Query 021091
Match_columns 317
No_of_seqs 210 out of 1218
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 12:37:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021091.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021091hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2uyo_A Hypothetical protein ML 100.0 1.2E-44 4.1E-49 344.5 21.4 232 42-276 11-292 (310)
2 3iei_A Leucine carboxyl methyl 100.0 1.4E-38 4.9E-43 305.6 14.4 227 38-266 19-285 (334)
3 1rjd_A PPM1P, carboxy methyl t 100.0 3.5E-35 1.2E-39 281.9 13.3 218 44-266 4-290 (334)
4 2zwa_A Leucine carboxyl methyl 100.0 7.1E-31 2.4E-35 272.3 14.0 236 26-267 9-314 (695)
5 3giw_A Protein of unknown func 98.8 3.5E-08 1.2E-12 92.2 12.2 127 96-227 64-200 (277)
6 2qe6_A Uncharacterized protein 98.5 8.9E-07 3E-11 81.6 12.1 129 92-227 59-196 (274)
7 4a6d_A Hydroxyindole O-methylt 96.4 0.022 7.5E-07 53.8 11.4 136 111-260 179-332 (353)
8 3jwh_A HEN1; methyltransferase 96.4 0.044 1.5E-06 47.0 12.3 144 112-264 30-193 (217)
9 3jwg_A HEN1, methyltransferase 96.2 0.053 1.8E-06 46.5 12.0 158 93-264 16-193 (219)
10 4gek_A TRNA (CMO5U34)-methyltr 95.1 0.17 5.8E-06 45.8 11.2 115 96-226 58-178 (261)
11 3gwz_A MMCR; methyltransferase 95.1 0.16 5.5E-06 47.9 11.5 133 111-257 202-350 (369)
12 3mcz_A O-methyltransferase; ad 95.0 0.1 3.6E-06 48.3 9.6 136 112-258 180-334 (352)
13 3g2m_A PCZA361.24; SAM-depende 94.7 0.088 3E-06 47.7 8.1 105 113-227 84-190 (299)
14 3dp7_A SAM-dependent methyltra 94.6 0.18 6.2E-06 47.4 10.2 105 111-227 179-288 (363)
15 3ocj_A Putative exported prote 94.5 0.53 1.8E-05 42.7 13.0 121 92-227 100-227 (305)
16 3mgg_A Methyltransferase; NYSG 94.4 0.5 1.7E-05 41.8 12.3 100 112-226 38-141 (276)
17 3i53_A O-methyltransferase; CO 94.4 0.085 2.9E-06 48.7 7.3 132 112-257 170-315 (332)
18 3lcc_A Putative methyl chlorid 94.4 0.099 3.4E-06 45.4 7.4 131 113-257 68-201 (235)
19 3gu3_A Methyltransferase; alph 93.3 2.9 9.9E-05 37.3 15.4 100 111-226 22-125 (284)
20 1kpg_A CFA synthase;, cyclopro 93.2 0.47 1.6E-05 42.3 9.9 116 96-226 51-167 (287)
21 3hnr_A Probable methyltransfer 92.8 1.1 3.6E-05 38.0 11.2 97 112-226 46-144 (220)
22 3dlc_A Putative S-adenosyl-L-m 92.7 0.37 1.3E-05 40.5 7.9 101 113-226 45-147 (219)
23 1ri5_A MRNA capping enzyme; me 92.7 2.4 8.3E-05 37.4 13.8 107 112-228 65-175 (298)
24 1wzn_A SAM-dependent methyltra 92.6 0.22 7.5E-06 43.4 6.6 117 96-229 28-147 (252)
25 3hem_A Cyclopropane-fatty-acyl 92.6 0.9 3.1E-05 40.9 11.0 118 94-226 57-182 (302)
26 2r3s_A Uncharacterized protein 92.6 0.48 1.7E-05 43.2 9.2 137 111-260 165-321 (335)
27 3e23_A Uncharacterized protein 92.5 0.26 9E-06 41.8 6.8 126 112-257 44-176 (211)
28 2fk8_A Methoxy mycolic acid sy 92.5 0.61 2.1E-05 42.3 9.7 101 113-226 92-193 (318)
29 3bgv_A MRNA CAP guanine-N7 met 92.0 0.38 1.3E-05 43.8 7.6 134 92-228 15-156 (313)
30 2p8j_A S-adenosylmethionine-de 92.0 1.2 4.1E-05 37.3 10.3 102 112-227 24-128 (209)
31 3lst_A CALO1 methyltransferase 91.6 0.31 1.1E-05 45.4 6.7 131 110-257 183-330 (348)
32 2vdw_A Vaccinia virus capping 91.6 0.51 1.7E-05 43.5 8.1 134 92-228 29-170 (302)
33 3ou2_A SAM-dependent methyltra 91.5 0.58 2E-05 39.4 7.8 97 112-226 47-145 (218)
34 3h2b_A SAM-dependent methyltra 91.2 0.38 1.3E-05 40.4 6.3 128 113-258 43-177 (203)
35 4htf_A S-adenosylmethionine-de 91.0 2 6.7E-05 38.2 11.2 103 113-228 70-174 (285)
36 1x19_A CRTF-related protein; m 91.0 1.8 6.2E-05 40.1 11.3 103 111-227 190-296 (359)
37 3dli_A Methyltransferase; PSI- 90.7 0.39 1.3E-05 41.7 6.0 127 112-257 42-178 (240)
38 3cgg_A SAM-dependent methyltra 89.8 2.7 9.1E-05 34.2 10.2 121 112-258 47-170 (195)
39 3ggd_A SAM-dependent methyltra 89.7 1.4 4.7E-05 38.1 8.8 104 112-227 57-164 (245)
40 3dtn_A Putative methyltransfer 89.4 0.74 2.5E-05 39.5 6.7 98 112-225 45-146 (234)
41 3kkz_A Uncharacterized protein 89.2 2.1 7.3E-05 37.5 9.8 132 112-257 47-190 (267)
42 3f4k_A Putative methyltransfer 89.2 1.8 6E-05 37.5 9.1 130 112-257 47-190 (257)
43 3pfg_A N-methyltransferase; N, 89.0 1.4 4.7E-05 38.6 8.3 96 112-226 51-150 (263)
44 3vc1_A Geranyl diphosphate 2-C 88.5 0.97 3.3E-05 41.1 7.1 132 112-257 118-263 (312)
45 2fyt_A Protein arginine N-meth 88.1 2.4 8.2E-05 39.5 9.7 123 92-226 46-170 (340)
46 2p7i_A Hypothetical protein; p 87.8 2.3 8E-05 36.1 8.8 96 113-228 44-142 (250)
47 3p9c_A Caffeic acid O-methyltr 87.6 1.8 6.1E-05 40.6 8.6 96 110-227 200-299 (364)
48 2ip2_A Probable phenazine-spec 87.5 0.91 3.1E-05 41.6 6.3 131 113-257 169-316 (334)
49 3orh_A Guanidinoacetate N-meth 87.4 1.5 5.2E-05 38.4 7.5 103 113-227 62-170 (236)
50 3lcv_B Sisomicin-gentamicin re 87.1 2.4 8.2E-05 39.3 8.8 153 91-258 112-267 (281)
51 1nkv_A Hypothetical protein YJ 87.0 1.5 5E-05 38.1 7.1 132 112-257 37-181 (256)
52 3dh0_A SAM dependent methyltra 86.6 2.7 9.2E-05 35.4 8.4 132 112-257 38-175 (219)
53 4hc4_A Protein arginine N-meth 86.6 1.2 4.1E-05 42.8 6.7 122 92-226 65-188 (376)
54 1tw3_A COMT, carminomycin 4-O- 86.1 2.7 9.2E-05 38.8 8.8 132 112-257 184-333 (360)
55 3htx_A HEN1; HEN1, small RNA m 86.1 7.4 0.00025 41.6 12.9 108 112-228 722-835 (950)
56 3l8d_A Methyltransferase; stru 86.0 1.9 6.6E-05 36.9 7.3 128 112-257 54-194 (242)
57 3reo_A (ISO)eugenol O-methyltr 85.7 1.6 5.6E-05 41.0 7.2 95 111-227 203-301 (368)
58 3ujc_A Phosphoethanolamine N-m 85.7 2.6 9E-05 36.4 8.1 132 112-257 56-200 (266)
59 3c3y_A Pfomt, O-methyltransfer 85.3 3.1 0.00011 36.3 8.4 110 112-229 71-183 (237)
60 1ve3_A Hypothetical protein PH 85.3 8 0.00027 32.4 10.8 118 93-227 23-142 (227)
61 3ofk_A Nodulation protein S; N 85.1 3.2 0.00011 34.9 8.2 112 99-227 40-154 (216)
62 1xtp_A LMAJ004091AAA; SGPP, st 85.1 2.1 7.2E-05 36.9 7.1 149 93-257 77-232 (254)
63 2xvm_A Tellurite resistance pr 84.9 3.4 0.00012 33.9 8.1 99 112-224 33-133 (199)
64 1g6q_1 HnRNP arginine N-methyl 84.8 3.3 0.00011 38.2 8.7 122 93-226 21-144 (328)
65 3g5t_A Trans-aconitate 3-methy 84.8 1.3 4.3E-05 39.9 5.7 107 112-225 37-147 (299)
66 1qzz_A RDMB, aclacinomycin-10- 84.3 2.9 9.9E-05 38.7 8.2 133 111-257 182-333 (374)
67 2kw5_A SLR1183 protein; struct 84.3 11 0.00039 31.0 11.2 99 114-227 32-131 (202)
68 2yxd_A Probable cobalt-precorr 84.1 11 0.00037 30.2 10.7 118 112-260 36-154 (183)
69 3duw_A OMT, O-methyltransferas 83.9 11 0.00039 31.7 11.2 106 112-230 59-170 (223)
70 3p9n_A Possible methyltransfer 83.7 6.7 0.00023 32.4 9.5 104 113-228 46-154 (189)
71 2y1w_A Histone-arginine methyl 82.9 4.2 0.00014 37.8 8.6 121 93-226 33-154 (348)
72 3g5l_A Putative S-adenosylmeth 82.9 5.2 0.00018 34.5 8.7 99 112-227 45-145 (253)
73 1y8c_A S-adenosylmethionine-de 82.8 8.1 0.00028 32.7 9.8 102 112-228 38-143 (246)
74 2i62_A Nicotinamide N-methyltr 82.7 1.8 6E-05 37.6 5.6 141 113-258 58-234 (265)
75 2avd_A Catechol-O-methyltransf 82.6 5.4 0.00018 33.9 8.6 108 112-228 70-180 (229)
76 2ex4_A Adrenal gland protein A 82.6 5 0.00017 34.5 8.5 134 112-257 80-219 (241)
77 3q7e_A Protein arginine N-meth 81.5 3.6 0.00012 38.3 7.6 122 93-226 49-172 (349)
78 1pjz_A Thiopurine S-methyltran 81.3 8.4 0.00029 32.5 9.3 134 113-258 24-171 (203)
79 1sui_A Caffeoyl-COA O-methyltr 80.0 4.4 0.00015 35.7 7.3 105 112-229 80-192 (247)
80 3d2l_A SAM-dependent methyltra 79.7 9.3 0.00032 32.4 9.1 100 113-228 35-138 (243)
81 3thr_A Glycine N-methyltransfe 78.5 3.1 0.00011 36.9 5.8 123 98-228 45-176 (293)
82 1vl5_A Unknown conserved prote 78.3 5.6 0.00019 34.6 7.4 131 112-257 38-184 (260)
83 3e8s_A Putative SAM dependent 78.2 21 0.00073 29.5 10.8 97 113-227 54-152 (227)
84 3bus_A REBM, methyltransferase 78.1 9.4 0.00032 33.2 8.8 116 96-226 48-165 (273)
85 3bxo_A N,N-dimethyltransferase 77.6 4.6 0.00016 34.3 6.4 110 96-227 28-141 (239)
86 3m70_A Tellurite resistance pr 76.9 4.6 0.00016 35.7 6.5 99 112-225 121-221 (286)
87 3fpf_A Mtnas, putative unchara 76.4 6.3 0.00022 36.6 7.4 98 111-227 122-222 (298)
88 3bkw_A MLL3908 protein, S-aden 75.8 11 0.00037 32.0 8.4 98 112-227 44-144 (243)
89 3lpm_A Putative methyltransfer 75.7 11 0.00038 33.0 8.6 125 112-257 50-195 (259)
90 1zx0_A Guanidinoacetate N-meth 75.7 5.7 0.0002 34.1 6.6 135 112-257 61-204 (236)
91 3fzg_A 16S rRNA methylase; met 75.6 5.3 0.00018 35.2 6.3 147 96-258 34-183 (200)
92 3e05_A Precorrin-6Y C5,15-meth 75.3 34 0.0011 28.3 12.6 120 112-258 41-163 (204)
93 3r0q_C Probable protein argini 75.2 5.3 0.00018 37.6 6.7 121 93-226 46-168 (376)
94 3ccf_A Cyclopropane-fatty-acyl 73.3 11 0.00037 33.2 7.9 96 112-228 58-155 (279)
95 3g07_A 7SK snRNA methylphospha 72.5 5.2 0.00018 36.0 5.7 95 162-261 154-268 (292)
96 2o57_A Putative sarcosine dime 71.9 14 0.00049 32.6 8.5 136 112-260 83-232 (297)
97 3tr6_A O-methyltransferase; ce 71.8 18 0.0006 30.4 8.7 108 113-229 66-176 (225)
98 1dus_A MJ0882; hypothetical pr 71.0 31 0.0011 27.5 9.8 104 112-228 53-158 (194)
99 3r3h_A O-methyltransferase, SA 70.7 2.6 8.9E-05 37.1 3.2 104 112-228 61-171 (242)
100 1fp1_D Isoliquiritigenin 2'-O- 70.6 3.6 0.00012 38.4 4.3 94 111-226 209-306 (372)
101 2fca_A TRNA (guanine-N(7)-)-me 70.5 23 0.00079 30.0 9.2 125 113-257 40-173 (213)
102 1l3i_A Precorrin-6Y methyltran 69.6 40 0.0014 26.8 12.3 122 112-259 34-156 (192)
103 1xxl_A YCGJ protein; structura 69.1 28 0.00097 29.6 9.6 131 112-257 22-168 (239)
104 2p35_A Trans-aconitate 2-methy 68.6 10 0.00035 32.5 6.6 95 112-227 34-132 (259)
105 3o4f_A Spermidine synthase; am 68.5 18 0.00063 33.4 8.5 107 109-218 81-220 (294)
106 2yqz_A Hypothetical protein TT 68.1 23 0.00078 30.2 8.7 99 112-226 40-140 (263)
107 2nxc_A L11 mtase, ribosomal pr 68.1 22 0.00074 31.2 8.7 130 95-257 107-238 (254)
108 3sm3_A SAM-dependent methyltra 67.6 22 0.00074 29.7 8.3 104 112-225 31-139 (235)
109 2pxx_A Uncharacterized protein 67.6 11 0.00039 31.0 6.5 111 98-226 32-158 (215)
110 3bkx_A SAM-dependent methyltra 65.9 21 0.00071 30.9 8.1 119 94-225 28-157 (275)
111 3grz_A L11 mtase, ribosomal pr 65.5 45 0.0015 27.4 9.9 130 96-257 48-179 (205)
112 3u81_A Catechol O-methyltransf 65.5 11 0.00037 32.0 6.0 109 112-228 59-171 (221)
113 3cbg_A O-methyltransferase; cy 64.7 23 0.00078 30.4 8.0 109 113-230 74-185 (232)
114 2a14_A Indolethylamine N-methy 64.3 20 0.00068 31.4 7.7 140 113-258 57-233 (263)
115 2b3t_A Protein methyltransfera 63.9 60 0.002 28.4 10.9 119 113-257 111-257 (276)
116 3frh_A 16S rRNA methylase; met 63.6 8.9 0.0003 34.9 5.2 151 91-258 86-237 (253)
117 3njr_A Precorrin-6Y methylase; 62.5 66 0.0023 26.9 10.5 119 112-258 56-175 (204)
118 3sso_A Methyltransferase; macr 62.5 16 0.00056 35.5 7.2 110 96-227 204-324 (419)
119 3tfw_A Putative O-methyltransf 62.5 46 0.0016 28.8 9.7 105 112-229 64-172 (248)
120 4e2x_A TCAB9; kijanose, tetron 62.4 49 0.0017 30.8 10.5 127 112-257 108-247 (416)
121 3ntv_A MW1564 protein; rossman 62.2 34 0.0011 29.3 8.6 104 112-229 72-178 (232)
122 1yzh_A TRNA (guanine-N(7)-)-me 62.1 36 0.0012 28.4 8.7 125 113-258 43-177 (214)
123 2gs9_A Hypothetical protein TT 61.2 63 0.0022 26.5 10.0 93 112-227 37-132 (211)
124 3dr5_A Putative O-methyltransf 60.9 5.8 0.0002 34.4 3.4 105 114-230 59-166 (221)
125 4dzr_A Protein-(glutamine-N5) 60.8 26 0.0009 28.6 7.4 119 112-257 31-186 (215)
126 1fp2_A Isoflavone O-methyltran 58.0 7.1 0.00024 36.0 3.6 95 111-227 188-289 (352)
127 3b3j_A Histone-arginine methyl 57.8 22 0.00076 34.8 7.3 121 93-226 141-262 (480)
128 3bzb_A Uncharacterized protein 57.3 85 0.0029 27.7 10.7 132 113-258 81-232 (281)
129 2hnk_A SAM-dependent O-methylt 56.1 52 0.0018 28.0 8.8 109 113-229 62-183 (239)
130 3c3p_A Methyltransferase; NP_9 55.3 6.8 0.00023 32.9 2.8 102 112-228 57-161 (210)
131 1vlm_A SAM-dependent methyltra 54.9 65 0.0022 26.8 9.1 121 112-257 48-182 (219)
132 2zfu_A Nucleomethylin, cerebra 54.0 68 0.0023 26.4 9.0 106 112-258 68-174 (215)
133 1zg3_A Isoflavanone 4'-O-methy 52.8 33 0.0011 31.4 7.4 95 111-227 193-294 (358)
134 3mti_A RRNA methylase; SAM-dep 52.3 31 0.0011 27.8 6.4 101 113-226 24-134 (185)
135 2gpy_A O-methyltransferase; st 49.1 41 0.0014 28.5 6.9 101 113-227 56-160 (233)
136 2fhp_A Methylase, putative; al 47.9 29 0.00098 27.9 5.5 107 112-228 45-155 (187)
137 3uwp_A Histone-lysine N-methyl 47.8 1.2E+02 0.004 29.6 10.5 104 112-226 174-287 (438)
138 2gb4_A Thiopurine S-methyltran 47.1 1.2E+02 0.0043 26.4 10.0 133 113-258 70-222 (252)
139 3i9f_A Putative type 11 methyl 46.3 64 0.0022 25.4 7.3 92 112-226 18-111 (170)
140 3cc8_A Putative methyltransfer 44.3 92 0.0032 25.4 8.3 127 112-258 33-180 (230)
141 3mq2_A 16S rRNA methyltransfer 44.2 1.3E+02 0.0046 24.7 10.3 131 112-258 28-179 (218)
142 3cvo_A Methyltransferase-like 43.5 1.3E+02 0.0044 25.9 9.2 107 112-227 31-154 (202)
143 3evz_A Methyltransferase; NYSG 43.4 93 0.0032 25.9 8.2 126 112-260 56-203 (230)
144 3hm2_A Precorrin-6Y C5,15-meth 43.3 1.2E+02 0.004 23.8 10.9 119 112-258 26-148 (178)
145 3iv6_A Putative Zn-dependent a 42.7 1E+02 0.0035 27.4 8.8 102 112-227 46-148 (261)
146 2ld4_A Anamorsin; methyltransf 41.2 55 0.0019 26.2 6.2 115 113-258 14-130 (176)
147 3gjy_A Spermidine synthase; AP 41.0 30 0.001 32.1 5.0 40 114-154 92-134 (317)
148 2esr_A Methyltransferase; stru 39.7 89 0.0031 24.8 7.3 105 112-228 32-139 (177)
149 3dxy_A TRNA (guanine-N(7)-)-me 36.4 46 0.0016 28.4 5.2 105 112-226 35-149 (218)
150 3eey_A Putative rRNA methylase 36.2 73 0.0025 25.8 6.3 103 113-226 24-138 (197)
151 3adn_A Spermidine synthase; am 35.5 1.8E+02 0.0062 26.1 9.3 108 110-226 82-197 (294)
152 4fsd_A Arsenic methyltransfera 33.6 75 0.0026 29.4 6.6 109 113-226 85-202 (383)
153 2b2c_A Spermidine synthase; be 33.3 59 0.002 29.8 5.6 108 111-227 108-222 (314)
154 2i7c_A Spermidine synthase; tr 33.2 49 0.0017 29.5 5.0 108 111-227 78-192 (283)
155 1xj5_A Spermidine synthase 1; 32.8 83 0.0028 29.0 6.6 107 111-226 120-234 (334)
156 2lqo_A Putative glutaredoxin R 32.5 1.5E+02 0.0052 21.9 8.3 75 134-216 5-85 (92)
157 2ozv_A Hypothetical protein AT 30.4 1.7E+02 0.0059 25.3 8.1 125 98-228 23-171 (260)
158 4dcm_A Ribosomal RNA large sub 30.3 1.1E+02 0.0036 28.7 7.0 103 113-226 224-333 (375)
159 3mb5_A SAM-dependent methyltra 28.5 1.4E+02 0.0049 25.2 7.1 118 112-257 94-216 (255)
160 4hg2_A Methyltransferase type 28.3 2.1E+02 0.0073 24.9 8.3 92 112-225 40-133 (257)
161 3bwc_A Spermidine synthase; SA 27.7 47 0.0016 30.0 3.9 131 111-256 95-233 (304)
162 1yb2_A Hypothetical protein TA 26.9 1E+02 0.0034 26.9 5.9 117 112-257 111-231 (275)
163 3ckk_A TRNA (guanine-N(7)-)-me 26.8 3E+02 0.01 23.5 9.1 110 112-227 47-168 (235)
164 1mjf_A Spermidine synthase; sp 26.8 1.7E+02 0.0059 25.7 7.5 106 111-227 75-193 (281)
165 2aot_A HMT, histamine N-methyl 25.4 1.8E+02 0.0062 25.3 7.3 127 93-225 31-170 (292)
166 3ege_A Putative methyltransfer 24.2 2.1E+02 0.0073 24.3 7.5 123 112-257 35-172 (261)
167 3lbf_A Protein-L-isoaspartate 24.1 1.3E+02 0.0043 24.6 5.7 97 112-229 78-176 (210)
168 1ej0_A FTSJ; methyltransferase 24.0 1.9E+02 0.0063 22.1 6.5 101 112-226 23-135 (180)
169 2avn_A Ubiquinone/menaquinone 23.5 2.3E+02 0.008 24.0 7.6 109 97-228 43-153 (260)
170 2kzc_A Uncharacterized protein 22.7 40 0.0014 25.6 1.9 34 281-314 15-50 (85)
171 2qfm_A Spermine synthase; sper 21.9 1.8E+02 0.0062 27.5 6.8 110 110-227 187-314 (364)
172 1af7_A Chemotaxis receptor met 21.2 73 0.0025 28.6 3.8 38 190-227 214-252 (274)
No 1
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=100.00 E-value=1.2e-44 Score=344.46 Aligned_cols=232 Identities=23% Similarity=0.363 Sum_probs=193.2
Q ss_pred CChhhHHHHHHHHHHHHhcCCCCCCccCHHHhccCCCCccc---------hhh---------------hhhHHHHHHHHH
Q 021091 42 NDPLLQSAVNAASLRFQETHRPEPLFVDPYAGCLVPPDVQM---------DLK---------------KYSHHYCLTTKF 97 (317)
Q Consensus 42 ~~~vs~TAl~~a~aRA~es~r~~~lf~DP~A~~l~~~~~~~---------~~~---------------~~~~~~~~RTr~ 97 (317)
.++|++||++++++||.|++++++||+||||..|++..... .+. .+..++++||++
T Consensus 11 ~~~V~~Tal~~a~~RA~es~~~~~l~~Dp~A~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rt~~ 90 (310)
T 2uyo_A 11 KTSVGTTAVMVAAARAAETDRPDALIRDPYAKLLVTNTGAGALWEAMLDPSMVAKVEAIDAEAAAMVEHMRSYQAVRTNF 90 (310)
T ss_dssp ---CCHHHHHHHHHHHHHHTSTTCSSCCTTHHHHHHTTSSTTHHHHC------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhhccchhhHHhhccccccccccccccccccchhHHHHHHHHHHH
Confidence 56899999999999999999999999999999999876432 010 134578999999
Q ss_pred HHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHH
Q 021091 98 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQ 177 (317)
Q Consensus 98 iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~ 177 (317)
||++++++++ .|++|||+||||||||+||+++|.+++|||||+|+|+++|+++|.+.+..++.+++++++|+.. +|.
T Consensus 91 ~d~~v~~~~~--~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~ 167 (310)
T 2uyo_A 91 FDTYFNNAVI--DGIRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWP 167 (310)
T ss_dssp HHHHHHHHHH--TTCCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHH
T ss_pred HHHHHHHHHH--hCCCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHH
Confidence 9999999997 5789999999999999999999878999999999999999999998776566788999999987 999
Q ss_pred HHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhh--------h----hhh--cC-----
Q 021091 178 QALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL--------A----ETE--FG----- 237 (317)
Q Consensus 178 ~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~--------~----~~~--~~----- 237 (317)
+.|..+|||+++||+||+||| +||+++++.+||+.|++++++||.+++|+...- . ... .+
T Consensus 168 ~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 247 (310)
T 2uyo_A 168 PALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAV 247 (310)
T ss_dssp HHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC--------
T ss_pred HHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCC
Confidence 999999999999999999999 699999999999999999989999999974211 1 100 01
Q ss_pred ----CCCc-c-hHHHHHHHHhCCCeeeecCHHHHHHHcCCCCCCC
Q 021091 238 ----NKST-T-EKWMDKLFMSNGFGVGMVSYKEVASSLGKELAPG 276 (317)
Q Consensus 238 ----~~~~-~-~~w~~~~l~~~Gw~~~~~~~~~~~~~~gr~~~~~ 276 (317)
.... + ..-..++|.++||+....++.++.++||+++|++
T Consensus 248 ~l~~~~~~~~~~~~~~~~f~~~G~~~~~~~~~e~~~~yg~~~~~~ 292 (310)
T 2uyo_A 248 DVQELIYHDENRAVVADWLNRHGWRATAQSAPDEMRRVGRWGDGV 292 (310)
T ss_dssp ---CCTTCCTTCCCHHHHHTTTTEEEEEEEHHHHHHHTTCCCTTS
T ss_pred CccccccCCCChHHHHHHHHHCcCccccCCHHHHHHHcCCCCCCc
Confidence 0010 1 2235689999999976889999999999987753
No 2
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=100.00 E-value=1.4e-38 Score=305.56 Aligned_cols=227 Identities=14% Similarity=0.131 Sum_probs=176.0
Q ss_pred ccCCCChhhHHHHHHHHHHHHhcCCCCCCccCHHHhccCCCCccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCceEEE
Q 021091 38 LDGENDPLLQSAVNAASLRFQETHRPEPLFVDPYAGCLVPPDVQMDLKKYSHHYCLTTKFIDDKLLRTVNHMDGLKQVVL 117 (317)
Q Consensus 38 ~~~~~~~vs~TAl~~a~aRA~es~r~~~lf~DP~A~~l~~~~~~~~~~~~~~~~~~RTr~iDd~l~~~i~~~~g~~QVV~ 117 (317)
+......|..|.-.++..|..... .+||+|||+..|+++......+.+++++++||++||+.+.+|++.++|.+||||
T Consensus 19 ~~~~d~~V~~T~~da~~sk~sav~--~gY~~Dpf~~~Fv~~~~~rr~P~inrG~~~Rt~~iD~~v~~fl~~~~~~~QVV~ 96 (334)
T 3iei_A 19 MDENDEGVRGTCEDASLCKRFAVS--IGYWHDPYIQHFVRLSKERKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVN 96 (334)
T ss_dssp ------CTTHHHHHHHHHHHHHHH--HTSSCCSSGGGTSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCchhhhhcccHHHHHHHHHHHH--cCCCCCHHHHHHcCcccCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 444667899999999999965442 469999999999986522222336789999999999999999997657889999
Q ss_pred eCCCCCCcccccCCC--CCcEEEEechhhhHHHHHHHHhhcCC--------------------CCCCcceEEeecCCCc-
Q 021091 118 LTDGMDTRPYRLNWP--TSTIIFDISPERIFKISAEKLEGVGA--------------------KIPRSCLFLHVPLESS- 174 (317)
Q Consensus 118 LGAGLDTRa~RL~~~--~~~~~fEVD~P~v~~~K~~~L~~~~~--------------------~~p~~~~~v~vdld~~- 174 (317)
||||||||+|||+++ .+++|||||+|+|+++|+++|++.+. ..+.+++++++|+...
T Consensus 97 LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~ 176 (334)
T 3iei_A 97 LGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLS 176 (334)
T ss_dssp ETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTCHH
T ss_pred eCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEccccccch
Confidence 999999999999875 47999999999999999999986210 0145789999998754
Q ss_pred hHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhh-----------hcCCCCc-
Q 021091 175 NIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAET-----------EFGNKST- 241 (317)
Q Consensus 175 dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~-----------~~~~~~~- 241 (317)
.|.+.|.++|||++.||+||+||| +||+++++.+||+++++.+++|+.++||........ ...+.+.
T Consensus 177 ~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i~p~d~fg~~M~~~l~~~g~pl~sl~ 256 (334)
T 3iei_A 177 ELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVE 256 (334)
T ss_dssp HHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCTTSHHHHHHHHHHHTTTCCCTTGG
T ss_pred hHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEeccCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 456789999999999999999999 799999999999999999988999999975321110 0111111
Q ss_pred ---chHHHHHHHHhCCCee-eecCHHHHH
Q 021091 242 ---TEKWMDKLFMSNGFGV-GMVSYKEVA 266 (317)
Q Consensus 242 ---~~~w~~~~l~~~Gw~~-~~~~~~~~~ 266 (317)
+..-..++|.++||+. ++.+..++.
