BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021089
(317 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O12971|LFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Gallus
gallus GN=LFNG PE=2 SV=1
Length = 363
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS--------EGYEQNAKH--S 221
++G +WF DDD V LVK LS Y + Y+G S E +N H
Sbjct: 174 ESGRKWFCHVDDDNYVNVRTLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVH 233
Query: 222 FGMAFGGGGFAISHSLA 238
F A GG GF IS LA
Sbjct: 234 FWFATGGAGFCISRGLA 250
>sp|Q6Y288|B3GLT_HUMAN Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3GALTL PE=1 SV=2
Length = 498
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
W V DDDT+ + L LS YD ++G +S GGGG S
Sbjct: 344 WLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYS--YITGGGGMVFSRE 401
Query: 237 LARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFR 283
R L + C Y++ D + C LG+ +T P FHQ R
Sbjct: 402 AVRRLLASKCRC---YSNDAPDDMVLGMCFSGLGIPVTHSPLFHQAR 445
>sp|Q8BHT6|B3GLT_MOUSE Beta-1,3-glucosyltransferase OS=Mus musculus GN=B3galtl PE=2 SV=3
Length = 489
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 175 VRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAIS 234
+ W V DDDT+ + L LS YD ++G + GGGG S
Sbjct: 333 ISWLVIVDDDTLISISRLRHLLSCYDSSDPVFLGERYGYGLGTG--GYSYVTGGGGMVFS 390
Query: 235 HSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFR 283
R L + C Y++ D + C LGV +T P FHQ R
Sbjct: 391 REAIRRLLVSSCRC---YSNDAPDDMVLGMCFSGLGVPVTHSPLFHQAR 436
>sp|Q24342|FNG_DROME Fringe glycosyltransferase OS=Drosophila melanogaster GN=fng PE=1
SV=1
Length = 412
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGS-----------NSEGYEQNAKH 220
++G +WF DDD V LVK L +Y +Y+G +S+ N K
Sbjct: 226 ESGKKWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLEIHLDSKNTTTNKKI 285
Query: 221 SFGMAFGGGGFAISHSLA 238
+F A GG GF +S +L
Sbjct: 286 TFWFATGGAGFCLSRALT 303
>sp|Q18515|C1GLT_CAEEL Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Caenorhabditis elegans GN=C38H2.2 PE=2 SV=2
Length = 389
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAIS-H 235
WF+ DDDT ++NL L + D + G + + Q HS GG G+ +S
Sbjct: 181 WFLKADDDTYVVMENLRFMLLAHSPDEPIHFGCKFKPFTQGGYHS-----GGAGYVLSRE 235
Query: 236 SLARVLAGAL-DSCLMRYAHLYGSDARVFSCLVELGV 271
+L + + AL D L H DA + CL ++GV
Sbjct: 236 ALKKFIEVALPDKSLCSQNHGGAEDAEMGKCLEKVGV 272
>sp|Q9JJ06|C1GLT_MOUSE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Mus musculus GN=C1galt1 PE=1 SV=1
Length = 363
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 25/113 (22%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
WF+ DDDT VDNL LSKY+ ++ Y G + Y + G GG G+ +S
Sbjct: 164 WFMKADDDTYVIVDNLRWLLSKYNPEQPIYFGRRFKPYVKQ-----GYMSGGAGYVLSKE 218
Query: 237 LARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAIN 289
R A + ++ S + +L +G RCM+ IN
Sbjct: 219 ALRRFVNAFKTEKCTHS----------SSIEDLALG----------RCMEIIN 251
>sp|Q0VC84|C1GLT_BOVIN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Bos taurus GN=C1GALT1 PE=2 SV=1
Length = 368
