BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021095
(317 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255552481|ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical protein [Ricinus communis]
Length = 473
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 229/289 (79%), Gaps = 30/289 (10%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WRNYFR+AN DIF IIDHA+MVAA DCPKEF+LRRDRIAE+LF+C+LTRCSG
Sbjct: 1 MKSVSLDYWRNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTRCSG 60
Query: 63 CDRVELAVPSGNEFDDDEEDCKR----------------DGCEFEAGG-SKESKVNSC-- 103
C+ V+LAVP+ +DD CKR D CEFEAGG SKESKVNS
Sbjct: 61 CNHVDLAVPAHEGENDDGGACKRRDDHHVEDDDDDDVDIDVCEFEAGGTSKESKVNSSNN 120
Query: 104 RDDH--------VSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDS 155
RDD+ V++Q++SNFS G+ AEALTDEIEEES VVGEVLRIK+IL +SRDES+S
Sbjct: 121 RDDNDIDIGEVNVNDQLLSNFSYGE-AEALTDEIEEESMVVGEVLRIKDILLHSRDESES 179
Query: 156 VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS+QIRHLAR LI+GWK LVDEW +
Sbjct: 180 VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHLARVLIDGWKVLVDEWYST 239
Query: 216 TKAIA--EGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
TKAI EGTP+SVNPSVVDEE+GLPSPPLDE FF + GIEL+Q F
Sbjct: 240 TKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFFAAQNTGIELAQFF 288
>gi|224139692|ref|XP_002323230.1| predicted protein [Populus trichocarpa]
gi|222867860|gb|EEF04991.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 194/293 (66%), Positives = 221/293 (75%), Gaps = 34/293 (11%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WR+YFR+A+ DIF IIDHA++VAA DCPKEFKLRRDRIAE+LF+C+L +CSG
Sbjct: 1 MKSVSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSG 60
Query: 63 CDRVELAVPSGNEFDDDEEDC--KR---------------------DGCEFEAGGSKESK 99
C++VELAVP +E + D+ C KR G E+E GGSKESK
Sbjct: 61 CNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESK 120
Query: 100 VNSCRDDH--------VSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRD 151
VNS D+ V++Q+VSNFS G+ AEALTDEIEE SQ V EVLRIK+IL+NS+D
Sbjct: 121 VNSSNRDNDFDNGEVNVNDQLVSNFSFGE-AEALTDEIEEVSQTVDEVLRIKDILYNSQD 179
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
ESDSVL ESLR+L+LMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIE WK LVDE
Sbjct: 180 ESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEDWKVLVDE 239
Query: 212 WVNATKAIA--EGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
W +A I EGTPDSVNPSVVDEEEGLPSPPLDE AFF +ELSQ F
Sbjct: 240 WYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFF 292
>gi|449437690|ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 452
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 192/276 (69%), Positives = 217/276 (78%), Gaps = 15/276 (5%)
Query: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
M+ KSGSLD+WRNYFR+AN DIF IID+A++VAA DCPKEF+LRRDRIAE+LF+C+LTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 SGCDRVELAVPSGNEFDDDE----EDCKRDGCEFEAGGSKESKVNSCRDD--HVSNQIVS 114
GCDRVELAV + DD E D RDGCEFEAGGSKESKV S RDD ++ VS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 115 NFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTL 174
NFS G+ AEALTDEIE+ESQ+VGEVLRIKEIL+N DESD VLFESLRRL+LMAL+VDTL
Sbjct: 121 NFSFGE-AEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTL 179
Query: 175 KATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI--AEGTPDSVNPSVV 232
+ATEIGKAVN LRKHGSK+IRHLAR LI WK++VD WV AT A+ AE TPDS N S
Sbjct: 180 QATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAA 239
Query: 233 ------DEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
EEEGLPSPPLDE AFFT +ELSQ F
Sbjct: 240 VKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFF 275
>gi|224139684|ref|XP_002323227.1| predicted protein [Populus trichocarpa]
gi|222867857|gb|EEF04988.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/299 (64%), Positives = 221/299 (73%), Gaps = 40/299 (13%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WR+YFR+A+ DIF IIDHA++VAA DCPKEFKLRRDRIAE+LF+C+L +CSG
Sbjct: 1 MKSVSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSG 60
Query: 63 CDRVELAVPSGNEFDDDEEDC--KR---------------------DGCEFEAGGSKESK 99
C++VELAVP +E + D+ C KR G E+E GGSKESK
Sbjct: 61 CNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESK 120
Query: 100 VNSCRDDH--------VSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRD 151
VNS D+ V++Q+VSNFS G+ AEALTDEIEE SQ V EVLRIK+IL+NS+D
Sbjct: 121 VNSSNRDNDFDNGEVNVNDQLVSNFSFGE-AEALTDEIEEVSQTVDEVLRIKDILYNSQD 179
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
ESDSVL ESLR+L+LMALTVDTLKATEIGKAVNGLRKHGS+QIRHLARTLIE WK LVDE
Sbjct: 180 ESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSEQIRHLARTLIEDWKVLVDE 239
Query: 212 WVNATKAIA--------EGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
W +A I EGTPDSVNPSVVDEEEGLPSPPLDE AFF +ELSQ F
Sbjct: 240 WYSAANVIRGRNLLASNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFF 298
>gi|359481563|ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/270 (68%), Positives = 216/270 (80%), Gaps = 17/270 (6%)
Query: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
M+ SG+LD WRNYFR+AN DIF II+HA++VAA DCPKEF+LRRDRIAE+LF+CKLTRC
Sbjct: 1 MATNSGALDQWRNYFRTANSDIFGIIEHAILVAASDCPKEFRLRRDRIAERLFSCKLTRC 60
Query: 61 SGCDRVELAVPSGNEFDDDEEDCKRDGCEFEA---GGSKESKVNSCRDDH--VSNQIVSN 115
GCDRVELAVP ++D CK EF+ SKESK NS R+DH ++ VSN
Sbjct: 61 FGCDRVELAVP-----ENDGGGCK---IEFDMDVNSSSKESKANSIREDHGEMNMNQVSN 112
Query: 116 FSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLK 175
+S G+ AEALTDEIEEE+Q+ GEVLRI+EIL +S+DESDSVLF+SLRRLQLM L+VD LK
Sbjct: 113 YSYGE-AEALTDEIEEETQIAGEVLRIREILEHSKDESDSVLFDSLRRLQLMVLSVDNLK 171
Query: 176 ATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPS---VV 232
ATEIGKAVNGLRKHGSKQIR LARTLI+ WKD+VDEWVNAT AIAEGTPDSVNPS
Sbjct: 172 ATEIGKAVNGLRKHGSKQIRQLARTLIDEWKDMVDEWVNATAAIAEGTPDSVNPSVVDDD 231
Query: 233 DEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
D+EEGLP PP+DEL+F T +ELSQ F
Sbjct: 232 DDEEGLPFPPMDELSFLTTQPTSLELSQFF 261
>gi|224089941|ref|XP_002308874.1| predicted protein [Populus trichocarpa]
gi|222854850|gb|EEE92397.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/299 (64%), Positives = 217/299 (72%), Gaps = 40/299 (13%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WRNYFR+A+ DIF IIDHA++VAA DCPKEFKLRRDRIAE+LF+C+L +CSG
Sbjct: 1 MKSVSLDYWRNYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSG 60
Query: 63 CDRVELAVPSGNEFDDDEEDC--KR---------------------------DGCEFEAG 93
C+RVELAVP +E D+ C KR G E+E G
Sbjct: 61 CNRVELAVPGHDEGVSDDGGCCSKRRDGDNSGGVGGGGDDDDDDDVDIDIDDGGFEYEGG 120
Query: 94 GSKESKVNSCRDDH--------VSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEI 145
GSK SKVNS D+ V++Q+V NFS GD AEALTDEIEE SQ V EVLRIK+I
Sbjct: 121 GSKGSKVNSSNRDNDIDNGEVNVNDQLVYNFSYGD-AEALTDEIEEVSQTVDEVLRIKDI 179
Query: 146 LHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
L+NS+DESDSVL ESLR+L+LMALTVDTLKATEIGKAVN LRKHGSKQIR+LARTLIE W
Sbjct: 180 LYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNVLRKHGSKQIRYLARTLIEDW 239
Query: 206 KDLVDEWVNATKAIA--EGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
K LVDEW + AI EGTPDSVNPSVVDEEEGLPSPPLDE AFF +ELSQ F
Sbjct: 240 KVLVDEWYSTANAIRGDEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFF 298
>gi|255647376|gb|ACU24154.1| unknown [Glycine max]
Length = 336
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/272 (67%), Positives = 209/272 (76%), Gaps = 11/272 (4%)
Query: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
M M GSLD WRNYF +AN DIF IIDHA+MVAA DCPKEF LRRD IAE+LF+C+L+RC
Sbjct: 1 MRMNKGSLDYWRNYFGAANSDIFGIIDHAIMVAASDCPKEFTLRRDGIAERLFSCRLSRC 60
Query: 61 SGCDRVELAVPSGNEFDDDEEDCKR----DGCEF--EAGGSKESKVNSCRD--DHVSNQI 112
GC+RVELAVP ++ D E CK DG EF EAG SKESKVNS RD ++
Sbjct: 61 LGCERVELAVPVDDDDDGGGEGCKSGFDGDGDEFKFEAGASKESKVNSARDYPGEMNTNQ 120
Query: 113 VSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVD 172
VSN+S G+ AEALTDEIE+ESQ V EV RIK+I N +ESD+VLF+SLRRLQLM LTVD
Sbjct: 121 VSNYSYGE-AEALTDEIEKESQYVEEVFRIKDIFLNYEEESDTVLFDSLRRLQLMELTVD 179
Query: 173 TLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA--EGTPDSVNPS 230
LKATEIGKAVN LRKHGS+ I LARTLI+GWK +VDEWV T AIA EGTPDSVNPS
Sbjct: 180 LLKATEIGKAVNPLRKHGSRDICQLARTLIDGWKQMVDEWVKDTTAIAGSEGTPDSVNPS 239
Query: 231 VVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
VVD+EEGLPSPP+DE A F P+ +ELSQ F
Sbjct: 240 VVDDEEGLPSPPMDEGALFAAPTGSMELSQFF 271
>gi|356504664|ref|XP_003521115.1| PREDICTED: uncharacterized protein LOC100817835 [Glycine max]
Length = 452
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/273 (67%), Positives = 213/273 (78%), Gaps = 19/273 (6%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WRNYF SAN DIF+II+HA++VAA DCPKEF++RRD IAE+LF+C+LTRC G
Sbjct: 1 MKSWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVG 60
Query: 63 CDRVELAVPS--------GNEFDDDEEDCKRDGCEFE-AGGSKESKVNSCRDDHVSNQIV 113
CDRVELAV + G++ D+D+ +RDG EFE AG SKESKVN +N
Sbjct: 61 CDRVELAVGADSKKEKHDGDDGDNDKSGFERDGVEFEGAGASKESKVNGD-----ANLGD 115
Query: 114 SNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDT 173
SN+S G+ AEAL+DE+EEESQ V E+LRIK++L N DES++V+FESLRRLQLM LTVD
Sbjct: 116 SNYSFGE-AEALSDEMEEESQYVAEILRIKDVLLNPEDESEAVIFESLRRLQLMELTVDC 174
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA--TKAIAEGTPDSVNPSV 231
LKATEIGKAVN LRKHGSK IR LARTLI GWK++VDEWV A T AI EGTPDSVNPSV
Sbjct: 175 LKATEIGKAVNPLRKHGSKDIRQLARTLINGWKEMVDEWVKATTTTAITEGTPDSVNPSV 234
Query: 232 V--DEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
V DEEEGLPSPPLDE AFF + +ELSQ F
Sbjct: 235 VDDDEEEGLPSPPLDEGAFFVTQAGSMELSQFF 267
>gi|356571901|ref|XP_003554109.1| PREDICTED: uncharacterized protein LOC100799367 [Glycine max]
Length = 458
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/278 (64%), Positives = 214/278 (76%), Gaps = 22/278 (7%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WR YF SAN DIF+II+HA++VAA DCPKEF++RRD IAE+LF+C+LTRC G
Sbjct: 1 MKSWSLDEWRKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAERLFSCRLTRCVG 60
Query: 63 CDRVELAVPSGNE--------FDDDEEDCKRDGCEFE-AGGSKESKVNS--CRDDHVSNQ 111
CDRVELAV + ++ D+D+ +RDG EFE AG SKESKVN RD ++ +
Sbjct: 61 CDRVELAVGADSKEKHDGDGDDDNDKSGYERDGVEFEGAGASKESKVNGDGGRDVNLGD- 119
Query: 112 IVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTV 171
SN+S G+ AEAL+DE+EEES+ V E+LRI+++L N DES++VLF+SLRRLQLM LTV
Sbjct: 120 --SNYSFGE-AEALSDEMEEESRYVAEILRIRDVLLNPEDESEAVLFDSLRRLQLMELTV 176
Query: 172 DTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA-----EGTPDS 226
D LKATEIGKAVN LRKHGSK IR L+RTLI+GWK++VDEWV AT A EGTPDS
Sbjct: 177 DCLKATEIGKAVNPLRKHGSKDIRQLSRTLIDGWKEMVDEWVKATTTTAITGSEEGTPDS 236
Query: 227 VNPSVV--DEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
VNPSVV DEEEGLPSPPLDE AFF + +ELSQ F
Sbjct: 237 VNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELSQFF 274
>gi|388520529|gb|AFK48326.1| unknown [Medicago truncatula]
Length = 451
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/271 (65%), Positives = 204/271 (75%), Gaps = 21/271 (7%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKSGSLD WR+YFRS+N DIFDIIDHA++VAA DCPKEFK RRD IAE+LF+ L RC G
Sbjct: 4 MKSGSLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63
Query: 63 CDRVELAVPSGNEFDDDEED--CKRDGCEFEAGGSKESKVNSCRDDH--VSNQIVSNFSS 118
C++VEL+VP DDD D CKR G SKESKV+ R+++ + +SN+S
Sbjct: 64 CEKVELSVP-----DDDNGDELCKR--SSVREGASKESKVDCSREENGVMDANPISNYSF 116
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G+ AEALTDE+EE+SQ+V EV RIKEIL+N DESDSVLFESLRRLQLM L VD LK+TE
Sbjct: 117 GE-AEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTE 175
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT-----KAIAEGTPDSVNPSVVD 233
IGKAVN LRKHGSK IR LARTLI+GWK+LV+ WV AT A EGTPDS NPSVV+
Sbjct: 176 IGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVE 235
Query: 234 EEE----GLPSPPLDELAFFTGPSAGIELSQ 260
EE GLPSPPLDE AFF P+ IELSQ
Sbjct: 236 NEEEEEGGLPSPPLDEGAFFVAPTGTIELSQ 266
>gi|357509279|ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499943|gb|AES81146.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 447
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/273 (64%), Positives = 204/273 (74%), Gaps = 21/273 (7%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WR+YFRS+N DIFDIIDHA++VAA DCPKEFK RRD IAE+LF+ L RC G
Sbjct: 4 MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63
Query: 63 CDRVELAVPSGNEFDDDEED--CKRDGCEFEAGGSKESKVNSCRDDH--VSNQIVSNFSS 118
C++VEL+VP DDD D CKR G SKESKV+ R+++ + +SN+S
Sbjct: 64 CEKVELSVP-----DDDNGDELCKR--SSVREGASKESKVDCSREENGVMDANPISNYSF 116
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G+ AEALTDE+EE+SQ+V EV RIKEIL+N DESDSVLFESLRRLQLM L VD LK+TE
Sbjct: 117 GE-AEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTE 175
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT-----KAIAEGTPDSVNPSVVD 233
IGKAVN LRKHGSK IR LARTLI+GWK+LV+ WV AT A EGTPDS NPSVV+
Sbjct: 176 IGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVE 235
Query: 234 EEE----GLPSPPLDELAFFTGPSAGIELSQVF 262
EE GLPSPPLDE AFF P+ IELSQ F
Sbjct: 236 NEEEEEGGLPSPPLDEGAFFVAPTGTIELSQFF 268
>gi|357509283|ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499945|gb|AES81148.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 444
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/273 (64%), Positives = 204/273 (74%), Gaps = 21/273 (7%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WR+YFRS+N DIFDIIDHA++VAA DCPKEFK RRD IAE+LF+ L RC G
Sbjct: 1 MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 60
Query: 63 CDRVELAVPSGNEFDDDEED--CKRDGCEFEAGGSKESKVNSCRDDH--VSNQIVSNFSS 118
C++VEL+VP DDD D CKR G SKESKV+ R+++ + +SN+S
Sbjct: 61 CEKVELSVP-----DDDNGDELCKR--SSVREGASKESKVDCSREENGVMDANPISNYSF 113
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G+ AEALTDE+EE+SQ+V EV RIKEIL+N DESDSVLFESLRRLQLM L VD LK+TE
Sbjct: 114 GE-AEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTE 172
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT-----KAIAEGTPDSVNPSVVD 233
IGKAVN LRKHGSK IR LARTLI+GWK+LV+ WV AT A EGTPDS NPSVV+
Sbjct: 173 IGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAASEEGTPDSRNPSVVE 232
Query: 234 EEE----GLPSPPLDELAFFTGPSAGIELSQVF 262
EE GLPSPPLDE AFF P+ IELSQ F
Sbjct: 233 NEEEEEGGLPSPPLDEGAFFVAPTGTIELSQFF 265
>gi|297806513|ref|XP_002871140.1| hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp.
lyrata]
gi|297316977|gb|EFH47399.1| hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp.
lyrata]
Length = 436
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 191/266 (71%), Gaps = 12/266 (4%)
Query: 5 SGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD 64
SGSLD+WR YFR + DIF IIDHA+MVAA DCP +FK RRD+IAE LF+C+++RC GCD
Sbjct: 4 SGSLDSWREYFRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVSRCIGCD 63
Query: 65 RVELAVPSGNEFDDDEEDCKRDGC------EFEAGGSKESKVNSCRDDHVSNQIVSNFSS 118
+EL+VP +E + G ++E GGSKESK NS R D SNQIVSN++
Sbjct: 64 HLELSVPGDDEGNRGRGATGDGGGGTAVDEDYEVGGSKESKANSSRGD--SNQIVSNYTF 121
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
D AEAL+DEIEE S V EV RIKEIL N DE +SVL +SLR L+LM+L VD LK+TE
Sbjct: 122 -DEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKSTE 180
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI--AEGTPDSVNPSVVDEEE 236
IGKAVNGLRKHGS +IR LA+TLI WK+LVD+WVN TK I AEGTP+S NPSVVDEEE
Sbjct: 181 IGKAVNGLRKHGSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVVDEEE 240
Query: 237 GLPSPPLDELAFFTGPSAGIELSQVF 262
PS P D + FT G E+S F
Sbjct: 241 AFPSLPYD-VDIFTPEPNGFEISHFF 265
>gi|449531689|ref|XP_004172818.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like, partial [Cucumis sativus]
Length = 207
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/208 (74%), Positives = 175/208 (84%), Gaps = 7/208 (3%)
Query: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
M+ KSGSLD+WRNYFR+AN DIF IID+A++VAA DCPKEF+LRRDRIAE+LF+C+LTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 SGCDRVELAVPSGNEFDDDE----EDCKRDGCEFEAGGSKESKVNSCRDD--HVSNQIVS 114
GCDRVELAV + DD E D RDGCEFEAGGSKESKV S RDD ++ VS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 115 NFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTL 174
NFS G+ AEALTDEIE+ESQ+VGEVLRIKEIL+N DESD VLFESLRRL+LMAL+VDTL
Sbjct: 121 NFSFGE-AEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTL 179
Query: 175 KATEIGKAVNGLRKHGSKQIRHLARTLI 202
+ATEIGKAVN LRKHGSK+IRHLAR LI
Sbjct: 180 QATEIGKAVNCLRKHGSKRIRHLARVLI 207
>gi|42567655|ref|NP_196133.3| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|75170631|sp|Q9FHK9.1|MD26B_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26b
gi|9759255|dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana]
gi|332003450|gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 436
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/266 (59%), Positives = 190/266 (71%), Gaps = 12/266 (4%)
Query: 5 SGSLDNWRNYFRS-ANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGC 63
SGSLD+WR YFR + DIF IIDHA+MVAA DCP +FK RRD+IAE LF+C++ RC GC
Sbjct: 4 SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63
Query: 64 DRVELAVPSGNEFDDDEEDCKRDGC----EFE-AGGSKESKVNSCRDDHVSNQIVSNFSS 118
D +EL+VP +E + G ++E AGGSKESK NS R D+ NQIVSN++
Sbjct: 64 DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGDN--NQIVSNYTF 121
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
D AEAL+DEIEE S V EV RIKEIL N DE +SVL +SLR L+LM+L VD LK+TE
Sbjct: 122 -DEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKSTE 180
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI--AEGTPDSVNPSVVDEEE 236
IGKAVNGLRKH S +IR LA+TLI WK+LVD+WVN TK I AEGTP+S NPSV+DEEE
Sbjct: 181 IGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVLDEEE 240
Query: 237 GLPSPPLDELAFFTGPSAGIELSQVF 262
PS P D + FT G E+S F
Sbjct: 241 AFPSLPYD-VDIFTPEPNGFEISHFF 265
>gi|357509281|ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499944|gb|AES81147.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 467
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 169/218 (77%), Gaps = 12/218 (5%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
MKS SLD WR+YFRS+N DIFDIIDHA++VAA DCPKEFK RRD IAE+LF+ L RC G
Sbjct: 4 MKSESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKG 63
Query: 63 CDRVELAVPSGNEFDDDEED--CKRDGCEFEAGGSKESKVNSCRDDH--VSNQIVSNFSS 118
C++VEL+VP DDD D CKR G SKESKV+ R+++ + +SN+S
Sbjct: 64 CEKVELSVP-----DDDNGDELCKRSS--VREGASKESKVDCSREENGVMDANPISNYSF 116
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G+ AEALTDE+EE+SQ+V EV RIKEIL+N DESDSVLFESLRRLQLM L VD LK+TE
Sbjct: 117 GE-AEALTDELEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTE 175
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
IGKAVN LRKHGSK IR LARTLI+GWK+LV+ WV AT
Sbjct: 176 IGKAVNHLRKHGSKDIRQLARTLIDGWKELVNAWVKAT 213
>gi|297741674|emb|CBI32806.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/180 (68%), Positives = 143/180 (79%), Gaps = 12/180 (6%)
Query: 86 DGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEI 145
D C+FEAGG ++N + VSN+S G+ AEALTDEIEEE+Q+ GEVLRI+EI
Sbjct: 2 DACQFEAGGKDHGEMNMNQ--------VSNYSYGE-AEALTDEIEEETQIAGEVLRIREI 52
Query: 146 LHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
L +S+DESDSVLF+SLRRLQLM L+VD LKATEIGKAVNGLRKHGSKQIR LARTLI+ W
Sbjct: 53 LEHSKDESDSVLFDSLRRLQLMVLSVDNLKATEIGKAVNGLRKHGSKQIRQLARTLIDEW 112
Query: 206 KDLVDEWVNATKAIAEGTPDSVNPS---VVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
KD+VDEWVNAT AIAEGTPDSVNPS D+EEGLP PP+DEL+F T +ELSQ F
Sbjct: 113 KDMVDEWVNATAAIAEGTPDSVNPSVVDDDDDEEGLPFPPMDELSFLTTQPTSLELSQFF 172
>gi|186509965|ref|NP_187693.2| transcription elongation factor-like protein [Arabidopsis thaliana]
gi|332641438|gb|AEE74959.1| transcription elongation factor-like protein [Arabidopsis thaliana]
Length = 288
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 182/315 (57%), Gaps = 45/315 (14%)
Query: 5 SGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD 64
S SLD WR YFR + DIF IIDHA+MVAA D PKEFK R DRIAE LF+CK++RC GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
+EL++ E+ V ++ S ++G
Sbjct: 67 HLELSI-----------------------AGDEAAVEIVGVGGGGDRGDSGVATG----- 98
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
E EE S V EV+RI++IL N DE DSVL ESLR+L+ M+++VD LK TEIGKAVN
Sbjct: 99 ---EGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGKAVN 155
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA--EGTPDSVNPSVVDEEEGLPSPP 242
GLR+H S +I LA+TL WK LVD+W+N + +A EGTP+S+N SV+DEEE PSPP
Sbjct: 156 GLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVIDEEEAFPSPP 215
Query: 243 LDELAFFTGPSAGIELSQVFLMAWMILEILETVGNSSRTVKVEENLQWRTKISQSGNSKL 302
D L + G ELSQ+ W +EIL TV + N++ K+ + G+ +
Sbjct: 216 HD-LDIYAPEPNGFELSQI---VWTAMEILVTVWSP--------NMKENRKVVRGGDPRE 263
Query: 303 LMSRMCLPRITIVYR 317
M +M L ++ R
Sbjct: 264 QMMQMWLGGTAMINR 278
>gi|297829634|ref|XP_002882699.1| hypothetical protein ARALYDRAFT_317880 [Arabidopsis lyrata subsp.