T Consensus 257 ~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~ 285 (334)
T 3iei_A 257 TCKSLESQKERLLSNGWETASAVDMMELY 285 (334)
T ss_dssp GGGCHHHHHHHHHTTTCSEEEEEEHHHHH
T ss_pred cCCCHHHHHHHHHHcCCCcceeecHHHHH
Confidence 1222357889999996 788887775
No 3
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=100.00 E-value=3.5e-35 Score=281.93 Aligned_cols=218 Identities=12% Similarity=-0.033 Sum_probs=166.6
Q ss_pred hhhHHHHHHHHHHHHhcCCCCCCccCHHHhccCCCC------------------ccc-------h----hhhhhHHHHHH
Q 021091 44 PLLQSAVNAASLRFQETHRPEPLFVDPYAGCLVPPD------------------VQM-------D----LKKYSHHYCLT 94 (317)
Q Consensus 44 ~vs~TAl~~a~aRA~es~r~~~lf~DP~A~~l~~~~------------------~~~-------~----~~~~~~~~~~R 94 (317)
.|+.|+...+..|.... +.+|++|||+..|+... .+. . .+.++.++++|
T Consensus 4 ~vq~T~~da~~sk~sav--~~gY~~D~~~~~~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~~~P~in~g~~~R 81 (334)
T 1rjd_A 4 IIQQTDYDALSCKLAAI--SVGYLPSSGLQRLSVDLSKKYTEWHRSYLITLKKFSRRAFGKVDKAMRSSFPVMNYGTYLR 81 (334)
T ss_dssp HHHTHHHHHHHHHHHHH--HHTSCCCTTTTTCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHH--HcCCCCcHHHHhhhhcccccccccchhhhhhhhhhhhhhccccccchhccCchHHHHHHHH
Confidence 58889999999996544 45799999999888630 000 0 12245789999
Q ss_pred HHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCC-CCcEEEEechhhhHHHHHHHHhhcCCC--------------
Q 021091 95 TKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWP-TSTIIFDISPERIFKISAEKLEGVGAK-------------- 159 (317)
Q Consensus 95 Tr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~-~~~~~fEVD~P~v~~~K~~~L~~~~~~-------------- 159 (317)
|++||+.+.+|++. +|.+||||||||||||+|||+++ ++++|||||+|+|+++|+++|++.+..
T Consensus 82 t~~iD~~v~~fl~~-~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~ 160 (334)
T 1rjd_A 82 TVGIDAAILEFLVA-NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKS 160 (334)
T ss_dssp HHHHHHHHHHHHHH-CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCT
T ss_pred HHHHHHHHHHHHHH-CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhccccccccccc
Confidence 99999999999976 57899999999999999999874 479999999999999999999886210
Q ss_pred ----CCCcceEEeecCCCchHHHH-HHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchh---
Q 021091 160 ----IPRSCLFLHVPLESSNIQQA-LRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW--- 230 (317)
Q Consensus 160 ----~p~~~~~v~vdld~~dw~~~-L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~--- 230 (317)
.+.+++++++|+...+|.+. |.+.| |++.||+||+||| +||+++++.+||+.|++++++|+.++||+...
T Consensus 161 ~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~v~~e~i~~~~~ 239 (334)
T 1rjd_A 161 PFLIDQGRYKLAACDLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQP 239 (334)
T ss_dssp TEEEECSSEEEEECCTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCCCST
T ss_pred ccccCCCceEEEecCCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEEEEEeccCCCCC
Confidence 13578999999998789877 46777 9999999999999 79999999999999999986666678996432
Q ss_pred h---hh---------hhcCCCC----cchHHHHHHHHhCCCeeeecCHHHHH
Q 021091 231 L---AE---------TEFGNKS----TTEKWMDKLFMSNGFGVGMVSYKEVA 266 (317)
Q Consensus 231 ~---~~---------~~~~~~~----~~~~w~~~~l~~~Gw~~~~~~~~~~~ 266 (317)
. .. ....+.+ .+..+..++|.++||. +..+..+..
T Consensus 240 ~~~fg~~m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~-~a~d~~~~y 290 (334)
T 1rjd_A 240 NDRFGAIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV-IVNDMWEIF 290 (334)
T ss_dssp TCCHHHHHHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE-EEEEHHHHH
T ss_pred cchHHHHHHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC-cccCHHHHH
Confidence 0 00 0011111 2344456788888887 545555444
No 4
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=7.1e-31 Score=272.31 Aligned_cols=236 Identities=16% Similarity=0.116 Sum_probs=172.5
Q ss_pred chhhcchhhhhcccCCCChhhHHHHHHHHHHHHhcCCCCCCccC----------------HHHhccCCCCccchhhhhhH
Q 021091 26 KTKKHGVLLRAKLDGENDPLLQSAVNAASLRFQETHRPEPLFVD----------------PYAGCLVPPDVQMDLKKYSH 89 (317)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~vs~TAl~~a~aRA~es~r~~~lf~D----------------P~A~~l~~~~~~~~~~~~~~ 89 (317)
|+|||-. -.-+.......|..|+-..+..|.. . ..+|+.| |||..|+++..+.. +.+++
T Consensus 9 ~~~~~~~-~~~~~~~~~~~v~~t~~~a~~~k~s-v--~~~y~~d~~~~~~~~~~~~~~~~~~a~~fv~~~~~r~-p~inr 83 (695)
T 2zwa_A 9 QTNKNVK-QERRKKYADLAIQGTNNSSIASKRS-V--ELLYLPKLSSANNFQMDKNNKLLEYFKFFVPKKIKRS-PCINR 83 (695)
T ss_dssp --------CHHHHHHHHHHHHTHHHHHHHHHHH-H--HHHTGGGSCGGGCSCBCTTSCBCCSGGGGCSSCCCCC-HHHHH
T ss_pred hhcccch-hhccccccchhhhccchHHHHHHHH-H--HhcCccCcccccccccccccccchHHHHhCCCccccC-ceEch
Confidence 4444443 2222333456799999999888866 2 3469999 99999998765332 22567
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCCceEEEeCCCCCCcccccC---------CCCCcEEEEechhhhHHHHHHHHhhcC-
Q 021091 90 HYCLTTKFIDDKLLRTVNHM--DGLKQVVLLTDGMDTRPYRLN---------WPTSTIIFDISPERIFKISAEKLEGVG- 157 (317)
Q Consensus 90 ~~~~RTr~iDd~l~~~i~~~--~g~~QVV~LGAGLDTRa~RL~---------~~~~~~~fEVD~P~v~~~K~~~L~~~~- 157 (317)
++++|++.||+.+.+|++.+ .+.+|||+||||||||+|||. |+.+++|||||+|+|+++|+++|++..
T Consensus 84 G~~~R~~~~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~ 163 (695)
T 2zwa_A 84 GYWLRLFAIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPE 163 (695)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHH
T ss_pred hhhHHHHHHHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChH
Confidence 89999999999999999875 368899999999999999993 345799999999999999999998432
Q ss_pred ------------CCCC--------CcceEEeecCCCc-hHHHHHHhcCC-CCCCCEEEEEcCC-CCCCHHHHHHHHHHHH
Q 021091 158 ------------AKIP--------RSCLFLHVPLESS-NIQQALRAKGF-NGNRPSVWAIQGL-PVMTLASFEDVLLLVG 214 (317)
Q Consensus 158 ------------~~~p--------~~~~~v~vdld~~-dw~~~L~~~Gf-d~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia 214 (317)
..++ .+++++++|+... .|.+.|..+|| |++.||+||+||| +||+++++++||+.++
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~ 243 (695)
T 2zwa_A 164 LSKIIGLSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATS 243 (695)
T ss_dssp HHHHTTCCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHH
T ss_pred HHHhhccccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHh
Confidence 0111 3788999999864 56688999999 9999999999999 7999999999999999
Q ss_pred hccCCCcEEEEeCchhh------hh-----hh---cCCCC----cchHHHHHHHHhCCCe-eeecCHHHHHH
Q 021091 215 SLAMNKCLFLGELPAWL------AE-----TE---FGNKS----TTEKWMDKLFMSNGFG-VGMVSYKEVAS 267 (317)
Q Consensus 215 ~ls~~gS~l~~d~~~~~------~~-----~~---~~~~~----~~~~w~~~~l~~~Gw~-~~~~~~~~~~~ 267 (317)
++ ++++.+.||..... .. .. ..+.+ .+..-..++|.++||. +...+..++..
T Consensus 244 ~~-~~~~~~~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~~~y~ 314 (695)
T 2zwa_A 244 KM-ENSHFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMFQLWE 314 (695)
T ss_dssp TS-SSEEEEEEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHHHHHH
T ss_pred hC-CCceEEEEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHHHHHh
Confidence 86 46677888853221 00 00 01111 1222246889999998 56666666543
No 5
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.80 E-value=3.5e-08 Score=92.22 Aligned_cols=127 Identities=8% Similarity=0.129 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCccccc-----CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEee
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-----NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHV 169 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL-----~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~v 169 (317)
.|+...++..... .|++||+-||||++|..... -+| +.+++-||. |.|++.+++++.+.. +.+++++..
T Consensus 64 ~fl~rav~~l~~~-~g~~q~LDLGcG~pT~~~~~~la~~~~P-~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~a 138 (277)
T 3giw_A 64 DWMNRAVAHLAKE-AGIRQFLDIGTGIPTSPNLHEIAQSVAP-ESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHHHHT-SCCCEEEEESCCSCCSSCHHHHHHHHCT-TCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEEC
T ss_pred HHHHHHHHHhccc-cCCCEEEEeCCCCCcccHHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEe
Confidence 5666666544322 58899999999999864332 245 578888998 899999999887642 247889999
Q ss_pred cCCCch--HHHHHHhcCCCCCCCEEEEEcCCC-CCCHHH-HHHHHHHHHhccCCCcEEEEeC
Q 021091 170 PLESSN--IQQALRAKGFNGNRPSVWAIQGLP-VMTLAS-FEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 170 dld~~d--w~~~L~~~Gfd~~~Ptl~i~EGv~-YL~~~~-v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
|+...+ |...+...+||.++|+.+++-+++ |++.++ ...+|+.+.+..+|||.+++..
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 987422 122334677999999999999995 898865 6889999999999999988753
No 6
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.49 E-value=8.9e-07 Score=81.64 Aligned_cols=129 Identities=9% Similarity=0.055 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcc---cccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcce
Q 021091 92 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRP---YRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCL 165 (317)
Q Consensus 92 ~~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa---~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~ 165 (317)
..+..|++..+...... .+..||+-||||..|.. .++. .| +.+++-||. |.+++..++.+... .+++
T Consensus 59 ~~~~~~~~~~~~~l~~~-~~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~ 131 (274)
T 2qe6_A 59 IENRKVLVRGVRFLAGE-AGISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKD-----PNTA 131 (274)
T ss_dssp HHHHHHHHHHHHHHHTT-TCCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTC-----TTEE
T ss_pred HHHhHHHHHHHHHHhhc-cCCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCC-----CCeE
Confidence 34556777776554312 46789999999995542 2331 33 466777777 89999888877532 3789
Q ss_pred EEeecCCCchHHHH-HH-hcCCCCCCCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 166 FLHVPLESSNIQQA-LR-AKGFNGNRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 166 ~v~vdld~~dw~~~-L~-~~Gfd~~~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
++..|+...+|.-. .. ...++.+.+.++++.+++ |++.++...+|+.+.+...||+.+++..
T Consensus 132 ~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 132 VFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp EEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 99999876555311 10 123676789999999994 8988788999999999888999877653
No 7
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.42 E-value=0.022 Score=53.79 Aligned_cols=136 Identities=10% Similarity=-0.029 Sum_probs=88.8
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...||-+|||.=.-...+ .+| ++++.-.|+|+|++.-++.++..+ .+++.++..|+..+.+ ++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dlp~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~----------~~ 244 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYP-GCKITVFDIPEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPL----------PE 244 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEECHHHHHHHHHHSCC-----CCSEEEEESCTTTSCC----------CC
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccCHHHHHHHHHhhhhcc---cCceeeecCccccCCC----------CC
Confidence 4568999999987666555 355 577888899999987777665432 3489999999864321 22
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcE-EEEeCc--hh-----hh---hhhc----CCCCcchHHHHHHHHhC
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCL-FLGELP--AW-----LA---ETEF----GNKSTTEKWMDKLFMSN 253 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~-l~~d~~--~~-----~~---~~~~----~~~~~~~~w~~~~l~~~ 253 (317)
.-.+++...+-+++.++...+|+.+.+...||+. ++.|.. .. .. +..+ +-+..+..-..++|.+.
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~A 324 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSA 324 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHC
Confidence 2355555444578999999999999998888885 566752 11 11 1111 11222333235899999
Q ss_pred CCee-eec
Q 021091 254 GFGV-GMV 260 (317)
Q Consensus 254 Gw~~-~~~ 260 (317)
||+. ++.
T Consensus 325 Gf~~v~v~ 332 (353)
T 4a6d_A 325 GFRDFQFK 332 (353)
T ss_dssp TCEEEEEE
T ss_pred CCceEEEE
Confidence 9985 544
No 8
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.38 E-value=0.044 Score=47.04 Aligned_cols=144 Identities=14% Similarity=0.105 Sum_probs=84.9
Q ss_pred CceEEEeCCCCCCcccccC-CCCCcEEEEech-hhhHHHHHHHHhhcCCCC--CCcceEEeecCCCchHHHHHHhcCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN-WPTSTIIFDISP-ERIFKISAEKLEGVGAKI--PRSCLFLHVPLESSNIQQALRAKGFNG 187 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~-~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~--p~~~~~v~vdld~~dw~~~L~~~Gfd~ 187 (317)
...|+-+|||.=.-...+. ......++=||. |++++.-++.++..+... ..+++++..|+...+. ....||
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~fD- 104 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK----RFHGYD- 104 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG----GGCSCS-
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc----cCCCcC-
Confidence 3589999999765554452 112346666665 566665555555433110 1157888888753221 112344
Q ss_pred CCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhh-hhh---h-cC-------C---CCcchHHHHHHHH
Q 021091 188 NRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL-AET---E-FG-------N---KSTTEKWMDKLFM 251 (317)
Q Consensus 188 ~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~-~~~---~-~~-------~---~~~~~~w~~~~l~ 251 (317)
++++-.+ -|++.++...+++.+.+...||+.+++...... ... . .. . ...-..|+.+++.
T Consensus 105 ----~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 105 ----AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp ----EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHH
T ss_pred ----EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHH
Confidence 4445555 589988899999999999889887665432211 000 0 00 0 1112467779999
Q ss_pred hCCCeeeecCHHH
Q 021091 252 SNGFGVGMVSYKE 264 (317)
Q Consensus 252 ~~Gw~~~~~~~~~ 264 (317)
.+||+++....++
T Consensus 181 ~~Gf~v~~~~~g~ 193 (217)
T 3jwh_A 181 RFAYNVQFQPIGE 193 (217)
T ss_dssp HSSEEEEECCCSC
T ss_pred HcCceEEEEecCC
Confidence 9999998765444
No 9
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.23 E-value=0.053 Score=46.51 Aligned_cols=158 Identities=10% Similarity=0.048 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCC-CCCcEEEEech-hhhHHHHHHHHhhcCCCC--CCcceEEe
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNW-PTSTIIFDISP-ERIFKISAEKLEGVGAKI--PRSCLFLH 168 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~-~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~--p~~~~~v~ 168 (317)
.|..++-+.+.. .+...|+-+|||.=.-...+.. .....++=||. |++++.-++.+...+... ..++.++.
T Consensus 16 ~~~~~l~~~l~~-----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (219)
T 3jwg_A 16 QRLGTVVAVLKS-----VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHH-----TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE
T ss_pred HHHHHHHHHHhh-----cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe
Confidence 344444444433 2345899999997765555521 12256666665 556665555554432110 01577888
Q ss_pred ecCCCchHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhh-h------h---cC
Q 021091 169 VPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAE-T------E---FG 237 (317)
Q Consensus 169 vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~-~------~---~~ 237 (317)
.|+...+. ....|| ++++-.+ -|++.++...+++.+.+...||..++......... . . ..
T Consensus 91 ~d~~~~~~----~~~~fD-----~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~ 161 (219)
T 3jwg_A 91 SSLVYRDK----RFSGYD-----AATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRD 161 (219)
T ss_dssp CCSSSCCG----GGTTCS-----EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGC
T ss_pred Cccccccc----ccCCCC-----EEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccC
Confidence 88753221 112344 4555555 58988888999999999988888665542211100 0 0 00
Q ss_pred --C---CCcchHHHHHHHHhCCCeeeecCHHH
Q 021091 238 --N---KSTTEKWMDKLFMSNGFGVGMVSYKE 264 (317)
Q Consensus 238 --~---~~~~~~w~~~~l~~~Gw~~~~~~~~~ 264 (317)
. ...-..|..+++..+||+++....++
T Consensus 162 ~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~ 193 (219)
T 3jwg_A 162 HRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGE 193 (219)
T ss_dssp CTTSBCHHHHHHHHHHHHHHHTEEEEEEEESC
T ss_pred ceeeecHHHHHHHHHHHHHHCCcEEEEEecCC
Confidence 0 11124566788999999987654433
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=95.12 E-value=0.17 Score=45.77 Aligned_cols=115 Identities=13% Similarity=0.088 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCccccc--CC-CCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecC
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NW-PTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPL 171 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL--~~-~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdl 171 (317)
..+..++.+++. +| ..|+-||||.=.-...| .. .++++++=||. |++++.-++.+++.+. ..+++++..|+
T Consensus 58 ~~i~~l~~~~~~--~~-~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~--~~~v~~~~~D~ 132 (261)
T 4gek_A 58 SMIGMLAERFVQ--PG-TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA--PTPVDVIEGDI 132 (261)
T ss_dssp HHHHHHHHHHCC--TT-CEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCT
T ss_pred HHHHHHHHHhCC--CC-CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc--CceEEEeeccc
Confidence 344555556654 44 58999999876433333 11 24688999997 7788876677766542 23688888887
Q ss_pred CCchHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEE-Ee
Q 021091 172 ESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GE 226 (317)
Q Consensus 172 d~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~-~d 226 (317)
..-. + ..-.++++-.+ .|++.++-..+|+.|.+...||+.++ .|
T Consensus 133 ~~~~---------~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 133 RDIA---------I--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp TTCC---------C--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc---------c--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 5211 1 12345666566 48998888899999999888888755 45
No 11
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.11 E-value=0.16 Score=47.86 Aligned_cols=133 Identities=16% Similarity=0.159 Sum_probs=87.2
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...||-+|||-=.-...+ ..| +.+++-+|.|++++.-++.+.+.+. ..+++++..|+. +.+.. +||
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~l--~~~v~~~~~d~~-~~~p~-----~~D-- 270 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLERPPVAEEARELLTGRGL--ADRCEILPGDFF-ETIPD-----GAD-- 270 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEECCTT-TCCCS-----SCS--
T ss_pred cCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcCHHHHHHHHHhhhhcCc--CCceEEeccCCC-CCCCC-----Cce--
Confidence 4579999999977655444 244 5677888889998877777766542 247899999986 22211 454
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeCc--h----h--hhhhh----cCCCCcchHHHHHHHHhCC
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GELP--A----W--LAETE----FGNKSTTEKWMDKLFMSNG 254 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~-~d~~--~----~--~~~~~----~~~~~~~~~w~~~~l~~~G 254 (317)
++++-.+ .|++.++...+|+.+.+...||+.++ .|.. . . ..+.. .+.+..+.....++|.+.|
T Consensus 271 ---~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 271 ---VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred ---EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 4455555 58999998999999999988988754 4532 1 0 00110 1122233333458899999
Q ss_pred Cee
Q 021091 255 FGV 257 (317)
Q Consensus 255 w~~ 257 (317)
|+.
T Consensus 348 f~~ 350 (369)
T 3gwz_A 348 LRV 350 (369)
T ss_dssp EEE
T ss_pred CeE
Confidence 996
No 12
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.97 E-value=0.1 Score=48.34 Aligned_cols=136 Identities=11% Similarity=0.097 Sum_probs=87.4
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+...+. ..+++++..|+..... ....+||
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~---~~~~~~D--- 250 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDLPTTRDAARKTIHAHDL--GGRVEFFEKNLLDARN---FEGGAAD--- 250 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTC--GGGEEEEECCTTCGGG---GTTCCEE---
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHHhcCC--CCceEEEeCCcccCcc---cCCCCcc---
Confidence 569999999976544444 244 4777788889998877776666532 2368899999874331 0112333
Q ss_pred CEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeCc--h-----hhh---hhh----c-CCCCcchHHHHHHHHh
Q 021091 190 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGELP--A-----WLA---ETE----F-GNKSTTEKWMDKLFMS 252 (317)
Q Consensus 190 Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~~--~-----~~~---~~~----~-~~~~~~~~w~~~~l~~ 252 (317)
++++-.+ .+++.++...+|+.+.+...||+.+ +.|.. . ... +.. . +.+..+.....++|.+
T Consensus 251 --~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 251 --VVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp --EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred --EEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 5555556 5889999999999999988888865 45532 1 000 000 0 1223344445689999
Q ss_pred CCCeee
Q 021091 253 NGFGVG 258 (317)
Q Consensus 253 ~Gw~~~ 258 (317)
+||++.
T Consensus 329 aGf~~~ 334 (352)
T 3mcz_A 329 AGLAVG 334 (352)
T ss_dssp TTCEEE
T ss_pred CCCcee
Confidence 999964
No 13
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=94.70 E-value=0.088 Score=47.71 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=66.9
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-||||.=.-...|... +..++=||. |.+++.-++.+...+.....+++++..|+..-.. ...|| .
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD----~ 153 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-----DKRFG----T 153 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-----SCCEE----E
T ss_pred CcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-----CCCcC----E
Confidence 38999999987665555322 345666665 5566655555554321001367888888763211 12232 3
Q ss_pred EEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 192 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 192 l~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
+++.-++ .|+++++...+|+.+.+...||+.++++.
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 3334455 48898899999999999988999888764
No 14
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=94.58 E-value=0.18 Score=47.42 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=74.0
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCch--HHHHHHhcCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN--IQQALRAKGFN 186 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~d--w~~~L~~~Gfd 186 (317)
+...|+-+|||-=.-...+ ..| +.+++-+|.|++++.-++.+++.+. +.+++++..|+...+ +. .+||
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~p-----~~~D 250 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDLPQQLEMMRKQTAGLSG--SERIHGHGANLLDRDVPFP-----TGFD 250 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHST-TCEEEEEECHHHHHHHHHHHTTCTT--GGGEEEEECCCCSSSCCCC-----CCCS
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeCHHHHHHHHHHHHhcCc--ccceEEEEccccccCCCCC-----CCcC
Confidence 4579999999987665555 234 4678888889998877777765432 247889999987432 21 2454
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 021091 187 GNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLF-LGEL 227 (317)
Q Consensus 187 ~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~ 227 (317)
.+++...+.+++.++...+|+.+.+...||+.+ +.|.
T Consensus 251 ----~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 251 ----AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ----EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ----EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 444444335789999999999999988888875 5564
No 15
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=94.52 E-value=0.53 Score=42.72 Aligned_cols=121 Identities=8% Similarity=-0.038 Sum_probs=75.4
Q ss_pred HHHHHH--HHHHHHHHHhccCCCceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceE
Q 021091 92 CLTTKF--IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLF 166 (317)
Q Consensus 92 ~~RTr~--iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~ 166 (317)
..|.++ +...+...+. + ...|+-+|||.=.-...+ ....+..++=+|. |++++.-++.+...+. +.++++
T Consensus 100 ~~~~~~~~~~~~l~~~l~--~-~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~ 174 (305)
T 3ocj_A 100 ATRERHGHFRRALQRHLR--P-GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL--AGQITL 174 (305)
T ss_dssp HHHHHHHHHHHHHHHHCC--T-TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT--GGGEEE
T ss_pred cchHHHHHHHHHHHhhCC--C-CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC--CCceEE
Confidence 345444 6666655443 3 358999999975544444 2223567777776 6666655555555432 235778
Q ss_pred EeecCCCchHHHHHHhcCCCCCCCEEEEEcCC-CCC-CHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 167 LHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 167 v~vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL-~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
+..|+..-. ++ +.--++++-++ .|+ +++....+++.+.+...||+.+++..
T Consensus 175 ~~~d~~~~~---------~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 175 HRQDAWKLD---------TR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EECCGGGCC---------CC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECchhcCC---------cc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 887765211 22 34456777777 466 56777789999999888888877553
No 16
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.42 E-value=0.5 Score=41.80 Aligned_cols=100 Identities=16% Similarity=0.081 Sum_probs=61.5
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||-=.-...+ ..| +.+++=+|. |.+++.-++.+...+. .++.++..|+.... +..+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~---------~~~~ 104 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGI---KNVKFLQANIFSLP---------FEDS 104 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGCC---------SCTT
T ss_pred CCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEcccccCC---------CCCC
Confidence 458999999976544444 233 466777776 5566655555555432 26777777765211 2223
Q ss_pred CCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 189 RPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 189 ~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.--++++-.++ +++.. ..+++.+.++..||+.+++.
T Consensus 105 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEE
Confidence 34466666664 56433 37888888888888877653
No 17
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.38 E-value=0.085 Score=48.71 Aligned_cols=132 Identities=13% Similarity=0.034 Sum_probs=85.3
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||-=.-...+ ..| +.++.-+|.|++++.-++.+.+.+. ..+++++..|+. +.+.. +||
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-~~~p~-----~~D--- 237 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDLQGPASAAHRRFLDTGL--SGRAQVVVGSFF-DPLPA-----GAG--- 237 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEECCTT-SCCCC-----SCS---
T ss_pred CCEEEEeCCChhHHHHHHHHHCC-CCeEEEecCHHHHHHHHHhhhhcCc--CcCeEEecCCCC-CCCCC-----CCc---
Confidence 468999999977655455 234 4667777889999877777766542 247899999986 33211 455
Q ss_pred CEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeCc--hh----hhhhh----cCCCCcchHHHHHHHHhCCCee
Q 021091 190 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGELP--AW----LAETE----FGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 190 Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~~--~~----~~~~~----~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
++++-.+ .|++.++..++|+.+.+...||+.+ +.|.. .. ..+.. .+.+..+..-..++|.++||+.
T Consensus 238 --~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 238 --GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp --EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred --EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 4444555 5899998999999999988888875 45542 11 00110 1112223333458899999986
No 18
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=94.37 E-value=0.099 Score=45.37 Aligned_cols=131 Identities=8% Similarity=-0.031 Sum_probs=81.3
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...|..+ +..++=+|. |.+++.-++.+...+. ..++.++..|+.... ....| -
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~-----~~~~f-----D 134 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPK--AEYFSFVKEDVFTWR-----PTELF-----D 134 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGG--GGGEEEECCCTTTCC-----CSSCE-----E
T ss_pred CCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCC--CcceEEEECchhcCC-----CCCCe-----e
Confidence 48999999986655555433 567888887 6666655555544211 135778888876311 11123 3
Q ss_pred EEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCchhhhhhhcCCCCcchHHHHHHHHhCCCee
Q 021091 192 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 192 l~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
++++-++ .|+++++...+++.+.++..||+.+++ ++....... ......+...+.++|.++||++
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG-GPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS-CSSCCCCHHHHHHHHGGGTEEE
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC-CCCccCCHHHHHHHHHHcCCeE
Confidence 5666666 589988899999999998888887654 443211000 0011123444678899999996
No 19
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=93.35 E-value=2.9 Score=37.28 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=62.7
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNG 187 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~ 187 (317)
....|+-+|||.=.-...+ ..|.+..++=+|. |.+++.-++.+... +.++.++..|+.. |. + +
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~--~~-------~-~ 87 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATE--IE-------L-N 87 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTT--CC-------C-S
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhh--cC-------c-C
Confidence 3468999999987655555 2344467777776 55555544544443 2267888888763 21 1 1
Q ss_pred CCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 188 NRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 188 ~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
+.--++++-++ .+++. ...+++.+.++..||+.+++-
T Consensus 88 ~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMTT--PETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp SCEEEEEEESCGGGCSS--HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCeeEEEECChhhcCCC--HHHHHHHHHHHcCCCCEEEEE
Confidence 23346666666 45643 357888888888888877644
No 20
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=93.21 E-value=0.47 Score=42.28 Aligned_cols=116 Identities=11% Similarity=0.027 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCc
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 174 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~ 174 (317)
+.++.++... .. .....|+-+|||.=.-...+....+..++=+|. |+.++.-++.+...+. ..+++++..|+.
T Consensus 51 ~~~~~~~~~~-~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~-- 124 (287)
T 1kpg_A 51 AKIDLALGKL-GL-QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN--LRSKRVLLAGWE-- 124 (287)
T ss_dssp HHHHHHHTTT-TC-CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC--CSCEEEEESCGG--
T ss_pred HHHHHHHHHc-CC-CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--CCCeEEEECChh--
Confidence 4455554433 21 223589999999865444442101236666665 5555555555555432 236777777764
Q ss_pred hHHHHHHhcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 175 NIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 175 dw~~~L~~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
++. ..|| .++..+.+.+++.++...+|+.+.++..||+.+++.
T Consensus 125 ~~~-----~~fD----~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 125 QFD-----EPVD----RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp GCC-----CCCS----EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred hCC-----CCee----EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 221 2344 444444335787777788999999988898887654
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.85 E-value=1.1 Score=38.02 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=62.3
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+. .+++++..|+..-.. . ..||
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~----~-~~fD---- 108 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEV----P-TSID---- 108 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCC----C-SCCS----
T ss_pred CCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCC----C-CCeE----
Confidence 358999999987655555322 456777776 555554333332 257778877763211 0 2344
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
++++-++ .+++..+...+|+.+.+...||+.+++.
T Consensus 109 -~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 109 -TIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp -EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred -EEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4555566 5788887778999999988888876654
No 22
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=92.68 E-value=0.37 Score=40.49 Aligned_cols=101 Identities=6% Similarity=-0.010 Sum_probs=64.2
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...+....+..++=+|. |++++.-++.++..+. ..+++++..|+..-. +..+.--
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~---------~~~~~~D 113 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL--NDRIQIVQGDVHNIP---------IEDNYAD 113 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECBTTBCS---------SCTTCEE
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc--cCceEEEEcCHHHCC---------CCccccc
Confidence 389999999876555552212466777776 6666665666665542 236888888876321 2223344
Q ss_pred EEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 192 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 192 l~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
++++-++ .++ ++...+|+.+.++..||+.+++.
T Consensus 114 ~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 114 LIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEE
Confidence 6666666 456 34567888888888888876653
No 23
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=92.67 E-value=2.4 Score=37.36 Aligned_cols=107 Identities=11% Similarity=0.001 Sum_probs=64.7
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+...+...++=+|. |++++.-++.+...+. ..+++++..|+....+. ..+.-
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~--------~~~~f 134 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR--RFKVFFRAQDSYGRHMD--------LGKEF 134 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC--SSEEEEEESCTTTSCCC--------CSSCE
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC--CccEEEEECCccccccC--------CCCCc
Confidence 3589999998654333342111235666665 4555544444554331 13577888887632110 11223
Q ss_pred EEEEEcCC-CC--CCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 191 SVWAIQGL-PV--MTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 191 tl~i~EGv-~Y--L~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
-++++-++ .| .+.++...+|+.+.++..||+.+++..+
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 45566566 46 5778889999999999889998887654
No 24
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=92.63 E-value=0.22 Score=43.43 Aligned_cols=117 Identities=12% Similarity=0.188 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCc
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 174 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~ 174 (317)
.++...+..... .....|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+ .+++++..|+...