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
WF+ DDDT +DNL LSKY+ + Y G + Y + G GG G+ +S
Sbjct: 164 WFMKADDDTYVILDNLRWLLSKYNPEEPIYFGRRFKPYVKQ-----GYMSGGAGYVLS-- 216
Query: 237 LARVLAGALDSCLMRYAHLYGSDARVFSCLVE-LGVGLTPEPGFHQFRCMKAIN 289
L R+ + +D S +E L +G RCM+ IN
Sbjct: 217 ---------KEALKRFVEAFKTDKCTHSSSIEDLALG----------RCMEIIN 251
>sp|Q9NS00|C1GLT_HUMAN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Homo sapiens GN=C1GALT1 PE=1 SV=1
Length = 363
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
WF+ DDDT +DNL LSKYD + Y G + Y + G GG G+ +S
Sbjct: 164 WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQ-----GYMSGGAGYVLS-- 216
Query: 237 LARVLAGALDSCLMRYAHLYGSDARVFSCLVE-LGVGLTPEPGFHQFRCMKAIN 289
L R+ + +D S +E L +G RCM+ +N
Sbjct: 217 ---------KEALKRFVDAFKTDKCTHSSSIEDLALG----------RCMEIMN 251
>sp|Q08BL3|C1GTA_DANRE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A
OS=Danio rerio GN=c1galt1a PE=2 SV=1
Length = 408
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
WF+ DDDT VDNL LS Y ++ Y G + Y + G GG G+ +S
Sbjct: 169 WFLKADDDTFVVVDNLRWILSNYTPEQPIYFGKRFKPYTKQ-----GYMSGGAGYVLSKE 223
Query: 237 LARVLAGALDSCLMRYAHLYGSDARVFSCLVELGV 271
R + + + D + CL ++GV
Sbjct: 224 ALRRFVEGFSTKVCTHTTPV-EDLAMGQCLEKMGV 257
>sp|O09008|MFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase manic fringe OS=Mus
musculus GN=Mfng PE=1 SV=1
Length = 321
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKH-----SF 222
+G+RWF DDD L++ L + DR YVG S E +K+ F
Sbjct: 133 SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKNRTKLVRF 192
Query: 223 GMAFGGGGFAISHSLA-RVLAGALDSCLMRYAHLYG-SDARVFSCLVELGVG--LTPEPG 278
A GG GF I+ LA +++ A S + + L D ++E +G L P P
Sbjct: 193 WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPL 252
Query: 279 FH 280
FH
Sbjct: 253 FH 254
>sp|Q8JHF2|LFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Danio
rerio GN=lfng PE=2 SV=2
Length = 374
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKH-----S 221
++G +WF DDD LVK LS Y + Y+G S E E+ + +
Sbjct: 185 ESGKKWFCHVDDDNYVNTKTLVKLLSNYPHTQDMYIGKPSLDRPIEATERLGDNKMRPVN 244
Query: 222 FGMAFGGGGFAISHSLA 238
F A GG GF IS LA
Sbjct: 245 FWFATGGAGFCISRGLA 261
>sp|O00587|MFNG_HUMAN Beta-1,3-N-acetylglucosaminyltransferase manic fringe OS=Homo
sapiens GN=MFNG PE=1 SV=2
Length = 321
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 36/133 (27%)
Query: 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVG----------SNSEGYEQNAKHSF 222
+G+RWF DDD L++ L + R YVG S + + + F
Sbjct: 133 SGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASEPQPHNRTRLVQF 192
Query: 223 GMAFGGGGFAISHSLARVLA-----------GAL----DSCLMRYAHLYGSDARVFSCLV 267
A GG GF I+ LA +A AL D C M Y + C
Sbjct: 193 WFATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGY---------IIEC-- 241
Query: 268 ELGVGLTPEPGFH 280
+LG L P P FH
Sbjct: 242 KLGGRLQPSPLFH 254
>sp|Q1RLK6|B3GN4_MOUSE UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
OS=Mus musculus GN=B3gnt4 PE=2 SV=2
Length = 350