lyrata]
gi|297328539|gb|EFH58958.1| hypothetical protein ARALYDRAFT_317880 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/275 (46%), Positives = 172/275 (62%), Gaps = 32/275 (11%)
Query: 5 SGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD 64
S SLDNWR+YFR + DIF IIDHA+MVAA D P EFK RRDRIAE LF+C+++RC GCD
Sbjct: 4 SVSLDNWRDYFRRGDSDIFGIIDHAIMVAAADWPNEFKSRRDRIAELLFSCRVSRCIGCD 63
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
+EL++ G +E+ + CR + + V D +
Sbjct: 64 HLELSI----------------------AGDEEAN-HGCR----TVETVGGGGDRDDSGV 96
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
TD+ EE S +V EV+R ++IL N DE++SVL ESLR+L+ M+++VD LK TEIGKAVN
Sbjct: 97 ATDDGEEASVIVDEVMRNRDILLNKEDETESVLLESLRKLESMSMSVDILKDTEIGKAVN 156
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA--EGTPDSVNPSVVDEEEGLPSPP 242
GLR+H S +I LA+TL WK LVD+W+N + +A EGTP+S N SV+DEEE PSPP
Sbjct: 157 GLRRHSSDKISKLAKTLFAEWKKLVDQWMNTPEEMAGTEGTPESANLSVIDEEEAFPSPP 216
Query: 243 LDELAFFTGPSAGIELSQ--VFLMAWMILEILETV 275
D L + G ELSQ + +++L + + V
Sbjct: 217 HD-LDIYAPEPNGFELSQRKCYPDKFLLLSLFQNV 250
>gi|357133677|ref|XP_003568450.1| PREDICTED: uncharacterized protein LOC100834194 [Brachypodium
distachyon]
Length = 535
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 180/312 (57%), Gaps = 54/312 (17%)
Query: 5 SGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKL-TRCS-- 61
S LD WR++FR A I ++I+ A++VAA D P+EF RRDRIAE+LF L TR S
Sbjct: 2 SDGLDRWRDFFRGAGVGICEVIEKAILVAAADQPEEFLRRRDRIAERLFNAVLATRPSSH 61
Query: 62 GCDRVELAV-PSGNEFDDD--------EEDCKRDGCEFEAGG------------------ 94
GC L+V P+ +D E++ K D A G
Sbjct: 62 GCTGSTLSVLPATPAVVEDKGSVRRVPEKESKVDSSSLGAPGRGLPLPNHEVEDSDSDSE 121
Query: 95 --SKESKVNSCRDDH-------------------VSNQIVSNFSSGDIAEALTDEIEEES 133
+ + +C H + ++ D EALT+E++EES
Sbjct: 122 DDERLRRAAACNYGHNYDDDNEEEEEEQAAATQEEDGHPEDDHAAADELEALTNEMDEES 181
Query: 134 QVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ 193
Q+V EVLRIKE+L + +D SDS LFESLRRLQLM L+V TL+ATEIG+AVNGLRKH S+Q
Sbjct: 182 QIVREVLRIKELLLHKQDHSDSTLFESLRRLQLMQLSVSTLQATEIGRAVNGLRKHNSQQ 241
Query: 194 IRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVV---DEEEGLPSPPLDELAFFT 250
IRHL +TLI+ WK LVDEWV T A+ + +P + NPSVV DEE+GLPSPPLDE AFF
Sbjct: 242 IRHLVQTLIQDWKILVDEWVMTTVALTDNSPLTSNPSVVDDEDEEQGLPSPPLDEGAFFA 301
Query: 251 GPSAGIELSQVF 262
+ I+LS+ F
Sbjct: 302 PETTAIQLSEFF 313
>gi|334185233|ref|NP_001189856.1| transcription elongation factor-like protein [Arabidopsis thaliana]
gi|395406778|sp|F4J4Y5.1|MD26A_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26a
gi|332641439|gb|AEE74960.1| transcription elongation factor-like protein [Arabidopsis thaliana]
Length = 580
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 166/281 (59%), Gaps = 41/281 (14%)
Query: 5 SGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD 64
S SLD WR YFR + DIF IIDHA+MVAA D PKEFK R DRIAE LF+CK++RC GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
+EL++ +G+E V V +
Sbjct: 67 HLELSI-AGDEA------------------------------AVEIVGVGGGGDRGDSGV 95
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
T E EE S V EV+RI++IL N DE DSVL ESLR+L+ M+++VD LK TEIGKAVN
Sbjct: 96 ATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGKAVN 155
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA--EGTPDSVNPSVVDEEEGLPSPP 242
GLR+H S +I LA+TL WK LVD+W+N + +A EGTP+S+N SV+DEEE PSPP
Sbjct: 156 GLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVIDEEEAFPSPP 215
Query: 243 LDELAFFTGPSAGIELSQVFLMAWMILEILETVGNSSRTVK 283
D L + G ELSQ IL+ L+ GN +V+
Sbjct: 216 HD-LDIYAPEPNGFELSQ-------ILDCLDCDGNPRHSVE 248
>gi|6630548|gb|AAF19567.1|AC011708_10 hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/259 (48%), Positives = 156/259 (60%), Gaps = 34/259 (13%)
Query: 5 SGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD 64
S SLD WR YFR + DIF IIDHA+MVAA D PKEFK R DRIAE LF+CK++RC GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
+EL++ +G+E V V +
Sbjct: 67 HLELSI-AGDEA------------------------------AVEIVGVGGGGDRGDSGV 95
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
T E EE S V EV+RI++IL N DE DSVL ESLR+L+ M+++VD LK TEIGKAVN
Sbjct: 96 ATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGKAVN 155
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA--EGTPDSVNPSVVDEEEGLPSPP 242
GLR+H S +I LA+TL WK LVD+W+N + +A EGTP+S+N SV+DEEE PSPP
Sbjct: 156 GLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVIDEEEAFPSPP 215
Query: 243 LDELAFFTGPSAGIELSQV 261
D L + G ELSQ
Sbjct: 216 HD-LDIYAPEPNGFELSQT 233
>gi|413949275|gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays]
Length = 535
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 115/142 (80%), Gaps = 2/142 (1%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALT+EI+EESQ+VGEVLRIKE+L + D SD+ LF+SLRRLQLM L+V TLKATEIG+A
Sbjct: 170 EALTNEIDEESQIVGEVLRIKELLLHKEDHSDATLFDSLRRLQLMQLSVSTLKATEIGRA 229
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVD-EEEGLPS 240
VN LRKH S++IRHL TLIEGWK LVDEWV+ T A+ E +P S NPSVVD EEEGLPS
Sbjct: 230 VNRLRKHNSREIRHLVCTLIEGWKVLVDEWVSTTNAALTENSPGSSNPSVVDEEEEGLPS 289
Query: 241 PPLDELAFFTGPSAGIELSQVF 262
PPLDE AFF + I+LS+ F
Sbjct: 290 PPLDEGAFFATQTTSIQLSEFF 311
>gi|326495800|dbj|BAJ85996.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509413|dbj|BAJ91623.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518852|dbj|BAJ92587.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 117/144 (81%), Gaps = 4/144 (2%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALT+EI+EESQ++GEVLRIKE+L + +D SD+ LF+SLRRLQLM L+V TLKATEIG+A
Sbjct: 175 EALTNEIDEESQILGEVLRIKELLLHKQDHSDTTLFDSLRRLQLMQLSVSTLKATEIGRA 234
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVD---EEEGL 238
VNGLRKH S+QIRHL +TLI+ WK LVDEWV+ T A+A+ +P + NPSVVD EEEGL
Sbjct: 235 VNGLRKHSSQQIRHLVQTLIDDWKILVDEWVSTTNVALADNSPGTSNPSVVDDDEEEEGL 294
Query: 239 PSPPLDELAFFTGPSAGIELSQVF 262
PSPPLDE AFF + I+LS F
Sbjct: 295 PSPPLDEGAFFAPETTAIQLSAFF 318
>gi|222631595|gb|EEE63727.1| hypothetical protein OsJ_18545 [Oryza sativa Japonica Group]
Length = 469
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 3/143 (2%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALT+EI+EESQVVGEVLRIK++ + D SD+ LFESLRRLQLM L+V TLKATEIG+A
Sbjct: 121 EALTNEIDEESQVVGEVLRIKDLFLHKEDHSDATLFESLRRLQLMQLSVSTLKATEIGRA 180
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVD--EEEGLP 239
VNGLRKH S+QIRHL RTLIEGWK LVDEWV+ T A+ + +P S SVVD ++EGLP
Sbjct: 181 VNGLRKHNSQQIRHLVRTLIEGWKILVDEWVSTTNVALTDNSPGSSKTSVVDDADDEGLP 240
Query: 240 SPPLDELAFFTGPSAGIELSQVF 262
SPPLDE AFF + I+LS+ F
Sbjct: 241 SPPLDEGAFFATQTTAIQLSEFF 263
>gi|125552338|gb|EAY98047.1| hypothetical protein OsI_19963 [Oryza sativa Indica Group]
Length = 516
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 3/143 (2%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALT+EI+EESQVVGEVLRIK++ + D SD+ LFESLRRLQLM L+V TLKATEIG+A
Sbjct: 168 EALTNEIDEESQVVGEVLRIKDLFLHKEDHSDATLFESLRRLQLMQLSVSTLKATEIGRA 227
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVD--EEEGLP 239
VNGLRKH S+QIRHL RTLIEGWK LVDEWV+ T A+ + +P S SVVD ++EGLP
Sbjct: 228 VNGLRKHNSQQIRHLVRTLIEGWKILVDEWVSTTNVALTDNSPGSSKTSVVDDADDEGLP 287
Query: 240 SPPLDELAFFTGPSAGIELSQVF 262
SPPLDE AFF + I+LS+ F
Sbjct: 288 SPPLDEGAFFATQTTAIQLSEFF 310
>gi|51038233|gb|AAT94036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 516
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 3/143 (2%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALT+EI+EESQVVGEVLRIK++ + D SD+ LFESLRRLQLM L+V TLKATEIG+A
Sbjct: 168 EALTNEIDEESQVVGEVLRIKDLFLHKEDHSDATLFESLRRLQLMQLSVSTLKATEIGRA 227
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVD--EEEGLP 239
VNGLRKH S+QIRHL RTLIEGWK LVDEWV+ T A+ + +P S SVVD ++EGLP
Sbjct: 228 VNGLRKHNSQQIRHLVRTLIEGWKILVDEWVSTTNVALTDNSPGSSKTSVVDDADDEGLP 287
Query: 240 SPPLDELAFFTGPSAGIELSQVF 262
SPPLDE AFF + I+LS+ F
Sbjct: 288 SPPLDEGAFFATQTTAIQLSEFF 310
>gi|56785021|dbj|BAD82603.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 390
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 145/271 (53%), Gaps = 38/271 (14%)
Query: 7 SLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-----TCKLTRCS 61
++ WR FR A DI+D+I +A+++A D P+E RR I E LF T +
Sbjct: 9 GMERWREMFRGA--DIYDVIRNAILIAGADSPRELLRRRQGIIEWLFAVAPVTVPVPAPL 66
Query: 62 GCDRV---------ELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQI 112
C RV A+P G D+ D F A ++ S ++
Sbjct: 67 ACGRVVDGAGNRLPPAAIPDGGGHHHDDNDGN-----FAAAEAQTSLIDQ---------- 111
Query: 113 VSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVD 172
I EAL DEIEE++QV+ EVLRIK+IL N +++S LF+ LRRLQLM L++
Sbjct: 112 -------QILEALYDEIEEDTQVINEVLRIKDILINYKEQSVDTLFDGLRRLQLMRLSIS 164
Query: 173 TLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVV 232
LK+T+I +AV L KH S I +AR L +GWK + +WV + A A+ +PD NPS V
Sbjct: 165 VLKSTQIAEAVAPLNKHRSPVICKIARDLAKGWKGVAADWVGPSSANADTSPDISNPSTV 224
Query: 233 DEEEGLPSPPLDELAFFTGPSAGIELSQVFL 263
+++ GLP+PP+D AFF SA + FL
Sbjct: 225 EDDFGLPTPPMDVGAFFLPQSAAEQYVSEFL 255
>gi|222618215|gb|EEE54347.1| hypothetical protein OsJ_01329 [Oryza sativa Japonica Group]
Length = 459
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 142/261 (54%), Gaps = 38/261 (14%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-----TCKLTRCSG 62
++ WR FR A DI+D+I +A+++A D P+E RR I E LF T +
Sbjct: 10 MERWREMFRGA--DIYDVIRNAILIAGADSPRELLRRRQGIIEWLFAVAPVTVPVPAPLA 67
Query: 63 CDRV---------ELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIV 113
C RV A+P G D+ D F A ++ S ++
Sbjct: 68 CGRVVDGAGNRLPPAAIPDGGGHHHDDNDGN-----FAAAEAQTSLIDQ----------- 111
Query: 114 SNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDT 173
I EAL DEIEE++QV+ EVLRIK+IL N +++S LF+ LRRLQLM L++
Sbjct: 112 ------QILEALYDEIEEDTQVINEVLRIKDILINYKEQSVDTLFDGLRRLQLMRLSISV 165
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVD 233
LK+T+I +AV L KH S I +AR L +GWK + +WV + A A+ +PD NPS V+
Sbjct: 166 LKSTQIAEAVAPLNKHRSPVICKIARDLAKGWKGVAADWVGPSSANADTSPDISNPSTVE 225
Query: 234 EEEGLPSPPLDELAFFTGPSA 254
++ GLP+PP+D AFF SA
Sbjct: 226 DDFGLPTPPMDVGAFFLPQSA 246
>gi|308079985|ref|NP_001183065.1| uncharacterized protein LOC100501416 [Zea mays]
gi|238009160|gb|ACR35615.1| unknown [Zea mays]
gi|413955651|gb|AFW88300.1| hypothetical protein ZEAMMB73_008462 [Zea mays]
Length = 279
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 140/258 (54%), Gaps = 23/258 (8%)
Query: 6 GSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDR 65
SLD WR +F A IFD ID A+ VAA D P + RRD IAE+L+T
Sbjct: 9 ASLDYWRCFFSGARASIFDAIDAAIRVAAADHPDALRARRDAIAERLYTAI--------- 59
Query: 66 VELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEAL 125
+A+P+ E + E S S +S R ++V+N G L
Sbjct: 60 --VALPATQEAPGQSTPGQPALLLPEGAASVPSLCSSDR-----AEVVNNDGGG---APL 109
Query: 126 TDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNG 185
T+ + VV E RIK L N++D+S++ L E L RL + TVD ++AT IG V
Sbjct: 110 TN---SDDDVVAEAFRIKAALSNAQDKSEAELLELLGRLGQLEFTVDAIRATGIGMDVRP 166
Query: 186 LRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE-GLPSPPLD 244
LRKHGSKQIR L R+LIEGW V+EW+N + + TP SV+ S +DEEE GLPSPP+D
Sbjct: 167 LRKHGSKQIRQLVRSLIEGWTATVNEWMNNGDPVVDHTPQSVDASCLDEEEGGLPSPPMD 226
Query: 245 ELAFFTGPSAGIELSQVF 262
E A F P IELS++
Sbjct: 227 EAALFAAPCTSIELSEIL 244
>gi|242040837|ref|XP_002467813.1| hypothetical protein SORBIDRAFT_01g034540 [Sorghum bicolor]
gi|241921667|gb|EER94811.1| hypothetical protein SORBIDRAFT_01g034540 [Sorghum bicolor]
Length = 437
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 137/262 (52%), Gaps = 41/262 (15%)
Query: 6 GSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDR 65
SLD WR +F A IFD ID A+ VAA D P + RRD IAE+L+T + +
Sbjct: 10 ASLDYWRGFFSGARASIFDAIDAAIRVAAADHPDALRARRDAIAERLYTALIALPAP--- 66
Query: 66 VELAVPSGNEFDDDEEDCKRDGCEF----EAGGSKESKVNSCRDDHVSNQIVSNFSSGDI 121
P G+ R E GS V + S D
Sbjct: 67 ---EAPPGHP--------TRGQPPLLLLPEGAGS-----------------VPSLCSSDR 98
Query: 122 AEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGK 181
AE+ + VV E R+K L N++D+S++ L E L RL + TVD ++ATEIG
Sbjct: 99 AESDD-----DDDVVAEAFRVKAALSNAQDKSEAELLELLGRLGQLEFTVDAIRATEIGM 153
Query: 182 AVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE-GLPS 240
AV LRKHGSKQIR L R+LIEGWK V+EWVN I + TP SV+ S +D+EE GLPS
Sbjct: 154 AVKPLRKHGSKQIRQLVRSLIEGWKATVNEWVNNKDPIVDHTPQSVDASCLDQEEGGLPS 213
Query: 241 PPLDELAFFTGPSAGIELSQVF 262
PP+DE A F P I+LS+ F
Sbjct: 214 PPMDEAALFAAPCTSIQLSEFF 235
>gi|357509285|ref|XP_003624931.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499946|gb|AES81149.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 302
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/120 (70%), Positives = 92/120 (76%), Gaps = 9/120 (7%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
+SDSVLFESLRRLQLM L VD LK+TEIGKAVN LRKHGSK IR LARTLI+GWK+LV+
Sbjct: 4 QSDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQLARTLIDGWKELVNA 63
Query: 212 WVNAT-----KAIAEGTPDSVNPSVVDEEE----GLPSPPLDELAFFTGPSAGIELSQVF 262
WV AT A EGTPDS NPSVV+ EE GLPSPPLDE AFF P+ IELSQ F
Sbjct: 64 WVKATTTTPVAASEEGTPDSRNPSVVENEEEEEGGLPSPPLDEGAFFVAPTGTIELSQFF 123
>gi|168060055|ref|XP_001782014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666505|gb|EDQ53157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 146/259 (56%), Gaps = 29/259 (11%)
Query: 14 YFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCK--LTRCSGCDRVELAVP 71
+ A DI+ +ID+ + +AA D P E ++RRD EKLF L++ +GC L V
Sbjct: 380 FLNGAGADIWTVIDNVLDIAATDYPHELRIRRDGFVEKLFAHPALLSKSNGC----LPVV 435
Query: 72 SGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHV-------SNQIVSNFSSGDIAEA 124
+ ++ ++ +D D +++ DHV +++V++ D AEA
Sbjct: 436 ACHDVEEAHDDKGVDPPDYDY-------------DHVRTELSDDEDRLVNSTEEYDEAEA 482
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
L D +EEE++ EVLR+K+IL +S + +S + +LR L+ M ++V+ LK TEIGK VN
Sbjct: 483 LNDAMEEEARQTLEVLRVKDILADS-SQDESAILTALRTLEDMHISVEALKQTEIGKEVN 541
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLD 244
LRKH SK++R LA+ L+ WKDLVDEWV + +A + + V + EEGLPSPPLD
Sbjct: 542 ALRKHPSKRVRSLAKDLVRSWKDLVDEWVKSAGDVAAAA-AADSAGVDNGEEGLPSPPLD 600
Query: 245 ELAFFTGPSAG-IELSQVF 262
A A IE+S F
Sbjct: 601 PGALLASTRANSIEMSHFF 619
>gi|357119771|ref|XP_003561607.1| PREDICTED: uncharacterized protein LOC100843529 [Brachypodium
distachyon]
Length = 387
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 131/251 (52%), Gaps = 38/251 (15%)
Query: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
M+ SLD WR +F A IFD ID A+ VAA D P + RR IAE L+T
Sbjct: 1 MAAPPRSLDYWRGFFNGAQASIFDAIDAAIRVAAADHPDGLRARRAAIAEHLYT------ 54
Query: 61 SGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGD 120
+ PS + + G S V++ RD SSGD
Sbjct: 55 -------VLPPSEEAVWPAPAFAGAPPLQEQHGSSDGPAVSTHRD-----------SSGD 96
Query: 121 IAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIG 180
VV E +R+K L +++ +S+ L + LRRLQL+ TVDT++ TEI
Sbjct: 97 -------------PVVAEAVRVKAALSSNQQKSEDELLDLLRRLQLLQFTVDTVRVTEII 143
Query: 181 KAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE-GLP 239
KAV LRKH SKQIR LA +LIEGW+ V+EW+N AI + TP S++ S +++EE GLP
Sbjct: 144 KAVQPLRKHASKQIRQLAGSLIEGWQATVNEWMNNEAAIIDHTPQSMDVSCLEQEEGGLP 203
Query: 240 SPPLDELAFFT 250
SPP+DE A F
Sbjct: 204 SPPMDEAALFA 214
>gi|115473677|ref|NP_001060437.1| Os07g0642600 [Oryza sativa Japonica Group]
gi|113611973|dbj|BAF22351.1| Os07g0642600 [Oryza sativa Japonica Group]
Length = 450
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 141/263 (53%), Gaps = 26/263 (9%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
M S+D W +FR A IFD ID A+ VAA D P + RRD IAE+L+T L +
Sbjct: 1 MAPPSMDYWLGFFRGAGDSIFDAIDAAIAVAASDHPAALRSRRDAIAERLYTAHLVPGAP 60
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIA 122
+ + E S S +S R A
Sbjct: 61 PAGPPAGGGAAAADAPTAQLL----LHPEGAASVPSLCSSDR-----------------A 99
Query: 123 EALTDE----IEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
E +TD+ ++ V E RIK IL N +++S++ L E LRRLQ + LTVDTL TE
Sbjct: 100 EVITDDGAVPRRDDDPVAAETERIKAILLNDQEKSEATLLELLRRLQQLELTVDTLTVTE 159
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE-G 237
IGKAV+ RKH SKQIRHL R LIEGWK +VDEW+++ AI + TP S++PS ++++E G
Sbjct: 160 IGKAVSSYRKHNSKQIRHLVRLLIEGWKRIVDEWMSSRDAIVDHTPQSMHPSGLEQDERG 219
Query: 238 LPSPPLDELAFFTGPSAGIELSQ 260
L SP +DE A F PS I LS+
Sbjct: 220 LSSPSMDEGALFATPSTSIRLSE 242
>gi|357119773|ref|XP_003561608.1| PREDICTED: uncharacterized protein LOC100843839 [Brachypodium
distachyon]
Length = 523
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 137/265 (51%), Gaps = 50/265 (18%)
Query: 1 MSMKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRC 60
M+ SL+ WR +F S+ IFD ID A+ VAA D P + RRD IA++L+T L R
Sbjct: 1 MAPPPQSLEYWRVFFNSSRASIFDAIDAAIRVAAADNPDGLRARRDAIAQRLYTV-LPRA 59
Query: 61 SGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGD 120
+ E AV + ++ S
Sbjct: 60 T-----EEAV-----------------------------------------LAADISPPL 73
Query: 121 IAE--ALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
+ E A+ + + VV E +R+K L ++ +S+ L + LRRLQL+ TVDT+K T+
Sbjct: 74 LPEGPAVAPHRDSDDPVVAEAIRVKVALSRNKQKSEDELLDLLRRLQLLKFTVDTIKVTD 133
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE-G 237
I KAV LR H SK+IR LAR+LIEGW+ V+E N A + TP S++PS +++EE G
Sbjct: 134 IVKAVQPLRNHVSKKIRELARSLIEGWQAEVNESTNNEAATIDHTPRSMDPSCLEQEEGG 193
Query: 238 LPSPPLDELAFFTGPSAGIELSQVF 262
LP PP+DE A F P ++LS+ F
Sbjct: 194 LPCPPMDEAALFVKPCTFVDLSEFF 218
>gi|218200112|gb|EEC82539.1| hypothetical protein OsI_27066 [Oryza sativa Indica Group]
Length = 451
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 139/264 (52%), Gaps = 27/264 (10%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
M S+D W +FR A IFD ID A+ VAA D P + RRD IAE+L+T L +
Sbjct: 1 MAPPSMDYWLGFFRGAGDSIFDAIDAAIAVAASDHPAALRSRRDAIAERLYTAHLVPGAP 60
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIA 122
+ E S S +S R A
Sbjct: 61 PAVPPAGGGGAAADAPPAQLL----LHPEGAASVPSLCSSDR-----------------A 99
Query: 123 EALTDE-----IEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKAT 177
E +TD+ ++ V E IK IL N +++S++ L E LRRLQ + LTVDTL T
Sbjct: 100 EVITDDDGAVPRRDDDPVAAETECIKAILLNDQEKSEATLLELLRRLQQLELTVDTLTVT 159
Query: 178 EIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE- 236
EIGKAV+ RKH SKQIRHL R LIEGWK +VDEW+++ AI + TP S++PS ++++E
Sbjct: 160 EIGKAVSSYRKHNSKQIRHLVRLLIEGWKRIVDEWMSSRDAIVDHTPQSMHPSGLEQDER 219
Query: 237 GLPSPPLDELAFFTGPSAGIELSQ 260
GL SP +DE A F PS I LS+
Sbjct: 220 GLSSPSMDEGALFATPSTSIRLSE 243
>gi|357116248|ref|XP_003559894.1| PREDICTED: uncharacterized protein LOC100842292 [Brachypodium
distachyon]
Length = 448
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 134/261 (51%), Gaps = 30/261 (11%)
Query: 7 SLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRV 66
S D W +FR+A IFD+I+ A+ VAA D P + RRD IAE L+T L V
Sbjct: 6 STDCWAAFFRAAGDGIFDLIEAAIDVAAADRPDALRARRDAIAEHLYTATLA-------V 58
Query: 67 ELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALT 126
A + K+ G + V + S D AEA+T
Sbjct: 59 SGAPAAAAGAAARPPAPKQQQLLLPEGAAS----------------VPSLCSSDRAEAIT 102
Query: 127 DE-----IEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGK 181
D+ E + V E RIK L N ++S+ L E LRRLQ + TV TLK TEIGK
Sbjct: 103 DDGAPRRGEGDDAVAAEAERIKAALVNYHEKSEGALLELLRRLQQLEFTVHTLKVTEIGK 162
Query: 182 AVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA-TKAIAEGTPDSVNPSVVDEEE-GLP 239
V LRKH SKQIR L R L+ GWK +VD+W+++ AI + TP S++PS +++E+ GL
Sbjct: 163 TVTNLRKHNSKQIRQLVRLLVGGWKLIVDDWMSSGGDAIVDHTPQSMHPSNLEQEDRGLS 222
Query: 240 SPPLDELAFFTGPSAGIELSQ 260
SP +DE A S I LS+
Sbjct: 223 SPAMDEGALLATLSTSIGLSE 243
>gi|242051058|ref|XP_002463273.1| hypothetical protein SORBIDRAFT_02g040970 [Sorghum bicolor]
gi|241926650|gb|EER99794.1| hypothetical protein SORBIDRAFT_02g040970 [Sorghum bicolor]
Length = 454
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 135/263 (51%), Gaps = 16/263 (6%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKL-TRCS 61
M S D W +FR A +IFD ID A+ VAA D P + RRD IAE+LFT L T +
Sbjct: 1 MAPPSRDYWLGFFRGAGDNIFDAIDAAITVAASDHPAALRERRDGIAERLFTALLVTGAA 60
Query: 62 GCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDI 121
A +G G A E + V + S D
Sbjct: 61 AAGAAGAAAAAGAGQGGAAGGTPVAGAPTPAQLHPEGAAS-----------VPSLCSSDR 109
Query: 122 AEALTDEIEE--ESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEI 179
AEA+TD+ + V+ E RIK +L N +++S+S L E LRRLQ + L DTL T I
Sbjct: 110 AEAITDDGAPRCDDPVLAETERIKAVLLNDQEKSESELLELLRRLQELDLAFDTLDVTAI 169
Query: 180 GKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVDEEE-G 237
GKAV RKH SKQIR+L R+LIE WK VD W+ + A+ + TP S+ PS +++E+ G
Sbjct: 170 GKAVANFRKHSSKQIRNLVRSLIEDWKHTVDVWIARRREAVVDQTPQSMGPSSLEQEDRG 229
Query: 238 LPSPPLDELAFFTGPSAGIELSQ 260
S +DE F PS I LS+
Sbjct: 230 AASTHMDEGDLFATPSTTIRLSE 252
>gi|17065422|gb|AAL32865.1| Unknown protein [Arabidopsis thaliana]
gi|20148541|gb|AAM10161.1| unknown protein [Arabidopsis thaliana]
Length = 268
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 72/98 (73%), Gaps = 3/98 (3%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI--AEGTP 224
M+L VD LK+TEIGKAVNGLRKH S +IR LA+TLI WK+LVD+WVN TK I AEGTP
Sbjct: 1 MSLNVDILKSTEIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTP 60
Query: 225 DSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQVF 262
+S NPSV+DEEE PS P D + FT G E+S F
Sbjct: 61 ESANPSVLDEEEAFPSLPYD-VDIFTPEPNGFEISHFF 97
>gi|449534389|ref|XP_004174145.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like, partial [Cucumis sativus]
Length = 102
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 73/102 (71%), Gaps = 8/102 (7%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI--AEGTP 224
MAL+VDTL+ATEIGKAVN LRKHGSK+IRHLAR LI WK++VD WV AT A+ AE TP
Sbjct: 1 MALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTP 60
Query: 225 DSVNPSVV------DEEEGLPSPPLDELAFFTGPSAGIELSQ 260
DS N S EEE LPSPP DE AFFT +ELSQ
Sbjct: 61 DSKNKSAAVKEEDDYEEECLPSPPSDEAAFFTTQPTSMELSQ 102
>gi|293333575|ref|NP_001170689.1| uncharacterized protein LOC100384760 [Zea mays]
gi|238006942|gb|ACR34506.1| unknown [Zea mays]
gi|414887863|tpg|DAA63877.1| TPA: hypothetical protein ZEAMMB73_493349 [Zea mays]
Length = 343
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 128/263 (48%), Gaps = 39/263 (14%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
M S D W +FR A ++FD ID A+ VAA D P + RRD IAE+LFT L +
Sbjct: 1 MAPPSRDYWLGFFRGAGDNVFDAIDAAITVAASDHPAALRERRDGIAERLFTALLVTGA- 59
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIA 122
+ + + V + S D A
Sbjct: 60 ---------------------------------AGAGAAAGQGGSAGRTPVPSLCSSDRA 86
Query: 123 EALTDE--IEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIG 180
EA+TD+ + V+ E RIK +L D+S+S L E LRRLQ + L DTL T IG
Sbjct: 87 EAVTDDGAPRGDDPVLAETERIKAVLLGGHDKSESELLELLRRLQELDLAFDTLDVTAIG 146
Query: 181 KAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVDEEE--G 237
KAV+ RKH SKQIR L R+LIEGWK VD W+ + A+ + TP S+ PS ++++E G
Sbjct: 147 KAVSNFRKHSSKQIRTLVRSLIEGWKRTVDMWIARRREAVVDQTPQSMGPSSLEDQEDRG 206
Query: 238 LPSPPLDELAFFTGPSAGIELSQ 260
+DE F PS I LS+
Sbjct: 207 AAFTHMDEGDLFATPSTTIRLSE 229
>gi|414591025|tpg|DAA41596.1| TPA: hypothetical protein ZEAMMB73_569231 [Zea mays]
Length = 258
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 130/262 (49%), Gaps = 17/262 (6%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
M S D W +FR A +IFD I+ A+ VAA D P + RRD IAE+LFT L +
Sbjct: 1 MAPPSRDYWLGFFRGAGDNIFDAIEAAITVAASDHPAALRERRDGIAERLFTALLVTSAA 60
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIA 122
A + + + V S S D A
Sbjct: 61 AAAAGAAAAAPGGGAAGGTPVAGAPTPAQLHPEGAASVPS-------------LCSSDRA 107
Query: 123 EALTDEIEE--ESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIG 180
EA+ D+ + V+ E RIK +L + +++ ++ L E LRRLQ + L DTL AT IG
Sbjct: 108 EAIADDAAPRCDDPVLAETERIKAVLLSDQEKPEAELLELLRRLQELDLAFDTLDATAIG 167
Query: 181 KAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNPSVVDEEE-GL 238
KAV RKH SKQIR+L R+LIE WK VD W+ + A+ + TP S+ PS +++E+ G
Sbjct: 168 KAVANFRKHSSKQIRNLVRSLIEDWKHTVDVWIAHRRDAVVDQTPQSMGPSSLEQEDRGA 227
Query: 239 PSPPLDELAFFTGPSAGIELSQ 260
S +DE F PS I LS+
Sbjct: 228 ASTHMDEGDLFATPSTTIRLSE 249
>gi|23237912|dbj|BAC16486.1| unknown protein [Oryza sativa Japonica Group]
gi|50509934|dbj|BAD30255.1| unknown protein [Oryza sativa Japonica Group]
Length = 435
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 130/262 (49%), Gaps = 39/262 (14%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
M S+D W +FR A IFD ID A+ VAA D P + RRD IAE+L+T L +
Sbjct: 1 MAPPSMDYWLGFFRGAGDSIFDAIDAAIAVAASDHPAALRSRRDAIAERLYTAHLVPGAP 60
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIA 122
+ + E S S +S R A
Sbjct: 61 PAGPPAGGGAAAADAPTAQLL----LHPEGAASVPSLCSSDR-----------------A 99
Query: 123 EALTDE----IEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
E +TD+ ++ V E RIK IL N +++S++ L E LRRLQ + LTVDTL TE
Sbjct: 100 EVITDDGAVPRRDDDPVAAETERIKAILLNDQEKSEATLLELLRRLQQLELTVDTLTVTE 159
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGL 238
IGKAV+ RKH SKQIRHL R LIEGWK +VDEW+++ AI +E GL
Sbjct: 160 IGKAVSSYRKHNSKQIRHLVRLLIEGWKRIVDEWMSSRDAI--------------DERGL 205
Query: 239 PSPPLDELAFFTGPSAGIELSQ 260
SP +DE A F PS I LS+
Sbjct: 206 SSPSMDEGALFATPSTSIRLSE 227
>gi|222626137|gb|EEE60269.1| hypothetical protein OsJ_13304 [Oryza sativa Japonica Group]
Length = 370
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVN 228
TVD ++ TEIG AV LRKHGSKQIR L R+LI+GWK +V++WVN AI + TP S++
Sbjct: 50 FTVDAIRVTEIGTAVKPLRKHGSKQIRQLVRSLIDGWKAVVNDWVNNGGAIVDHTPQSMD 109
Query: 229 PSVVDEEE-GLPSPPLDELAFFTGPSAGIELSQVFLMA 265
S +++EE GLPSPP+DE AFF P I+LS+V L A
Sbjct: 110 GSCLEQEEGGLPSPPMDEAAFFATPCTSIQLSEVLLCA 147
>gi|125525425|gb|EAY73539.1| hypothetical protein OsI_01421 [Oryza sativa Indica Group]
Length = 195
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 107/209 (51%), Gaps = 38/209 (18%)
Query: 7 SLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-----TCKLTRCS 61
++ WR FR A DI+D+I +A+++A D P+E RR I E LF T +
Sbjct: 9 GMERWREMFRGA--DIYDVIRNAILIAGADSPRELLRRRQGIIEWLFAVAPVTVPVPAPL 66
Query: 62 GCDRV---------ELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQI 112
C RV A+P G D+ D F A ++ S ++
Sbjct: 67 ACGRVVDGAGNRLPPAAIPDGGGHHHDDNDGN-----FAAAEAQTSLIDQ---------- 111
Query: 113 VSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVD 172
I EAL DEIEE++QV+ EVLRIK+IL N +++S LF+ LRRLQLM L++
Sbjct: 112 -------QILEALYDEIEEDTQVINEVLRIKDILINYKEQSVDTLFDGLRRLQLMRLSIS 164
Query: 173 TLKATEIGKAVNGLRKHGSKQIRHLARTL 201
LK+T+I +AV L KH S I +AR L
Sbjct: 165 VLKSTQIAEAVAPLNKHRSPVICKIARDL 193
>gi|414877094|tpg|DAA54225.1| TPA: hypothetical protein ZEAMMB73_919257 [Zea mays]
Length = 232
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 112/216 (51%), Gaps = 23/216 (10%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLT-----RCSG 62
L+ WR FR + DI+D+I A++VAA D P+EF+ RRD I E+++T R +G
Sbjct: 20 LEPWRELFR--DRDIYDVISKAILVAATDSPQEFRRRRDGIVEQIYTAPTVPVPQGRAAG 77
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVS------NF 116
+R A ++ C E SK+ + H + S
Sbjct: 78 -ERSGRAALEVSDKGSKVASCTVVAPADEGNNSKKKGTAAAHHQHANGNGDSADTDAFGA 136
Query: 117 SSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRD---------ESDSVLFESLRRLQLM 167
S D ++L +E++ E+Q + EVLRIKEIL N + +S LF+SLRRLQLM
Sbjct: 137 SGMDWLQSLAEEMDAETQQIDEVLRIKEILLNHHELAWFFVIVAQSSDTLFDSLRRLQLM 196
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIE 203
LT D +K+TEIG A+ +RKH S +IR L +++
Sbjct: 197 QLTADKIKSTEIGGAIAAMRKHKSHKIRMLVHKIVK 232
>gi|302772344|ref|XP_002969590.1| hypothetical protein SELMODRAFT_440817 [Selaginella moellendorffii]
gi|300163066|gb|EFJ29678.1| hypothetical protein SELMODRAFT_440817 [Selaginella moellendorffii]
Length = 918
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALTDE+EEES+ + E+ RIK + + DE D L E+L RL+ M ++ + LKATEIG+
Sbjct: 160 EALTDEMEEESRRIKEINRIKNQISHFADEED-YLCEALERLESMHISFEALKATEIGRP 218
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
VN LRKH S ++R + + L+ GWK L +EW + + A GT + + D GLPSPP
Sbjct: 219 VNNLRKHPSLRVRSIVKRLVSGWKTLAEEWTKSAEHFAGGTNATGH---FDNNYGLPSPP 275
Query: 243 LDELAFFTGPSAGIELSQVF 262
+DE +A +E++++F
Sbjct: 276 VDEGELLAAGTAPLEVNKLF 295
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF--TCKLTRCSGCD 64
+D W+++F+S+ DI+ +ID A+ +AA++ P E + RRD+ EK+F T LT CD
Sbjct: 1 MDKWKSFFQSSGSDIWTVIDRAITIAAVEQPGELRARRDKFTEKMFCPTAHLTGLCECD 59
>gi|302774887|ref|XP_002970860.1| hypothetical protein SELMODRAFT_441268 [Selaginella moellendorffii]
gi|300161571|gb|EFJ28186.1| hypothetical protein SELMODRAFT_441268 [Selaginella moellendorffii]
Length = 915
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
EALTDE+EEES+ + E+ RIK + + DE D L E+L RL+ M ++ + LKATEIG+
Sbjct: 160 EALTDEMEEESRRIKEINRIKNQISHFADEED-YLCEALERLESMHISFEALKATEIGRP 218
Query: 183 VNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
VN LRKH S ++R + + L+ GWK L +EW + + A GT + + D GLPSPP
Sbjct: 219 VNNLRKHPSLRVRSIVKRLVSGWKTLAEEWTKSAEHFAGGTNATGH---FDNNYGLPSPP 275
Query: 243 LDELAFFTGPSAGIELSQVF 262
+DE +A +E++++F
Sbjct: 276 VDEGELLAAGTAPLEVNKLF 295
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF--TCKLTRCSGCD 64
+D W+++F+S+ DI+ +ID A+ +AA++ P E + RRD+ EK+F T LT CD
Sbjct: 1 MDKWKSFFQSSGSDIWTVIDRAITIAAVEQPAELRARRDKFTEKMFCPTAHLTGLCECD 59
>gi|297791353|ref|XP_002863561.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309396|gb|EFH39820.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 92/152 (60%), Gaps = 15/152 (9%)
Query: 31 MVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDDEEDCKRDGC-- 88
MVAA DCP +FK R D+IAE LF+C+++RC GCD +EL++ +E + G
Sbjct: 1 MVAATDCPNKFKSRGDKIAELLFSCRVSRCIGCDHLELSIHGDDEANRGRGTTGDGGGGT 60
Query: 89 ----EFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKE 144
++E GGSKESK N + ++ F D A AL+DEIEE S V +V IKE
Sbjct: 61 AVDEDYEVGGSKESKAN------IRLLVIYTF---DEAHALSDEIEELSVVSKDVASIKE 111
Query: 145 ILHNSRDESDSVLFESLRRLQLMALTVDTLKA 176
IL N D+ +SVL +SLR L+LM+L VD LK
Sbjct: 112 ILLNKEDDPNSVLLDSLRHLKLMSLNVDILKV 143
>gi|242052661|ref|XP_002455476.1| hypothetical protein SORBIDRAFT_03g011500 [Sorghum bicolor]
gi|241927451|gb|EES00596.1| hypothetical protein SORBIDRAFT_03g011500 [Sorghum bicolor]
Length = 239
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 113/229 (49%), Gaps = 50/229 (21%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
L+ WR FR DI+D+I+ A++VAA D P EF+ RRD I +++T R
Sbjct: 28 LEPWRELFRGR--DIYDVIEKAILVAATDSPHEFRRRRDGIVGQIYTA---------RTV 76
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSC----------RDDHVSNQIVSNFS 117
AVP G + R G E SK+ SC +D +
Sbjct: 77 PAVPQGRAAGE------RSGRALEVSDKAGSKLASCTVAPAEEPEDNNDKKKGIAAAQHG 130
Query: 118 SGDI----------------AEALTDEIEEESQVVGEVLRIKEILHNSRDE-----SDSV 156
+GD ++L+D+++ E+Q + EVLRIKEIL N ++ + SV
Sbjct: 131 NGDGDNNTDDTAYGAIGMEWLQSLSDQMDAETQEINEVLRIKEILLNHPEQFSVIVAQSV 190
Query: 157 --LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIE 203
LF+SLRRLQLM LT D +K+TEIG A+ + KH S +IR L +I+
Sbjct: 191 DNLFDSLRRLQLMQLTADKIKSTEIGGAIVAVSKHKSHKIRMLVHEIIK 239
>gi|222637546|gb|EEE67678.1| hypothetical protein OsJ_25317 [Oryza sativa Japonica Group]
Length = 321
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 170 TVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNP 229
TVDTL TEIGKAV+ RKH SKQIRHL R LIEGWK +VDEW+++ AI + TP S++P
Sbjct: 22 TVDTLTVTEIGKAVSSYRKHNSKQIRHLVRLLIEGWKRIVDEWMSSRDAIVDHTPQSMHP 81
Query: 230 SVVDEEE-GLPSPPLDELAFFTGPSAGIELSQ 260
S ++++E GL SP +DE A F PS I LS+
Sbjct: 82 SGLEQDERGLSSPSMDEGALFATPSTSIRLSE 113
>gi|125555096|gb|EAZ00702.1| hypothetical protein OsI_22728 [Oryza sativa Indica Group]
Length = 148
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 100/208 (48%), Gaps = 60/208 (28%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
+D W +FR A +IFD A+ VAA + P + RRD IA++L+T R DR
Sbjct: 1 MDYWLFFFRGAGDNIFD----AIAVAASEHPAALRSRRDAIAQRLYTAYRRRS---DR-- 51
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
N DD GG C +D V+
Sbjct: 52 -----ANVIADD-------------GGV------PCHEDPVA------------------ 69
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
E RIK +L N +++S++ L E LR LQ + LTVDTL TEIGKAV+ R
Sbjct: 70 ---------AETERIKAVLLNDQEKSEATLLELLRSLQQLELTVDTLMVTEIGKAVSSYR 120
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWVNA 215
KH S QIRHL + LIEGWK ++DEW+++
Sbjct: 121 KHNSNQIRHLVQLLIEGWKRILDEWMSS 148
>gi|359493121|ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 29/205 (14%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVEL 68
D +R+ S+ D++ +I+ AV VA++D +EFK RRD I E+L+T ++RC CDR +
Sbjct: 4 DEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCDRDRI 63
Query: 69 AVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTDE 128
P+G+ ++ D +D E S E + D
Sbjct: 64 HKPNGDRSVKEKMDQLQDESWIETPESVERDRDGSID----------------------- 100
Query: 129 IEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRK 188
EE+S++ L IKE L + D+ + L + L+ L M +T LK T+IG+ VN LRK
Sbjct: 101 -EEQSKI----LAIKERLEDP-DQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRK 154
Query: 189 HGSKQIRHLARTLIEGWKDLVDEWV 213
H S ++R L + L+ WKDLVDEWV
Sbjct: 155 HPSNEVRRLVKQLVRKWKDLVDEWV 179
>gi|302759146|ref|XP_002962996.1| hypothetical protein SELMODRAFT_404483 [Selaginella moellendorffii]
gi|300169857|gb|EFJ36459.1| hypothetical protein SELMODRAFT_404483 [Selaginella moellendorffii]
Length = 377
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 121/247 (48%), Gaps = 45/247 (18%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
L+ WR++FR D++ +ID + +AA D P + + RRD IAEKLF +
Sbjct: 7 LEFWRSFFRDLEHDLWTVIDRGIAIAAADYPDKLRERRDGIAEKLFQ------------Q 54
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVN----SCRDDHVSNQIVSNFSSGDIAE 123
+A P+G E+ + + S+ S+++ +C DH V + SG+
Sbjct: 55 IACPAG-----PIEEEEEEAAVLRGSVSRHSEISPAITAC--DHEYGNSVMDMGSGN--- 104
Query: 124 ALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAV 183
V EV +IK+ L + D++D + E L RL + L+++TLKATEIGK V
Sbjct: 105 --------REGDVKEVFKIKKELVDL-DKNDDDILELLVRLTDLNLSIETLKATEIGKPV 155
Query: 184 NGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPL 243
N LR+HG QI+ AR LI WK + DEW + + +G + P+ PP+