T Consensus 28 ~~~~~~~~~~~~--~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~ 100 (252)
T 1wzn_A 28 DFVEEIFKEDAK--REVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEI 100 (252)
T ss_dssp HHHHHHHHHTCS--SCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGC
T ss_pred HHHHHHHHHhcc--cCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhc
Confidence 455555554321 22358999999976544444222 456777776 566665555555442 1567777776521
Q ss_pred hHHHHHHhcCCCCCCCEEEEEc-CC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 175 NIQQALRAKGFNGNRPSVWAIQ-GL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 175 dw~~~L~~~Gfd~~~Ptl~i~E-Gv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
. +. +.--++++- +. .|++.++...+|+.+.++..||+.++++.+.
T Consensus 101 ~---------~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 101 A---------FK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp C---------CC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c---------cC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 1 11 122344443 44 4888889999999999988899999888654
No 25
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=92.62 E-value=0.9 Score=40.94 Aligned_cols=118 Identities=8% Similarity=0.032 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCC
Q 021091 94 TTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLE 172 (317)
Q Consensus 94 RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld 172 (317)
+.+.++..+... .. .+...|+-+|||-=.-...+....+.+++=||. |++++.-++.++..+. +.+++++..|+.
T Consensus 57 ~~~~~~~~~~~~-~~-~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~ 132 (302)
T 3hem_A 57 QYAKRKLALDKL-NL-EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHHHHTT-CC-CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGG
T ss_pred HHHHHHHHHHHc-CC-CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHH
Confidence 344566665543 21 233589999999755444442110256666776 5666665666665542 236777777764
Q ss_pred CchHHHHHHhcCCCCCCCEEEEEcCCCCC-------CHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 173 SSNIQQALRAKGFNGNRPSVWAIQGLPVM-------TLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 173 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~YL-------~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
++ ...|| .++..+.+.++ ..+....+++.+.++..||+.+++.
T Consensus 133 --~~-----~~~fD----~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 133 --EF-----DEPVD----RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp --GC-----CCCCS----EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred --Hc-----CCCcc----EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 22 23344 45555444577 4577889999999999898887654
No 26
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=92.60 E-value=0.48 Score=43.21 Aligned_cols=137 Identities=12% Similarity=0.089 Sum_probs=83.6
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...|+-+|||.=.-...+ ..| +.+++=+|.+++++.-++.+...+. +.+++++..|+....+ ++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~----------~~ 231 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWASVLEVAKENARIQGV--ASRYHTIAGSAFEVDY----------GN 231 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHHTC--GGGEEEEESCTTTSCC----------CS
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCC--CcceEEEecccccCCC----------CC
Confidence 3468999999976555444 233 4566777776777665555555432 2368888888764221 11
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcE-EEEeCchh-------hh---hhh----c-CCCCcchHHHHHHHH
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCL-FLGELPAW-------LA---ETE----F-GNKSTTEKWMDKLFM 251 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~-l~~d~~~~-------~~---~~~----~-~~~~~~~~w~~~~l~ 251 (317)
.--++++-.+ .|++.++...+|+.+.+...||+. ++.|.... .. +.. . ..+..+.....++|.
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~ 311 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFS 311 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHH
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHH
Confidence 1345566566 478888889999999998888885 55664211 00 000 0 122223333468899
Q ss_pred hCCCee-eec
Q 021091 252 SNGFGV-GMV 260 (317)
Q Consensus 252 ~~Gw~~-~~~ 260 (317)
++||+. +..
T Consensus 312 ~aGf~~~~~~ 321 (335)
T 2r3s_A 312 NAGFSHSQLH 321 (335)
T ss_dssp HTTCSEEEEE
T ss_pred HCCCCeeeEE
Confidence 999985 443
No 27
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=92.54 E-value=0.26 Score=41.79 Aligned_cols=126 Identities=10% Similarity=0.039 Sum_probs=75.3
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+ +..++..|+..-. . .+.-
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-----~-----~~~f 103 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-----A-----IDAY 103 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-----C-----CSCE
T ss_pred CCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-----C-----CCcE
Confidence 458999999987655555322 456677776 45554433332 2334555554211 1 1223
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhh----cCCCCcchHHHHHHHHhCC-Cee
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETE----FGNKSTTEKWMDKLFMSNG-FGV 257 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~----~~~~~~~~~w~~~~l~~~G-w~~ 257 (317)
-++++-++ .|++.++...+|+.+.+...||+.+++..+....... ......+...+.++|.++| |++
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEE
Confidence 45666666 5899889999999999998899888776432111000 0011224455678899999 996
No 28
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=92.50 E-value=0.61 Score=42.34 Aligned_cols=101 Identities=10% Similarity=0.059 Sum_probs=63.3
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...+....+..++=+|. |++++.-++.+...+. ..++.++..|+.. + . ..|| .
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~--~----~-~~fD----~ 158 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT--NRSRQVLLQGWED--F----A-EPVD----R 158 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCGGG--C----C-CCCS----E
T ss_pred CEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECChHH--C----C-CCcC----E
Confidence 589999999754333332110346777776 5566655555555432 2357777777642 2 1 2344 4
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 192 VWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 192 l~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
++..+.+.+++.++...+|+.+.+...||+.+++.
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 44444445788778889999999988898887754
No 29
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=91.97 E-value=0.38 Score=43.79 Aligned_cols=134 Identities=11% Similarity=0.031 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCC----CCCCcceE
Q 021091 92 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGA----KIPRSCLF 166 (317)
Q Consensus 92 ~~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~----~~p~~~~~ 166 (317)
.++...++.++.......+....|+-+|||--.-...+.......++=+|. |++++.-++.+...+. ....+.++
T Consensus 15 ~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 94 (313)
T 3bgv_A 15 WMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEF 94 (313)
T ss_dssp HHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEE
T ss_pred HHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEE
Confidence 445566666655443211134589999998544333332112456777776 4555544444443210 01125778
Q ss_pred EeecCCCchHHHHHHhcCCCCCCCEEEEEcCC-CCC--CHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 167 LHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM--TLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 167 v~vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL--~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
+..|+....+.+.+... ...--++++-.+ .|+ +.++...+|+.+.+...||+.+++..+
T Consensus 95 ~~~D~~~~~~~~~~~~~---~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 95 ITADSSKELLIDKFRDP---QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp EECCTTTSCSTTTCSST---TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEecccccchhhhcccC---CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 88887643322212100 112345555555 476 667888999999998889998887754
No 30
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=91.96 E-value=1.2 Score=37.27 Aligned_cols=102 Identities=12% Similarity=-0.031 Sum_probs=65.0
Q ss_pred CceEEEeCCCCCCcccc-cCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYR-LNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~R-L~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||--.-... +..+ +..++=+|. |++++.-++.+...+ .+.+++..|+.... +..+.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---------~~~~~ 89 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLP---------FKDES 89 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCC---------SCTTC
T ss_pred CCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCC---------CCCCc
Confidence 46899999996554222 2222 456777776 455555444444432 25777887776321 21223
Q ss_pred CEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 190 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 190 Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
--++++-++ .+++.++...+++.+.+...||+.+++..
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 346666667 47888889999999999888988877664
No 31
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=91.64 E-value=0.31 Score=45.40 Aligned_cols=131 Identities=8% Similarity=0.028 Sum_probs=82.9
Q ss_pred CCCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCC
Q 021091 110 DGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNG 187 (317)
Q Consensus 110 ~g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~ 187 (317)
++...||-+|||-=.-...+ ..| +.+++-+|.|+++. + +.++..+ ...+++++..|+. +.+. +||
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~-~-~~~~~~~--~~~~v~~~~~d~~-~~~p------~~D- 249 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRAEVVA-R-HRLDAPD--VAGRWKVVEGDFL-REVP------HAD- 249 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECHHHHT-T-CCCCCGG--GTTSEEEEECCTT-TCCC------CCS-
T ss_pred cCCceEEEECCccCHHHHHHHHHCC-CCEEEEecCHHHhh-c-ccccccC--CCCCeEEEecCCC-CCCC------CCc-
Confidence 34578999999987655555 244 57889999998876 2 2222211 1246889999985 2221 465
Q ss_pred CCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeCc--hh----hh---hhh----cCCCCcchHHHHHHHHh
Q 021091 188 NRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGELP--AW----LA---ETE----FGNKSTTEKWMDKLFMS 252 (317)
Q Consensus 188 ~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~~--~~----~~---~~~----~~~~~~~~~w~~~~l~~ 252 (317)
++++-.+ .+++.++...+|+.+.+...||+.+ +.|.. .. .. +.. .+.+..+.....++|.+
T Consensus 250 ----~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~ 325 (348)
T 3lst_A 250 ----VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTA 325 (348)
T ss_dssp ----EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHH
T ss_pred ----EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHH
Confidence 4455555 4789888899999999998898875 45542 10 00 000 11122233334688999
Q ss_pred CCCee
Q 021091 253 NGFGV 257 (317)
Q Consensus 253 ~Gw~~ 257 (317)
.||+.
T Consensus 326 aGf~~ 330 (348)
T 3lst_A 326 AGLRL 330 (348)
T ss_dssp TTEEE
T ss_pred CCCce
Confidence 99996
No 32
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=91.62 E-value=0.51 Score=43.49 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeCCC--CCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCC---CCcce
Q 021091 92 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDG--MDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKI---PRSCL 165 (317)
Q Consensus 92 ~~RTr~iDd~l~~~i~~~~g~~QVV~LGAG--LDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~---p~~~~ 165 (317)
.+++.++..++.......+....|+-|||| .|+..+.-. ....++=||. +++++.-++...+.+... .-+..
T Consensus 29 ~vks~li~~~~~~~~~~~~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~ 106 (302)
T 2vdw_A 29 YVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFD 106 (302)
T ss_dssp HHHHHHHHHHTCTTTSSCCSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEE
T ss_pred HHHHHHHHHHHhhhhhccCCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccc
Confidence 445555554443221101123589999999 566654322 2356778887 456665555555442110 00245
Q ss_pred EEeecCCCchHHHHHHhcCCCCCCCEEEEEcCC-CCC-CHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 166 FLHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 166 ~v~vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL-~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
++..|+..+.+...|... +..+.=-++++..+ .|+ +.+++..+|+.++++..||+.+++..+
T Consensus 107 f~~~d~~~d~~~~~l~~~-~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 107 YIQETIRSDTFVSSVREV-FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp EEECCTTSSSHHHHHHTT-CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhhcccchhhhhhhcc-ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 677777655555555431 11111124444445 474 555678999999999999999888765
No 33
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=91.47 E-value=0.58 Score=39.38 Aligned_cols=97 Identities=11% Similarity=-0.008 Sum_probs=60.9
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +.+++=+|. |++++.-++ .+ . .+.+++..|+.. + + ..+.-
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~--~-~~~~~~~~d~~~--~---~-----~~~~~ 108 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HG--L-DNVEFRQQDLFD--W---T-----PDRQW 108 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GC--C-TTEEEEECCTTS--C---C-----CSSCE
T ss_pred CCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cC--C-CCeEEEeccccc--C---C-----CCCce
Confidence 358999999986544444211 346666665 444443222 21 1 367888888752 2 1 12333
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
-++++-++ .+++.++...+|+.+.+...||+.+++.
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45555556 5888888899999999988888876544
No 34
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=91.18 E-value=0.38 Score=40.39 Aligned_cols=128 Identities=13% Similarity=0.027 Sum_probs=76.0
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...|... +..++=||. |++++.-++.. .+++++..|+.. +. +..+.--
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~--~~-------~~~~~fD 104 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH--------PSVTFHHGTITD--LS-------DSPKRWA 104 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC--------TTSEEECCCGGG--GG-------GSCCCEE
T ss_pred CeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CCCeEEeCcccc--cc-------cCCCCeE
Confidence 47999999976544444221 346777776 55554433321 157777777652 21 1122334
Q ss_pred EEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhh--hhhhcC---CCCcchHHHHHHHHhCCCeee
Q 021091 192 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL--AETEFG---NKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 192 l~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~--~~~~~~---~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
++++-++ .+++.++...+|+.+.+...||+.+++..+... ...... ....+...+.++|.++||++.
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 177 (203)
T 3h2b_A 105 GLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVT 177 (203)
T ss_dssp EEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEE
T ss_pred EEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEE
Confidence 5555566 578888889999999999888888776542211 000000 111234446789999999963
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=90.99 E-value=2 Score=38.19 Aligned_cols=103 Identities=9% Similarity=0.039 Sum_probs=64.0
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+. +.++.++..|+.. +.. +..+.--
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~--~~~------~~~~~fD 138 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGV--SDNMQFIHCAAQD--VAS------HLETPVD 138 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CC--GGGEEEEESCGGG--TGG------GCSSCEE
T ss_pred CEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC--CcceEEEEcCHHH--hhh------hcCCCce
Confidence 58999999986555555322 456677776 6666665566655432 2367788887652 111 1123334
Q ss_pred EEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 192 VWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 192 l~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
++++-+++ +++. ...+|+.+.++..||+.+++..+
T Consensus 139 ~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccC--HHHHHHHHHHHcCCCeEEEEEEe
Confidence 66666664 6643 36788999998889888776643
No 36
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=90.97 E-value=1.8 Score=40.15 Aligned_cols=103 Identities=7% Similarity=0.013 Sum_probs=71.0
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...|+-+|||.=.-...+ ..| +.+++=+|.|++++.-++.+++.+. +.+++++..|+.... +. +
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---------~~-~ 256 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNLPGAIDLVNENAAEKGV--ADRMRGIAVDIYKES---------YP-E 256 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEECGGGHHHHHHHHHHTTC--TTTEEEEECCTTTSC---------CC-C
T ss_pred CCCEEEEECCcccHHHHHHHHHCC-CCeEEEEecHHHHHHHHHHHHhcCC--CCCEEEEeCccccCC---------CC-C
Confidence 4568999999976554444 244 4666777779998877777766532 346889988886422 11 1
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGEL 227 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~ 227 (317)
. -++++-.+ .+++.++...+|+.+.+...||+.+ +.|.
T Consensus 257 ~-D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 257 A-DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp C-SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred C-CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 2 34555555 5788888999999999998898876 5663
No 37
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=90.67 E-value=0.39 Score=41.74 Aligned_cols=127 Identities=12% Similarity=0.003 Sum_probs=72.5
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+... +..++=+|. |++++.-++ +++++..|+. ++...+....||
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~--~~~~~~~~~~fD---- 103 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEG-----------KFNVVKSDAI--EYLKSLPDKYLD---- 103 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHT-----------TSEEECSCHH--HHHHTSCTTCBS----
T ss_pred CCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHh-----------hcceeeccHH--HHhhhcCCCCee----
Confidence 358999999976655444221 345677776 444432111 2344444432 222222222343
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhh--h---hhhc---CCCCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL--A---ETEF---GNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~--~---~~~~---~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
++++-++ -+++.++...+|+.+.+...||+.+++..+... . .... .....+...+.++|.++||++
T Consensus 104 -~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 104 -GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp -EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred -EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 4445455 578888889999999999889888777654211 1 1111 112223344568899999996
No 38
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.77 E-value=2.7 Score=34.23 Aligned_cols=121 Identities=6% Similarity=-0.098 Sum_probs=73.8
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+ .+.+++..|+.... +..+.-
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---------~~~~~~ 108 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQ---------ISETDF 108 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSC---------CCCCCE
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCC---------CCCCce
Confidence 358999999965544444211 345666665 44554433322 14667777765321 222334
Q ss_pred EEEEEc-CCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 191 SVWAIQ-GLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 191 tl~i~E-Gv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
-++++- .++ +++.++...+++.+.++..||+.+++..+... .....-+.+.+.++||.+.
T Consensus 109 D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 109 DLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------GWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp EEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------SCCHHHHHHHHHHHTEEEE
T ss_pred eEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------CcCHHHHHHHHHHcCCEEe
Confidence 566666 454 78888889999999998889888887654210 1122224577889999974
No 39
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=89.71 E-value=1.4 Score=38.11 Aligned_cols=104 Identities=13% Similarity=0.042 Sum_probs=62.8
Q ss_pred CceEEEeCCCCCCcccccC-CCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh-cCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA-KGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~-~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~-~Gfd~~~ 189 (317)
..+|+-+|||.=.-...|. ....+.-+|++ |.+++.-++.+. ..+++++..|+........+.. ..||
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s-~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d--- 126 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFPRVIGLDVS-KSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA--- 126 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSSCEEEEESC-HHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC---
T ss_pred CCeEEEEcCCCCHHHHHHHHhCCCEEEEECC-HHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc---
Confidence 3589999999543333331 11134444444 445544333332 1268888888875333333321 1233
Q ss_pred CEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcE-EEEeC
Q 021091 190 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCL-FLGEL 227 (317)
Q Consensus 190 Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~-l~~d~ 227 (317)
++++-++ .+++.++...+|+.+.+...||+. ++.++
T Consensus 127 --~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 127 --NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp --EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred --EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5666666 478888889999999998888886 55665
No 40
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=89.40 E-value=0.74 Score=39.51 Aligned_cols=98 Identities=9% Similarity=0.136 Sum_probs=64.2
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+ ..| +..++=+|. |++++.-++.++.. + +.+++..|+....+ . +
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~-~~~~~~~d~~~~~~---------~-~ 108 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGN----L-KVKYIEADYSKYDF---------E-E 108 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSC----T-TEEEEESCTTTCCC---------C-S
T ss_pred CCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccC----C-CEEEEeCchhccCC---------C-C
Confidence 468999999976554444 233 467777776 56666545544432 2 67888888763221 1 2
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
.--++++-.+ .+++..+...+|+.+.+...||+.+++
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 2335555566 578888888899999998888887654
No 41
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=89.21 E-value=2.1 Score=37.53 Aligned_cols=132 Identities=9% Similarity=-0.015 Sum_probs=79.8
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+....+..++=||. |.+++.-++.++..+. +.+++++..|+..-. +..+.-
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---------~~~~~f 115 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGSMDDLP---------FRNEEL 115 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCC---------CCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcChhhCC---------CCCCCE
Confidence 4589999999766555553223457777776 5666655555555542 336888888875311 222344
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchhhh--------hhh-cCC-CCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWLA--------ETE-FGN-KSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~--------~~~-~~~-~~~~~~w~~~~l~~~Gw~~ 257 (317)
-++++-+++ ++. ...+++.+.++..||+.+++..+.+.. ... ... ...+...+.++|.++||.+
T Consensus 116 D~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 116 DLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp EEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred EEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 577777774 563 467888999988888887654322111 000 001 1112333467899999996
No 42
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=89.19 E-value=1.8 Score=37.54 Aligned_cols=130 Identities=9% Similarity=0.006 Sum_probs=76.1
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+. .+ .+++=+|. |.+++.-++.+...+. +.+++++..|+..-. +..+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~---------~~~~ 113 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANC--ADRVKGITGSMDNLP---------FQNE 113 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCS---------SCTT
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhCC---------CCCC
Confidence 3589999999765555552 23 25666665 5555554555555442 235888888875311 2223
Q ss_pred CCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhh--------hh-cC-CCCcchHHHHHHHHhCCCee
Q 021091 189 RPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAE--------TE-FG-NKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 189 ~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~--------~~-~~-~~~~~~~w~~~~l~~~Gw~~ 257 (317)
.--++++.+++ +++ ...+++.+.++..||+.+++..+.|... .. .. ....+.....++|.++||++
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTP 190 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEE
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeE
Confidence 34567777774 563 4668889999888888876653322110 00 00 11112333457899999996
No 43
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=88.98 E-value=1.4 Score=38.63 Aligned_cols=96 Identities=9% Similarity=0.073 Sum_probs=63.0
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+. ++.++..|+....+ ...|
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~~~~-----~~~f----- 111 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP--------DAVLHHGDMRDFSL-----GRRF----- 111 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTCCC-----SCCE-----
T ss_pred CCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC--------CCEEEECChHHCCc-----cCCc-----
Confidence 368999999987665555322 345666776 566654443321 57788888763221 1223
Q ss_pred EEEEEcC-C-CCCC-HHHHHHHHHHHHhccCCCcEEEEe
Q 021091 191 SVWAIQG-L-PVMT-LASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 191 tl~i~EG-v-~YL~-~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
-++++-+ + .|+. +++...+|+.+.++..||+.++++
T Consensus 112 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 112 SAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3555554 6 4774 578889999999998899998886
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=88.45 E-value=0.97 Score=41.07 Aligned_cols=132 Identities=5% Similarity=-0.091 Sum_probs=76.6
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+....+..++=||. |++++.-++.++..+. +.++.++..|+.... +..+.-
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~---------~~~~~f 186 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDTP---------FDKGAV 186 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCC---------CCTTCE
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcCC---------CCCCCE
Confidence 4589999999865554442111356677776 5666655555665542 236888888876321 222333
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCc--hhh--------hhhh--cCCCCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP--AWL--------AETE--FGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~--~~~--------~~~~--~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
-++++-++ .+++ ...+|+.+.++..||+.+++-.+ ... .... ......+...+.++|.++||++
T Consensus 187 D~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~ 263 (312)
T 3vc1_A 187 TASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVP 263 (312)
T ss_dssp EEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEE
T ss_pred eEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEE
Confidence 45555555 4675 77788899998888887654321 100 0000 0111223333568899999995
No 45
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=88.08 E-value=2.4 Score=39.47 Aligned_cols=123 Identities=8% Similarity=0.028 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecC
Q 021091 92 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 171 (317)
Q Consensus 92 ~~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdl 171 (317)
..|+..+-+.+.+.+...+ ...|+-+|||.=.-...+...+...++=||..++++.-++.++..+. ..+++++..|+
T Consensus 46 ~~r~~~~~~~i~~~~~~~~-~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~--~~~i~~~~~d~ 122 (340)
T 2fyt_A 46 KIRTESYRDFIYQNPHIFK-DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKL--EDTITLIKGKI 122 (340)
T ss_dssp HHHHHHHHHHHHHCGGGTT-TCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTC--TTTEEEEESCT
T ss_pred HHHHHHHHHHHHhhhhhcC-CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCC--CCcEEEEEeeH
Confidence 3466666566665543223 35899999997554444421122355555554466655555665542 23678888877
Q ss_pred CCchHHHHHHhcCCCCCCCEEEEEcCCCC--CCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 172 ESSNIQQALRAKGFNGNRPSVWAIQGLPV--MTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 172 d~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y--L~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.. + .+..+.--+++++.+.| ..+.....++..+.++..||+.++.+
T Consensus 123 ~~--~-------~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 123 EE--V-------HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp TT--S-------CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred HH--h-------cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 52 1 12224456888888743 34567788999998888888888744
No 46
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=87.80 E-value=2.3 Score=36.09 Aligned_cols=96 Identities=11% Similarity=0.017 Sum_probs=54.7
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...+... +..++=+|. |++++.-++.+. .+++++..|+.. + .. .+.--
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~--~---~~-----~~~fD 105 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLK-------DGITYIHSRFED--A---QL-----PRRYD 105 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGG--C---CC-----SSCEE
T ss_pred CcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHH--c---Cc-----CCccc
Confidence 46999999976544444221 123444554 344443333322 156777776642 2 11 12234
Q ss_pred EEEEcCCC-CCCHHHHHHHHHHHH-hccCCCcEEEEeCc
Q 021091 192 VWAIQGLP-VMTLASFEDVLLLVG-SLAMNKCLFLGELP 228 (317)
Q Consensus 192 l~i~EGv~-YL~~~~v~~Ll~~ia-~ls~~gS~l~~d~~ 228 (317)
++++-+++ +++. ...+|+.+. ++..||+.+++..+
T Consensus 106 ~v~~~~~l~~~~~--~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 106 NIVLTHVLEHIDD--PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EEEEESCGGGCSS--HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEEhhHHHhhcC--HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 66666664 6643 367889999 88888888776644
No 47
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=87.58 E-value=1.8 Score=40.65 Aligned_cols=96 Identities=7% Similarity=0.018 Sum_probs=66.4
Q ss_pred CCCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCC
Q 021091 110 DGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNG 187 (317)
Q Consensus 110 ~g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~ 187 (317)
.+...||-+|||-=.-...+ ..| +.+++-+|+|++++.-+ . ..+++++..|+.. .+ |
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~-------~--~~~v~~~~~D~~~-~~----------p 258 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDLPHVISEAP-------Q--FPGVTHVGGDMFK-EV----------P 258 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC-------C--CTTEEEEECCTTT-CC----------C
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecCHHHHHhhh-------h--cCCeEEEeCCcCC-CC----------C
Confidence 34579999999977655555 344 46778888898865311 1 1378899998763 22 1
Q ss_pred CCCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 021091 188 NRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLF-LGEL 227 (317)
Q Consensus 188 ~~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~ 227 (317)
+. -++++-.++ +++.++...+|+.+.+...||+.+ +.|.
T Consensus 259 ~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 259 SG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp CC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 11 355566664 688899999999999988888865 5564
No 48
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=87.47 E-value=0.91 Score=41.56 Aligned_cols=131 Identities=12% Similarity=0.088 Sum_probs=81.8
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
..|+-+|||.=.-...+ ..| +.+++=+|.|++++.-++.+.+.+. ..+++++..|+.. .+ . .+||
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~----~-~~~D---- 235 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDREGSLGVARDNLSSLLA--GERVSLVGGDMLQ-EV----P-SNGD---- 235 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEECTTCTHHHHHHTHHHHH--TTSEEEEESCTTT-CC----C-SSCS----
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCcHHHHHHHHHHHhhcCC--CCcEEEecCCCCC-CC----C-CCCC----
Confidence 78999999987655555 234 4567777778888766665554321 2368888888764 21 1 2354
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEE-EeCc--h----hhh---hhh----cCCCCcchHHHHHHHHhCCC
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL-GELP--A----WLA---ETE----FGNKSTTEKWMDKLFMSNGF 255 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~-~d~~--~----~~~---~~~----~~~~~~~~~w~~~~l~~~Gw 255 (317)
++++-.+ .+++.++...+|+.+.+...||+.++ .|.. . +.. +.. .+.+..+.....++|.+.||
T Consensus 236 -~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 314 (334)
T 2ip2_A 236 -IYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGF 314 (334)
T ss_dssp -EEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTE
T ss_pred -EEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCC
Confidence 4445555 47888888999999999888888754 5542 1 100 000 01122233334588999999
Q ss_pred ee
Q 021091 256 GV 257 (317)
Q Consensus 256 ~~ 257 (317)
+.
T Consensus 315 ~~ 316 (334)
T 2ip2_A 315 AV 316 (334)
T ss_dssp EE
T ss_pred ce
Confidence 85
No 49
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=87.37 E-value=1.5 Score=38.35 Aligned_cols=103 Identities=11% Similarity=-0.003 Sum_probs=59.7
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
..|+.+|||.=.-+-.+. .|..++.+|++ |++++.-++.....+ .+.+++..|.. ++...+....||
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~-~~~~~~a~~~~~~~~----~~~~~~~~~a~--~~~~~~~~~~FD---- 130 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECN-DGVFQRLRDWAPRQT----HKVIPLKGLWE--DVAPTLPDGHFD---- 130 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEEECC-HHHHHHHHHHGGGCS----SEEEEEESCHH--HHGGGSCTTCEE----
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEEeCC-HHHHHHHHHHHhhCC----CceEEEeehHH--hhcccccccCCc----
Confidence 579999999864443442 34456777887 778776555554431 23444443321 222222223343
Q ss_pred EEEEEcCC-C-C--CCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 191 SVWAIQGL-P-V--MTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 191 tl~i~EGv-~-Y--L~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
.++...+ . + ....+...+++.+.++..||..++|..
T Consensus 131 -~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 131 -GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp -EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred -eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 2333433 1 2 344566788888999889999988764
No 50
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=87.11 E-value=2.4 Score=39.27 Aligned_cols=153 Identities=8% Similarity=0.018 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCccccc-CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEe
Q 021091 91 YCLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLH 168 (317)
Q Consensus 91 ~~~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL-~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~ 168 (317)
.-.|--.+|++-.......++...|+-||||+=+.+.-+ .+.+..+|+=+|. +..+++-++.+...+. +..+..
T Consensus 112 TreRLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~----~~~~~v 187 (281)
T 3lcv_B 112 TRERLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV----PHRTNV 187 (281)
T ss_dssp HHHHGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC----CEEEEE
T ss_pred HHHHhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CceEEE
Confidence 344555788876665554345679999999999987766 3434567777776 4566766677766541 356666
Q ss_pred ecCCCchHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHH
Q 021091 169 VPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMD 247 (317)
Q Consensus 169 vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~ 247 (317)
.|+..... +..--++++-=+ .+|+.++-...++.+..+-++|-.+.|+.-.-..+. .++...-..|.+
T Consensus 188 ~D~~~~~p----------~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs-~gm~~~Y~~~~e 256 (281)
T 3lcv_B 188 ADLLEDRL----------DEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRS-KGMFQNYSQSFE 256 (281)
T ss_dssp CCTTTSCC----------CSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC--------CHHHHHHHHHH
T ss_pred eeecccCC----------CCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCC-cchhhHHHHHHH
Confidence 66653221 111124444444 478777666777777777666666777762111000 011111245567
Q ss_pred HHHHhCCCeee
Q 021091 248 KLFMSNGFGVG 258 (317)
Q Consensus 248 ~~l~~~Gw~~~ 258 (317)
+++.+.||.++
T Consensus 257 ~~~~~~g~~~~ 267 (281)
T 3lcv_B 257 SQARERSCRIQ 267 (281)
T ss_dssp HHHHHHTCCEE
T ss_pred HHHHhcCCcee
Confidence 88899999875
No 51
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.05 E-value=1.5 Score=38.06 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=75.6
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+....+..++=+|. |++++.-++..+..+. +.++.++..|+..... ...|
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~~-----~~~f----- 104 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDAAGYVA-----NEKC----- 104 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCCTTCCC-----SSCE-----
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECChHhCCc-----CCCC-----
Confidence 3589999999865444442111345677776 5666655555555432 2368888888763110 2223
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhh-----hh---cC---CCCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAE-----TE---FG---NKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~-----~~---~~---~~~~~~~w~~~~l~~~Gw~~ 257 (317)
-++++-+++ +++ +...+|+.+.+...||+.+++..+.+... .. .. ....+..-..++|.++||++
T Consensus 105 D~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 181 (256)
T 1nkv_A 105 DVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDV 181 (256)
T ss_dssp EEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCC
T ss_pred CEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCee
Confidence 466666664 454 35678888999888888877643222110 00 00 01112223457899999985
No 52
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=86.63 E-value=2.7 Score=35.41 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=75.0
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+. .++...++=+|. |++++.-++.+...+. .++.++..|+..-. +...
