AmiGO: BLAST Results


BLAST match view associations BLAST with AT5G05140 AT5G05140 AT5G05140	protein from Arabidopsis thaliana	3.2e-72
BLAST match view associations BLAST with AT5G09850 AT5G09850 AT5G09850	protein from Arabidopsis thaliana	5.5e-22
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Rhabdomyosarcoma antigen MU-RMS-40.22	protein from Homo sapiens	2.4e-07
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Canis lupus familiaris	3.9e-07
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	3.8e-06
BLAST match view associations BLAST with tcea1 tcea1 tcea1 transcription elongation factor A (SII), 1	gene_product from Danio rerio	1.2e-05
BLAST match view associations BLAST with Tcea3 Tcea3 Tcea3 transcription elongation factor A (SII), 3	protein from Mus musculus	1.5e-05
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Uncharacterized protein	protein from Gallus gallus	2.6e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Transcription elongation factor A N-terminal and central domain-containing protein 2	protein from Bos taurus	2.9e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Transcription elongation factor A N-terminal and central domain-containing protein 2	protein from Bos taurus	2.9e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Transcription elongation factor A N-terminal and central domain-containing protein 2	protein from Homo sapiens	2.9e-05
BLAST match view associations BLAST with Tcea3 Tcea3 Tcea3 transcription elongation factor A (SII), 3	gene from Rattus norvegicus	3.3e-05
BLAST match view associations BLAST with TCEA1 TCEA1 TCEA1 Transcription elongation factor A protein 1	protein from Homo sapiens	3.7e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Transcription elongation factor A protein 3	protein from Homo sapiens	4.2e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Sus scrofa	4.8e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Uncharacterized protein	protein from Sus scrofa	5.2e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Transcription elongation factor A protein 3	protein from Bos taurus	5.6e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Transcription elongation factor A protein 3	protein from Bos taurus	5.6e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Canis lupus familiaris	7.2e-05
BLAST match view associations BLAST with tcea3 tcea3 tcea3 transcription elongation factor A (SII), 3	gene_product from Danio rerio	0.00012
BLAST match view associations BLAST with Tcea2 Tcea2 Tcea2 transcription elongation factor A (SII), 2	protein from Mus musculus	0.00015
BLAST match view associations BLAST with Tcea2 Tcea2 Tcea2 transcription elongation factor A (SII), 2	gene from Rattus norvegicus	0.00015
BLAST match view associations BLAST with TCEA1 TCEA1 TCEA1 Transcription elongation factor A protein 1	protein from Homo sapiens	0.00017
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	0.00020
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	0.00033
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	0.00035
BLAST match view associations BLAST with tceanc2 tceanc2 tceanc2 transcription elongation factor A (SII) N-terminal and central domain containing 2	gene_product from Danio rerio	0.00037
BLAST match view associations BLAST with tcea1 tcea1 tcea1 RNA polymerase II elongation factor	gene from Dictyostelium discoideum	0.00038
BLAST match view associations BLAST with TFIIS TFIIS TFIIS transcript elongation factor IIS	protein from Arabidopsis thaliana	0.00039
BLAST match view associations BLAST with TCEB3 TCEB3 TCEB3 Uncharacterized protein	protein from Bos taurus	0.00042
BLAST match view associations BLAST with tcea2 tcea2 tcea2 transcription elongation factor A (SII), 2	gene_product from Danio rerio	0.00043

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021095
        (317 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2156814 - symbol:AT5G05140 species:3702 "Arabi...   730  3.2e-72   1
TAIR|locus:2178173 - symbol:AT5G09850 species:3702 "Arabi...   256  5.5e-22   1
UNIPROTKB|Q5DR83 - symbol:TCEA3 "Rhabdomyosarcoma antigen...   124  2.4e-07   1
UNIPROTKB|E2R638 - symbol:TCEA3 "Uncharacterized protein"...   122  3.9e-07   1
UNIPROTKB|Q5JRI8 - symbol:TCEA2 "Transcription elongation...   113  3.8e-06   1
ZFIN|ZDB-GENE-030131-8049 - symbol:tcea1 "transcription e...   128  1.2e-05   1
MGI|MGI:1196908 - symbol:Tcea3 "transcription elongation ...   128  1.5e-05   1
UNIPROTKB|F1NBF9 - symbol:TCEA2 "Uncharacterized protein"...   125  2.6e-05   1
UNIPROTKB|A5PKE4 - symbol:TCEANC2 "Transcription elongati...   120  2.9e-05   1
UNIPROTKB|F1MBR2 - symbol:TCEANC2 "Transcription elongati...   120  2.9e-05   1
UNIPROTKB|Q96MN5 - symbol:TCEANC2 "Transcription elongati...   120  2.9e-05   1
RGD|1311369 - symbol:Tcea3 "transcription elongation fact...   125  3.3e-05   1
UNIPROTKB|E5RIS7 - symbol:TCEA1 "Transcription elongation...   104  3.7e-05   1
UNIPROTKB|F6X6Y7 - symbol:TCEA3 "Uncharacterized protein"...   122  4.0e-05   1
UNIPROTKB|O75764 - symbol:TCEA3 "Transcription elongation...   124  4.2e-05   1
UNIPROTKB|I3LP05 - symbol:TCEA3 "Uncharacterized protein"...   103  4.8e-05   1
UNIPROTKB|I3LKH0 - symbol:TCEANC2 "Uncharacterized protei...   118  5.2e-05   1
UNIPROTKB|F1N0P7 - symbol:TCEA3 "Transcription elongation...   123  5.6e-05   1
UNIPROTKB|Q2KI09 - symbol:TCEA3 "Transcription elongation...   123  5.6e-05   1
UNIPROTKB|E2RIY6 - symbol:TCEA3 "Uncharacterized protein"...   122  7.2e-05   1
ZFIN|ZDB-GENE-040426-1860 - symbol:tcea3 "transcription e...   121  0.00012   1
MGI|MGI:107368 - symbol:Tcea2 "transcription elongation f...   118  0.00015   1
RGD|61825 - symbol:Tcea2 "transcription elongation factor...   118  0.00015   1
UNIPROTKB|Q63799 - symbol:Tcea2 "Transcription elongation...   118  0.00015   1
UNIPROTKB|E5RJ93 - symbol:TCEA1 "Transcription elongation...    98  0.00017   1
UNIPROTKB|Q86VL0 - symbol:TCEA2 "TCEA2 protein" species:9...   115  0.00020   1
UNIPROTKB|Q15560 - symbol:TCEA2 "Transcription elongation...   115  0.00033   1
UNIPROTKB|Q5JRI7 - symbol:TCEA2 "Transcription elongation...   113  0.00035   1
ZFIN|ZDB-GENE-070705-486 - symbol:tceanc2 "transcription ...   111  0.00037   1
DICTYBASE|DDB_G0278241 - symbol:tcea1 "RNA polymerase II ...   115  0.00038   1
TAIR|locus:2064195 - symbol:TFIIS "transcript elongation ...   116  0.00039   1
UNIPROTKB|G3N2S6 - symbol:TCEB3 "Uncharacterized protein"...   120  0.00042   1
ZFIN|ZDB-GENE-040426-985 - symbol:tcea2 "transcription el...   114  0.00043   1
UNIPROTKB|D4A6D1 - symbol:Tcea2 "Transcription elongation...   113  0.00046   1