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 181 GDDDTVFFVDNLVKTLSKYDDDRWFYVGS--NSEGYEQNAKHSFGMAF------------ 226
GDDD V N+++ L +D + F VG +N K + + F
Sbjct: 191 GDDDVFIHVPNVLEFLEGWDPAQDFLVGDVIRLARPNRNTKVKYFIPFSMYRARHYPPYA 250
Query: 227 GGGGFAISHSLARVLAGALDSCLMRYAHLYG-SDARVFSCLVELGVGLTPEPGFHQFRCM 285
GGGG+ +S + R L A++ A L+ D V CL +LGV GF F
Sbjct: 251 GGGGYVMSQATVRHLHMAMEE-----AELFPIDDVFVGMCLRKLGVTPIHHAGFKTFGIQ 305
Query: 286 KAIN 289
+ +N
Sbjct: 306 QPLN 309
>sp|Q9JJ05|C1GLT_RAT Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Rattus norvegicus GN=C1galt1 PE=1 SV=1
Length = 363
Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
WF+ DDDT +DNL LSKY+ ++ Y G + Y + G GG G+ +S
Sbjct: 164 WFMKADDDTYVILDNLRWLLSKYNPEQPIYFGRRFKPYVKQ-----GYMSGGAGYVLSKE 218
Query: 237 LARVLAGALDS 247
R A +
Sbjct: 219 ALRRFVDAFKT 229
>sp|Q6GNL1|C1GLT_XENLA Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Xenopus laevis GN=c1galt1 PE=2 SV=1
Length = 360
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 175 VRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAIS 234
WF DDDT +DNL LS Y D+ Y G + Y + G GG G+ +S
Sbjct: 150 TEWFFKADDDTYVIMDNLRWMLSNYTADQPIYFGKRFKPYIKQ-----GYMSGGAGYVLS 204
Query: 235 -HSLARVLAG 243
+L R + G
Sbjct: 205 REALIRFVEG 214
>sp|P79948|LFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Xenopus
laevis GN=lfng PE=2 SV=1
Length = 375
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 176 RWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKH-----SFGMA 225
+WF DDD V LVK LS+Y Y+G S + E+ ++ +F A
Sbjct: 190 KWFCHVDDDNYVNVRTLVKLLSRYSHTNDIYIGKPSLDRPIQATERISESNMRPVNFWFA 249
Query: 226 FGGGGFAISHSLA 238
GG GF IS LA
Sbjct: 250 TGGAGFCISRGLA 262
>sp|Q9R1U9|RFNG_RAT Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Rattus
norvegicus GN=Rfng PE=2 SV=1
Length = 334
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 29/200 (14%)
Query: 97 PRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAV 156
PR R +R W S + F D DP L + S+ T +R+
Sbjct: 76 PRLRLLLRTWISRAPRQTFIFTD-------GDDPELQLLA----GSQMINTNCSAVRT-- 122
Query: 157 RVARVVKEAVDLTD-EKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS---- 211
R A K +V+ ++G +WF DDD +L+ LS + ++ Y+G S
Sbjct: 123 RQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHP 182
Query: 212 -------EGYEQNAKHSFGMAFGGGGFAISHSLARVLA--GALDSCLMRYAHLYGSDARV 262
+G + F A GG GF +S LA ++ +L S + + D
Sbjct: 183 IEATERVQGGGTSNTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCT 242
Query: 263 FSCLVE--LGVGLTPEPGFH 280
+VE LG L P FH
Sbjct: 243 VGYIVEGLLGARLLHSPLFH 262
>sp|Q5IS64|MFNG_PANTR Beta-1,3-N-acetylglucosaminyltransferase manic fringe OS=Pan
troglodytes GN=MFNG PE=2 SV=1
Length = 321
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 49/133 (36%), Gaps = 36/133 (27%)
Query: 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVG----------SNSEGYEQNAKHSF 222
+G+RWF DDD L++ L + YVG S + + + F
Sbjct: 133 SGLRWFCHVDDDNYVNPRALLQLLRAFPLAHDVYVGRPSLNRPIHASEPQPHNRTRLVQF 192