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~---------~~~~ 105 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL---KNVEVLKSEENKIP---------LPDN 105 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECBTTBCS---------SCSS
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEecccccCC---------CCCC
Confidence 3589999999866555442 222456777776 5666655555555432 26788888876321 2222
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCchhhhhhhcC-CCCcchHHHHHHHHhCCCee
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFG-NKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~~~~~~~~~~~-~~~~~~~w~~~~l~~~Gw~~ 257 (317)
.--++++-++ .+++ +...+++.+.++..||+.+++ +........... ....+...+.++|.++||+.
T Consensus 106 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 106 TVDFIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp CEEEEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred CeeEEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEE
Confidence 3345555555 4563 346788888888878887665 322110000000 01112333568899999995
No 53
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=86.56 E-value=1.2 Score=42.77 Aligned_cols=122 Identities=14% Similarity=0.118 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecC
Q 021091 92 CLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 171 (317)
Q Consensus 92 ~~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdl 171 (317)
.+||..+.+.|.+......| ..|+-+|||.=-.+.-....+..+||=||..++++.-+++++..+.. ++.+++..++
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~~~-k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~--~~i~~i~~~~ 141 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAALRG-KTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLE--DRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHHHHHTTHHHHTT-CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCT--TTEEEEESCT
T ss_pred HHHHHHHHHHHHhCHHhcCC-CEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCC--ceEEEEeeee
Confidence 56888888777653322244 47999999976544332222235678788767776666677766532 4688888887
Q ss_pred CCchHHHHHHhcCCCCCCCEEEEEcCC-CC-CCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 172 ESSNIQQALRAKGFNGNRPSVWAIQGL-PV-MTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 172 d~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~Y-L~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
..-++ |.+--++|+|-+ .+ +.+..+..++.....+..||..++.+
T Consensus 142 ~~~~l----------pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 142 ETVEL----------PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTCCC----------SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eeecC----------CccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 63211 345568999988 44 45567888999998888888888765
No 54
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=86.11 E-value=2.7 Score=38.76 Aligned_cols=132 Identities=11% Similarity=0.001 Sum_probs=84.9
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||.=.-...+ ..| +++++.+|.|++++.-++.+...+. +.+++++..|+.. .+. .+|
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~-----~~~---- 250 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAP-HVSATVLEMAGTVDTARSYLKDEGL--SDRVDVVEGDFFE-PLP-----RKA---- 250 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECTTHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCS-----SCE----
T ss_pred CcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecCHHHHHHHHHHHHhcCC--CCceEEEeCCCCC-CCC-----CCc----
Confidence 468999999987655555 233 5788889988888776666665432 2378888888753 211 123
Q ss_pred CEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEE-EeCc--hhh-----h---hhh----cCCCCcchHHHHHHHHhC
Q 021091 190 PSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFL-GELP--AWL-----A---ETE----FGNKSTTEKWMDKLFMSN 253 (317)
Q Consensus 190 Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~-~d~~--~~~-----~---~~~----~~~~~~~~~w~~~~l~~~ 253 (317)
-++++-.++ +++.++...+|+.+.+...||+.++ .|.. ... . +.. .+.+..+.....++|.++
T Consensus 251 -D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (360)
T 1tw3_A 251 -DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASA 329 (360)
T ss_dssp -EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHT
T ss_pred -cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHC
Confidence 356666664 7888888899999999888888654 5643 110 0 000 012222333346889999
Q ss_pred CCee
Q 021091 254 GFGV 257 (317)
Q Consensus 254 Gw~~ 257 (317)
||++
T Consensus 330 Gf~~ 333 (360)
T 1tw3_A 330 GLVV 333 (360)
T ss_dssp TEEE
T ss_pred CCeE
Confidence 9986
No 55
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=86.09 E-value=7.4 Score=41.59 Aligned_cols=108 Identities=14% Similarity=-0.022 Sum_probs=68.6
Q ss_pred CceEEEeCCCCCCcccccCC--CCCcEEEEech-hhhHHHHHHHHhhcCC---CCCCcceEEeecCCCchHHHHHHhcCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNW--PTSTIIFDISP-ERIFKISAEKLEGVGA---KIPRSCLFLHVPLESSNIQQALRAKGF 185 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~--~~~~~~fEVD~-P~v~~~K~~~L~~~~~---~~p~~~~~v~vdld~~dw~~~L~~~Gf 185 (317)
...|+-+|||-=.-...|.. +....++=||. |++++.-++.+..... ....+.+++..|+..-.+ ...+|
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~----~d~sF 797 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS----RLHDV 797 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT----TSCSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc----ccCCe
Confidence 35899999998766655532 22356777776 5566554454443211 011267888888764221 22345
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 186 NGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 186 d~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
| .++..+.+.+++......+++.+.+...|| .+++..+
T Consensus 798 D----lVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 798 D----IGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp C----EEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred e----EEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 5 555555546899988889999999999999 7666544
No 56
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=85.99 E-value=1.9 Score=36.85 Aligned_cols=128 Identities=12% Similarity=0.021 Sum_probs=72.2
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.. ...+++++..|+..-. +....-
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~---------~~~~~f 117 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLP---------FENEQF 117 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCS---------SCTTCE
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCC---------CCCCCc
Confidence 358999999987655555322 456667776 44444322221 1136788888876321 112233
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchh--hh--hhh---c----CCCCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAW--LA--ETE---F----GNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~--~~--~~~---~----~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
-++++-+++ +++ +...+++.+.+...||+.+++..+.. .. ... . .....+...+.++|.++||++
T Consensus 118 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 118 EAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp EEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred cEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 455555664 553 34578888888888888776543211 00 000 0 012233444678999999996
No 57
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=85.72 E-value=1.6 Score=40.95 Aligned_cols=95 Identities=11% Similarity=0.068 Sum_probs=66.4
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...||-+|||-=.-...+ ..| +.+++-+|+|++++.-+ + . .+++++..|+.. .+ |+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~----~----~-~~v~~~~~d~~~-~~----------p~ 261 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDLPHVIQDAP----A----F-SGVEHLGGDMFD-GV----------PK 261 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC----C----C-TTEEEEECCTTT-CC----------CC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEehHHHHHhhh----h----c-CCCEEEecCCCC-CC----------CC
Confidence 4579999999987665555 344 57788888898875311 1 1 368888888763 22 11
Q ss_pred CCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEE-EEeC
Q 021091 189 RPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLF-LGEL 227 (317)
Q Consensus 189 ~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~ 227 (317)
. -++++-.++ +++.++...+|+.+.+...||+.+ +.|.
T Consensus 262 ~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 262 G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1 356666664 688899999999999988888865 5564
No 58
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=85.71 E-value=2.6 Score=36.38 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=77.9
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+....+.+++=||. |++++.-++.+... .+++++..|+.... +..+.-
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~---------~~~~~f 121 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTKE---------FPENNF 121 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTCC---------CCTTCE
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccCC---------CCCCcE
Confidence 3589999999655444442111356777776 44554433333221 36788888876321 222333
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCch------hhhhh-----hcCCCCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA------WLAET-----EFGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~------~~~~~-----~~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
-++++-++ .+++.++...+|+.+.++..||+.+++..+. +.... ..+....+...+.++|.++||++
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKN 200 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEE
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeE
Confidence 45666556 5788889999999999988888876654211 10000 01222233444568899999985
No 59
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=85.29 E-value=3.1 Score=36.33 Aligned_cols=110 Identities=9% Similarity=-0.050 Sum_probs=63.2
Q ss_pred CceEEEeCCCCC--CcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMD--TRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLD--TRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+.+|||.= +..+--..|.+.+++-+|. |+.++.-++.++..+. .++++++..|.. ++...+...|+..+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~--~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAM--LALDNLLQGQESEG 146 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHSTTCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHHhccCCCC
Confidence 458999999754 3332222343455666665 5566655556665542 235666666543 34455654443222
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
.--++++-+- .......++.+.++..||+.+++|-..
T Consensus 147 ~fD~I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 147 SYDFGFVDAD----KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp CEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CcCEEEECCc----hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 2234444332 344567888888888899999998543
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=85.26 E-value=8 Score=32.40 Aligned_cols=118 Identities=13% Similarity=0.109 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccC-CCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPL 171 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~-~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdl 171 (317)
.+...+-+.+.+.+. + ...|+-+|||.=.-...+. ....+.-+|++ |++++.-++.+...+ .+.+++..|+
T Consensus 23 ~~~~~~~~~l~~~~~--~-~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s-~~~~~~a~~~~~~~~----~~~~~~~~d~ 94 (227)
T 1ve3_A 23 SRIETLEPLLMKYMK--K-RGKVLDLACGVGGFSFLLEDYGFEVVGVDIS-EDMIRKAREYAKSRE----SNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHHHHHHSCC--S-CCEEEEETCTTSHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHTT----CCCEEEECCT
T ss_pred HHHHHHHHHHHHhcC--C-CCeEEEEeccCCHHHHHHHHcCCEEEEEECC-HHHHHHHHHHHHhcC----CCceEEECch
Confidence 344444455555543 2 4589999999765444442 11234444554 666665555555442 2678888887
Q ss_pred CCchHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 172 ESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 172 d~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
.... +....--++++-.+ .+...++...+++.+.++..||+.+++..
T Consensus 95 ~~~~---------~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 95 RKLS---------FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp TSCC---------SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCC---------CCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 6311 11223345555566 36677788899999999888888876554
No 61
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=85.11 E-value=3.2 Score=34.90 Aligned_cols=112 Identities=5% Similarity=-0.023 Sum_probs=69.0
Q ss_pred HHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHH
Q 021091 99 DDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQ 177 (317)
Q Consensus 99 Dd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~ 177 (317)
...+...+.. .....|+-+|||.=.-...+... +..++=+|. |++++.-++.+... .+++++..|+....
T Consensus 40 ~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-- 110 (216)
T 3ofk_A 40 TQLLRLSLSS-GAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-- 110 (216)
T ss_dssp HHHHHHHTTT-SSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC--
T ss_pred HHHHHHHccc-CCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC--
Confidence 3344444432 23468999999976554444321 345666665 55555544544432 26788888876321
Q ss_pred HHHHhcCCCCCCCEEEEEcCC-CCCC-HHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 178 QALRAKGFNGNRPSVWAIQGL-PVMT-LASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 178 ~~L~~~Gfd~~~Ptl~i~EGv-~YL~-~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
....| -++++-++ .|++ ++....+|+.+.++..||+.+++..
T Consensus 111 ---~~~~f-----D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 111 ---TAELF-----DLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ---CSCCE-----EEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---CCCCc-----cEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 11223 35666666 4776 5788899999999988988887754
No 62
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=85.10 E-value=2.1 Score=36.88 Aligned_cols=149 Identities=12% Similarity=0.081 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPL 171 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdl 171 (317)
.+..++..++...-. .+...|+-+|||.=.-...+.......++=+|. |.+++.-++.+... .+.+++..|+
T Consensus 77 ~~~~~~~~~l~~l~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~ 149 (254)
T 1xtp_A 77 VDIEGSRNFIASLPG--HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASM 149 (254)
T ss_dssp HHHHHHHHHHHTSTT--CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCG
T ss_pred HHHHHHHHHHHhhcc--cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccH
Confidence 344455555554321 234689999999765444442111234555664 55555544444332 2567777766
Q ss_pred CCchHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhh-hh----cCCCCcchHH
Q 021091 172 ESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAE-TE----FGNKSTTEKW 245 (317)
Q Consensus 172 d~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~-~~----~~~~~~~~~w 245 (317)
.... +..+.--++++-.+ .|++.++...+|+.+.+...||+.+++..+..... .. ......+...
T Consensus 150 ~~~~---------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T 1xtp_A 150 ETAT---------LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIH 220 (254)
T ss_dssp GGCC---------CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHH
T ss_pred HHCC---------CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHH
Confidence 4211 22223346666666 48888888999999999888888776543210000 00 0000112333
Q ss_pred HHHHHHhCCCee
Q 021091 246 MDKLFMSNGFGV 257 (317)
Q Consensus 246 ~~~~l~~~Gw~~ 257 (317)
+.++|.++||++
T Consensus 221 ~~~~l~~aGf~~ 232 (254)
T 1xtp_A 221 YKRLFNESGVRV 232 (254)
T ss_dssp HHHHHHHHTCCE
T ss_pred HHHHHHHCCCEE
Confidence 568899999996
No 63
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=84.85 E-value=3.4 Score=33.93 Aligned_cols=99 Identities=7% Similarity=-0.113 Sum_probs=63.2
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |.+++.-++.+...+. .+.+++..|+.... + .+.-
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~---------~-~~~~ 98 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL---DNLHTRVVDLNNLT---------F-DRQY 98 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECCGGGCC---------C-CCCE
T ss_pred CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC---CCcEEEEcchhhCC---------C-CCCc
Confidence 358999999965544444221 346666676 5555554455544432 25777777765211 2 2333
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEE
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL 224 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~ 224 (317)
-++++-++ .+++.++...+++.+.++..||+.++
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 56777777 47888888999999999888888754
No 64
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=84.84 E-value=3.3 Score=38.20 Aligned_cols=122 Identities=11% Similarity=0.095 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 172 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld 172 (317)
.|+..+.+.+.+.+...++ ..|+-+|||.=.-...+...+..+++=||..++++.-++.++..+. +.+.+++..|+.
T Consensus 21 ~r~~~y~~ai~~~~~~~~~-~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~--~~~i~~~~~d~~ 97 (328)
T 1g6q_1 21 VRTLSYRNAIIQNKDLFKD-KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGF--SDKITLLRGKLE 97 (328)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTC--TTTEEEEESCTT
T ss_pred HHHHHHHHHHHhhHhhcCC-CEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCC--CCCEEEEECchh
Confidence 4555555555444332233 5899999997654444421112345555544466655555665542 236788888776
Q ss_pred CchHHHHHHhcCCCCCCCEEEEEcCCCC-C-CHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 173 SSNIQQALRAKGFNGNRPSVWAIQGLPV-M-TLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 173 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y-L-~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.-. +....--+++++.+.| + .++....++..+.++..||+.++.+
T Consensus 98 ~~~---------~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 98 DVH---------LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp TSC---------CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred hcc---------CCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 311 1223446888887743 3 4556778888888888888888754
No 65
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=84.84 E-value=1.3 Score=39.91 Aligned_cols=107 Identities=11% Similarity=0.001 Sum_probs=65.3
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||-=.-...|. .+.+.+++=+|. |.+++.-++.+..... ...+++++..|+..-.+.+ ..++..+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d~~~~~~~~---~~~~~~~ 112 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD-TYKNVSFKISSSDDFKFLG---ADSVDKQ 112 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCCGGGC---TTTTTSS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC-CCCceEEEEcCHHhCCccc---cccccCC
Confidence 4689999999776555554 123577777787 5666655555555411 1237889999887422211 0011113
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
.--++++-++ .++ +...+++.+.++..||+.+++
T Consensus 113 ~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 3345555555 466 567788888888888887654
No 66
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=84.34 E-value=2.9 Score=38.68 Aligned_cols=133 Identities=8% Similarity=-0.045 Sum_probs=84.4
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-++.+...+. +.+++++..|+.. .+. .+||
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~-----~~~D-- 250 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVELAGPAERARRRFADAGL--ADRVTVAEGDFFK-PLP-----VTAD-- 250 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCS-----CCEE--
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeCHHHHHHHHHHHHhcCC--CCceEEEeCCCCC-cCC-----CCCC--
Confidence 3468999999987655554 233 5778888888888876666665532 2378888888753 221 1233
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEE-EEeC--c--hhh----h---hhh----cCCCCcchHHHHHHHH
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLF-LGEL--P--AWL----A---ETE----FGNKSTTEKWMDKLFM 251 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l-~~d~--~--~~~----~---~~~----~~~~~~~~~w~~~~l~ 251 (317)
++++-.+ .+++.+....+|+.+.+...||+.+ +.|. . ... . +.. .+.+..+.....++|.
T Consensus 251 ---~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 327 (374)
T 1qzz_A 251 ---VVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAG 327 (374)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred ---EEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHH
Confidence 5666666 4788888889999999988888865 4565 2 110 0 000 0112223333468899
Q ss_pred hCCCee
Q 021091 252 SNGFGV 257 (317)
Q Consensus 252 ~~Gw~~ 257 (317)
++||+.
T Consensus 328 ~aGf~~ 333 (374)
T 1qzz_A 328 SAGLAL 333 (374)
T ss_dssp TTTEEE
T ss_pred HCCCce
Confidence 999986
No 67
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=84.33 E-value=11 Score=31.04 Aligned_cols=99 Identities=9% Similarity=-0.017 Sum_probs=62.3
Q ss_pred eEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCEE
Q 021091 114 QVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPSV 192 (317)
Q Consensus 114 QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Ptl 192 (317)
.|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+ . +..++..|+.... +....|| +
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~----~~~~~fD-----~ 97 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKG---V-KITTVQSNLADFD----IVADAWE-----G 97 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHT---C-CEEEECCBTTTBS----CCTTTCS-----E
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcC---C-ceEEEEcChhhcC----CCcCCcc-----E
Confidence 8999999975444444322 456777776 556655455555442 1 5677777765321 1111233 4
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 193 WAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 193 ~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
+++ ...+++.++...+++.+.++..||+.+++..
T Consensus 98 v~~-~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 98 IVS-IFCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp EEE-ECCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred EEE-EhhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 444 2346678889999999999998998877764
No 68
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=84.06 E-value=11 Score=30.16 Aligned_cols=118 Identities=14% Similarity=0.190 Sum_probs=68.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+.. .+..++=+|. |++++.-++.+...+. .+++++..|+. +.+....|
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~-----~~~~~~~~----- 101 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAE-----DVLDKLEF----- 101 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHH-----HHGGGCCC-----
T ss_pred CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCcc-----ccccCCCC-----
Confidence 35899999998665555533 3456666665 5565555555555432 24666655543 23333233
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeeeec
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVGMV 260 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~~~ 260 (317)
-++++-++ .....+++.+.++ ||+.+++..+.... .....+.|.++||.++..
T Consensus 102 D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~~~----------~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 102 NKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVLEN----------AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp SEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCHHH----------HHHHHHHHHHTTCEEEEE
T ss_pred cEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccccc----------HHHHHHHHHHcCCeEEEE
Confidence 35555444 4567788888887 66676665432110 112456789999987643
No 69
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=83.94 E-value=11 Score=31.71 Aligned_cols=106 Identities=8% Similarity=0.025 Sum_probs=65.3
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhc---CC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAK---GF 185 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~---Gf 185 (317)
...|+-+|||.=.-...+ ..|.+.+++=+|. |+.++.-++.+...+. +.+++++..|+. +....+... .|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~~~~~~~~~f 134 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLAL--DSLQQIENEKYEPF 134 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHHHHHTTCCCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHHhcCCCCc
Confidence 358999999865433333 2343567777776 6666665666665542 235777777654 333444432 25
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchh
Q 021091 186 NGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAW 230 (317)
Q Consensus 186 d~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~ 230 (317)
| ++++-+. ......+++.+.++..||+.+++|-+.+
T Consensus 135 D-----~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 135 D-----FIFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp S-----EEEECSC----GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred C-----EEEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 4 4444333 3445678888888888999999886543
No 70
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=83.74 E-value=6.7 Score=32.35 Aligned_cols=104 Identities=12% Similarity=0.097 Sum_probs=61.8
Q ss_pred ceEEEeCCCCCCccccc-CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL-~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
..|+-||||.=.-...+ ..+ ..+++=||. |++++.-++.++..+. .+++++..|+. ++...+....||
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~--~~~~~~~~~~fD---- 115 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGL---SGATLRRGAVA--AVVAAGTTSPVD---- 115 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEESCHH--HHHHHCCSSCCS----
T ss_pred CEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEEccHH--HHHhhccCCCcc----
Confidence 58999999976544433 222 234555554 4555544444555432 25677776653 333222122233
Q ss_pred EEEEEcCCCCC-CHHHHHHHHHHHHh--ccCCCcEEEEeCc
Q 021091 191 SVWAIQGLPVM-TLASFEDVLLLVGS--LAMNKCLFLGELP 228 (317)
Q Consensus 191 tl~i~EGv~YL-~~~~v~~Ll~~ia~--ls~~gS~l~~d~~ 228 (317)
++++-.. |. ..+....+++.+.+ +..||+.++++..
T Consensus 116 -~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 116 -LVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp -EEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred -EEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 5555444 53 45788899999998 7789999888764
No 71
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=82.92 E-value=4.2 Score=37.83 Aligned_cols=121 Identities=7% Similarity=0.051 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 172 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld 172 (317)
.|+..+.+.+.+.+...++ ..|+-+|||-=.-...+...+..+++=||..++++.-++.++..+. +.+++++..|+.
T Consensus 33 ~r~~~y~~~i~~~l~~~~~-~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l--~~~v~~~~~d~~ 109 (348)
T 2y1w_A 33 VRTGTYQRAILQNHTDFKD-KIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL--TDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHHHHTGGGTTT-CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC--TTTEEEEESCTT
T ss_pred HHHHHHHHHHHhccccCCc-CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcchh
Confidence 4555555555555443233 5899999997655544421122355555554566555555655442 236788888876
Q ss_pred CchHHHHHHhcCCCCCCCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 173 SSNIQQALRAKGFNGNRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 173 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.-. + ++.--+++++++. .+..+.....+..+.++..||+.++..
T Consensus 110 ~~~---------~-~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 110 EVS---------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TCC---------C-SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hCC---------C-CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 311 1 1344688899884 455555566666777877888888755
No 72
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=82.86 E-value=5.2 Score=34.52 Aligned_cols=99 Identities=16% Similarity=0.073 Sum_probs=60.1
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+.......++=+|. |++++.-++.+. ..++.++..|+..-. +..+.-
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~---------~~~~~f 109 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIA---------IEPDAY 109 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCC---------CCTTCE
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCC---------CCCCCe
Confidence 4589999999865444442111126677776 556655444433 136788888775211 212233
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 191 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 191 tl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
-++++-+++ ++ ++...+|+.+.+...||+.+++..
T Consensus 110 D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 110 NVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 456666664 66 345788899999888988888764
No 73
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=82.77 E-value=8.1 Score=32.67 Aligned_cols=102 Identities=9% Similarity=0.052 Sum_probs=66.2
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+ .+.+++..|+.... +. +.-
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---------~~-~~f 102 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNLN---------IN-RKF 102 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGCC---------CS-CCE
T ss_pred CCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccCC---------cc-CCc
Confidence 358999999987655555322 356777776 566655455555432 14667766654211 11 233
Q ss_pred EEEEEcC-C-CCC-CHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 191 SVWAIQG-L-PVM-TLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 191 tl~i~EG-v-~YL-~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
-++++-+ + .|+ ++++...+|+.+.++..||+.++++.+
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 4666665 6 477 557889999999999889999888754
No 74
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=82.66 E-value=1.8 Score=37.60 Aligned_cols=141 Identities=11% Similarity=-0.014 Sum_probs=75.0
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCC---------------CC-----------Ccc-
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAK---------------IP-----------RSC- 164 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~---------------~p-----------~~~- 164 (317)
..|+-+|||.=.-...+.......++=+|. |.+++.-++.+...+.. .+ .++
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~ 137 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIK 137 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEE
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhhe
Confidence 579999999844333332211136777776 45555444444432100 00 015
Q ss_pred eEEeecCCCchHHHHHHhcCCCCCCCEEEEEcCCC-CCC--HHHHHHHHHHHHhccCCCcEEEEeCc-hh--hhhhh--c
Q 021091 165 LFLHVPLESSNIQQALRAKGFNGNRPSVWAIQGLP-VMT--LASFEDVLLLVGSLAMNKCLFLGELP-AW--LAETE--F 236 (317)
Q Consensus 165 ~~v~vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv~-YL~--~~~v~~Ll~~ia~ls~~gS~l~~d~~-~~--~~~~~--~ 236 (317)
+++..|+....... . .....--++++-.++ ++. .++...+|+.+.++..||+.+++... .. ..... .
T Consensus 138 ~~~~~d~~~~~~~~---~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 138 QVLKCDVTQSQPLG---G--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp EEEECCTTSSSTTT---T--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred eEEEeeeccCCCCC---c--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 67777776422211 1 111233466666663 443 35788899999998888888765431 10 00000 0
Q ss_pred CCCCcchHHHHHHHHhCCCeee
Q 021091 237 GNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 237 ~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
.....+...+.++|.++||++.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEE
T ss_pred cccccCHHHHHHHHHHCCCEEE
Confidence 1122234456688999999963
No 75
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=82.63 E-value=5.4 Score=33.87 Aligned_cols=108 Identities=10% Similarity=-0.048 Sum_probs=61.0
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+.+|||.=.-...+ ..+.+.+++=+|. |+.++.-++.++..+. ..+++++..|+. +....+...| ...
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~--~~~~~~~~~~-~~~ 144 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPAL--ETLDELLAAG-EAG 144 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHHHHHTT-CTT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHH--HHHHHHHhcC-CCC
Confidence 358999999854333333 2333456666665 5566655566665542 236777776653 3344454322 111
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
.--++++-+. ......+++.+.++..||+.++++-.
T Consensus 145 ~~D~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 145 TFDVAVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp CEEEEEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CccEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 2234444332 23345677778887788999888754
No 76
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=82.62 E-value=5 Score=34.49 Aligned_cols=134 Identities=13% Similarity=0.012 Sum_probs=76.1
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...|.......++=+|. |++++.-++.+...+ ..+..++..|+.. +. +..+.-
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~--~~-------~~~~~f 147 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQD--FT-------PEPDSY 147 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGG--CC-------CCSSCE
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhh--cC-------CCCCCE
Confidence 4689999999766555543222345666665 555555444444432 1245666666542 11 112233
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCchhhhhhhcCC---CCcchHHHHHHHHhCCCee
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGN---KSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~~~~~~~~~~~~---~~~~~~w~~~~l~~~Gw~~ 257 (317)
-++++-.+ .|++.+....+|+.+.++..||+.+++ +............ ...+...+.++|.++||++
T Consensus 148 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 219 (241)
T 2ex4_A 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSL 219 (241)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCE
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeE
Confidence 45666666 588888888999999998888887665 4211000000000 0012333568899999986
No 77
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=81.51 E-value=3.6 Score=38.31 Aligned_cols=122 Identities=8% Similarity=0.036 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 172 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld 172 (317)
.|+..+.+.+.+.....++ ..|+-+|||-=.-...+...+..+++=||..++++.-++.++..+. +.+++++..|+.
T Consensus 49 ~r~~~~~~~i~~~~~~~~~-~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~--~~~v~~~~~d~~ 125 (349)
T 3q7e_A 49 VRTLTYRNSMFHNRHLFKD-KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKL--DHVVTIIKGKVE 125 (349)
T ss_dssp HHHHHHHHHHHTCHHHHTT-CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTC--TTTEEEEESCTT
T ss_pred HHHHHHHHHHHhccccCCC-CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCC--CCcEEEEECcHH
Confidence 4555555555432211133 5899999998655444421122355555554577666666665542 235888888876
Q ss_pred CchHHHHHHhcCCCCCCCEEEEEcCCC-C-CCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 173 SSNIQQALRAKGFNGNRPSVWAIQGLP-V-MTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 173 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~-Y-L~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.-. +....--+++++.+. + ..++....+++.+.++..||+.++++
T Consensus 126 ~~~---------~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 126 EVE---------LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TCC---------CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred Hcc---------CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 321 222345688888773 3 45667888999998888899888755
No 78
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=81.26 E-value=8.4 Score=32.52 Aligned_cols=134 Identities=10% Similarity=0.000 Sum_probs=76.3
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcC------C---CCCCcceEEeecCCCchHHHHHHh
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVG------A---KIPRSCLFLHVPLESSNIQQALRA 182 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~------~---~~p~~~~~v~vdld~~dw~~~L~~ 182 (317)
..|+-+|||-=.-...|... +..++=||. |++++.-++...... . ....+++++..|+..-...+ .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~---~ 99 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD---I 99 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH---H
T ss_pred CEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc---C
Confidence 57999999965444445321 457888887 555554333332100 0 00136788888886422211 0
Q ss_pred cCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcE-EE--EeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 183 KGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCL-FL--GELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 183 ~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~-l~--~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
..|| ++++-++ .+++.++...+++.+.++..||+. ++ .++... ......-..+...+.++|.+ ||++.
T Consensus 100 ~~fD-----~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~--~~~~~~~~~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 100 GHCA-----AFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA--LLEGPPFSVPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp HSEE-----EEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS--SSSSCCCCCCHHHHHHTSCS-SEEEE
T ss_pred CCEE-----EEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc--ccCCCCCCCCHHHHHHHhcC-CcEEE
Confidence 2354 4555666 478888888899999998889886 22 233211 00000111234556678888 99864
No 79
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=79.97 E-value=4.4 Score=35.75 Aligned_cols=105 Identities=8% Similarity=0.023 Sum_probs=60.8
Q ss_pred CceEEEeCCCCC--CcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh-----c
Q 021091 112 LKQVVLLTDGMD--TRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA-----K 183 (317)
Q Consensus 112 ~~QVV~LGAGLD--TRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~-----~ 183 (317)
...|+-+|||-= +..+--..|.+.+++=+|. |++++.-++.++..+. ..+++++..|.. ++...+.. .
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~--~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPAL--PVLDEMIKDEKNHG 155 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHSGGGTT
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHH--HHHHHHHhccCCCC
Confidence 458999999753 4432222343456666665 5566665566665542 235666666543 33444532 2
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 184 GFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 184 Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
.|| ++++-+. .......++.+..+..||+.+++|-..