Sbjct: 156 NNLRRHGCDQIKSAARKLIRSWKAVADEWAKSLDDV-QGNDEQCTPA---------PPPI 205
Query: 244 DELAFFT 250
DE F
Sbjct: 206 DEDELFA 212
>gi|413955650|gb|AFW88299.1| hypothetical protein ZEAMMB73_008462 [Zea mays]
Length = 184
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 101/198 (51%), Gaps = 22/198 (11%)
Query: 6 GSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDR 65
SLD WR +F A IFD ID A+ VAA D P + RRD IAE+L+T
Sbjct: 9 ASLDYWRCFFSGARASIFDAIDAAIRVAAADHPDALRARRDAIAERLYTAI--------- 59
Query: 66 VELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEAL 125
+A+P+ E + E S S +S R ++V+N G L
Sbjct: 60 --VALPATQEAPGQSTPGQPALLLPEGAASVPSLCSSDR-----AEVVNNDGGG---APL 109
Query: 126 TDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNG 185
T+ + VV E RIK L N++D+S++ L E L RL + TVD ++AT IG V
Sbjct: 110 TN---SDDDVVAEAFRIKAALSNAQDKSEAELLELLGRLGQLEFTVDAIRATGIGMDVRP 166
Query: 186 LRKHGSKQIRHLARTLIE 203
LRKHGSKQIR L R+LIE
Sbjct: 167 LRKHGSKQIRQLVRSLIE 184
>gi|302797152|ref|XP_002980337.1| hypothetical protein SELMODRAFT_420079 [Selaginella moellendorffii]
gi|300151953|gb|EFJ18597.1| hypothetical protein SELMODRAFT_420079 [Selaginella moellendorffii]
Length = 377
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 114/245 (46%), Gaps = 41/245 (16%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
L+ WR++FR D++ +ID + +AA D P + + RRD IAEKLF R + E
Sbjct: 7 LEFWRSFFRDLEHDLWTVIDRGIAIAAADFPDKLRERRDGIAEKLFQQIACRAGPIEEEE 66
Query: 68 --LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEAL 125
AV G+ E C+ E G S V + SG+
Sbjct: 67 EEAAVLRGSVSRHSEISPAITACDHEYGNS-----------------VMDMGSGN----- 104
Query: 126 TDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNG 185
V EV +IK+ L + D++D + E L RL + L+++TLKATEIGK VN
Sbjct: 105 ------REGDVKEVFKIKKELVDL-DKNDDDILELLVRLTDLNLSIETLKATEIGKPVNN 157
Query: 186 LRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDE 245
LR+HG QI+ AR LI WK + DEW + + +G + P+ PP+DE
Sbjct: 158 LRRHGCDQIKSAARKLIRSWKAVADEWAKSLDDV-QGNDEQCTPA---------PPPIDE 207
Query: 246 LAFFT 250
F
Sbjct: 208 DELFA 212
>gi|449448454|ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
Length = 345
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF--TCKLTRCSGCDR 65
LD++R +A D++ ID A+ VA+LD + K RRD I E+L+ T +RC CD
Sbjct: 6 LDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNCDT 65
Query: 66 VELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEAL 125
D D + +GCE + G + + + + Q V D A+
Sbjct: 66 ------------DRNHDGRSNGCEIKQGSGEVKEASPS-----TPQFVVVEGDDDGADPY 108
Query: 126 TDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNG 185
++E + +VL IKE L + D+ L E L+ L M +T LK T+IG+ VN
Sbjct: 109 AGLFDDEQK---KVLEIKEQLEIPQQPEDA-LVELLQNLADMDITFQALKETDIGRHVNR 164
Query: 186 LRKHGSKQIRHLARTLIEGWKDLVDEWV 213
LRKH S +R L + L+ WK++VDEWV
Sbjct: 165 LRKHPSNDVRRLVKHLVRKWKEIVDEWV 192
>gi|326508028|dbj|BAJ86757.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 5/119 (4%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN---ATKAIAEGTPD 225
TV TLK T IGK V LRKH SKQIRHL R LI GWK +VDEW++ + AI + TP
Sbjct: 25 FTVHTLKVTAIGKTVTSLRKHNSKQIRHLVRLLIGGWKSIVDEWMSNGGSGDAIVDHTPQ 84
Query: 226 SVNPSVVDEEE-GLPSPPLDELAFFTGPSAGIELSQVFLMAWMILEILETVGNSSRTVK 283
S++PS +++E+ G+ SP +DE A F PS I LS+ + M + ++ GN+ +V+
Sbjct: 85 SMHPSSLEQEDRGMSSPSVDEGALFATPSTSIRLSEDNQGSRM-FDGMDDAGNTRNSVQ 142
>gi|302794781|ref|XP_002979154.1| hypothetical protein SELMODRAFT_444137 [Selaginella moellendorffii]
gi|302813676|ref|XP_002988523.1| hypothetical protein SELMODRAFT_447387 [Selaginella moellendorffii]
gi|300143630|gb|EFJ10319.1| hypothetical protein SELMODRAFT_447387 [Selaginella moellendorffii]
gi|300152922|gb|EFJ19562.1| hypothetical protein SELMODRAFT_444137 [Selaginella moellendorffii]
Length = 384
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCK-----LTRCSG 62
++ WR +F ++ D++ +ID A+ +AA++ PKE ++RRD AEKLF T C G
Sbjct: 1 MERWRLFFENSGEDLWSVIDWALTIAAVNYPKELRMRRDGFAEKLFAPSNYPLVATNCGG 60
Query: 63 CDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIA 122
+ L AGGS D + N + ++A
Sbjct: 61 GAPLLL-----------------------AGGSDRKDSLDRDHDDDQGEEEENADARNLA 97
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKA 182
A D EE V EVL I + L ++E L + + RL+ + ++V LK T IG
Sbjct: 98 PADDD---EEEAVRREVLSIGQTLERDQNEPAEKLLKPIERLEQLQISVQALKVTGIGMI 154
Query: 183 VNGLRK-HGSKQIRHLARTLIEGWKDLVDEWV 213
VN LRK H S +++ + L++ WKD+VDEW
Sbjct: 155 VNKLRKHHKSSRVKAGCKKLVKLWKDVVDEWA 186
>gi|9758963|dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 46/225 (20%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKL-TRCSGCDRV 66
LD++R+ +A D++ ID A++VA+LD +E K RRD I E+L+ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD-- 60
Query: 67 ELAVPSGNEFDDDEEDCKRDGCEFEAGGS-KESKVNSCRDDHVSNQIVSNFSSGDIAEAL 125
F GG+ E+ + + V + G + A
Sbjct: 61 -----------------------FGGGGNVTEAAIGRVNNGRVHEETEEEDEEG-VTAAA 96
Query: 126 TDEIEEESQVVGE-----------------VLRIKEILHNSRDESDSVLFESLRRLQLMA 168
+E+ E+S V + ++ IKE L + D S+ L E L+ L+ M
Sbjct: 97 EEEVREKSVNVEDDDDFDPFAGLFDDEQKSIVEIKEKLEDP-DLSEESLVELLQNLEDMD 155
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
+T L+ T+IG+ VN +RKH S +R LA+ L++ WK+ VDEWV
Sbjct: 156 ITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWV 200
>gi|414591026|tpg|DAA41597.1| TPA: hypothetical protein ZEAMMB73_569231, partial [Zea mays]
Length = 392
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Query: 113 VSNFSSGDIAEALTDEIEE--ESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALT 170
V + S D AEA+ D+ + V+ E RIK +L + +++ ++ L E LRRLQ + L
Sbjct: 98 VPSLCSSDRAEAIADDAAPRCDDPVLAETERIKAVLLSDQEKPEAELLELLRRLQELDLA 157
Query: 171 VDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK-AIAEGTPDSVNP 229
DTL AT IGKAV RKH SKQIR+L R+LIE WK VD W+ + A+ + TP S+ P
Sbjct: 158 FDTLDATAIGKAVANFRKHSSKQIRNLVRSLIEDWKHTVDVWIAHRRDAVVDQTPQSMGP 217
Query: 230 SVVDEEE-GLPSPPLDELAFFTGPSAGIELSQ 260
S +++E+ G S +DE F PS I LS+
Sbjct: 218 SSLEQEDRGAASTHMDEGDLFATPSTTIRLSE 249
>gi|18416107|ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26c
gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 353
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 46/225 (20%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKL-TRCSGCDRV 66
LD++R+ +A D++ ID A++VA+LD +E K RRD I E+L+ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD-- 60
Query: 67 ELAVPSGNEFDDDEEDCKRDGCEFEAGGS-KESKVNSCRDDHVSNQIVSNFSSGDIAEAL 125
F GG+ E+ + + V + G + A
Sbjct: 61 -----------------------FGGGGNVTEAAIGRVNNGRVHEETEEEDEEG-VTAAA 96
Query: 126 TDEIEEESQVVGE-----------------VLRIKEILHNSRDESDSVLFESLRRLQLMA 168
+E+ E+S V + ++ IKE L + D S+ L E L+ L+ M
Sbjct: 97 EEEVREKSVNVEDDDDFDPFAGLFDDEQKSIVEIKEKLEDP-DLSEESLVELLQNLEDMD 155
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
+T L+ T+IG+ VN +RKH S +R LA+ L++ WK+ VDEWV
Sbjct: 156 ITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWV 200
>gi|356512793|ref|XP_003525100.1| PREDICTED: uncharacterized protein LOC100820221 [Glycine max]
Length = 313
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 45/216 (20%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-TCKLTRCSGCDRVE 67
+++R+ SA D++ ++D A+ VA++D P E K RRDRI E+L+ + L +C CD
Sbjct: 4 EDFRSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNCD--- 60
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
P+ E + S+ S+ + +
Sbjct: 61 ---PNAGEI----------------------------------RTQSSPSAEEEKDPYGG 83
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
++EE + ++L IKE L + DS L E L+ L M +T L+ ++IG+ VN LR
Sbjct: 84 FMDEEQK---KILYIKEQLEDPHQSEDS-LVELLQNLADMDITFPALEESDIGRYVNRLR 139
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGT 223
KH S ++ L + L+ WK++VDEWV GT
Sbjct: 140 KHSSNDVKRLVKLLVRKWKEIVDEWVKLKSPGYPGT 175
>gi|357464499|ref|XP_003602531.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491579|gb|AES72782.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
Length = 226
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF---TCKLTRCSGCD 64
LD++R+ +A D++ ID A+ VAA D E K RRD I E+L+ T + C CD
Sbjct: 3 LDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQNCD 62
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
+ V + N+ + + GG+ + + G
Sbjct: 63 GGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEGNEDGEDEEIDPYGG----- 117
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
L D+ +++ +L IKE+L + +S+ L E L+ L + +T LK T+IG+ VN
Sbjct: 118 LFDDEQKK------ILEIKELLEDPH-QSEDTLMELLQNLVDIDITFQELKETDIGRNVN 170
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGT 223
LRKH S +R L + L++ WK++VD+WV + T
Sbjct: 171 QLRKHPSSDVRRLVKLLVKKWKEIVDDWVKQNPQRGKST 209
>gi|356516327|ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max]
Length = 361
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF--TCKLTRCSGCDR 65
LD++R+ +A D++ ID A+ VA+ D E K RRD I E+L+ T +C CD
Sbjct: 3 LDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRICDD 62
Query: 66 VELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSG----DI 121
GN+ + + + + + + + Q + N + G D
Sbjct: 63 ------GGNDLNGHQIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEEDLDP 116
Query: 122 AEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGK 181
L D+ +++ +L IKE L D+S+ L E L+ L M +T LK T+IG+
Sbjct: 117 YGGLFDDEQKK------ILEIKEQLEEP-DQSEDSLVELLQSLADMDITFQALKETDIGR 169
Query: 182 AVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
VN LRKH S +R L + L+ WK++VDEWV
Sbjct: 170 HVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWV 201
>gi|357464497|ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491578|gb|AES72781.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
Length = 357
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF---TCKLTRCSGCD 64
LD++R+ +A D++ ID A+ VAA D E K RRD I E+L+ T + C CD
Sbjct: 3 LDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQNCD 62
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
+ V + N+ + + GG+ + + G
Sbjct: 63 GGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEGNEDGEDEEIDPYGG----- 117
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVN 184
L D+ +++ +L IKE+L + +S+ L E L+ L + +T LK T+IG+ VN
Sbjct: 118 LFDDEQKK------ILEIKELLEDPH-QSEDTLMELLQNLVDIDITFQELKETDIGRNVN 170
Query: 185 GLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGT 223
LRKH S +R L + L++ WK++VD+WV + T
Sbjct: 171 QLRKHPSSDVRRLVKLLVKKWKEIVDDWVKQNPQRGKST 209
>gi|297811087|ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKL-TRCSGCDR- 65
LD++R+ +A D++ ID A++VA+LD +E K RRD I E+L+ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62
Query: 66 -----VELAVPSGN---EFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFS 117
E AV N + +EED + A +E VN DD
Sbjct: 63 GGGSVTEAAVGRVNGRVHEETEEEDEEAAAAAAAAEEVREKSVNVEDDDDF--------- 113
Query: 118 SGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKAT 177
D L D+ E++S +L IKE L + D S+ L E L+ L+ M +T L+ T
Sbjct: 114 --DPFAGLFDD-EQKS-----ILEIKEKLEDP-DLSEESLVELLQNLEDMDITFQALQET 164
Query: 178 EIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
+IG+ VN +RKH S +R LA+ L++ WK+ VDEWV
Sbjct: 165 DIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWV 200
>gi|359476965|ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD-RVE 67
D +R R++ D+++ I+ A+ VA D E + RRD I E+++ +RC C+ R +
Sbjct: 4 DEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMS--SRCGSCNLRYQ 61
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
SG + GC+ E K+ + + ++ Q ++ S D L D
Sbjct: 62 H---SGLD----------KGCDEEKEDEKDDEKDKSP---LTPQSINRSGSEDRYGGLLD 105
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
E E +L IKE L + D+ D + + L+ L M +T LK T+IG+ VN LR
Sbjct: 106 EEE------ARILDIKEHL-EAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLR 158
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
KH S +R L + L+ WKDLVDEWV + A
Sbjct: 159 KHPSNDVRRLVKHLVRKWKDLVDEWVKSNPA 189
>gi|296088637|emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD-RVE 67
D +R R++ D+++ I+ A+ VA D E + RRD I E+++ +RC C+ R +
Sbjct: 4 DEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMS--SRCGSCNLRYQ 61
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
SG + GC+ E K+ + + ++ Q ++ S D L D
Sbjct: 62 H---SGLD----------KGCDEEKEDEKDDEKDKSP---LTPQSINRSGSEDRYGGLLD 105
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
E E +L IKE L + D+ D + + L+ L M +T LK T+IG+ VN LR
Sbjct: 106 EEE------ARILDIKEHL-EAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLR 158
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
KH S +R L + L+ WKDLVDEWV + A
Sbjct: 159 KHPSNDVRRLVKHLVRKWKDLVDEWVKSNPA 189
>gi|147768575|emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]
Length = 333
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD-RVE 67
D +R R++ D+++ I+ A+ VA D E + RRD I E+++ +RC C+ R +
Sbjct: 4 DEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMS--SRCGSCNLRYQ 61
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
SG + GC+ E K+ + + ++ Q ++ S D L D
Sbjct: 62 H---SGLD----------KGCDEEKEDEKDDEKDKS---PLTPQSINRSGSEDRCGGLPD 105
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
E E +L IKE L + D+ D + + L+ L M +T LK T+IG+ VN LR
Sbjct: 106 EEE------ARILDIKEHL-EAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLR 158
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
KH S +R L + L+ WKDLVDEWV + A
Sbjct: 159 KHPSNDVRRLVKHLVRKWKDLVDEWVKSNPA 189
>gi|225431398|ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCD-RVE 67
D +R R++ D+++ I+ A+ VA D E + RRD I E+++ +RC C+ R +
Sbjct: 4 DEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMYMS--SRCGSCNLRYQ 61
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
SG + GC+ E K+ + + ++ Q ++ S D L D
Sbjct: 62 H---SGLD----------KGCDEEKEDEKDDEKDKSP---LTPQSINRSGSEDRYGGLLD 105
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
E E +L IKE L + D+ D + + L+ L M +T LK T+IG+ VN LR
Sbjct: 106 EEE------ARILDIKEHL-EAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLR 158
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
KH S +R L + L+ WKDLVDEWV + A
Sbjct: 159 KHPSNDVRRLVKHLVRKWKDLVDEWVKSNPA 189
>gi|356509008|ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max]
Length = 356
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF--TCKLTRCSGCDR 65
LD++R+ +A D++ ID A+ VA+ D + K RRD I E+L+ T C CD
Sbjct: 3 LDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNCD- 61
Query: 66 VELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSC--RDDHVSNQIVSNFSSGDIAE 123
E + +G + K+S+ + R H S S + +
Sbjct: 62 --------------EGGHRLNGHRIK----KQSRHSPSPERQPHRSTATASPATPQSLDN 103
Query: 124 ALTDEIEEESQVVG--------EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLK 175
++ +E+ G ++L IKE L D+S+ L E L+ L M +T LK
Sbjct: 104 GEDEDNDEDLDPYGGLLDDEQKKILEIKEQLEEP-DQSEDSLVELLQSLADMDITFQGLK 162
Query: 176 ATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
T+IG+ VN LRKH S +R L + L+ WK++VDEWV
Sbjct: 163 ETDIGRHVNRLRKHPSNDLRRLVKLLVRKWKEIVDEWV 200
>gi|312281771|dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
Length = 348
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 37/218 (16%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
LD++R+ +A D++ ID A++VA+LD +E K RRD I E+L+ +
Sbjct: 3 LDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMA--------- 53
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGG----SKESKVNSCRDDHVSNQIVSNFSSGDIAE 123
C+ C+F +GG + ++VN + + +
Sbjct: 54 -------------NKCR--NCDFGSGGIVTEAAVARVNGRIHEETEEEEGEAAEEEVREK 98
Query: 124 ALTDEIEEESQVVG--------EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLK 175
++ + +++ +L IKE L + D S+ L E L+ L+ M +T L+
Sbjct: 99 SVNGDDDDDFDPFAGLFDDEQKSILEIKERLEDP-DLSEEALVELLQNLEDMDITFQALQ 157
Query: 176 ATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
T+IG+ VN +RKH S +R LA+ L++ WK+ VDEWV
Sbjct: 158 ETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWV 195
>gi|242084884|ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
gi|241943560|gb|EES16705.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
Length = 348
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 44/222 (19%)
Query: 21 DIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAV----PSGNEF 76
D++D++D A+ AA D P E + RRD I ++L+ RC CD P+G
Sbjct: 19 DVWDLVDAALAAAARDSPAELRARRDGIVQRLYAGS-ARCRNCDADAPPPPAAQPNG--- 74
Query: 77 DDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVV 136
+ + + D+ V A++L DE E ++ V
Sbjct: 75 --------------AVAAAPAAASPASPDEEVD------------ADSLDDEEEADAGVE 108
Query: 137 GEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRH 196
++L IK+ L + D+S+ + L+ L M +T L+ T+IG+ VNGLRKH S ++R
Sbjct: 109 SKILAIKDFLEDP-DQSEDEMVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQ 167
Query: 197 LARTLIEGWKDLVDEWVNATKA--------IAEG-TPDSVNP 229
L + L+ WK++VD+WV + I++G +PD V P
Sbjct: 168 LVKLLVRKWKEIVDDWVRLHNSGGDVGGSIISDGDSPDKVQP 209
>gi|255578426|ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical protein [Ricinus communis]
Length = 362
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
+D++R+ S+ D++ ID A++VA+LD E K RRD+I E L++ C +
Sbjct: 3 VDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSS----SGRCRNCD 58
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
L V N +G E + ESK + + + + + D
Sbjct: 59 LDVGRIN-----------NGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVND 107
Query: 128 EIEEESQVVG-------------EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTL 174
+ +++ G ++L IK+ L + D+S+ L + L+ L M +T L
Sbjct: 108 DDDDDDDDDGLDPYAGLFDDEQKKILEIKQHLEDP-DQSEDSLVDLLQSLADMDITFKAL 166
Query: 175 KATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
K T+IG+ VN LRKH S +R L + L+ WKD+VDEWV
Sbjct: 167 KETDIGRHVNQLRKHTSNDVRRLVKQLVRKWKDIVDEWV 205
>gi|224060453|ref|XP_002300207.1| predicted protein [Populus trichocarpa]
gi|222847465|gb|EEE85012.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 21/213 (9%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGC-DRV 66
+D++R+ S+ D+++ ID A+ VA+LD E K RRD I +LF + CS C DR
Sbjct: 3 IDDFRSILESSGVDVWNFIDTAIDVASLDFGSELKRRRDDIVARLFAAS-SSCSRCRDR- 60
Query: 67 ELAVPSGNEFDDDEEDCKRDGCEFE--AGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEA 124
FDD + + +G + A + R + + + +GD +
Sbjct: 61 --------SFDDIDINNTANGNGMKDLAEKESSHEEEKGRRVYADSPVTPRSVNGDGDDE 112
Query: 125 LTDEI----EEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIG 180
D ++E + ++L IK+ L + D+ + L + L+ L M +T LK T+IG
Sbjct: 113 ELDPFGGLFDDEPK---KILDIKQQLEDL-DQPEDSLVDLLQSLADMDITFQALKETDIG 168
Query: 181 KAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
+ VN LRKH S ++ L + L+ WK++VD+WV
Sbjct: 169 RHVNRLRKHPSNDVKRLVKQLVRKWKEIVDDWV 201
>gi|356525574|ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796457 [Glycine max]
Length = 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 48/218 (22%)
Query: 9 DNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF--TCKLTRCSGCDRV 66
+++R+ SA D++ ++D A+ VA+ D E K RRD I E+L+ + C CD
Sbjct: 4 EDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNCD-- 61
Query: 67 ELAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALT 126
AG E + S S D L
Sbjct: 62 -------------------------AGDGGEIRTQSS---------PSAEEEKDPYGGLF 87
Query: 127 DEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGL 186
D+ + + +L IKE L + DS L E L+ L M +T L+ T+IG+ VN L
Sbjct: 88 DDEQRK------ILDIKEQLEDPHQSEDS-LVELLQNLADMDITFQALEETDIGRHVNRL 140
Query: 187 RKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTP 224
RKH S ++ L + L+ WK++VDEWV K A G P
Sbjct: 141 RKHSSNDVKRLVKLLVRKWKEIVDEWV---KLKAPGEP 175
>gi|224126771|ref|XP_002329469.1| predicted protein [Populus trichocarpa]
gi|222870149|gb|EEF07280.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVE 67
+D++R S+ D++ ID A++VA+LD E K RRD I E+LF + DR
Sbjct: 3 IDDFRLILESSGVDVWTFIDTAIVVASLDFGSELKRRRDDIVERLFASSSSCSRCRDRSL 62
Query: 68 LAVPSGNEFDDDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTD 127
+ N + DE + E E+ +E D V+ + V+ D +
Sbjct: 63 NDINMNNTSNGDE---IKGLVEKESSHEEEKGTRVAADSPVTPRSVNGDGDDDELDPYGG 119
Query: 128 EIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR 187
++E + ++L IK+ L + D+ + L + L+ L M +T LK T+IG+ VN LR
Sbjct: 120 LFDDEPK---KILVIKQQLEDI-DQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRLR 175
Query: 188 KHGSKQIRHLARTLIEGWKDLVDEWV 213
KH S +R L + L+ WK++VD+WV
Sbjct: 176 KHPSNDVRRLVKQLVRKWKEIVDDWV 201
>gi|242067543|ref|XP_002449048.1| hypothetical protein SORBIDRAFT_05g004000 [Sorghum bicolor]
gi|241934891|gb|EES08036.1| hypothetical protein SORBIDRAFT_05g004000 [Sorghum bicolor]
Length = 358
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 20 GDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDD 79
GD++ ++D A+ AA D P + + RRD I E+L+ CS C + + D
Sbjct: 16 GDMWALVDAALDAAARDRPDDLRARRDGIVERLYAAATAGCSNCAGRPPPLAALAAAGLD 75
Query: 80 EEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEV 139
EED G + + +S V+ + ++ +G E + + ++
Sbjct: 76 EED-----------GEEAAPASSA----VALEAEADAQAGGAEERAEELGAGAPGLESKI 120
Query: 140 LRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLAR 199
+ I++ L + D L L+ L M +T L+ T+IG+ VNGLRKH S ++R L +
Sbjct: 121 VAIRDFLDDPNQPEDE-LVRLLQSLADMDVTYSALQETDIGRQVNGLRKHSSAEVRRLVK 179
Query: 200 TLIEGWKDLVDEWVNATKAIAEGT 223
LI WK++VDEWV + ++G+
Sbjct: 180 QLIRKWKEIVDEWVRLHNSGSDGS 203
>gi|224089943|ref|XP_002308875.1| predicted protein [Populus trichocarpa]
gi|222854851|gb|EEE92398.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 171 VDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEG-TPDSVNP 229
++ L TEIG V+ LRKH SKQI A LI WK+ D++ +T AI E P
Sbjct: 25 INHLHVTEIGIIVSALRKHKSKQISQFAERLIRDWKNKTDDYFQSTAAIVESFAPSDSTL 84
Query: 230 SVVDEEEGLPSPPLDEL--AFFTGPSAGIELSQVFLMAWMILEILETVGNSSRTVKVEEN 287
S EE GLP+ PLD++ FF+ G L + L +W + ++ N +V N
Sbjct: 85 SFACEEVGLPALPLDDINAVFFSQIPMGA-LKVLGLASWKFFDEIDHDKNPQNSVDT-VN 142
Query: 288 LQWRTKISQSGNSKL 302
++ R+++++ N ++
Sbjct: 143 VKNRSQLTKEANMQV 157
>gi|343172619|gb|AEL99013.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 139 VLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
+ IKE L + + DS L + L+ L M +T LK T+IG+ VN LRKH S +R L
Sbjct: 58 IFSIKEQLEDPKQTDDS-LVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRQLV 116
Query: 199 RTLIEGWKDLVDEWVNATKA 218
+ L+ WKDLVDEWV A A
Sbjct: 117 KLLVRKWKDLVDEWVRANTA 136
>gi|343172617|gb|AEL99012.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 139 VLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
+ IKE L + +++D L + L+ L M +T LK T+IG+ VN LRKH S +R L
Sbjct: 58 IFSIKEQLEDP-NQTDDSLVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRQLV 116
Query: 199 RTLIEGWKDLVDEWVNATKA 218
+ L+ WKDLVDEWV A A
Sbjct: 117 KLLVRKWKDLVDEWVRANTA 136
>gi|125555320|gb|EAZ00926.1| hypothetical protein OsI_22956 [Oryza sativa Indica Group]
Length = 276
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 148 NSRDESDS--VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
N R +S S + E LR LQ + +T +TL+A++IGKA++GLRKH S+Q+R LA L + W
Sbjct: 96 NPRSDSSSSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSSEQVRDLAAALYKSW 155
Query: 206 KDLVDE 211
K LVDE
Sbjct: 156 KALVDE 161
>gi|20043009|gb|AAM08817.1|AC090486_27 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|20303624|gb|AAM19051.1|AC099774_13 putative transcription factor [Oryza sativa Japonica Group]
gi|125574379|gb|EAZ15663.1| hypothetical protein OsJ_31076 [Oryza sativa Japonica Group]
Length = 276
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 148 NSRDESDS--VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
N R +S S + E LR LQ + +T +TL+A++IGKA++GLRKH S+Q+R LA L + W
Sbjct: 96 NPRSDSSSSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSSEQVRDLAAALYKSW 155
Query: 206 KDLVDE 211
K LVDE
Sbjct: 156 KALVDE 161
>gi|108708321|gb|ABF96116.1| expressed protein [Oryza sativa Japonica Group]
gi|215767872|dbj|BAH00101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 204 GWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEG-LPSPPLDELAFFTGPSAGIELSQVF 262
GWK +V++WVN AI + TP S++ S +++EEG LPSPP+DE AFF P I+LS+ F
Sbjct: 8 GWKAVVNDWVNNGGAIVDHTPQSMDGSCLEQEEGGLPSPPMDEAAFFATPCTSIQLSEFF 67
>gi|297801250|ref|XP_002868509.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314345|gb|EFH44768.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 315
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 68/162 (41%), Gaps = 66/162 (40%)
Query: 38 PKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKE 97
PK FK RR++I+E LF+C++ RC CD +EL +P DDEE GC
Sbjct: 136 PKRFKSRREKISELLFSCRVNRCIRCDHLELTIPG-----DDEEGEANLGCGVAG----- 185
Query: 98 SKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVL 157
DD V+ I SVL
Sbjct: 186 -------DDGVTRPI------------------------------------------SVL 196
Query: 158 FESLRRLQLMALTVDTLK-------ATEIGKAVNGLRKHGSK 192
ESLR+LQLM+L +D LK +TEIGKAVNG+ SK
Sbjct: 197 LESLRKLQLMSLNLDILKVLRFFFQSTEIGKAVNGVGSRNSK 238
>gi|413925704|gb|AFW65636.1| hypothetical protein ZEAMMB73_434126 [Zea mays]
Length = 355
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 37/194 (19%)
Query: 38 PKEFKLRRDRIAEKLFTCKLTRCSGC----DRVELAVPSGNEFDDDEEDCKRDG---CEF 90
P E + RRD I E+L+ CS C V +G E +D EE +
Sbjct: 34 PDELRARRDSIVERLYAAAAG-CSNCAGRPPSVAALAAAGLEEEDGEEAAPASPWAEADA 92
Query: 91 EAGGSK-ESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNS 149
+AGG++ +++V + + ++IV A+ D +E+ +Q E++ +
Sbjct: 93 QAGGAEAQTEVLGAGEPDLESKIV----------AIRDFLEDPNQPENELVSL------- 135
Query: 150 RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L+ L M +T + L+ T+IG+ VNGLRKH S ++R L + LI WK++V
Sbjct: 136 -----------LQNLADMDVTYNALQETDIGRQVNGLRKHPSAEVRRLVKQLIRKWKEIV 184
Query: 210 DEWVNATKAIAEGT 223
D+WV + +G+
Sbjct: 185 DDWVRLDNSGGDGS 198
>gi|110288880|gb|ABG66008.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 417
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 148 NSRDESDS--VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
N R +S S + E LR LQ + +T +TL+A++IGKA++GLRKH S+Q+R LA L + W
Sbjct: 96 NPRSDSSSSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSSEQVRDLAAALYKSW 155
Query: 206 KDLVDE 211
K LVDE
Sbjct: 156 KALVDE 161
>gi|226495529|ref|NP_001143974.1| uncharacterized protein LOC100276791 [Zea mays]
gi|195634779|gb|ACG36858.1| hypothetical protein [Zea mays]
gi|413925705|gb|AFW65637.1| hypothetical protein ZEAMMB73_434126 [Zea mays]
Length = 356
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 37/194 (19%)
Query: 38 PKEFKLRRDRIAEKLFTCKLTRCSGC----DRVELAVPSGNEFDDDEEDCKRDG---CEF 90
P E + RRD I E+L+ CS C V +G E +D EE +
Sbjct: 34 PDELRARRDSIVERLYAAAAG-CSNCAGRPPSVAALAAAGLEEEDGEEAAPASPWAEADA 92
Query: 91 EAGGSK-ESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNS 149
+AGG++ +++V + + ++IV A+ D +E+ +Q E++ +
Sbjct: 93 QAGGAEAQTEVLGAGEPDLESKIV----------AIRDFLEDPNQPENELVSL------- 135
Query: 150 RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L+ L M +T + L+ T+IG+ VNGLRKH S ++R L + LI WK++V
Sbjct: 136 -----------LQNLADMDVTYNALQETDIGRQVNGLRKHPSAEVRRLVKQLIRKWKEIV 184
Query: 210 DEWVNATKAIAEGT 223
D+WV + +G+
Sbjct: 185 DDWVRLDNSGGDGS 198
>gi|326523085|dbj|BAJ88583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 347
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 127 DEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGL 186
+EI++ + + ++L I++ L + D+S+ L L+ L M +T L+ T+IG+ VNGL
Sbjct: 98 EEIDDGAGLESKILAIRDFLEDP-DQSEEELVSLLQNLADMDITYKALQETDIGRHVNGL 156
Query: 187 RKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEG 222
RKH S +R L + L+ WK++VD WV + +G
Sbjct: 157 RKHPSGDVRQLVKLLVRKWKEIVDGWVRLHNSGGDG 192
>gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 139 VLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
++ IKE L + D S+ L E L+ L+ M +T L+ T+IG+ VN +RKH S +R LA
Sbjct: 76 IVEIKEKLEDP-DLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLA 134
Query: 199 RTLIEGWKDLVDEWV 213
+ L++ WK+ VDEWV
Sbjct: 135 KQLVKKWKETVDEWV 149
>gi|108862240|gb|ABA95890.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 334
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L I++ L + D+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 103 KILAIRDFLEDP-DQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQL 161
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEG 222
+ L+ WK++VD+WV + +G
Sbjct: 162 VKLLVRKWKEIVDDWVRLHNSGGDG 186
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 20 GDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-TCKLTRCSGCD 64
D++D++D A+ AA D P E + RRD I E+L+ T RC CD
Sbjct: 18 ADVWDLVDAALASAARDRPAELRARRDGIVERLYATAAGGRCGNCD 63
>gi|62734379|gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group]
gi|77548900|gb|ABA91697.1| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 339
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L IK+ L + D+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 102 KILAIKDFLEDE-DQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLL 160
Query: 198 ARTLIEGWKDLVDEWV 213
+ LI WK++VD+WV
Sbjct: 161 VKQLIRKWKEIVDDWV 176
>gi|218185312|gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indica Group]
Length = 338
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L IK+ L + D+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 101 KILAIKDFLEDE-DQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLL 159
Query: 198 ARTLIEGWKDLVDEWV 213
+ LI WK++VD+WV
Sbjct: 160 VKQLIRKWKEIVDDWV 175
>gi|226498412|ref|NP_001143340.1| uncharacterized protein LOC100275944 [Zea mays]
gi|195617136|gb|ACG30398.1| hypothetical protein [Zea mays]
gi|195618500|gb|ACG31080.1| hypothetical protein [Zea mays]
Length = 357
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L I++ L + D+S+ + L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 119 KILAIRDFLEDP-DQSEDDIVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQL 177
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEGT 223
+ L+ WK++VD+WV + +G+
Sbjct: 178 VKLLVRKWKEIVDDWVRLHNSGGDGS 203
>gi|357160752|ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
distachyon]
Length = 342
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 22 IFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRV-ELAVPSGNEFD--- 77
+++++D A+ A P E + RRD I E+L+ +RC CD V +LA
Sbjct: 21 VWELVDAALASAP---PAELRARRDGIVERLYAAG-SRCRNCDAVPQLARQPAAAAAAAL 76
Query: 78 DDEEDCKRDGCEFEAGGSKESKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVG 137
EED DG + + +E +
Sbjct: 77 SPEEDADVDGLG--------------------------------EDEEEADDDEAAGAES 104
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L I++ L + D+S+ L L+ L M +T L+ T+IG+ VN LRKH S ++R L
Sbjct: 105 KILAIRDFLEDP-DQSEDELVSLLQNLADMDITYKALQDTDIGRHVNSLRKHPSGEVRQL 163
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEG 222
+ L+ WK++VD WV + +G
Sbjct: 164 VKLLVRKWKEIVDGWVRLHNSGGDG 188
>gi|125578614|gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japonica Group]
Length = 241
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L I++ L + D+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 4 KILAIRDFLEDP-DQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQL 62
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEG 222
+ L+ WK++VD+WV + +G
Sbjct: 63 VKLLVRKWKEIVDDWVRLHNSGGDG 87
>gi|115487514|ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|108862239|gb|ABA95889.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|125535897|gb|EAY82385.1| hypothetical protein OsI_37597 [Oryza sativa Indica Group]
Length = 340
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L I++ L + D+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 103 KILAIRDFLEDP-DQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQL 161
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEG 222
+ L+ WK++VD+WV + +G
Sbjct: 162 VKLLVRKWKEIVDDWVRLHNSGGDG 186
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 21 DIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF-TCKLTRCSGCD 64
D++D++D A+ AA D P E + RRD I E+L+ T RC CD
Sbjct: 19 DVWDLVDAALASAARDRPAELRARRDGIVERLYATAAGGRCGNCD 63
>gi|115484349|ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group]
gi|113644540|dbj|BAF27681.1| Os11g0166800, partial [Oryza sativa Japonica Group]
Length = 238
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
++L IK+ L + D+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L
Sbjct: 1 KILAIKDFLEDE-DQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLL 59
Query: 198 ARTLIEGWKDLVDEWV 213
+ LI WK++VD+WV
Sbjct: 60 VKQLIRKWKEIVDDWV 75
>gi|449533566|ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 240
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
Query: 208 LVDEWVNATKAI--AEGTPDSVNPSVV------DEEEGLPSPPLDELAFFTGPSAGIELS 259
+VD WV AT A+ AE TPDS N S EEEGLPSPPLDE AFFT +ELS
Sbjct: 1 MVDLWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELS 60
Query: 260 QVF 262
Q F
Sbjct: 61 QFF 63
>gi|297791863|ref|XP_002863816.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309651|gb|EFH40075.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 331
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 69/162 (42%), Gaps = 66/162 (40%)
Query: 38 PKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDDEEDCKRDGCEFEAGGSKE 97
PK FK RR++I+E LF+C++ RC D +EL +P DDEE GC AG
Sbjct: 158 PKRFKSRREKISELLFSCRVNRCIRFDHLELTIPR-----DDEEGEANLGCGV-AG---- 207
Query: 98 SKVNSCRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVL 157
DD V+ I SVL
Sbjct: 208 -------DDGVTRPI------------------------------------------SVL 218
Query: 158 FESLRRLQLMALTVDTLK-------ATEIGKAVNGLRKHGSK 192
ESLR+LQLM+L +D LK +TEIGKAVNG+ SK
Sbjct: 219 LESLRKLQLMSLNLDILKVLRFFFQSTEIGKAVNGVGSRNSK 260
>gi|77553096|gb|ABA95892.1| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L + L+ WK++VD+
Sbjct: 5 QSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDD 64
Query: 212 WVNATKAIAEG 222
WV + +G
Sbjct: 65 WVRLHNSGGDG 75
>gi|108862241|gb|ABA95891.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 229
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
+S+ L L+ L M +T L+ T+IG+ VNGLRKH S ++R L + L+ WK++VD+
Sbjct: 5 QSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDD 64
Query: 212 WVNATKAIAEG 222
WV + +G
Sbjct: 65 WVRLHNSGGDG 75
>gi|297807211|ref|XP_002871489.1| hypothetical protein ARALYDRAFT_909137 [Arabidopsis lyrata subsp.