Query: 223 GMAFGGGGFAISHSLARVLA-----------GAL----DSCLMRYAHLYGSDARVFSCLV 267
A GG GF I+ LA +A AL D C M Y + C
Sbjct: 193 WFATGGAGFCINRRLALKMAPWASGSRFMDTSALIRLPDDCTMGY---------IIEC-- 241
Query: 268 ELGVGLTPEPGFH 280
+LG L P P FH
Sbjct: 242 KLGGRLQPSPLFH 254
>sp|Q8NFL0|B3GN7_HUMAN UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
OS=Homo sapiens GN=B3GNT7 PE=2 SV=1
Length = 401
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Query: 178 FVF-GDDDTVFFVDNLVKTLSKYDDDRWFYVG-----------SNSEGYEQNA---KHSF 222
F+F GDDD NL++ L+ +VG +++ Y A K S+
Sbjct: 235 FIFKGDDDVFVNPTNLLEFLADRQPQENLFVGDVLQHARPIRRKDNKYYIPGALYGKASY 294
Query: 223 GMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYG-SDARVFSCLVELGVGLTPEPGFHQ 281
GGGGF ++ SLAR L A D+ LY D + CL LGV T GF
Sbjct: 295 PPYAGGGGFLMAGSLARRLHHACDTL-----ELYPIDDVFLGMCLEVLGVQPTAHEGFKT 349
Query: 282 F 282
F
Sbjct: 350 F 350
>sp|O09009|RFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Mus
musculus GN=Rfng PE=2 SV=1
Length = 332
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 29/200 (14%)
Query: 97 PRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAV 156
PR R +R W S + F D DP L + + T +R+
Sbjct: 74 PRLRLLLRTWISRAPRQTFIFTD-------GDDPELQMLA----GGRMINTNCSAVRT-- 120
Query: 157 RVARVVKEAVDLTD-EKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS---- 211
R A K +V+ ++G +WF DDD +L+ LS + ++ Y+G S
Sbjct: 121 RQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHP 180
Query: 212 -------EGYEQNAKHSFGMAFGGGGFAISHSLARVLA--GALDSCLMRYAHLYGSDARV 262
+G + F A GG GF +S LA ++ +L S + + D
Sbjct: 181 IEATERVQGGGTSNTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCT 240
Query: 263 FSCLVE--LGVGLTPEPGFH 280
+VE LG L P FH
Sbjct: 241 VGYIVEGLLGARLLHSPLFH 260
>sp|Q2KJ92|LFNG_BOVIN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Bos
taurus GN=LFNG PE=2 SV=1
Length = 380
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKHS----- 221
++G +WF DDD V L++ L Y + Y+G S + E+ +++
Sbjct: 191 ESGRKWFCHVDDDNYVNVRALLRLLGSYPHTQDVYLGKPSLDRPIQATERVSENKVRPVH 250
Query: 222 FGMAFGGGGFAISHSLA 238
F A GG GF IS LA
Sbjct: 251 FWFATGGAGFCISRGLA 267
>sp|Q8K0J2|B3GN7_MOUSE UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
OS=Mus musculus GN=B3gnt7 PE=2 SV=2
Length = 397
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 178 FVF-GDDDTVFFVDNLVKTLSKYDDDRWFYVGS-----------NSEGY---EQNAKHSF 222
FVF GDDD NL++ LS +VG +++ Y K ++
Sbjct: 231 FVFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRKKDNKYYIPAVMYGKATY 290
Query: 223 GMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQF 282
GGGGF +S SLAR L A D+ + D + CL LGV T GF F
Sbjct: 291 PPYAGGGGFLMSGSLARQLHHACDTLEL----FPIDDVFLGMCLEVLGVKPTGHEGFKTF 346
>sp|Q5F3G7|C1GLT_CHICK Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Gallus gallus GN=C1GALT1 PE=2 SV=1
Length = 366
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAIS-H 235
WF+ DDDT +DNL LSKY ++ Y G + Y + G GG G+ +S
Sbjct: 165 WFMKADDDTYVILDNLRWLLSKYSPEQPIYFGRRFKPYVKQ-----GYMSGGAGYVLSKE 219
Query: 236 SLAR-VLAGALDSC 248
+L R V A + C
