124
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEEDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 86
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 87 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHR 170
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 84
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ +E ++G+L + + EY ++V
Sbjct: 85 GK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHR 168
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G++G V T++ AVK V ++ E +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 62
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 308 EQNVIHR 314
+ HR
Sbjct: 123 GIGITHR 129
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 198 LGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G++G V T++ AVK V ++ E +++EI + H+N+V
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKMLNHENVV 67
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH + H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH 127
Query: 314 R 314
R
Sbjct: 128 R 128
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 67
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 128 YLHSLQIAH 136
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 67
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 128 YLHSLQIAH 136
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFA------VKEVSLQDQGTQGEQSVLQLEQEISLL 245
+Q+ LGSG++G V D A +K+ S+ G L E+++L
Sbjct: 6 YQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSG-----ALLDEVAVL 58
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLK 304
Q +H NI++ + +D+ Y+ +E+ G L +I + + Q+L+G
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 305 YLHEQNVIHR 314
YLH+ N++HR
Sbjct: 119 YLHKHNIVHR 128
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 197 PLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
P+GSG++GSV + D AVK++S Q + + E+ LL +H+N+
Sbjct: 35 PVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 254 VQYF------GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
+ + +D +++Y+ L+ L I + L D V +Q+L GLKY+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 308 EQNVIHR 314
+IHR
Sbjct: 149 SAGIIHR 155
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + LELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 197 PLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
P+GSG++GSV + D AVK++S Q + + E+ LL +H+N+
Sbjct: 27 PVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 81
Query: 254 VQYF------GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
+ + +D +++Y+ L+ L I + L D V +Q+L GLKY+H
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 308 EQNVIHR 314
+IHR
Sbjct: 141 SAGIIHR 147
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG FG V G + AVK + +G S + QE + + H +V+++
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK------EGSMSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G E +YI E ++ G L + + L+ SQ+ + + G+ +L IHR
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G FG VY+G DG AVK L+++ TQG + LQ + E+ ++ H N+++
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKR--LKEERTQGGE--LQFQTEVEMISMAVHRNLLRLR 93
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQIL-----NGLKYLHEQ--- 309
G + + + GS+A +E + Q + GL YLH+
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 310 NVIHR 314
+IHR
Sbjct: 154 KIIHR 158
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG GS+G V E + ++ + + + +++EI LL + H N++Q
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 258 GT--EKDENKLYIFLELVTQG--SLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+++ K+Y+ +E G + E Q Y Q+++GL+YLH Q ++H
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132
Query: 314 R 314
+
Sbjct: 133 K 133
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
W LG G+ G V T++ AVK V ++ E +++EI +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAV--AVKIVDMKRAVDCPEN----IKKEICINKML 61
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
H+N+V+++G ++ N Y+FLE + G L +I + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 308 EQNVIHR 314
+ HR
Sbjct: 122 GIGITHR 128
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
++ G LGSG F V + G F + + +G E+ +E+E+++L
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREE----IEREVNIL 83
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ H NI+ +++ + + LELV+ G L E L + + + + QIL+G+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 305 YLHEQNVIH 313
YLH + + H
Sbjct: 144 YLHSKRIAH 152
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 196 APLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
A LG G+FG V + D ++A+K++ E+ + + E+ LL H +V
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIR------HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 255 QYFGT-------------EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---- 297
+Y+ K ++ L+I +E G+L + +L + Q Y W
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-NQQRDEY-WRLFR 123
Query: 298 QILNGLKYLHEQNVIHR 314
QIL L Y+H Q +IHR
Sbjct: 124 QILEALSYIHSQGIIHR 140
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 149
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI 242
++R ++ G LG GSF +V E T + + L+ + E V + +E
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRER 60
Query: 243 SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILN 301
++ + +H V+ + T +D+ KLY L G L K ++ D + YT +I++
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 120
Query: 302 GLKYLHEQNVIHR 314
L+YLH + +IHR
Sbjct: 121 ALEYLHGKGIIHR 133
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI 242
++R ++ G LG GSF +V E T + + L+ + E V + +E
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRER 61
Query: 243 SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILN 301
++ + +H V+ + T +D+ KLY L G L K ++ D + YT +I++
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 121
Query: 302 GLKYLHEQNVIHR 314
L+YLH + +IHR
Sbjct: 122 ALEYLHGKGIIHR 134
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 197 PLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
P+GSG++GSV + D AVK++S Q + + E+ LL +H+N+
Sbjct: 35 PVGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 254 VQYF------GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLH 307
+ + +D +++Y+ L+ L I + L D V +Q+L GLKY+H
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 308 EQNVIHR 314
+IHR
Sbjct: 149 SAGIIHR 155
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI 242
++R ++ G LG GSF +V E T + + L+ + E V + +E
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRER 58
Query: 243 SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILN 301
++ + +H V+ + T +D+ KLY L G L K ++ D + YT +I++
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 118
Query: 302 GLKYLHEQNVIHR 314
L+YLH + +IHR
Sbjct: 119 ALEYLHGKGIIHR 131
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI 242
++R ++ G LG GSF +V E T + + L+ + E V + +E
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRER 59
Query: 243 SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILN 301
++ + +H V+ + T +D+ KLY L G L K ++ D + YT +I++
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 119
Query: 302 GLKYLHEQNVIHR 314
L+YLH + +IHR
Sbjct: 120 ALEYLHGKGIIHR 132
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V D +A+K ++ Q + E V + +E+ ++ EH +V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNE--VRNVFKELQIMQGLEHPFLVNL 80
Query: 257 FGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +DE +++ ++L+ G L + Q H K+ V + +++ L YL Q +IHR
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHR 139
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G++G VY+ T A+K + L+ ++G G +E+SLL + +H NI+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI-----REVSLLKELQHRNII 96
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS-----AYTWQILNGLKYLHEQ 309
+ ++L++ E ++Y K+ VS ++ +Q++NG+ + H +
Sbjct: 97 ELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 310 NVIHR 314
+HR
Sbjct: 152 RCLHR 156
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 129
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G F +VY+ + A+K++ L + + +EI LL + H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 257 ---FGTEKDENKLYIFLE-----LVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
FG + + + ++ F+E ++ SL L S + AY L GL+YLH+
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLV-------LTPSHIKAYMLMTLQGLEYLHQ 130
Query: 309 QNVIHR 314
++HR
Sbjct: 131 HWILHR 136
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G FA K ++ + + Q +LE+E + + +H NIV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRKLQHPNIVRL 70
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++E+ Y+ +LVT G L + + +E++ ++ S QIL + Y H ++HR
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSNGIVHR 129
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V D G AVK +S + + ++ L +E+ LL Q +H NI+
Sbjct: 34 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQLDHPNIM 89
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ + +D+ Y+ E+ T G L +I + + Q+L+G+ Y+H+ ++H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 149
Query: 314 R 314
R
Sbjct: 150 R 150
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G FA K ++ + + Q +LE+E + + +H NIV+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRKLQHPNIVRL 69
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++E+ Y+ +LVT G L + + +E++ ++ S QIL + Y H ++HR
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSNGIVHR 128
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG+G G V+ G+ + AVK + QG S E +L+ Q +H +V+ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 258 GTEKDENKLYIFLELVTQGSLA---KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
E +YI E + GSL K L +++ QI G+ ++ E+N IHR
Sbjct: 75 AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ + ++G+L + + EY ++V
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 197 PLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
P+GSG++G+V DG A + + Q E + +E+ LL H+N++
Sbjct: 32 PVGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 257 FG------TEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
T D Y+ + + L K+ + L + ++ +Q+L GL+Y+H
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 311 VIHR---PG 316
+IHR PG
Sbjct: 149 IIHRDLKPG 157
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G FA K ++ + + Q +LE+E + + +H NIV+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRKLQHPNIVRL 93
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++E+ Y+ +LVT G L + + +E++ ++ S QIL + Y H ++HR
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSNGIVHR 152
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
+G+G FG V G G A+K + +G E+ + E S++GQFEH NI
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW-----QILNGLKYLHE 308
++ G + + I E + G+L + L D Q + I +G++YL E
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 309 QNVIHR 314
+ +HR
Sbjct: 137 MSYVHR 142
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LGSG+FG+VY+G + +G + T G ++ ++ E ++ +H ++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + + +L+ G L + E+ ++ + + QI G+ YL E+ ++HR
Sbjct: 106 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 437 GICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V D G AVK +S + + ++ L +E+ LL Q +H NI+
Sbjct: 57 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQLDHPNIM 112
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ + +D+ Y+ E+ T G L +I + + Q+L+G+ Y+H+ ++H
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 172
Query: 314 R 314
R
Sbjct: 173 R 173
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V D G AVK +S + + ++ L +E+ LL Q +H NI+
Sbjct: 40 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQLDHPNIM 95
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ + +D+ Y+ E+ T G L +I + + Q+L+G+ Y+H+ ++H
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 155
Query: 314 R 314
R
Sbjct: 156 R 156
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
+G+G FG V G G A+K + +G E+ + E S++GQFEH NI
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTL----KGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW-----QILNGLKYLHE 308
++ G + + I E + G+L + L D Q + I +G++YL E
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 309 QNVIHR 314
+ +HR
Sbjct: 135 MSYVHR 140
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVYEGFTDD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V D G AVK +S + + ++ L +E+ LL Q +H NI+
Sbjct: 58 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQLDHPNIM 113
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ + +D+ Y+ E+ T G L +I + + Q+L+G+ Y+H+ ++H
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVH 173
Query: 314 R 314
R
Sbjct: 174 R 174
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 188 RIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQEIS 243
I ++Q LG GSFG V + T G A+K ++ L QG ++E+EIS
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-----RIEREIS 56
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGL 303
L H +I++ + K ++++ + +E I Q + + + + QI++ +
Sbjct: 57 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 116
Query: 304 KYLHEQNVIHR 314
+Y H ++HR
Sbjct: 117 EYCHRHKIVHR 127
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LGSG+FG+V +G+ V + +L E +++ Q ++ IV+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 258 GTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G + E+ + + +E+ G L K + Q H+KD + Q+ G+KYL E N +HR
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 494
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G FA K ++ + + Q +LE+E + + +H NIV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRKLQHPNIVRL 70
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++E+ Y+ +LVT G L + + +E++ ++ S QIL + Y H ++HR
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSNGIVHR 129
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LGSG+FG+VY+G + +G + T G ++ ++ E ++ +H ++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW--QILNGLKYLHEQNVIHR 314
G + + +L+ G L + E+ W QI G+ YL E+ ++HR
Sbjct: 83 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 188 RIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQEIS 243
I ++Q LG GSFG V + T G A+K ++ L QG ++E+EIS
Sbjct: 12 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-----RIEREIS 66
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGL 303
L H +I++ + K ++++ + +E I Q + + + + QI++ +
Sbjct: 67 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 126
Query: 304 KYLHEQNVIHR 314
+Y H ++HR
Sbjct: 127 EYCHRHKIVHR 137
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 195 GAPLGSGSFGSVYE----GFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLL 245
G PLG G+FG V G D AVK L+D T+ + S L E E+ ++
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMI 97
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-------EYHLKDSQVS----- 293
G+ H NI+ G + LY+ + ++G+L + + EY ++V
Sbjct: 98 GK--HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 294 -----AYTWQILNGLKYLHEQNVIHR 314
+ T+Q+ G++YL Q IHR
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHR 181
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 188 RIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQEIS 243
I ++Q LG GSFG V + T G A+K ++ L QG ++E+EIS
Sbjct: 6 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-----RIEREIS 60
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGL 303
L H +I++ + K ++++ + +E I Q + + + + QI++ +
Sbjct: 61 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 120
Query: 304 KYLHEQNVIHR 314
+Y H ++HR
Sbjct: 121 EYCHRHKIVHR 131
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 188 RIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQEIS 243
I ++Q LG GSFG V + T G A+K ++ L QG ++E+EIS
Sbjct: 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-----RIEREIS 65
Query: 244 LLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGL 303
L H +I++ + K ++++ + +E I Q + + + + QI++ +
Sbjct: 66 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 125
Query: 304 KYLHEQNVIHR 314
+Y H ++HR
Sbjct: 126 EYCHRHKIVHR 136
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 28/140 (20%)
Query: 198 LGSGSFGSVY--EGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG G+FG V+ E + T D AVK +L+D + ++E LL +H+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVK--ALKDPTLAARKD---FQREAELLTNLQHE 77
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-----------------HLKDSQVSA 294
+IV+++G D + L + E + G L K + + L SQ+