>TAIR|locus:2156814 [details] [associations]
            symbol:AT5G05140 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0009611 "response to wounding" evidence=RCA]
            [GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA] [GO:0009753
            "response to jasmonic acid stimulus" evidence=RCA] [GO:0010200
            "response to chitin" evidence=RCA] InterPro:IPR017923 Pfam:PF08711
            PROSITE:PS51319 GO:GO:0005634 EMBL:CP002688 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003746 EMBL:AB018111
            Gene3D:1.20.930.10 SUPFAM:SSF47676 EMBL:AY062787 EMBL:AY081599
            IPI:IPI00527750 RefSeq:NP_196133.3 UniGene:At.21997
            ProteinModelPortal:Q9FHK9 SMR:Q9FHK9 PRIDE:Q9FHK9
            EnsemblPlants:AT5G05140.1 GeneID:830396 KEGG:ath:AT5G05140
            TAIR:At5g05140 eggNOG:NOG250858 HOGENOM:HOG000241439
            InParanoid:Q9FHK9 OMA:FDEMDED PhylomeDB:Q9FHK9
            ProtClustDB:CLSN2918616 Genevestigator:Q9FHK9 Uniprot:Q9FHK9
        Length = 436

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 161/269 (59%), Positives = 192/269 (71%)

Query:     3 MK-SGSLDNWRNYFRS-ANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
             MK SGSLD+WR YFR   + DIF IIDHA+MVAA DCP +FK RRD+IAE LF+C++ RC
Sbjct:     1 MKASGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRC 60

Query:    61 SGCDRVELAVPSGNEFDDDEEDCKRDGC----EFE-AGGSKESKVNSCRDDHVSNQIVSN 115
              GCD +EL+VP  +E +         G     ++E AGGSKESK NS R D+  NQIVSN
Sbjct:    61 VGCDHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGDN--NQIVSN 118

Query:   116 FSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLK 175
             ++  D AEAL+DEIEE S V  EV RIKEIL N  DE +SVL +SLR L+LM+L VD LK
Sbjct:   119 YTF-DEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILK 177

Query:   176 ATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI--AEGTPDSVNPSVVD 233
             +TEIGKAVNGLRKH S +IR LA+TLI  WK+LVD+WVN TK I  AEGTP+S NPSV+D
Sbjct:   178 STEIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVLD 237

Query:   234 EEEGLPSPPLDELAFFTGPSAGIELSQVF 262
             EEE  PS P D +  FT    G E+S  F
Sbjct:   238 EEEAFPSLPYD-VDIFTPEPNGFEISHFF 265


>TAIR|locus:2178173 [details] [associations]
            symbol:AT5G09850 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR017923 Pfam:PF08711 PROSITE:PS51319 GO:GO:0005829
            GO:GO:0005634 EMBL:CP002688 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AB016893 GO:GO:0003746 Gene3D:1.20.930.10
            SUPFAM:SSF47676 EMBL:AY058141 EMBL:AY093710 IPI:IPI00530321
            RefSeq:NP_568218.1 UniGene:At.23236 ProteinModelPortal:F4KFC7
            SMR:F4KFC7 PRIDE:F4KFC7 EnsemblPlants:AT5G09850.1 GeneID:830845
            KEGG:ath:AT5G09850 TAIR:At5g09850 eggNOG:NOG237901
            HOGENOM:HOG000243987 InParanoid:Q9FIC1 OMA:NIVERLY Uniprot:F4KFC7
        Length = 353

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 72/230 (31%), Positives = 115/230 (50%)

Query:     8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-TCKLTRCSGCDRV 66
             LD++R+   +A  D++  ID A++VA+LD  +E K RRD I E+L+ T    +C  CD  
Sbjct:     3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD-- 60

Query:    67 ELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALT 126
                   GN  +             E     E  V +  ++ V  + V N    D  +   
Sbjct:    61 --FGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSV-NVEDDDDFDPFA 117

Query:   127 DEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGL 186
                ++E +    ++ IKE L +  D S+  L E L+ L+ M +T   L+ T+IG+ VN +
Sbjct:   118 GLFDDEQK---SIVEIKEKLEDP-DLSEESLVELLQNLEDMDITFQALQETDIGRHVNRV 173

Query:   187 RKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE 236
             RKH S  +R LA+ L++ WK+ VDEWV   +    G  D   PS++ +E+
Sbjct:   174 RKHPSNNVRRLAKQLVKKWKETVDEWVKFNQP---G--DLEPPSLIADED 218


>UNIPROTKB|Q5DR83 [details] [associations]
            symbol:TCEA3 "Rhabdomyosarcoma antigen MU-RMS-40.22"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003617 InterPro:IPR017923
            Pfam:PF08711 PROSITE:PS51319 SMART:SM00509 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 EMBL:AL357134 Gene3D:1.20.930.10
            SUPFAM:SSF47676 EMBL:AL109936 UniGene:Hs.446354 HGNC:HGNC:11615
            ChiTaRS:TCEA3 EMBL:AY540752 IPI:IPI01012612
            ProteinModelPortal:Q5DR83 SMR:Q5DR83 STRING:Q5DR83
            Ensembl:ENST00000374601 UCSC:uc010ody.1 ArrayExpress:Q5DR83
            Bgee:Q5DR83 Uniprot:Q5DR83
        Length = 154

 Score = 124 (48.7 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI + L    +R  ++  L + L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>UNIPROTKB|E2R638 [details] [associations]
            symbol:TCEA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003617 InterPro:IPR017923
            Pfam:PF08711 PROSITE:PS51319 SMART:SM00509 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.20.930.10 SUPFAM:SSF47676
            Ensembl:ENSCAFT00000003983 Uniprot:E2R638
        Length = 154

 Score = 122 (48.0 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 31/76 (40%), Positives = 46/76 (60%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI   L    +R  S+  L   L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIARKLEKMVARKNSEGAL-GLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>UNIPROTKB|Q5JRI8 [details] [associations]
            symbol:TCEA2 "Transcription elongation factor A protein 2"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            InterPro:IPR017923 Pfam:PF08711 PROSITE:PS51319 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003746 Gene3D:1.20.930.10
            SUPFAM:SSF47676 EMBL:AL590548 EMBL:AL355803 UniGene:Hs.505004
            UniGene:Hs.736326 HGNC:HGNC:11614 IPI:IPI00384330 SMR:Q5JRI8
            STRING:Q5JRI8 Ensembl:ENST00000415602 UCSC:uc010gku.2
            Uniprot:Q5JRI8
        Length = 82

 Score = 113 (44.8 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 30/82 (36%), Positives = 46/82 (56%)

Query:   161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
             LR L+ M +T+  L++T +G +VN LRK  S +++  LA++LI+ WK L+D   +  KA 
Sbjct:     4 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD--ASDAKAR 61

Query:   220 AEGTPDSVNPSVVDEEEGLPSP 241
               G    +  S  D  E  P P
Sbjct:    62 ERGRGMPLPTSSRDASEA-PDP 82


>ZFIN|ZDB-GENE-030131-8049 [details] [associations]
            symbol:tcea1 "transcription elongation factor A
            (SII), 1" species:7955 "Danio rerio" [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
            [GO:0003746 "translation elongation factor activity" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00509 SMART:SM00510
            ZFIN:ZDB-GENE-030131-8049 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006357 GO:GO:0006351 GO:GO:0003746 Gene3D:1.10.472.30
            SUPFAM:SSF46942 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784
            eggNOG:COG1594 CTD:6917 HOGENOM:HOG000195015 HOVERGEN:HBG055022
            KO:K03145 OrthoDB:EOG4SN1PH TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 EMBL:AL929271 EMBL:CT955968
            EMBL:BC053177 IPI:IPI00500366 RefSeq:NP_956288.1 UniGene:Dr.11529
            SMR:Q7T3C1 STRING:Q7T3C1 Ensembl:ENSDART00000101861 GeneID:336105
            KEGG:dre:336105 NextBio:20811191 Uniprot:Q7T3C1
        Length = 309

 Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 33/106 (31%), Positives = 58/106 (54%)

Query:   138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-QIR 195
             E++RI + +     + + V   + L+ L+ + +T++ L++T IG +VN +RK  +  ++ 
Sbjct:     8 EIIRIAKKMDKMAQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVT 67

Query:   196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSP 241
              LA++LI+ WK L+DE   A K   E   +   P VV   E  P P
Sbjct:    68 SLAKSLIKSWKKLLDEPA-ADKNSEEKKKERTTP-VVSPSETSPEP 111


>MGI|MGI:1196908 [details] [associations]
            symbol:Tcea3 "transcription elongation factor A (SII), 3"
            species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003746
            "translation elongation factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006414 "translational elongation" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] InterPro:IPR001222
            InterPro:IPR003617 InterPro:IPR003618 InterPro:IPR006289
            InterPro:IPR016492 InterPro:IPR017890 InterPro:IPR017923
            Pfam:PF01096 Pfam:PF07500 Pfam:PF08711 PIRSF:PIRSF006704
            PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319 PROSITE:PS51321
            SMART:SM00440 SMART:SM00509 SMART:SM00510 MGI:MGI:1196908
            GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.472.30 SUPFAM:SSF46942
            EMBL:AL935264 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784
            eggNOG:COG1594 HOGENOM:HOG000195015 HOVERGEN:HBG055022
            TIGRFAMs:TIGR01385 GeneTree:ENSGT00390000017794 CTD:6920
            OrthoDB:EOG4NP741 OMA:KGLDCSD ChiTaRS:TCEA3 EMBL:D00926
            EMBL:AJ223472 EMBL:AK002319 EMBL:AK007437 EMBL:AK019024
            EMBL:BC010807 IPI:IPI00137142 RefSeq:NP_035672.1 UniGene:Mm.112
            PDB:1WJT PDBsum:1WJT ProteinModelPortal:P23881 SMR:P23881
            STRING:P23881 PhosphoSite:P23881 PRIDE:P23881
            Ensembl:ENSMUST00000102533 GeneID:21401 KEGG:mmu:21401
            UCSC:uc008vhv.2 InParanoid:A2AW46 EvolutionaryTrace:P23881
            NextBio:300664 Bgee:P23881 CleanEx:MM_TCEA3 Genevestigator:P23881
            GermOnline:ENSMUSG00000001604 Uniprot:P23881
        Length = 347

 Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 31/76 (40%), Positives = 49/76 (64%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI + L    SR +++  L + L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>UNIPROTKB|F1NBF9 [details] [associations]
            symbol:TCEA2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0005813 "centrosome"
            evidence=IEA] InterPro:IPR001222 InterPro:IPR003617
            InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
            InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
            Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00509 SMART:SM00510
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0006357
            GO:GO:0006351 Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 OMA:AVGADCE EMBL:AADN02019186
            EMBL:AADN02019187 IPI:IPI00585750 Ensembl:ENSGALT00000009608
            Uniprot:F1NBF9
        Length = 312

 Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 33/104 (31%), Positives = 65/104 (62%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E++RI + L    ++  +D  + + L+ L+ M +T+D L++T IG +VN LRK  S +++
Sbjct:    32 EIVRIAKRLDKMVAKKSADGAM-DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEEV 90

Query:   195 RHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVN-PSVVDEEEG 237
               LA++LI+ WK L+D  ++A++  +E    +++ P+   +E G
Sbjct:    91 IALAKSLIKSWKKLLD--LDASEEKSEEKKKNLSLPTSSSKETG 132


>UNIPROTKB|A5PKE4 [details] [associations]
            symbol:TCEANC2 "Transcription elongation factor A
            N-terminal and central domain-containing protein 2" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003618 InterPro:IPR017923
            Pfam:PF08711 PROSITE:PS51319 PROSITE:PS51321 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.472.30 Gene3D:1.20.930.10
            SUPFAM:SSF47676 EMBL:BC142457 IPI:IPI00868616 RefSeq:NP_001098462.1
            UniGene:Bt.35742 ProteinModelPortal:A5PKE4 GeneID:539385
            KEGG:bta:539385 CTD:127428 eggNOG:NOG309610 HOGENOM:HOG000008018
            HOVERGEN:HBG058410 InParanoid:A5PKE4 OrthoDB:EOG44QT23
            NextBio:20877958 Uniprot:A5PKE4
        Length = 208

 Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 30/96 (31%), Positives = 52/96 (54%)

Query:   119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
             G I +  T E  +   V+ ++ R K +L    D+S   L E+LR L+    + + LK+T+
Sbjct:    22 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVEALRELKKKIPSREVLKSTK 80

Query:   179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
             IG  VN +R+H   ++  LAR +   W+  +++ VN
Sbjct:    81 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHVN 116


>UNIPROTKB|F1MBR2 [details] [associations]
            symbol:TCEANC2 "Transcription elongation factor A
            N-terminal and central domain-containing protein 2" species:9913
            "Bos taurus" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003618 InterPro:IPR017923
            Pfam:PF08711 PROSITE:PS51319 PROSITE:PS51321 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.472.30 Gene3D:1.20.930.10
            SUPFAM:SSF47676 IPI:IPI00868616 UniGene:Bt.35742
            GeneTree:ENSGT00390000014384 OMA:REVYTEW EMBL:DAAA02008837
            Ensembl:ENSBTAT00000012535 Uniprot:F1MBR2
        Length = 208

 Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 30/96 (31%), Positives = 52/96 (54%)

Query:   119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
             G I +  T E  +   V+ ++ R K +L    D+S   L E+LR L+    + + LK+T+
Sbjct:    22 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVEALRELKKKIPSREVLKSTK 80

Query:   179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
             IG  VN +R+H   ++  LAR +   W+  +++ VN
Sbjct:    81 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHVN 116


>UNIPROTKB|Q96MN5 [details] [associations]
            symbol:TCEANC2 "Transcription elongation factor A
            N-terminal and central domain-containing protein 2" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR003618 InterPro:IPR017923 Pfam:PF07500
            Pfam:PF08711 PROSITE:PS51319 PROSITE:PS51321 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.472.30 Gene3D:1.20.930.10
            SUPFAM:SSF47676 EMBL:AL353898 CTD:127428 eggNOG:NOG309610
            HOVERGEN:HBG058410 OrthoDB:EOG44QT23 EMBL:AK056674 EMBL:AK096488
            EMBL:BC035374 IPI:IPI00645722 IPI:IPI00845424 RefSeq:NP_694580.1
            UniGene:Hs.558618 HSSP:P23881 ProteinModelPortal:Q96MN5 SMR:Q96MN5
            PhosphoSite:Q96MN5 DMDM:74752040 PaxDb:Q96MN5 PRIDE:Q96MN5
            DNASU:127428 Ensembl:ENST00000234827 Ensembl:ENST00000371331
            GeneID:127428 KEGG:hsa:127428 UCSC:uc001cwt.1 GeneCards:GC01P054520
            HGNC:HGNC:26494 HPA:HPA046918 neXtProt:NX_Q96MN5
            PharmGKB:PA142672531 InParanoid:Q96MN5 PhylomeDB:Q96MN5
            GenomeRNAi:127428 NextBio:82091 Bgee:Q96MN5 CleanEx:HS_C1orf83
            Genevestigator:Q96MN5 Uniprot:Q96MN5
        Length = 208

 Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 32/111 (28%), Positives = 53/111 (47%)

Query:   104 RDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRR 163
             R   + N      S G + +  T E  +   VV ++ R K +L    D++   L E+L+ 
Sbjct:     7 RTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLVEALQE 65

Query:   164 LQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
             L+    + + LK+T IG  VN +RKH   ++  LAR +   WK   ++  N
Sbjct:    66 LKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSN 116


>RGD|1311369 [details] [associations]
            symbol:Tcea3 "transcription elongation factor A (SII), 3"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003746 "translation elongation factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0032784 "regulation of DNA-dependent transcription, elongation"
            evidence=IEA] InterPro:IPR001222 InterPro:IPR003617
            InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
            InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
            Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133
            PROSITE:PS51319 PROSITE:PS51321 SMART:SM00440 SMART:SM00509
            SMART:SM00510 RGD:1311369 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006357 GO:GO:0006351 GO:GO:0003746 Gene3D:1.10.472.30
            SUPFAM:SSF46942 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784
            eggNOG:COG1594 HOGENOM:HOG000195015 HOVERGEN:HBG055022
            TIGRFAMs:TIGR01385 GeneTree:ENSGT00390000017794 CTD:6920
            OrthoDB:EOG4NP741 EMBL:BC091180 IPI:IPI00365276
            RefSeq:NP_001015008.1 UniGene:Rn.11547 SMR:Q5BK74
            Ensembl:ENSRNOT00000015776 GeneID:298559 KEGG:rno:298559
            UCSC:RGD:1311369 InParanoid:Q5BK74 NextBio:643942
            Genevestigator:Q5BK74 Uniprot:Q5BK74
        Length = 348

 Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 30/76 (39%), Positives = 49/76 (64%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI + L    +R +++  L + L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>UNIPROTKB|E5RIS7 [details] [associations]
            symbol:TCEA1 "Transcription elongation factor A protein 1"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003617 InterPro:IPR017923
            Pfam:PF08711 PROSITE:PS51319 SMART:SM00509 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.20.930.10 SUPFAM:SSF47676
            EMBL:AC100821 HGNC:HGNC:11612 IPI:IPI00975678
            ProteinModelPortal:E5RIS7 SMR:E5RIS7 PRIDE:E5RIS7
            Ensembl:ENST00000520534 ArrayExpress:E5RIS7 Bgee:E5RIS7
            Uniprot:E5RIS7
        Length = 111

 Score = 104 (41.7 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 22/75 (29%), Positives = 47/75 (62%)

Query:   138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
             EV+R  + +     + ++    + L+ L+ + +T++ L++T IG +VN +RK  + +++ 
Sbjct:     4 EVVRFAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63

Query:   196 HLARTLIEGWKDLVD 210
              LA++LI+ WK L+D
Sbjct:    64 SLAKSLIKSWKKLLD 78


>UNIPROTKB|F6X6Y7 [details] [associations]
            symbol:TCEA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR016492 InterPro:IPR017923 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS51319 PROSITE:PS51321 SMART:SM00509
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0006351
            Gene3D:1.10.472.30 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784
            GeneTree:ENSGT00390000017794 Ensembl:ENSCAFT00000003983
            EMBL:AAEX03001757 Uniprot:F6X6Y7
        Length = 268

 Score = 122 (48.0 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 31/76 (40%), Positives = 46/76 (60%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI   L    +R  S+  L   L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIARKLEKMVARKNSEGAL-GLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>UNIPROTKB|O75764 [details] [associations]
            symbol:TCEA3 "Transcription elongation factor A protein 3"
            species:9606 "Homo sapiens" [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032784
            "regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001222 InterPro:IPR003617
            InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
            InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
            Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133
            PROSITE:PS51319 PROSITE:PS51321 SMART:SM00440 SMART:SM00509
            SMART:SM00510 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 EMBL:AL357134
            Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 EMBL:AL109936 eggNOG:COG1594
            HOGENOM:HOG000195015 HOVERGEN:HBG055022 TIGRFAMs:TIGR01385 CTD:6920
            OrthoDB:EOG4NP741 EMBL:AK290272 EMBL:BC041613 EMBL:AJ223473
            IPI:IPI00178146 RefSeq:NP_003187.1 UniGene:Hs.446354
            ProteinModelPortal:O75764 SMR:O75764 IntAct:O75764 STRING:O75764
            PhosphoSite:O75764 PaxDb:O75764 PRIDE:O75764 DNASU:6920
            Ensembl:ENST00000450454 GeneID:6920 KEGG:hsa:6920 UCSC:uc021oig.1
            GeneCards:GC01M023706 HGNC:HGNC:11615 HPA:HPA044960 MIM:604128
            neXtProt:NX_O75764 PharmGKB:PA36374 InParanoid:O75764 OMA:KGLDCSD
            ChiTaRS:TCEA3 GenomeRNAi:6920 NextBio:27073 ArrayExpress:O75764
            Bgee:O75764 CleanEx:HS_TCEA3 Genevestigator:O75764
            GermOnline:ENSG00000204219 Uniprot:O75764
        Length = 348

 Score = 124 (48.7 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI + L    +R  ++  L + L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>UNIPROTKB|I3LP05 [details] [associations]
            symbol:TCEA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR017923 Pfam:PF08711 PROSITE:PS51319
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GeneTree:ENSGT00390000017794
            Ensembl:ENSSSCT00000032136 OMA:PLMERSN Uniprot:I3LP05
        Length = 124

 Score = 103 (41.3 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query:   169 LTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
             +++  L+ T IG AVNG+RKH S K++  LA+ LI  WK L+D
Sbjct:     1 MSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIRNWKRLLD 43


>UNIPROTKB|I3LKH0 [details] [associations]
            symbol:TCEANC2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003618 InterPro:IPR017923 Pfam:PF07500
            Pfam:PF08711 PROSITE:PS51319 PROSITE:PS51321 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.472.30 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GeneTree:ENSGT00390000014384 OMA:REVYTEW
            EMBL:FP475975 RefSeq:XP_003356504.1 Ensembl:ENSSSCT00000029087
            GeneID:100621219 KEGG:ssc:100621219 Uniprot:I3LKH0
        Length = 208

 Score = 118 (46.6 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 30/106 (28%), Positives = 52/106 (49%)

Query:   119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
             G I +  T E  +   V+ ++ R K +L    D++   L E LR L+    + + LK+T 
Sbjct:    22 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQTKENLVEVLRELKKKIPSREVLKSTR 80

Query:   179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTP 224
             IG  VN +R+H   ++  LAR +   W+  ++E V+    +    P
Sbjct:    81 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEEHVDRPSIVVRSDP 126


>UNIPROTKB|F1N0P7 [details] [associations]
            symbol:TCEA3 "Transcription elongation factor A protein 3"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0032784 "regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS51133 PROSITE:PS51319 PROSITE:PS51321
            SMART:SM00440 SMART:SM00509 SMART:SM00510 GO:GO:0005634
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
            Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 IPI:IPI00713590 OMA:KGLDCSD
            EMBL:DAAA02006436 EMBL:DAAA02006437 Ensembl:ENSBTAT00000004501
            Uniprot:F1N0P7
        Length = 348

 Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI + L    +R +++  L + L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI  WK L+D
Sbjct:    65 VALAKVLIRNWKQLLD 80