T Consensus 156 ~fD-----~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 156 SYD-----FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp CBS-----EEEECSC----STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CEE-----EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 344 3343332 223466777888888899999998543
No 80
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=79.71 E-value=9.3 Score=32.35 Aligned_cols=100 Identities=15% Similarity=0.097 Sum_probs=63.6
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...+... ..++=+|. |++++.-++.+...+ .+++++..|+.... +. +.--
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---------~~-~~fD 98 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMRELE---------LP-EPVD 98 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGCC---------CS-SCEE
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhcC---------CC-CCcC
Confidence 58999999986544444322 46666676 556555445454432 25677777764211 11 2234
Q ss_pred EEEEcC-C-CCC-CHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 192 VWAIQG-L-PVM-TLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 192 l~i~EG-v-~YL-~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
++++-+ + .|+ +.++...+++.+.++..||+.++++.+
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 99 AITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 555543 5 476 677889999999998889999888753
No 81
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=78.52 E-value=3.1 Score=36.85 Aligned_cols=123 Identities=10% Similarity=0.043 Sum_probs=69.5
Q ss_pred HHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCC-CCcceEEeecCCCch
Q 021091 98 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKI-PRSCLFLHVPLESSN 175 (317)
Q Consensus 98 iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~-p~~~~~v~vdld~~d 175 (317)
+.+++.+.+... +...|+-+|||.=.-...|... +..++=+|. |++++.-++......... ..+..++..|+. +
T Consensus 45 ~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~--~ 120 (293)
T 3thr_A 45 YKAWLLGLLRQH-GCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL--T 120 (293)
T ss_dssp HHHHHHHHHHHT-TCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG--G
T ss_pred HHHHHHHHhccc-CCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh--h
Confidence 334444444432 3458999999986655555221 346777776 455554333332221110 013444444443 3
Q ss_pred HHHHHHhcCCCCCCCEEEEEcC-C-CCCCH-----HHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 176 IQQALRAKGFNGNRPSVWAIQG-L-PVMTL-----ASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 176 w~~~L~~~Gfd~~~Ptl~i~EG-v-~YL~~-----~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
+.+.+ +..+.--++++-| + .+++. ++...+|+.+.++..||+.+++..+
T Consensus 121 ~~~~~----~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDKDV----PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHHS----CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Ccccc----ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 32222 2334455677763 4 46665 7889999999999889999887754
No 82
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=78.35 E-value=5.6 Score=34.56 Aligned_cols=131 Identities=13% Similarity=0.090 Sum_probs=72.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+... ...++=+|. |++++.-++.+...+. .++.++..|+..-. |..+.-
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~l~---------~~~~~f 104 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGH---QQVEYVQGDAEQMP---------FTDERF 104 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCC-CCC---------SCTTCE
T ss_pred CCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEecHHhCC---------CCCCCE
Confidence 458999999965444344211 126777776 6666665555555431 26788888875311 211222
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eC--chh--hhh----hh-----cCCCCcchHHHHHHHHhCCC
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-EL--PAW--LAE----TE-----FGNKSTTEKWMDKLFMSNGF 255 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~--~~~--~~~----~~-----~~~~~~~~~w~~~~l~~~Gw 255 (317)
-++++-.+ .+++ +...+|+.+.+...||+.+++ +. +.. ... .. ......+.....++|.++||
T Consensus 105 D~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 182 (260)
T 1vl5_A 105 HIVTCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGF 182 (260)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTC
T ss_pred EEEEEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCC
Confidence 34444444 4664 235788888888888887765 32 111 100 00 01122233334688999999
Q ss_pred ee
Q 021091 256 GV 257 (317)
Q Consensus 256 ~~ 257 (317)
.+
T Consensus 183 ~~ 184 (260)
T 1vl5_A 183 EL 184 (260)
T ss_dssp EE
T ss_pred eE
Confidence 85
No 83
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=78.24 E-value=21 Score=29.46 Aligned_cols=97 Identities=7% Similarity=-0.054 Sum_probs=55.4
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC-C
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR-P 190 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~-P 190 (317)
..|+-+|||.=.-...+... +..++=+|. |.+++.-++. .+..++..|+. .+....+.++. -
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~------~~~~~~~~~~~~f 117 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA---------GAGEVHLASYA------QLAEAKVPVGKDY 117 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT---------CSSCEEECCHH------HHHTTCSCCCCCE
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh---------cccccchhhHH------hhcccccccCCCc
Confidence 68999999986555444322 456777776 4444332221 13455555532 12111222222 3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
-++++-.+++ .++...+++.+.+...||+.+++..
T Consensus 118 D~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 118 DLICANFALL--HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp EEEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 4566655544 4456688889999888888877653
No 84
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=78.14 E-value=9.4 Score=33.19 Aligned_cols=116 Identities=10% Similarity=-0.015 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCc
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 174 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~ 174 (317)
+.++.++... .. .....|+-+|||.=.-...+....+..++=+|. |+.++.-++.+...+. +.+++++..|+..-
T Consensus 48 ~~~~~l~~~~-~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 48 RLTDEMIALL-DV-RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHS-CC-CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC
T ss_pred HHHHHHHHhc-CC-CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccC
Confidence 3345444433 21 233589999999765444442111356666666 5555554555555432 23688888887631
Q ss_pred hHHHHHHhcCCCCCCCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 175 NIQQALRAKGFNGNRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 175 dw~~~L~~~Gfd~~~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
. +..+.--++++-+++ +++. ...+|+.+.+...||+.+++.
T Consensus 124 ~---------~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 124 P---------FEDASFDAVWALESLHHMPD--RGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp C---------SCTTCEEEEEEESCTTTSSC--HHHHHHHHHTTEEEEEEEEEE
T ss_pred C---------CCCCCccEEEEechhhhCCC--HHHHHHHHHHHcCCCeEEEEE
Confidence 1 222333456666664 5633 267888999988888876643
No 85
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=77.57 E-value=4.6 Score=34.28 Aligned_cols=110 Identities=9% Similarity=0.010 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCc
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 174 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~ 174 (317)
..+.+.+.+.+. +...|+-+|||.=.-...+... +..++=+|. |++++.-++.+ .+.+++..|+...
T Consensus 28 ~~~~~~l~~~~~---~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 28 SDIADLVRSRTP---EASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL--------PDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHHCT---TCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTC
T ss_pred HHHHHHHHHhcC---CCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHc
Confidence 345555555442 2358999999976544444211 125666666 55555433322 1467777777532
Q ss_pred hHHHHHHhcCCCCCCCEEEE-EcCC-CCC-CHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 175 NIQQALRAKGFNGNRPSVWA-IQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 175 dw~~~L~~~Gfd~~~Ptl~i-~EGv-~YL-~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
. + +..--+++ .-++ .|+ ++++...+|+.+.++..||+.++++.
T Consensus 96 ~---------~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 96 R---------L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp C---------C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred c---------c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 1 1 12223555 4556 476 55788999999999988999888763
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=76.89 E-value=4.6 Score=35.71 Aligned_cols=99 Identities=10% Similarity=-0.048 Sum_probs=64.0
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +..++=+|. |.+++.-++.+...+. +++++..|+..... .+.-
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~----------~~~f 185 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL----NISTALYDINAANI----------QENY 185 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC----CEEEEECCGGGCCC----------CSCE
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC----ceEEEEeccccccc----------cCCc
Confidence 358999999976544444221 346666675 5555554555555431 56777777653111 1233
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
-++++-++ .|++.+....+++.+.++..||+.+++
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 46677777 478888899999999999888887543
No 87
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=76.37 E-value=6.3 Score=36.59 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=61.8
Q ss_pred CCceEEEeCCCC-CCcccccC-CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCC
Q 021091 111 GLKQVVLLTDGM-DTRPYRLN-WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNG 187 (317)
Q Consensus 111 g~~QVV~LGAGL-DTRa~RL~-~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~ 187 (317)
....|+.+|||- ---+.-+. .+ +.+++=||. |++++.-++.+++.+. .+++++..|+. ++ ...+||
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~--~l----~d~~FD- 190 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDET--VI----DGLEFD- 190 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGG--GG----GGCCCS-
T ss_pred CcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchh--hC----CCCCcC-
Confidence 346899999994 21111121 22 466777776 6777776777776653 36888887764 22 244565
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 188 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 188 ~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
.+|+ .++ .++...+++.+.+...||+++++..
T Consensus 191 ---vV~~-~a~----~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 191 ---VLMV-AAL----AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ---EEEE-CTT----CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ---EEEE-CCC----ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 4444 444 2445678888888888999887764
No 88
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=75.81 E-value=11 Score=31.97 Aligned_cols=98 Identities=7% Similarity=-0.038 Sum_probs=55.8
Q ss_pred CceEEEeCCCCCCcccccC-CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN-WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~-~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||.=.-...+. .+. ..++=+|. |++++.-++.+.. .+++++..|+.... +..+.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~---------~~~~~ 107 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLH---------LPQDS 107 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCC---------CCTTC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhcc---------CCCCC
Confidence 3589999999754333332 222 15555665 4555443332221 25677777664211 11223
Q ss_pred CEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 190 PSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 190 Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
--++++-.++ +++ +...+|+.+.+...||+.+++..
T Consensus 108 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 108 FDLAYSSLALHYVE--DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEeccccccc--hHHHHHHHHHHhcCcCcEEEEEe
Confidence 3455555564 564 45678888998888888877654
No 89
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=75.67 E-value=11 Score=32.97 Aligned_cols=125 Identities=13% Similarity=0.071 Sum_probs=70.1
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+..-....++=||. |++++.-++.+...+. ..++.++..|+. ++... +..+.-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~--~~~v~~~~~D~~--~~~~~-----~~~~~f 120 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL--EDQIEIIEYDLK--KITDL-----IPKERA 120 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC--TTTEEEECSCGG--GGGGT-----SCTTCE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC--cccEEEEECcHH--Hhhhh-----hccCCc
Confidence 4589999999876555552211226666665 5555554455554432 235777777765 22211 222333
Q ss_pred EEEEEcCCCCCCH--------------------HHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHH
Q 021091 191 SVWAIQGLPVMTL--------------------ASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLF 250 (317)
Q Consensus 191 tl~i~EGv~YL~~--------------------~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l 250 (317)
-++++-- +|+.. .....+++.+.++..||+.+++-.+... .......+
T Consensus 121 D~Ii~np-Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------~~~~~~~l 188 (259)
T 3lpm_A 121 DIVTCNP-PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER-----------LLDIIDIM 188 (259)
T ss_dssp EEEEECC-CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT-----------HHHHHHHH
T ss_pred cEEEECC-CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH-----------HHHHHHHH
Confidence 4555421 23322 4567789999998888888877543211 11234567
Q ss_pred HhCCCee
Q 021091 251 MSNGFGV 257 (317)
Q Consensus 251 ~~~Gw~~ 257 (317)
.++||..
T Consensus 189 ~~~~~~~ 195 (259)
T 3lpm_A 189 RKYRLEP 195 (259)
T ss_dssp HHTTEEE
T ss_pred HHCCCce
Confidence 8889985
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=75.67 E-value=5.7 Score=34.13 Aligned_cols=135 Identities=11% Similarity=0.015 Sum_probs=68.9
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+......+++=||. |++++.-++.....+ .+..++..|+. ++... +..+.-
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~--~~~~~-----~~~~~f 129 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWE--DVAPT-----LPDGHF 129 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHH--HHGGG-----SCTTCE
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC----CCeEEEecCHH--Hhhcc-----cCCCce
Confidence 3589999999765444443212235666776 556655445444432 24555555442 22111 222222
Q ss_pred EEEEE--cCC--CCCCHHHHHHHHHHHHhccCCCcEEEE-eCchhhhhhhcCCCCcchHHH---HHHHHhCCCee
Q 021091 191 SVWAI--QGL--PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGNKSTTEKWM---DKLFMSNGFGV 257 (317)
Q Consensus 191 tl~i~--EGv--~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~~~~~~~~~~~~~~~~~~w~---~~~l~~~Gw~~ 257 (317)
-++++ =++ .+...+....+++.+.++..||..+++ ++..+..............|. ...|.+.||..
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 34444 222 234556667889999998888888774 433221111111111111111 24678899985
No 91
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=75.56 E-value=5.3 Score=35.16 Aligned_cols=147 Identities=7% Similarity=0.057 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCccccc-CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCC
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES 173 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL-~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~ 173 (317)
-.+|++-.......+....|+-||||+=+.+..+ ...++++|+=+|. +.+++.-++.+...+.. .++...|+
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~----~~v~~~d~-- 107 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT----IKYRFLNK-- 107 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS----SEEEEECC--
T ss_pred HhHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC----ccEEEecc--
Confidence 3566654442221234568999999999999888 3334679999997 66788877777776521 12222433
Q ss_pred chHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHh
Q 021091 174 SNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMS 252 (317)
Q Consensus 174 ~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~ 252 (317)
........| =++++-=+ .+| .+.-..+.+.+..+-++|-.|.|+.-.-..+. .++...-..|.+++..+
T Consensus 108 ---~~~~~~~~~-----DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfptksl~Gr~-~gm~~~Y~~~~~~~~~~ 177 (200)
T 3fzg_A 108 ---ESDVYKGTY-----DVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFPIKSLSGKE-KGMEENYQLWFESFTKG 177 (200)
T ss_dssp ---HHHHTTSEE-----EEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEECCCCC--C-TTCCCCHHHHHHHHTTT
T ss_pred ---cccCCCCCc-----ChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCC-cchhhhHHHHHHHhccC
Confidence 222222223 34454444 467 44333344444444333444567721101110 12333345566777889
Q ss_pred CCCeee
Q 021091 253 NGFGVG 258 (317)
Q Consensus 253 ~Gw~~~ 258 (317)
.+|.++
T Consensus 178 ~~~~~~ 183 (200)
T 3fzg_A 178 WIKILD 183 (200)
T ss_dssp TSCEEE
T ss_pred cceeee
Confidence 999875
No 92
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=75.26 E-value=34 Score=28.26 Aligned_cols=120 Identities=13% Similarity=0.076 Sum_probs=70.5
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+ ..| ..+++=+|. |++++.-++.++..+. .+++++..|+.. .+ .. ..
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~-~~-~~-------~~ 107 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPE-GL-DD-------LP 107 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTT-TC-TT-------SC
T ss_pred CCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhh-hh-hc-------CC
Confidence 358999999965444444 223 356777776 5566555555555542 367777777642 11 00 01
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
..-++++-+..+ ....+++.+.+...||+.+++..+... ......+++.++||.++
T Consensus 108 ~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 108 DPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAVTLD----------TLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp CCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEECBHH----------HHHHHHHHHHHTTCEEE
T ss_pred CCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEecccc----------cHHHHHHHHHHCCCcee
Confidence 233555555433 456788888888889888887643211 11224567899999644
No 93
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=75.21 E-value=5.3 Score=37.61 Aligned_cols=121 Identities=7% Similarity=0.081 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 172 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld 172 (317)
.|+..+.+.+.+.....+ ...|+-||||.=.-...+...+..+++=||..++++.-++.++..+. +.+++++..|+.
T Consensus 46 ~r~~~~~~~i~~~~~~~~-~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~--~~~v~~~~~d~~ 122 (376)
T 3r0q_C 46 VRMDAYFNAVFQNKHHFE-GKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNL--DHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHHHHTTTTTTT-TCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTC--TTTEEEEESCGG
T ss_pred HHHHHHHHHHHhccccCC-CCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCC--CCeEEEEECchh
Confidence 355555565554433222 35899999998654444421112255555555666665666666542 235788888875
Q ss_pred CchHHHHHHhcCCCCCCCEEEEEcCCCC-C-CHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 173 SSNIQQALRAKGFNGNRPSVWAIQGLPV-M-TLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 173 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y-L-~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
. +. + +..--+++++.+.| + .+.....+++.+.++..||+.++++
T Consensus 123 ~--~~-------~-~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 123 D--IS-------L-PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp G--CC-------C-SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred h--cC-------c-CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 2 21 1 13446788888754 4 3356788999998888888888765
No 94
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=73.33 E-value=11 Score=33.18 Aligned_cols=96 Identities=6% Similarity=0.028 Sum_probs=58.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+..+ +..++=+|. |++++.-++.+ .+++++..|+.. |. ++ +.-
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~--~~-------~~-~~f 118 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY--------PHLHFDVADARN--FR-------VD-KPL 118 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTT--CC-------CS-SCE
T ss_pred CCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhh--CC-------cC-CCc
Confidence 358999999976544444323 457777776 55555433332 257788887763 21 11 222
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
-++++-.+ .+++ +...+|+.+.+...||+.+++..+
T Consensus 119 D~v~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 119 DAVFSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEec
Confidence 35555555 4554 345788888888888888877643
No 95
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=72.48 E-value=5.2 Score=35.98 Aligned_cols=95 Identities=12% Similarity=0.115 Sum_probs=57.0
Q ss_pred CcceEEeecCCCchHHHHHHhcCCCCCCCEEEEEcCCC-CC----CHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhh-
Q 021091 162 RSCLFLHVPLESSNIQQALRAKGFNGNRPSVWAIQGLP-VM----TLASFEDVLLLVGSLAMNKCLFLGELPAWLAETE- 235 (317)
Q Consensus 162 ~~~~~v~vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv~-YL----~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~- 235 (317)
.+++++..|+.... . .+.. +....--++++-+++ |+ ..+....+|+.+.++..||+.++++...|..-..
T Consensus 154 ~~v~f~~~d~~~~~-~-~~~~--~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~ 229 (292)
T 3g07_A 154 NNVVFVTGNYVLDR-D-DLVE--AQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKR 229 (292)
T ss_dssp TTEEEEECCCCCSS-H-HHHT--TCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTT
T ss_pred ccceEEecccccCc-c-cccc--ccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhh
Confidence 46788888876321 1 2211 223344577777774 76 5668899999999998899999988655432100
Q ss_pred -----------cCCCCcchHHHHHHHHh--CCCee-eecC
Q 021091 236 -----------FGNKSTTEKWMDKLFMS--NGFGV-GMVS 261 (317)
Q Consensus 236 -----------~~~~~~~~~w~~~~l~~--~Gw~~-~~~~ 261 (317)
......... ...+|.+ +||+. +.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~p~~-~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 230 KTLTETIYKNYYRIQLKPEQ-FSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp TTSCHHHHHHHHHCCCCGGG-HHHHHTSTTTCCCEEEEC-
T ss_pred hcccHHHHhhhhcEEEcHHH-HHHHHHhcCCCceEEEEec
Confidence 011111222 3567888 99984 5543
No 96
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=71.92 E-value=14 Score=32.56 Aligned_cols=136 Identities=10% Similarity=-0.128 Sum_probs=75.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+....+.+++=+|. |++++.-++.+...+. +.+++++..|+..-. +..+.-
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~---------~~~~~f 151 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFLEIP---------CEDNSY 151 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTTSCS---------SCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcccCC---------CCCCCE
Confidence 3589999999654443442100346666666 4555554555555442 236888888876311 222233
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchh---h-----hhhh--cCC-CCcchHHHHHHHHhCCCee-
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAW---L-----AETE--FGN-KSTTEKWMDKLFMSNGFGV- 257 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~---~-----~~~~--~~~-~~~~~~w~~~~l~~~Gw~~- 257 (317)
-++++-++ .+++. ...+|+.+.+...||+.+++..+.. . .... ... ...+.....++|.++||++
T Consensus 152 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 229 (297)
T 2o57_A 152 DFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTL 229 (297)
T ss_dssp EEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEE
T ss_pred eEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEE
Confidence 45566566 45644 5778888999888888766542210 0 0000 011 1112333457899999996
Q ss_pred eec
Q 021091 258 GMV 260 (317)
Q Consensus 258 ~~~ 260 (317)
+..
T Consensus 230 ~~~ 232 (297)
T 2o57_A 230 RTF 232 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 97
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=71.76 E-value=18 Score=30.43 Aligned_cols=108 Identities=13% Similarity=0.038 Sum_probs=62.9
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+-+|||.=.-...+ ..|++.+++=+|. |+.++.-++.++..+. ..+++++..|.. ++...+...+ ..+.
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~~~~~~-~~~~ 140 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAK--DTLAELIHAG-QAWQ 140 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHHHHTTT-CTTC
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHH--HHHHHhhhcc-CCCC
Confidence 58999999865433333 2343566777776 5666665666666543 235777766653 3333443211 1112
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 190 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 190 Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
--+++.-+ .......+++.+.++..||+.++++-..
T Consensus 141 fD~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 141 YDLIYIDA----DKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ccEEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 23444333 2445667888888888899998887543
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=70.98 E-value=31 Score=27.54 Aligned_cols=104 Identities=9% Similarity=-0.033 Sum_probs=62.2
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCC-cceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPR-SCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~-~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||.=.-...+... +..++=+|. |++++.-++.+...+. +. +.+++..|+... . . .+.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~~d~~~~-~----~-----~~~ 119 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNL--DNYDIRVVHSDLYEN-V----K-----DRK 119 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC--TTSCEEEEECSTTTT-C----T-----TSC
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECchhcc-c----c-----cCC
Confidence 458999999975544444221 455666665 5555554555554431 11 277777776531 1 1 123
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 190 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 190 Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
--++++-...+...+....+++.+.++..||+.+++..+
T Consensus 120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 345665444334467788899999998888888776643
No 99
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=70.67 E-value=2.6 Score=37.13 Aligned_cols=104 Identities=14% Similarity=0.036 Sum_probs=59.5
Q ss_pred CceEEEeCCCCC--CcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh----cC
Q 021091 112 LKQVVLLTDGMD--TRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA----KG 184 (317)
Q Consensus 112 ~~QVV~LGAGLD--TRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~----~G 184 (317)
...|+-+|||.= |..+--..+.+.+++=||. |+.++.-++.++..+. ..+++++..|.. ++...+.. ..
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~--~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPAL--DTLHSLLNEGGEHQ 136 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHH--HHHHHHHHHHCSSC
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHhhccCCCC
Confidence 358999999754 4432222333455666665 4444444455555442 236777777653 33444432 23
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 185 FNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 185 fd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
|| ++++-+. .......++.+.++..||+.+++|-.
T Consensus 137 fD-----~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 137 FD-----FIFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EE-----EEEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred Ee-----EEEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 44 4444333 34455678888888889999998854
No 100
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=70.65 E-value=3.6 Score=38.42 Aligned_cols=94 Identities=6% Similarity=0.028 Sum_probs=63.1
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...|+-+|||-=.-...+ ..| +++++-+|.|++++.-+ + . .+++++..|+.. .+ ++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~----~----~-~~v~~~~~d~~~-~~----------~~ 267 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYP-LIKGINFDLPQVIENAP----P----L-SGIEHVGGDMFA-SV----------PQ 267 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC----C----C-TTEEEEECCTTT-CC----------CC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeChHHHHHhhh----h----c-CCCEEEeCCccc-CC----------CC
Confidence 4568999999976544444 244 57888888887775311 1 1 258888888763 21 11
Q ss_pred CCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEE-Ee
Q 021091 189 RPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFL-GE 226 (317)
Q Consensus 189 ~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~-~d 226 (317)
--++++-.++ +++.++...+|+.+.+...||+.++ .|
T Consensus 268 -~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 268 -GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp -EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2455666664 7888888899999999888888654 44
No 101
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=70.50 E-value=23 Score=29.99 Aligned_cols=125 Identities=10% Similarity=0.048 Sum_probs=69.8
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+-+|||.=.-...| ..| +..++=||. +++++.-++.+...+. .+++++..|+. ++...+....||
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~---~nv~~~~~d~~--~l~~~~~~~~~d--- 110 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEA---QNVKLLNIDAD--TLTDVFEPGEVK--- 110 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCC---SSEEEECCCGG--GHHHHCCTTSCC---
T ss_pred ceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCC---CCEEEEeCCHH--HHHhhcCcCCcC---
Confidence 47999999976544444 233 467777776 4555544444444431 26777777765 333322222232
Q ss_pred CEEEEEcCCCCCCHHH------HHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCee
Q 021091 190 PSVWAIQGLPVMTLAS------FEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 190 Ptl~i~EGv~YL~~~~------v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
.+++.-...+..... ...+++.+.+...||+.+++...... -..|..+.|.++||..
T Consensus 111 -~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~----------~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 111 -RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG----------LFEYSLKSFSEYGLLL 173 (213)
T ss_dssp -EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH----------HHHHHHHHHHHHTCEE
T ss_pred -EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH----------HHHHHHHHHHHCCCcc
Confidence 444432223332211 35678888888788888876542110 1245556778889975
No 102
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=69.62 E-value=40 Score=26.78 Aligned_cols=122 Identities=11% Similarity=0.064 Sum_probs=67.5
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+.+|||.=.-...+.... ..++=+|. |+.++.-++.+...+. ..++.++..|+ .+.+... ...
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~-----~~~~~~~----~~~ 101 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGL--GDNVTLMEGDA-----PEALCKI----PDI 101 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC--CTTEEEEESCH-----HHHHTTS----CCE
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCC--CcceEEEecCH-----HHhcccC----CCC
Confidence 3589999999754433332111 45555555 4555554455554432 12555555543 2233221 133
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeeee
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVGM 259 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~~ 259 (317)
-++++-++. .....+++.+.++..||+.+++..+... ......+++.++||.++.
T Consensus 102 D~v~~~~~~----~~~~~~l~~~~~~l~~gG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 102 DIAVVGGSG----GELQEILRIIKDKLKPGGRIIVTAILLE----------TKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp EEEEESCCT----TCHHHHHHHHHHTEEEEEEEEEEECBHH----------HHHHHHHHHHHTTCCCEE
T ss_pred CEEEECCch----HHHHHHHHHHHHhcCCCcEEEEEecCcc----------hHHHHHHHHHHCCCceEE
Confidence 466665552 2347788888888888888777643211 012245778899997653
No 103
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=69.09 E-value=28 Score=29.64 Aligned_cols=131 Identities=11% Similarity=0.097 Sum_probs=73.6
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... ...++=+|. |++++.-++.+...+. .+++++..|+.. +. +..+.-
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~--~~-------~~~~~f 88 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGV---ENVRFQQGTAES--LP-------FPDDSF 88 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTC---CSEEEEECBTTB--CC-------SCTTCE
T ss_pred CCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEeccccc--CC-------CCCCcE
Confidence 458999999986544444221 235666665 5566554555554431 267788877752 11 222233
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE-eCch--h--hhhh-------h--cCCCCcchHHHHHHHHhCCC
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG-ELPA--W--LAET-------E--FGNKSTTEKWMDKLFMSNGF 255 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~~~--~--~~~~-------~--~~~~~~~~~w~~~~l~~~Gw 255 (317)
-++++-.+ .+++ +...+|+.+.+...||+.+++ +... . .... . ......+.....++|.++||
T Consensus 89 D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 166 (239)
T 1xxl_A 89 DIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQL 166 (239)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTE
T ss_pred EEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCC
Confidence 45666656 3554 346788888888888887665 4321 1 1000 0 01222333345688999999
Q ss_pred ee
Q 021091 256 GV 257 (317)
Q Consensus 256 ~~ 257 (317)
..
T Consensus 167 ~~ 168 (239)
T 1xxl_A 167 AY 168 (239)
T ss_dssp EE
T ss_pred cE
Confidence 85
No 104
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=68.60 E-value=10 Score=32.47 Aligned_cols=95 Identities=12% Similarity=0.091 Sum_probs=55.2
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+ ..| +..++=+|. |++++.-++. . .+++++..|+.. +. ....|
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~---~-----~~~~~~~~d~~~--~~---~~~~f--- 96 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR---L-----PNTNFGKADLAT--WK---PAQKA--- 96 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH---S-----TTSEEEECCTTT--CC---CSSCE---
T ss_pred CCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh---C-----CCcEEEECChhh--cC---ccCCc---
Confidence 357999999965433333 122 345555565 4444432222 1 267888888753 21 12223
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
-++++-.+ .+++ +...+|+.+.+...||+.+++..
T Consensus 97 --D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 97 --DLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp --EEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEE
T ss_pred --CEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEe
Confidence 35555555 4663 45678899999888988877654
No 105
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=68.48 E-value=18 Score=33.37 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=65.4
Q ss_pred cCCCceEEEeCCCCCCccccc-CCC--CCcEEEEechhhhHHHHHHHHhhcCC--------------------CCCCcce
Q 021091 109 MDGLKQVVLLTDGMDTRPYRL-NWP--TSTIIFDISPERIFKISAEKLEGVGA--------------------KIPRSCL 165 (317)
Q Consensus 109 ~~g~~QVV~LGAGLDTRa~RL-~~~--~~~~~fEVD~P~v~~~K~~~L~~~~~--------------------~~p~~~~ 165 (317)
++..+.|+++|+|-=.-+--+ ..+ ..++++|+|. +|++.-++.++.... ....++.
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~-~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCH-HHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCH-HHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 355779999999877544222 333 3688999995 677777777754210 1123566
Q ss_pred EEeecCCC----------chHHHHHHhcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccC
Q 021091 166 FLHVPLES----------SNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAM 218 (317)
Q Consensus 166 ~v~vdld~----------~dw~~~L~~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~ 218 (317)
.|-+|+.. ....+.+.++ +.++ -.++..-|.+++..+.+..+++.+.+.++
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~-L~p~-Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~ 220 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRC-LNPG-GIFVAQNGVCFLQQEEAIDSHRKLSHYFS 220 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHT-EEEE-EEEEEEEEESSSCCHHHHHHHHHHHHHCS
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHH-hCCC-CEEEEecCCcccChHHHHHHHHHHHhhCC
Confidence 77777541 2233444332 2222 24455445578888888899999998873
No 106
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=68.13 E-value=23 Score=30.24 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=59.0
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+... +..++=+|. |++++.-++.+.. ...+++++..|+.. +. +..+.-
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~--~~-------~~~~~f 105 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAG----VDRKVQVVQADARA--IP-------LPDESV 105 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTT----SCTTEEEEESCTTS--CC-------SCTTCE
T ss_pred CCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhc----cCCceEEEEccccc--CC-------CCCCCe
Confidence 458999999986655555322 356666665 4555544444321 12367888888752 21 222223
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
-++++-.+ .+++ +...+++.+.+...||+.+++.