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 295 YTWQILNGLKYLHEQNVIHR 314
QI +G+ YL Q+ +HR
Sbjct: 138 IASQIASGMVYLASQHFVHR 157
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK------------IYQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 78 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 136 DLVSCAYQVARGMEYLASKKCIHR 159
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 198 LGSGSFGSVYEGFTD----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
+G+G FG V G F A+K +L+ T+ ++ E S++GQF+H N+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIK--TLKSGYTEKQRR--DFLSEASIMGQFDHPNV 70
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNV 311
+ G + I E + GSL ++ Q+ I G+KYL + N
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 312 IHR 314
+HR
Sbjct: 131 VHR 133
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG+G+FG V+ T+ G FA K V T E + +EI + H +V
Sbjct: 59 LGTGAFGVVHR-VTERATGNNFAAKFVM-----TPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA--YTWQILNGLKYLHEQNVIH 313
+D+N++ + E ++ G L + + H K S+ A Y Q+ GL ++HE N +H
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 172
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 198 LGSGSFGSVYEGFTD----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
+G+G FG V G F A+K +L+ T+ ++ E S++GQF+H N+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIK--TLKSGYTEKQRR--DFLSEASIMGQFDHPNV 96
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNV 311
+ G + I E + GSL ++ Q+ I G+KYL + N
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 312 IHR 314
+HR
Sbjct: 157 VHR 159
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 153 QDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTD 212
QD F DV + D + + L FSL E + ++ LG G FG VY+G
Sbjct: 6 QDHFFDVPAEEDPEVHLGQLK----RFSLRE-LQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 213 DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLEL 272
DG AVK L+++ QG + LQ + E+ ++ H N+++ G + +
Sbjct: 61 DGTLVAVKR--LKEERXQGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116
Query: 273 VTQGSLAKIYQEYHLKDSQVSAYTWQIL-----NGLKYLHEQ---NVIHR 314
+ GS+A +E + Q + GL YLH+ +IHR
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 166
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG+G+FG V+ T+ G FA K V T E + +EI + H +V
Sbjct: 165 LGTGAFGVVHR-VTERATGNNFAAKFVM-----TPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA--YTWQILNGLKYLHEQNVIH 313
+D+N++ + E ++ G L + + H K S+ A Y Q+ GL ++HE N +H
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK------------IYQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHR 174
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQ-DQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G+G++G V G A+K++ D T ++++ +E+ +L F+HDNI+
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKHFKHDNIIA 117
Query: 256 Y---------FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYL 306
+G K +Y+ L+L+ I+ L V + +Q+L GLKY+
Sbjct: 118 IKDILRPTVPYGEFKS---VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYM 174
Query: 307 HEQNVIHR 314
H VIHR
Sbjct: 175 HSAQVIHR 182
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQ-DQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G+G++G V G A+K++ D T ++++ +E+ +L F+HDNI+
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKHFKHDNIIA 118
Query: 256 Y---------FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYL 306
+G K +Y+ L+L+ I+ L V + +Q+L GLKY+
Sbjct: 119 IKDILRPTVPYGEFKS---VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYM 175
Query: 307 HEQNVIHR 314
H VIHR
Sbjct: 176 HSAQVIHR 183
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVK----EVSLQD---QGTQGEQSVLQLEQEISLLGQFE 249
LG GSFG V + G +AVK +V LQD + T E+ +L L +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-------- 82
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
H + Q F + ++L+ +E V G L I + +++ Y +I++ L +LH+
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 309 QNVIHR 314
+ +I+R
Sbjct: 143 KGIIYR 148
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 192 WQKGAPLGSGSFGSVYE------GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
+ G LGSG F V + G F + +G E +E+E+S+L
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSIL 68
Query: 246 GQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH-LKDSQVSAYTWQILNGLK 304
+ +H N++ +++ + + ELV G L E L + + + + QILNG+
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 305 YLHEQNVIH 313
YLH + H
Sbjct: 129 YLHSLQIAH 137
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 7/123 (5%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +G G+FG V+ G D AVK + T + QE +L Q+ H NI
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSC----RETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQE--YHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G + +YI +ELV G + L+ + G++YL +
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 312 IHR 314
IHR
Sbjct: 235 IHR 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 311 VIHR 314
+IHR
Sbjct: 151 IIHR 154
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 311 VIHR 314
+IHR
Sbjct: 135 IIHR 138
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 40 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 93
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 94 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 146
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 147 LHAKSIIHR 155
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 7/123 (5%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +G G+FG V+ G D AVK + T + QE +L Q+ H NI
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSC----RETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQE--YHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G + +YI +ELV G + L+ + G++YL +
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 312 IHR 314
IHR
Sbjct: 235 IHR 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 239 EQEISLLGQF-EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-------HLKDS 290
++E+ LL + EH N+++YF TEKD YI +EL A QEY HL
Sbjct: 65 DREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-----AATLQEYVEQKDFAHLGLE 119
Query: 291 QVSAYTWQILNGLKYLHEQNVIHR 314
++ Q +GL +LH N++HR
Sbjct: 120 PITLLQ-QTTSGLAHLHSLNIVHR 142
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 311 VIHR 314
+IHR
Sbjct: 151 IIHR 154
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 33 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 86
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 87 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 139
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 140 LHAKSIIHR 148
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 311 VIHR 314
+IHR
Sbjct: 151 IIHR 154
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQ----DQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FGSV +G + K++ + QGT+ + ++ +E ++ Q ++ I
Sbjct: 344 LGCGNFGSVRQGV----YRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYI 398
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G + E L + +E+ G L K + + + S V+ Q+ G+KYL E+N
Sbjct: 399 VRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 312 IHR 314
+HR
Sbjct: 458 VHR 460
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 311 VIHR 314
+IHR
Sbjct: 153 IIHR 156
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 94
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 95 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 148 LHAKSIIHR 156
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 86 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 144 DLVSCAYQVARGMEYLASKKCIHR 167
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 311 VIHR 314
+IHR
Sbjct: 153 IIHR 156
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 15 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 68
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 69 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 121
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 122 LHAKSIIHR 130
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 24/155 (15%)
Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
NEK+ + Q G LG+G+FG V E G + V L+ E+ L
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 238 LEQEI-SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQE 284
E +I S LGQ H+NIV G + + E G L Y
Sbjct: 98 SELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 285 YHLKDSQVSA-----YTWQILNGLKYLHEQNVIHR 314
H + Q+S+ ++ Q+ G+ +L +N IHR
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHR 190
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 311 VIHR 314
+IHR
Sbjct: 153 IIHR 156
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 311 VIHR 314
+IHR
Sbjct: 153 IIHR 156
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 82 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 140 DLVSCAYQVARGMEYLASKKCIHR 163
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 311 VIHR 314
+IHR
Sbjct: 154 IIHR 157
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 311 VIHR 314
+IHR
Sbjct: 153 IIHR 156
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHR 174
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 311 VIHR 314
+IHR
Sbjct: 154 IIHR 157
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 66
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 67 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 120 LHAKSIIHR 128
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 94
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 95 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 148 LHAKSIIHR 156
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 71
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 72 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 125 LHAKSIIHR 133
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHR 174
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 66
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 67 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 120 LHAKSIIHR 128
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 311 VIHR 314
+IHR
Sbjct: 156 IIHR 159
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 66
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 67 LLFMGYSTAPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 120 LHAKSIIHR 128
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ-----------------EYHLKDS 290
H NI+ G + LY+ +E ++G+L + Q E L
Sbjct: 93 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 291 QVSAYTWQILNGLKYLHEQNVIHR 314
+ + +Q+ G++YL + IHR
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHR 174
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 85 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 143 DLVSCAYQVARGMEYLASKKCIHR 166
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
LG G +G VY G + V +L++ + E+ + +E +++ + +H N+VQ
Sbjct: 40 LGGGQYGEVYVGVWKK-YSLTVAVKTLKEDTMEVEEFL----KEAAVMKEIKHPNLVQLL 94
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---QILNGLKYLHEQNVIHR 314
G E YI E + G+L +E + ++ + QI + ++YL ++N IHR
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 71
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSAYTW-----QILNGLKY 305
+ + G L +VTQ GS +Y H+ +++ Q G+ Y
Sbjct: 72 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 125 LHAKSIIHR 133
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 311 VIHR 314
+IHR
Sbjct: 153 IIHR 156
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + A+K L+ + E V + +E ++ + +H
Sbjct: 34 GKILGEGSFSTVVLARELATSREY--AIK--ILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 311 VIHR 314
+IHR
Sbjct: 150 IIHR 153
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQ----DQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G+FGSV +G + K++ + QGT+ + ++ +E ++ Q ++ I
Sbjct: 18 LGCGNFGSVRQGV----YRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYI 72
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G + E L + +E+ G L K + + + S V+ Q+ G+KYL E+N
Sbjct: 73 VRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 312 IHR 314
+HR
Sbjct: 132 VHR 134
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + T +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 311 VIHR 314
+IHR
Sbjct: 150 IIHR 153
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKXV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ-MELDHERMSYLLYQMLXG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKXV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG GSFG V + T G AVK +S + + ++ L +E+ LL Q +H NI
Sbjct: 34 LGKGSFGEVILCKDKIT--GQECAVKVISKRQVKQKTDKE--SLLREVQLLKQLDHPNIX 89
Query: 255 QYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ + +D+ Y+ E+ T G L +I + + Q+L+G+ Y H+ ++H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVH 149
Query: 314 R 314
R
Sbjct: 150 R 150
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 81
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 139
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 140 IKHLHSAGIIHR 151
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 74
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 132
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 133 IKHLHSAGIIHR 144
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 196 APLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
A LG G+FG V + D ++A+K++ E+ + + E+ LL H +V
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIR------HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 255 QYFGT-------------EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---- 297
+Y+ K ++ L+I +E +L + +L + Q Y W
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL-NQQRDEY-WRLFR 123
Query: 298 QILNGLKYLHEQNVIHR 314
QIL L Y+H Q +IHR
Sbjct: 124 QILEALSYIHSQGIIHR 140
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 15 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 71
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 72 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 131 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKXV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 79
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 137
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 138 IKHLHSAGIIHR 149
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G+GS+G V E + + A+K++ + + +L+ EI++L + HD++V+
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR---EIAILNRLNHDHVVKV 117
Query: 257 FGT--EKDENK---LYIFLELVTQGSLAKIYQ-EYHLKDSQVSAYTWQILNGLKYLHEQN 310
KD K LY+ LE + K+++ +L + + + +L G+KY+H
Sbjct: 118 LDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG 176
Query: 311 VIHR 314
++HR
Sbjct: 177 ILHR 180
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 74
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 132
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 133 IKHLHSAGIIHR 144
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 73
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 131
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 132 IKHLHSAGIIHR 143
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 17 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 70
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSA-----YTWQILNGLKY 305
+ + G L +VTQ GS +Y H +++ Q G+ Y
Sbjct: 71 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 124 LHAKSIIHR 132
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 81
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 139
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 140 IKHLHSAGIIHR 151
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 41 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 157
Query: 313 HR 314
HR
Sbjct: 158 HR 159
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 24 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 140
Query: 313 HR 314
HR
Sbjct: 141 HR 142
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 15 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 71
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 72 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 131 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 6 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 63 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 121
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 122 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 24 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 140