>UNIPROTKB|Q2KI09 [details] [associations]
            symbol:TCEA3 "Transcription elongation factor A protein 3"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00509 SMART:SM00510
            GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.472.30 SUPFAM:SSF46942
            Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784 eggNOG:COG1594
            HOGENOM:HOG000195015 HOVERGEN:HBG055022 TIGRFAMs:TIGR01385
            EMBL:BC112812 IPI:IPI00713590 RefSeq:NP_001039825.1
            UniGene:Bt.28947 ProteinModelPortal:Q2KI09 SMR:Q2KI09 PRIDE:Q2KI09
            GeneID:533803 KEGG:bta:533803 CTD:6920 InParanoid:Q2KI09
            OrthoDB:EOG4NP741 NextBio:20876155 Uniprot:Q2KI09
        Length = 349

 Score = 123 (48.4 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI + L    +R +++  L + L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI  WK L+D
Sbjct:    65 VALAKVLIRNWKQLLD 80


>UNIPROTKB|E2RIY6 [details] [associations]
            symbol:TCEA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00509 SMART:SM00510
            GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0006357
            GO:GO:0006351 Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 OMA:KGLDCSD EMBL:AAEX03001757
            Ensembl:ENSCAFT00000021079 Uniprot:E2RIY6
        Length = 348

 Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
 Identities = 31/76 (40%), Positives = 46/76 (60%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+LRI   L    +R  S+  L   L++L    +++  L+ T IG AVNG+RKH S K++
Sbjct:     6 ELLRIARKLEKMVARKNSEGAL-GLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64

Query:   195 RHLARTLIEGWKDLVD 210
               LA+ LI+ WK L+D
Sbjct:    65 VSLAKVLIKNWKRLLD 80


>ZFIN|ZDB-GENE-040426-1860 [details] [associations]
            symbol:tcea3 "transcription elongation factor A
            (SII), 3" species:7955 "Danio rerio" [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
            [GO:0003746 "translation elongation factor activity" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00509 SMART:SM00510
            ZFIN:ZDB-GENE-040426-1860 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006357 GO:GO:0006351 GO:GO:0003746 Gene3D:1.10.472.30
            SUPFAM:SSF46942 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784
            eggNOG:COG1594 HOGENOM:HOG000195015 HOVERGEN:HBG055022
            TIGRFAMs:TIGR01385 GeneTree:ENSGT00390000017794 CTD:6920
            EMBL:CR855299 EMBL:FP102461 EMBL:BC065444 IPI:IPI00496427
            RefSeq:NP_991246.1 UniGene:Dr.85211 SMR:Q6P0U5
            Ensembl:ENSDART00000006061 GeneID:402983 KEGG:dre:402983
            InParanoid:Q6P0U5 NextBio:20816790 Uniprot:Q6P0U5
        Length = 409

 Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 39/124 (31%), Positives = 61/124 (49%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ-I 194
             ++LRI + L    SR+  D  L + LR L+   +T+  L+ T IG +VNG+RKH + + +
Sbjct:     6 DLLRIAKKLDKMVSRNNMDGAL-DLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDV 64

Query:   195 RHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDE-----LAFF 249
              +LA+ LI+ WK L++   N          +  +PS         SP  D      + FF
Sbjct:    65 VNLAKILIKNWKRLLESAQNPKSERPNEVKNGSHPSKPSGSPSRTSPEKDSRKDAPVDFF 124

Query:   250 TGPS 253
               PS
Sbjct:   125 PPPS 128


>MGI|MGI:107368 [details] [associations]
            symbol:Tcea2 "transcription elongation factor A (SII), 2"
            species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003746
            "translation elongation factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006414 "translational elongation" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001222 InterPro:IPR003617
            InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
            InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
            Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133
            PROSITE:PS51319 PROSITE:PS51321 SMART:SM00440 SMART:SM00509
            SMART:SM00510 MGI:MGI:107368 GO:GO:0005634 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
            Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 eggNOG:COG1594 HOGENOM:HOG000195015
            HOVERGEN:HBG055022 KO:K03145 OrthoDB:EOG4SN1PH TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 CTD:6919 EMBL:D86081 EMBL:AB010271
            IPI:IPI00284630 PIR:JC5430 RefSeq:NP_033352.1 UniGene:Mm.24245
            ProteinModelPortal:Q9QVN7 SMR:Q9QVN7 STRING:Q9QVN7
            PhosphoSite:Q9QVN7 PaxDb:Q9QVN7 PRIDE:Q9QVN7
            Ensembl:ENSMUST00000103042 GeneID:21400 KEGG:mmu:21400
            InParanoid:Q9QVN7 OMA:SKWRNEV NextBio:300660 Bgee:Q9QVN7
            CleanEx:MM_TCEA2 Genevestigator:Q9QVN7
            GermOnline:ENSMUSG00000059540 Uniprot:Q9QVN7
        Length = 299

 Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
 Identities = 30/90 (33%), Positives = 52/90 (57%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+ RI   L    +R  ++  + + LR L+ M +T+  L++T +G +VN LRK  S +++
Sbjct:     6 EIARIARRLDKMVTRKNAEGAM-DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEEL 64

Query:   195 RHLARTLIEGWKDLVDEWVNATKAIAEGTP 224
               LA++LI+ WK L+D     ++    GTP
Sbjct:    65 IALAKSLIKSWKKLLDVSDGKSRNQGRGTP 94


>RGD|61825 [details] [associations]
            symbol:Tcea2 "transcription elongation factor A (SII), 2"
           species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
           evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;TAS]
           [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0006351
           "transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
           of transcription from RNA polymerase II promoter" evidence=IEA]
           [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032784 "regulation
           of DNA-dependent transcription, elongation" evidence=IEA]
           [GO:0045944 "positive regulation of transcription from RNA
           polymerase II promoter" evidence=IDA] [GO:0005730 "nucleolus"
           evidence=ISO] InterPro:IPR001222 InterPro:IPR003617
           InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
           InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
           Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133
           PROSITE:PS51319 PROSITE:PS51321 SMART:SM00440 SMART:SM00509
           SMART:SM00510 RGD:61825 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
           GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.472.30
           SUPFAM:SSF46942 Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784
           eggNOG:COG1594 HOGENOM:HOG000195015 HOVERGEN:HBG055022 KO:K03145
           OrthoDB:EOG4SN1PH TIGRFAMs:TIGR01385 GeneTree:ENSGT00390000017794
           CTD:6919 EMBL:D12927 IPI:IPI00339171 PIR:A53004 RefSeq:NP_476439.1
           UniGene:Rn.78891 ProteinModelPortal:Q63799 SMR:Q63799 PRIDE:Q63799
           Ensembl:ENSRNOT00000022073 GeneID:29575 KEGG:rno:29575
           UCSC:RGD:61825 InParanoid:Q63799 NextBio:609666 ArrayExpress:Q63799
           Genevestigator:Q63799 GermOnline:ENSRNOG00000016288 Uniprot:Q63799
        Length = 299

 Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
 Identities = 30/90 (33%), Positives = 52/90 (57%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+ RI   L    +R  ++  + + LR L+ M +T+  L++T +G +VN LRK  S +++
Sbjct:     6 EIARIARRLDKMVTRKNAEGAM-DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEEL 64

Query:   195 RHLARTLIEGWKDLVDEWVNATKAIAEGTP 224
               LA++LI+ WK L+D     ++    GTP
Sbjct:    65 IALAKSLIKSWKKLLDVSDGKSRDQGRGTP 94