lyrata]
gi|297317326|gb|EFH47748.1| hypothetical protein ARALYDRAFT_909137 [Arabidopsis lyrata subsp.
lyrata]
Length = 155
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 20/82 (24%)
Query: 31 MVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPSGNEFDDD----------- 79
MVAA DCP +FK D+ A+ LF+C++ RC GCD +EL+VP +E +
Sbjct: 1 MVAATDCPNKFKSIGDKFAQLLFSCRVGRCIGCDHLELSVPGDDEANRGRGTTGDGGGGT 60
Query: 80 --EEDCKRDGCEFEAGGSKESK 99
+ED +E GGSKESK
Sbjct: 61 AVDED-------YEVGGSKESK 75
>gi|218187994|gb|EEC70421.1| hypothetical protein OsI_01423 [Oryza sativa Indica Group]
Length = 283
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 202 IEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQV 261
I GWK + +WV A+ A A+ +PD NPS V+++ GLP+PP+D AFF SA +
Sbjct: 7 IRGWKGVAADWVGASSANADTSPDISNPSTVEDDFGLPTPPMDVGAFFLPQSAAEQYVSE 66
Query: 262 FL 263
FL
Sbjct: 67 FL 68
>gi|14589373|gb|AAK70628.1|AC091238_6 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|31430561|gb|AAP52455.1| hypothetical protein LOC_Os10g10270 [Oryza sativa Japonica Group]
Length = 261
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Query: 125 LTDEIE----EESQVVGEVLRIKEIL-------HNSRDESDSVLFESLRRLQLMALTVDT 173
L DE E ++S + EV RIK L S D S+ + E LR L+ +T +T
Sbjct: 41 LCDEQELRRAKKSSMAEEVERIKGKLVGGEDGGRPSSDSSEETVVELLRALRSTPMTFET 100
Query: 174 LKATEIGKAVNGL-RKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+A+ IGK ++GL RKH S+++R LA L + WK +VDE +
Sbjct: 101 LEASRIGKTISGLRRKHSSEKVRGLAAALYKNWKAIVDEHLT 142
>gi|115453145|ref|NP_001050173.1| Os03g0364700 [Oryza sativa Japonica Group]
gi|113548644|dbj|BAF12087.1| Os03g0364700, partial [Oryza sativa Japonica Group]
Length = 274
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 134 QVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ 193
+V E R+K L N+++++++ L E LR LQ + TVD ++ TEIG AV LRKHGSKQ
Sbjct: 205 RVAAEAFRVKAALSNAQEKTEAELLELLRALQQLEFTVDAIRVTEIGTAVKPLRKHGSKQ 264
Query: 194 IRHLARTLIE 203
IR L R+LIE
Sbjct: 265 IRQLVRSLIE 274
>gi|242084758|ref|XP_002442804.1| hypothetical protein SORBIDRAFT_08g003130 [Sorghum bicolor]
gi|241943497|gb|EES16642.1| hypothetical protein SORBIDRAFT_08g003130 [Sorghum bicolor]
Length = 371
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVDE 211
+V+ ESLR LQ + +T + L+AT+IG+AVN LRK S+Q R LA L GWK L DE
Sbjct: 30 AVVVESLRELQDVHMTFEALEATKIGRAVNTLRKSAASEQARRLAAALYTGWKALADE 87
>gi|413916115|gb|AFW56047.1| hypothetical protein ZEAMMB73_697365 [Zea mays]
Length = 1067
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 133 SQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK 192
S V+ V RI L +R++ + V+ E +R LQ + +T + L+AT+IG VN LRK
Sbjct: 9 SDVLATVARIDRRL--AREKDNDVVVELIRELQAVDMTYEVLEATKIGHTVNALRKSAPT 66
Query: 193 QI-RHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
+ R LA TL WK L +EW+ + + N + SPP
Sbjct: 67 ALARLLADTLYRQWKVLANEWITISTTQQQQPSPPPNTDTDSNKRSSSSPP 117
>gi|222615579|gb|EEE51711.1| hypothetical protein OsJ_33093 [Oryza sativa Japonica Group]
Length = 210
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
M +T L+ T+IG+ VNGLRKH S ++R L + LI WK++VD+WV
Sbjct: 1 MDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWV 47
>gi|14589372|gb|AAK70627.1|AC091238_5 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|31430560|gb|AAP52454.1| expressed protein [Oryza sativa Japonica Group]
Length = 295
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 148 NSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWK 206
S D S+ + + LR LQ + +T +TL+A++I K ++GLRKH S+++R LA L + WK
Sbjct: 100 TSADSSEDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWK 159
Query: 207 DLVDE 211
+VDE
Sbjct: 160 AIVDE 164
>gi|125531305|gb|EAY77870.1| hypothetical protein OsI_32914 [Oryza sativa Indica Group]
Length = 295
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 148 NSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWK 206
S D S+ + + LR LQ + +T +TL+A++I K ++GLRKH S+++R LA L + WK
Sbjct: 100 TSADSSEDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWK 159
Query: 207 DLVDE 211
+VDE
Sbjct: 160 AIVDE 164
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-QIR 195
E++RI K++ ++ +S + L+ L+ + +T++ L++T IG +VN +RK + ++
Sbjct: 8 EIIRIAKKMDKMAQKKSGVGALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVT 67
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNP-SVVDEEEGLPSP 241
LA+ LI+ WK L+DE K++ E +S P S+V +G P P
Sbjct: 68 SLAKALIKSWKKLLDEPGGGDKSLEEKRKESSTPTSLVSPTQGSPEP 114
>gi|413916112|gb|AFW56044.1| hypothetical protein ZEAMMB73_677944 [Zea mays]
Length = 342
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 135 VVGEVLRIKEILHNSRDESDS-VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ 193
VV V RI L +R ++D+ + + +R L+ + +T + L+AT IG+ VNGLRK
Sbjct: 20 VVATVERISRRL--ARKQADNQAVVDLIRELEALPMTYEALEATMIGRTVNGLRKTAPSA 77
Query: 194 I-RHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
+ R LA TL WK L EW ++K + P + + + + L SPP
Sbjct: 78 LARLLADTLYRQWKALAHEWHASSKTQPQTAPPEAD-NGIKKRPSLSSPP 126
>gi|297604507|ref|NP_001055548.2| Os05g0414100 [Oryza sativa Japonica Group]
gi|255676367|dbj|BAF17462.2| Os05g0414100 [Oryza sativa Japonica Group]
Length = 198
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 8 LDNWRNYFRSANGD--IFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTC-KLTRC-SGC 63
LD WR R A G I D+I++A++VAA D P+E RRDRI E LFT + C GC
Sbjct: 5 LDRWRELLRGAAGSAGICDVIENAILVAAADAPQELLRRRDRICEILFTAPRAPPCHHGC 64
Query: 64 DRVELAVPS 72
P+
Sbjct: 65 GSAATPTPA 73
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 25/29 (86%)
Query: 123 EALTDEIEEESQVVGEVLRIKEILHNSRD 151
EALT+EI+EESQVVGEVLRIK++ + D
Sbjct: 168 EALTNEIDEESQVVGEVLRIKDLFLHKED 196
>gi|413916104|gb|AFW56036.1| hypothetical protein ZEAMMB73_101493 [Zea mays]
Length = 345
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 135 VVGEVLRIKEILHNSRDESDS-VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ 193
VV + RI L +R ++D+ + + +R LQ + +T + L+AT IG+ VNGLRK
Sbjct: 20 VVATLERIGRKL--ARKQADNQAVVDLIRELQAVPMTYEALEATMIGRTVNGLRKTAPSA 77
Query: 194 I-RHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVN 228
+ R LA TL WK L EW ++K P++ N
Sbjct: 78 LARLLADTLYRQWKALAHEWHASSKTPTPMLPEADN 113
>gi|125574196|gb|EAZ15480.1| hypothetical protein OsJ_30893 [Oryza sativa Japonica Group]
Length = 295
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVDE 211
LR LQ + +T +TL+A++I K ++GLRKH S+++R LA L + WK +VDE
Sbjct: 113 LRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWKAIVDE 164
>gi|327285776|ref|XP_003227608.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Anolis carolinensis]
Length = 767
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L ++L+RL + +TVD L T +GK VNGLRKH +Q+ A+ L+ WK LV A
Sbjct: 25 LMKNLKRLSELPITVDILLETGVGKTVNGLRKH--EQVGDFAKNLVARWKKLVPVPPEAE 82
Query: 217 KAIAEGTPDSVNPSVVDEEEGLPSP 241
+ E S + S+ + + PSP
Sbjct: 83 RHNHEPADRSYDRSIQRKRQRDPSP 107
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 148 NSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ-IRHLARTLIEGWK 206
NS +ES S L L++L +T+D L+ T IG VN LRK ++ ++ +A++LI+ WK
Sbjct: 22 NSNNESASDLLNQLKKL---PITLDILQKTRIGMTVNVLRKASDREDVQIIAKSLIKSWK 78
Query: 207 DLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAF 248
L+D + K A+ P++ + +V+ + + P + +A
Sbjct: 79 KLLD---SQDKVKAKSIPENDSSTVISSNQDIKKPSSNSVAM 117
>gi|432905685|ref|XP_004077466.1| PREDICTED: uncharacterized protein LOC101169481 [Oryzias latipes]
Length = 381
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 134 QVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ 193
+VV +++R K L N+ + + + + L++L+ + +T++ L T IGK VN R+H KQ
Sbjct: 5 EVVKKIVRFKLQLSNATE--PATVLKILQKLKDLDVTLEILAETGIGKTVNSFRRH--KQ 60
Query: 194 IRHLARTLIEGWKDLVDEWVNATK 217
+A+ L++GWK+LV + ++K
Sbjct: 61 AGEVAKALVKGWKNLVPKEFTSSK 84
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSRDE--SDSV--LFESLRRLQLMALTVDTLKATEIG 180
LT E + +Q E++ I +L R + SDS + + L+RL M + + L++T IG
Sbjct: 1336 LTPETYKSTQ--SELITITFVLDKLRGDKSSDSCAKIVKLLKRLGKMDVMLTDLRSTSIG 1393
Query: 181 KAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
KAVN LRKH Q++ L+ L E W DL+D+
Sbjct: 1394 KAVNKLRKHDDAQVKALSSKLKEKWTDLMDK 1424
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI K+I ++ ++ S + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 8 EIIRIAKKIDKMAQKKNGSGALDLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDEEVT 67
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE 236
LA++LI+ WK L+DE + K E + P + +E
Sbjct: 68 SLAKSLIKSWKKLLDEPGSGEKTSEEKRKEQSTPIISSSQE 108
>gi|225717168|gb|ACO14430.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 226
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-QIR 195
E++RI K++ ++ +S + L+ L+ + +T++ L++T IG +VN +RK + ++
Sbjct: 8 EIIRIAKKMDKMAQKKSGVGALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVT 67
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSP 241
LA+ LI+ WK L+DE K+ + S S V +G P P
Sbjct: 68 SLAKALIKSWKKLLDEPGGGDKSEEKRKEPSTPTSTVSPSQGSPEP 113
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI K+I ++ ++ + + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 8 EVIRIAKKIDKMAQKKNGAGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 67
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEG 237
LA++LI+ WK L+DE KA E + P VV +G
Sbjct: 68 SLAKSLIKSWKKLLDEPGAGDKASEEKRKEQSTP-VVSPSQG 108
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L SR +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|348507256|ref|XP_003441172.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oreochromis niloticus]
Length = 627
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 13/112 (11%)
Query: 133 SQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK 192
S VV +++R+K L S + + + L++L+ + +T+D L T IGK VN LR+H +
Sbjct: 5 SDVVKKIMRLK--LQLSDKAEPATVLKILQKLKDLDITLDVLAETGIGKTVNSLRRH--E 60
Query: 193 QIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVN---PSVVDEEEGLPSP 241
Q LA++L++GWK L+ + ++I+ G D ++ PSV D+ + SP
Sbjct: 61 QAGELAKSLVKGWKKLL-----SKESISRGE-DRLSEKVPSVKDKLDDQSSP 106
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L SR +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D T+
Sbjct: 30 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKTRDQ 89
Query: 220 AEGTPDSVNPS-----VVDEEEGLPSPP--LDELAFFTGPSAGIELSQV 261
GTP + S D P PP L T PS I V
Sbjct: 90 GRGTPLPTSSSKDTSGTTDLSCKKPDPPRTLSTPRITTFPSVPITCDAV 138
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 131 EESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG 190
+ESQ G+ I E+L +DE M T D ++ T+IG AV LR H
Sbjct: 14 QESQASGKTDVIIELLQTLKDE--------------MTATEDLIRVTKIGLAVGKLRSHD 59
Query: 191 SKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPS 230
+KQ+ L++ +++ WK V + A AE T PS
Sbjct: 60 NKQVSELSKEIVKKWKQDVTKKPKAAAPSAESTTTPAKPS 99
>gi|159163424|pdb|1WJT|A Chain A, Solution Structure Of The N-Terminal Domain I Of Mouse
Transcription Elongation Factor S-Ii Protein 3
Length = 103
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L SR +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 13 ELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 71
Query: 195 RHLARTLIEGWKDLVDEWVNATKAIAEGTPDS 226
LA+ LI+ WK L+D TK E P S
Sbjct: 72 VSLAKVLIKNWKRLLDS-PRTTKGERESGPSS 102
>gi|405957816|gb|EKC23996.1| Transcription elongation factor B polypeptide 3 [Crassostrea gigas]
Length = 712
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
+ ++LR K L NS DE L E+L ++ + +TVD L+ T+IGK +NGLRK +
Sbjct: 5 IESKILRYKSRLQNSTDEGK--LQETLLKIADLPITVDILQRTKIGKVINGLRKRDG-DL 61
Query: 195 RHLARTLIEGWKDLV 209
+A++++ WK +V
Sbjct: 62 GFIAKSIVSEWKSMV 76
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|108999103|ref|XP_001112160.1| PREDICTED: transcription elongation factor A protein 3 [Macaca
mulatta]
Length = 248
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKHTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|395521661|ref|XP_003764934.1| PREDICTED: transcription elongation factor B polypeptide 3
[Sarcophilus harrisii]
Length = 764
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L+RL + +TVD L T +GK VNGLRKH +Q+ A+ L+ WK LV
Sbjct: 5 LLKHLKRLSDLPITVDILAETGVGKTVNGLRKH--EQVGGFAKDLVARWKKLV 55
>gi|357117475|ref|XP_003560493.1| PREDICTED: uncharacterized protein LOC100840985 [Brachypodium
distachyon]
Length = 314
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK-DLVDEW 212
D V+ ESL L+L L +TE+ KAV LRKH S+++R LAR + GW+ L D
Sbjct: 65 DEVMAESLETLRLAPAMPTVLASTELAKAVAALRKHDSERVRVLARGIFSGWRASLQDNL 124
Query: 213 VNATKAI 219
V A+
Sbjct: 125 VRVRAAM 131
>gi|431891277|gb|ELK02154.1| Transcription elongation factor A protein 3 [Pteropus alecto]
Length = 264
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 146 LHNSRDESDSVLFES----LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLART 200
L +R +S L E LR L+ M +T+ L++T +G +VN LRK S +++ LA++
Sbjct: 19 LPKTRGKSPGCLQEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKS 78
Query: 201 LIEGWKDLVDEWVNATKAIAEGTP 224
LI+ WK L+D + GTP
Sbjct: 79 LIKSWKKLLDASDAKARERGRGTP 102
>gi|293332815|ref|NP_001170393.1| uncharacterized protein LOC100384379 [Zea mays]
gi|224035599|gb|ACN36875.1| unknown [Zea mays]
Length = 377
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
D V+ ESL+ L + + D L +TE+ + V L HGS +IR LAR ++ GW+ V+
Sbjct: 104 DDVMVESLKTLLVAPVPHDLLASTELARTVGALGSHGSSRIRSLARDVVRGWRVAVE 160
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI L +R S+ L L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIARKLEKMVARKNSEGALG-LLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|403258011|ref|XP_003921579.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Saimiri boliviensis
boliviensis]
Length = 208
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 6 IRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLVEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG VN LRKH ++ +LAR + WK +++ N
Sbjct: 65 ELKKKIPSREVLKSTKIGHTVNKLRKHSDSEVAYLAREVYTEWKTFIEKHSN 116
>gi|332244802|ref|XP_003271560.1| PREDICTED: transcription elongation factor A protein 3 [Nomascus
leucogenys]
Length = 295
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|224139686|ref|XP_002323228.1| predicted protein [Populus trichocarpa]
gi|224139694|ref|XP_002323231.1| predicted protein [Populus trichocarpa]
gi|222867858|gb|EEF04989.1| predicted protein [Populus trichocarpa]
gi|222867861|gb|EEF04992.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 3 MKSGSLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSG 62
M S LD WR +F AN +F++I +A+ VAA P+ KL+R I + +++ +
Sbjct: 1 MNSEGLDEWRQFFEGANRTMFEVISNAITVAAKGHPEGIKLKRGEIVQTVYSSLFSLHCR 60
Query: 63 CDRVELAVPSGNE 75
D +L P E
Sbjct: 61 HDHNDLTRPDKAE 73
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKRVARKKTEGAL-DLLKKLDSWQMSIQLLQTTRIGVAVNGVRKHCSNKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI WK L+D
Sbjct: 65 VALAKVLIRNWKQLLD 80
>gi|380792457|gb|AFE68104.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 168
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L SR +++ L + L++L +++ L+ T IG AV+G+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVSGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 90
Query: 220 AEGTP 224
GTP
Sbjct: 91 GRGTP 95
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 90
Query: 220 AEGTP 224
GTP
Sbjct: 91 GRGTP 95
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D T+
Sbjct: 87 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKTRER 146
Query: 220 AEGTP----------DSVNPSVVDEE-EGLPSPP 242
G P ++V+PS E +PS P
Sbjct: 147 GRGMPLPTSSSKDASEAVDPSRKRSEMPRMPSTP 180
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 90
Query: 220 AEGTP 224
GTP
Sbjct: 91 GRGTP 95
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 90
Query: 220 AEGTP 224
GTP
Sbjct: 91 GRGTP 95
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R +++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI WK L+D
Sbjct: 65 VALAKVLIRNWKQLLD 80
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 7 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 66
Query: 220 AEGTP 224
GTP
Sbjct: 67 GRGTP 71
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
+++RI K+I ++ ++ + + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 8 DIIRIAKKIDKMAQKKNGAGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 67
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEE 236
LA++LI+ WK L+DE K E + P + +E
Sbjct: 68 SLAKSLIKSWKKLLDEPGGGEKTSEEKRKEQSTPVISSSQE 108
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
S ++L++L+ +T DTL AT++GK + L KH ++I+ +A L+E WK +V E +
Sbjct: 32 SQCLDALKQLKKFPVTYDTLVATQVGKKLRSLSKHPVEEIKSVATDLLEIWKKVVIEETS 91
Query: 215 ATKAIA 220
K I
Sbjct: 92 KAKKIG 97
>gi|444728031|gb|ELW68495.1| Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
3 [Tupaia chinensis]
Length = 1027
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 932 ELLRIAKKLEKMVARKSTEGAL-DLLKKLNSCRMSIQLLQTTRIGVAVNGVRKHCSDKEV 990
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 991 VSLAKVLIKNWKRLLD 1006
>gi|390336480|ref|XP_797640.3| PREDICTED: uncharacterized protein LOC593051 [Strongylocentrotus
purpuratus]
Length = 910
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
L+RL+ + +TV L+ T +GKAVN LRK G +I + L++ W+DLV E + A
Sbjct: 33 LQRLERLPITVRVLQETGVGKAVNKLRKQGG-EITDAVKGLVQSWRDLVREAMEA 86
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L ++ +D + + L+ L+ M +T+D L++T IG +VN LRK S +++
Sbjct: 6 EIVRIAKRLDKMVAKKSADGAM-DLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 65 IALAKSLIKSWKKLLD 80
>gi|48476355|gb|AAT44402.1| rhabdomyosarcoma antigen MU-RMS-40.22 [Homo sapiens]
Length = 154
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|427788075|gb|JAA59489.1| Putative transcription elongation factor b polypeptide
[Rhipicephalus pulchellus]
Length = 577
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 144 EILHNSR----DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLAR 199
+ILH + ++SD + E+LR+LQ + +T++ L+ T IG+ VN L+K + I LAR
Sbjct: 7 KILHYGKRLEKNQSDEKVLETLRKLQKVPMTLNLLQDTGIGRTVNHLKK-NTGVIGELAR 65
Query: 200 TLIEGWKDLVDE 211
+I WK +V +
Sbjct: 66 AIISSWKQVVSD 77
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI L +R ++ L + L++L +++ L+ T IG AVNG+RKH S K++
Sbjct: 6 ELLRIARKLEKMVARKNTEGAL-DLLKKLDSCQMSIRLLQTTRIGVAVNGVRKHCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E LRI + L SR +++ L + L++L +++ L+ T IG AVNG+RKH S K +
Sbjct: 6 EPLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKVL 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ-I 194
++LRI + L SR+ D L + LR L+ +T+ L+ T IG +VNG+RKH + + +
Sbjct: 6 DLLRIAKKLDKMVSRNNMDGAL-DLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDV 64
Query: 195 RHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDE-----LAFF 249
+LA+ LI+ WK L++ N + +PS SP D + FF
Sbjct: 65 VNLAKILIKNWKRLLESAQNPKSERPNEVKNGSHPSKPSGSPSRTSPEKDSRKDAPVDFF 124
Query: 250 TGPS 253
PS
Sbjct: 125 PPPS 128
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 2 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 52
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D ++
Sbjct: 4 LRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQ 63
Query: 220 AEGTPDSVNPS-----VVDEEEGLPSPP 242
GTP + S D P PP
Sbjct: 64 GRGTPLPTSSSKDASRTTDLSCKKPDPP 91
>gi|395821365|ref|XP_003784013.1| PREDICTED: transcription elongation factor A protein 3 [Otolemur
garnettii]
Length = 326
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R + L + L++L +T+ L+ T IG AVNG+RKH S K+
Sbjct: 6 ELLRIAKKLEKMVARKNMEGAL-DLLKKLHSSQMTIQLLQTTRIGVAVNGVRKHCSDKEA 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VSLAKVLIKNWKRLLD 80
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 30 LKKLDSYQMSIQLLQTTRIGVAVNGIRKHCSDKEVVALAKILIKNWKQLLD 80
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D ++
Sbjct: 30 LRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQ 89
Query: 220 AEGTPDSVNPS-----VVDEEEGLPSPP 242
GTP + S D P PP
Sbjct: 90 GRGTPLPTSSSKDASRTTDLSCKKPDPP 117
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D ++
Sbjct: 30 LRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQ 89
Query: 220 AEGTPDSVNPS-----VVDEEEGLPSPP 242
GTP + S D P PP
Sbjct: 90 GRGTPLPTSSSKDASRTTDLSCKKPDPP 117
>gi|125574197|gb|EAZ15481.1| hypothetical protein OsJ_30894 [Oryza sativa Japonica Group]
Length = 166
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 169 LTVDTLKATEIGKAVNGLR-KHGSKQIRHLARTLIEGWKDLVDEWVN 214
+T +TL+A+ IGK ++GLR KH S+++R LA L + WK +VDE +
Sbjct: 1 MTFETLEASRIGKTISGLRRKHSSEKVRGLAAALYKNWKAIVDEHLT 47
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D ++
Sbjct: 30 LRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRDQ 89
Query: 220 AEGTPDSVNPS-----VVDEEEGLPSPP 242
GTP + S D P PP
Sbjct: 90 GRGTPLPTSSSKDASGTTDLSCKKPDPP 117
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T++ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 5 LRELKAMPVTLNLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKAREQ 64
Query: 220 AEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSA 254
+ G P + S E PS EL PSA
Sbjct: 65 SRGGPLPPSSSKEPPEAKDPSRKRPELPRM--PSA 97
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + + V + L+ L+ + +T++ L++T IG +VN +RK + ++
Sbjct: 8 EIIRIAKKMDKMAQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVT 67
Query: 196 HLARTLIEGWKDLVDEWV---NATKAIAEGTPDSVNPS 230
LA++LI+ WK L+DE N+ + E T V+PS
Sbjct: 68 SLAKSLIKSWKKLLDEPAADKNSEEKKKERTTPVVSPS 105
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 11 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 61
>gi|301610738|ref|XP_002934911.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Xenopus (Silurana) tropicalis]
Length = 508
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
V V ++KE L ++D ++++L L+ + +T+D L T IGK VNGLRKH ++
Sbjct: 6 TVQRVQQLKERLGRAQDTRK--IYKALSSLKELDITLDILVETGIGKTVNGLRKHS--EV 61
Query: 195 RHLARTLIEGWKDLVDE 211
+A++++ WK LV E
Sbjct: 62 GDVAKSIVIQWKKLVPE 78
>gi|431894647|gb|ELK04447.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 213
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ-IRHLARTLIEGWKDLVDEWVNAT 216
E L+ L+ M +T+ L++T +G +VN LRKH S + + LA++LI+ WK L+D
Sbjct: 1 MELLQELKAMPVTLHLLQSTRVGVSVNALRKHSSDEDVIALAKSLIKSWKKLLDASDAKA 60
Query: 217 KAIAEGTPDSVNPSVVDEEEGLPS 240
+ G P + S E G PS
Sbjct: 61 RERRRGGPLPTSSSKEASEAGDPS 84
>gi|355557663|gb|EHH14443.1| hypothetical protein EGK_00370, partial [Macaca mulatta]
gi|355745018|gb|EHH49643.1| hypothetical protein EGM_00341, partial [Macaca fascicularis]
Length = 750
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
L + L++L + +TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 2 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 58
>gi|426222788|ref|XP_004005564.1| PREDICTED: transcription elongation factor B polypeptide 3 [Ovis
aries]
Length = 758
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L++L + +TVD L T +GK VN LRKH + + + AR L+ WK LV
Sbjct: 9 LLKYLKKLSALPITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 59
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ + ++++TL++T +G +VN +RK S ++++ LA+TLI+ WK L+D
Sbjct: 30 LRELKNIKMSLETLQSTRVGMSVNAVRKQSSNEEVQTLAKTLIKSWKKLLD 80
>gi|301754948|ref|XP_002913387.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Ailuropoda melanoleuca]
Length = 756
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 156 VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+L + L++L + +TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 7 MLLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 58
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 18/128 (14%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIR 195