Query: 313 HR 314
HR
Sbjct: 141 HR 142
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 26/144 (18%)
Query: 195 GAPLGSGSFGSVYE----GFTDDGFFFAVKEV--SLQDQGTQGEQSVLQLEQEI-SLLGQ 247
G PLG G+FG V G D K L+ T+ + S L E E+ ++G+
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 248 FEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKI------------YQEYHLKDSQVS-- 293
H NI+ G + LY+ +E ++G+L + Y H + Q+S
Sbjct: 134 --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 294 ---AYTWQILNGLKYLHEQNVIHR 314
+ +Q+ G++YL + IHR
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHR 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 118
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 176
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 177 IKHLHSAGIIHR 188
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 278 LAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +K+ + A QI++ ++Y H++ ++HR
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 82
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSA-----YTWQILNGLKY 305
+ + G L +VTQ GS +Y H +++ Q G+ Y
Sbjct: 83 LLFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 136 LHAKSIIHR 144
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ G PLG G+FG V E G V L++ T
Sbjct: 15 LPYDASKWEFPRDRL---NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH 71
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLAK--------- 280
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 72 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 281 -----IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+Y+++ L + Y++Q+ G+++L + IHR
Sbjct: 131 VPYKDLYKDF-LTLEHLICYSFQVAKGMEFLASRKXIHR 168
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 278 LAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +K+ + A QI++ ++Y H++ ++HR
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 15 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 71
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 72 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 131 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 20 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 74
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 132
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 133 IKHLHSAGIIHR 144
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 51 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 167
Query: 313 HR 314
HR
Sbjct: 168 HR 169
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R +I + G LG G+FG V G G AVK L Q + V ++++EI
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK--ILNRQKIRSLDVVGKIKREIQN 64
Query: 245 LGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGL 303
L F H +I++ + ++ +E V+ G L I + +++ + QIL+ +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 304 KYLHEQNVIHR 314
Y H V+HR
Sbjct: 125 DYCHRHMVVHR 135
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 31 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 85
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 143
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 144 IKHLHSAGIIHR 155
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 278 LAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +K+ + A QI++ ++Y H++ ++HR
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
G +GSGSFG+VY+G + D AVK +++ Q Q+ + E+ +L + H NI
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQA---FKNEVGVLRKTRHVNI 82
Query: 254 VQYFGTEKDENKLYIFLELVTQ---GSLAKIYQEYHLKDSQVSA-----YTWQILNGLKY 305
+ + G L +VTQ GS +Y H +++ Q G+ Y
Sbjct: 83 LLFMGYSTAPQ-----LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 306 LHEQNVIHR 314
LH +++IHR
Sbjct: 136 LHAKSIIHR 144
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 29/179 (16%)
Query: 161 SISDDDAEISL---LMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDD 213
SI D E+ L L Y+ S E R R+ + G PLG G+FG V E G
Sbjct: 35 SIVMDPDELPLDEHCERLPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKT 91
Query: 214 GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLEL 272
V L++ T E L E +I L+ H N+V G K L + +E
Sbjct: 92 ATCRTVAVKMLKEGATHSEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEF 150
Query: 273 VTQGSLA-------------KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
G+L+ K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 209
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 189 IMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
+ ++K A +G G+FG V++ G A+K+V ++++ + L+ EI +L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQL 72
Query: 248 FEHDNIVQYF--------GTEKDENKLYI---FLELVTQGSLAKIYQEYHLKDSQVSAYT 296
+H+N+V + + +Y+ F E G L+ + ++ L S++
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 130
Query: 297 WQILNGLKYLHEQNVIHR 314
+LNGL Y+H ++HR
Sbjct: 131 QMLLNGLYYIHRNKILHR 148
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ-MELDHERMSYLLYQMLXG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 278 LAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +K+ + A QI++ ++Y H++ ++HR
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
R +I + G LG G+FG V G G AVK L Q + V ++++EI
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK--ILNRQKIRSLDVVGKIKREIQN 64
Query: 245 LGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGL 303
L F H +I++ + ++ +E V+ G L I + +++ + QIL+ +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 304 KYLHEQNVIHR 314
Y H V+HR
Sbjct: 125 DYCHRHMVVHR 135
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 232 EQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQ 291
E V + +E ++ + +H V+ + T +D+ KLY L G L K ++ D
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 130
Query: 292 VSA-YTWQILNGLKYLHEQNVIHR 314
+ YT +I++ L+YLH + +IHR
Sbjct: 131 CTRFYTAEIVSALEYLHGKGIIHR 154
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV 254
+G+G FG V G + KE+S+ + + E+ E S++GQF+H NI+
Sbjct: 53 VGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQNVI 312
+ G + I E + GSL +++ + + Q+ I +G+KYL + +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 313 HR 314
HR
Sbjct: 170 HR 171
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 278 LAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + +K+ + A QI++ ++Y H++ ++HR
Sbjct: 100 VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 73
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ-MELDHERMSYLLYQMLXG 131
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 132 IKHLHSAGIIHR 143
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 222 VSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAK- 280
V + D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G +
Sbjct: 45 VKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 104
Query: 281 IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +K+ + A QI++ ++Y H++ ++HR
Sbjct: 105 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHR 138
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 25/137 (18%)
Query: 198 LGSGSFGSVY--EGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG G+FG V+ E + D AVK +L+D + +E LL +H+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVK--TLKDASDNARKD---FHREAELLTNLQHE 75
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--------------HLKDSQVSAYTW 297
+IV+++G + + L + E + G L K + + L SQ+
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 298 QILNGLKYLHEQNVIHR 314
QI G+ YL Q+ +HR
Sbjct: 136 QIAAGMVYLASQHFVHR 152
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVY----EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG GSFG V+ D G +A+K + + T + ++ + E +L H +
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLK---KATLKVRDRVRTKMERDILADVNHPFV 92
Query: 254 VQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
V+ + E KLY+ L+ + G L ++ +E + V Y ++ GL +LH +I
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGII 152
Query: 313 HR 314
+R
Sbjct: 153 YR 154
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ ++ H NIV+ F + E LY+ +E + G
Sbjct: 33 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 92
Query: 278 LAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ Y H +K+ + A QI++ ++Y H++ ++HR
Sbjct: 93 VFD-YLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHR 130
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 27/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ G PLG G+FG V E G V L++ T
Sbjct: 16 LPYDASKWEFPRDRL---NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 72
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLAK--------- 280
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 73 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 131
Query: 281 --------IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+Y+++ L + Y++Q+ G+++L + IHR
Sbjct: 132 VPYKTPEDLYKDF-LTLEHLICYSFQVAKGMEFLASRKCIHR 172
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSV---YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V Y+ D A+K++S + Q + + +E+ L+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVLMKCV 118
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L Y+ +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 176
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 177 IKHLHSAGIIHR 188
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L+++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 194 KGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQ-DQGTQGEQSVLQLEQEISLLGQFEHD 251
K PLG GSF + FAVK +S + + TQ E + L+L + H
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--------HP 66
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQN 310
NIV+ D+ ++ +EL+ G L +I ++ H +++ S ++++ + ++H+
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 311 VIHR 314
V+HR
Sbjct: 127 VVHR 130
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEG-FTD---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G FG VYEG +T+ + AVK +D ++ + E ++ +H +I
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFM---SEAVIMKNLDHPHI 71
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G ++E +I +EL G L + + LK + Y+ QI + YL N
Sbjct: 72 VKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 312 IHR 314
+HR
Sbjct: 131 VHR 133
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 189 IMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
+ ++K A +G G+FG V++ G A+K+V ++++ + L+ EI +L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQL 73
Query: 248 FEHDNIVQYF--------GTEKDENKLYI---FLELVTQGSLAKIYQEYHLKDSQVSAYT 296
+H+N+V + + +Y+ F E G L+ + ++ L S++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 131
Query: 297 WQILNGLKYLHEQNVIHR 314
+LNGL Y+H ++HR
Sbjct: 132 QMLLNGLYYIHRNKILHR 149
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 27 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 81
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 139
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 140 IKHLHSAGIIHR 151
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVVAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKVV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L+++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ-MELDHERMSYLLYQMLVG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKVV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L+++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 189 IMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
+ ++K A +G G+FG V++ G A+K+V ++++ + L+ EI +L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQL 73
Query: 248 FEHDNIVQYF--------GTEKDENKLYI---FLELVTQGSLAKIYQEYHLKDSQVSAYT 296
+H+N+V + + +Y+ F E G L+ + ++ L S++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 131
Query: 297 WQILNGLKYLHEQNVIHR 314
+LNGL Y+H ++HR
Sbjct: 132 QMLLNGLYYIHRNKILHR 149
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L+++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ-MELDHERMSYLLYQMLCG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 189 IMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
+ ++K A +G G+FG V++ G A+K+V ++++ + L+ EI +L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---EIKILQL 73
Query: 248 FEHDNIVQYF------GTEKDENKLYIFL-----ELVTQGSLAKIYQEYHLKDSQVSAYT 296
+H+N+V + + K I+L E G L+ + ++ L S++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 131
Query: 297 WQILNGLKYLHEQNVIHR 314
+LNGL Y+H ++HR
Sbjct: 132 QMLLNGLYYIHRNKILHR 149
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 28/163 (17%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 17 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 73
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLAK--------- 280
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 74 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 132
Query: 281 ---------IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+Y+++ L + Y++Q+ G+++L + IHR
Sbjct: 133 VPYKEAPEDLYKDF-LTLEHLICYSFQVAKGMEFLASRKCIHR 174
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 28 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKCV 82
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L ++ Q L ++S +Q+L G
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQ-MELDHERMSYLLYQMLCG 140
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 141 IKHLHSAGIIHR 152
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEG-FTD---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G FG VYEG +T+ + AVK +D ++ + E ++ +H +I
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFM---SEAVIMKNLDHPHI 87
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G ++E +I +EL G L + + LK + Y+ QI + YL N
Sbjct: 88 VKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 312 IHR 314
+HR
Sbjct: 147 VHR 149
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 238 LEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYT 296
+ EI +L + H NI++ + ++ + LELVT G L +I ++ + + +
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV 154
Query: 297 WQILNGLKYLHEQNVIHR 314
QIL + YLHE ++HR
Sbjct: 155 KQILEAVAYLHENGIVHR 172
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 195 GAPLGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
G LG GSF +V E T + + L+ + E V + +E ++ + +H
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKI----LEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQN 310
V+ + +D+ KLY L G L K ++ D + YT +I++ L+YLH +
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 311 VIHR 314
+IHR
Sbjct: 158 IIHR 161
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G+F V +EV+++ D+ S+ +L +E+ ++ H NIV+
Sbjct: 23 IGKGNFAKVKLA----RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 256 YFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
F + E LY+ +E + G + + +K+ + + QI++ ++Y H++ ++HR
Sbjct: 79 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 138
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 6 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + E G+L+
Sbjct: 63 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF 121
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 122 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV--LQLEQEISLLGQFEHDNIVQ 255
+G GS+G VY + + A K V+++ E + ++ +EI++L + + D I++
Sbjct: 36 IGRGSYGYVYLAYDKN----ANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 91
Query: 256 YFGTEKDEN-----KLYIFLELVTQGSLAKIYQ-EYHLKDSQVSAYTWQILNGLKYLHEQ 309
E+ +LYI LE + L K+++ L + V + +L G K++HE
Sbjct: 92 LHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHES 150
Query: 310 NVIHR 314
+IHR
Sbjct: 151 GIIHR 155
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 198 LGSGSFGSVYEG-FTD---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
LG G FG VYEG +T+ + AVK +D ++ + E ++ +H +I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFM---SEAVIMKNLDHPHI 75
Query: 254 VQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNV 311
V+ G ++E +I +EL G L + + LK + Y+ QI + YL N
Sbjct: 76 VKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 312 IHR 314
+HR
Sbjct: 135 VHR 137
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 250 H--DNIVQYFGTEKDENKLYIFLELV--TQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE + Q I + L++ ++ WQ+L +++
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 130 CHNCGVLHR 138
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 17 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH 73
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLAK--------- 280