T Consensus 106 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCchhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 45555555 4564 3467888888888888877654
No 107
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=68.07 E-value=22 Score=31.18 Aligned_cols=130 Identities=13% Similarity=0.073 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccC-CCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCC
Q 021091 95 TKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLES 173 (317)
Q Consensus 95 Tr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~-~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~ 173 (317)
|+.+-+.+.+.+. + ...|+-+|||.=.-...+. ....+.-+|+|.. .++.-++.....+. .++++..|
T Consensus 107 t~~~~~~l~~~~~--~-~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~-~v~~a~~n~~~~~~----~v~~~~~d--- 175 (254)
T 2nxc_A 107 TRLALKALARHLR--P-GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPM-VLPQAEANAKRNGV----RPRFLEGS--- 175 (254)
T ss_dssp HHHHHHHHHHHCC--T-TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGG-GHHHHHHHHHHTTC----CCEEEESC---
T ss_pred HHHHHHHHHHhcC--C-CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHH-HHHHHHHHHHHcCC----cEEEEECC---
Confidence 3344455555543 3 3589999999865443342 2223444455444 44433333443321 13444333
Q ss_pred chHHHHHHhcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEe-CchhhhhhhcCCCCcchHHHHHHHHh
Q 021091 174 SNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE-LPAWLAETEFGNKSTTEKWMDKLFMS 252 (317)
Q Consensus 174 ~dw~~~L~~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d-~~~~~~~~~~~~~~~~~~w~~~~l~~ 252 (317)
+.+.+... ..-++++-.+ .+....++..+.++..||+.+++. ... .....+.+.+.+
T Consensus 176 --~~~~~~~~-----~fD~Vv~n~~----~~~~~~~l~~~~~~LkpgG~lils~~~~-----------~~~~~v~~~l~~ 233 (254)
T 2nxc_A 176 --LEAALPFG-----PFDLLVANLY----AELHAALAPRYREALVPGGRALLTGILK-----------DRAPLVREAMAG 233 (254)
T ss_dssp --HHHHGGGC-----CEEEEEEECC----HHHHHHHHHHHHHHEEEEEEEEEEEEEG-----------GGHHHHHHHHHH
T ss_pred --hhhcCcCC-----CCCEEEECCc----HHHHHHHHHHHHHHcCCCCEEEEEeecc-----------CCHHHHHHHHHH
Confidence 33333222 2335554322 345678888899888888887664 221 112335677889
Q ss_pred CCCee
Q 021091 253 NGFGV 257 (317)
Q Consensus 253 ~Gw~~ 257 (317)
+||.+
T Consensus 234 ~Gf~~ 238 (254)
T 2nxc_A 234 AGFRP 238 (254)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 99986
No 108
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=67.60 E-value=22 Score=29.65 Aligned_cols=104 Identities=9% Similarity=0.016 Sum_probs=63.2
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCC--CCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKI--PRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~--p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+... +..++=+|. |.+++.-++.+...+... ..+..++..|+.... +..+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~ 100 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS---------FHDS 100 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC---------SCTT
T ss_pred CCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC---------CCCC
Confidence 358999999976544444222 456777776 556665555555443211 124567777765321 2223
Q ss_pred CCEEEEEcCC-CCC-CHHHHHHHHHHHHhccCCCcEEEE
Q 021091 189 RPSVWAIQGL-PVM-TLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL-~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
.--++++-++ .++ +++....+++.+.+...||+.+++
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 3346666666 466 567778899999998888887654
No 109
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=67.57 E-value=11 Score=30.96 Aligned_cols=111 Identities=11% Similarity=0.082 Sum_probs=62.6
Q ss_pred HHHHHHHHHhccCCCceEEEeCCCCCCcccccC-CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCch
Q 021091 98 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN-WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN 175 (317)
Q Consensus 98 iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~-~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~d 175 (317)
+.+.+.+.+. + ...|+.+|||.=.-...+. ... ..++=+|. |.+++.-++.+.. . .+.+++..|+..-
T Consensus 32 ~~~~l~~~~~--~-~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~----~-~~i~~~~~d~~~~- 101 (215)
T 2pxx_A 32 FRALLEPELR--P-EDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH----V-PQLRWETMDVRKL- 101 (215)
T ss_dssp HHHHHGGGCC--T-TCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT----C-TTCEEEECCTTSC-
T ss_pred HHHHHHHhcC--C-CCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc----C-CCcEEEEcchhcC-
Confidence 3344444443 2 3579999999765544442 111 14555554 4455443443332 1 2677787776531
Q ss_pred HHHHHHhcCCCCCCCEEEEEcCCC-CCC-------------HHHHHHHHHHHHhccCCCcEEEEe
Q 021091 176 IQQALRAKGFNGNRPSVWAIQGLP-VMT-------------LASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 176 w~~~L~~~Gfd~~~Ptl~i~EGv~-YL~-------------~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.+..+.--++++-+++ ++. .+....+|+.+.++..||+.+++-
T Consensus 102 --------~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 102 --------DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp --------CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEE
Confidence 1222334567766663 333 456788899999988888876654
No 110
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=65.90 E-value=21 Score=30.92 Aligned_cols=119 Identities=10% Similarity=-0.102 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccC--CCCCcEEEEechh-------hhHHHHHHHHhhcCCCCCCcc
Q 021091 94 TTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLN--WPTSTIIFDISPE-------RIFKISAEKLEGVGAKIPRSC 164 (317)
Q Consensus 94 RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~P-------~v~~~K~~~L~~~~~~~p~~~ 164 (317)
..+..+.++... .- .....|+-+|||-=.-...+. .++..+++=+|.- ++++.-++.+...+. +.++
T Consensus 28 ~~~~~~~l~~~~-~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~--~~~v 103 (275)
T 3bkx_A 28 QTAHRLAIAEAW-QV-KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL--GDRL 103 (275)
T ss_dssp HHHHHHHHHHHH-TC-CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT--GGGE
T ss_pred HHHHHHHHHHHc-CC-CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC--CCce
Confidence 334455555443 21 223589999999876655552 1223566666653 266655555555432 2367
Q ss_pred eEEeec-CCCchHHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 021091 165 LFLHVP-LESSNIQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 165 ~~v~vd-ld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
+++..| +....+ .+....|| ++++-++ .+++... .+++.+..+.+||+.+++
T Consensus 104 ~~~~~d~~~~~~~--~~~~~~fD-----~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 104 TVHFNTNLSDDLG--PIADQHFD-----RVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp EEECSCCTTTCCG--GGTTCCCS-----EEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEE
T ss_pred EEEECChhhhccC--CCCCCCEE-----EEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEE
Confidence 788877 332222 11222344 4445455 4665443 367777777766777654
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=65.52 E-value=45 Score=27.41 Aligned_cols=130 Identities=8% Similarity=0.010 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCc
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESS 174 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~ 174 (317)
+.+-+.+.+.+. + ...|+-+|||.=.-...+...+...++=+|. |++++.-++.+...+. + +++++..|+...
T Consensus 48 ~~~~~~l~~~~~--~-~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~-~v~~~~~d~~~~ 121 (205)
T 3grz_A 48 QLAMLGIERAMV--K-PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI--Y-DIALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHHCS--S-CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC--C-CCEEEESSTTTT
T ss_pred HHHHHHHHHhcc--C-CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEecccccc
Confidence 334444544443 2 3589999999754433342112345666665 5565555555555432 1 377777776421
Q ss_pred hHHHHHHhcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEe-CchhhhhhhcCCCCcchHHHHHHHHhC
Q 021091 175 NIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE-LPAWLAETEFGNKSTTEKWMDKLFMSN 253 (317)
Q Consensus 175 dw~~~L~~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d-~~~~~~~~~~~~~~~~~~w~~~~l~~~ 253 (317)
. ++.--++++-.+ .+....+++.+.++..||+.+++. .... ....+.+.+.++
T Consensus 122 ------~-----~~~fD~i~~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~~~~~~ 175 (205)
T 3grz_A 122 ------V-----DGKFDLIVANIL----AEILLDLIPQLDSHLNEDGQVIFSGIDYL-----------QLPKIEQALAEN 175 (205)
T ss_dssp ------C-----CSCEEEEEEESC----HHHHHHHGGGSGGGEEEEEEEEEEEEEGG-----------GHHHHHHHHHHT
T ss_pred ------C-----CCCceEEEECCc----HHHHHHHHHHHHHhcCCCCEEEEEecCcc-----------cHHHHHHHHHHc
Confidence 0 122234444332 344677888888888888887764 3211 122245778899
Q ss_pred CCee
Q 021091 254 GFGV 257 (317)
Q Consensus 254 Gw~~ 257 (317)
||+.
T Consensus 176 Gf~~ 179 (205)
T 3grz_A 176 SFQI 179 (205)
T ss_dssp TEEE
T ss_pred CCce
Confidence 9986
No 112
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=65.51 E-value=11 Score=32.04 Aligned_cols=109 Identities=10% Similarity=0.053 Sum_probs=59.5
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+. .+.+.+++=||. |++++.-++.++..+. ..+++++..|+. ++...+.. .++..
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~l~~~~~-~~~~~ 133 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQ--DLIPQLKK-KYDVD 133 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHH--HHGGGTTT-TSCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHH--HHHHHHHH-hcCCC
Confidence 3589999998755444442 233567777776 6666665565665542 225666666642 22222211 11122
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
.--++++-+. ..+ .....++..+ .+..||+.++++-.
T Consensus 134 ~fD~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 134 TLDMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp CCSEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred ceEEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCC
Confidence 3345666665 221 2223455556 67779999998853
No 113
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=64.69 E-value=23 Score=30.42 Aligned_cols=109 Identities=12% Similarity=0.023 Sum_probs=60.6
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+.+|||.=.-...+ ..+.+.+++=+|. |+.++.-++.+...+. ..+++++..|.. ++...+...+- .+.
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~--~~l~~l~~~~~-~~~ 148 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPAL--ATLEQLTQGKP-LPE 148 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHH--HHHHHHHTSSS-CCC
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHHHHhcCC-CCC
Confidence 58999999844322233 2333456666665 5555555555555442 124666665543 33344432110 012
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchh
Q 021091 190 PSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAW 230 (317)
Q Consensus 190 Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~ 230 (317)
--++++-+. ......+++.+..+..||+.+++|-..|
T Consensus 149 fD~V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 149 FDLIFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEEEECSC----GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred cCEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 234444443 3455678888888888999999886443
No 114
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=64.30 E-value=20 Score=31.40 Aligned_cols=140 Identities=11% Similarity=-0.004 Sum_probs=71.8
Q ss_pred ceEEEeCCCCCCcccccCCCCCc-EEEEech-hhhHHHHHHHHhhcCCCC--------------------------CCcc
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTST-IIFDISP-ERIFKISAEKLEGVGAKI--------------------------PRSC 164 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~-~~fEVD~-P~v~~~K~~~L~~~~~~~--------------------------p~~~ 164 (317)
..|+-||||- ...-.+....+. .++=+|. |.+++.-++.++...... ..++
T Consensus 57 ~~vLDiGCG~-G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (263)
T 2a14_A 57 DTLIDIGSGP-TIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAV 135 (263)
T ss_dssp EEEEESSCTT-CCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHE
T ss_pred ceEEEeCCCc-cHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhh
Confidence 5799999998 443333211233 5777787 455554343333221000 0011
Q ss_pred -eEEeecCCCchHHHHHHhcCCCCCCCEEEEEcCC-CCC--CHHHHHHHHHHHHhccCCCcEEEEeCc-h--hhhhhh--
Q 021091 165 -LFLHVPLESSNIQQALRAKGFNGNRPSVWAIQGL-PVM--TLASFEDVLLLVGSLAMNKCLFLGELP-A--WLAETE-- 235 (317)
Q Consensus 165 -~~v~vdld~~dw~~~L~~~Gfd~~~Ptl~i~EGv-~YL--~~~~v~~Ll~~ia~ls~~gS~l~~d~~-~--~~~~~~-- 235 (317)
+++..|+...+....+ .+ ..--++++=.+ .|+ +.++...+|+.|.++..||+.+++... . +.....
T Consensus 136 ~~~~~~D~~~~~~~~~~----~~-~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~ 210 (263)
T 2a14_A 136 KRVLKCDVHLGNPLAPA----VL-PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKRE 210 (263)
T ss_dssp EEEEECCTTSSSTTTTC----CC-CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEE
T ss_pred heEEeccccCCCCCCcc----cc-CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeE
Confidence 1566666532211100 01 12234445444 343 457788999999999999988776531 1 000000
Q ss_pred cCCCCcchHHHHHHHHhCCCeee
Q 021091 236 FGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 236 ~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
......+...+.+.|.++||.+.
T Consensus 211 ~~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 211 FSCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEE
T ss_pred eeccccCHHHHHHHHHHCCCEEE
Confidence 00111244456788999999963
No 115
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=63.93 E-value=60 Score=28.37 Aligned_cols=119 Identities=12% Similarity=0.119 Sum_probs=70.8
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+-+|||-=.-...+. .| +..++=+|. |+.++.-++.....+. + +++++..|+... +.. +.
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~--~-~v~~~~~d~~~~-----~~~-----~~ 176 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAI--K-NIHILQSDWFSA-----LAG-----QQ 176 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTC--C-SEEEECCSTTGG-----GTT-----CC
T ss_pred CEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEEcchhhh-----ccc-----CC
Confidence 589999999866544442 33 466777776 5555554444444432 2 577777776521 111 12
Q ss_pred CEEEEEcCCCCCCH-------------------------HHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchH
Q 021091 190 PSVWAIQGLPVMTL-------------------------ASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEK 244 (317)
Q Consensus 190 Ptl~i~EGv~YL~~-------------------------~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~ 244 (317)
--++++- -+|... +....+++.+.++..||+.++++.... ...
T Consensus 177 fD~Iv~n-pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~ 244 (276)
T 2b3t_A 177 FAMIVSN-PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-----------QGE 244 (276)
T ss_dssp EEEEEEC-CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-----------CHH
T ss_pred ccEEEEC-CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-----------HHH
Confidence 2344442 123221 456788899999888999998886421 122
Q ss_pred HHHHHHHhCCCee
Q 021091 245 WMDKLFMSNGFGV 257 (317)
Q Consensus 245 w~~~~l~~~Gw~~ 257 (317)
.+.++|.++||..
T Consensus 245 ~~~~~l~~~Gf~~ 257 (276)
T 2b3t_A 245 AVRQAFILAGYHD 257 (276)
T ss_dssp HHHHHHHHTTCTT
T ss_pred HHHHHHHHCCCcE
Confidence 2557788999974
No 116
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=63.60 E-value=8.9 Score=34.92 Aligned_cols=151 Identities=7% Similarity=-0.028 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEee
Q 021091 91 YCLTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHV 169 (317)
Q Consensus 91 ~~~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~v 169 (317)
.-.|--.+|.+-...... +...-|+-||||+=+.+.-+- + ..+|+=+|. +.++++=++.+...+ .+..+...
T Consensus 86 TrerLp~ld~fY~~i~~~-~~p~~VLDlGCG~gpLal~~~-~-~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~ 158 (253)
T 3frh_A 86 TKERLAELDTLYDFIFSA-ETPRRVLDIACGLNPLALYER-G-IASVWGCDIHQGLGDVITPFAREKD----WDFTFALQ 158 (253)
T ss_dssp HHHHGGGHHHHHHHHTSS-CCCSEEEEETCTTTHHHHHHT-T-CSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEEC
T ss_pred HHHHhhhHHHHHHHHhcC-CCCCeEEEecCCccHHHHHhc-c-CCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEe
Confidence 344556788877666553 446789999999998765443 3 455555554 345565556666543 14667777
Q ss_pred cCCCchHHHHHHhcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHH
Q 021091 170 PLESSNIQQALRAKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKL 249 (317)
Q Consensus 170 dld~~dw~~~L~~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~ 249 (317)
|+....+.. .+| ++++.--+.+|..++-..+++.+..+-+++-.+.|+.-.-..+. .++...-..|.+++
T Consensus 159 D~~~~~~~~-----~~D----vvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~-~gm~~~Y~~~~e~~ 228 (253)
T 3frh_A 159 DVLCAPPAE-----AGD----LALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRG-KGMEANYAAWFEGG 228 (253)
T ss_dssp CTTTSCCCC-----BCS----EEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC------------CHHHHHHHH
T ss_pred ecccCCCCC-----Ccc----hHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCC-cchhhHHHHHHHHH
Confidence 766432211 122 44444333467666555667777777656555666621111100 12222334556677
Q ss_pred HHhCCCeee
Q 021091 250 FMSNGFGVG 258 (317)
Q Consensus 250 l~~~Gw~~~ 258 (317)
..+.+|.++
T Consensus 229 ~~~~~~~~~ 237 (253)
T 3frh_A 229 LPAEFEIED 237 (253)
T ss_dssp SCTTEEEEE
T ss_pred hhccchhhh
Confidence 788889875
No 117
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=62.50 E-value=66 Score=26.87 Aligned_cols=119 Identities=9% Similarity=-0.018 Sum_probs=66.5
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+... +.+++=||. |+.++.-++.++..+. +.+++++..|+.. .+ ..+ ..||
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~-~~-~~~--~~~D---- 124 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPA-AL-ADL--PLPE---- 124 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTG-GG-TTS--CCCS----
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhh-hc-ccC--CCCC----
Confidence 358999999974433333211 455666665 5565554455555432 2367888887752 11 110 1232
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
++++.+.. ... +++.+.+...||..+++.....-. .....+++.++||.+.
T Consensus 125 -~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~~~~~~----------~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 125 -AVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANAVTLES----------ETLLTQLHARHGGQLL 175 (204)
T ss_dssp -EEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEECSHHH----------HHHHHHHHHHHCSEEE
T ss_pred -EEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEecCccc----------HHHHHHHHHhCCCcEE
Confidence 44444322 233 788888888899998887542111 1123466788888764
No 118
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=62.49 E-value=16 Score=35.53 Aligned_cols=110 Identities=11% Similarity=0.047 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhccCCCceEEEeCCC-CC---C--ccccc---CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceE
Q 021091 96 KFIDDKLLRTVNHMDGLKQVVLLTDG-MD---T--RPYRL---NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLF 166 (317)
Q Consensus 96 r~iDd~l~~~i~~~~g~~QVV~LGAG-LD---T--Ra~RL---~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~ 166 (317)
.+++.++..... ....|+-|||| ++ | -..++ -.| +..++=||.-+... .. ..++++
T Consensus 204 ~~Ye~lL~~l~~---~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP-~a~V~GVDiSp~m~------~~-----~~rI~f 268 (419)
T 3sso_A 204 PHYDRHFRDYRN---QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP-RGQIYGLDIMDKSH------VD-----ELRIRT 268 (419)
T ss_dssp HHHHHHHGGGTT---SCCEEEEECCSCTTCSSCCCHHHHHHHHHCT-TCEEEEEESSCCGG------GC-----BTTEEE
T ss_pred HHHHHHHHhhcC---CCCEEEEEecCCCcCCCCCHHHHHHHHHhCC-CCEEEEEECCHHHh------hc-----CCCcEE
Confidence 344555544322 24689999999 21 2 12222 124 46788888733321 11 137899
Q ss_pred EeecCCCchHHHHHH--hcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 167 LHVPLESSNIQQALR--AKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 167 v~vdld~~dw~~~L~--~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
+..|+..-.+...+. ...|| ++++.|..+ .++....|+.+..+..||..++++-
T Consensus 269 v~GDa~dlpf~~~l~~~d~sFD-----lVisdgsH~--~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 269 IQGDQNDAEFLDRIARRYGPFD-----IVIDDGSHI--NAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp EECCTTCHHHHHHHHHHHCCEE-----EEEECSCCC--HHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEecccccchhhhhhcccCCcc-----EEEECCccc--chhHHHHHHHHHHhcCCCeEEEEEe
Confidence 999987545554444 23455 566777644 3566788999999888999887753
No 119
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=62.45 E-value=46 Score=28.76 Aligned_cols=105 Identities=11% Similarity=0.134 Sum_probs=62.8
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh-cCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA-KGFNG 187 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~-~Gfd~ 187 (317)
...|+-+|||.=.-...+ ..|++.+++=||. |+.++.-++.+...+. +.+++++..|+. +....+.. ..||
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~--~~l~~~~~~~~fD- 138 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPAL--QSLESLGECPAFD- 138 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHH--HHHHTCCSCCCCS-
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHH--HHHHhcCCCCCeE-
Confidence 368999999975433333 2333567777776 6676666666666543 235777766643 22222211 1233
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 188 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 188 ~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
++++-+ ........++.+.++..||+.+++|-..
T Consensus 139 ----~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 139 ----LIFIDA----DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ----EEEECS----CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ----EEEECC----chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 344333 2444566888888888899999988543
No 120
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=62.41 E-value=49 Score=30.80 Aligned_cols=127 Identities=13% Similarity=-0.014 Sum_probs=71.8
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEechh-hhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHH--HhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQAL--RAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P-~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L--~~~Gfd~~ 188 (317)
...|+-+|||-=.-...|.. .+..++=+|.. ++++.-++ .+ ...+...+. .+..+.| ....||
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~~~~~~a~~----~~------~~~~~~~~~-~~~~~~l~~~~~~fD-- 173 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSSGVAAKARE----KG------IRVRTDFFE-KATADDVRRTEGPAN-- 173 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHH-TTCEEEEECCCHHHHHHHHT----TT------CCEECSCCS-HHHHHHHHHHHCCEE--
T ss_pred CCEEEEecCCCCHHHHHHHH-cCCcEEEECCCHHHHHHHHH----cC------CCcceeeec-hhhHhhcccCCCCEE--
Confidence 35899999998765555532 24577888874 34432111 11 112222222 2222333 233344
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhh--hhh-h------cCCCCcchHHHHHHHHhCCCee
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWL--AET-E------FGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~--~~~-~------~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
++++-++ .+++ +...+|+.+.++..||+.+++..+... ... . ......+...+.++|.++||++
T Consensus 174 ---~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 247 (416)
T 4e2x_A 174 ---VIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFEL 247 (416)
T ss_dssp ---EEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEE
T ss_pred ---EEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEE
Confidence 5555555 4675 567889999998889999888765321 110 0 0111234455678999999996
No 121
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=62.18 E-value=34 Score=29.26 Aligned_cols=104 Identities=9% Similarity=0.120 Sum_probs=63.0
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...|. .+ +.+++=||. |++++.-++.++..+. +++++++..|+.. .+.+.+ ...||
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~~~-~~~fD-- 144 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALE-QFENVN-DKVYD-- 144 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGG-CHHHHT-TSCEE--
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHH-HHHhhc-cCCcc--
Confidence 3589999998765444442 23 466777776 5666665666666542 2368888887652 222122 22344
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
.+| +-+- .+....+++.+.++..||+.+++|-..
T Consensus 145 --~V~-~~~~----~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 145 --MIF-IDAA----KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp --EEE-EETT----SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred --EEE-EcCc----HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 333 3222 333566888888888899999988543
No 122
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=62.08 E-value=36 Score=28.40 Aligned_cols=125 Identities=10% Similarity=0.042 Sum_probs=69.4
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+-+|||.=.-...+ ..| +..++=||. |++++.-++.+...+. .+++++..|+.. +.+.+....||
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~--~~~~~~~~~~D--- 113 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV---PNIKLLWVDGSD--LTDYFEDGEID--- 113 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC---SSEEEEECCSSC--GGGTSCTTCCS---
T ss_pred CeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC---CCEEEEeCCHHH--HHhhcCCCCCC---
Confidence 57999999966544444 233 456666665 5555544444444432 368888888763 22112111122
Q ss_pred CEEEEEcCC-CCCCHH------HHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 190 PSVWAIQGL-PVMTLA------SFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 190 Ptl~i~EGv-~YL~~~------~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
.+++. .. .+.... ....+++.+.++..||+.+++...... -..++.+.|.++||...
T Consensus 114 -~i~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 114 -RLYLN-FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG----------LFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp -EEEEE-SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH----------HHHHHHHHHHHHTCEEE
T ss_pred -EEEEE-CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH----------HHHHHHHHHHHCCCeee
Confidence 33333 22 232211 135688888888888888877542110 12345577888999863
No 123
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=61.18 E-value=63 Score=26.47 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=55.7
Q ss_pred CceEEEeCCCCCCcccccCCCCCc-EEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTST-IIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~-~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||.=.-...+ +. .++=+|. |++++.-++.+ .+.+++..|+..-. +..+.
T Consensus 37 ~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~---------~~~~~ 95 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALP---------FPGES 95 (211)
T ss_dssp CSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCC---------SCSSC
T ss_pred CCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCC---------CCCCc
Confidence 358999999976544444 23 5666676 44444333322 15667777765211 22223
Q ss_pred CEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 190 PSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 190 Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
--++++-+++ +++ +...+|+.+.++..||+.+++..
T Consensus 96 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 96 FDVVLLFTTLEFVE--DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp EEEEEEESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEcChhhhcC--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 3456666664 665 34678888888888888877654
No 124
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=60.90 E-value=5.8 Score=34.41 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=59.0
Q ss_pred eEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 114 QVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 114 QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
.|+-+|||.=.-...| ..+.+.+++=||. |+.++.-++.++..+.. +++++++..|.. ++...+....||
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~~i~~~~gda~--~~l~~~~~~~fD---- 131 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS-PSRVRFLLSRPL--DVMSRLANDSYQ---- 131 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHH--HHGGGSCTTCEE----
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cCcEEEEEcCHH--HHHHHhcCCCcC----
Confidence 8999999754333333 2343556677775 55666656666665432 135666665542 222222122344
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchh
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAW 230 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~ 230 (317)
++++-+. ......+++.+.++..||+.+++|-..|
T Consensus 132 -~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 132 -LVFGQVS----PMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp -EEEECCC----TTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred -eEEEcCc----HHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 4444443 2233457777888888999999986543
No 125
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=60.81 E-value=26 Score=28.61 Aligned_cols=119 Identities=10% Similarity=0.070 Sum_probs=56.8
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh-----c
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA-----K 183 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~-----~ 183 (317)
...|+-+|||-=.-...+ ..+ +.+++=+|. |.+++.-++.+...+ . .+.+-..|+.+.+.. .
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~------~---~~~~~~~d~~~~~~~~~~~~~ 100 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFG------A---VVDWAAADGIEWLIERAERGR 100 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC----------------------------CCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhC------C---ceEEEEcchHhhhhhhhhccC
Confidence 468999999977654444 233 456666666 445443333333221 0 233333444444443 3
Q ss_pred CCCCCCCEEEEEcCCCCCCHHH--------------------------HHHHHHHHHhccCCCcE-EEEeCchhhhhhhc
Q 021091 184 GFNGNRPSVWAIQGLPVMTLAS--------------------------FEDVLLLVGSLAMNKCL-FLGELPAWLAETEF 236 (317)
Q Consensus 184 Gfd~~~Ptl~i~EGv~YL~~~~--------------------------v~~Ll~~ia~ls~~gS~-l~~d~~~~~~~~~~ 236 (317)
.|| ++++- .+|..... ...+++.+.++..||+. ++++.+..
T Consensus 101 ~fD-----~i~~n-pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------ 168 (215)
T 4dzr_A 101 PWH-----AIVSN-PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN------ 168 (215)
T ss_dssp CBS-----EEEEC-CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS------
T ss_pred ccc-----EEEEC-CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc------
Confidence 444 44441 12322111 16777888888888888 88876521
Q ss_pred CCCCcchHHHHHHHH--hCCCee
Q 021091 237 GNKSTTEKWMDKLFM--SNGFGV 257 (317)
Q Consensus 237 ~~~~~~~~w~~~~l~--~~Gw~~ 257 (317)
....+.+++. +.||..
T Consensus 169 -----~~~~~~~~l~~~~~gf~~ 186 (215)
T 4dzr_A 169 -----QADEVARLFAPWRERGFR 186 (215)
T ss_dssp -----CHHHHHHHTGGGGGGTEE
T ss_pred -----cHHHHHHHHHHhhcCCce
Confidence 1222456677 788863
No 126
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=57.97 E-value=7.1 Score=35.96 Aligned_cols=95 Identities=12% Similarity=0.126 Sum_probs=62.9
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...|+-+|||.=.-...+ ..| +.+++-+|.|++++.-+ + .+ +++++..|+.. .+. +||
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~----~----~~-~v~~~~~d~~~-~~p------~~D-- 248 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFP-KLKCIVFDRPQVVENLS----G----SN-NLTYVGGDMFT-SIP------NAD-- 248 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEECHHHHTTCC----C----BT-TEEEEECCTTT-CCC------CCS--
T ss_pred cCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeCHHHHhhcc----c----CC-CcEEEeccccC-CCC------Ccc--
Confidence 4568999999976555444 244 46777888887765311 1 12 57888888753 221 244
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCC---CcEE-EEeC
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMN---KCLF-LGEL 227 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~---gS~l-~~d~ 227 (317)
++++-.+ .+++.++...+|+.+.+...| |+.+ +.|.
T Consensus 249 ---~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 249 ---AVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred ---EEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 4555555 578888888999999998888 7764 5564
No 127
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=57.75 E-value=22 Score=34.77 Aligned_cols=121 Identities=7% Similarity=0.032 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCC
Q 021091 93 LTTKFIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLE 172 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld 172 (317)
.|+..+-+.+.+.+...+ ...|+-+|||-=.-+..+...+..+++=||..++++.-++.+...+. .++++++..|+.
T Consensus 141 ~~t~~~~~~il~~l~~~~-~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl--~~~v~~~~~d~~ 217 (480)
T 3b3j_A 141 VRTGTYQRAILQNHTDFK-DKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNL--TDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHHHHTGGGTT-TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTC--TTTEEEEESCTT
T ss_pred HhHHHHHHHHHHhhhhcC-CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCC--CCcEEEEECchh
Confidence 344444444444443222 35899999997655544422223567777776666555555665542 246888888876
Q ss_pred CchHHHHHHhcCCCCCCCEEEEEcCCCC-CCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 173 SSNIQQALRAKGFNGNRPSVWAIQGLPV-MTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 173 ~~dw~~~L~~~Gfd~~~Ptl~i~EGv~Y-L~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.-. + ++.--+++++++.| +..+.....+..+.++..||+.++.+
T Consensus 218 ~~~---------~-~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVS---------L-PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCC---------C-SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCc---------c-CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 311 1 12345778877745 44455555666777777888888754
No 128
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=57.34 E-value=85 Score=27.70 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=64.3
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech--hhhHHHHHHHH-----hhcCCC--CCCcceEEeecCCC--chHHHHHH
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP--ERIFKISAEKL-----EGVGAK--IPRSCLFLHVPLES--SNIQQALR 181 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~--P~v~~~K~~~L-----~~~~~~--~p~~~~~v~vdld~--~dw~~~L~ 181 (317)
..|+-||||.=.-..-+......+++=+|. |++++.-++.. +..+.. ...+++++..+... .++...+.
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 589999999654333332111236777776 56665544444 222111 00245555555431 22222222
Q ss_pred hcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccC---C--CcEEE--EeCch-hhhhhhcCCCCcchHHHHHHHHhC
Q 021091 182 AKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAM---N--KCLFL--GELPA-WLAETEFGNKSTTEKWMDKLFMSN 253 (317)
Q Consensus 182 ~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~---~--gS~l~--~d~~~-~~~~~~~~~~~~~~~w~~~~l~~~ 253 (317)
...|| ++++-.++|. .+....+++.+.++.. | |+.++ +.... +.. ..... ..+.+.++
T Consensus 161 ~~~fD-----~Ii~~dvl~~-~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~-------~~~~~-~~~~l~~~ 226 (281)
T 3bzb_A 161 LQRFQ-----VVLLADLLSF-HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLA-------ERDLA-FFRLVNAD 226 (281)
T ss_dssp CSSBS-----EEEEESCCSC-GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC---------------CTH-HHHHHHHS
T ss_pred CCCCC-----EEEEeCcccC-hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccc-------hhHHH-HHHHHHhc
Confidence 22343 4455444454 4456788899998877 7 77643 33211 110 00112 23467889
Q ss_pred C-Ceee
Q 021091 254 G-FGVG 258 (317)
Q Consensus 254 G-w~~~ 258 (317)
| |.++
T Consensus 227 G~f~v~ 232 (281)
T 3bzb_A 227 GALIAE 232 (281)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 9 9975
No 129
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=56.09 E-value=52 Score=27.98 Aligned_cols=109 Identities=10% Similarity=0.062 Sum_probs=59.8
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh-------
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA------- 182 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~------- 182 (317)
..|+.+|||.=.-...+ ..+.+.+++=+|. |+.++.-++.+...+. +.++.++..|+. ++...+..