E++RI K++ + ++ + + L+ L+ + +T++ L++T IG +VN +RK G + +
Sbjct: 7 EIIRIAKKMERMVQKKNTAGALDLLKELKSLPMTLELLQSTRIGMSVNAIRKQSGEEDVT 66
Query: 196 HLARTLIEGWKDLVD-------EWVNATKAIAEGTPD-------SVNPSVVDEEEGLPSP 241
LA++LI+ WK L+D E A A+ +P+ S N V+ EE P+P
Sbjct: 67 SLAKSLIKSWKKLLDGPSADLEEKKKDQPAPAQNSPEAREESSSSTNFGVLKEE--CPAP 124
Query: 242 PLDELAFF 249
D + F
Sbjct: 125 SDDFITSF 132
>gi|301608648|ref|XP_002933890.1| PREDICTED: transcription elongation factor B polypeptide 3 [Xenopus
(Silurana) tropicalis]
Length = 706
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
L ++L+RL + +TVD L T IGK VNGLRKH + + LA+ L+ WK LV +
Sbjct: 25 LQKTLKRLGDLPITVDILVETGIGKTVNGLRKH--EFVGDLAKNLVAQWKKLVPQ 77
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 7 LKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 57
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ M +T+D L++T IG +VN LRK + +++ LA++LI+ WK L+D
Sbjct: 4 LKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVIALAKSLIKSWKKLLD 54
>gi|431891270|gb|ELK02147.1| Transcription elongation factor B polypeptide 3 [Pteropus alecto]
Length = 776
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L++L + +TVD L T +GK VN LRKH + + + AR L+ WK LV
Sbjct: 27 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 77
>gi|351705976|gb|EHB08895.1| Transcription elongation factor B polypeptide 3, partial
[Heterocephalus glaber]
Length = 750
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L++L + +TVD L T +GK VN RKH +Q+ AR L+ WK LV
Sbjct: 2 LLKYLKKLSTLPITVDILAETGVGKTVNSFRKH--EQVGSFARDLVAQWKKLV 52
>gi|388490268|ref|NP_001253782.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
gi|380809580|gb|AFE76665.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
gi|383415793|gb|AFH31110.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
Length = 208
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 6 VRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLIEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG VN +RKH ++ LAR + WK +++ N
Sbjct: 65 ELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYTEWKTFIEKHSN 116
>gi|426215588|ref|XP_004002053.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Ovis aries]
Length = 208
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 104 RDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRR 163
R + N G I + T E + V+ ++ R K +L D+S L E+LR
Sbjct: 7 RTPRIQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVEALRE 65
Query: 164 LQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG AVN +R+H ++ LAR + W+ + + VN
Sbjct: 66 LKKKIPSQEVLKSTKIGHAVNKMRQHSDSEVACLAREVYTEWRTFMKKHVN 116
>gi|357117473|ref|XP_003560492.1| PREDICTED: uncharacterized protein LOC100840684 [Brachypodium
distachyon]
Length = 268
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 117 SSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKA 176
+ GDI E L + ++++ E R+ IL D V+ ESL L+L+ L
Sbjct: 39 ARGDIVELLCNAMDDDR----EAERLCLIL-------DDVMAESLETLRLVPAMPTVLAK 87
Query: 177 TEIGKAVNGLRKHGSKQIRHLARTLIEGW-----KDLV---------DEWVNATKAIAEG 222
T+I KAV L+KH S+++R LAR ++ W DLV D+ + + +A+
Sbjct: 88 TDIAKAVRALQKHESERVRVLARGIVSRWGATFQDDLVRFRAATEKLDQIPMSDQIVADQ 147
Query: 223 TPDS---VNPSVVDEEEGLPSPPLDELAFFTGPSAGI 256
P S + PS + + PP P+ G+
Sbjct: 148 QPVSAKILQPSAKNTRKITEMPPPQPKKVSPAPAVGV 184
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQI 194
EVL I + L S+ +D+ L + L+ L+ + + +DTL+ T IG +VN +RK + ++
Sbjct: 8 EVLYIAKKLDKMVSKKSADNAL-DVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDEV 66
Query: 195 RHLARTLIEGWKDLVDEWVNATK 217
A+ LI+GWK LV E +A+K
Sbjct: 67 AIAAKQLIKGWKKLVSEPSSASK 89
>gi|348570792|ref|XP_003471181.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Cavia porcellus]
Length = 825
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L++L + +TVD L T +GK VN RKH +Q+ AR L+ WK LV
Sbjct: 77 LLKYLKKLSTLPITVDILAETGVGKTVNSFRKH--EQVGSFARDLVAQWKKLV 127
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 140 LRIK--EILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRH 196
L+IK IL N + D + + L+ L+ M +T+D L++T IG +VN LRK + ++
Sbjct: 73 LKIKGQTILKNGKPFQDGAV-DLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVIS 131
Query: 197 LARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 132 LAKSLIKSWKKLLD 145
>gi|355558029|gb|EHH14809.1| hypothetical protein EGK_00791, partial [Macaca mulatta]
Length = 237
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 35 VRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLIEALQ 93
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG VN +RKH ++ LAR + WK +++ N
Sbjct: 94 ELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYTEWKTFIEKHSN 145
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ M +T+D L++T IG +VN LRK + +++ LA++LI+ WK L+D
Sbjct: 7 LKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLD 57
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ M +T+D L++T IG +VN LRK + +++ LA++LI+ WK L+D
Sbjct: 30 LKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLD 80
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L ++ +D + + L+ L+ M +T+D L++T IG +VN LRK + ++
Sbjct: 7 EIVRIAKRLDKMVTKKSTDGAM-DLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEV 65
Query: 195 RHLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 66 ISLAKSLIKSWKKLLD 81
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L ++ +D + + L+ L+ M +T+D L++T IG +VN LRK + ++
Sbjct: 7 EIVRIAKRLDKMVTKKSTDGAM-DLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEV 65
Query: 195 RHLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 66 ISLAKSLIKSWKKLLD 81
>gi|402854650|ref|XP_003891976.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein 2
[Papio anubis]
Length = 208
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 6 IRTPRIQNSPQKKDSGGKVYKXATIESLKRVVVVEDIKRWKTMLELP-DQTKENLIEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG VN +RKH ++ LAR + WK +++ N
Sbjct: 65 ELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYTEWKTFIEKHSN 116
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI WK L+D
Sbjct: 68 LKKLNSCEMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIRNWKRLLD 118
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 7 LKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 57
>gi|355745302|gb|EHH49927.1| hypothetical protein EGM_00669, partial [Macaca fascicularis]
Length = 237
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 35 IRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLIEALQ 93
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG VN +RKH ++ LAR + WK +++ N
Sbjct: 94 ELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYTEWKTFIEKHSN 145
>gi|149033908|gb|EDL88691.1| transcription elongation factor A (SII), 2 [Rattus norvegicus]
Length = 180
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D ++
Sbjct: 30 LRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRDQ 89
Query: 220 AEGTP 224
GTP
Sbjct: 90 GRGTP 94
>gi|413943256|gb|AFW75905.1| hypothetical protein ZEAMMB73_518971 [Zea mays]
Length = 760
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
D V+ ESL+ L + L D L +T++ + V L HGS +I+ LAR ++ GW+ V+
Sbjct: 65 DDVMIESLKTLLVAPLPHDLLASTDLARTVGALGNHGSSRIQSLARDVVRGWRVAVE 121
>gi|444706269|gb|ELW47612.1| Transcription elongation factor B polypeptide 3, partial [Tupaia
chinensis]
Length = 783
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L++L + +TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 2 LLKYLKKLSALPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 52
>gi|391333720|ref|XP_003741258.1| PREDICTED: uncharacterized protein LOC100897823 [Metaseiulus
occidentalis]
Length = 570
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
E +VL ++L +L M +TVD L+ T IGK VNG++ G K +A LI+ W+++VD
Sbjct: 18 EDRAVLKDTLYKLNKMEVTVDILQKTGIGKVVNGIKHRGGK-TGDMAADLIKKWRNVVD 75
>gi|345794043|ref|XP_535361.3| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor B
polypeptide 3 [Canis lupus familiaris]
Length = 751
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L + L++L + +TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 8 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 58
>gi|157279893|ref|NP_001098462.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Bos taurus]
gi|325530293|sp|A5PKE4.1|TEAN2_BOVIN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|148744002|gb|AAI42458.1| LOC539385 protein [Bos taurus]
Length = 208
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G I + T E + V+ ++ R K +L D+S L E+LR L+ + + LK+T+
Sbjct: 22 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVEALRELKKKIPSREVLKSTK 80
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
IG VN +R+H ++ LAR + W+ +++ VN
Sbjct: 81 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHVN 116
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ M ++++TL++T IG +VN +RK S ++++ LA++LI+ WK L+D
Sbjct: 30 LQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAKSLIKAWKKLLD 80
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 138 EVLRI-----KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK 192
EVLRI K + S E L + LR L +T++ L+ T IG AVN LRK +
Sbjct: 7 EVLRIGKQIDKIVTKGSESEDSLQLLKELRSLN-NTITLEVLQKTRIGMAVNNLRKQSDQ 65
Query: 193 -QIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVN 228
+I +LA+ LI+GWK L+ + +T + + + N
Sbjct: 66 EEIINLAKVLIKGWKKLLPQQGGSTPSTNKSKEKTSN 102
>gi|296489088|tpg|DAA31201.1| TPA: hypothetical protein LOC539385 [Bos taurus]
Length = 208
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G I + T E + V+ ++ R K +L D+S L E+LR L+ + + LK+T+
Sbjct: 22 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVEALRELKKKIPSREVLKSTK 80
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
IG VN +R+H ++ LAR + W+ +++ VN
Sbjct: 81 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHVN 116
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 4 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 63
Query: 220 AEGTP 224
G P
Sbjct: 64 GRGMP 68
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ M +T+D L++T IG +VN LRK + +++ LA++LI+ WK L+D
Sbjct: 30 LKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLD 80
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D T+
Sbjct: 30 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIGLAKSLIKSWKKLLDVSNAKTRDP 89
Query: 220 AEGTP 224
TP
Sbjct: 90 GRDTP 94
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 90
Query: 220 AEGTP 224
G P
Sbjct: 91 GRGMP 95
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG-SKQI 194
E+LRI + L SR ++ L + L++L +++ L+ T IG AVNG+RKH K++
Sbjct: 6 ELLRIAKKLDKMVSRKNTEGAL-DLLKKLSDYKMSIQLLQTTRIGIAVNGVRKHCLDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VALAKILIKNWKRLLD 80
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
+S ++LR+L+ +T L +T++GK + L KH K+I+ A LIE WK++V +
Sbjct: 30 ESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEIVIKET 89
Query: 214 NATK----AIAEGTPDSVNPSV 231
N K A ++ +P +PS
Sbjct: 90 NKNKKNGNASSKDSPKIGSPSA 111
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ-IRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S + + LA++LI+ WK L+D +
Sbjct: 39 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEGVIALAKSLIKSWKKLLDASDAKAREQ 98
Query: 220 AEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSA 254
G P + S E PS EL PSA
Sbjct: 99 RRGGPLPASSSKESPEAQDPSRKRPELPRM--PSA 131
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T+IG AVNG+RKH S K++ +A+ LI+ WK L+D
Sbjct: 30 LKKLGSYQMSIRLLQTTKIGVAVNGVRKHCSDKEVVAMAKVLIKNWKQLLD 80
>gi|165970440|gb|AAI58269.1| LOC100144956 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L ++L+RL + +TVD L T IGK VNGLRKH + LA+ L+ WK LV
Sbjct: 25 LQKTLKRLGDLPITVDILVETGIGKTVNGLRKHEF--VGDLAKNLVAQWKKLV 75
>gi|53792838|dbj|BAD53871.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125598342|gb|EAZ38122.1| hypothetical protein OsJ_22471 [Oryza sativa Japonica Group]
Length = 288
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEW 212
D ++ E+L L+L+ L +T++ + V LR H S+++R LA ++ GW+ V DE
Sbjct: 65 DGMMVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRSLAIGIVRGWRASVKDEL 124
Query: 213 VNATKAIAEGTPDSVNPSVVDEEEG---LPSPP 242
+ A A+ E ++ P D+ PSPP
Sbjct: 125 LKAAAAM-EKLSQAMEPDEADDHHAKILQPSPP 156
>gi|226531768|ref|NP_001145305.1| uncharacterized protein LOC100278611 [Zea mays]
gi|195654369|gb|ACG46652.1| hypothetical protein [Zea mays]
Length = 310
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
D V+ ESL+ L + + D L ++++ + V L HGS +IR LAR ++ GW+ V+
Sbjct: 65 DDVMVESLKTLLVAPVPYDLLASSDLARTVGALGSHGSFRIRSLARDVVRGWRVAVE--A 122
Query: 214 NATKAIA 220
+ T A+A
Sbjct: 123 SCTTAVA 129
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
LR L+ +TV+ LK T++G+ V LRKH S++I++ +R LI WK ++
Sbjct: 29 LRALESKPITVNILKETKLGQTVAKLRKHDSEKIQNQSRNLIHSWKSIL 77
>gi|326933172|ref|XP_003212682.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Meleagris gallopavo]
Length = 763
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L +SL+RL + +TVD L T +GK VN LRKH + + A+ L+ WK LV
Sbjct: 9 LLKSLKRLSELPITVDILVETGVGKTVNSLRKH--ELVGDFAKNLVARWKKLV 59
>gi|47087443|ref|NP_998620.1| transcription elongation factor B polypeptide 3 [Danio rerio]
gi|27881892|gb|AAH44429.1| Zgc:55573 [Danio rerio]
Length = 622
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L ++L+RL + +TVD L T IGK VN LRKH + A+ L+ WK LV E
Sbjct: 25 LLKTLKRLGELPMTVDILVETGIGKTVNSLRKH--EYAGEAAKNLVAKWKKLVPEKSADR 82
Query: 217 KAIAEG 222
++ +G
Sbjct: 83 PSVKDG 88
>gi|325303004|tpg|DAA34536.1| TPA_inf: transcription elongation factor B polypeptide [Amblyomma
variegatum]
Length = 240
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 150 RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
R +SD + E+LR+LQ + +T+ L+ T IG+ VN L+K+ I AR++I WK +V
Sbjct: 12 RTQSDEKVLETLRKLQKVPMTITLLQETGIGRTVNHLKKNDG-VIGETARSVIGAWKQVV 70
>gi|348670604|gb|EGZ10425.1| hypothetical protein PHYSODRAFT_518807 [Phytophthora sojae]
Length = 525
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
E+L KE L NS D +L L +L M +T++ LK T I +AV+ LR+HG+ ++
Sbjct: 437 EILSHKEKLENSETSHDELLV-CLNQLDQMVVTIEHLKETAIARAVSKLRQHGNDKVSAK 495
Query: 198 ARTLIEGW 205
A+ L + W
Sbjct: 496 AQELRQKW 503
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI WK L+D
Sbjct: 7 LKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLLD 57
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 235 LKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 285
>gi|125543480|gb|EAY89619.1| hypothetical protein OsI_11145 [Oryza sativa Indica Group]
Length = 534
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
D V+ ESL L+L+ +T TL T++ V LR+H S++IR LA ++ GW+
Sbjct: 66 DDVMAESLLTLRLVPVTARTLATTDLAGIVGALRRHESERIRGLATYIVRGWR 118
>gi|224015651|ref|XP_002297475.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967841|gb|EED86214.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1059
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 126 TDEIEEESQVVGEVLRIKEIL--HNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAV 183
T+ + + V+ +VL IKE L + DE+ F+ L L ++++ D L T+I AV
Sbjct: 271 TNSNKRKDTVLQDVLNIKENLMKQPTTDET----FDLLEDLDDISMSADILAKTQIAMAV 326
Query: 184 NGLRKHGSKQIRHLARTLIEGWKDLVDE 211
LR+H I LA+TL++ WK V++
Sbjct: 327 AQLRRHKETTISGLAKTLVQKWKKAVND 354
>gi|359488862|ref|XP_003633834.1| PREDICTED: uncharacterized protein LOC100252575 [Vitis vinifera]
Length = 1656
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L SLR L + + + L+ +GK+VN LR H + +I+ AR+L++ WK V+ +N
Sbjct: 353 LLASLRALDKLPVNLHALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKRRVEAEMN 410
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 90
Query: 220 AEGTP 224
G P
Sbjct: 91 GRGMP 95
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIR 195
E++RI + + + ++V + L+ L+ + +T++ L++T IG +VN +RK G + +
Sbjct: 7 EIIRIAKKMDRMVQKKNTVGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEDVT 66
Query: 196 HLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 67 SLAKALIKSWKKLLD 81
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|108707643|gb|ABF95438.1| expressed protein [Oryza sativa Japonica Group]
gi|125585921|gb|EAZ26585.1| hypothetical protein OsJ_10482 [Oryza sativa Japonica Group]
Length = 534
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
D V+ ESL L+L+ +T TL T++ V LR+H S++IR LA ++ GW+
Sbjct: 66 DDVMAESLLTLRLVPVTARTLATTDLAGIVGALRRHESERIRGLATDIVRGWR 118
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 67 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLD 117
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
S ++L++L+ +T DTL AT++GK + L KH + I+ +A L+E WK +V E
Sbjct: 32 SQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEETA 91
Query: 215 ATKAIAEGT 223
K EGT
Sbjct: 92 KAKK-TEGT 99
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
S ++L++L+ +T DTL AT++GK + L KH + I+ +A L+E WK +V E
Sbjct: 32 SQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEETA 91
Query: 215 ATKAIAEGT 223
K EGT
Sbjct: 92 KAKK-TEGT 99
>gi|335291450|ref|XP_003356504.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Sus scrofa]
Length = 208
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G I + T E + V+ ++ R K +L D++ L E LR L+ + + LK+T
Sbjct: 22 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQTKENLVEVLRELKKKIPSREVLKSTR 80
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDS 226
IG VN +R+H ++ LAR + W+ ++E V+ + P +
Sbjct: 81 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEEHVDRPSIVVRSDPKT 128
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNATKAI 219
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D +
Sbjct: 4 LRELKAMPITLHLLQSTRVGMSVNTLRKQSSDEEVIALAKSLIKSWKKLLDASDAKARER 63
Query: 220 AEGTP 224
G P
Sbjct: 64 GRGMP 68
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 138 EVLRIKEILHN--SRDESDS-VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-Q 193
+V+RIK+ L S++ +D+ V + L +L+ + + + L T+IG VN RK + +
Sbjct: 6 DVVRIKKKLEKMMSKETTDAAVALDMLNQLRKLPMNLQVLTKTKIGVTVNQFRKSVKEDE 65
Query: 194 IRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEE 235
+ +LA+++I+GWK + N +G+ S+NPS +E+
Sbjct: 66 VVNLAKSIIKGWKKFLSNDNN------KGSSSSLNPSAQEED 101
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
E+L+ + + ++ L +T++GK + L KH S +I A+ L+E WK +V + A
Sbjct: 36 EALKAMGAVEVSTSILLSTQVGKRLRKLTKHQSSKISGSAQQLLEKWKKVVADEA----A 91
Query: 219 IAEGTPDSVNPSVVDEEEGLPSP 241
I GT V+P++ E G P
Sbjct: 92 IKSGTSKEVSPTIKPETPGRTPP 114
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 31 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLD 81
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+L+I + L ++ ++ L + L+RL +++ L+ T IG AVNG+RK S K++
Sbjct: 6 ELLKITKKLEKMVAKKHTEGAL-DLLKRLNSCQMSIQLLQTTRIGVAVNGVRKQCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VALAKVLIKNWKQLLD 80
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ M +T++ L++T IG +VN +RK + ++I LA++LI+ WK L+D
Sbjct: 30 LKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEITSLAKSLIKSWKKLLD 80
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 31 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ LQ + ++++TL++T +G +VN +RK S ++++ LA++LI+ WK L+D
Sbjct: 30 LKELQNIKMSLETLQSTRVGMSVNAVRKQSSDEEVQTLAKSLIKSWKRLLD 80
>gi|62183957|gb|AAX73298.1| putative BAH domain-containing protein [Solanum lycopersicum]
Length = 1608
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 141 RIKEILHNSRDESDSV---LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
RI E+ NS+D S+ L LR L + + + L+ IGK+VN LR+H + +I+
Sbjct: 319 RIVEV-SNSKDGDISIEEFLLVLLRALDRLPVNLQALQMCNIGKSVNHLRQHKNMEIQRK 377
Query: 198 ARTLIEGWKDLVDEWVN 214
AR+L++ WK V+ +N
Sbjct: 378 ARSLVDTWKKRVEAEMN 394
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + ++ + L+ L+ M +T++ L++T IG +VN +RK + +++
Sbjct: 6 EIIRIAKKMDKMVQKKNAAGALDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEVT 65
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 66 SLAKSLIKSWKKLLD 80
>gi|193662067|ref|XP_001943463.1| PREDICTED: hypothetical protein LOC100158966 [Acyrthosiphon pisum]
Length = 336
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG-SKQIRHLARTLIEGWKDLVDEWV 213
S +FE + L+ + +T + L+AT IGK VN LR+ KQ+ A+ L++ W++L+ +
Sbjct: 26 STVFEVISTLEQLPVTTEVLEATRIGKMVNELRRKTLDKQLAKRAKELVQRWRNLM---I 82
Query: 214 NATKAIAEGTPDSVNPS 230
N+ + I + S P+
Sbjct: 83 NSAQVIQQAKLPSSQPN 99
>gi|397487966|ref|XP_003815047.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Pan paniscus]
Length = 208
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 6 IRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLVEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T IG VN +RKH ++ LAR + WK ++ N
Sbjct: 65 ELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSN 116
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 31 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLD 81
>gi|414885958|tpg|DAA61972.1| TPA: hypothetical protein ZEAMMB73_446855 [Zea mays]
Length = 264
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
D+V+ ESL L + +++ L + ++ + V L +H S +IR LAR ++ GW+ V+ +
Sbjct: 65 DAVMSESLVTLMQVPVSLGALASGDLIETVAALGQHESARIRSLARDVVRGWRSDVENEL 124
Query: 214 NATKAIAEGTPDSVNPSVVDEEE 236
+ KA E +S+ P ++ EEE
Sbjct: 125 DRAKAAMEAL-NSLPPLMLPEEE 146
>gi|291399284|ref|XP_002716070.1| PREDICTED: elongin A [Oryctolagus cuniculus]
Length = 739
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 153 SDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+++ L + L++L + +TVD L T +G+ VN LRKH + + AR L+ WK LV
Sbjct: 20 AEASLLKYLKKLSALPITVDILAETGVGRMVNSLRKH--EHVGGFARELVAQWKKLV 74
>gi|113205156|gb|AAX95757.2| BAH domain-containing protein, putative [Solanum lycopersicum]
Length = 1631
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 141 RIKEILHNSRDESDSV---LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
RI E+ NS+D S+ L LR L + + + L+ IGK+VN LR+H + +I+
Sbjct: 342 RIVEV-SNSKDGDISIEEFLLVLLRALDRLPVNLQALQMCNIGKSVNHLRQHKNMEIQRK 400
Query: 198 ARTLIEGWKDLVDEWVN 214
AR+L++ WK V+ +N
Sbjct: 401 ARSLVDTWKKRVEAEMN 417
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK G +++ LA++LI+ WK L+D
Sbjct: 32 LKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLLD 82
>gi|125556592|gb|EAZ02198.1| hypothetical protein OsI_24293 [Oryza sativa Indica Group]
Length = 206
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEW 212
D ++ E+L L+L+ L +T++ + V LR H S+++R LA ++ GW+ V DE
Sbjct: 65 DGMMVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRSLAIGIVRGWRASVKDEL 124
Query: 213 VNATKAIAEGTPDSVNPSVVDEEEG---LPSPP 242
+ A A+ E ++ P D+ PSPP
Sbjct: 125 LKAAAAM-EKLSQAMEPDEADDHHAKILQPSPP 156
>gi|147844703|emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera]
Length = 1961
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L SLR L + + + L+ +GK+VN LR H + +I+ AR+L++ WK V+ +N
Sbjct: 353 LLASLRALDKLPVNLHALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKRRVEAEMN 410
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 174 LKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 224
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEWV 213
S ++L++L+ +T DTL AT++GK + L KH ++I+ +A L+E WK +V E
Sbjct: 32 SQCLDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPIEEIKSVATDLLEIWKKVVIGETA 91
Query: 214 NATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
A K EGT V + PS P
Sbjct: 92 KAKK--TEGTNGCKEAKVNKMDVDKPSNP 118
>gi|297797271|ref|XP_002866520.1| hypothetical protein ARALYDRAFT_919569 [Arabidopsis lyrata subsp.
lyrata]
gi|297312355|gb|EFH42779.1| hypothetical protein ARALYDRAFT_919569 [Arabidopsis lyrata subsp.