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 74 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 132
Query: 281 -------IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+Y+++ L + Y++Q+ G+++L + IHR
Sbjct: 133 VPYKPEDLYKDF-LTLEHLIXYSFQVAKGMEFLASRKXIHR 172
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKVV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L+++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ-MELDHERMSYLLYQMLVG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ G PLG G+FG V E G V L++ T
Sbjct: 15 LPYDASKWEFPRDRL---NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH 71
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLAK--------- 280
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 72 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF 130
Query: 281 -----IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+Y+++ L + Y++Q+ G+++L + IHR
Sbjct: 131 VPYKDLYKDF-LTLEHLIXYSFQVAKGMEFLASRKXIHR 168
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 6 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + E G+L+
Sbjct: 63 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF 121
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 122 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG VY+G DG +V+L+ + + Q + + E EI L H ++V
Sbjct: 47 IGHGVFGKVYKGVLRDG-----AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQ--------ILNGLKYLH 307
G + N++ + + + G+L + HL S + + +W+ GL YLH
Sbjct: 102 GFCDERNEMILIYKYMENGNLKR-----HLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 308 EQNVIHR 314
+ +IHR
Sbjct: 157 TRAIIHR 163
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 196 APLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
A LG G+FG V + D ++A+K++ E+ + + E+ LL H +V
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIR------HTEEKLSTILSEVXLLASLNHQYVV 65
Query: 255 QYFGT-------------EKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW---- 297
+Y+ K ++ L+I E +L + +L + Q Y W
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL-NQQRDEY-WRLFR 123
Query: 298 QILNGLKYLHEQNVIHR 314
QIL L Y+H Q +IHR
Sbjct: 124 QILEALSYIHSQGIIHR 140
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
+Q P+GSG+ G V + D A+K++S + Q + + +E+ L+
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLS---RPFQNQTHAKRAYRELVLMKVV 80
Query: 249 EHDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
H NI+ + L YI +EL+ +L+++ Q L ++S +Q+L G
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ-MELDHERMSYLLYQMLVG 138
Query: 303 LKYLHEQNVIHR 314
+K+LH +IHR
Sbjct: 139 IKHLHSAGIIHR 150
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 187 RRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLG 246
+R +++ +G+GSFG V++ + A+K+V LQD+ + +E+ ++
Sbjct: 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKRFKN--------RELQIMR 87
Query: 247 QFEHDNIV---QYF---GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQ----VSAYT 296
+H N+V +F G +KDE L + LE V + LK + + Y
Sbjct: 88 IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM 147
Query: 297 WQILNGLKYLHEQNVIHR 314
+Q+L L Y+H + HR
Sbjct: 148 YQLLRSLAYIHSIGICHR 165
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG VY+G DG +V+L+ + + Q + + E EI L H ++V
Sbjct: 47 IGHGVFGKVYKGVLRDG-----AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 258 GTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--AYTWQ--------ILNGLKYLH 307
G + N++ + + + G+L + HL S + + +W+ GL YLH
Sbjct: 102 GFCDERNEMILIYKYMENGNLKR-----HLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 308 EQNVIHR 314
+ +IHR
Sbjct: 157 TRAIIHR 163
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G+F V +EV+++ D+ S+ +L +E+ ++ H NIV+
Sbjct: 20 IGKGNFAKVKLA----RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 75
Query: 256 YFGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
F + E LY+ +E + G + + +K+ + + QI++ ++Y H++ ++HR
Sbjct: 76 LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 135
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 26/162 (16%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 6 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 62
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA---------- 279
E L E +I L+ H N+V G K L + E G+L+
Sbjct: 63 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF 121
Query: 280 ---KIYQEYHLKD----SQVSAYTWQILNGLKYLHEQNVIHR 314
K+ E KD + Y++Q+ G+++L + IHR
Sbjct: 122 VPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 163
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G +A K ++ + + Q +LE+E + +H NIV+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 86
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +E Y+ +LVT G L + + +EY+ ++ S QIL + + H+ V+HR
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYY-SEADASHCIQQILEAVLHCHQMGVVHR 145
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 22/153 (14%)
Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
NEK+ + Q G LG+G+FG V E G + V L+ E+ L
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 238 LEQEI-SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQE----------YH 286
E +I S LGQ H+NIV G + + E G L + +
Sbjct: 98 SELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 287 LKDSQVSA-----YTWQILNGLKYLHEQNVIHR 314
+ +S +S ++ Q+ G+ +L +N IHR
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHR 188
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG++GSV G A+K++S + Q E + +E+ LL +H+N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS---RPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 257 FGTEKDENKLYIFLEL-----VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
+ L F + Q L KI + ++ +Q+L GLKY+H V
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQTDLQKI-MGMEFSEEKIQYLVYQMLKGLKYIHSAGV 165
Query: 312 IHR---PG 316
+HR PG
Sbjct: 166 VHRDLKPG 173
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 15/135 (11%)
Query: 191 SWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
W+ LG+G FG V D G A+K+ + E+ L EI ++ +
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL----EIQIMKKLN 70
Query: 250 HDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYH----LKDSQVSAYTWQI 299
H N+V KL + +E G L K ++ LK+ + I
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 300 LNGLKYLHEQNVIHR 314
+ L+YLHE +IHR
Sbjct: 131 SSALRYLHENRIIHR 145
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+GSG++GSV G A+K++S + Q E + +E+ LL +H+N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS---RPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 257 FGTEKDENKLYIFLEL-----VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNV 311
+ L F + Q L KI + ++ +Q+L GLKY+H V
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQTDLQKI-MGLKFSEEKIQYLVYQMLKGLKYIHSAGV 147
Query: 312 IHR---PG 316
+HR PG
Sbjct: 148 VHRDLKPG 155
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 15/135 (11%)
Query: 191 SWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
W+ LG+G FG V D G A+K+ + E+ L EI ++ +
Sbjct: 16 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL----EIQIMKKLN 71
Query: 250 HDNIVQYFGTEKDENKL------YIFLELVTQGSLAKIYQEYH----LKDSQVSAYTWQI 299
H N+V KL + +E G L K ++ LK+ + I
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 300 LNGLKYLHEQNVIHR 314
+ L+YLHE +IHR
Sbjct: 132 SSALRYLHENRIIHR 146
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 158 CHNCGVLHR 166
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 126 CHNXGVLHR 134
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
NEK+ + Q G LG+G+FG V E G + V L+ E+ L
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 238 LEQEI-SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQE----------YH 286
E +I S LGQ H+NIV G + + E G L + +
Sbjct: 98 SELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 287 LKDSQVSA-----YTWQILNGLKYLHEQNVIHR 314
+ +S S ++ Q+ G+ +L +N IHR
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHR 188
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 145 CHNCGVLHR 153
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 146 CHNCGVLHR 154
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 158 CHNCGVLHR 166
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 145 CHNCGVLHR 153
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 173 CHNCGVLHR 181
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 159 CHNCGVLHR 167
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 158 CHNCGVLHR 166
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 158 CHNCGVLHR 166
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 159 CHNCGVLHR 167
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 201 GSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT 259
G FG V++ +D F AVK LQD+ + Q E+EI +H+N++Q+
Sbjct: 26 GRFGCVWKAQLMND--FVAVKIFPLQDKQS------WQSEREIFSTPGMKHENLLQFIAA 77
Query: 260 EKDENKLYIFLELVT----QGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
EK + L + L L+T +GSL + + +++ + GL YLHE
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHE 130
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 159 CHNCGVLHR 167
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 130 CHNCGVLHR 138
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 131 CHNCGVLHR 139
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 146 CHNCGVLHR 154
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 146 CHNCGVLHR 154
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LGSG FG+V++G + +G + + G QS + + +G +H +IV+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 257 FGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAYTW--QILNGLKYLHEQN 310
G + L+LVTQ GSL +++ W QI G+ YL E
Sbjct: 99 LGLCPGSS-----LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 311 VIHR 314
++HR
Sbjct: 154 MVHR 157
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 118 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 178 CHNCGVLHR 186
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LGSG FG+V++G + +G + + G QS + + +G +H +IV+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 257 FGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAYTW--QILNGLKYLHEQN 310
G + L+LVTQ GSL +++ W QI G+ YL E
Sbjct: 81 LGLCPGSS-----LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 311 VIHR 314
++HR
Sbjct: 136 MVHR 139
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 131 CHNCGVLHR 139
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 159 CHNCGVLHR 167
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+F V G +A K ++ + + Q +LE+E + +H NIV+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ---KLEREARICRLLKHSNIVRL 68
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +E Y+ +LVT G L + + +EY+ ++ S QIL + + H+ V+HR
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYY-SEADASHCIQQILEAVLHCHQMGVVHR 127
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G +A K ++ + + Q +LE+E + +H NIV+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 68
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +E Y+ +LVT G L + + +EY+ ++ S QIL + + H ++HR
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYY-SEADASHCIQQILESVNHCHLNGIVHR 127
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 314 R 314
R
Sbjct: 135 R 135
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 165 CHNCGVLHR 173
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGFTDDGF-FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V +A K ++ + + Q +LE+E + +H NIV+
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 95
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +E Y+ +LVT G L + + +EY+ ++ S QIL + ++H+ +++HR
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDIVAREYY-SEADASHCIHQILESVNHIHQHDIVHR 154
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 173 CHNCGVLHR 181
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 129 CHNCGVLHR 137
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ--- 247
++ A +G G++G+VY+ G F A+K V + + G G + +E++LL +
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 248 FEHDNIVQYF---GTEKD--ENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQIL 300
FEH N+V+ T + E K+ + E V Q + L + Q L
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 301 NGLKYLHEQNVIHR 314
GL +LH ++HR
Sbjct: 131 RGLDFLHANCIVHR 144
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 126 CHNCGVLHR 134
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 314 R 314
R
Sbjct: 135 R 135
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 314 R 314
R
Sbjct: 145 R 145
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G+F V G +A K ++ + + Q +LE+E + +H NIV+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 68
Query: 257 FGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +E Y+ +LVT G L + + +EY+ ++ S QIL + + H ++HR
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYY-SEADASHCIQQILESVNHCHLNGIVHR 127
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 314 R 314
R
Sbjct: 135 R 135
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 198 LGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G+GS+G + DG KE+ D G+ E L E++LL + +H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 257 FG--TEKDENKLYIFLELVTQGSLAKI 281
+ ++ LYI +E G LA +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASV 97
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 198 LGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G+GS+G + DG KE+ D G+ E L E++LL + +H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 257 FG--TEKDENKLYIFLELVTQGSLAKI 281
+ ++ LYI +E G LA +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASV 97
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 80 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 314 R 314
R
Sbjct: 139 R 139
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 314 R 314
R
Sbjct: 145 R 145
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 198 LGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G+GS+G + DG KE+ D G+ E L E++LL + +H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKEL---DYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 257 FG--TEKDENKLYIFLELVTQGSLAKI 281
+ ++ LYI +E G LA +
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASV 97
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 153 CHNCGVLHR 161
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
LG GSFG V G D G +V L+ +++ +E++ + +H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+G + + EL GSL +++ H +S Y Q+ G+ YL + IH
Sbjct: 80 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 314 R 314
R
Sbjct: 139 R 139
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 126 CHNCGVLHR 134
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG FG V+ G+ + A+K + +G E+ ++ E ++ + H +VQ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 68
Query: 258 GTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G ++ + + E + G L+ Q + + G+ YL E +VIHR
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 198 LGSGSFG------SVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG G+F V G K++S +D +LE+E + +H
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ--------KLEREARICRLLKHP 70
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAK--IYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ + +E Y+ +LVT G L + + +EY+ ++ S QIL + + H+
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY-SEADASHCIQQILEAVLHCHQM 129
Query: 310 NVIHR 314
V+HR
Sbjct: 130 GVVHR 134
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQFE 249
+Q G LGSG FGSVY G D A+K V GE + ++ E+ LL +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 250 H--DNIVQYFGTEKDENKLYIFLEL--VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKY 305
+++ + + + LE Q I + L++ ++ WQ+L +++
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 306 LHEQNVIHR 314
H V+HR
Sbjct: 131 CHNCGVLHR 139
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 31/149 (20%)
Query: 195 GAPLGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G LG G FG V + + V L++ + E + L E ++L Q H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVNH 85
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH------------------------ 286
++++ +G + L + +E GSL +E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 287 -LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L + ++ WQI G++YL E +++HR
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHR 174
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 35/141 (24%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G FG V+E D +A+K + L ++ E+ + +E+ L + EH IV+Y