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~--~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSAL--ETLQVLIDSKSAPSW 137 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH--HHHHHHHHCSSCCGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHH--HHHHHHHhhcccccc
Confidence 58999999853322222 2333456666665 5666665566665442 124666666543 22233321
Q ss_pred -cCCCC--CCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 183 -KGFNG--NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 183 -~Gfd~--~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
.+|.. +.--++++-+. .+....+++.+.++..||+.++++...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred cccccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 12322 22234444332 344557788888888899998887543
No 130
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=55.28 E-value=6.8 Score=32.92 Aligned_cols=102 Identities=13% Similarity=0.042 Sum_probs=55.1
Q ss_pred CceEEEeCCCCC--CcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMD--TRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLD--TRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.= |..+--..+.+.+++=+|. |++++.-++.++..+. ..+++++..|.. +.+.. .+ +
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-----~~~~~--~~-~ 126 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPL-----GIAAG--QR-D 126 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHH-----HHHTT--CC-S
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHH-----HHhcc--CC-C
Confidence 358999999754 4333222332456666665 5565554555554432 124556655532 22221 11 1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
--++++-+- ......+++.+.++..||+.++++-.
T Consensus 127 -fD~v~~~~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 127 -IDILFMDCD----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp -EEEEEEETT----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred -CCEEEEcCC----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 223333322 23446788888888889999888743
No 131
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=54.87 E-value=65 Score=26.81 Aligned_cols=121 Identities=12% Similarity=0.023 Sum_probs=66.1
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
...|+-+|||.=.-...+.. . ..+|++.. +++.-++. +..++..|+.... +..+.--
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~--~-~~vD~s~~-~~~~a~~~----------~~~~~~~d~~~~~---------~~~~~fD 104 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI--K-IGVEPSER-MAEIARKR----------GVFVLKGTAENLP---------LKDESFD 104 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC--C-EEEESCHH-HHHHHHHT----------TCEEEECBTTBCC---------SCTTCEE
T ss_pred CCcEEEeCCCCCHHHHHHHH--H-hccCCCHH-HHHHHHhc----------CCEEEEcccccCC---------CCCCCee
Confidence 45899999997665555532 1 44444433 33321111 3566777765211 1122334
Q ss_pred EEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchh---hhhhh----cC------CCCcchHHHHHHHHhCCCee
Q 021091 192 VWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAW---LAETE----FG------NKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 192 l~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~---~~~~~----~~------~~~~~~~w~~~~l~~~Gw~~ 257 (317)
++++-+++ +++ +...+|+.+.+...||+.+++..+.. ..... .+ ....+...+.++|.++||++
T Consensus 105 ~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 105 FALMVTTICFVD--DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp EEEEESCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred EEEEcchHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 56666664 663 34578888888888888877653221 00000 00 11123444568899999996
No 132
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=54.02 E-value=68 Score=26.44 Aligned_cols=106 Identities=8% Similarity=-0.036 Sum_probs=60.8
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
...|+-+|||.=.-...+. ..++=+|..+. +.+++..|+.... +..+.--
T Consensus 68 ~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~-----------------~~~~~~~d~~~~~---------~~~~~fD 117 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR----NPVHCFDLASL-----------------DPRVTVCDMAQVP---------LEDESVD 117 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC----SCEEEEESSCS-----------------STTEEESCTTSCS---------CCTTCEE
T ss_pred CCeEEEECCcCCHHHHHhh----ccEEEEeCCCC-----------------CceEEEeccccCC---------CCCCCEe
Confidence 3579999999765554442 23444444322 2445666655311 2222334
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEE-eCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 192 VWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLG-ELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 192 l~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~-d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
++++-.++.. .+...+|+.+.++..||+.+++ +..... .+...+.++|.++||.+.
T Consensus 118 ~v~~~~~l~~--~~~~~~l~~~~~~L~~gG~l~i~~~~~~~---------~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 118 VAVFCLSLMG--TNIRDFLEEANRVLKPGGLLKVAEVSSRF---------EDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp EEEEESCCCS--SCHHHHHHHHHHHEEEEEEEEEEECGGGC---------SCHHHHHHHHHHTTEEEE
T ss_pred EEEEehhccc--cCHHHHHHHHHHhCCCCeEEEEEEcCCCC---------CCHHHHHHHHHHCCCEEE
Confidence 5555555432 4567788888888878887665 543210 123345678899999964
No 133
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=52.80 E-value=33 Score=31.39 Aligned_cols=95 Identities=8% Similarity=-0.008 Sum_probs=62.2
Q ss_pred CCceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
+...||-+|||.=.-...+ ..| +.+++-+|.|++++.-+ ..+ +++++..|+.. .+. .||
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~--------~~~-~v~~~~~d~~~-~~~------~~D-- 253 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQPQVVGNLT--------GNE-NLNFVGGDMFK-SIP------SAD-- 253 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEECHHHHSSCC--------CCS-SEEEEECCTTT-CCC------CCS--
T ss_pred CCCEEEEECCCcCHHHHHHHHHCC-CCeEEEeccHHHHhhcc--------cCC-CcEEEeCccCC-CCC------Cce--
Confidence 3468999999976544444 244 46777778887764211 112 57888888763 221 233
Q ss_pred CCEEEEEcCC-CCCCHHHHHHHHHHHHhccCC---CcEE-EEeC
Q 021091 189 RPSVWAIQGL-PVMTLASFEDVLLLVGSLAMN---KCLF-LGEL 227 (317)
Q Consensus 189 ~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~---gS~l-~~d~ 227 (317)
++++-.+ .+++.++...+|+.+.+...| |+.+ +.|.
T Consensus 254 ---~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 254 ---AVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp ---EEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred ---EEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 4555555 468888888999999998888 8865 4564
No 134
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=52.29 E-value=31 Score=27.83 Aligned_cols=101 Identities=12% Similarity=0.019 Sum_probs=55.7
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+-+|||.=.-...+... +.+++=||. |++++.-++.++..+. .+++++..+.. ++... ....||
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~--~l~~~-~~~~fD----- 91 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHE--NLDHY-VREPIR----- 91 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGG--GGGGT-CCSCEE-----
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHH--HHHhh-ccCCcC-----
Confidence 58999999976544445322 466777775 6666665566665542 25676664332 22111 111232
Q ss_pred EEEEcCCCCCC---------HHHHHHHHHHHHhccCCCcEEEEe
Q 021091 192 VWAIQGLPVMT---------LASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 192 l~i~EGv~YL~---------~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
++++- +.|++ .+.....|+.+.+...||+.+++-
T Consensus 92 ~v~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 92 AAIFN-LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp EEEEE-EC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEe-CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 23222 12443 366677888888877788876543
No 135
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=49.07 E-value=41 Score=28.45 Aligned_cols=101 Identities=14% Similarity=0.228 Sum_probs=58.1
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHH-hcCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALR-AKGFNGN 188 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~-~~Gfd~~ 188 (317)
..|+.+|||.=.-...+ ..| +.+++=+|. |+.++.-++.+...+. ..+++++..|+. ++...+. ...||
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~~~~~~~fD-- 128 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDAL--QLGEKLELYPLFD-- 128 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGG--GSHHHHTTSCCEE--
T ss_pred CEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHH--HHHHhcccCCCcc--
Confidence 58999999954333333 233 456777776 5666655555665542 125667666654 2222221 12233
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
++++-+. .+....+++.+.++..||+.++++-
T Consensus 129 ---~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 129 ---VLFIDAA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp ---EEEEEGG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred ---EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 3443333 1245678888888888999888874
No 136
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=47.92 E-value=29 Score=27.86 Aligned_cols=107 Identities=9% Similarity=-0.019 Sum_probs=55.1
Q ss_pred CceEEEeCCCCCCccccc-CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL-~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+-+|||.=.-...+ ..+ ...++=+|. |++++.-++.+...+. +.+++++..|+. ++...+.. ....
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~--~~~~~~~~---~~~~ 116 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE--PEKFEVRKMDAN--RALEQFYE---EKLQ 116 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHH--HHHHHHHH---TTCC
T ss_pred CCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC--CcceEEEECcHH--HHHHHHHh---cCCC
Confidence 358999999965543333 222 245555555 5555554444554431 125677776654 33333321 1122
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHH--HhccCCCcEEEEeCc
Q 021091 190 PSVWAIQGLPVMTLASFEDVLLLV--GSLAMNKCLFLGELP 228 (317)
Q Consensus 190 Ptl~i~EGv~YL~~~~v~~Ll~~i--a~ls~~gS~l~~d~~ 228 (317)
--++++-.. |. .......++.+ .++..||+.+++..+
T Consensus 117 fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 117 FDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 345555444 43 12233444555 555568888887754
No 137
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=47.78 E-value=1.2e+02 Score=29.63 Aligned_cols=104 Identities=10% Similarity=0.003 Sum_probs=60.5
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEechh-hhHHHHHHH-------HhhcCCCCCCcceEEeecCCCchHHHHHH
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISPE-RIFKISAEK-------LEGVGAKIPRSCLFLHVPLESSNIQQALR 181 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~P-~v~~~K~~~-------L~~~~~~~p~~~~~v~vdld~~dw~~~L~ 181 (317)
...|+-||||.=.-...+. .+. ..++=||.- ++++.-++. .+..+.. ..++.++..|+....+.+.+.
T Consensus 174 gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 174 DDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp TCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCccccccC
Confidence 3589999999886665553 222 247777763 343332221 2223221 137889999987544433222
Q ss_pred hcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 182 AKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 182 ~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.-+++++..+ |+.++ ....|..+.+...||+.|+.-
T Consensus 252 -------~aDVVf~Nn~-~F~pd-l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 252 -------NTSVIFVNNF-AFGPE-VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp -------TCSEEEECCT-TCCHH-HHHHHHHHHTTSCTTCEEEES
T ss_pred -------CccEEEEccc-ccCch-HHHHHHHHHHcCCCCcEEEEe
Confidence 2356666555 66654 455556677777889987653
No 138
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=47.07 E-value=1.2e+02 Score=26.35 Aligned_cols=133 Identities=8% Similarity=-0.052 Sum_probs=75.8
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhh---------cCC-----CCCCcceEEeecCCCchHH
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEG---------VGA-----KIPRSCLFLHVPLESSNIQ 177 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~---------~~~-----~~p~~~~~v~vdld~~dw~ 177 (317)
..|+.+|||-=.-...|... +..|+=||. |.+++.-++.... .+. ....+++++..|+..-..
T Consensus 70 ~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~- 147 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR- 147 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG-
T ss_pred CeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc-
Confidence 57999999976555555322 568889997 4555532222210 000 001257888888763211
Q ss_pred HHHHh-cCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEE---EeCchhhhhhhcCCCCcchHHHHHHHHh
Q 021091 178 QALRA-KGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFL---GELPAWLAETEFGNKSTTEKWMDKLFMS 252 (317)
Q Consensus 178 ~~L~~-~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~---~d~~~~~~~~~~~~~~~~~~w~~~~l~~ 252 (317)
.. ..|| +++.-++ .+++.++...+++.+.++..||+.++ +.+.... .....-..+...+.++|..
T Consensus 148 ---~~~~~FD-----~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~--~~g~~~~~~~~el~~~l~~ 217 (252)
T 2gb4_A 148 ---ANIGKFD-----RIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK--HAGPPFYVPSAELKRLFGT 217 (252)
T ss_dssp ---GCCCCEE-----EEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS--CCCSSCCCCHHHHHHHHTT
T ss_pred ---ccCCCEE-----EEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc--CCCCCCCCCHHHHHHHhhC
Confidence 10 1243 5666677 47888888889999999888988864 3332110 0000011234456677776
Q ss_pred CCCeee
Q 021091 253 NGFGVG 258 (317)
Q Consensus 253 ~Gw~~~ 258 (317)
+|++.
T Consensus 218 -~f~v~ 222 (252)
T 2gb4_A 218 -KCSMQ 222 (252)
T ss_dssp -TEEEE
T ss_pred -CeEEE
Confidence 69864
No 139
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=46.30 E-value=64 Score=25.40 Aligned_cols=92 Identities=16% Similarity=-0.027 Sum_probs=54.3
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+.... ..++=+|. |++++.-++. . .+++++..| + .+..+.-
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~---~-----~~v~~~~~d---------~---~~~~~~~ 76 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK---F-----DSVITLSDP---------K---EIPDNSV 76 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH---C-----TTSEEESSG---------G---GSCTTCE
T ss_pred CCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh---C-----CCcEEEeCC---------C---CCCCCce
Confidence 4589999999876666553221 26666776 4454433332 1 256666655 0 1222334
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 191 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 191 tl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
-++++-.++ +++ +...+++.+.+...||+.+++.
T Consensus 77 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 77 DFILFANSFHDMD--DKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp EEEEEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEccchhccc--CHHHHHHHHHHhcCCCCEEEEE
Confidence 455565664 563 3467888888888788776543
No 140
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=44.27 E-value=92 Score=25.45 Aligned_cols=127 Identities=11% Similarity=0.043 Sum_probs=69.9
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.-.-...+... +.+++=+|. |++++.-+ +. ..+++..|+..... .+..+.-
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~----~~------~~~~~~~d~~~~~~-------~~~~~~f 94 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAK----EK------LDHVVLGDIETMDM-------PYEEEQF 94 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHH----TT------SSEEEESCTTTCCC-------CSCTTCE
T ss_pred CCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH----Hh------CCcEEEcchhhcCC-------CCCCCcc
Confidence 358999999986655455322 356666666 33433211 11 12456666652111 1222333
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEeCchhhh-----hhh-c-------C------CCCcchHHHHHHH
Q 021091 191 SVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGELPAWLA-----ETE-F-------G------NKSTTEKWMDKLF 250 (317)
Q Consensus 191 tl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~-----~~~-~-------~------~~~~~~~w~~~~l 250 (317)
-++++-+++ +++.. ..+++.+.+...||+.+++..+.... ... . + ....+...+.++|
T Consensus 95 D~v~~~~~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 172 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMF 172 (230)
T ss_dssp EEEEEESCGGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHH
T ss_pred CEEEECChhhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHH
Confidence 566666664 56432 57888899988888888776542110 000 0 0 0112344456889
Q ss_pred HhCCCeee
Q 021091 251 MSNGFGVG 258 (317)
Q Consensus 251 ~~~Gw~~~ 258 (317)
.++||++.
T Consensus 173 ~~~Gf~~~ 180 (230)
T 3cc8_A 173 LKAGYSIS 180 (230)
T ss_dssp HHTTEEEE
T ss_pred HHcCCeEE
Confidence 99999963
No 141
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=44.16 E-value=1.3e+02 Score=24.67 Aligned_cols=131 Identities=17% Similarity=0.201 Sum_probs=69.1
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHH-HHHH---HhhcCCCCCCcceEEeecCCCchHHHHHHhcC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKI-SAEK---LEGVGAKIPRSCLFLHVPLESSNIQQALRAKG 184 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~-K~~~---L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~G 184 (317)
...|+-+|||.=.-...|. .| +.+++=||. |++++. .+.. ....+ . .+++++..|+..-.
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~--~-~~v~~~~~d~~~l~--------- 94 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGG--L-PNLLYLWATAERLP--------- 94 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTC--C-TTEEEEECCSTTCC---------
T ss_pred CCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcC--C-CceEEEecchhhCC---------
Confidence 3589999999876555552 33 467777787 444442 1111 11221 1 26788888876311
Q ss_pred CCCCCCEEEEEcCCC-CCCH--HHH---HHHHHHHHhccCCCcEEEEeCc--hhhhhhh--cCCCCcchHH----HHHHH
Q 021091 185 FNGNRPSVWAIQGLP-VMTL--ASF---EDVLLLVGSLAMNKCLFLGELP--AWLAETE--FGNKSTTEKW----MDKLF 250 (317)
Q Consensus 185 fd~~~Ptl~i~EGv~-YL~~--~~v---~~Ll~~ia~ls~~gS~l~~d~~--~~~~~~~--~~~~~~~~~w----~~~~l 250 (317)
+..+. -.+. .++ +... ..+ ..+|+.+.+...||+.+++.+. .|..... .........| +...|
T Consensus 95 ~~~~~-d~v~--~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 171 (218)
T 3mq2_A 95 PLSGV-GELH--VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRY 171 (218)
T ss_dssp SCCCE-EEEE--EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHH
T ss_pred CCCCC-CEEE--EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHH
Confidence 21112 2222 112 2111 112 6788899998889998887642 1111100 1111122222 45689
Q ss_pred HhCCCeee
Q 021091 251 MSNGFGVG 258 (317)
Q Consensus 251 ~~~Gw~~~ 258 (317)
.+.||++.
T Consensus 172 ~~aGf~i~ 179 (218)
T 3mq2_A 172 AEAGWKLA 179 (218)
T ss_dssp HHTTEEEE
T ss_pred HHcCCCce
Confidence 99999973
No 142
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=43.48 E-value=1.3e+02 Score=25.91 Aligned_cols=107 Identities=8% Similarity=-0.034 Sum_probs=57.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCC-------------chHH
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES-------------SNIQ 177 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~-------------~dw~ 177 (317)
.+.|+.+|+|+.|-.+-. .+ +.+++-||. |+..+.-++.+++.+....++.+++..|... +.|.
T Consensus 31 a~~VLEiGtGySTl~lA~-~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGSGGSTVVAAE-LP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESCSHHHHHHHT-ST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECchHHHHHHHH-cC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 468999999998865432 22 344555554 3444444566777653112467788877542 1232
Q ss_pred HHHH---hcCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 178 QALR---AKGFNGNRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 178 ~~L~---~~Gfd~~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
+... ... .....=+++..|=-. +.-+...+ .+..+|+.|++|-
T Consensus 109 ~~~~~i~~~~-~~~~fDlIfIDg~k~-----~~~~~~~l-~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 109 DYPLAVWRTE-GFRHPDVVLVDGRFR-----VGCALATA-FSITRPVTLLFDD 154 (202)
T ss_dssp HHHHGGGGCT-TCCCCSEEEECSSSH-----HHHHHHHH-HHCSSCEEEEETT
T ss_pred HHhhhhhccc-cCCCCCEEEEeCCCc-----hhHHHHHH-HhcCCCeEEEEeC
Confidence 2211 110 113355777777411 12222233 4556899999985
No 143
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=43.43 E-value=93 Score=25.88 Aligned_cols=126 Identities=9% Similarity=-0.065 Sum_probs=65.9
Q ss_pred CceEEEeCCC-CCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCC-chHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDG-MDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES-SNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAG-LDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~-~dw~~~L~~~Gfd~~ 188 (317)
...|+-+||| -=.-...+....+..++=+|. |++++.-++.+...+. +++++..|+.. ..+ ...
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~v~~~~~d~~~~~~~---------~~~ 122 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS----NVRLVKSNGGIIKGV---------VEG 122 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC----CCEEEECSSCSSTTT---------CCS
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC----CcEEEeCCchhhhhc---------ccC
Confidence 3589999999 443333331100234454554 4445444444454431 57778777641 111 112
Q ss_pred CCEEEEEcCCCCCCHH-------------------HHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHH
Q 021091 189 RPSVWAIQGLPVMTLA-------------------SFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKL 249 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~-------------------~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~ 249 (317)
.--++++- .+|.... ....+++.+.++..||+.+++-.+... .......++
T Consensus 123 ~fD~I~~n-pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~~~ 192 (230)
T 3evz_A 123 TFDVIFSA-PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------KLLNVIKER 192 (230)
T ss_dssp CEEEEEEC-CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------HHHHHHHHH
T ss_pred ceeEEEEC-CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------hHHHHHHHH
Confidence 22334432 1354322 247789999998888888877543211 011224577
Q ss_pred HHhCCCeeeec
Q 021091 250 FMSNGFGVGMV 260 (317)
Q Consensus 250 l~~~Gw~~~~~ 260 (317)
+.++||.++..
T Consensus 193 l~~~g~~~~~~ 203 (230)
T 3evz_A 193 GIKLGYSVKDI 203 (230)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHcCCceEEE
Confidence 88999987543
No 144
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=43.26 E-value=1.2e+02 Score=23.80 Aligned_cols=119 Identities=9% Similarity=-0.063 Sum_probs=65.8
Q ss_pred CceEEEeCCCCCCccccc-CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHh--cCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL-NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRA--KGFNG 187 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL-~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~--~Gfd~ 187 (317)
...|+.+|||.=.-...+ ...++.+++=+|. |++++.-++.+...+. +.+. .+..|.. +. +.. ..||
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~-~~~~d~~-~~----~~~~~~~~D- 96 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV--SDRI-AVQQGAP-RA----FDDVPDNPD- 96 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC--TTSE-EEECCTT-GG----GGGCCSCCS-
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC--CCCE-EEecchH-hh----hhccCCCCC-
Confidence 358999999975444433 2212567778887 5566655555555432 2245 5555543 12 222 2233
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 188 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 188 ~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
++++-+.++. ..+++.+.+...||+.+++...... .......++..+|+.+.
T Consensus 97 ----~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 97 ----VIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAVTVE----------SEQMLWALRKQFGGTIS 148 (178)
T ss_dssp ----EEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEECSHH----------HHHHHHHHHHHHCCEEE
T ss_pred ----EEEECCcccH-----HHHHHHHHHhcCCCCEEEEEeeccc----------cHHHHHHHHHHcCCeeE
Confidence 4454444322 5677788888888888877643210 11123456777787753
No 145
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=42.74 E-value=1e+02 Score=27.43 Aligned_cols=102 Identities=14% Similarity=0.006 Sum_probs=55.8
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-||||.=.-...|... +..+.=||. |++++.-++.+... ..+....+++.+ ....+ ...||
T Consensus 46 g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~-~~~~~-~~~fD---- 112 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAE-IPKEL-AGHFD---- 112 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSC-CCGGG-TTCCS----
T ss_pred cCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeecccc-ccccc-CCCcc----
Confidence 358999999975544444221 345666665 55665444433321 111111122210 00011 11244
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
.++....+.++..++...+++.+.++. ||..+++.+
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 444444445788888899999999988 888877654
No 146
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=41.23 E-value=55 Score=26.16 Aligned_cols=115 Identities=10% Similarity=0.023 Sum_probs=62.7
Q ss_pred ceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCCE
Q 021091 113 KQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRPS 191 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~Pt 191 (317)
..|+.+|||. + . +|. +++++.-++... .+.+++..|+.. +. ..++..+.--
T Consensus 14 ~~vL~~~~g~------------v--~-vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~--~~----~~~~~~~~fD 65 (176)
T 2ld4_A 14 QFVAVVWDKS------------S--P-VEALKGLVDKLQALTG-------NEGRVSVENIKQ--LL----QSAHKESSFD 65 (176)
T ss_dssp SEEEEEECTT------------S--C-HHHHHHHHHHHHHHTT-------TTSEEEEEEGGG--GG----GGCCCSSCEE
T ss_pred CEEEEecCCc------------e--e-eeCCHHHHHHHHHhcc-------cCcEEEEechhc--Cc----cccCCCCCEe
Confidence 5788899984 1 1 776 455554333322 146777777752 21 1122223334
Q ss_pred EEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCeee
Q 021091 192 VWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGVG 258 (317)
Q Consensus 192 l~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~~ 258 (317)
++++-.+ .|+++ +...+|+.+.+...||+.+++..+.... ........+.....+.|.++|| ++
T Consensus 66 ~V~~~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 66 IILSGLVPGSTTL-HSAEILAEIARILRPGGCLFLKEPVETA-VDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp EEEECCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEEEEEESS-SCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred EEEECChhhhccc-CHHHHHHHHHHHCCCCEEEEEEcccccc-cccccccCCHHHHHHHHHHCCC-cE
Confidence 5555445 57722 2377899999988899988875431100 0000111122224578899999 64
No 147
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=41.02 E-value=30 Score=32.12 Aligned_cols=40 Identities=15% Similarity=0.364 Sum_probs=25.4
Q ss_pred eEEEeCCCCCCccccc-C-CCC-CcEEEEechhhhHHHHHHHHh
Q 021091 114 QVVLLTDGMDTRPYRL-N-WPT-STIIFDISPERIFKISAEKLE 154 (317)
Q Consensus 114 QVV~LGAGLDTRa~RL-~-~~~-~~~~fEVD~P~v~~~K~~~L~ 154 (317)
.|+.||||-=+-.-.+ . +|. .++.+|+| |++++.-++.+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEid-p~vi~~Ar~~~~ 134 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELD-AELARLSREWFD 134 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESC-HHHHHHHHHHSC
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECC-HHHHHHHHHhcc
Confidence 8999999976544444 2 343 46667777 456666555554
No 148
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=39.67 E-value=89 Score=24.76 Aligned_cols=105 Identities=10% Similarity=0.034 Sum_probs=56.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||.=.-...+...+...++=+|. |++++.-++.++..+. +.+++++..|+. +.+... + +.-
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~-----~~~~~~--~-~~f 101 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA--ENRFTLLKMEAE-----RAIDCL--T-GRF 101 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC--GGGEEEECSCHH-----HHHHHB--C-SCE
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcHH-----HhHHhh--c-CCC
Confidence 3589999999765544442112346677776 5565554454554321 124555555442 222221 1 122
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHH--hccCCCcEEEEeCc
Q 021091 191 SVWAIQGLPVMTLASFEDVLLLVG--SLAMNKCLFLGELP 228 (317)
Q Consensus 191 tl~i~EGv~YL~~~~v~~Ll~~ia--~ls~~gS~l~~d~~ 228 (317)
-++++-.. |. ......+++.+. +...||+.+++...
T Consensus 102 D~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 102 DLVFLDPP-YA-KETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp EEEEECCS-SH-HHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCC-CC-cchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 35555433 42 344566677776 66678888887753
No 149
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=36.37 E-value=46 Score=28.44 Aligned_cols=105 Identities=11% Similarity=-0.008 Sum_probs=57.8
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+. .| +..++=||. |++++.-++.....+ . .+++++..|+. ++.... +..+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~--l-~nv~~~~~Da~--~~l~~~----~~~~ 104 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEG--L-SNLRVMCHDAV--EVLHKM----IPDN 104 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTT--C-SSEEEECSCHH--HHHHHH----SCTT
T ss_pred CCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhC--C-CcEEEEECCHH--HHHHHH----cCCC
Confidence 3589999999876555552 33 466777775 455544344444443 1 25777666653 322221 2222
Q ss_pred CC-EEEEEcCCCCCCHHHHH------HHHHHHHhccCCCcEEEEe
Q 021091 189 RP-SVWAIQGLPVMTLASFE------DVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 189 ~P-tl~i~EGv~YL~~~~v~------~Ll~~ia~ls~~gS~l~~d 226 (317)
.- .+++.-..+|....... .+++.+.+...||+.+.+.
T Consensus 105 ~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 105 SLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp CEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred ChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 22 33333222444333322 4888898887888887664
No 150
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=36.21 E-value=73 Score=25.82 Aligned_cols=103 Identities=11% Similarity=0.008 Sum_probs=57.9
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+-+|||.=.-...+. ..+...++=+|. |++++.-++.++..+. ..+++++..|+. ++... .++.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~--~~~~~------~~~~ 93 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL--IDRVTLIKDGHQ--NMDKY------IDCP 93 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC--GGGEEEECSCGG--GGGGT------CCSC
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHH--HHhhh------ccCC
Confidence 489999999865444442 112346777776 5566655555555432 136777777764 22111 1122
Q ss_pred CEEEEEcCCCCCC---------HHHHHHHHHHHHhccCCCcEEEEe
Q 021091 190 PSVWAIQGLPVMT---------LASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 190 Ptl~i~EGv~YL~---------~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
--++++-. .|++ .+....+++.+.++..||+.+++-
T Consensus 94 fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 94 VKAVMFNL-GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp EEEEEEEE-SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEcC-CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 23333322 2332 345567888888888788876654
No 151
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=35.52 E-value=1.8e+02 Score=26.05 Aligned_cols=108 Identities=11% Similarity=0.041 Sum_probs=49.7
Q ss_pred CCCceEEEeCCCCCCccccc-CCCC--CcEEEEechhhhHHHHHHHHhhcCC--CCCCcceEEeecCCCchHHHHHHhcC
Q 021091 110 DGLKQVVLLTDGMDTRPYRL-NWPT--STIIFDISPERIFKISAEKLEGVGA--KIPRSCLFLHVPLESSNIQQALRAKG 184 (317)
Q Consensus 110 ~g~~QVV~LGAGLDTRa~RL-~~~~--~~~~fEVD~P~v~~~K~~~L~~~~~--~~p~~~~~v~vdld~~dw~~~L~~~G 184 (317)
+....|+.||||-=.-+.-+ ..++ .++.+|+| |++++.-++.++..+. -...+++++..|.. ++... .
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid-~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~--~~l~~---~- 154 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEID-AGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV--NFVNQ---T- 154 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSC-TTHHHHHHHHCHHHHSSCTTCTTCCEECSCSC--C---C---C-
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECC-HHHHHHHHHhhhhcccccccCCceEEEEChHH--HHHhh---c-
Confidence 44578999999976544333 2322 35556665 4566655555554310 01125666666643 22111 0
Q ss_pred CCCCCCEEEEEcCC-CCCCHHHH--HHHHHHHHhccCCCcEEEEe
Q 021091 185 FNGNRPSVWAIQGL-PVMTLASF--EDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 185 fd~~~Ptl~i~EGv-~YL~~~~v--~~Ll~~ia~ls~~gS~l~~d 226 (317)
.+.--++++-.. .+-..... ..+++.+.+...||+.++..
T Consensus 155 --~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 155 --SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp --CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred --CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 112224444333 22222221 45666666666666666654
No 152
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=33.60 E-value=75 Score=29.44 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=64.3
Q ss_pred ceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhhc-----CCCCCCcceEEeecCCCchHHHHHHhcC
Q 021091 113 KQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEGV-----GAKIPRSCLFLHVPLESSNIQQALRAKG 184 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~~-----~~~~p~~~~~v~vdld~~dw~~~L~~~G 184 (317)
..|+-+|||.=.-...|. .+++..++=+|. |++++.-++.++.. +...+.+++++..|+..-. .+...+
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~---~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA---TAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG---GCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh---hcccCC
Confidence 589999999865444442 123457777777 55665544444332 2111237888888876311 011113
Q ss_pred CCCCCCEEEEEcCCC-CCCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 185 FNGNRPSVWAIQGLP-VMTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 185 fd~~~Ptl~i~EGv~-YL~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
+..+.--++++-+++ +++. ...+|+.+.++..||+.+++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEE
Confidence 333444577777774 5542 468888999988888877653
No 153
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=33.32 E-value=59 Score=29.75 Aligned_cols=108 Identities=10% Similarity=0.103 Sum_probs=52.1
Q ss_pred CCceEEEeCCCCCCccccc-CC-C-CCcEEEEechhhhHHHHHHHHhhcCCCC-CCcceEEeecCCCchHHHHHHhcCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL-NW-P-TSTIIFDISPERIFKISAEKLEGVGAKI-PRSCLFLHVPLESSNIQQALRAKGFN 186 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL-~~-~-~~~~~fEVD~P~v~~~K~~~L~~~~~~~-p~~~~~v~vdld~~dw~~~L~~~Gfd 186 (317)
....|+.+|||-=.-+..+ .. + ..++.+|+| |++++.-++.++...... ..+++++..|.. ++... ....||
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid-~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~--~~l~~-~~~~fD 183 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEID-EMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF--EFLKN-HKNEFD 183 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSC-HHHHHHHHHHCTTTSGGGGCTTEEEECSCHH--HHHHH-CTTCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECC-HHHHHHHHHHHHHhccccCCCCEEEEEChHH--HHHHh-cCCCce
Confidence 3468999999975433333 22 2 235555555 456665555554321000 124555555432 22221 112233
Q ss_pred CCCCEEEEEcCCCCCCH-HHH--HHHHHHHHhccCCCcEEEEeC
Q 021091 187 GNRPSVWAIQGLPVMTL-ASF--EDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 187 ~~~Ptl~i~EGv~YL~~-~~v--~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
++++-....+.+ ... ..+++.+.++..||+.++++.