lyrata]
Length = 1597
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
D L LR L + + ++ L+ IGK+VN LR H + +I AR+L++ WK V+ +
Sbjct: 358 DDFLLILLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVEAEM 417
Query: 214 NATKAIAEG 222
+A +G
Sbjct: 418 DAKSGSNQG 426
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
+++RI K++ ++ ++ + + L+ L+ + +T++ L++T IG +VN +RK + ++
Sbjct: 8 DIIRIAKKMDKMAQKKNGAGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDDEVT 67
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNP 229
LA+ LI+ WK L+DE + K E + P
Sbjct: 68 SLAKALIKSWKKLLDEPSSGDKPSDEKRKEPTTP 101
>gi|114556722|ref|XP_001150996.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 isoform 3 [Pan troglodytes]
gi|426329745|ref|XP_004025895.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Gorilla gorilla gorilla]
gi|410210050|gb|JAA02244.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410265674|gb|JAA20803.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410296030|gb|JAA26615.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410352709|gb|JAA42958.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
Length = 208
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 6 IRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLVEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T IG VN +RKH ++ LAR + WK ++ N
Sbjct: 65 ELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSN 116
>gi|440904860|gb|ELR55318.1| hypothetical protein M91_07816, partial [Bos grunniens mutus]
Length = 232
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G I + T E + V+ ++ R K +L D+S L ++LR L+ + + LK+T+
Sbjct: 46 GKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVKALRELKKKIPSREVLKSTK 104
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
IG VN +R+H ++ LAR + W+ +++ VN
Sbjct: 105 IGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHVN 140
>gi|440897840|gb|ELR49450.1| Transcription elongation factor B polypeptide 3, partial [Bos
grunniens mutus]
Length = 750
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L++L + +TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 4 LKKLSALPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 50
>gi|23308505|ref|NP_694580.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Homo sapiens]
gi|74752040|sp|Q96MN5.1|TEAN2_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|16552144|dbj|BAB71250.1| unnamed protein product [Homo sapiens]
gi|23271582|gb|AAH35374.1| Chromosome 1 open reading frame 83 [Homo sapiens]
gi|119627108|gb|EAX06703.1| chromosome 1 open reading frame 83 [Homo sapiens]
gi|167773393|gb|ABZ92131.1| chromosome 1 open reading frame 83 [synthetic construct]
Length = 208
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 6 IRTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLVEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T IG VN +RKH ++ LAR + WK ++ N
Sbjct: 65 ELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSN 116
>gi|29791737|gb|AAH50623.1| TCEA2 protein [Homo sapiens]
gi|119595575|gb|EAW75169.1| transcription elongation factor A (SII), 2, isoform CRA_b [Homo
sapiens]
Length = 242
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 31 LRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|449517160|ref|XP_004165614.1| PREDICTED: uncharacterized LOC101206878 [Cucumis sativus]
Length = 1629
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L LR L + + ++ L+ +GK+VN LR H + +I+ AR+L++ WK V+ ++
Sbjct: 386 LLALLRALDKLPVNLNALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKKRVEAEMDVN 445
Query: 217 KAIAEGT 223
A +E +
Sbjct: 446 DAKSESS 452
>gi|449459488|ref|XP_004147478.1| PREDICTED: uncharacterized protein LOC101206878 [Cucumis sativus]
Length = 1629
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L LR L + + ++ L+ +GK+VN LR H + +I+ AR+L++ WK V+ ++
Sbjct: 386 LLALLRALDKLPVNLNALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKKRVEAEMDVN 445
Query: 217 KAIAEGT 223
A +E +
Sbjct: 446 DAKSESS 452
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV RI K++ +S + LR L+ MA+T++ L++T +G +VN LRK + +I
Sbjct: 7 EVARIVKKLDKMVAKKSTGGALDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEII 66
Query: 196 HLARTLIEGWKDLVD 210
++++LI+ WK L+D
Sbjct: 67 TISKSLIKSWKKLLD 81
>gi|356518993|ref|XP_003528159.1| PREDICTED: uncharacterized protein LOC100788512 [Glycine max]
Length = 1613
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 149 SRDESDSV---LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
SRD SV L LR L + + + L+ IGK+VN LR H + +I+ AR L++ W
Sbjct: 351 SRDGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTW 410
Query: 206 KDLVDEWVNATKAIAEGTP 224
K V+ +N A + P
Sbjct: 411 KKRVEAEMNIKDAKSGSGP 429
>gi|222635466|gb|EEE65598.1| hypothetical protein OsJ_21131 [Oryza sativa Japonica Group]
Length = 225
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 177 TEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEW 212
TEIGKAV+ RKH SKQIRHL + LI+ +V W
Sbjct: 54 TEIGKAVSSYRKHNSKQIRHLVQLLIDALDGIVTLW 89
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M ++++ L++T +G +VN +RK S ++++++A++LI+ WK L+D
Sbjct: 30 LRELRNMKMSLEMLQSTRVGMSVNAVRKQSSDEEVQNIAKSLIKSWKKLLD 80
>gi|356507216|ref|XP_003522365.1| PREDICTED: uncharacterized protein LOC100780436 [Glycine max]
Length = 1701
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 149 SRDESDSV---LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW 205
SRD SV L LR L + + + L+ IGK+VN LR H + +I+ AR L++ W
Sbjct: 435 SRDGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTW 494
Query: 206 KDLVDEWVNATKAIAEGTP 224
K V+ +N A + P
Sbjct: 495 KKRVEAEMNIKDAKSGSGP 513
>gi|326672761|ref|XP_002664127.2| PREDICTED: transcription elongation factor B polypeptide 3-like
[Danio rerio]
Length = 587
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 136 VGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIR 195
V +VL++K L D L + L +L+++ +T++ L T IGK VN RKH +
Sbjct: 6 VKKVLQLKRQLKECND--GHTLLKILNKLEVLDITLEILAETGIGKVVNSFRKHD--EAG 61
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPD 225
+A+ L+ WK LV + + ++ EG P+
Sbjct: 62 KVAKVLVNRWKALVPK---GSISLTEGNPE 88
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV RI K++ +S + LR L+ MA+T++ L++T +G +VN LRK + +I
Sbjct: 7 EVARIVKKLDKMVAKKSTGGALDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEII 66
Query: 196 HLARTLIEGWKDLVD 210
++++LI+ WK L+D
Sbjct: 67 TISKSLIKSWKKLLD 81
>gi|159487166|ref|XP_001701606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271547|gb|EDO97364.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1074
Score = 45.1 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 150 RDESD-SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDL 208
RDE+ S L + L+++ + + LKA+ IG+ V LRKH +R A L++ WK +
Sbjct: 145 RDEAKLSALITVIGCLKMLPVDLQALKASSIGQTVGKLRKHTDGGVRKAAAELVDLWKGV 204
Query: 209 VDEWVNATKAIAEGTPDS 226
VD V +G S
Sbjct: 205 VDRSVGRAGETRQGGKSS 222
>gi|348542245|ref|XP_003458596.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oreochromis niloticus]
Length = 663
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
L ++L+RL + +TVD L T +GKAVN RKH + +A+ L+ WK LV +
Sbjct: 25 LLKTLKRLGELPMTVDILVETGVGKAVNSFRKH--ELAGEMAKNLVAKWKKLVPQ 77
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRK-HGSKQIRHLARTLIEGWKDLVDE 211
L+ L+ + +T+D L+ T IG +VN LRK S+++ LA++LI+ WK L+++
Sbjct: 8 LKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLLNQ 59
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRK-HGSKQIRHLARTLIEGWKDLVDE 211
L+ L+ + +T+D L+ T IG +VN LRK S+++ LA++LI+ WK L+++
Sbjct: 257 LKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLLNQ 308
>gi|449283630|gb|EMC90235.1| Transcription elongation factor B polypeptide 3, partial [Columba
livia]
Length = 596
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
+ E+L+ LQ + +++D L T IGK VN RKH + ++A+TL++ WK L+ T
Sbjct: 17 IVETLKVLQDLDISLDILVETGIGKTVNSFRKHAT--AGNVAKTLVKQWKKLISPENKRT 74
Query: 217 KA 218
K+
Sbjct: 75 KS 76
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN LRK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN LRK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHG-SKQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVNG+RKH K++ LA+ LI+ WK L+D
Sbjct: 34 LKKLNGYKMSIQLLQTTRIGIAVNGVRKHCLDKEVVALAKILIKNWKRLLD 84
>gi|321476553|gb|EFX87513.1| hypothetical protein DAPPUDRAFT_221473 [Daphnia pulex]
Length = 537
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 144 EILHNSRD----ESDS-VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
EILH R SDS VL L +L + + V+ L+AT IG+ +NG+RK + A
Sbjct: 7 EILHYQRKILKYGSDSKVLLHCLNKLTKLPIGVEHLQATGIGRTINGMRK-ADGAVGEEA 65
Query: 199 RTLIEGWKDLV 209
R+L+ WK++V
Sbjct: 66 RSLVNKWKEMV 76
>gi|53793292|dbj|BAD54514.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 345
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEW 212
D ++ E+L L+L+ L +T++ + V LR H S+++R LA ++ W+ V DE
Sbjct: 136 DEMMVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRGLATGIVRAWRASVKDEL 195
Query: 213 VNATKAIAEGTPDSVNPSVVDEEEG---LPSPP 242
+ A A+ E ++ P D+ PSPP
Sbjct: 196 LKAAAAM-EKLSQALEPDEADDHHAKILQPSPP 227
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN LRK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|356573400|ref|XP_003554849.1| PREDICTED: uncharacterized protein LOC100796021, partial [Glycine
max]
Length = 1564
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
D L LR L + + + L+ +GK+VN LR H + +I+ AR+L++ WK V+ +
Sbjct: 350 DEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNYEIQRKARSLVDTWKRRVEAEM 409
Query: 214 N 214
N
Sbjct: 410 N 410
>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1276
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 139 VLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
+L+I+E L + D S+ L E L++L+ + +T+ L+ + IG+ VN +++ + + LA
Sbjct: 978 ILKIQEKLEDP-DLSEEALVELLQKLEYVDITLKDLQGSNIGRLVNLVQRRRTGNAKRLA 1036
Query: 199 RTLIEGWKDLVDEWVNATKAIAEGTPDSVNP 229
+ LI+ WK+ V+ K + + P + P
Sbjct: 1037 QQLIKKWKETVE------KTLTDKQPSDLKP 1061
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN LRK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 125 LTDEIEEESQVVGEVLRIKEILHNSR----DESDSVLFESLRRLQLM----------ALT 170
LT E + +Q E++ I +L R ES + + + L+RL M L
Sbjct: 1312 LTPEAYKSTQ--SELITITSVLDELRADKSSESQAKIVKLLKRLDKMDVMLTDLRVRLLI 1369
Query: 171 VDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
+ L++T IGKAVN LRKH K I+ L+ L + W L+D+
Sbjct: 1370 LAFLRSTSIGKAVNKLRKHDDKDIKALSAKLKDKWTSLMDK 1410
>gi|242094044|ref|XP_002437512.1| hypothetical protein SORBIDRAFT_10g028410 [Sorghum bicolor]
gi|241915735|gb|EER88879.1| hypothetical protein SORBIDRAFT_10g028410 [Sorghum bicolor]
Length = 264
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
D + E+L L++ + L +T++ +AV L KHGS +IR LA ++ GW +D
Sbjct: 65 DDAMVEALETLRVAPVPHKALASTDLARAVRALEKHGSARIRTLAGDVVRGWTTAID 121
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLV 209
L++L ++V L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+
Sbjct: 37 LKKLSSCRMSVQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 86
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN LRK + +++ LA++LI+ WK L+D
Sbjct: 39 LKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLD 89
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI L +R ++ L + L++L +++ L+ T IG AVNG+RK S K++
Sbjct: 6 ELLRIARKLEKMVARRNTEGAL-DLLKKLNSCPMSIQLLQTTRIGVAVNGVRKRCSDKEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 VALAKVLIKNWKRLLD 80
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+D
Sbjct: 323 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 373
>gi|296208027|ref|XP_002750904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Callithrix jacchus]
Length = 208
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 103 CRDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLR 162
R + N S G + + E + VV ++ R K +L ++ L E+L+
Sbjct: 6 IRTPRIQNSPQKKDSGGKVYKQAAIESLKRVVVVEDIKRWKTMLELP-GQTKENLVEALQ 64
Query: 163 RLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T+IG VN LRKH ++ +LAR + WK +++ N
Sbjct: 65 ELKKKIPSREVLKSTKIGHTVNKLRKHSDSEVAYLAREVYTEWKTFIEKHSN 116
>gi|357117449|ref|XP_003560480.1| PREDICTED: uncharacterized protein LOC100836405 [Brachypodium
distachyon]
Length = 268
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGW-----KDL 208
D + ESL L+L+ L T+I KAV L+KH S+++R LAR ++ W DL
Sbjct: 65 DDAMAESLETLRLVPAMPTVLAKTDIAKAVRALQKHESERVRVLARGIVSRWGATFQDDL 124
Query: 209 V---------DEWVNATKAIAEGTPDS---VNPSVVDEEEGLPSPPLDELAFFTGPSAGI 256
V D+ + +A+ P S + PS + + PP P+ G+
Sbjct: 125 VRFRAATEKLDQIPMPDQIVADQQPVSAKILQPSAKNTRKITEMPPPQPKKVSPAPAVGV 184
>gi|194207427|ref|XP_001492860.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Equus caballus]
gi|335772927|gb|AEH58220.1| hypothetical protein [Equus caballus]
Length = 208
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 104 RDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRR 163
R + N G I + T E + V+ ++ R K +L D+S L E+LR
Sbjct: 7 RTPRIQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQSKENLVEALRE 65
Query: 164 LQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T IG VN +R+H ++ LAR + W+ +++ ++
Sbjct: 66 LKKKIPSREVLKSTRIGHTVNKMRRHSDSEVACLAREVYTEWRTFIEKHLD 116
>gi|260792918|ref|XP_002591461.1| hypothetical protein BRAFLDRAFT_119264 [Branchiostoma floridae]
gi|229276666|gb|EEN47472.1| hypothetical protein BRAFLDRAFT_119264 [Branchiostoma floridae]
Length = 210
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 117 SSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKA 176
S G + + T E + V+ ++ R+K L +S VL E+L L + L +
Sbjct: 20 SQGKVYKQATIESLQRVVVIEDIERLKVTL-ELEGQSTRVLLEALTELNKKIPSKQVLLS 78
Query: 177 TEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
T+IG AVN L++H K++ LAR+++ WK + + N
Sbjct: 79 TKIGHAVNKLKRHEDKEVASLARSIVLKWKHFIQDQDN 116
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
++L++L+ +T L +T++GK + L KH +K+I+ LA LI+ WK++V E
Sbjct: 33 LDALKQLKDFPVTYQVLVSTQVGKRLRTLTKHPTKKIQALASDLIDIWKNIVIE 86
>gi|125556571|gb|EAZ02177.1| hypothetical protein OsI_24269 [Oryza sativa Indica Group]
gi|125598321|gb|EAZ38101.1| hypothetical protein OsJ_22452 [Oryza sativa Japonica Group]
Length = 274
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEW 212
D ++ E+L L+L+ L +T++ + V LR H S+++R LA ++ W+ V DE
Sbjct: 65 DEMMVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRGLATGIVRAWRASVKDEL 124
Query: 213 VNATKAIAEGTPDSVNPSVVDEEEG---LPSPP 242
+ A A+ E ++ P D+ PSPP
Sbjct: 125 LKAAAAM-EKLSQALEPDEADDHHAKILQPSPP 156
>gi|357117471|ref|XP_003560491.1| PREDICTED: uncharacterized protein LOC100840373 [Brachypodium
distachyon]
Length = 274
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 114 SNFSSGDIA-EALTDEI--EEESQVVGEVLRIKEILHNSRDES----------DSVLFES 160
+ F+S D A EA ++ +E ++ G++L E+L N+ D++ D V+ ES
Sbjct: 15 AAFASIDAAIEAADPDLCRDEFRRIRGDIL---ELLCNATDDAREAERLCLVLDEVMAES 71
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEWVNATKAI 219
L L+L+ L T++ KAV L KH S+++R LA ++ W+ V DE V A+
Sbjct: 72 LETLRLVPAMPTVLATTDLAKAVGALLKHDSERVRVLASGIMSRWRASVQDELVTVQAAM 131
Query: 220 A--EGTPDSVNPSVVDEEEGLPS 240
+ P N V ++ +P+
Sbjct: 132 ENLDQIPLPSNKKTVAGQQHVPA 154
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNAT 216
E L+ LQ MA+ +D L T IG VN LRK +++ L +TLI+ WK + +
Sbjct: 29 LELLKALQTMAINLDVLTKTRIGMTVNALRKSSKDEEVISLCKTLIKNWKKFLSTPTTPS 88
Query: 217 K 217
K
Sbjct: 89 K 89
>gi|222630841|gb|EEE62973.1| hypothetical protein OsJ_17780 [Oryza sativa Japonica Group]
Length = 302
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
D V+ ESL L+L+ +T TL T++ V LRKH S++IR LA ++ W+ V
Sbjct: 67 DEVMAESLLTLRLVPVTPRTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAV 122
>gi|255540753|ref|XP_002511441.1| DNA binding protein, putative [Ricinus communis]
gi|223550556|gb|EEF52043.1| DNA binding protein, putative [Ricinus communis]
Length = 1712
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
LF LR L + + + L+ IGK+VN LR H + +I+ AR+L++ WK V+ ++A
Sbjct: 448 LFVLLRALDKLPVNLHALQMCNIGKSVNHLRTHKNLEIQKKARSLVDTWKKRVEAEMDA 506
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
LR L+ M +T++ L++T +G +VN LRK + +I L+++LI+ WK L+D
Sbjct: 31 LRELKNMPITLELLQSTHVGMSVNALRKQSNDNEIITLSKSLIKSWKKLLD 81
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI K++ + ++ + + L+ L+ + +T++ L++T IG +VN +RK S +
Sbjct: 8 EIIRIAKKMERMVQKKNTAGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSSDDDVA 67
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 68 SLAKSLIKSWKKLLD 82
>gi|281207317|gb|EFA81500.1| RNA polymerase II elongation factor [Polysphondylium pallidum
PN500]
Length = 275
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 137 GEVLRIKEILHNS-RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIR 195
GE++ +K+ L N+ +D+ + L+ + L+ ++ D L+ T IGK+V LRK+ ++ I
Sbjct: 3 GEIVELKQQLDNAVKDDDLDTVLALLKAISLLDISKDLLQKTAIGKSVGLLRKNKNEAIS 62
Query: 196 HLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDE 234
A L++ WK+ + ATK TP S P + E
Sbjct: 63 KNALELVDKWKEQL-----ATKT----TPASSTPPIKKE 92
>gi|218196410|gb|EEC78837.1| hypothetical protein OsI_19144 [Oryza sativa Indica Group]
Length = 315
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
D V+ ESL L+L+ +T TL T++ V LRKH S++IR LA ++ W+ V
Sbjct: 67 DEVMAESLLTLRLVPVTPRTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAV 122
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSV 227
L+ T++G VN R H +K I L + +I GW++ V N+ K + G+P+S
Sbjct: 40 LRETKVGVVVNKYRSHDNKDISTLVKKMIRGWREAVQNEKNSKKKPSAGSPEST 93
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 151 DESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
D +D V E LR L+ +T LK T++G V LRKH +++I LAR L++ WK++
Sbjct: 18 DVTDQVEALEVLRGLEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMA 77
>gi|55168107|gb|AAV43975.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 314
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
D V+ ESL L+L+ +T TL T++ V LRKH S++IR LA ++ W+ V
Sbjct: 67 DEVMAESLLTLRLVPVTPRTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAV 122
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|55154476|gb|AAH85215.1| LOC495514 protein, partial [Xenopus laevis]
Length = 348
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L ++L+RL + +TVD L T IGK VN LRKH + LA+ L+ WK LV + T
Sbjct: 24 LQKTLKRLVDLPITVDILVETGIGKTVNSLRKHEF--VGDLAKNLVAQWKKLVPQ---ET 78
Query: 217 KAIAEGTPDSVNPSVVDEEEGLPSPPLD 244
E N + V + PSP D
Sbjct: 79 PRATEPEEREHNKNSVKKRPRSPSPRYD 106
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 6 EIIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 65
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 66 SLAKSLIKSWKKLLD 80
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|348680729|gb|EGZ20545.1| hypothetical protein PHYSODRAFT_493974 [Phytophthora sojae]
Length = 480
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 148 NSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
N + S ++ L L M LTVD LK+T +G+ +N LRKH + + A L+ WK
Sbjct: 418 NVTNVSAALATHVLNTLADMVLTVDILKSTGVGRTINKLRKHATPAVAKAATQLVAKWK 476
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Query: 137 GEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRH 196
G+++ I +IL N D ++ +L ES + G AV LR H SK+I
Sbjct: 25 GDIISILKILKNEFDVTEQILRES-----------------KAGLAVGKLRSHDSKEIST 67
Query: 197 LARTLIEGWKDLVDEWVNATKAIAEGTPDSVNP 229
LA+ ++ WK VD+ A TP + P
Sbjct: 68 LAKEIVRKWKTAVDKQKGGKTTSAASTPTNAAP 100
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLV 209
LR L+ M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+
Sbjct: 7 LRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 56
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E+LRI + L +R +++ L + L++L +++ L+ T IG AVNG+RKH S +
Sbjct: 6 ELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGIAVNGVRKHCSDTEA 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L++
Sbjct: 65 VSLAKVLIKKWKRLLE 80
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L+ T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 30 LKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 80
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 30 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 80
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQI 194
E++RI + L SR+ +D + + LR L+ +T+ L+ T IG +VN +RKH +++
Sbjct: 6 ELVRIAKKLDKMVSRNTTDGAM-DLLRELKSFNMTLKLLQETRIGVSVNSIRKHCADEEV 64
Query: 195 RHLARTLIEGWKDLVD 210
LA+ LI+ WK L+D
Sbjct: 65 IALAKVLIKDWKRLLD 80
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|119607147|gb|EAW86741.1| transcription elongation factor A (SII), 1, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 14 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 64
>gi|32492337|emb|CAE05477.1| OSJNBa0006A01.23 [Oryza sativa Japonica Group]
gi|39545853|emb|CAE03931.3| OSJNba0093F12.5 [Oryza sativa Japonica Group]
Length = 495
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
+VG L+I+++ DE L L+ L M +T L+ T+IG+ VNGLRKH S ++
Sbjct: 375 IVG--LKIRDLYEQPEDE----LLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEV 428
Query: 195 RHLA 198
R LA
Sbjct: 429 RLLA 432
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|194374147|dbj|BAG62386.1| unnamed protein product [Homo sapiens]
Length = 123
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
+++ L+ T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 1 MSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 43
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ-IRHLARTLIEGWKDLVD 210
L+ L+ M +T+ L++T IG +VN LRK + + + LA++LI+ WK L+D
Sbjct: 30 LKELKSMPITLHLLQSTRIGMSVNALRKQSTDEDVIALAKSLIKAWKKLLD 80
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + ++ + L+ L+ + +T++ L+ T IG +VN +RK + +++
Sbjct: 6 EIIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVT 65
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 66 SLAKSLIKSWKKLLD 80
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 73 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 123
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L++L +++ L+ T IG AVN +RKH S K++ LA+ LI+ WK L+D
Sbjct: 39 LKKLNSCQMSIQLLQTTRIGVAVNRVRKHCSDKEVVSLAKVLIKNWKRLLD 89
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EIIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EIIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|301102939|ref|XP_002900556.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101819|gb|EEY59871.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 507
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
E+L +K + N+ D +L L +L M LT+D LK T I +AV+ LR+HG+ ++
Sbjct: 427 EILELKLKVENADTSHDEMLV-CLNQLGEMPLTIDHLKKTGIARAVSKLRQHGNDKVSAK 485
Query: 198 ARTLIEGWKDLVDE 211
A L + W ++E
Sbjct: 486 AHELRQKWIKQINE 499
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 18 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 77
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 78 SLAKSLIKSWKKLLD 92
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 17 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 67
>gi|297664858|ref|XP_002810837.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2, partial [Pongo abelii]
Length = 174
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++ R K +L D++ L E+L+ L+ + + LK+T IG VN +RKH ++
Sbjct: 4 VVEDIKRWKTMLELP-DQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEV 62
Query: 195 RHLARTLIEGWKDLVDEWVN 214
LAR + WK +++ N
Sbjct: 63 ASLAREIYTEWKTFIEKHSN 82
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EIIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 125 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 175
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 14 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 64
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|334328309|ref|XP_001363263.2| PREDICTED: transcription elongation factor B polypeptide 3
[Monodelphis domestica]
Length = 842
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +TVD L T +GK VNGLRKH +Q+ A+ L+ WK LV
Sbjct: 104 LPITVDILAETGVGKTVNGLRKH--EQVGGFAKDLVARWKKLV 144
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 28 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|291221136|ref|XP_002730579.1| PREDICTED: chromosome 1 open reading frame 83-like [Saccoglossus
kowalevskii]
Length = 210
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++LR+K +L ++++ L ++L+ L+ + + L +T+IG +N +RKH SK++
Sbjct: 40 VVEDILRMKAVL-ELENQTEENLLKALQELRQKTPSREILSSTKIGHTLNTIRKHSSKEV 98
Query: 195 RHLARTLIEGWKDLVDEWVNATKAIAEGTPDS 226
LA+ + WK + + + K I E D+
Sbjct: 99 AALAKDIRNDWKKFIKD--RSDKGIIEVRSDA 128
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
E LR L+ +T LK T++G V LRKH +++I LAR L++ WK++
Sbjct: 26 LEVLRALEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMA 77
>gi|302844660|ref|XP_002953870.1| hypothetical protein VOLCADRAFT_118487 [Volvox carteri f.
nagariensis]
gi|300260978|gb|EFJ45194.1| hypothetical protein VOLCADRAFT_118487 [Volvox carteri f.
nagariensis]
Length = 1329
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 150 RDES-DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDL 208
RDE L + + L+++ + + LK + IG+ V LRKH ++ +R A L++ WK +
Sbjct: 382 RDEGRHPALVKVISCLKMLPIDLIALKGSSIGQTVGKLRKHTNQAVRAAAAELVDQWKSV 441
Query: 209 VDEWVNATKA 218
VD V +A
Sbjct: 442 VDRSVGKGEA 451
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 7 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 57
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 7 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 57
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 17 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 67
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 7 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 57
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 50 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 100
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLV 209
E L+ LQ MA+ +D L T IG VN LRK ++ L +TLI+ WK +
Sbjct: 29 LELLKALQTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 81
>gi|325180148|emb|CCA14550.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 508
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L +L ++ + +D LK T IGK VN L+KH IR + TL + WK+ V
Sbjct: 37 LNKLTMLKVDMDLLKRTNIGKMVNRLKKHQDSVIRGYSSTLTKKWKEQV 85
>gi|431896917|gb|ELK06181.1| hypothetical protein PAL_GLEAN10023779 [Pteropus alecto]
Length = 208
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 104 RDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRR 163
R + N G I + T E + V+ ++ R K L D++ L E+LR
Sbjct: 7 RTPRIQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTTLELP-DQTKENLVEALRE 65
Query: 164 LQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T IG VN +R+H ++ LAR + W+ +++ N
Sbjct: 66 LKKKIPSKEVLKSTRIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHSN 116
>gi|359491606|ref|XP_003634295.1| PREDICTED: uncharacterized protein LOC100248456 [Vitis vinifera]
Length = 1631
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
LR L + + + L+ IGK+VN LR H + +I+ AR+L++ WK V+ +N A
Sbjct: 360 LRALDKLPVNLQALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMNINDA 417
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 45 LKELKNILMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 95
>gi|432883684|ref|XP_004074328.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oryzias latipes]
Length = 658
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIR-HLARTLIEGWKDLVDEWVNA 215
L ++L+RL + +TV L T +GK VN RKH Q+ LA++L+ WK LV + +
Sbjct: 25 LLKALKRLGELPMTVHILVETGVGKTVNSFRKH---QVAGELAKSLVAKWKKLVPQSADR 81
Query: 216 TKAIAEGTPDSVNPSVVDEEEGLPSP 241
+ + P S + + E PSP
Sbjct: 82 PNSHGKEAPCSQAQGLRHQRE--PSP 105
>gi|395536767|ref|XP_003770383.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Sarcophilus harrisii]
Length = 208
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
L E+LR L+ + D LK+T+IG VN +RKH ++ LA + WK +++
Sbjct: 59 LMEALRELKKKLPSKDVLKSTKIGHTVNKMRKHSDGEVARLAHEVYTEWKTFIEK 113
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 93 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 143
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 76 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 126
>gi|147817646|emb|CAN60153.1| hypothetical protein VITISV_021504 [Vitis vinifera]
Length = 1688
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
LR L + + + L+ IGK+VN LR H + +I+ AR+L++ WK V+ +N A
Sbjct: 404 LRALDKLPVNLQALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMNINDA 461
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN LRK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L++
Sbjct: 64 SLAKSLIKSWKKLLN 78
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 136 VGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-QI 194
+G+ L K IL+NS D + + L +L+ M +T+ L+ T IG VN RK SK ++
Sbjct: 3 IGKKLE-KMILNNSADHGGAD--DLLNKLKDMPMTLTVLQKTRIGMTVNNFRKAASKDEL 59
Query: 195 RHLARTLIEGWKDLV 209
L++TLI+ WK L+
Sbjct: 60 VVLSKTLIKSWKKLL 74
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 113 LKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 163
>gi|325192517|emb|CCA26950.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 553
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
S+ L++L M L V+ LK+T +G+ ++ L+KH ++ LA+ LI+ WK
Sbjct: 498 SLAIHVLKKLSGMTLNVEVLKSTGVGRIISKLKKHKDGEVSRLAQILIKKWK 549
>gi|255540759|ref|XP_002511444.1| conserved hypothetical protein [Ricinus communis]
gi|223550559|gb|EEF52046.1| conserved hypothetical protein [Ricinus communis]
Length = 1651
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
LR L + + + L+ IGK+VN LR H +I+ ARTL++ WK V+ ++A
Sbjct: 372 LRALDKLPVNLHALQMCNIGKSVNHLRTHKHLEIQKKARTLVDTWKKRVEAEMDA 426
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 138 EVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
EV+RI + + + ++ + L+ L+ + +T++ L++T IG +VN +RK + +++
Sbjct: 4 EVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|449526349|ref|XP_004170176.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101224819 [Cucumis sativus]
Length = 1599
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
LR L + + + L+ IGK+VN LR H + +I+ AR+L++ WK V+ +N A
Sbjct: 362 LRALDKLPVNLPALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMNINDA 419
>gi|186510768|ref|NP_190388.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|186510770|ref|NP_850669.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|332644839|gb|AEE78360.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|332644840|gb|AEE78361.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
Length = 1613
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 162 RRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAE 221
R L + + ++ L+ IGK+VN LR H + +I AR+L++ WK V+ ++A +
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVEAEMDAKSGSNQ 421
Query: 222 G 222
G
Sbjct: 422 G 422
>gi|4678323|emb|CAB41134.1| putative protein [Arabidopsis thaliana]
Length = 1613
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 162 RRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAE 221
R L + + ++ L+ IGK+VN LR H + +I AR+L++ WK V+ ++A +
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVEAEMDAKSGSNQ 421
Query: 222 G 222
G
Sbjct: 422 G 422
>gi|15228325|ref|NP_190389.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|4678322|emb|CAB41133.1| putative protein [Arabidopsis thaliana]
gi|332644841|gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
Length = 1611
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 162 RRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAE 221
R L + + ++ L+ IGK+VN LR H + +I AR+L++ WK V+ ++A +
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVEAEMDAKSGSNQ 421
Query: 222 G 222
G
Sbjct: 422 G 422
>gi|449441029|ref|XP_004138286.1| PREDICTED: uncharacterized protein LOC101210258 [Cucumis sativus]
Length = 1606
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
LR L + + + L+ IGK+VN LR H + +I+ AR+L++ WK V+ +N A
Sbjct: 369 LRALDKLPVNLPALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMNINDA 426
>gi|357143934|ref|XP_003573106.1| PREDICTED: uncharacterized protein LOC100824814 [Brachypodium
distachyon]
Length = 1687
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
+++ L++ IGK+VN LR H + +I+ A+ L+E WK VD + +T A
Sbjct: 452 ISLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSTDA 501
>gi|297819422|ref|XP_002877594.1| hypothetical protein ARALYDRAFT_485166 [Arabidopsis lyrata subsp.
lyrata]
gi|297323432|gb|EFH53853.1| hypothetical protein ARALYDRAFT_485166 [Arabidopsis lyrata subsp.
lyrata]
Length = 1613
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 162 RRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAE 221
R L + + ++ L+ IGK+VN LR H + +I AR+L++ WK V+ ++A +
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVEAEMDAKSGSNQ 421
Query: 222 G 222
G
Sbjct: 422 G 422
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHG-SKQIRHLARTLIEGWKDLVD 210
L+RL +T+ L+ T IG AVN +RKH +++ LA+ LI+ WK L++
Sbjct: 25 LKRLNSCTMTIQLLQTTRIGIAVNTIRKHSRDEEVIALAKVLIKNWKRLLE 75
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 161 LRRL-QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAI 219
L++L Q + T + L+ T+ G A+ LR H K+I LA+ L++ WK+ V+ K
Sbjct: 29 LKQLKQSVVATEELLRETKAGLAIGKLRSHPRKEIADLAKELVKKWKEAVEA---GKKVK 85
Query: 220 AEG----TPDSVNPSVVDEEEGLPSPPLDELAFFTGP 252
A G TP + PS G P+PP + T P
Sbjct: 86 AAGGTPSTPSTATPS------GKPTPPPAATSQPTKP 116
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 143 KEILHNSRD----ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
KEI+ +D ESDS + L LQ + T L+ T++G VN LR H + ++ L
Sbjct: 48 KEIVTVMKDLEKAESDSQIIRLLTLLQTDVVPTEKVLRETKVGVTVNRLRSHANPEVGTL 107
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
+ +I+ WKD V + + G+P S E + P
Sbjct: 108 VKKIIKTWKDGVSQEKKKKAVSSAGSPAKSTTSTTTNERFVSKGP 152
>gi|297733825|emb|CBI15072.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
LR L + + + L+ IGK+VN LR H + +I+ AR+L++ WK V+ +N A
Sbjct: 360 LRALDKLPVNLQALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMNINDA 417
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVD 210
L+ L+L +T++ L++T IG +VN +RK G +++ LA++LI+ WK L+D
Sbjct: 20 LKELKL-PMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLLD 69
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 143 KEILHNSRD----ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHL 197
KEI+ +D ESDS + L LQ + T L+ T++G VN LR H + ++ L
Sbjct: 4 KEIVTVMKDLEKAESDSQIIRLLTLLQTDVVPTEKVLRETKVGVTVNRLRSHANPEVGTL 63
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPP 242
+ +I+ WKD V + + G+P S E + P
Sbjct: 64 VKKIIKTWKDGVSQEKKKKAVSSAGSPAKSTTSTTTNERFVSKGP 108
>gi|354485612|ref|XP_003504977.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Cricetulus griseus]
Length = 836
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 166 LMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
++ +TVD L T +GK VN RKH +Q+ + AR L+ WK LV
Sbjct: 96 ILPITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLV 137
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 142 IKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTL 201
+K+++ +S+ S L++L+ +T D LK T+ G AV LR H + Q+ A+ +
Sbjct: 12 VKDVVESSKGPKHSDTVGLLQKLRGHGVTEDLLKETKAGLAVGKLRSHANAQVAETAKEV 71
Query: 202 IEGWKDLVDEWVNATKAIA---EGTPDSVNPSVV 232
+ WK V+ + KA + G VNP +
Sbjct: 72 VRRWKAEVEGQKSEKKAGSSSPSGGAKKVNPKPI 105
>gi|393909808|gb|EFO22896.2| hypothetical protein LOAG_05591 [Loa loa]
Length = 502
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH---GSKQIRHLARTLIEGWKDLV 209
D+ + +LRRL + +T++ L T +GKAVN LR H G+K +R ++E WKD+
Sbjct: 85 DNKIGHALRRLANINMTLELLSETGVGKAVNQLRSHEQYGTKALR-----IVEKWKDMA 138
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+SL++L+ +T + L +T++GK + L KH ++IR +A L+E WK +V
Sbjct: 36 DSLKQLRKFKVTSELLVSTQVGKKLRPLAKHPKEKIRAVASDLLEMWKKMV 86
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
+ + L++LQ +T D LK T GK +N KH S + A+ +E WK V +
Sbjct: 34 MLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKHASDAVSKSAKAAVEAWKQCVKKETADG 93
Query: 217 KAIAEG 222
AEG
Sbjct: 94 GDTAEG 99
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 149 SRDESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
S +E S + L++LQ + T D L++T +G AVN L++H S ++ LA ++ W+
Sbjct: 20 SSNEPPSTIIPLLKQLQQGVKATEDLLRSTRVGIAVNKLKQHKSPEVARLASEIVSKWRH 79
Query: 208 LVD-EWVNATKAIAEGTPDSVNPSVVDEEEGLPSP 241
V+ + A+ ++ + S +P G +P
Sbjct: 80 EVNKQKAGASPGASQRSSSSPHPKTNGTPSGGATP 114
>gi|332247941|ref|XP_003273122.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Nomascus leucogenys]
Length = 208
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 104 RDDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRR 163
R + N S G + + T E + VV ++ R K +L D++ L E+L+
Sbjct: 7 RTPRIQNSPQKKDSGGKVYKQATIESLKRVVVVEDIKRWKTMLELP-DQTKENLVEALQE 65
Query: 164 LQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L+ + + LK+T IG VN + KH ++ LAR + WK ++ N
Sbjct: 66 LKKKIPSREVLKSTRIGHTVNKMCKHSDSEVASLAREVYTEWKTFIERHSN 116
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 142 IKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTL 201
+K + S DE + +L+ Q +T L+ ++ G AV LR+H SK++ LA+ +
Sbjct: 10 VKSLSSASTDEDIVGILNTLK--QQPKITESLLRESKAGLAVGKLRQHASKRVADLAKEI 67
Query: 202 IEGWKDLVDEWVNAT----KAIAEGTPDSVNPSV-VDEEEGLPSPPLDELAFFTG 251
+ WK V+ A+ KA + G + SV PS P+ A +G
Sbjct: 68 VRKWKTEVEREKQASGGGAKAASNGKTSAAKKSVSAGSNAATPSTPVTPTASTSG 122
>gi|242060874|ref|XP_002451726.1| hypothetical protein SORBIDRAFT_04g006680 [Sorghum bicolor]
gi|241931557|gb|EES04702.1| hypothetical protein SORBIDRAFT_04g006680 [Sorghum bicolor]
Length = 217
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
D + E+L L+++ +T L T++ +AV GL H ++R LAR ++ GW+
Sbjct: 67 DVAMAEALETLRVVPVTPAMLTTTDVARAVGGLLGHECGRVRGLARAVVSGWR 119
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 149 SRDESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
S +E S + L++LQ + T D L++T +G AVN L++H S ++ LA ++ W+
Sbjct: 20 SSNEPPSTIIPLLKQLQQGVKATEDLLRSTRVGIAVNKLKQHKSPEVARLASEIVSKWRH 79
Query: 208 LVD-EWVNATKAIAEGTPDSVNPSVVDEEEGLPSP 241
V+ + A+ ++ + S +P G +P
Sbjct: 80 EVNKQKAGASPGASQRSSSSPHPKTNGTPSGGATP 114
>gi|301091356|ref|XP_002895865.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096533|gb|EEY54585.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 480
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 150 RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
++ S ++ L L M LTV+ LK+T +G+ +N LRKH + + A L+ WK+
Sbjct: 420 KNVSPALATHVLSTLADMVLTVEILKSTGVGRTINKLRKHTTASVAKAATQLVAKWKN 477
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 166 LMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPD 225
L A T D ++ ++IG AV +R H K++ A++L++ WK +VD+ + A + P
Sbjct: 41 LSAPTEDVIRQSKIGVAVGKMRSHSDKKVADQAKSLVKDWKAIVDKQRAQSSANSSKAPS 100
Query: 226 SV 227
S
Sbjct: 101 ST 102
>gi|226528268|ref|NP_001143422.1| uncharacterized protein LOC100276069 [Zea mays]
gi|194703770|gb|ACF85969.1| unknown [Zea mays]
gi|195620228|gb|ACG31944.1| hypothetical protein [Zea mays]
Length = 153
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
D + +L+RL+++ T L T+ KAV GLR H S ++R LA ++I GW ++ +
Sbjct: 67 DEAMVFALKRLRVVEATPTVLATTDAIKAVAGLRSHESGRVRGLACSIIGGWTTSINCDI 126
Query: 214 NATKAI 219
+ +AI
Sbjct: 127 STGRAI 132
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 135 VVGEVLRIKEILHNS-RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH--GS 191
++ ++ ++KE L + D + ++ + L L+ T +TLK+T IG LRKH +
Sbjct: 7 LITQIPKLKEHLTKALADNKEQIVIQLLTTLRTFKATTETLKSTRIGVFATELRKHPNAT 66
Query: 192 KQIRHLARTLIEGWK 206
++I+ L+R L+ WK
Sbjct: 67 EKIKQLSRELVYKWK 81
>gi|297835640|ref|XP_002885702.1| hypothetical protein ARALYDRAFT_342703 [Arabidopsis lyrata subsp.
lyrata]
gi|297331542|gb|EFH61961.1| hypothetical protein ARALYDRAFT_342703 [Arabidopsis lyrata subsp.