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM----REVKALAKLEHPGIVRY 68
Query: 257 FGTEKDEN----------KLYIFLELVTQGSLAKIYQEYHLKDSQVSAYT---------- 296
F ++N K+Y+++++ ++ ++ +LKD T
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQM-------QLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 297 ---WQILNGLKYLHEQNVIHR 314
QI +++LH + ++HR
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHR 142
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 31/149 (20%)
Query: 195 GAPLGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G LG G FG V + + V L++ + E + L E ++L Q H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVNH 85
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH------------------------ 286
++++ +G + L + +E GSL +E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 287 -LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L + ++ WQI G++YL E ++HR
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHR 174
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG FG V+ G+ + A+K + +G E+ ++ E ++ + H +VQ +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 66
Query: 258 GTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G ++ + + E + G L+ Q + + G+ YL E VIHR
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQF-EHDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTW 297
+EI +L ++ +H NI+ D +Y+ EL+ G L KI ++ + + SA +
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLF 123
Query: 298 QILNGLKYLHEQNVIHR 314
I ++YLH Q V+HR
Sbjct: 124 TITKTVEYLHAQGVVHR 140
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 31/149 (20%)
Query: 195 GAPLGSGSFGSVYEG----FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G LG G FG V + + V L++ + E + L E ++L Q H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVNH 85
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYH------------------------ 286
++++ +G + L + +E GSL +E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 287 -LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L + ++ WQI G++YL E ++HR
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHR 174
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG FG V+ G+ + A+K + +G E+ ++ E ++ + H +VQ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 68
Query: 258 GTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G ++ + + E + G L+ Q + + G+ YL E VIHR
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSV-LQLEQEISLLGQ-- 247
++ A +G G++G+VY+ G F A+K V + + GE+ + + +E++LL +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN----GEEGLPISTVREVALLRRLE 61
Query: 248 -FEHDNIVQYF---GTEKD--ENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQI 299
FEH N+V+ T + E K+ + E V Q + L + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 300 LNGLKYLHEQNVIHR 314
L GL +LH ++HR
Sbjct: 122 LRGLDFLHANCIVHR 136
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG FG V+ G+ + A+K + +G E+ ++ E ++ + H +VQ +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 71
Query: 258 GTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G ++ + + E + G L+ Q + + G+ YL E VIHR
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 130
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSV-LQLEQEISLLGQ-- 247
++ A +G G++G+VY+ G F A+K V + + GE+ + + +E++LL +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN----GEEGLPISTVREVALLRRLE 61
Query: 248 -FEHDNIVQYF---GTEKD--ENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQI 299
FEH N+V+ T + E K+ + E V Q + L + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 300 LNGLKYLHEQNVIHR 314
L GL +LH ++HR
Sbjct: 122 LRGLDFLHANCIVHR 136
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG+GSFG V+ + +G ++A+K L+ + + V E +L H I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMK--VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQNVIHR 314
+GT +D ++++ ++ + G L + ++ + V+ Y ++ L+YLH +++I+R
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G+G F V G A+K + D+ T G + +++ EI L H +I Q
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGS-DLPRIKTEIEALKNLRHQHICQL 73
Query: 257 FGTEKDENKLYIFLELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + NK+++ LE G L I + L + + QI++ + Y+H Q HR
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHR 132
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 201 GSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE 260
G FG V++ + + AVK +QD+ + Q E E+ L +H+NI+Q+ G E
Sbjct: 35 GRFGCVWKAQLLNEYV-AVKIFPIQDKQS------WQNEYEVYSLPGMKHENILQFIGAE 87
Query: 261 KDENKLYIFLELVT----QGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
K + + L L+T +GSL+ + + +++ + GL YLHE
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHE 139
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 172 LMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQ 230
+M L + +E+ R+ + +Q G G+FG+V G G A+K+V +QD +
Sbjct: 5 MMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFR 63
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQ---YFGTEKDENKLYIFLELVTQ---GSLAKIYQE 284
+ LQ+ Q++++L H NIVQ YF T + ++ I+L +V + +L + +
Sbjct: 64 NRE--LQIMQDLAVL---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRN 118
Query: 285 YHLKDSQ-----VSAYTWQILNGLKYLH--EQNVIHR 314
Y+ + + + +Q++ + LH NV HR
Sbjct: 119 YYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHR 155
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSV-LQLEQEISLLGQ-- 247
++ A +G G++G+VY+ G F A+K V + + GE+ + + +E++LL +
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN----GEEGLPISTVREVALLRRLE 61
Query: 248 -FEHDNIVQYF---GTEKD--ENKLYIFLELVTQGSLAKI--YQEYHLKDSQVSAYTWQI 299
FEH N+V+ T + E K+ + E V Q + L + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 300 LNGLKYLHEQNVIHR 314
L GL +LH ++HR
Sbjct: 122 LRGLDFLHANCIVHR 136
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQ 298
E S++GQF+H NI+ G + I E + GSL ++ + + Q+
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 139
Query: 299 ILNGLKYLHEQNVIHR 314
I +G+KYL + + +HR
Sbjct: 140 IGSGMKYLSDMSAVHR 155
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 18/149 (12%)
Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
NEK+ + Q G LG+G+FG V E G + V L+ E+ L
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 238 LEQEI-SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD------- 289
E +I S LGQ H+NIV G + + E G L + D
Sbjct: 98 SELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 290 ----SQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++ Q+ G+ +L +N IHR
Sbjct: 156 PLELRDLLHFSSQVAQGMAFLASKNCIHR 184
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG FG V+ G+ + A+K + +G+ E ++ E ++ + H +VQ +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSEDDFIE---EAEVMMKLSHPKLVQLY 88
Query: 258 GTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G ++ + + E + G L+ Q + + G+ YL E VIHR
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 147
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
G +G G FG VY G + + L D E + ++E+ Q H+N+V
Sbjct: 38 GELIGKGRFGQVYHGR-----WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYHL-----KDSQVSAYTWQILNGLKYLHEQ 309
+ G L I L +L + ++ + K Q++ +I+ G+ YLH +
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ---EIVKGMGYLHAK 149
Query: 310 NVIHR 314
++H+
Sbjct: 150 GILHK 154
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 94
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 152
Query: 311 VIHR 314
+HR
Sbjct: 153 FVHR 156
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 18/149 (12%)
Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
NEK+ + Q G LG+G+FG V E G + V L+ E+ L
Sbjct: 30 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 238 LEQEI-SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKD------- 289
E +I S LGQ H+NIV G + + E G L + D
Sbjct: 90 SELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 290 ----SQVSAYTWQILNGLKYLHEQNVIHR 314
+ ++ Q+ G+ +L +N IHR
Sbjct: 148 PLELRDLLHFSSQVAQGMAFLASKNCIHR 176
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GSFG V + F+AVK + + + E+ + E+ + LL +H +V
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVGL 104
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLK------DSQVSAYTWQILNGLKYLHEQN 310
+ + +KLY L+ + G L YHL+ + + Y +I + L YLH N
Sbjct: 105 HFSFQTADKLYFVLDYINGGELF-----YHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 311 VIHR 314
+++R
Sbjct: 160 IVYR 163
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
+R M +++ +GSG FG V++ DG + +K V ++ + E+E+
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE---------KAEREVKA 57
Query: 245 LGQFEHDNIVQYFG-----------TEKDENK-----LYIFLELVTQGSLAK-IYQEYHL 287
L + +H NIV Y G + K+ ++ L+I +E +G+L + I +
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 288 KDSQVSAYTW--QILNGLKYLHEQNVIHR 314
K +V A QI G+ Y+H + +I+R
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINR 146
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
+VQ F +D+ LY+ +E + G L + Y + + YT +++ L +H +I
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLI 196
Query: 313 HR 314
HR
Sbjct: 197 HR 198
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG FG V+ G+ + A+K + +G E+ ++ E ++ + H +VQ +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 69
Query: 258 GTEKDENKLYIFLELVTQGSLAKIY--QEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
G ++ + + E + G L+ Q + + G+ YL E VIHR
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 92
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 150
Query: 311 VIHR 314
+HR
Sbjct: 151 FVHR 154
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 87
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 145
Query: 311 VIHR 314
+HR
Sbjct: 146 FVHR 149
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 114
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 172
Query: 311 VIHR 314
+HR
Sbjct: 173 FVHR 176
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 113
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 171
Query: 311 VIHR 314
+HR
Sbjct: 172 FVHR 175
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 95
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 153
Query: 311 VIHR 314
+HR
Sbjct: 154 FVHR 157
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 94
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 152
Query: 311 VIHR 314
+HR
Sbjct: 153 FVHR 156
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 90
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 148
Query: 311 VIHR 314
+HR
Sbjct: 149 FVHR 152
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 95
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 153
Query: 311 VIHR 314
+HR
Sbjct: 154 FVHR 157
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQF-EHDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTW 297
+EI +L ++ +H NI+ D +Y+ EL G L KI ++ + + SA +
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLF 123
Query: 298 QILNGLKYLHEQNVIHR 314
I ++YLH Q V+HR
Sbjct: 124 TITKTVEYLHAQGVVHR 140
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 93
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+KYL +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKYLASKK 151
Query: 311 VIHR 314
+HR
Sbjct: 152 FVHR 155
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 196 APLGSGSFGSVYEGFTDDG-----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
+PLGSG+FG V+ + F KE L+D + + + ++ EI++L + EH
Sbjct: 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIE-DPKLGKVTLEIAILSRVEH 88
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLK-DSQVSAYTW-QILNGLKYLHE 308
NI++ +++ + +E G + + H + D +++Y + Q+++ + YL
Sbjct: 89 ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL 148
Query: 309 QNVIHR 314
+++IHR
Sbjct: 149 KDIIHR 154
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 18 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 137 AYLNANKFVHR 147
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 210 FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIF 269
+ G + V+ ++L+ + V L+ E+ + F H NIV Y T +N+L++
Sbjct: 32 YKPTGEYVTVRRINLE---ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 88
Query: 270 LELVTQGSLAKIYQEYHLKDSQ---VSAYTWQ-ILNGLKYLHEQNVIHR 314
+ GS AK H D AY Q +L L Y+H +HR
Sbjct: 89 TSFMAYGS-AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHR 136
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTW 297
E S++GQF+H NI+ G + I E + GSL ++ + + Q+
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 117
Query: 298 QILNGLKYLHEQNVIHR 314
I +G+KYL + + +HR
Sbjct: 118 GIGSGMKYLSDMSYVHR 134
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 220 KEVSLQ--DQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGS 277
KEV+++ D+ S+ +L +E+ + H NIV+ F + E LY+ E + G
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 278 LAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ + K+ + A QI++ ++Y H++ ++HR
Sbjct: 100 VFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHR 137
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 241 EISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQ 298
E S++GQF+H NI+ G + I E + GSL ++ + + Q+
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 124
Query: 299 ILNGLKYLHEQNVIHR 314
I +G+KYL + + +HR
Sbjct: 125 IGSGMKYLSDMSYVHR 140
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 241 EISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQ 298
E S++GQF+H N+V G + I +E + G+L +++ Q+
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG 153
Query: 299 ILNGLKYLHEQNVIHR 314
I G++YL + +HR
Sbjct: 154 IAAGMRYLADMGYVHR 169
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 27 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 146 AYLNANKFVHR 156
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 210 FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIF 269
+ G + V+ ++L+ + V L+ E+ + F H NIV Y T +N+L++
Sbjct: 48 YKPTGEYVTVRRINLE---ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104
Query: 270 LELVTQGSLAKIYQEYHLKDSQ---VSAYTWQ-ILNGLKYLHEQNVIHR 314
+ GS AK H D AY Q +L L Y+H +HR
Sbjct: 105 TSFMAYGS-AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHR 152
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 26 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 145 AYLNANKFVHR 155
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 33 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 152 AYLNANKFVHR 162
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 24 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 143 AYLNANKFVHR 153
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEGFTDDG-FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G GS+G VY + + A+K+V+ + + +L+ EI++L + + D I++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR---EITILNRLKSDYIIRL 90
Query: 257 FGTEKDEN-----KLYIFLELVTQGSLAKIYQ-EYHLKDSQVSAYTWQILNGLKYLHEQN 310
+ ++ +LYI LE + L K+++ L + + + +L G ++HE
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG 149
Query: 311 VIHR 314
+IHR
Sbjct: 150 IIHR 153
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 26 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 145 AYLNANKFVHR 155
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 20 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 139 AYLNANKFVHR 149
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 241 EISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQ 298
E S++GQF+H NI+ G + I E + GSL ++ Q+
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRG 132
Query: 299 ILNGLKYLHEQNVIHR 314
I G+KYL + +HR
Sbjct: 133 ISAGMKYLSDMGYVHR 148
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 20 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 139 AYLNANKFVHR 149
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 33 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + + ++ V A +I +G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 152 AYLNANKFVHR 162
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 23 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + + ++ V A +I +G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 142 AYLNANKFVHR 152
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
+VQ F +D+ LY+ +E + G L + Y + + YT +++ L +H I
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 313 HR 314
HR
Sbjct: 191 HR 192
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 154
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 212
Query: 311 VIHR 314
+HR