Sbjct: 220 ALKRFVTAFKTNKC 233
>sp|O12972|RFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Gallus
gallus GN=RFNG PE=2 SV=2
Length = 372
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 15/80 (18%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGS-------------NSEGYEQNA 218
++G +WF DDD L++ LS + + YVG S+G + +
Sbjct: 182 ESGQKWFCHVDDDNYVNPRTLLRLLSAFSPSQDVYVGRPSLDHPIEAADHVQSDGSKTSV 241
Query: 219 KHSFGMAFGGGGFAISHSLA 238
K F A GG GF IS LA
Sbjct: 242 K--FWFATGGAGFCISRGLA 259
>sp|Q66H69|B3GN7_RAT UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
OS=Rattus norvegicus GN=B3gnt7 PE=2 SV=1
Length = 397
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 178 FVF-GDDDTVFFVDNLVKTLSKYDDDRWFYVGS-----------NSEGY---EQNAKHSF 222
F+F GDDD NL++ LS +VG +++ Y +K ++
Sbjct: 231 FIFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRKKDNKYYIPAVMYSKATY 290
Query: 223 GMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQF 282
GGGGF +S SLAR L A D+ + D + CL LGV T GF F
Sbjct: 291 PPYAGGGGFLMSGSLARQLHHACDTLEL----FPIDDVFLGMCLEVLGVKPTGHEGFKTF 346
>sp|Q7SYI5|C1GTB_DANRE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
OS=Danio rerio GN=c1galt1b PE=2 SV=1
Length = 374
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAIS-H 235
WF+ DDDT VDNL L+++ + Y G + Y + G GG G+ +S
Sbjct: 164 WFLKADDDTYVIVDNLRWILARHSPEDPVYFGRRFKPYVKQ-----GYMSGGAGYVLSKE 218
Query: 236 SLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGV 271
+L R + G + D + C+ ++GV
Sbjct: 219 ALRRFVEGFRTKVCTHTTSV--EDLAMGQCMEKIGV 252
>sp|Q7K237|C1GLT_DROME Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Drosophila melanogaster GN=C1GalTA PE=2 SV=1
Length = 388
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 177 WFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHS 236
WF+ DDDT V+N+ L Y + Y G + Y + G GG G+ +S
Sbjct: 176 WFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFKPYVKQ-----GYMSGGAGYVLSRE 230
Query: 237 LAR--VLAGALDSCLMRYAHLYGSDARVFSCLVELGV 271
R V+ + L + + D + CL + V
Sbjct: 231 AVRRFVVEALPNPKLCKSDNSGAEDVEIGKCLQNVNV 267
>sp|P41881|YPT3_CAEEL Uncharacterized protein F37A4.3 OS=Caenorhabditis elegans
GN=F37A4.3 PE=4 SV=1
Length = 229
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 176 RWFVFGDDDTVFFVDNLVKTLSKYD 200
+W++F D+ FFV+ L+K LSK+D
Sbjct: 107 QWYMFAFDNNYFFVERLIKELSKFD 131
>sp|Q5DTK1|CHSS3_MOUSE Chondroitin sulfate synthase 3 OS=Mus musculus GN=Chsy3 PE=1 SV=3
Length = 884
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 14/172 (8%)
Query: 104 RLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVK 163
R W R F + + S++ G P P VI+ ++P +S + + +
Sbjct: 193 RTWARFIPGRVEFFSSQQSPSAALGQPPPPLPVIA--LPGVDDSYPPQKKSFMMIKYMHD 250
Query: 164 EAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQN-----A 218
+D + WF+ DDD D L + L + + Y+G G +
Sbjct: 251 HYLDKYE------WFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNTEELGKLGL 304
Query: 219 KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELG 270
+ GG G S + R + + CL R + D V C+ G