lyrata]
Length = 104
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 7/40 (17%)
Query: 155 SVLFESLRRLQLMALTVDTLK-------ATEIGKAVNGLR 187
SVL ESLR+LQLM+L +D LK +TEIGKAVN R
Sbjct: 19 SVLLESLRKLQLMSLNLDILKVLRFFFQSTEIGKAVNDAR 58
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
S +SL++L+ +T + L +T++GK + L KH +IR +A L+E WK +V
Sbjct: 32 SRCVDSLKQLRKFKVTSEILVSTQVGKKLRPLAKHPKDKIRAVASDLLETWKKIV 86
>gi|126343388|ref|XP_001364305.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Monodelphis domestica]
Length = 208
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L E+LR L+ + D LK+T IG VN +RKH ++ LA + W+ +++ +
Sbjct: 59 LLEALRELKKKLPSKDVLKSTRIGHTVNKMRKHSDGEVASLANEVYTEWRTFIEKHSDKP 118
Query: 217 KAIAEGTPDS 226
+ P +
Sbjct: 119 SIVVRSDPQT 128
>gi|410910842|ref|XP_003968899.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Takifugu rubripes]
Length = 626
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
L ++ +RL + +TV+ L T +GK VN RKH + + A++L+ WK LV + V
Sbjct: 25 LLKTFKRLAELPMTVEILVETGVGKTVNSFRKH--EVVGEAAKSLVGQWKKLVPQSV 79
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 161 LRRL-QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE----WVNA 215
L++L Q + T +TL+ T++G V LR+H S ++ LA+ +++ WK VDE V+A
Sbjct: 29 LKKLKQSVVPTEETLRDTKVGLTVGRLRQHESTEVSDLAKEIVKRWKSEVDEEKKRKVSA 88
Query: 216 TKAIAEGTPDSVNPSVVD 233
A A + P VD
Sbjct: 89 LTAAASTSKKPTGPRSVD 106
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L ++L+ M +T T IG AVNG+RKH S K++ LA+ LI+ WK L+D
Sbjct: 7 LLRIAKKLEKMVARKNT--TTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 59
>gi|417412675|gb|JAA52713.1| Putative rna polymerase ii transcription elongation factor
elongin/siii subunit elongin a, partial [Desmodus
rotundus]
Length = 782
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 166 LMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
++ +TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 44 ILPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 85
>gi|68390501|ref|XP_696087.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Danio rerio]
gi|325530294|sp|B0UYI1.1|TEAN2_DANRE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
Length = 210
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG-SKQ 193
V+ ++ R K IL ++ + E+L+ L + + LK+T IG VN LRKH +
Sbjct: 37 VIEDIERYKSILELPGQPKEN-MIEALKELDKKVPSREVLKSTRIGHTVNNLRKHSDDPE 95
Query: 194 IRHLARTLIEGWKDLVDEWVN 214
I+ LA+ + + W+ ++E N
Sbjct: 96 IKSLAKEVYKHWRTFIEEHAN 116
>gi|297282483|ref|XP_001103322.2| PREDICTED: transcription elongation factor B polypeptide 3 isoform
1 [Macaca mulatta]
Length = 918
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
+ +TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 180 LPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 226
>gi|356991210|ref|NP_001239336.1| transcription elongation factor B polypeptide 3 [Equus caballus]
Length = 774
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN LRKH + + + AR L+ WK LV
Sbjct: 38 ITVDILAETGVGKTVNSLRKH--EHVGNFARNLVAQWKKLV 76
>gi|402584050|gb|EJW77992.1| hypothetical protein WUBG_11100 [Wuchereria bancrofti]
Length = 261
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 8/59 (13%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLR---KHGSKQIRHLARTLIEGWKDLV 209
D+ + +LRRL + +T++ L T +GKAVN LR +HG+K ++ ++E WKD+
Sbjct: 23 DNKIGHALRRLANINMTLELLSETGVGKAVNQLRSHEQHGTKALQ-----IVEKWKDMA 76
>gi|73956434|ref|XP_853240.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Canis lupus familiaris]
Length = 208
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 118 SGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKAT 177
+G I + T E + V+ ++ R K +L D++ L E+L+ L+ + + LK+T
Sbjct: 21 AGKIYKQATIESLKRVVVIEDIKRWKTMLELP-DQTKQNLVEALQELKKKIPSREVLKST 79
Query: 178 EIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
IG VN +R+H ++ LAR + W+ +++ ++
Sbjct: 80 RIGHTVNKMRQHSDPEVACLAREVYTEWRTFIEKHLD 116
>gi|47223072|emb|CAG07159.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
V+ ++LR K IL + D+ L +L L + + LK+T+IG VN +RKH ++
Sbjct: 37 VIEDILRYKSILELPQQSKDN-LLSALTELSKKIPSREVLKSTKIGHVVNKMRKHLDPEV 95
Query: 195 RHLARTLIEGWKDLVDEWVN 214
+A + W+ V+E N
Sbjct: 96 SSVAAKVYTEWRTFVEENSN 115
>gi|344278662|ref|XP_003411112.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Loxodonta africana]
Length = 208
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++ R K IL D++ L E+L+ L+ + + LK+T IG VN +RKH ++
Sbjct: 38 VVEDIKRWKTILELP-DQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEV 96
Query: 195 RHLARTLIEGWKDLVDEWVN 214
LAR + W+ +++ ++
Sbjct: 97 ACLAREVYTEWRTFMEKHLH 116
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI K++ ++ ++ + + L+ L+ + ++++ L++T IG +VN +RK + +++
Sbjct: 8 EIIRIAKKMDKMAQKKNGAGALDLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDEEVT 67
Query: 196 HLARTLIEGWKDLV 209
LA++LI+ WK L+
Sbjct: 68 SLAKSLIKSWKKLL 81
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 138 EVLRI-KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIR 195
E++RI K++ + +S + + L+ L+ + +T++ L++T IG +VN + K + +++
Sbjct: 4 EIIRIAKKMDKMVQKKSAAGALDLLKELKNIPMTLELLQSTRIGMSVNAICKQSTNEEVT 63
Query: 196 HLARTLIEGWKDLVD 210
LA++LI+ WK L+D
Sbjct: 64 SLAKSLIKSWKKLLD 78
>gi|413916108|gb|AFW56040.1| hypothetical protein ZEAMMB73_150497 [Zea mays]
Length = 327
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 133 SQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK 192
S V+ V RI L + ++ + + E +R Q + +T + L+AT+IG V+ LRK
Sbjct: 48 SDVLTTVARIDRRL--AHEKGNDAVVELIREQQAVDMTYEVLEATKIGHTVSALRKSAPT 105
Query: 193 QIRH-LARTLIEGWKD 207
+ H LA TL WK+
Sbjct: 106 ALAHLLADTLYRQWKE 121
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
+T++ L++T IG +VN LRK + +++ LA++LI+ WK L+D
Sbjct: 1 MTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLD 43
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEWVN 214
++L++L+ +T + L +T++GK + L KH +I+ LA L+E WK +V DE N
Sbjct: 36 DALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDETRN 92
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK--AIAEGT 223
L+ T++G AVN R H S +I L + +I W+D V N K AIA GT
Sbjct: 40 LRETKVGVAVNKFRSHDSAEINGLVKKMIRNWRDAVQAEKNNKKKLAIAAGT 91
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 21/122 (17%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE-------IGKAVNGLRKHG 190
E IK I+ N SD V+ L+L+ + D +K TE +G AVN R
Sbjct: 2 EAKEIKSIVSNLEKSSDDVMI-----LKLLNILSDGVKPTEKLLRETKVGVAVNKYRSST 56
Query: 191 SKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFT 250
+ +I + + +I W+D+V N K + + S S P E F +
Sbjct: 57 NSEISSIVKKMIRNWRDMVQAEKNKKKGPTSDVKAATSGS---------STPSKENKFHS 107
Query: 251 GP 252
GP
Sbjct: 108 GP 109
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV-DEWVN 214
++L++L+ +T + L +T++GK + L KH +I+ LA L+E WK +V DE N
Sbjct: 36 DALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDETRN 92
>gi|410966506|ref|XP_003989773.1| PREDICTED: transcription elongation factor B polypeptide 3 [Felis
catus]
Length = 751
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 13 LPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 53
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 142 IKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTL 201
+K + S DE + +L+ Q +T L+ ++ G AV LR+H SKQ+ LA+ +
Sbjct: 11 VKALNSASTDEETVTILNTLK--QQAKITEAVLRESKAGLAVGKLRQHSSKQVSELAKEI 68
Query: 202 IEGWKDLVDEWVNAT 216
++ WK V+ A+
Sbjct: 69 VKKWKTEVEREKQAS 83
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
L+ L+ + +T+ L+ T IG +VNG+RKH + +++ LA+ LI+ WK L+D
Sbjct: 30 LKELKGVNMTLKLLQETRIGMSVNGIRKHCTDEEVIALAKVLIKDWKRLLD 80
>gi|443734237|gb|ELU18302.1| hypothetical protein CAPTEDRAFT_220355 [Capitella teleta]
Length = 855
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
+ + R+L +A+ ++L+ T IGK VN RKH ++ AR L+ WK+++ +
Sbjct: 165 ILKVFRKLNKLAINFNSLQNTGIGKTVNSYRKHEG-ELGEKARDLVLKWKEMISRDPSPV 223
Query: 217 KAIAEGTPDS 226
A TP S
Sbjct: 224 PASHSSTPRS 233
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 155 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK-QIRHLARTLIEGWKDLV 209
S + L++LQ + +T++ L+ T IG VN LRK ++ LA+TL++ WK L+
Sbjct: 26 SQALDMLKQLQRLPITLEILQKTHIGLTVNTLRKSSQDDEVILLAKTLVKNWKKLI 81
>gi|196010147|ref|XP_002114938.1| hypothetical protein TRIADDRAFT_58942 [Trichoplax adhaerens]
gi|190582321|gb|EDV22394.1| hypothetical protein TRIADDRAFT_58942 [Trichoplax adhaerens]
Length = 374
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 136 VGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIR 195
+ ++L+IK+ L S++ + + R L + +T LK T IGKAVN L+KH I
Sbjct: 9 IQKILQIKDRL-TSKNITKKQIIGLFRELDEIPITYQLLKTTLIGKAVNKLKKHDD-PIG 66
Query: 196 HLARTLIEGWKDLVDEWV 213
+A +++ WK + E +
Sbjct: 67 KVASRIVDKWKKMASESI 84
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWV--- 213
E L+ L +T+ L+ T IG AVN +RK +Q+ LA+ LI+ WK L+ E +
Sbjct: 16 LELLKELSSCTMTIQLLQTTRIGVAVNAVRKRCPDQQVVALAKVLIKNWKRLLGERLPRD 75
Query: 214 NATKAIAE 221
N KA E
Sbjct: 76 NGGKAKVE 83
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L SR+ +D + + LR L+ +T+ L+ T IG +VN +RKH + +++
Sbjct: 6 ELVRIAKQLDKMVSRNNTDGAM-DLLRELKSFNMTLRLLQETRIGVSVNSIRKHCTDEEV 64
Query: 195 RHLARTLIEGWKDLVDE 211
LA+ LI+ WK L+++
Sbjct: 65 IALAKVLIKDWKRLLED 81
>gi|402853358|ref|XP_003891363.1| PREDICTED: transcription elongation factor B polypeptide 3 [Papio
anubis]
Length = 801
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
+TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 63 PITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 108
>gi|384250506|gb|EIE23985.1| hypothetical protein COCSUDRAFT_53176 [Coccomyxa subellipsoidea
C-169]
Length = 151
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 139 VLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
VL K +L N+ VL SLR+L + ++ L+ T + +V LRK +I+ +A
Sbjct: 47 VLEAKAVLDNTESSPAQVL-GSLRQLSCLLVSKADLEQTGVAFSVRKLRKSSHDEIQRIA 105
Query: 199 RTLIEGWKDLV--DEWVNATKAIAEGTP 224
LIE WK LV ++ V + + + P
Sbjct: 106 SNLIEKWKKLVLAEKPVQRSAPVQQSVP 133
>gi|32699412|sp|Q63187.1|ELOA1_RAT RecName: Full=Transcription elongation factor B polypeptide 3;
AltName: Full=Elongin 110 kDa subunit; AltName:
Full=Elongin-A; Short=EloA; AltName: Full=RNA polymerase
II transcription factor SIII subunit A1; AltName:
Full=SIII p110
gi|1019649|gb|AAA82095.1| elongin A [Rattus norvegicus]
Length = 773
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN RKH +Q+ + AR L+ WK LV
Sbjct: 37 PITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLV 76
>gi|426328299|ref|XP_004024938.1| PREDICTED: transcription elongation factor B polypeptide 3 [Gorilla
gorilla gorilla]
Length = 798
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
+TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 63 PITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 108
>gi|148747304|ref|NP_058799.2| transcription elongation factor B polypeptide 3 [Rattus norvegicus]
gi|51859136|gb|AAH81815.1| Tceb3 protein [Rattus norvegicus]
gi|149024297|gb|EDL80794.1| transcription elongation factor B (SIII), polypeptide 3 [Rattus
norvegicus]
Length = 773
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN RKH +Q+ + AR L+ WK LV
Sbjct: 37 PITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLV 76
>gi|357117425|ref|XP_003560469.1| PREDICTED: uncharacterized protein LOC100832092 [Brachypodium
distachyon]
Length = 263
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWV 213
D V+ ESL L+L+ L +T++ KAV L KH S+++R LA ++ W+ V + +
Sbjct: 65 DEVMAESLETLRLVPAMPTVLASTDLAKAVGALLKHDSERVRVLASGIMSRWRASVQDNL 124
Query: 214 NATKAIAE 221
+A E
Sbjct: 125 VTVQAAME 132
>gi|348522026|ref|XP_003448527.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Oreochromis niloticus]
Length = 207
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
V+ +++R K +L D+ L +L+ L + + LK+T+IG VN +RKH ++
Sbjct: 37 VIEDIMRYKSMLELPEQSKDN-LLTALKELSKKVPSKEVLKSTKIGHTVNKMRKHLDHEV 95
Query: 195 RHLARTLIEGWKDLVDEWVN 214
+A + W+ ++E N
Sbjct: 96 SSMAAKVYTDWRTFIEENSN 115
>gi|312077149|ref|XP_003141176.1| hypothetical protein LOAG_05591 [Loa loa]
Length = 415
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 160 SLRRLQLMALTVDTLKATEIGKAVNGLRKH---GSKQIRHLARTLIEGWKDLV 209
+LRRL + +T++ L T +GKAVN LR H G+K +R ++E WKD+
Sbjct: 4 ALRRLANINMTLELLSETGVGKAVNQLRSHEQYGTKALR-----IVEKWKDMA 51
>gi|242094012|ref|XP_002437496.1| hypothetical protein SORBIDRAFT_10g028160 [Sorghum bicolor]
gi|241915719|gb|EER88863.1| hypothetical protein SORBIDRAFT_10g028160 [Sorghum bicolor]
Length = 324
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 140 LRIKEILHNSRDES---------DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG 190
+RI ++L + D+ D + E+L L++ + L +T++ + V L KHG
Sbjct: 43 VRILQLLRAATDDGVAEQLCGALDEAMAEALETLRVAPVPHGLLASTDLARTVGALEKHG 102
Query: 191 SKQIRHLARTLIEGW 205
S +IR LA ++ GW
Sbjct: 103 SPRIRRLAGDVVRGW 117
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
++L++L++ ++ D L ++++GK + L KH ++I+ +A L+E WK +V ++ T
Sbjct: 36 DALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVASDLLEMWKKIV---IDETTR 92
Query: 219 IAEGTPDS 226
GT D+
Sbjct: 93 KKNGTVDN 100
>gi|208022641|ref|NP_003189.2| transcription elongation factor B polypeptide 3 [Homo sapiens]
gi|294862430|sp|Q14241.2|ELOA1_HUMAN RecName: Full=Transcription elongation factor B polypeptide 3;
AltName: Full=Elongin 110 kDa subunit; AltName:
Full=Elongin-A; Short=EloA; AltName: Full=RNA polymerase
II transcription factor SIII subunit A1; AltName:
Full=SIII p110
Length = 798
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
+TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 63 PITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 108
>gi|303286731|ref|XP_003062655.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456172|gb|EEH53474.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 133
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 120 DIAEALTDEIEEESQV-VGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
D A+ +T V + +V+R+K+ + + D S + +LR+L M ++ D L +
Sbjct: 21 DCAKVVTSRTSSYYNVNLEDVMRLKKTIEDV-DASKDDVVHALRQLASMMMSTDLLAKSL 79
Query: 179 IGKAVNGL-RKHGSKQIRHLARTLIEGW 205
+GK+V + RKHG ++R A+ + E W
Sbjct: 80 VGKSVKRISRKHGDGEVRAAAKAIAEKW 107
>gi|218201437|gb|EEC83864.1| hypothetical protein OsI_29846 [Oryza sativa Indica Group]
gi|222640850|gb|EEE68982.1| hypothetical protein OsJ_27902 [Oryza sativa Japonica Group]
Length = 125
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF 53
+D W +FR A +IFD A+ VAA D P + RRD A++L+
Sbjct: 1 MDYWLGFFRGAGDNIFD----AIAVAASDHPAALRSRRDAFAQRLY 42
>gi|992563|gb|AAA75492.1| elongin A [Homo sapiens]
gi|12804061|gb|AAH02883.1| Transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A) [Homo sapiens]
gi|119615476|gb|EAW95070.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A), isoform CRA_a [Homo sapiens]
gi|119615477|gb|EAW95071.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A), isoform CRA_a [Homo sapiens]
gi|123991804|gb|ABM83952.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A) [synthetic construct]
gi|123999418|gb|ABM87269.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A) [synthetic construct]
gi|189053653|dbj|BAG35905.1| unnamed protein product [Homo sapiens]
gi|261858666|dbj|BAI45855.1| transcription elongation factor B (SIII), polypeptide 3 [synthetic
construct]
gi|1587716|prf||2207239A RNA polymerase II:SUBUNIT=110kD
Length = 772
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
+TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 37 PITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 82
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 135 VVGEVLRIKEILHNSRDESDSV----LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG 190
V EV RI++ + SD + L+ LQ +++ ++ L T IG VN LRK
Sbjct: 3 VEDEVFRIQKKMSKISTSSDGTGQDQALDLLKTLQTLSINLEILTKTRIGMTVNELRKSS 62
Query: 191 S-KQIRHLARTLIEGWKDLV 209
+++ LA+TLI+ WK +
Sbjct: 63 KDEEVIALAKTLIKNWKRFL 82
>gi|397478967|ref|XP_003810805.1| PREDICTED: transcription elongation factor B polypeptide 3 [Pan
paniscus]
gi|410256236|gb|JAA16085.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A) [Pan troglodytes]
gi|410305276|gb|JAA31238.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A) [Pan troglodytes]
gi|410353711|gb|JAA43459.1| transcription elongation factor B (SIII), polypeptide 3 (110kDa,
elongin A) [Pan troglodytes]
Length = 798
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
+TVD L T +GK VN LRKH + + AR L+ WK LV NA
Sbjct: 63 PITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNA 108
>gi|6009624|dbj|BAA84994.1| elongin A [Mus musculus]
Length = 773
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN RKH +Q+ + AR L+ WK LV
Sbjct: 37 PITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLV 76
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
E+D L +++RRL+ + +T D L +T++GK + L KH I+ +A L+ WK +V E
Sbjct: 27 EADRCL-DAMRRLRGLRVTTDVLVSTQVGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIE 85
>gi|297726583|ref|NP_001175655.1| Os08g0511500 [Oryza sativa Japonica Group]
gi|255678572|dbj|BAH94383.1| Os08g0511500 [Oryza sativa Japonica Group]
Length = 112
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF 53
+D W +FR A +IFD A+ VAA D P + RRD A++L+
Sbjct: 1 MDYWLGFFRGAGDNIFD----AIAVAASDHPAALRSRRDAFAQRLY 42
>gi|31543847|ref|NP_038764.2| transcription elongation factor B polypeptide 3 [Mus musculus]
gi|341941114|sp|Q8CB77.3|ELOA1_MOUSE RecName: Full=Transcription elongation factor B polypeptide 3;
AltName: Full=Elongin 110 kDa subunit; AltName:
Full=Elongin-A; Short=EloA; AltName: Full=RNA polymerase
II transcription factor SIII subunit A1; AltName:
Full=SIII p110
gi|26331534|dbj|BAC29497.1| unnamed protein product [Mus musculus]
gi|74151081|dbj|BAE27668.1| unnamed protein product [Mus musculus]
gi|74221984|dbj|BAE26815.1| unnamed protein product [Mus musculus]
gi|148698007|gb|EDL29954.1| transcription elongation factor B (SIII), polypeptide 3 [Mus
musculus]
Length = 773
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN RKH +Q+ + AR L+ WK LV
Sbjct: 37 PITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLV 76
>gi|29612546|gb|AAH49885.1| Transcription elongation factor B (SIII), polypeptide 3 [Mus
musculus]
Length = 773
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN RKH +Q+ + AR L+ WK LV
Sbjct: 37 PITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLV 76
>gi|395854666|ref|XP_003799801.1| PREDICTED: transcription elongation factor B polypeptide 3
[Otolemur garnettii]
Length = 781
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN LRKH + + + AR L+ WK LV
Sbjct: 37 PITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 76
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 149 SRDESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
+++E + + L+ LQ + T D L++T +G VN ++H S ++ L+ ++ W++
Sbjct: 20 TQNEPTANIVSLLKELQTGVKATEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRN 79
Query: 208 LVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQV 261
V+ K A G+ PSV G P P + A G + +LS++
Sbjct: 80 EVN------KQKASGS-----PSVSQRSSGSPRPAQNGTASPAGTTPSDKLSKL 122
>gi|449674744|ref|XP_002160057.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Hydra magnipapillata]
Length = 212
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV E++ +K IL D L L L+ + + L T++G +N LRKH ++++
Sbjct: 40 VVEEMIHVKNILSMPEQTIDQ-LVSCLTNLENRIPSKEVLLETKLGHVINKLRKHEAEEV 98
Query: 195 RHLARTLIEGWKDLVDEWVNATKA-------------------IAEGTPDSVNPSVVDEE 235
+ LA+ +++ WK +NA ++ IA G +N S+VD
Sbjct: 99 QQLAQKVLQKWKQFYKN-INARQSIEVKSDKKTFLFRAKAKSLIASGLKTELNNSLVDVI 157
Query: 236 EG 237
EG
Sbjct: 158 EG 159
>gi|42407536|dbj|BAD10742.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 107
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 8 LDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLF 53
+D W +FR A +IFD A+ VAA D P + RRD A++L+
Sbjct: 1 MDYWLGFFRGAGDNIFD----AIAVAASDHPAALRSRRDAFAQRLY 42
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
+ +T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 17 IPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 61
>gi|395840631|ref|XP_003793157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Otolemur garnettii]
Length = 208
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 117 SSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKA 176
+ G I + T E + VV ++ R K +L ++ L E+L+ L+ + + LK+
Sbjct: 20 TGGKIYKQATIESLKRVVVVEDIKRWKTVLELPVQTKEN-LVEALQELKKKIPSREVLKS 78
Query: 177 TEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
T IG VN +RKH ++ LA+ + WK +++ V+
Sbjct: 79 TRIGHTVNKMRKHPDSEVACLAKEVYTEWKTFIEKHVD 116
>gi|345313212|ref|XP_001517267.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Ornithorhynchus
anatinus]
Length = 208
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV +V R K +L +S+ VL E+LR L+ + + L++T+IG AV+ +R H + +
Sbjct: 38 VVEDVKRWKSMLELP-GQSEEVLTEALRELRKKIPSKEVLQSTQIGDAVSAMRGHPAPAV 96
Query: 195 RHLARTLIEGWKDLVDEWVN 214
LA ++ W+ + N
Sbjct: 97 ASLAHEVLAAWEAFLAHHAN 116
>gi|222623658|gb|EEE57790.1| hypothetical protein OsJ_08341 [Oryza sativa Japonica Group]
Length = 1564
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
+ ++ L++ IGK+VN LR H + +I+ A+ L+E WK VD + + A
Sbjct: 352 INLNALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSNDA 401
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK 217
++L+ L+ + +T+ L +T++GK + + KH ++IR LA L++ WK +V
Sbjct: 39 LDALKALRSVPVTMGILVSTQVGKRLRNVTKHPREKIRTLAAELLDAWKKVV-------- 90
Query: 218 AIAEGTPDSVNPSVVDEEEGLPS 240
+E PD+ N + E++ S
Sbjct: 91 -TSETLPDNGNKATKVEDKQFKS 112
>gi|218191559|gb|EEC73986.1| hypothetical protein OsI_08895 [Oryza sativa Indica Group]
Length = 1641
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
+ ++ L++ IGK+VN LR H + +I+ A+ L+E WK VD + + A
Sbjct: 429 INLNALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSNDA 478
>gi|302799250|ref|XP_002981384.1| hypothetical protein SELMODRAFT_444816 [Selaginella moellendorffii]
gi|300150924|gb|EFJ17572.1| hypothetical protein SELMODRAFT_444816 [Selaginella moellendorffii]
Length = 1413
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 165 QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
Q + + +D LK+ +GK+VN L+ H +I+ AR L+E WK V
Sbjct: 375 QKLPVDLDALKSCHVGKSVNNLKSHRMVEIQKKARKLVETWKKRV 419
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVD 210
+T++ L++T IG +VN +RK + +++ LA++LI+ WK L+D
Sbjct: 1 MTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 43
>gi|296490042|tpg|DAA32155.1| TPA: elongin A [Bos taurus]
Length = 265
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN LRKH + + + AR L+ WK LV
Sbjct: 38 ITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 76
>gi|334349627|ref|XP_001381354.2| PREDICTED: transcription elongation factor B polypeptide 3-like
[Monodelphis domestica]
Length = 863
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ + ++RL + +T D L T +G VNGLR G +++ +AR L+E WK+L
Sbjct: 144 VLKYIKRLNDLPITADVLVETGVGLIVNGLR--GYEEVGAMARGLVERWKNLA 194
>gi|302772979|ref|XP_002969907.1| hypothetical protein SELMODRAFT_440870 [Selaginella moellendorffii]
gi|300162418|gb|EFJ29031.1| hypothetical protein SELMODRAFT_440870 [Selaginella moellendorffii]
Length = 1416
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 165 QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
Q + + +D LK+ +GK+VN L+ H +I+ AR L+E WK V
Sbjct: 375 QKLPVDLDALKSCHVGKSVNNLKSHRMVEIQKKARKLVETWKKRV 419
>gi|255076087|ref|XP_002501718.1| predicted protein [Micromonas sp. RCC299]
gi|226516982|gb|ACO62976.1| predicted protein [Micromonas sp. RCC299]
Length = 139
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 138 EVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGL-RKHGSKQIRH 196
+V R K L ++ D + +LR L M +T D L ++ IGK V+ L RKH +++R
Sbjct: 35 DVDRYKATLEDA-DTTKEEFLTALRHLSSMLMTRDLLTSSMIGKVVSRLRRKHPDEEVRK 93
Query: 197 LARTLIEGWK 206
LA +++ WK
Sbjct: 94 LAGAMVDKWK 103
>gi|66816447|ref|XP_642233.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
gi|74856708|sp|Q54YG9.1|TCEA1_DICDI RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor tf2s
gi|60470313|gb|EAL68293.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
Length = 319
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 136 VGEVLRIKEILHNS-RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
+ E+++ +E L + +D E L+ + +T D LK+T+IGK+V LR H I
Sbjct: 1 MQEIIKCREQLEKAIKDGEFDKALECLKNAKNFKITKDLLKSTDIGKSVGKLRAHKDIGI 60
Query: 195 RHLARTLIEGWK 206
++ LI+ WK
Sbjct: 61 SSQSKELIDKWK 72
>gi|156121311|ref|NP_001095803.1| transcription elongation factor B polypeptide 3 [Bos taurus]
gi|151554223|gb|AAI49491.1| TCEB3 protein [Bos taurus]
Length = 264
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN LRKH + + + AR L+ WK LV
Sbjct: 37 PITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 76
>gi|118088956|ref|XP_419908.2| PREDICTED: transcription elongation factor B polypeptide 3 [Gallus
gallus]
Length = 598
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
E + + ++L LQ + +++D L T IGK VN RKH + ++A++L++ WK L+
Sbjct: 23 EEPAEILKALELLQDLDISLDILTETGIGKTVNSFRKHAT--AGNVAKSLVKKWKKLL 78
>gi|344287374|ref|XP_003415428.1| PREDICTED: transcription elongation factor B polypeptide 3
[Loxodonta africana]
Length = 802
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 64 ITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 102
>gi|296207023|ref|XP_002807022.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor B
polypeptide 3 [Callithrix jacchus]
Length = 895
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+TVD L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 160 ITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 198
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 149 SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKD 207
SR+ ++ L + L+ L+ + +T+ L+ T IG +VN +RKH + +++ LA+ LI+ WK
Sbjct: 19 SRNSTEGAL-DLLKELRSLKMTLKLLQETRIGMSVNSIRKHCTDEEVISLAKLLIKDWKR 77
Query: 208 LVD 210
L+D
Sbjct: 78 LLD 80
>gi|332025815|gb|EGI65972.1| Transcription elongation factor B polypeptide 3 [Acromyrmex
echinatior]
Length = 710
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRK-HGSKQ 193
+V ++ + L D D +L + +L + +TV L+ T +G+ VNGLRK HG+
Sbjct: 3 IVDKISHCQRNLETCGDNEDRILH-YISKLYNLPVTVQHLQQTGVGRTVNGLRKYHGA-- 59
Query: 194 IRHLARTLIEGWKDLV 209
+ A+TL+ WK +V
Sbjct: 60 VGDAAKTLVCKWKTMV 75
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 138 EVLRIKEILHNSRDESDSVLFES----LRRLQLMALTVDTLKATEIGKAVNGLRKHGSK- 192
EV RI + L + +++ E L +L+ + +T++ L+ T IG +VN +RK +
Sbjct: 6 EVCRIGKQLEKIVSQDSAMVPEEAVDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSNNS 65
Query: 193 QIRHLARTLIEGWKDLVDEWVNATKAIAEG 222
++ LA++LI+ WK L+ E + K G
Sbjct: 66 NVQTLAKSLIKLWKKLLPEKSGSDKKADNG 95
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
E+L+ + + ++ L +T++GK + L KH S +I A+ L+E WK +V + A
Sbjct: 36 ETLKAMGAVEVSTALLLSTQVGKRLRKLTKHQSSKISASAQQLLEEWKKVVADEA----A 91
Query: 219 IAEGTPDSVNPSVVDEEEGL-----PSP 241
GTP +P + E PSP
Sbjct: 92 SRSGTPKDASPVIKPETPARTSLVSPSP 119
>gi|147819619|emb|CAN67642.1| hypothetical protein VITISV_008187 [Vitis vinifera]
Length = 148
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 149 SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDL 208
S +ES VL +L +L + + L+ IGK+VN LR H + +I+ AR L + WK
Sbjct: 22 SAEESLLVLLHALDKL---PVNLQALQMCNIGKSVNHLRTHKNLEIQKKARNLXDTWKKR 78
Query: 209 VDEWVN---ATKAIAEGTP 224
V+ +N A +++ P
Sbjct: 79 VEAXMNINDAKSGLSQAVP 97
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD-EWVNATKAIAEGTP-------- 224
L+ T++G AVN R H + +I +L + +I W+D V E ++ K TP
Sbjct: 40 LRETKVGVAVNKFRSHENSEISNLVKKMIRNWRDAVQHEKISKKKVSGSSTPSTPATPAT 99
Query: 225 --DSVNPSVVDEEEGLPSPP 242
S N + +D + +P+ P
Sbjct: 100 PSSSTNLNSIDGAKKIPTGP 119
>gi|224058268|ref|XP_002198009.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Taeniopygia guttata]
Length = 208
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++ R K IL ++ L E+L L+ + + L +T+IG VN +RKH ++
Sbjct: 38 VVEDIKRWKSILELPGQPKEN-LMEALEELKKKIPSKEVLLSTKIGHTVNRMRKHPDPEV 96
Query: 195 RHLARTLIEGWKDLVDEWVN 214
LAR + W+ + E N
Sbjct: 97 SGLARAICREWRAFIREHSN 116
>gi|325189081|emb|CCA23608.1| ATPdependent helicase putative [Albugo laibachii Nc14]
gi|325189673|emb|CCA24157.1| ATPdependent helicase putative [Albugo laibachii Nc14]
Length = 2194
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
L RL M +T++ L+ T++GK VN LRK+ + + A L + WK+++ E V +