Sbjct: 213 FVHR 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
+VQ F +D+ LY+ +E + G L + Y + + YT +++ L +H I
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 313 HR 314
HR
Sbjct: 196 HR 197
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVI 312
+VQ F +D+ LY+ +E + G L + Y + + YT +++ L +H I
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 313 HR 314
HR
Sbjct: 196 HR 197
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 27 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 146 AYLNANKFVHR 156
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 96
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 154
Query: 311 VIHR 314
+HR
Sbjct: 155 FVHR 158
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSV---LQLEQEISLLGQFEHDNIV 254
LG GSFG VYEG G E + + S+ ++ E S++ +F ++V
Sbjct: 55 LGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 255 QYFGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSA---------YTWQILNGL 303
+ G + +EL+T+G L + ++++ V A +I +G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 304 KYLHEQNVIHR 314
YL+ +HR
Sbjct: 174 AYLNANKFVHR 184
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 93
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 151
Query: 311 VIHR 314
+HR
Sbjct: 152 FVHR 155
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 95
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 153
Query: 311 VIHR 314
+HR
Sbjct: 154 FVHR 157
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 95
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 153
Query: 311 VIHR 314
+HR
Sbjct: 154 FVHR 157
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 195 GAPLGSGSFGSVYEGFT--DDG--FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
G LG G FGSV EG +DG AVK + L D +Q E + + E + + F H
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL-DNSSQRE--IEEFLSEAACMKDFSH 95
Query: 251 DNIVQYFG-----TEKDENKLYIFLELVTQGSLAKIYQEY--------HLKDSQVSAYTW 297
N+++ G + + K + L + G L Y Y H+ + +
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL-HTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 298 QILNGLKYLHEQNVIHR 314
I G++YL +N +HR
Sbjct: 155 DIALGMEYLSNRNFLHR 171
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 194 KGAPLGSGSFGSVYEGFTDDGFF---FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
+G +G G++G VY+ DG +A+K++ +GT S + EI+LL + +H
Sbjct: 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACR---EIALLRELKH 77
Query: 251 DNIV---QYFGTEKD----------ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTW 297
N++ + F + D E+ L+ ++ K + L V + +
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANK--KPVQLPRGMVKSLLY 135
Query: 298 QILNGLKYLHEQNVIHR 314
QIL+G+ YLH V+HR
Sbjct: 136 QILDGIHYLHANWVLHR 152
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 96
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 154
Query: 311 VIHR 314
+HR
Sbjct: 155 FVHR 158
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G G FG VY G +DG SL GE S Q E ++ F H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNVLS 100
Query: 256 YFG-TEKDENKLYIFLELVTQGSLAK-IYQEYH---LKDSQVSAYTWQILNGLKYLHEQN 310
G + E + L + G L I E H +KD + + Q+ G+K+L +
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMKFLASKK 158
Query: 311 VIHR 314
+HR
Sbjct: 159 FVHR 162
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG V G G AVK +++ T Q+ L E S++ Q H N+VQ
Sbjct: 14 IGKGEFGDVMLG-DYRGNKVAVK--CIKNDATA--QAFLA---EASVMTQLRHSNLVQLL 65
Query: 258 GTEKDE-NKLYIFLELVTQGSLAKIYQEYH---LKDSQVSAYTWQILNGLKYLHEQNVIH 313
G +E LYI E + +GSL + L + ++ + ++YL N +H
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 314 R 314
R
Sbjct: 126 R 126
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG V G G AVK + + + + E S++ Q H N+VQ
Sbjct: 20 IGKGEFGDVMLG-DYRGNKVAVKCI-------KNDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 258 GTEKDE-NKLYIFLELVTQGSLAKIYQEYH---LKDSQVSAYTWQILNGLKYLHEQNVIH 313
G +E LYI E + +GSL + L + ++ + ++YL N +H
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 314 R 314
R
Sbjct: 132 R 132
>pdb|2L1W|B Chain B, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 25
Score = 36.6 bits (83), Expect = 0.017, Method: Composition-based stats.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 23 RRWRSFCTIVKNPTRRFRMVANL 45
+RWRS +IVKN RRFRM++NL
Sbjct: 3 QRWRSSVSIVKNRARRFRMISNL 25
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 42/162 (25%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
+R M +++ +GSG FG V++ DG + ++ V ++ + E+E+
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE---------KAEREVKA 58
Query: 245 LGQFEHDNIVQYFGT----------------------EKDENK-------LYIFLELVTQ 275
L + +H NIV Y G E +N L+I +E +
Sbjct: 59 LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 276 GSLAK-IYQEYHLKDSQVSAYTW--QILNGLKYLHEQNVIHR 314
G+L + I + K +V A QI G+ Y+H + +IHR
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHR 160
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG V G G AVK +++ T Q+ L E S++ Q H N+VQ
Sbjct: 29 IGKGEFGDVMLG-DYRGNKVAVK--CIKNDATA--QAFLA---EASVMTQLRHSNLVQLL 80
Query: 258 GTEKDE-NKLYIFLELVTQGSLAKIYQEYH---LKDSQVSAYTWQILNGLKYLHEQNVIH 313
G +E LYI E + +GSL + L + ++ + ++YL N +H
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 314 R 314
R
Sbjct: 141 R 141
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAV--KEVSLQD---QGTQGEQSVLQLEQEISLLGQFE 249
LG GSFG V T++ + + K+V +QD + T E+ VL L + L Q
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
+ ++LY +E V G L I Q K+ Q Y +I GL +LH+
Sbjct: 87 --------SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK 138
Query: 309 QNVIHR 314
+ +I+R
Sbjct: 139 RGIIYR 144
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 82
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 140 RRLVHR 145
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G FG V G G AVK + + + + E S++ Q H N+VQ
Sbjct: 201 IGKGEFGDVMLG-DYRGNKVAVKCI-------KNDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 258 GTEKDE-NKLYIFLELVTQGSLAKIYQEYH---LKDSQVSAYTWQILNGLKYLHEQNVIH 313
G +E LYI E + +GSL + L + ++ + ++YL N +H
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 314 R 314
R
Sbjct: 313 R 313
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LGSG+FG+VY+G + +G + ++ + ++ ++ E ++ ++ ++ +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHEQNVI 312
G + + + +L+ G L +E+ KD+ S Y W QI G+ YL ++ ++
Sbjct: 117 LGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLV 173
Query: 313 HR 314
HR
Sbjct: 174 HR 175
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 14/128 (10%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
++ G +GSGSFG +Y G TD A +EV+++ + + + L +E +I + Q
Sbjct: 9 YRLGRKIGSGSFGDIYLG-TD---IAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 64
Query: 252 -NIVQYFGTEKDENKLYIFLELVTQGSLAKIY----QEYHLKDSQVSAYTWQILNGLKYL 306
+++ G E D N + +EL+ SL ++ +++ LK + A Q+++ ++Y+
Sbjct: 65 IPTIRWCGAEGDYNVM--VMELLGP-SLEDLFNFCSRKFSLKTVLLLAD--QMISRIEYI 119
Query: 307 HEQNVIHR 314
H +N IHR
Sbjct: 120 HSKNFIHR 127
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 82
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 140 RRLVHR 145
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 241 EISLLGQFE-HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS------ 293
EI LL + + H N+++Y+ +E + LYI LEL +L + + ++ D +
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYN 134
Query: 294 --AYTWQILNGLKYLHEQNVIHR 314
+ QI +G+ +LH +IHR
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHR 157
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 80
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 138 RRLVHR 143
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 80
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 138 RRLVHR 143
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 78
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 79 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 136 RRLVHR 141
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 14/128 (10%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
++ G +GSGSFG +Y G TD A +EV+++ + + + L +E +I + Q
Sbjct: 11 YRLGRKIGSGSFGDIYLG-TD---IAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 66
Query: 252 -NIVQYFGTEKDENKLYIFLELVTQGSLAKIY----QEYHLKDSQVSAYTWQILNGLKYL 306
+++ G E D N + +EL+ SL ++ +++ LK + A Q+++ ++Y+
Sbjct: 67 IPTIRWCGAEGDYNVM--VMELLGP-SLEDLFNFCSRKFSLKTVLLLAD--QMISRIEYI 121
Query: 307 HEQNVIHR 314
H +N IHR
Sbjct: 122 HSKNFIHR 129
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 241 EISLLGQFE-HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS------ 293
EI LL + + H N+++Y+ +E + LYI LEL +L + + ++ D +
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYN 134
Query: 294 --AYTWQILNGLKYLHEQNVIHR 314
+ QI +G+ +LH +IHR
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHR 157
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 79
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 137 RRLVHR 142
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 81
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 82 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 139 RRLVHR 144
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+G G +G+VY+G D+ AVK S ++ Q+ + E+ I + EHDNI ++
Sbjct: 21 IGRGRYGAVYKGSLDER-PVAVKVFSFANR-----QNFIN-EKNIYRVPLMEHDNIARFI 73
Query: 258 -GTEK---DENKLYIF-LELVTQGSLAKIYQEYHLKDSQVSA-YTWQILNGLKYLHEQ 309
G E+ D Y+ +E GSL K Y H D S + GL YLH +
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLAYLHTE 130
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 80
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 138 RRLVHR 143
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 59/162 (36%), Gaps = 31/162 (19%)
Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
NEK+ + Q G LG+G+FG V E G + V L+ E+ L
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 238 LEQEI-SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQ---EYHLKDSQVS 293
E +I S LGQ H+NIV G + + E G L + E L S
Sbjct: 83 SELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP 140
Query: 294 A---------------------YTWQILNGLKYLHEQNVIHR 314
++ Q+ G+ +L +N IHR
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 182
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 241 EISLLGQFE-HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS------ 293
EI LL + + H N+++Y+ +E + LYI LEL +L + + ++ D +
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYN 116
Query: 294 --AYTWQILNGLKYLHEQNVIHR 314
+ QI +G+ +LH +IHR
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHR 139
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD-NIVQ 255
LG G++ V + +G +AVK + Q S ++ +E+ L Q + + NI++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIE-----KQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 256 YFGTEKDENKLYIFLELVTQGS-LAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+D+ + Y+ E + GS LA I ++ H + + S + L +LH + + HR
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 241 EISLLGQFE-HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS------ 293
EI LL + + H N+++Y+ +E + LYI LEL +L + + ++ D +
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYN 116
Query: 294 --AYTWQILNGLKYLHEQNVIHR 314
+ QI +G+ +LH +IHR
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHR 139
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 79
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGXLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 137 RRLVHR 142
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 33/167 (19%)
Query: 177 YNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQGE 232
Y + L ++ R + + G LGSG+FG V G + G V L+++ E
Sbjct: 34 YEYDLKWEFPRENLEF--GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE 91
Query: 233 QSVLQLEQEISLLGQF-EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQ 291
+ L E+ ++ Q H+NIV G +Y+ E G L + K S+
Sbjct: 92 REALM--SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 292 ------------------------VSAYTWQILNGLKYLHEQNVIHR 314
+ + +Q+ G+++L ++ +HR
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 173 MELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQD-QGTQ 230
+EL + ++N+ RI +G G FG VY D G +A+K + + + Q
Sbjct: 180 VELNIHLTMNDFSVHRI--------IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS 290
GE L +SL+ + IV +KL L+L+ G L YHL
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----HYHLSQH 286
Query: 291 QVSA------YTWQILNGLKYLHEQNVIHR 314
V + Y +I+ GL+++H + V++R
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 173 MELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQD-QGTQ 230
+EL + ++N+ RI +G G FG VY D G +A+K + + + Q
Sbjct: 180 VELNIHLTMNDFSVHRI--------IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS 290
GE L +SL+ + IV +KL L+L+ G L YHL
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----HYHLSQH 286
Query: 291 QVSA------YTWQILNGLKYLHEQNVIHR 314
V + Y +I+ GL+++H + V++R
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 173 MELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQD-QGTQ 230
+EL + ++N+ RI +G G FG VY D G +A+K + + + Q
Sbjct: 180 VELNIHLTMNDFSVHRI--------IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS 290
GE L +SL+ + IV +KL L+L+ G L YHL
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----HYHLSQH 286
Query: 291 QVSA------YTWQILNGLKYLHEQNVIHR 314
V + Y +I+ GL+++H + V++R
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 173 MELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQD-QGTQ 230
+EL + ++N+ RI +G G FG VY D G +A+K + + + Q
Sbjct: 179 VELNIHLTMNDFSVHRI--------IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 230
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS 290
GE L +SL+ + IV +KL L+L+ G L YHL
Sbjct: 231 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL-----HYHLSQH 285
Query: 291 QVSA------YTWQILNGLKYLHEQNVIHR 314
V + Y +I+ GL+++H + V++R
Sbjct: 286 GVFSEADMRFYAAEIILGLEHMHNRFVVYR 315
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQ 255
LG G++G V++ G AVK++ Q + Q + EI +L + H+NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR---EIMILTELSGHENIVN 73
Query: 256 YFGTEKDENKLYIFLEL-VTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ +N ++L + L + + L+ +Q++ +KYLH ++HR
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR 133
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG G FG V+ T + K V ++ G VL +++EIS+L H NI+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVL-VKKEISILNIARHRNILHL 66
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQNVIH- 313
+ + +L + E ++ + + + L + ++ +Y Q+ L++LH N+ H
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 314 --RP 315
RP
Sbjct: 127 DIRP 130
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 88
Query: 253 IVQYFGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAY--TW--QILNGLK 304
+ + G L ++L+TQ G L +E+ KD+ S Y W QI G+
Sbjct: 89 VCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMN 141
Query: 305 YLHEQNVIHR 314
YL ++ ++HR
Sbjct: 142 YLEDRRLVHR 151
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQF-EHDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTW 297
+EI +L ++ +H NI+ D +Y+ EL+ G L KI ++ + + S
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 298 QILNGLKYLHEQNVIHR 314
I ++YLH Q V+HR
Sbjct: 129 TIGKTVEYLHSQGVVHR 145
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+GSG+FG V D AVK + +GE+ +++EI H NIV+
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIE------RGEKIAANVKREIINHRSLRHPNIVR 79
Query: 256 YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ L I +E + G L +I + + + Q+++G+ Y H V HR
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 78
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 136 RRLVHR 141
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 72
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 73 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 130 RRLVHR 135
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 78
Query: 253 IVQYFGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAY--TW--QILNGLK 304
+ + G L ++L+TQ G L +E+ KD+ S Y W QI G+
Sbjct: 79 VCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMN 131
Query: 305 YLHEQNVIHR 314
YL ++ ++HR
Sbjct: 132 YLEDRRLVHR 141
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 80
Query: 253 IVQYFGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAY--TW--QILNGLK 304
+ + G L ++L+TQ G L +E+ KD+ S Y W QI G+