>UNIPROTKB|Q63799 [details] [associations]
            symbol:Tcea2 "Transcription elongation factor A protein 2"
            species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IEA] InterPro:IPR001222
            InterPro:IPR003617 InterPro:IPR003618 InterPro:IPR006289
            InterPro:IPR016492 InterPro:IPR017890 InterPro:IPR017923
            Pfam:PF01096 Pfam:PF07500 Pfam:PF08711 PIRSF:PIRSF006704
            PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319 PROSITE:PS51321
            SMART:SM00440 SMART:SM00509 SMART:SM00510 RGD:61825 GO:GO:0005634
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0045944
            GO:GO:0006351 Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 eggNOG:COG1594 HOGENOM:HOG000195015
            HOVERGEN:HBG055022 KO:K03145 OrthoDB:EOG4SN1PH TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 CTD:6919 EMBL:D12927 IPI:IPI00339171
            PIR:A53004 RefSeq:NP_476439.1 UniGene:Rn.78891
            ProteinModelPortal:Q63799 SMR:Q63799 PRIDE:Q63799
            Ensembl:ENSRNOT00000022073 GeneID:29575 KEGG:rno:29575
            UCSC:RGD:61825 InParanoid:Q63799 NextBio:609666 ArrayExpress:Q63799
            Genevestigator:Q63799 GermOnline:ENSRNOG00000016288 Uniprot:Q63799
        Length = 299

 Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
 Identities = 30/90 (33%), Positives = 52/90 (57%)

Query:   138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
             E+ RI   L    +R  ++  + + LR L+ M +T+  L++T +G +VN LRK  S +++
Sbjct:     6 EIARIARRLDKMVTRKNAEGAM-DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEEL 64

Query:   195 RHLARTLIEGWKDLVDEWVNATKAIAEGTP 224
               LA++LI+ WK L+D     ++    GTP
Sbjct:    65 IALAKSLIKSWKKLLDVSDGKSRDQGRGTP 94


>UNIPROTKB|E5RJ93 [details] [associations]
            symbol:TCEA1 "Transcription elongation factor A protein 1"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003617 InterPro:IPR017923
            Pfam:PF08711 PROSITE:PS51319 SMART:SM00509 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.20.930.10 SUPFAM:SSF47676
            EMBL:AC100821 HGNC:HGNC:11612 IPI:IPI00974396
            ProteinModelPortal:E5RJ93 SMR:E5RJ93 Ensembl:ENST00000518784
            ArrayExpress:E5RJ93 Bgee:E5RJ93 Uniprot:E5RJ93
        Length = 90

 Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/74 (28%), Positives = 46/74 (62%)

Query:   138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
             EV+R  + +     + ++    + L+ L+ + +T++ L++T IG +VN +RK  + +++ 
Sbjct:     4 EVVRFAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63

Query:   196 HLARTLIEGWKDLV 209
              LA++LI+ WK L+
Sbjct:    64 SLAKSLIKSWKKLL 77


>UNIPROTKB|Q86VL0 [details] [associations]
            symbol:TCEA2 "TCEA2 protein" species:9606 "Homo sapiens"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0032784 "regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0003746 "translation elongation factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
            InterPro:IPR003617 InterPro:IPR003618 InterPro:IPR016492
            InterPro:IPR017923 Pfam:PF07500 Pfam:PF08711 PIRSF:PIRSF006704
            PROSITE:PS51319 SMART:SM00509 GO:GO:0005634 GO:GO:0005813
            EMBL:CH471077 GO:GO:0003677 GO:GO:0006357 GO:GO:0006351
            GO:GO:0003746 Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 EMBL:AL590548 EMBL:AL355803 KO:K03145
            CTD:6919 RefSeq:NP_003186.1 UniGene:Hs.505004 UniGene:Hs.736326
            DNASU:6919 GeneID:6919 KEGG:hsa:6919 HGNC:HGNC:11614
            GenomeRNAi:6919 NextBio:27067 IPI:IPI00384330 EMBL:BC050623
            SMR:Q86VL0 MINT:MINT-1379539 STRING:Q86VL0 Ensembl:ENST00000395053
            Uniprot:Q86VL0
        Length = 242

 Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query:   138 EVLRIKEILHNS-RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
             E+ RI   L      +S     + LR L+ M +T+  L++T +G +VN LRK  S +++ 
Sbjct:     7 EIARIARRLDKMVTKKSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVI 66

Query:   196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSP 241
              LA++LI+ WK L+D   +  KA   G    +  S  D  E  P P
Sbjct:    67 ALAKSLIKSWKKLLD--ASDAKARERGRGMPLPTSSRDASEA-PDP 109


>UNIPROTKB|Q15560 [details] [associations]
            symbol:TCEA2 "Transcription elongation factor A protein 2"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=NAS] [GO:0006354 "DNA-dependent
            transcription, elongation" evidence=NAS] [GO:0008023 "transcription
            elongation factor complex" evidence=NAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005813 "centrosome"
            evidence=IDA] InterPro:IPR001222 InterPro:IPR003617
            InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
            InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
            Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133
            PROSITE:PS51319 PROSITE:PS51321 SMART:SM00440 SMART:SM00509
            SMART:SM00510 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006357 Gene3D:1.10.472.30 SUPFAM:SSF46942
            GO:GO:0008023 GO:GO:0006354 Gene3D:1.20.930.10 SUPFAM:SSF47676
            GO:GO:0032784 EMBL:AL590548 eggNOG:COG1594 HOGENOM:HOG000195015
            HOVERGEN:HBG055022 KO:K03145 TIGRFAMs:TIGR01385 CTD:6919
            EMBL:D50495 EMBL:BC018896 EMBL:U86749 IPI:IPI00018403 PIR:JC4577
            RefSeq:NP_003186.1 RefSeq:NP_942016.1 UniGene:Hs.505004
            UniGene:Hs.736326 PDB:2LW4 PDBsum:2LW4 ProteinModelPortal:Q15560
            SMR:Q15560 IntAct:Q15560 STRING:Q15560 PhosphoSite:Q15560
            DMDM:28380177 PaxDb:Q15560 PRIDE:Q15560 DNASU:6919
            Ensembl:ENST00000343484 Ensembl:ENST00000361317
            Ensembl:ENST00000458442 GeneID:6919 KEGG:hsa:6919 UCSC:uc021wgp.1
            GeneCards:GC20P062681 H-InvDB:HIX0174737 HGNC:HGNC:11614
            HPA:HPA043836 MIM:604784 neXtProt:NX_Q15560 PharmGKB:PA36373
            OMA:AVGADCE GenomeRNAi:6919 NextBio:27067 ArrayExpress:Q15560
            Bgee:Q15560 CleanEx:HS_TCEA2 Genevestigator:Q15560
            GermOnline:ENSG00000171703 Uniprot:Q15560
        Length = 299

 Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query:   138 EVLRIKEILHNS-RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
             E+ RI   L      +S     + LR L+ M +T+  L++T +G +VN LRK  S +++ 
Sbjct:     7 EIARIARRLDKMVTKKSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVI 66

Query:   196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSP 241
              LA++LI+ WK L+D   +  KA   G    +  S  D  E  P P
Sbjct:    67 ALAKSLIKSWKKLLD--ASDAKARERGRGMPLPTSSRDASEA-PDP 109


>UNIPROTKB|Q5JRI7 [details] [associations]
            symbol:TCEA2 "Transcription elongation factor A protein 2"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR003618 InterPro:IPR006289
            InterPro:IPR016492 InterPro:IPR017890 InterPro:IPR017923
            Pfam:PF07500 Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00510 GO:GO:0005634 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0003746
            Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 EMBL:AL590548 EMBL:AL355803
            HOGENOM:HOG000195015 HOVERGEN:HBG055022 TIGRFAMs:TIGR01385
            UniGene:Hs.505004 UniGene:Hs.736326 HGNC:HGNC:11614 IPI:IPI00647399
            SMR:Q5JRI7 STRING:Q5JRI7 Ensembl:ENST00000339217
            Ensembl:ENST00000440819 Uniprot:Q5JRI7
        Length = 246

 Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
 Identities = 30/82 (36%), Positives = 46/82 (56%)

Query:   161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
             LR L+ M +T+  L++T +G +VN LRK  S +++  LA++LI+ WK L+D   +  KA 
Sbjct:     4 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD--ASDAKAR 61

Query:   220 AEGTPDSVNPSVVDEEEGLPSP 241
               G    +  S  D  E  P P
Sbjct:    62 ERGRGMPLPTSSRDASEA-PDP 82


>ZFIN|ZDB-GENE-070705-486 [details] [associations]
            symbol:tceanc2 "transcription elongation factor A
            (SII) N-terminal and central domain containing 2" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR003618 InterPro:IPR017923 Pfam:PF08711
            PROSITE:PS51319 PROSITE:PS51321 ZFIN:ZDB-GENE-070705-486
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.472.30
            Gene3D:1.20.930.10 SUPFAM:SSF47676 EMBL:CR450845 CTD:127428
            eggNOG:NOG309610 HOGENOM:HOG000008018 HOVERGEN:HBG058410
            OrthoDB:EOG44QT23 IPI:IPI00805701 RefSeq:XP_696087.1
            UniGene:Dr.86550 ProteinModelPortal:B0UYI1
            Ensembl:ENSDART00000091497 GeneID:567698 KEGG:dre:567698
            GeneTree:ENSGT00390000014384 OMA:REVYTEW NextBio:20888801
            Bgee:B0UYI1 Uniprot:B0UYI1
        Length = 210

 Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
 Identities = 25/81 (30%), Positives = 45/81 (55%)

Query:   135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-Q 193
             V+ ++ R K IL       ++++ E+L+ L     + + LK+T IG  VN LRKH    +
Sbjct:    37 VIEDIERYKSILELPGQPKENMI-EALKELDKKVPSREVLKSTRIGHTVNNLRKHSDDPE 95

Query:   194 IRHLARTLIEGWKDLVDEWVN 214
             I+ LA+ + + W+  ++E  N
Sbjct:    96 IKSLAKEVYKHWRTFIEEHAN 116


>DICTYBASE|DDB_G0278241 [details] [associations]
            symbol:tcea1 "RNA polymerase II elongation factor"
            species:44689 "Dictyostelium discoideum" [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006368 "transcription elongation from RNA polymerase II
            promoter" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003618 InterPro:IPR016492
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 dictyBase:DDB_G0278241 GO:GO:0005654
            GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677
            EMBL:AAFI02000023 GO:GO:0008270 GO:GO:0006357 GO:GO:0006368
            Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 eggNOG:COG1594 KO:K03145
            RefSeq:XP_642233.1 HSSP:P23193 ProteinModelPortal:Q54YG9 SMR:Q54YG9
            STRING:Q54YG9 EnsemblProtists:DDB0216299 GeneID:8621441
            KEGG:ddi:DDB_G0278241 OMA:LEIWKKV Uniprot:Q54YG9
        Length = 319

 Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
 Identities = 34/108 (31%), Positives = 54/108 (50%)

Query:   138 EVLRIKEILHNS-RD-ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIR 195
             E+++ +E L  + +D E D  L E L+  +   +T D LK+T+IGK+V  LR H    I 
Sbjct:     3 EIIKCREQLEKAIKDGEFDKAL-ECLKNAKNFKITKDLLKSTDIGKSVGKLRAHKDIGIS 61

Query:   196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPL 243
               ++ LI+ WK  + E  +AT   +  +  S   S    +   PS  L
Sbjct:    62 SQSKELIDKWKQDI-EGTSATTTSSSSSSSSSTTSTTTTKTASPSESL 108


>TAIR|locus:2064195 [details] [associations]
            symbol:TFIIS "transcript elongation factor IIS"
            species:3702 "Arabidopsis thaliana" [GO:0003674
            "molecular_function" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0003746 "translation elongation factor
            activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006354 "DNA-dependent
            transcription, elongation" evidence=IEA;ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;ISS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0032784 "regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0009910 "negative
            regulation of flower development" evidence=IMP] [GO:0010162 "seed
            dormancy process" evidence=RCA;IMP] [GO:0034243 "regulation of
            transcription elongation from RNA polymerase II promoter"
            evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0000394 "RNA
            splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
            [GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=RCA] [GO:0009845
            "seed germination" evidence=IMP;RCA] [GO:0009880 "embryonic pattern
            specification" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0009933 "meristem structural
            organization" evidence=RCA] [GO:0010072 "primary shoot apical
            meristem specification" evidence=RCA] [GO:0010182 "sugar mediated
            signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
            reproductive phase transition of meristem" evidence=RCA]
            [GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
            of cell cycle process" evidence=RCA] [GO:0016567 "protein
            ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
            evidence=RCA] [GO:0045595 "regulation of cell differentiation"
            evidence=RCA] [GO:0048366 "leaf development" evidence=RCA]
            [GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
            "response to freezing" evidence=RCA] [GO:0051301 "cell division"
            evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
            evidence=IMP] InterPro:IPR001222 InterPro:IPR003617
            InterPro:IPR003618 InterPro:IPR006289 InterPro:IPR016492
            InterPro:IPR017890 InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500
            Pfam:PF08711 PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133
            PROSITE:PS51319 PROSITE:PS51321 SMART:SM00440 SMART:SM00509
            SMART:SM00510 GO:GO:0005634 EMBL:CP002685 GO:GO:0003677
            GO:GO:0008270 GO:GO:0006351 GO:GO:0009739 GO:GO:0009845
            GO:GO:0003746 GO:GO:0009910 EMBL:AC005499 GO:GO:0010162
            Gene3D:1.10.472.30 SUPFAM:SSF46942 GO:GO:0034243 Gene3D:1.20.930.10
            SUPFAM:SSF47676 KO:K03145 TIGRFAMs:TIGR01385 HSSP:P23193
            OMA:LEIWKKV UniGene:At.13130 EMBL:AY150517 EMBL:AK117557
            IPI:IPI00532116 PIR:E84806 RefSeq:NP_181390.1
            ProteinModelPortal:Q9ZVH8 SMR:Q9ZVH8 IntAct:Q9ZVH8 STRING:Q9ZVH8
            PRIDE:Q9ZVH8 EnsemblPlants:AT2G38560.1 GeneID:818438
            KEGG:ath:AT2G38560 TAIR:At2g38560 InParanoid:Q9ZVH8
            PhylomeDB:Q9ZVH8 ProtClustDB:CLSN2683212 Genevestigator:Q9ZVH8
            Uniprot:Q9ZVH8
        Length = 378

 Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
 Identities = 31/89 (34%), Positives = 47/89 (52%)

Query:   155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEWV 213
             S   ++L++L+   +T DTL AT++GK +  L KH  + I+ +A  L+E WK +V +E  
Sbjct:    32 SQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEETA 91

Query:   214 NATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
              A K   EGT       V   +   PS P
Sbjct:    92 KAKKT--EGTNGCKEAKVNKMDVEKPSNP 118