T Consensus 184 -----~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 184 -----VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp -----EEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred -----EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 455443311211 121 577888888888888888874
No 154
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=33.21 E-value=49 Score=29.54 Aligned_cols=108 Identities=10% Similarity=0.117 Sum_probs=56.1
Q ss_pred CCceEEEeCCCCCCccccc-CCC--CCcEEEEechhhhHHHHHHHHhhcCCCC-CCcceEEeecCCCchHHHHHHhcCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL-NWP--TSTIIFDISPERIFKISAEKLEGVGAKI-PRSCLFLHVPLESSNIQQALRAKGFN 186 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL-~~~--~~~~~fEVD~P~v~~~K~~~L~~~~~~~-p~~~~~v~vdld~~dw~~~L~~~Gfd 186 (317)
....|+.+|||-=.-...+ ..+ ..++.+|+|. ++++.-++.++..+... ..+++++..|.. ++ +...
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~--~~---l~~~--- 148 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE-TVIEVSKIYFKNISCGYEDKRVNVFIEDAS--KF---LENV--- 148 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH-HHHHHHHHHCTTTSGGGGSTTEEEEESCHH--HH---HHHC---
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH-HHHHHHHHHhHHhccccCCCcEEEEECChH--HH---HHhC---
Confidence 3468999999965433333 222 2466677765 45555445554321000 125666655542 22 2221
Q ss_pred CCCCEEEEEcCC-CCCCHHHH--HHHHHHHHhccCCCcEEEEeC
Q 021091 187 GNRPSVWAIQGL-PVMTLASF--EDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 187 ~~~Ptl~i~EGv-~YL~~~~v--~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
.+.--++++-.. .....+.. ..+++.+.++..||+.+++..
T Consensus 149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 122234555443 22222222 577888888777888888774
No 155
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=32.81 E-value=83 Score=29.03 Aligned_cols=107 Identities=9% Similarity=0.038 Sum_probs=53.4
Q ss_pred CCceEEEeCCCCCCccccc-CCCC--CcEEEEechhhhHHHHHHHHhhc--CCCCCCcceEEeecCCCchHHHHHHhcCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL-NWPT--STIIFDISPERIFKISAEKLEGV--GAKIPRSCLFLHVPLESSNIQQALRAKGF 185 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL-~~~~--~~~~fEVD~P~v~~~K~~~L~~~--~~~~p~~~~~v~vdld~~dw~~~L~~~Gf 185 (317)
....|+.||||-=.-...+ ..++ .++.+|+|. ++++.-++.++.. +... .+++++..|.. +.|...
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~-~~l~~Ar~~~~~~~~gl~~-~rv~~~~~D~~-----~~l~~~-- 190 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK-MVVDVSKQFFPDVAIGYED-PRVNLVIGDGV-----AFLKNA-- 190 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH-HHHHHHHHHCHHHHGGGGS-TTEEEEESCHH-----HHHHTS--
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH-HHHHHHHHHHHhhccccCC-CcEEEEECCHH-----HHHHhc--
Confidence 4468999999965443333 2222 345555554 4555444444431 1111 25666655432 223221
Q ss_pred CCCCCEEEEEcCC-CCCCHHH--HHHHHHHHHhccCCCcEEEEe
Q 021091 186 NGNRPSVWAIQGL-PVMTLAS--FEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 186 d~~~Ptl~i~EGv-~YL~~~~--v~~Ll~~ia~ls~~gS~l~~d 226 (317)
..+.--++++-.. ..-..+. ...+++.+.++..||+.++++
T Consensus 191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 0112234554433 1111111 356777888877788888886
No 156
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=32.50 E-value=1.5e+02 Score=21.91 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=44.9
Q ss_pred CcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCC-chHHHHHHh-c-CCCCCCCEEEEEcCC-C-CCCHHHHH
Q 021091 134 STIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLES-SNIQQALRA-K-GFNGNRPSVWAIQGL-P-VMTLASFE 207 (317)
Q Consensus 134 ~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~-~dw~~~L~~-~-Gfd~~~Ptl~i~EGv-~-YL~~~~v~ 207 (317)
.+++|--.. |--... +++|.+.+ ..|..+|++. .+..+.+.+ . |. ...|++|+-.|- + -++.+++.
T Consensus 5 ~I~vYs~~~Cp~C~~a-K~~L~~~g------i~y~~idi~~d~~~~~~~~~~~~G~-~tVP~I~i~Dg~~l~~~~~~el~ 76 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRL-KTALTANR------IAYDEVDIEHNRAAAEFVGSVNGGN-RTVPTVKFADGSTLTNPSADEVK 76 (92)
T ss_dssp CEEEEECTTCSSHHHH-HHHHHHTT------CCCEEEETTTCHHHHHHHHHHSSSS-SCSCEEEETTSCEEESCCHHHHH
T ss_pred cEEEEcCCCCHhHHHH-HHHHHhcC------CceEEEEcCCCHHHHHHHHHHcCCC-CEeCEEEEeCCEEEeCCCHHHHH
Confidence 466666655 433333 45677653 4455666653 333444544 3 53 578999998876 4 36778877
Q ss_pred HHHHHHHhc
Q 021091 208 DVLLLVGSL 216 (317)
Q Consensus 208 ~Ll~~ia~l 216 (317)
+-|+.+..+
T Consensus 77 ~~L~el~gL 85 (92)
T 2lqo_A 77 AKLVKIAGL 85 (92)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhcCC
Confidence 766666554
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=30.45 E-value=1.7e+02 Score=25.28 Aligned_cols=125 Identities=12% Similarity=0.064 Sum_probs=67.0
Q ss_pred HHHHHHHHHhccCCCceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhh---cCCCCCCcceEEeecC
Q 021091 98 IDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEG---VGAKIPRSCLFLHVPL 171 (317)
Q Consensus 98 iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~---~~~~~p~~~~~v~vdl 171 (317)
.|..+............|+-||||-=.-..-+ ..| +..++=||. |++++.-++.+.. .+ ...+++++..|+
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l~~~v~~~~~D~ 99 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAA--FSARIEVLEADV 99 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTT--TGGGEEEEECCT
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCC--CcceEEEEeCCH
Confidence 67665443322223458999999976544434 123 355666665 4555544444443 32 123577888887
Q ss_pred CCchHHHHHHhcCCCCCCCEEEEEcCCCCCCH------------------HHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 172 ESSNIQQALRAKGFNGNRPSVWAIQGLPVMTL------------------ASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 172 d~~dw~~~L~~~Gfd~~~Ptl~i~EGv~YL~~------------------~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
.. +.......++....--++++- -+|+.. .....+++.+..+..||+.+++.++
T Consensus 100 ~~--~~~~~~~~~~~~~~fD~Vv~n-PPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 100 TL--RAKARVEAGLPDEHFHHVIMN-PPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TC--CHHHHHHTTCCTTCEEEEEEC-CCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HH--HhhhhhhhccCCCCcCEEEEC-CCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 63 222222223333333455543 235432 2256788888888888888877654
No 158
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=30.35 E-value=1.1e+02 Score=28.70 Aligned_cols=103 Identities=12% Similarity=-0.065 Sum_probs=58.4
Q ss_pred ceEEEeCCCCCCccccc--CCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 113 KQVVLLTDGMDTRPYRL--NWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 113 ~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
..|+-||||.=.-...+ ..| +.+++=||. |.+++.-++.++..+.....+++++..|+.. . +....
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~---------~~~~~ 292 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-G---------VEPFR 292 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-T---------CCTTC
T ss_pred CeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-c---------CCCCC
Confidence 58999999988655554 233 355666665 4555544444554432111145667777653 1 22233
Q ss_pred CEEEEEcCCCC----CCHHHHHHHHHHHHhccCCCcEEEEe
Q 021091 190 PSVWAIQGLPV----MTLASFEDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 190 Ptl~i~EGv~Y----L~~~~v~~Ll~~ia~ls~~gS~l~~d 226 (317)
.-++++-..++ +.......+|+.+.+...||+.+++-
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 44566544422 33444567899999877788877663
No 159
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=28.48 E-value=1.4e+02 Score=25.18 Aligned_cols=118 Identities=11% Similarity=-0.018 Sum_probs=64.9
Q ss_pred CceEEEeCCCCCCcccccC-C-CCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN-W-PTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGN 188 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~-~-~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~ 188 (317)
...|+-+|||.=.-...+. . .++.+++=+|. |+.++.-++.++..+. +.+++++..|+.. . +...
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~--~--------~~~~ 161 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDIYE--G--------IEEE 161 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCGGG--C--------CCCC
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECchhh--c--------cCCC
Confidence 3589999999755444442 1 22467777777 5666665566665542 2347777777641 1 1112
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCC--Cee
Q 021091 189 RPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNG--FGV 257 (317)
Q Consensus 189 ~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~G--w~~ 257 (317)
.--++++ .. .+...+++.+.+...||+.+++..+.... .....+.+.++| |..
T Consensus 162 ~~D~v~~-~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~----------~~~~~~~l~~~g~~f~~ 216 (255)
T 3mb5_A 162 NVDHVIL-DL-----PQPERVVEHAAKALKPGGFFVAYTPCSNQ----------VMRLHEKLREFKDYFMK 216 (255)
T ss_dssp SEEEEEE-CS-----SCGGGGHHHHHHHEEEEEEEEEEESSHHH----------HHHHHHHHHHTGGGBSC
T ss_pred CcCEEEE-CC-----CCHHHHHHHHHHHcCCCCEEEEEECCHHH----------HHHHHHHHHHcCCCccc
Confidence 2223333 11 12245667777777788887765432110 111345678888 863
No 160
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=28.26 E-value=2.1e+02 Score=24.94 Aligned_cols=92 Identities=10% Similarity=0.025 Sum_probs=53.8
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEechh-hhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPE-RIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P-~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...|.. .+.+++=||.- ++++. .. .. .+++++..|++.-. +..+.-
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~-~~~~v~gvD~s~~ml~~-------a~-~~-~~v~~~~~~~e~~~---------~~~~sf 100 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAE-FFERVHAVDPGEAQIRQ-------AL-RH-PRVTYAVAPAEDTG---------LPPASV 100 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHT-TCSEEEEEESCHHHHHT-------CC-CC-TTEEEEECCTTCCC---------CCSSCE
T ss_pred CCCEEEEcCCCCHHHHHHHH-hCCEEEEEeCcHHhhhh-------hh-hc-CCceeehhhhhhhc---------ccCCcc
Confidence 45799999997655555532 23567788874 34331 11 11 26788888876321 222222
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEE
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
-++++-.+ .+++.+ ..++.+.+...||..+++
T Consensus 101 D~v~~~~~~h~~~~~---~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 101 DVAIAAQAMHWFDLD---RFWAELRRVARPGAVFAA 133 (257)
T ss_dssp EEEEECSCCTTCCHH---HHHHHHHHHEEEEEEEEE
T ss_pred cEEEEeeehhHhhHH---HHHHHHHHHcCCCCEEEE
Confidence 34444444 577654 467788888888887653
No 161
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=27.66 E-value=47 Score=29.99 Aligned_cols=131 Identities=12% Similarity=0.088 Sum_probs=62.2
Q ss_pred CCceEEEeCCCCCCccccc-CCC--CCcEEEEechhhhHHHHHHHHhhc-CCCCCCcceEEeecCCCchHHHHHHhcCCC
Q 021091 111 GLKQVVLLTDGMDTRPYRL-NWP--TSTIIFDISPERIFKISAEKLEGV-GAKIPRSCLFLHVPLESSNIQQALRAKGFN 186 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL-~~~--~~~~~fEVD~P~v~~~K~~~L~~~-~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd 186 (317)
....|+.+|||-=.-...+ ..+ ..++.+|+|. ++++.-++.++.. ......+++++..|.. +.+... .
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~-----~~~~~~--~ 166 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDG-EVMEQSKQHFPQISRSLADPRATVRVGDGL-----AFVRQT--P 166 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCH-HHHHHHHHHCHHHHGGGGCTTEEEEESCHH-----HHHHSS--C
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHHhHHhhcccCCCcEEEEECcHH-----HHHHhc--c
Confidence 3468999999976544333 222 2455666664 4555444444321 0001125666665542 222210 0
Q ss_pred CCCCEEEEEcCCCCC-CHHHH--HHHHHHHHhccCCCcEEEEeCch-hhhhhhcCCCCcchHHHHHHHHhCCCe
Q 021091 187 GNRPSVWAIQGLPVM-TLASF--EDVLLLVGSLAMNKCLFLGELPA-WLAETEFGNKSTTEKWMDKLFMSNGFG 256 (317)
Q Consensus 187 ~~~Ptl~i~EGv~YL-~~~~v--~~Ll~~ia~ls~~gS~l~~d~~~-~~~~~~~~~~~~~~~w~~~~l~~~Gw~ 256 (317)
.+.=-++++-...+. +.... ..+++.+.+...||+.+++.... +... .......+.+.+.||.
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~-------~~~~~~~~~l~~~GF~ 233 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDL-------ELIEKMSRFIRETGFA 233 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCH-------HHHHHHHHHHHHHTCS
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccch-------HHHHHHHHHHHhCCCC
Confidence 112235555443222 22222 56788888888888888775321 1100 0111234667888886
No 162
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=26.88 E-value=1e+02 Score=26.90 Aligned_cols=117 Identities=7% Similarity=-0.049 Sum_probs=65.7
Q ss_pred CceEEEeCCCCCCcccccC-C-CCCcEEEEech-hhhHHHHHHHHhhc-CCCCCCcceEEeecCCCchHHHHHHhcCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN-W-PTSTIIFDISP-ERIFKISAEKLEGV-GAKIPRSCLFLHVPLESSNIQQALRAKGFNG 187 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~-~-~~~~~~fEVD~-P~v~~~K~~~L~~~-~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~ 187 (317)
...|+-+|||.=.-...+. . .++..++=+|. |+.++.-++.+... + ..+++++..|+.. + +..
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~--~--------~~~ 177 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD--F--------ISD 177 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT--C--------CCS
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc--c--------CcC
Confidence 3589999999665444442 1 22467777787 66666555555544 3 1367777777653 1 111
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEEeCchhhhhhhcCCCCcchHHHHHHHHhCCCee
Q 021091 188 NRPSVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLGELPAWLAETEFGNKSTTEKWMDKLFMSNGFGV 257 (317)
Q Consensus 188 ~~Ptl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~~~~~~~~~~~~~~~~w~~~~l~~~Gw~~ 257 (317)
+.--++++ .+ .+...+++.+.+...||+.+++..+.... .....+.+.+.||..
T Consensus 178 ~~fD~Vi~----~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----------~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 178 QMYDAVIA----DI--PDPWNHVQKIASMMKPGSVATFYLPNFDQ----------SEKTVLSLSASGMHH 231 (275)
T ss_dssp CCEEEEEE----CC--SCGGGSHHHHHHTEEEEEEEEEEESSHHH----------HHHHHHHSGGGTEEE
T ss_pred CCccEEEE----cC--cCHHHHHHHHHHHcCCCCEEEEEeCCHHH----------HHHHHHHHHHCCCeE
Confidence 22234443 11 12246777888877788877765442110 111335567788874
No 163
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=26.83 E-value=3e+02 Score=23.47 Aligned_cols=110 Identities=9% Similarity=0.049 Sum_probs=55.0
Q ss_pred CceEEEeCCCCCCcccccC--CCCCcEEEEech-hhhHHHHHHHHhh---cCCCCCCcceEEeecCCCchHHHHHHhcCC
Q 021091 112 LKQVVLLTDGMDTRPYRLN--WPTSTIIFDISP-ERIFKISAEKLEG---VGAKIPRSCLFLHVPLESSNIQQALRAKGF 185 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~--~~~~~~~fEVD~-P~v~~~K~~~L~~---~~~~~p~~~~~v~vdld~~dw~~~L~~~Gf 185 (317)
...|+-+|||.=.-...|. .| +..++=||. +.+++.-++.+.. .......+++++..|+.. .+...+...-|
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~-~l~~~~~~~~~ 124 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK-HLPNFFYKGQL 124 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT-CHHHHCCTTCE
T ss_pred CCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH-hhhhhCCCcCe
Confidence 3579999999765444442 33 467777776 4555433332221 111112368888888752 23222222112
Q ss_pred CCCCCEEEEEcCCCCCCHHH------HHHHHHHHHhccCCCcEEEEeC
Q 021091 186 NGNRPSVWAIQGLPVMTLAS------FEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 186 d~~~Ptl~i~EGv~YL~~~~------v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
| .+++.-.-.+..... ...+|+.+.+...||+.+++..
T Consensus 125 D----~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 125 T----KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp E----EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred e----EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 2 222211112221111 1368888999888988877643
No 164
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=26.79 E-value=1.7e+02 Score=25.72 Aligned_cols=106 Identities=11% Similarity=0.133 Sum_probs=53.9
Q ss_pred CCceEEEeCCCCCCccccc-CCC-CCcEEEEechhhhHHHHHHHHhhcC-CC-------CCCcceEEeecCCCchHHHHH
Q 021091 111 GLKQVVLLTDGMDTRPYRL-NWP-TSTIIFDISPERIFKISAEKLEGVG-AK-------IPRSCLFLHVPLESSNIQQAL 180 (317)
Q Consensus 111 g~~QVV~LGAGLDTRa~RL-~~~-~~~~~fEVD~P~v~~~K~~~L~~~~-~~-------~p~~~~~v~vdld~~dw~~~L 180 (317)
....|+.||||-=.-...+ ..+ ..++.+|+|.. +++.-++.+ +.. .. ...+++++..|.. ++...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~-~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~--~~l~~- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDED-VIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGF--EFIKN- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHH-HHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHH--HHHHH-
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHH-HHHHHHHHH-hhccccccccccCCCCcEEEEECchH--HHhcc-
Confidence 3468999999976543333 223 24666777765 444433334 221 00 1125666665542 33222
Q ss_pred HhcCCCCCCCEEEEEcCCCCCC-HHH--HHHHHHHHHhccCCCcEEEEeC
Q 021091 181 RAKGFNGNRPSVWAIQGLPVMT-LAS--FEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 181 ~~~Gfd~~~Ptl~i~EGv~YL~-~~~--v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
...|| ++++-...... ... ...+++.+.++..||+.++++.
T Consensus 150 -~~~fD-----~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGFD-----VIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCEE-----EEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCee-----EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 22233 44444331111 122 2567788888877888888763
No 165
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=25.40 E-value=1.8e+02 Score=25.32 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHhcc---CCCceEEEeCCCCCCccc----cc--CCCCCc--EEEEech-hhhHHHHHHHHhhcCCCC
Q 021091 93 LTTKFIDDKLLRTVNHM---DGLKQVVLLTDGMDTRPY----RL--NWPTST--IIFDISP-ERIFKISAEKLEGVGAKI 160 (317)
Q Consensus 93 ~RTr~iDd~l~~~i~~~---~g~~QVV~LGAGLDTRa~----RL--~~~~~~--~~fEVD~-P~v~~~K~~~L~~~~~~~ 160 (317)
.+..++++.+...+... .....|+-+|||-=.... ++ ..+ ++ .+.-+|. +++++.-++.+.+...
T Consensus 31 ~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~-- 107 (292)
T 2aot_A 31 CMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSN-- 107 (292)
T ss_dssp HHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSS--
T ss_pred HHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccC--
Confidence 34455666665554321 123479999999764221 11 123 34 3478887 5666654444443211
Q ss_pred CCcceEEeecCCCchHHHHHHhcCCCCCCC-EEEEEcCCCCCCHHHHHHHHHHHHhccCCCcEEEE
Q 021091 161 PRSCLFLHVPLESSNIQQALRAKGFNGNRP-SVWAIQGLPVMTLASFEDVLLLVGSLAMNKCLFLG 225 (317)
Q Consensus 161 p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P-tl~i~EGv~YL~~~~v~~Ll~~ia~ls~~gS~l~~ 225 (317)
..+..+.-.+.+.+++..... .||..+.= .++....+.+++ +..+.|+.+.++..||+.+++
T Consensus 108 ~~~v~~~~~~~~~~~~~~~~~-~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 108 LENVKFAWHKETSSEYQSRML-EKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp CTTEEEEEECSCHHHHHHHHH-TTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEE
T ss_pred CCcceEEEEecchhhhhhhhc-cccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEE
Confidence 124444433333222221111 23322222 444444444564 245678889998888887664
No 166
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=24.24 E-value=2.1e+02 Score=24.32 Aligned_cols=123 Identities=11% Similarity=0.062 Sum_probs=69.4
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEechhh-hHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISPER-IFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~P~-v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+-+|||-=.-...+..+ +..++=+|... +++ .... .+ +++++..|+.. +. +....||
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~-------~a~~-~~-~~~~~~~d~~~--~~--~~~~~fD---- 96 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQ-------QAVV-HP-QVEWFTGYAEN--LA--LPDKSVD---- 96 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHH-------SSCC-CT-TEEEECCCTTS--CC--SCTTCBS----
T ss_pred CCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHH-------HHHh-cc-CCEEEECchhh--CC--CCCCCEe----
Confidence 468999999987655555433 57888888743 322 1111 12 67777777753 21 1122344
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCc-EEEEeCch------hhhhhh------cCCCCcchHHHHHHHHhCCCe
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKC-LFLGELPA------WLAETE------FGNKSTTEKWMDKLFMSNGFG 256 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS-~l~~d~~~------~~~~~~------~~~~~~~~~w~~~~l~~~Gw~ 256 (317)
++++-.+ .++ ++...+++.+.+... |+ .++.+... |..... .........++. +|.++||.
T Consensus 97 -~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~ 171 (261)
T 3ege_A 97 -GVISILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKR 171 (261)
T ss_dssp -EEEEESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCS
T ss_pred -EEEEcchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCC
Confidence 4455455 455 445678888888887 76 55555431 111110 011222344456 89999997
Q ss_pred e
Q 021091 257 V 257 (317)
Q Consensus 257 ~ 257 (317)
.
T Consensus 172 ~ 172 (261)
T 3ege_A 172 R 172 (261)
T ss_dssp E
T ss_pred c
Confidence 4
No 167
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=24.11 E-value=1.3e+02 Score=24.61 Aligned_cols=97 Identities=9% Similarity=0.035 Sum_probs=54.1
Q ss_pred CceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNRP 190 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~P 190 (317)
...|+.+|||.=.-...+... +.+++=+|. |+.++.-++.+...+. .+.+++..|+.. .+.. ...|
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~-~~~~---~~~~----- 144 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDL---HNVSTRHGDGWQ-GWQA---RAPF----- 144 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGG-CCGG---GCCE-----
T ss_pred CCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC---CceEEEECCccc-CCcc---CCCc-----
Confidence 458999999964333333211 345555554 5566655555665532 257777777652 1111 2233
Q ss_pred EEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCch
Q 021091 191 SVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELPA 229 (317)
Q Consensus 191 tl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~~ 229 (317)
-++++-++ .++..+ +.++..||+.+++..+.
T Consensus 145 D~i~~~~~~~~~~~~--------~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 145 DAIIVTAAPPEIPTA--------LMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEESSBCSSCCTH--------HHHTEEEEEEEEEEECS
T ss_pred cEEEEccchhhhhHH--------HHHhcccCcEEEEEEcC
Confidence 45666555 566642 44455688888877653
No 168
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=24.02 E-value=1.9e+02 Score=22.11 Aligned_cols=101 Identities=14% Similarity=-0.009 Sum_probs=56.7
Q ss_pred CceEEEeCCCCCCccccc--CCCCCcEEEEechhhhHHHHHHHHhhcCCCCCCcceEEeecCCCchHHHHHHhcCCCCCC
Q 021091 112 LKQVVLLTDGMDTRPYRL--NWPTSTIIFDISPERIFKISAEKLEGVGAKIPRSCLFLHVPLESSNIQQALRAKGFNGNR 189 (317)
Q Consensus 112 ~~QVV~LGAGLDTRa~RL--~~~~~~~~fEVD~P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~dw~~~L~~~Gfd~~~ 189 (317)
...|+.+|||.=.-...+ ..+.+..++=+|..++.+. .+.+++..|+...++.+.+.. ++..+.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~-~~~~~~ 88 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI-------------VGVDFLQGDFRDELVMKALLE-RVGDSK 88 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC-------------TTEEEEESCTTSHHHHHHHHH-HHTTCC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc-------------CcEEEEEcccccchhhhhhhc-cCCCCc
Confidence 358999999874433333 2122355666665443211 267788888875444333322 122334
Q ss_pred CEEEEEcCCC-CCCHH---HH------HHHHHHHHhccCCCcEEEEe
Q 021091 190 PSVWAIQGLP-VMTLA---SF------EDVLLLVGSLAMNKCLFLGE 226 (317)
Q Consensus 190 Ptl~i~EGv~-YL~~~---~v------~~Ll~~ia~ls~~gS~l~~d 226 (317)
--++++-+++ ++... .. ..+++.+.++..||+.+++.
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4567776664 33221 11 57888888887788877764
No 169
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=23.52 E-value=2.3e+02 Score=23.99 Aligned_cols=109 Identities=12% Similarity=0.089 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhccCCCceEEEeCCCCCCcccccCCCCCcEEEEech-hhhHHHHHHHHhhcCCCCCCcceEEeecCCCch
Q 021091 97 FIDDKLLRTVNHMDGLKQVVLLTDGMDTRPYRLNWPTSTIIFDISP-ERIFKISAEKLEGVGAKIPRSCLFLHVPLESSN 175 (317)
Q Consensus 97 ~iDd~l~~~i~~~~g~~QVV~LGAGLDTRa~RL~~~~~~~~fEVD~-P~v~~~K~~~L~~~~~~~p~~~~~v~vdld~~d 175 (317)
.+.+.+.+.+. ....|+-+|||-=.-...+... +..++=+|. |++++.-++... . .++..|+..-.
T Consensus 43 ~~~~~l~~~~~---~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-------~--~~~~~d~~~~~ 109 (260)
T 2avn_A 43 LIGSFLEEYLK---NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-------K--NVVEAKAEDLP 109 (260)
T ss_dssp HHHHHHHHHCC---SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-------S--CEEECCTTSCC
T ss_pred HHHHHHHHhcC---CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-------C--CEEECcHHHCC
Confidence 34455555543 2358999999975544444222 345666666 445443232211 1 25666665211
Q ss_pred HHHHHHhcCCCCCCCEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeCc
Q 021091 176 IQQALRAKGFNGNRPSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGELP 228 (317)
Q Consensus 176 w~~~L~~~Gfd~~~Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~~ 228 (317)
+..+.--++++-++ ..+.++ ...+|+.+.+...||+.+++..+
T Consensus 110 ---------~~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 110 ---------FPSGAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp ---------SCTTCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------CCCCCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeC
Confidence 11122235566554 433233 67788999998889988887654
No 170
>2kzc_A Uncharacterized protein; DUF1476, JCSG, structutral genomics, PSI-biology, protein ST initiative, structural genomics; NMR {Jannaschia SP}
Probab=22.70 E-value=40 Score=25.58 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=26.8
Q ss_pred HHHHHHHhcCchhhhHHHHHHHHHh--hhhcCccCc
Q 021091 281 ILFLAEQLRFSDDQMDTWRRELQRV--EEEGDEEGF 314 (317)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 314 (317)
.++.+..+|++.++-+.|...+-.+ ||.+|||-|
T Consensus 15 glWAAe~lGltg~~aeaYa~~vv~adfee~gdedV~ 50 (85)
T 2kzc_A 15 GLWVAEVLGKSGDEANAYAAEVVKADFEEAGHEDVM 50 (85)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHGGGSSSSSSSSSHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhcccCCHHHHH
Confidence 3567888999999999999998766 445677654
No 171
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=21.91 E-value=1.8e+02 Score=27.50 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=57.4
Q ss_pred CCCceEEEeCCCCCCccccc-CC-CCCcEEEEechhhhHHHHHHHHhhcCC---CCC--CcceEEeecCCCchHHHHHH-
Q 021091 110 DGLKQVVLLTDGMDTRPYRL-NW-PTSTIIFDISPERIFKISAEKLEGVGA---KIP--RSCLFLHVPLESSNIQQALR- 181 (317)
Q Consensus 110 ~g~~QVV~LGAGLDTRa~RL-~~-~~~~~~fEVD~P~v~~~K~~~L~~~~~---~~p--~~~~~v~vdld~~dw~~~L~- 181 (317)
+....|++||+|-=.-+.-+ .. +..++.+|+|.. |++.-++.++.... ..| ++++.+..|.. .|.+.+.
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~-vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~--~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQM-VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI--PVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHH-HHHHHHHHCCC----CCSSSEETTEEEEESCHH--HHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHH-HHHHHHHHHHHhccccccccCCCcEEEEECcHH--HHHHhhhc
Confidence 34578999999865433322 22 345788888854 65655555554321 112 14566655543 4555542
Q ss_pred -hcCCCCCCCEEEEEcCC-------C--CCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 182 -AKGFNGNRPSVWAIQGL-------P--VMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 182 -~~Gfd~~~Ptl~i~EGv-------~--YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
...|| +++.-.- + .++.+-.+.+++.+.++..||+.++...
T Consensus 264 ~~~~fD-----vII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 264 EGREFD-----YVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HTCCEE-----EEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCce-----EEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 22243 3333221 1 1223444455555577777888887764
No 172
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=21.24 E-value=73 Score=28.62 Aligned_cols=38 Identities=13% Similarity=0.034 Sum_probs=32.4
Q ss_pred CEEEEEcCC-CCCCHHHHHHHHHHHHhccCCCcEEEEeC
Q 021091 190 PSVWAIQGL-PVMTLASFEDVLLLVGSLAMNKCLFLGEL 227 (317)
Q Consensus 190 Ptl~i~EGv-~YL~~~~v~~Ll~~ia~ls~~gS~l~~d~ 227 (317)
=-++++-.| .|++++...++++.+.....||+.+++..
T Consensus 214 fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 214 FDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 357778888 59999999999999999988999988865
Done!