Sbjct: 81 VCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMN 133
Query: 305 YLHEQNVIHR 314
YL ++ ++HR
Sbjct: 134 YLEDRRLVHR 143
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 81
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 139 RRLVHR 144
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 85
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 143 RRLVHR 148
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 63
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 124 HKIMHR 129
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 78
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 136 RRLVHR 141
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 85
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 143 RRLVHR 148
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 81
Query: 253 IVQYFGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAY--TW--QILNGLK 304
+ + G L ++L+TQ G L +E+ KD+ S Y W QI G+
Sbjct: 82 VCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMN 134
Query: 305 YLHEQNVIHR 314
YL ++ ++HR
Sbjct: 135 YLEDRRLVHR 144
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 81
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 139 RRLVHR 144
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
+GSG+FG D + V ++G +++V ++EI H NIV++
Sbjct: 28 IGSGNFGVAR--LMRDKLTKELVAVKYIERGAAIDENV---QREIINHRSLRHPNIVRFK 82
Query: 258 GTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L I +E + G L +I + + + Q+L+G+ Y H + HR
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR 140
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 63
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-HLKDSQVSAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ + + + + ++ GL YL E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 124 HKIMHR 129
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 63
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY-HLKDSQVSAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ + + + + ++ GL YL E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 124 HKIMHR 129
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 90
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 151 HKIMHR 156
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 80
Query: 253 IVQYFGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAY--TW--QILNGLK 304
+ + G L ++L+TQ G L +E+ KD+ S Y W QI G+
Sbjct: 81 VCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMN 133
Query: 305 YLHEQNVIHR 314
YL ++ ++HR
Sbjct: 134 YLEDRRLVHR 143
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 84
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 85 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 142 RRLVHR 147
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQF-EHDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTW 297
+EI +L ++ +H NI+ D +Y+ EL+ G L KI ++ + + S
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 298 QILNGLKYLHEQNVIHR 314
I ++YLH Q V+HR
Sbjct: 129 TIGKTVEYLHSQGVVHR 145
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 75
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 76 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 133 RRLVHR 138
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 63
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 124 HKIMHR 129
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 63
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 124 HKIMHR 129
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 198 LGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G FG V+E D +A+K + L ++ E+ + +E+ L + EH IV+Y
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM----REVKALAKLEHPGIVRY 69
Query: 257 FGT 259
F
Sbjct: 70 FNA 72
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 125
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 186 HKIMHR 191
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 66
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 127 HKIMHR 132
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 103
Query: 253 IVQYFGTEKDENKLYIFLELVTQ----GSLAKIYQEYHLKDSQVSAY--TW--QILNGLK 304
+ + G L ++L+TQ G L +E+ KD+ S Y W QI G+
Sbjct: 104 VCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMN 156
Query: 305 YLHEQNVIHR 314
YL ++ ++HR
Sbjct: 157 YLEDRRLVHR 166
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
LGSG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEIL---DEAYVMASVDNPH 78
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGXLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 136 RRLVHR 141
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 198 LGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
LG+G+ G V + G A K + L+ + Q + +E+ +L + IV +
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII----RELQVLHECNSPYIVGF 79
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEY-HLKDSQVSAYTWQILNGLKYLHEQN-VIHR 314
+G + ++ I +E + GSL ++ +E + + + + +L GL YL E++ ++HR
Sbjct: 80 YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 139
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 241 EISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQ 298
E S++GQF+H NI++ G I E + GSL + + Q+
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 299 ILNGLKYLHEQNVIHR 314
+ G++YL + +HR
Sbjct: 160 VGAGMRYLSDLGYVHR 175
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 32/147 (21%)
Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
G LG+G+FG V E +D AVK + T+ E + +L + +S LG
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL-KVLSYLGN- 85
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--------------- 293
H NIV G + E G L + +DS +
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELAL 142
Query: 294 ------AYTWQILNGLKYLHEQNVIHR 314
++++Q+ G+ +L +N IHR
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHR 169
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 11/124 (8%)
Query: 198 LGSGSFGSVYEG-FTDDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
+G G FG VY G + D A+K +S + Q E + +E L+ H N+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFL----REGLLMRGLNHPNV 84
Query: 254 VQYFGTE-KDENKLYIFLELVTQGSLAKIYQEYHLKDS--QVSAYTWQILNGLKYLHEQN 310
+ G E ++ L + G L + + + + ++ Q+ G++YL EQ
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 311 VIHR 314
+HR
Sbjct: 145 FVHR 148
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 32/147 (21%)
Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
G LG+G+FG V E +D AVK + T+ E + +L + +S LG
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL-KVLSYLGN- 101
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--------------- 293
H NIV G + E G L + +DS +
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELAL 158
Query: 294 ------AYTWQILNGLKYLHEQNVIHR 314
++++Q+ G+ +L +N IHR
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHR 185
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 241 EISLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQ 298
E S++GQF+H NI++ G I E + GSL + + Q+
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 299 ILNGLKYLHEQNVIHR 314
+ G++YL + +HR
Sbjct: 160 VGAGMRYLSDLGYVHR 175
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQ---DQGTQGEQSVLQLEQEI 242
+R I + LG GSFG V + ++V+L+ Q + +++E+EI
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLA----THYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 243 SLLGQFEHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNG 302
S L H +I++ + + + +E I ++ + + + + QI+
Sbjct: 61 SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 303 LKYLHEQNVIHR 314
++Y H ++HR
Sbjct: 121 IEYCHRHKIVHR 132
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 192 WQKGAPLGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
++K + LG+G+ G V++ G A K + L+ + Q + +E+ +L +
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII----RELQVLHECNS 82
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQV-SAYTWQILNGLKYLHEQ 309
IV ++G + ++ I +E + GSL ++ ++ Q+ + ++ GL YL E+
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 310 N-VIHR 314
+ ++HR
Sbjct: 143 HKIMHR 148
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 195 GAPLGSGSFGSVYEG--FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
G LG G FGSV E +DG F V V + + + +E + + +F+H +
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVA-VKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 253 IVQYFGT---EKDENKLYI---FLELVTQGSLAKIY-------QEYHLKDSQVSAYTWQI 299
+ + G + + +L I L + G L ++L + + I
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 300 LNGLKYLHEQNVIHR 314
G++YL +N IHR
Sbjct: 147 ACGMEYLSSRNFIHR 161
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 8 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 64
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 65 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 113
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 15 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 71
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 72 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 32/147 (21%)
Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
G LG+G+FG V E +D AVK + T+ E + +L + +S LG
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL-KVLSYLGN- 103
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--------------- 293
H NIV G + E G L + +DS +
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELAL 160
Query: 294 ------AYTWQILNGLKYLHEQNVIHR 314
++++Q+ G+ +L +N IHR
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHR 187
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 17 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 73
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 74 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYE----GFTDDGFFFAVKEVSLQDQGTQ 230
L Y+ S E R R+ + G PLG G+FG V E G V L++ T
Sbjct: 10 LPYDASKWEFPRDRL---KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH 66
Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT-EKDENKLYIFLELVTQGSLA 279
E L E +I L+ H N+V G K L + +E G+L+
Sbjct: 67 SEHRALMSELKI-LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
+ G LG+GSFG V E F + G FA+K+V LQD + +E+ ++ +H
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKV-LQDPRYK--------NRELDIMKVLDH 59
Query: 251 DNIVQ---YFGTEKDE 263
NI++ YF T DE
Sbjct: 60 VNIIKLVDYFYTTGDE 75
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 32/147 (21%)
Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
G LG+G+FG V E +D AVK + T+ E + +L + +S LG
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL-KVLSYLGN- 108
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--------------- 293
H NIV G + E G L + +DS +
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELAL 165
Query: 294 ------AYTWQILNGLKYLHEQNVIHR 314
++++Q+ G+ +L +N IHR
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHR 192
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
L SG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILD---EAYVMASVDNPH 85
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + ++L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 86 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 143 RRLVHR 148
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 80
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS-----------QVSAYTWQIL 300
++V+ G + +EL+ G L + + ++ +I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 301 NGLKYLHEQNVIHR 314
+G+ YL+ + +HR
Sbjct: 141 DGMAYLNAKKFVHR 154
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 32/147 (21%)
Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
G LG+G+FG V E +D AVK + T+ E + +L + +S LG
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL-KVLSYLGN- 108
Query: 249 EHDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVS--------------- 293
H NIV G + E G L + +DS +
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELAL 165
Query: 294 ------AYTWQILNGLKYLHEQNVIHR 314
++++Q+ G+ +L +N IHR
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHR 192
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQFE-HDNIVQYFGTEKDENKLYIFLELVTQGS-LAKIYQEYHLKDSQVSAYTW 297
+E+ +L Q + H N+++ ++E++ Y+ E + GS L+ I++ H + + S
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ 118
Query: 298 QILNGLKYLHEQNVIHR 314
+ + L +LH + + HR
Sbjct: 119 DVASALDFLHNKGIAHR 135
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 77
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS-----------QVSAYTWQIL 300
++V+ G + +EL+ G L + + ++ +I
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 301 NGLKYLHEQNVIHR 314
+G+ YL+ + +HR
Sbjct: 138 DGMAYLNAKKFVHR 151
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 240 QEISLLGQFE-HDNIVQYFGTEKDENKLYIFLELVTQGS-LAKIYQEYHLKDSQVSAYTW 297
+E+ +L Q + H N+++ ++E++ Y+ E + GS L+ I++ H + + S
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ 118
Query: 298 QILNGLKYLHEQNVIHR 314
+ + L +LH + + HR
Sbjct: 119 DVASALDFLHNKGIAHR 135
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 23/143 (16%)
Query: 191 SWQKGAPLGSGSFGSVY-------EGFTDDGFFFAVKEVSLQDQGT--------QGEQSV 235
+W+ G P+G G FG +Y E D V +V D G Q
Sbjct: 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDA--PCVVKVEPSDNGPLFTELKFYQRAAKP 93
Query: 236 LQLEQEISLLGQFEHDNIVQYFGTE-KDEN-KLYIFLELVTQGS-LAKIYQEYHLKDSQ- 291
Q+++ I + ++ + +Y+G+ D+N K Y F+ + GS L KIY+ + S+
Sbjct: 94 EQIQKWIRTR-KLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRK 152
Query: 292 -VSAYTWQILNGLKYLHEQNVIH 313
V + +IL+ L+Y+HE +H
Sbjct: 153 TVLQLSLRILDILEYIHEHEYVH 175
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 80
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS-----------QVSAYTWQIL 300
++V+ G + +EL+ G L + + ++ +I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 301 NGLKYLHEQNVIHR 314
+G+ YL+ + +HR
Sbjct: 141 DGMAYLNAKKFVHR 154
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 25/132 (18%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN----- 252
LG+G++G V F V+++S D G VL+ + EH
Sbjct: 62 LGTGAYGKV----------FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 253 ---------IVQYFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNG 302
+V + E KL++ L+ + G L + Q + +V Y +I+
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 303 LKYLHEQNVIHR 314
L++LH+ +I+R
Sbjct: 172 LEHLHKLGIIYR 183
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 79
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS-----------QVSAYTWQIL 300
++V+ G + +EL+ G L + + ++ +I
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 301 NGLKYLHEQNVIHR 314
+G+ YL+ + +HR
Sbjct: 140 DGMAYLNAKKFVHR 153
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 80
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS-----------QVSAYTWQIL 300
++V+ G + +EL+ G L + + ++ +I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 301 NGLKYLHEQNVIHR 314
+G+ YL+ + +HR
Sbjct: 141 DGMAYLNAKKFVHR 154
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 80
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS-----------QVSAYTWQIL 300
++V+ G + +EL+ G L + + ++ +I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 301 NGLKYLHEQNVIHR 314
+G+ YL+ + +HR
Sbjct: 141 DGMAYLNAKKFVHR 154
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 27/137 (19%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 80
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--------------QVSAYTW 297
++V+ G + +EL+ G L + + Q++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA--- 137
Query: 298 QILNGLKYLHEQNVIHR 314
+I +G+ YL+ + +HR
Sbjct: 138 EIADGMAYLNAKKFVHR 154
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 192 WQKGAPLGSGSFGSVY-------EGFTDDGFFFAVKEVSLQDQGT--------QGEQSVL 236
W+ G P+G G FG +Y E D V +V D G Q
Sbjct: 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDA--PCVVKVEPSDNGPLFTELKFYQRAAKPE 94
Query: 237 QLEQEISLLGQFEHDNIVQYFGTE-KDEN-KLYIFLELVTQGS-LAKIYQEYHLKDSQ-- 291
Q+++ I + ++ + +Y+G+ D+N K Y F+ + GS L KIY+ + S+
Sbjct: 95 QIQKWIRTR-KLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKT 153
Query: 292 VSAYTWQILNGLKYLHEQNVIH 313
V + +IL+ L+Y+HE +H
Sbjct: 154 VLQLSLRILDILEYIHEHEYVH 175
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 27/137 (19%)
Query: 198 LGSGSFGSVYEGFTDDGF------FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
LG GSFG VYEG D AVK V+ + + E+ ++ E S++ F
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRER--IEFLNEASVMKGFTCH 81