>UNIPROTKB|G3N2S6 [details] [associations]
            symbol:TCEB3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003617 InterPro:IPR010684
            InterPro:IPR017923 Pfam:PF06881 Pfam:PF08711 PROSITE:PS51319
            SMART:SM00509 GO:GO:0016021 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:1.20.930.10 SUPFAM:SSF47676
            GeneTree:ENSGT00390000002428 OMA:WKVHCHR EMBL:DAAA02006428
            Ensembl:ENSBTAT00000063789 Uniprot:G3N2S6
        Length = 803

 Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
 Identities = 34/93 (36%), Positives = 50/93 (53%)

Query:   117 SSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKA 176
             SSG+ A  +T    E +  V E L+ +  L  + D     L + L++L  + +TVD L  
Sbjct:    16 SSGEEAAPVTAMAAESALQVVEKLQAR--LATNADPKK--LLKYLKKLSALPITVDILAE 71

Query:   177 TEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
             T +GK VN LRKH  + + + AR L+  WK LV
Sbjct:    72 TGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 102


>ZFIN|ZDB-GENE-040426-985 [details] [associations]
            symbol:tcea2 "transcription elongation factor A
            (SII), 2" species:7955 "Danio rerio" [GO:0032784 "regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003746 "translation elongation factor activity"
            evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
            InterPro:IPR001222 InterPro:IPR003617 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00509 SMART:SM00510
            ZFIN:ZDB-GENE-040426-985 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.472.30 SUPFAM:SSF46942
            Gene3D:1.20.930.10 SUPFAM:SSF47676 GO:GO:0032784 TIGRFAMs:TIGR01385
            GeneTree:ENSGT00390000017794 EMBL:CR457456 EMBL:CT025851
            IPI:IPI00495893 Ensembl:ENSDART00000014222 ArrayExpress:F1QTS2
            Bgee:F1QTS2 Uniprot:F1QTS2
        Length = 301

 Score = 114 (45.2 bits), Expect = 0.00043, P = 0.00043
 Identities = 23/71 (32%), Positives = 50/71 (70%)

Query:   141 RIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLAR 199
             ++ +++H  +  +D  + + L+ L+ M ++++TL++T IG +VN +RK  S ++++ LA+
Sbjct:    13 KLDKMVH--KKNTDGAI-DLLQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAK 69

Query:   200 TLIEGWKDLVD 210
             +LI+ WK L+D
Sbjct:    70 SLIKAWKKLLD 80


>UNIPROTKB|D4A6D1 [details] [associations]
            symbol:Tcea2 "Transcription elongation factor A protein 2"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0032784 "regulation of DNA-dependent transcription, elongation"
            evidence=IEA] InterPro:IPR001222 InterPro:IPR003618
            InterPro:IPR006289 InterPro:IPR016492 InterPro:IPR017890
            InterPro:IPR017923 Pfam:PF01096 Pfam:PF07500 Pfam:PF08711
            PIRSF:PIRSF006704 PROSITE:PS00466 PROSITE:PS51133 PROSITE:PS51319
            PROSITE:PS51321 SMART:SM00440 SMART:SM00510 RGD:61825 GO:GO:0005634
            GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
            Gene3D:1.10.472.30 SUPFAM:SSF46942 Gene3D:1.20.930.10
            SUPFAM:SSF47676 GO:GO:0032784 TIGRFAMs:TIGR01385 IPI:IPI00950445
            Ensembl:ENSRNOT00000064494 ArrayExpress:D4A6D1 Uniprot:D4A6D1
        Length = 273

 Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
 Identities = 25/65 (38%), Positives = 41/65 (63%)

Query:   161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
             LR L+ M +T+  L++T +G +VN LRK  S +++  LA++LI+ WK L+D     ++  
Sbjct:     4 LRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRDQ 63

Query:   220 AEGTP 224
               GTP
Sbjct:    64 GRGTP 68


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      317       317   0.00083  116 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  34
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  222 KB (2121 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.15u 0.17s 28.32t   Elapsed:  00:00:02
  Total cpu time:  28.16u 0.17s 28.33t   Elapsed:  00:00:02
  Start:  Sat May 11 01:09:52 2013   End:  Sat May 11 01:09:54 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT5G05140 AT5G05140 AT5G05140	protein from Arabidopsis thaliana	3.2e-72
BLAST match view associations BLAST with AT5G09850 AT5G09850 AT5G09850	protein from Arabidopsis thaliana	5.5e-22
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Rhabdomyosarcoma antigen MU-RMS-40.22	protein from Homo sapiens	2.4e-07
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Canis lupus familiaris	3.9e-07
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	3.8e-06
BLAST match view associations BLAST with tcea1 tcea1 tcea1 transcription elongation factor A (SII), 1	gene_product from Danio rerio	1.2e-05
BLAST match view associations BLAST with Tcea3 Tcea3 Tcea3 transcription elongation factor A (SII), 3	protein from Mus musculus	1.5e-05
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Uncharacterized protein	protein from Gallus gallus	2.6e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Transcription elongation factor A N-terminal and central domain-containing protein 2	protein from Bos taurus	2.9e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Transcription elongation factor A N-terminal and central domain-containing protein 2	protein from Bos taurus	2.9e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Transcription elongation factor A N-terminal and central domain-containing protein 2	protein from Homo sapiens	2.9e-05
BLAST match view associations BLAST with Tcea3 Tcea3 Tcea3 transcription elongation factor A (SII), 3	gene from Rattus norvegicus	3.3e-05
BLAST match view associations BLAST with TCEA1 TCEA1 TCEA1 Transcription elongation factor A protein 1	protein from Homo sapiens	3.7e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Transcription elongation factor A protein 3	protein from Homo sapiens	4.2e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Sus scrofa	4.8e-05
BLAST match view associations BLAST with TCEANC2 TCEANC2 TCEANC2 Uncharacterized protein	protein from Sus scrofa	5.2e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Transcription elongation factor A protein 3	protein from Bos taurus	5.6e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Transcription elongation factor A protein 3	protein from Bos taurus	5.6e-05
BLAST match view associations BLAST with TCEA3 TCEA3 TCEA3 Uncharacterized protein	protein from Canis lupus familiaris	7.2e-05
BLAST match view associations BLAST with tcea3 tcea3 tcea3 transcription elongation factor A (SII), 3	gene_product from Danio rerio	0.00012
BLAST match view associations BLAST with Tcea2 Tcea2 Tcea2 transcription elongation factor A (SII), 2	protein from Mus musculus	0.00015
BLAST match view associations BLAST with Tcea2 Tcea2 Tcea2 transcription elongation factor A (SII), 2	gene from Rattus norvegicus	0.00015
BLAST match view associations BLAST with TCEA1 TCEA1 TCEA1 Transcription elongation factor A protein 1	protein from Homo sapiens	0.00017
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	0.00020
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	0.00033
BLAST match view associations BLAST with TCEA2 TCEA2 TCEA2 Transcription elongation factor A protein 2	protein from Homo sapiens	0.00035
BLAST match view associations BLAST with tceanc2 tceanc2 tceanc2 transcription elongation factor A (SII) N-terminal and central domain containing 2	gene_product from Danio rerio	0.00037
BLAST match view associations BLAST with tcea1 tcea1 tcea1 RNA polymerase II elongation factor	gene from Dictyostelium discoideum	0.00038
BLAST match view associations BLAST with TFIIS TFIIS TFIIS transcript elongation factor IIS	protein from Arabidopsis thaliana	0.00039
BLAST match view associations BLAST with TCEB3 TCEB3 TCEB3 Uncharacterized protein	protein from Bos taurus	0.00042
BLAST match view associations BLAST with tcea2 tcea2 tcea2 transcription elongation factor A (SII), 2	gene_product from Danio rerio	0.00043