Sbjct: 305 EPGENFCMGGPGMIFSREVLRRMVPHIGECL-REMYTTHEDVEVGRCVRRFG 355
>sp|O09010|LFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Mus
musculus GN=Lfng PE=1 SV=1
Length = 378
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKHS----- 221
++G +WF DDD + L++ L+ Y + Y+G S + E+ ++H
Sbjct: 189 ESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERISEHKVRPVH 248
Query: 222 FGMAFGGGGFAISHSLA 238
F A GG GF IS LA
Sbjct: 249 FWFATGGAGFCISRGLA 265
>sp|Q924T4|LFNG_RAT Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Rattus
norvegicus GN=Lfng PE=2 SV=1
Length = 378
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKH-----S 221
++G +WF DDD + L++ L+ Y + Y+G S + E+ ++H
Sbjct: 189 ESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERISEHRVRPVH 248
Query: 222 FGMAFGGGGFAISHSLA 238
F A GG GF IS LA
Sbjct: 249 FWFATGGAGFCISRGLA 265
>sp|P52438|V120_HHV7J Capsid assembly protein U30 OS=Human herpesvirus 7 (strain JI)
GN=U30 PE=3 SV=1
Length = 938
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 154 SAVRVARVVKEAVDLTDEKAGVRWF--VFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS 211
+++ R++ E +D +K RWF +F DD +F DN + L K D +Y SN
Sbjct: 175 ESIKNCRLIAELIDELYQKV-YRWFMQIFTYDDIIFPNDNFLDRLLKMDFCYTYYTASNQ 233
>sp|Q8NES3|LFNG_HUMAN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Homo
sapiens GN=LFNG PE=1 SV=2
Length = 379
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 172 KAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGYEQNAKHS----- 221
++G +WF DDD + L++ L+ Y R YVG S + E+ +++
Sbjct: 190 ESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENKVRPVH 249
Query: 222 FGMAFGGGGFAISHSLA 238
F A GG GF IS LA
Sbjct: 250 FWFATGGAGFCISRGLA 266
>sp|A7IIM2|RF1_XANP2 Peptide chain release factor 1 OS=Xanthobacter autotrophicus
(strain ATCC BAA-1158 / Py2) GN=prfA PE=3 SV=1
Length = 360
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 78 NPLTRRHLLFSIASSSSSWPRRRSYVRLW-----YSP--NSTRALTFLDRAAD------S 124
+ L RH I ++ S YVRL SP RAL +R + +
Sbjct: 10 DQLVARH--AEIEAALSRGAEGEEYVRLGREFSDLSPVVEQVRALKDAERDLEGANELLA 67
Query: 125 SSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVD----LTDEKAGVRWFVF 180
SA DP + R + A+ + + L +AVR+A + K+A+D + + +AG
Sbjct: 68 ESAADPEM-REMAEAEVERLQDRI-EALATAVRLALLPKDAMDERGIILEVRAGT----- 120
Query: 181 GDDDTVFFVDNLVKTLSKYDDDRWFYVG--SNSEGYEQNAKHSFGMAFGGGGFA 232
G D+ F +L + ++Y ++ + V S SEG K G G +A
Sbjct: 121 GGDEAALFAGDLYRMYTRYAAEKGWSVEILSESEGTMGGYKEIVAALHGRGAYA 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,534,672
Number of Sequences: 539616
Number of extensions: 4597234
Number of successful extensions: 14158
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 14125
Number of HSP's gapped (non-prelim): 38
length of query: 317
length of database: 191,569,459
effective HSP length: 117
effective length of query: 200
effective length of database: 128,434,387
effective search space: 25686877400
effective search space used: 25686877400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)