Query: 252 NIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDS--------------QVSAYTW 297
++V+ G + +EL+ G L + + Q++A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA--- 138
Query: 298 QILNGLKYLHEQNVIHR 314
+I +G+ YL+ + +HR
Sbjct: 139 EIADGMAYLNAKKFVHR 155
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 192 WQKGAPLGSGSFGSVY-------EGFTDDGFFFAVKEVSLQDQGT--------QGEQSVL 236
W+ G P+G G FG +Y E D V +V D G Q
Sbjct: 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDA--PCVVKVEPSDNGPLFTELKFYQRAAKPE 94
Query: 237 QLEQEISLLGQFEHDNIVQYFGTE-KDEN-KLYIFLELVTQGS-LAKIYQEYHLKDSQ-- 291
Q+++ I + ++ + +Y+G+ D+N K Y F+ + GS L KIY+ + S+
Sbjct: 95 QIQKWIRTR-KLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKT 153
Query: 292 VSAYTWQILNGLKYLHEQNVIH 313
V + +IL+ L+Y+HE +H
Sbjct: 154 VLQLSLRILDILEYIHEHEYVH 175
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+GSG+FG V D AVK + +GE+ +++EI H NIV+
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 256 YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ L I +E + G L +I + + + Q+++G+ Y H V HR
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+GSG+FG V D AVK + +GE+ +++EI H NIV+
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 256 YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ L I +E + G L +I + + + Q+++G+ Y H V HR
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTD--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+GSG+FG V D AVK + +GE+ +++EI H NIV+
Sbjct: 26 IGSGNFG-VARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRHPNIVR 78
Query: 256 YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ L I +E + G L +I + + + Q+++G+ Y H V HR
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 138
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
S+Q+ + LG GS+G V++ + +DG +AVK +G + L +GQ
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ-- 115
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLH 307
H V+ ++ LY+ EL SL + + + L ++QV Y L L +LH
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 308 EQNVIH 313
Q ++H
Sbjct: 175 SQGLVH 180
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
L SG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILD---EAYVMASVDNPH 78
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 136 RRLVHR 141
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+F V G +A+K ++ D +GE S + E+++ + G + I Q
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG--DRRWITQL 126
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEY--HLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+DEN LY+ +E G L + ++ + Y +I+ + +H +HR
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 198 LGSGSFGSVYEG-FTDDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
L SG+FG+VY+G + +G A+KE+ + + + +L E ++ ++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILD---EAYVMASVDNPH 85
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAY--TW--QILNGLKYLHE 308
+ + G + + + +L+ G L +E+ KD+ S Y W QI G+ YL +
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 309 QNVIHR 314
+ ++HR
Sbjct: 143 RRLVHR 148
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
H +V + E++L+ +E V G L + ++ L + Y+ +I L YLHE
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 309 QNVIHR 314
+ +I+R
Sbjct: 140 RGIIYR 145
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 19/20 (95%)
Query: 295 YTWQILNGLKYLHEQNVIHR 314
YT QI++GL++LH++N+I+R
Sbjct: 294 YTAQIVSGLEHLHQRNIIYR 313
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 19/20 (95%)
Query: 295 YTWQILNGLKYLHEQNVIHR 314
YT QI++GL++LH++N+I+R
Sbjct: 294 YTAQIVSGLEHLHQRNIIYR 313
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 19/20 (95%)
Query: 295 YTWQILNGLKYLHEQNVIHR 314
YT QI++GL++LH++N+I+R
Sbjct: 294 YTAQIVSGLEHLHQRNIIYR 313
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 19/20 (95%)
Query: 295 YTWQILNGLKYLHEQNVIHR 314
YT QI++GL++LH++N+I+R
Sbjct: 294 YTAQIVSGLEHLHQRNIIYR 313
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
H +V + E++L+ +E V G L + ++ L + Y+ +I L YLHE
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 309 QNVIHR 314
+ +I+R
Sbjct: 172 RGIIYR 177
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
H +V + E++L+ +E V G L + ++ L + Y+ +I L YLHE
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 309 QNVIHR 314
+ +I+R
Sbjct: 129 RGIIYR 134
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 250 HDNIVQYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHE 308
H +V + E++L+ +E V G L + ++ L + Y+ +I L YLHE
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 309 QNVIHR 314
+ +I+R
Sbjct: 125 RGIIYR 130
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
++ G +GSGSFG +Y G + +EV+++ + + + L +E + + Q
Sbjct: 11 YRLGRKIGSGSFGDIYLGAN----IASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVG 66
Query: 252 -NIVQYFGTEKDENKLYIFLELVTQGSLAKIY----QEYHLKDSQVSAYTWQILNGLKYL 306
+++ G E D N + +EL+ SL ++ +++ LK + A Q+++ ++Y+
Sbjct: 67 IPSIKWCGAEGDYNVM--VMELLGP-SLEDLFNFCSRKFSLKTVLLLAD--QMISRIEYI 121
Query: 307 HEQNVIHR 314
H +N IHR
Sbjct: 122 HSKNFIHR 129
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 194 KGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEH 250
KGA +G GS+G V + A++ + + ++ + V +++ E+ L+ + H
Sbjct: 31 KGA-IGQGSYGVVRVAIENQTR--AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 251 DNIVQYFGTEKDENKLYIFLELVTQGSL 278
NI + + +DE + + +EL G L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHL 115
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 198 LGSGSFGSVYEGFTDD--GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
+G+G+FG V D AVK + +GE+ +++EI H NIV+
Sbjct: 27 IGAGNFG-VARLMRDKQANELVAVKYIE------RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 256 YFGTEKDENKLYIFLELVTQGSL-AKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ L I +E + G L +I + + + Q+++G+ Y H V HR
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHR 139
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 120
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 245 LGQFEHDNIVQYFG----TEKDENKL-YIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQI 299
L + H +IVQ F T++ + + YI +E V SL K + L ++ AY +I
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-KRSKGQKLPVAEAIAYLLEI 191
Query: 300 LNGLKYLHEQNVIH 313
L L YLH +++
Sbjct: 192 LPALSYLHSIGLVY 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 19/135 (14%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+FG V + DG +++ ++ + E E+ L H NI+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNIINL 88
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQE---------YHLKDSQVSAYTWQ--------I 299
G + LY+ +E G+L ++ + + +S S + Q +
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 300 LNGLKYLHEQNVIHR 314
G+ YL ++ IHR
Sbjct: 149 ARGMDYLSQKQFIHR 163
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 19/135 (14%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+FG V + DG +++ ++ + E E+ L H NI+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNIINL 91
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQE---------YHLKDSQVSAYTWQ--------I 299
G + LY+ +E G+L ++ + + +S S + Q +
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 300 LNGLKYLHEQNVIHR 314
G+ YL ++ IHR
Sbjct: 152 ARGMDYLSQKQFIHR 166
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS--LLGQFEHDN 252
G +GSGSFG +Y G +EV+++ + + + L E +I L G N
Sbjct: 12 GRKIGSGSFGEIYLGTN----IQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPN 67
Query: 253 IVQYFGTEKDENKLYIFLELVTQGSLAKIYQ--EYHLKDSQVSAYTWQILNGLKYLHEQN 310
V++FG E D N L ++L+ SL ++ L V Q++N ++++H ++
Sbjct: 68 -VRWFGVEGDYNVL--VMDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS 123
Query: 311 VIHR 314
+HR
Sbjct: 124 FLHR 127
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 19/135 (14%)
Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+FG V + DG +++ ++ + E E+ L H NI+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNIINL 81
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQE---------YHLKDSQVSAYTWQ--------I 299
G + LY+ +E G+L ++ + + +S S + Q +
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 300 LNGLKYLHEQNVIHR 314
G+ YL ++ IHR
Sbjct: 142 ARGMDYLSQKQFIHR 156
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 76
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 77 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 134
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+FG V + +A+K ++ + + E + + E+++ + G + + Y
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+DEN LY+ ++ G L + ++ L + Y +++ + +H+ + +HR
Sbjct: 142 --AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 199
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 72
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 73 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 130
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 217 FAVKEVSLQDQGTQGEQSVLQLEQ----EISLLGQFE-HDNIVQYFGTEKDENKLYIFLE 271
+AVK + + G+ + V +L + E+ +L + H NI+Q T + ++ +
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 272 LVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L+ +G L + ++ L + + +L + LH+ N++HR
Sbjct: 92 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR 135
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 92
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 93 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 150
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 92
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 93 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 150
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 217 FAVKEVSLQDQGTQGEQSVLQLEQ----EISLLGQFE-HDNIVQYFGTEKDENKLYIFLE 271
+AVK + + G+ + V +L + E+ +L + H NI+Q T + ++ +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 272 LVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L+ +G L + ++ L + + +L + LH+ N++HR
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR 148
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 217 FAVKEVSLQDQGTQGEQSVLQLEQ----EISLLGQFE-HDNIVQYFGTEKDENKLYIFLE 271
+AVK + + G+ + V +L + E+ +L + H NI+Q T + ++ +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 272 LVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
L+ +G L + ++ L + + +L + LH+ N++HR
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR 148
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 198 LGSGSFGSV-YEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
+G G+FG V + +A+K ++ + + E + + E+++ + G + + Y
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 257 FGTEKDENKLYIFLELVTQGSLAKIYQEYH--LKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+DEN LY+ ++ G L + ++ L + Y +++ + +H+ + +HR
Sbjct: 158 --AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHR 215
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 120
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 120
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 178
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 214 GFFFAVK--EVSLQDQGTQGEQSVLQ-LEQEISLLGQFE-HDNIVQYFGTEKDENKLYIF 269
G FAVK EV+ + + + V + +E +L Q H +I+ + + + +++
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 270 LELVTQGSLAK-IYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+L+ +G L + ++ L + + + +L + +LH N++HR
Sbjct: 179 FDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/118 (18%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQ 255
+GSG V++ + +A+K V+L++ Q S EI+ L + + D I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS---YRNEIAYLNKLQQHSDKIIR 73
Query: 256 YFGTEKDENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ E + +Y+ +E + + ++ + + +Y +L + +H+ ++H
Sbjct: 74 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVH 131
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 116 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 160
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 109 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 153
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 110 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 154
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 110 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 154
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKD--ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NI++ T KD + E + ++YQ L D + Y +++L L Y H +
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI--LTDFDIRFYMYELLKALDYCHSK 151
Query: 310 NVIHR 314
++HR
Sbjct: 152 GIMHR 156
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 268 IFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIHR 314
+ E V ++YQ L D + Y ++IL L Y H ++HR
Sbjct: 111 LVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHR 155
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKD--ENKLYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NI++ T KD + E + ++YQ L D + Y +++L L Y H +
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQI--LTDFDIRFYMYELLKALDYCHSK 156
Query: 310 NVIHR 314
++HR
Sbjct: 157 GIMHR 161
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 146
Query: 310 NVIHR 314
++HR
Sbjct: 147 GIMHR 151
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 145
Query: 310 NVIHR 314
++HR
Sbjct: 146 GIMHR 150
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 165
Query: 310 NVIHR 314
++HR
Sbjct: 166 GIMHR 170
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 144
Query: 310 NVIHR 314
++HR
Sbjct: 145 GIMHR 149
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 144
Query: 310 NVIHR 314
++HR
Sbjct: 145 GIMHR 149
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 144
Query: 310 NVIHR 314
++HR
Sbjct: 145 GIMHR 149
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 145
Query: 310 NVIHR 314
++HR
Sbjct: 146 GIMHR 150
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 16 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 71
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 72 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 131
Query: 314 R 314
R
Sbjct: 132 R 132
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 144
Query: 310 NVIHR 314
++HR
Sbjct: 145 GIMHR 149
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 144
Query: 310 NVIHR 314
++HR
Sbjct: 145 GIMHR 149
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 252 NIVQYFGTEKDENK--LYIFLELVTQGSLAKIYQEYHLKDSQVSAYTWQILNGLKYLHEQ 309
NIV+ +D++ + E V +Y L D + Y +++L L Y H Q
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHSQ 144
Query: 310 NVIHR 314
++HR
Sbjct: 145 GIMHR 149
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 13 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 314 R 314
R
Sbjct: 129 R 129
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 13 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 314 R 314
R
Sbjct: 129 R 129
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 13 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 314 R 314
R
Sbjct: 129 R 129
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 18 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 73
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 74 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 133
Query: 314 R 314
R
Sbjct: 134 R 134
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 13 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 314 R 314
R
Sbjct: 129 R 129
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 198 LGSGSFGSVY---EGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
LG G+FG V E T G ++A+K L+ + + V E +L H +
Sbjct: 13 LGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 255 QYFGTEKDENKLYIFLELVTQGSLA-KIYQEYHLKDSQVSAYTWQILNGLKYLHEQNVIH 313
+ ++L +E G L + +E + + Y +I++ L+YLH ++V++
Sbjct: 69 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 314 R 314
R
Sbjct: 129 R 129
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,745,791
Number of Sequences: 62578
Number of extensions: 337914
Number of successful extensions: 2512
Number of sequences better than 100.0: 925
Number of HSP's better than 100.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 379
Number of HSP's that attempted gapping in prelim test: 1196
Number of HSP's gapped (non-prelim): 947
length of query: 317
length of database: 14,973,337
effective HSP length: 99
effective length of query: 218
effective length of database: 8,778,115
effective search space: 1913629070
effective search space used: 1913629070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)