Sbjct: 1367 LERLTCMDITLENLRVTKLGKLVNRLRKNNDQAVVVRAEKLKKKWKNMLQENVKS 1421
>gi|291234926|ref|XP_002737397.1| PREDICTED: transcription elongation factor B polypeptide,
putative-like [Saccoglossus kowalevskii]
Length = 608
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA 220
L L M +++D L+ T IGK VNG RK G + + A+ L+ WK L+ T +
Sbjct: 32 LHELHKMPISIDILQKTGIGKLVNGFRKIGGR-VGDYAKNLVLKWKQLLTSMETVTYSET 90
Query: 221 EG 222
G
Sbjct: 91 TG 92
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L +R ++ L + L+ L +T+ L+ T IG AVN +RKH S +++
Sbjct: 6 ELVRIAKKLDKMVARKSTEGAL-DLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEV 64
Query: 195 RHLARTLIEGWKDLVDEWVNATK 217
A+ LI+ WK L++ A K
Sbjct: 65 VASAKILIKNWKRLLESSAPAKK 87
>gi|405964907|gb|EKC30346.1| Mediator of RNA polymerase II transcription subunit 26 [Crassostrea
gigas]
Length = 650
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 164 LQLMALTVDTLKATEIGKAVNGLRKHG-SKQIRHLARTLIEGWKDLVDEWVNA 215
L+ +T D L+ T IGK VN LRK ++Q+ A+ L+ W+ L++ VN
Sbjct: 53 LETYPITRDVLEQTRIGKYVNELRKKTDNEQLAKRAKKLVRNWQKLINPEVNG 105
>gi|335290681|ref|XP_003356245.1| PREDICTED: transcription elongation factor B polypeptide 3 [Sus
scrofa]
Length = 805
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 168 ALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+T+D L T +GK VN LRKH + + AR L+ WK LV
Sbjct: 63 PITIDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 102
>gi|157127129|ref|XP_001661048.1| hypothetical protein AaeL_AAEL010723 [Aedes aegypti]
gi|108873044|gb|EAT37269.1| AAEL010723-PA, partial [Aedes aegypti]
Length = 646
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L + +L + ++V LK T IG+ VNGLRK+ ++ A+ L+ WK++V A
Sbjct: 25 LVHCIGKLYRLPVSVQHLKDTGIGRTVNGLRKYDG-EVGVAAKALVSKWKNMV-----AA 78
Query: 217 KAIAEGTPDS 226
+ G PDS
Sbjct: 79 EESDTGEPDS 88
>gi|301111586|ref|XP_002904872.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095202|gb|EEY53254.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 505
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 132 ESQVVGEVLRIKEILHNSRDESDSVLFESLRRL--QLMALTVDT--LKATEIGKAVNGLR 187
E V +I E+ +SD + ++RL +L L VD L+ T+IG AVN L+
Sbjct: 6 EKDVATMARQIAEVTQRDGWKSDKSVVPDMQRLLGKLTTLKVDKDLLQRTKIGAAVNKLK 65
Query: 188 KHGSKQIRHLARTLIEGWKDLV 209
KH + +R +++L + WK+ V
Sbjct: 66 KHDDEIVRGYSQSLTKKWKNEV 87
>gi|432094022|gb|ELK25814.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 93
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLV 209
M +T+ L++T +G +VN LRK S +++ LA++LI+ WK L+
Sbjct: 1 MPVTLHLLQSTRVGMSVNALRKQSSDEEVTALAKSLIKSWKKLL 44
>gi|324513486|gb|ADY45541.1| Transcription elongation factor B polypeptide 3 [Ascaris suum]
Length = 435
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +LRRL + +T+D L T IGKAVN LR H +Q A ++ WKD+
Sbjct: 24 MRHALRRLDSINMTLDLLSETGIGKAVNQLRNH--EQYGDEALRIVNKWKDIA 74
>gi|115448613|ref|NP_001048086.1| Os02g0742000 [Oryza sativa Japonica Group]
gi|46390282|dbj|BAD15732.1| putative serine-threonine rich antigen [Oryza sativa Japonica
Group]
gi|46390326|dbj|BAD15775.1| putative serine-threonine rich antigen [Oryza sativa Japonica
Group]
gi|113537617|dbj|BAF10000.1| Os02g0742000 [Oryza sativa Japonica Group]
Length = 1671
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ + L++ IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 408 INLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVD 449
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
E+D L ++LRRL+ +T + L +T++GK + L KH I+ +A L WK +V E
Sbjct: 27 EADRCL-DALRRLRAFRVTTEVLVSTQVGKRLRYLTKHPHSDIQAMATDLFGYWKKIVIE 85
>gi|432095610|gb|ELK26748.1| Transcription elongation factor A N-terminal and central
domain-containing protein 2 [Myotis davidii]
Length = 208
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 119 GDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATE 178
G I + T E + VV ++ R K +L +++ L E+LR L+ + + LK+T
Sbjct: 22 GKIYKQATIESLKRVVVVEDIKRWKTMLELP-NQTKENLVETLRELKKKIPSKEVLKSTR 80
Query: 179 IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
IG VN +R+H ++ LA+ + W+ +++
Sbjct: 81 IGHTVNKMRQHSDSEVACLAKEVYTEWRTFIEK 113
>gi|218191558|gb|EEC73985.1| hypothetical protein OsI_08894 [Oryza sativa Indica Group]
Length = 1315
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ + L++ IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 351 INLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVD 392
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 142 IKEI-LHNSRDESDSVLFESLRRLQLMAL-TVDTLKATEIGKAVNGLRKHGSKQIRHLAR 199
+KE+ N +SD V+ L++LQ + T D L++++ G AV LR H + + LA+
Sbjct: 10 VKELNAANQAGKSDEVI-SLLKKLQAEVVPTEDLLRSSKAGVAVGKLRTHATPSVSSLAK 68
Query: 200 TLIEGWKDLVDE 211
+++ W+D V+E
Sbjct: 69 EIVKKWRDAVEE 80
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 149 SRDESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
+++E + + L+ LQ + T D L++T +G VN ++H S ++ L+ ++ W++
Sbjct: 20 TQNEPAANIVSLLKELQSGVKATEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRN 79
Query: 208 LVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQV 261
V+ K A G+ PSV G P P + A G + +LS++
Sbjct: 80 EVN------KHKASGS-----PSVSQRSSGSPRPAQNGTASPAGTTPSDKLSKL 122
>gi|410692213|ref|YP_003622834.1| putative Cellobiose phosphorylase [Thiomonas sp. 3As]
gi|294338637|emb|CAZ86966.1| putative Cellobiose phosphorylase [Thiomonas sp. 3As]
Length = 2897
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD--LVDEWVNAT 216
ESLRR TV LK E+ LR + +R +A ++ W D + +W +
Sbjct: 160 ESLRRFVAAYQTVAPLKLGELWAVPIMLRLGLIENLRRVAVRVMAEWGDRNVAGQWADRM 219
Query: 217 KAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQVFLMAWMILEILETVG 276
+AE P SV +V D P +A T G + + W+ + E+
Sbjct: 220 AEVAESDPKSVVLAVADMARSGPPMACSFVAELTRRLQGQGPALALALTWVEQALSESGH 279
Query: 277 NSSRTVKVEENLQWRTKISQSGNS 300
N R V++E Q +++ GNS
Sbjct: 280 NIERLVQLEAQQQAADQVT-IGNS 302
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA-EGTPDSVNPSVV 232
L+ T++G AVN LR H ++ L + +I+ WK+ V + ++KA E +P+S P+
Sbjct: 40 LRETKVGVAVNKLRTHADVEVSSLVKKIIKQWKEQVSKEKKSSKAPPKESSPES--PAAA 97
Query: 233 DEEEGLPSPPLD 244
SPP++
Sbjct: 98 TST----SPPVE 105
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 131 EESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG 190
EE++ V R+ +L N + + +S L + LRRL+ + +T++ L T +G +N +RK
Sbjct: 2 EETEHVAR--RLDRMLKNKKIDDESAL-KYLRRLRSIEMTLEILTKTGVGIIINKIRKES 58
Query: 191 S-KQIRHLARTLIEGWKDLV 209
++ L + +I+ WK LV
Sbjct: 59 EDPEVATLGKNMIKQWKKLV 78
>gi|170586772|ref|XP_001898153.1| RNA polymerase II:SUBUNIT=110kD. [Brugia malayi]
gi|158594548|gb|EDP33132.1| RNA polymerase II:SUBUNIT=110kD., putative [Brugia malayi]
Length = 421
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+LRRL + +T++ L T +GKAVN LR H +Q A ++E WKD+
Sbjct: 9 HALRRLANINMTLELLSETGVGKAVNQLRSH--EQYGTKALQIVEKWKDIA 57
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIA 220
L+ T++G AVN R H S +I L + +I W+D V N K +A
Sbjct: 40 LRETKVGVAVNKFRSHDSAEINGLVKKMIRNWRDAVQAEKNNKKKLA 86
>gi|291404040|ref|XP_002718370.1| PREDICTED: elongin A-like [Oryctolagus cuniculus]
Length = 835
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L + LRRL + +T D L T + K V GLR+H + + +AR L WK L +
Sbjct: 123 LRKYLRRLSALPMTADLLAQTRVRKTVKGLRRH--EIVGSVARDLAARWKKLTRVQPSPG 180
Query: 217 KAIAEGTPDS 226
+A +G+P S
Sbjct: 181 RAQ-QGSPPS 189
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 138 EVLRIKEILHNSRDESDSV----LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-K 192
EVLRI++ L N D E L+ LQ + + ++ L T IG VN LRK +
Sbjct: 6 EVLRIQKKL-NKMSSGDGTGQEQALELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDE 64
Query: 193 QIRHLARTLIEGWKDLV 209
++ LA+TLI+ WK +
Sbjct: 65 EVISLAKTLIKNWKKFL 81
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 138 EVLRIKEILHNSRDESDSV----LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG-SK 192
EVLRI++ L N D E L+ LQ + + ++ L T IG VN LRK +
Sbjct: 6 EVLRIQKKL-NKMSSGDGTGQEQALELLKILQKLPVDLELLTKTRIGMTVNALRKSSRDE 64
Query: 193 QIRHLARTLIEGWKDLV 209
++ LA+TLI+ WK +
Sbjct: 65 EVISLAKTLIKNWKKFL 81
>gi|326525977|dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
++LRRL+ + D L AT++GK + L KH + I+ +A L WK +V E
Sbjct: 36 LDALRRLREFRVNTDVLVATQVGKRLRYLTKHPNSDIQAMAADLFGYWKKVVIE 89
>gi|12848458|dbj|BAB27962.1| unnamed protein product [Mus musculus]
Length = 228
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
V+ ++ R K +L D++ L +L+ L+ + + L++T IG AVN +R+H ++
Sbjct: 37 VIEDIKRWKTMLELP-DQTKENLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHSDPEV 95
Query: 195 RHLARTLIEGWKDLVDEWVN 214
LA+ + WK +++ ++
Sbjct: 96 AGLAKEVYTEWKTFIEKHLD 115
>gi|449667121|ref|XP_004206492.1| PREDICTED: uncharacterized protein LOC101236819 [Hydra
magnipapillata]
Length = 438
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 156 VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG-SKQIRHLARTLIEGWKDLVDEWVN 214
V+ E + L+ +A+T + L+ T IG+ +N +RK +K++ A+ L+E W+ V +
Sbjct: 27 VVLEVVSCLERLAMTSEALEVTRIGRTINTMRKKTQNKELAKRAKKLVEKWRAQVLSNNH 86
Query: 215 ATKAIAEGTPDSV 227
+A+ +P S+
Sbjct: 87 IRRALNNDSPTSI 99
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLV 209
L+ LQ M +T+D L+ + +G +VN LRK S ++ + + LI+ WK L+
Sbjct: 32 LKSLQEMPMTLDLLQKSHVGLSVNTLRKKCSDSEVSGVGKKLIKQWKKLL 81
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNPSVVD 233
L+ T++G AVN R H + I L + +I WK+ V N+ K A + S V
Sbjct: 40 LRETKVGVAVNKYRSHSNSDINSLVKKMIRTWKESVQNEKNSKKKTASPVSNGNAASSVK 99
Query: 234 EE 235
EE
Sbjct: 100 EE 101
>gi|242078247|ref|XP_002443892.1| hypothetical protein SORBIDRAFT_07g003910 [Sorghum bicolor]
gi|241940242|gb|EES13387.1| hypothetical protein SORBIDRAFT_07g003910 [Sorghum bicolor]
Length = 313
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 140 LRIKEILHNSRDES---------DSVLFESLRRLQLMALTVDTLKATEIGKAVNGL-RKH 189
+RI ++L + D+ D + E+L L++ + L +T++ + V L KH
Sbjct: 43 VRILQLLRGATDDGVAEQLCGALDEAMAEALETLRVAPVPHRALASTDLARTVGALLDKH 102
Query: 190 GSKQIRHLARTLIEGWKDLVDEWVNATKAIAE 221
GS +IR LA ++ GWK V AT A+ E
Sbjct: 103 GSARIRRLAGDVVRGWK---AANVTATTAVKE 131
>gi|393246595|gb|EJD54104.1| hypothetical protein AURDEDRAFT_110720 [Auricularia delicata
TFB-10046 SS5]
Length = 806
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 151 DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLV 209
DES+ L L + + LTV+ LK T++G+ + L K S I+ +A L + W+++V
Sbjct: 269 DESNDGLIALLHVINRLPLTVELLKETKLGRYIKHLMKEPPSNAIKSVAHELEKSWREIV 328
Query: 210 DEWVNATKAIAEGTPD 225
+A AEG PD
Sbjct: 329 ------RRAEAEGMPD 338
>gi|156097126|ref|XP_001614596.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803470|gb|EDL44869.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1366
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 17/102 (16%)
Query: 142 IKEILHN-----SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH------- 189
IK+IL N + S+L L+ L+ + +T+D LK T IG +N + ++
Sbjct: 372 IKQILQNIAKRKRMKKCSSLLIHILKVLKKLNITLDHLKCTLIGVPINFIARNKVDEKNG 431
Query: 190 -----GSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDS 226
++Q+R LAR LI+ WK + D + A E + +S
Sbjct: 432 LNYTTDNEQVRTLARGLIDEWKLIRDRALTGVGAPREASSES 473
>gi|413955113|gb|AFW87762.1| hypothetical protein ZEAMMB73_054037 [Zea mays]
Length = 1641
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ + L++ IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 397 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVD 438
>gi|348664652|gb|EGZ04496.1| hypothetical protein PHYSODRAFT_536259 [Phytophthora sojae]
Length = 459
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 152 ESDSVLFESLRRL--QLMALTVDT--LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
+SD + ++RL +L LTVD L T+IG AVN L+KH + +R + +L + W D
Sbjct: 26 KSDKSVVPEMQRLLGRLTTLTVDRDLLTRTKIGAAVNKLKKHDDEVVRGYSTSLTKKWMD 85
Query: 208 LV 209
V
Sbjct: 86 QV 87
>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
Length = 1033
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ L LQ + +++D L T IGK VN RKH + ++A++L++ WK L+
Sbjct: 22 ILRVLELLQDLDISLDILTETGIGKTVNSFRKHAT--AGNVAKSLVKKWKKLI 72
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 136 VGEVLRIKEILHNSRDESDSV-LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
V +++ +KE + + E+ + + L RL+ + + D+L+ T++G ++ GL+K + I
Sbjct: 6 VTQLVSLKETMEKAHKEARYTEVLDILSRLRSWSPSADSLRQTKLGISLTGLKKSPHESI 65
Query: 195 RHLARTLIEGWKDLV 209
+ + ++ WKD V
Sbjct: 66 KQESMQIVRTWKDAV 80
>gi|413955116|gb|AFW87765.1| hypothetical protein ZEAMMB73_183564 [Zea mays]
gi|413955117|gb|AFW87766.1| hypothetical protein ZEAMMB73_183564 [Zea mays]
Length = 1626
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ + L++ IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 410 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVD 451
>gi|413920967|gb|AFW60899.1| hypothetical protein ZEAMMB73_830673 [Zea mays]
gi|413920968|gb|AFW60900.1| hypothetical protein ZEAMMB73_830673 [Zea mays]
Length = 1527
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ + L++ IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 328 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVD 369
>gi|410923941|ref|XP_003975440.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Takifugu rubripes]
Length = 209
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
V+ +++R K +L + D+ L +L L + + LK+T+IG VN +RKH ++
Sbjct: 39 VIEDIMRYKSMLELPQQSKDN-LLSALTDLSKKIPSREVLKSTKIGHVVNKMRKHLDPEV 97
Query: 195 RHLARTLIEGWKDLVDEWVN 214
+A + W+ ++E N
Sbjct: 98 SSMAAKVYTEWRTFIEENSN 117
>gi|167517100|ref|XP_001742891.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779515|gb|EDQ93129.1| predicted protein [Monosiga brevicollis MX1]
Length = 903
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN-- 214
+ E L L + +TVDTLKA+ +G VN LR + + A+ LIE W+ V E +
Sbjct: 761 VLEILEELSTVEMTVDTLKASNLGVLVNRLRGERAGSV---AQNLIEKWRHQVAEQTSPH 817
Query: 215 --ATKAIAEGTP 224
+T + + G+P
Sbjct: 818 SPSTASASSGSP 829
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
E+ + L LR LQ + T D L++T+IG VN L++H S + L+ ++ W+ V+
Sbjct: 91 ETSATLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVN 150
Query: 211 EWVNATKAIAEGTPDSVN-PSVVDEEEGLPSPPL-DELAFFTGP 252
+ A + S + P + P+P D+LA FT P
Sbjct: 151 KQKAAAGGSPAASRRSSDSPKQIPNGIAPPAPTASDKLAKFTVP 194
>gi|341900306|gb|EGT56241.1| CBN-MDT-26 protein [Caenorhabditis brenneri]
Length = 560
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 142 IKEILHNSRDESDSVLFESL-RRLQLMALTVDTLKATEIGKAVNGLRKHGSKQ---IRHL 197
IK+ L + + D L E+L + ++ M + + L+ T IG AVN LRK K+ + +
Sbjct: 30 IKKRLQLAAENDDQTLCETLLKEVRPMVTSREILEETGIGFAVNQLRKQYFKKWPALSRI 89
Query: 198 ARTLIEGWKDLVDEWVNATKAIAEG---TPDSVNPSVV 232
R +I+ W ++V E V + A TP+ ++PSV
Sbjct: 90 TREIIKSWSEIVCEEVKRPHSGASSRNTTPNVLSPSVA 127
>gi|242034999|ref|XP_002464894.1| hypothetical protein SORBIDRAFT_01g028380 [Sorghum bicolor]
gi|241918748|gb|EER91892.1| hypothetical protein SORBIDRAFT_01g028380 [Sorghum bicolor]
Length = 1399
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 169 LTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ + L++ IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 184 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVD 225
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATK----------AIAEGT 223
L+ T++G VN R H +K+I L + +I GW++ V N+ K + G+
Sbjct: 40 LRETKVGVVVNKYRGHDNKEISSLVKKMIRGWREAVQNEKNSKKKPAASSTASTPASSGS 99
Query: 224 PDSVNPSV 231
P S P+
Sbjct: 100 PASTTPNA 107
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 142 IKEI-LHNSRDESDSVLFESLRRLQLMAL-TVDTLKATEIGKAVNGLRKHGSKQIRHLAR 199
+KE+ N +SD V+ L++LQ + T D L++++ G A+ LR H + + +LA+
Sbjct: 10 VKELNAANQAGKSDEVV-SLLKKLQAEVVPTEDLLRSSKAGVAIGKLRTHTTPSVSNLAK 68
Query: 200 TLIEGWKDLVDE 211
+++ W+D V+E
Sbjct: 69 EIVKKWRDAVEE 80
>gi|380012074|ref|XP_003690114.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor B
polypeptide 3-like [Apis florea]
Length = 743
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++ + + D D V++ + +L + +TV L+ T +G+ VNGLRK+ +
Sbjct: 3 VVDKIKHYQRNIEKCDDNEDKVIY-CISKLSNLPVTVKHLQDTGVGRTVNGLRKYDG-GV 60
Query: 195 RHLARTLIEGWKDLVDEWVNATKAIAEG 222
+ A+ L+ WK +V A++ +EG
Sbjct: 61 GNAAKALVAKWKAMV-----ASEETSEG 83
>gi|168010859|ref|XP_001758121.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690577|gb|EDQ76943.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1651
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDS 226
+ + ++ LK +GK+VN LR H + +I+ AR L++ WK VD + K EG P
Sbjct: 354 LPVDLNALKTCVVGKSVNHLRGHKNVEIQKKARKLVDVWKKRVDSEM---KLSGEGKPTG 410
Query: 227 VN 228
N
Sbjct: 411 GN 412
>gi|156393336|ref|XP_001636284.1| predicted protein [Nematostella vectensis]
gi|156223386|gb|EDO44221.1| predicted protein [Nematostella vectensis]
Length = 861
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 156 VLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
++ E L+ L+ + ++VDTLK GK V L K +K+++ L+ ++++ W D+V
Sbjct: 177 LVIELLQLLKDLPVSVDTLKQGNTGKLVRSLTKVDNKEVKDLSTSVLKQWMDMV 230
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 166 LMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
L A T D ++ ++IG AV LR H K++ A+ L++ WK VD+
Sbjct: 41 LSAPTEDVIRQSKIGVAVGKLRSHSDKKVADQAKALVKDWKATVDK 86
>gi|328783010|ref|XP_003250225.1| PREDICTED: transcription elongation factor B polypeptide 3 isoform
1 [Apis mellifera]
Length = 741
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++ + + D D V++ + +L + +TV L+ T +G+ VNGLRK+ +
Sbjct: 3 VVDKIKHYQRNIEKCDDNEDRVIY-CISKLSNLPVTVQHLQDTGVGRTVNGLRKYDG-GV 60
Query: 195 RHLARTLIEGWKDLVDEWVNATKAIAEG 222
+ A+ L+ WK +V A++ +EG
Sbjct: 61 GNAAKALVAKWKAMV-----ASEETSEG 83
>gi|296083142|emb|CBI22778.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
+ L LR L + + + L+ +GK+VN L H + +I+ AR+L++ WK
Sbjct: 90 EEFLLAPLRALDKLPVNLHALQTCNVGKSVNHLCSHKNSEIKKKARSLVDTWK 142
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 174 LKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L+ T++G AVN R H + Q+ L + +I GW+D V
Sbjct: 40 LRETKVGIAVNKYRTHSNAQVSLLVKKMIRGWRDAV 75
>gi|149418245|ref|XP_001521771.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Ornithorhynchus anatinus]
Length = 748
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +T+D L T +GK VNGLRKH + + A+ L+ WK LV
Sbjct: 36 LPITIDILVETGVGKTVNGLRKH--ELVGGFAKDLVARWKRLV 76
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 170 TVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKAIAEGTPDSVNP 229
T D L+ T IG +N LR H ++ LA L+ W+D V + P P
Sbjct: 42 TEDLLRQTRIGVTINRLRTHKDPAVQRLATELVSKWRDEVKKG-----------PKKGTP 90
Query: 230 SVVDEEEGLPSPP 242
S + P+PP
Sbjct: 91 SKIANGSASPAPP 103
>gi|328783008|ref|XP_396851.4| PREDICTED: transcription elongation factor B polypeptide 3 isoform
2 [Apis mellifera]
Length = 777
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV ++ + + D D V++ + +L + +TV L+ T +G+ VNGLRK+ +
Sbjct: 3 VVDKIKHYQRNIEKCDDNEDRVIY-CISKLSNLPVTVQHLQDTGVGRTVNGLRKYDG-GV 60
Query: 195 RHLARTLIEGWKDLVDEWVNATKAIAEG 222
+ A+ L+ WK +V A++ +EG
Sbjct: 61 GNAAKALVAKWKAMV-----ASEETSEG 83
>gi|349802783|gb|AEQ16864.1| hypothetical protein [Pipa carvalhoi]
Length = 89
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNAT 216
L ++LRRL +TVD L T +GK+VN LRKH + + +A+ L+ WK + E T
Sbjct: 1 LQKTLRRL-ADPITVDILVETGVGKSVNSLRKH--EIVGDIAKNLVAQWKKVPQETPRVT 57
Query: 217 KA 218
++
Sbjct: 58 ES 59
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
ES + + L+ LQ + T D L++T+IG VN L++H S + L+ ++ W+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRAEVN 80
Query: 211 EWVNATKAIAEGTPDSVNPS 230
+ K + G+ DS P+
Sbjct: 81 K---QKKTASPGSSDSPKPT 97
>gi|195146240|ref|XP_002014095.1| GL24491 [Drosophila persimilis]
gi|194103038|gb|EDW25081.1| GL24491 [Drosophila persimilis]
Length = 699
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
E + L + +L + + + L+ T IGK VN LRK ++ ARTL+ WK +
Sbjct: 23 EDEKRLMHCITKLFNLPIKFEHLQETGIGKTVNALRKFNG-EVGVAARTLVTRWKAM--- 78
Query: 212 WVNATKAIAEGTPDSVNPSVVDEEEG 237
V A + AE TP ++ + +E+ G
Sbjct: 79 -VAAEEEPAEPTPSAIGTTSHEEDSG 103
>gi|358338815|dbj|GAA57372.1| transcription elongation factor S-II [Clonorchis sinensis]
Length = 132
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 150 RDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDL 208
+DE ++ + L+RL+ + +T+D L T +G +N +RK G+ +I L + +I+ WK L
Sbjct: 33 QDEESALKY--LKRLRGVEMTLDILTKTGVGIIINKIRKESGNSEIATLGKNIIKQWKKL 90
Query: 209 V 209
V
Sbjct: 91 V 91
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEIL---HNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRK-HGSKQ 193
EVL+I++ L +S + LR LQ + + +D L T IG VN LRK +
Sbjct: 6 EVLKIQKKLGKMTSSDGTGQEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDE 65
Query: 194 IRHLARTLIEGWKDLV 209
+ LA+TLI+ WK +
Sbjct: 66 VISLAKTLIKSWKRFL 81
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
ES + + L+ LQ + T D L++T+IG VN L++H S + L+ ++ W+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRAEVN 80
Query: 211 EWVNATKAIAEGTPDSVNPS 230
+ K + G+ DS P+
Sbjct: 81 K---QKKTASPGSSDSPKPT 97
>gi|198451405|ref|XP_001358350.2| GA19837, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131475|gb|EAL27489.2| GA19837, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 699
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
E + L + +L + + + L+ T IGK VN LRK ++ ARTL+ WK +
Sbjct: 23 EDEKRLMHCITKLFNLPIKFEHLQETGIGKTVNALRKFNG-EVGVAARTLVTRWKAM--- 78
Query: 212 WVNATKAIAEGTPDSVNPSVVDEEEG 237
V A + AE TP ++ + +E+ G
Sbjct: 79 -VAAEEEPAEPTPSAIGTTSHEEDSG 103
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 138 EVLR-IKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRH 196
E+LR IKE++ +E V+ L L+ + + D+L+AT+ G V LR + K I
Sbjct: 5 ELLRSIKELVKAIPNEPPEVVIRMLENLKKASPSEDSLRATKAGVVVGKLRSNADKSIGR 64
Query: 197 LARTLIEGWKDLVD 210
+A ++ WK V+
Sbjct: 65 VAAEVVNKWKKNVE 78
>gi|223948681|gb|ACN28424.1| unknown [Zea mays]
gi|413916220|gb|AFW56152.1| hypothetical protein ZEAMMB73_157798 [Zea mays]
Length = 355
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 20 GDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFTCKLTRCSGCDRVELAVPS 72
GD++D++D A+ AA D P + + RRD I ++L+ RC CD P+
Sbjct: 16 GDVWDLVDAALAAAARDSPGDLRARRDGIVQRLYAG-AARCRNCDADATPAPA 67
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
+F +L+ L T D ++ ++IG AV LR H K++ A++L++ WK VD+
Sbjct: 33 VFSTLKS-GLSTPTEDIIRQSKIGVAVGKLRSHSDKKVADQAKSLVKDWKATVDK 86
>gi|296222615|ref|XP_002757260.1| PREDICTED: RNA polymerase II transcription factor SIII subunit A2
[Callithrix jacchus]
Length = 750
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
L++L + +T D L T I K V LRKH + + H AR L WK L+
Sbjct: 31 LQKLSALPMTADILSETGIRKTVKSLRKH--QDVGHFARDLAARWKKLL 77
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
E+ + L LR LQ + T D L++T+IG VN L++H S + L+ ++ W+
Sbjct: 87 ETPATLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRS--- 143
Query: 211 EWVNATKAIAEGTP 224
VN K G+P
Sbjct: 144 -EVNKQKVTVGGSP 156
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 149 SRDESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKD 207
+++E + + L+ LQ + T D L++T +G VN ++H S ++ L+ ++ W++
Sbjct: 20 TQNEPAATIVSLLKELQSGVKATEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRN 79
Query: 208 LVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQV 261
V+ K G+ PSV G P P + A G + ++S++
Sbjct: 80 EVN------KQKVSGS-----PSVSQRSSGSPRPAPNGAASPAGTTPSDKMSKL 122
>gi|13385072|ref|NP_079893.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Mus musculus]
gi|147742987|sp|Q8R2M0.2|TEAN2_MOUSE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|12843080|dbj|BAB25851.1| unnamed protein product [Mus musculus]
gi|148698840|gb|EDL30787.1| RIKEN cDNA 2210012G02, isoform CRA_a [Mus musculus]
Length = 207
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 151 DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
D++ L +L+ L+ + + L++T IG AVN +R+H ++ LA+ + WK ++
Sbjct: 52 DQTKENLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHSDPEVAGLAKEVYTEWKTFIE 111
Query: 211 EWVN 214
+ ++
Sbjct: 112 KHLD 115
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L +R ++ L + L+ L +T+ L+ T IG AVN +RKH S +++
Sbjct: 6 ELVRIAKKLDKMVARKSTEGAL-DLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEV 64
Query: 195 RHLARTLIEGWKDLVD 210
A+ LI+ WK L++
Sbjct: 65 VASAKILIKNWKRLLE 80
>gi|20271478|gb|AAH28321.1| RIKEN cDNA 2210012G02 gene [Mus musculus]
Length = 207
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 151 DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
D++ L +L+ L+ + + L++T IG AVN +R+H ++ LA+ + WK ++
Sbjct: 52 DQTKENLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHSDPEVAGLAKEVYTEWKTFIE 111
Query: 211 EWVN 214
+ ++
Sbjct: 112 KHLD 115
>gi|194214656|ref|XP_001498808.2| PREDICTED: transcription elongation factor B polypeptide 3 [Equus
caballus]
Length = 763
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNA 215
L L+RL M ++V L T +GK VN L K +Q+ LAR L+ WK LV NA
Sbjct: 26 LQRDLKRLSAMPISVAILADTGVGKTVNRLCK--LEQVGSLARDLVAQWKKLVPVAGNA 82
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 138 EVLRIKEILHN--SRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQI 194
E++RI + L +R ++ L + L+ L +T+ L+ T IG AVN +RKH S +++
Sbjct: 6 ELVRIAKKLDKMVARKSTEGAL-DLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEV 64
Query: 195 RHLARTLIEGWKDLVD 210
A+ LI+ WK L++
Sbjct: 65 VASAKILIKNWKRLLE 80
>gi|297729327|ref|NP_001177027.1| Os12g0582600 [Oryza sativa Japonica Group]
gi|255670430|dbj|BAH95755.1| Os12g0582600, partial [Oryza sativa Japonica Group]
Length = 194
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 152 ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLA 198
E + L L+ L M + L+ T+IG+ VNGLRKH S ++R LA
Sbjct: 85 EPEDELLSLLQSLADMDIPYKALQETDIGRHVNGLRKHPSGEVRLLA 131
>gi|222623657|gb|EEE57789.1| hypothetical protein OsJ_08340 [Oryza sativa Japonica Group]
Length = 1183
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 169 LTVDTLKATE-------IGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
+ D + ATE IGK+VN LR H + +I+ A+ L+E WK VD
Sbjct: 284 ILADIIAATESPDCLGSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVD 332
>gi|224178736|ref|XP_002197961.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Taeniopygia guttata]
Length = 155
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 157 LFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214
L E+L L+ + + L +T+IG VN +RKH ++ LAR + W+ + E N
Sbjct: 37 LMEALEELKKKIPSKEVLLSTKIGHTVNRMRKHPDPEVSGLARAICREWRAFIREHSN 94
>gi|170034672|ref|XP_001845197.1| transcription elongation factor B polypeptide 3 [Culex
quinquefasciatus]
gi|167876068|gb|EDS39451.1| transcription elongation factor B polypeptide 3 [Culex
quinquefasciatus]
Length = 648
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 154 DSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+S L + +L + ++V L+ T IG+ VNGLRK+ ++ A+ L+ WK +V
Sbjct: 22 ESRLLHCIAKLYRLPVSVQHLQETGIGRTVNGLRKYDG-EVGVAAKALVSKWKSMV 76
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
++LRRL+ +T L +T+IG+ + L KH I+ A L+ WK +V E A
Sbjct: 41 DALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGA 100
Query: 219 IAEGTPDSV 227
+ G S
Sbjct: 101 LQNGKSSST 109
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
ES + + L+ LQ + T D L++T+IG VN L++H + + LA ++ W+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARLASEIVSKWRAEVN 80
Query: 211 EWVNATKAIAEGTP 224
+ +A +P
Sbjct: 81 KQKKTASPVASDSP 94
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
++LRRL+ +T L +T+IG+ + L KH I+ A L+ WK +V E A
Sbjct: 41 DALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEEDKKNGA 100
Query: 219 IAEGTPDSV 227
+ G S
Sbjct: 101 LQNGKSSST 109
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 158 FESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
++L+ L+ + +T+ L +T++GK + L KH + I LA L++ WK +V
Sbjct: 36 LDALKALRAVPVTMGVLVSTQVGKRLRNLTKHPQENICTLATDLLDSWKKVV 87
>gi|149020697|gb|EDL78502.1| rCG64124 [Rattus norvegicus]
Length = 189
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 162 RRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLVDEWVNA 215
+ L+ + + ++ L++T GK+VN + K + +++ LA++LI+ WK L+DE A
Sbjct: 18 KELKNICMPLELLQSTRFGKSVNAILKQSTDEEVISLAKSLIKSWKILLDEPSTA 72
>gi|414877095|tpg|DAA54226.1| TPA: hypothetical protein ZEAMMB73_377577 [Zea mays]
Length = 355
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 205 WKDLVDEWVNATKAIAEGTPDSVNPSVVDEEEGLPSPPLDELAFFTGPSAGIELSQV 261
WK +VD+WV ATKA + S+ E+ GL +PP+D A + S G E+ V
Sbjct: 101 WKAIVDDWVAATKATMDSG------SISTEDGGLATPPMDIGALYLV-SHGTEIQNV 150
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
E+ + L LR LQ + T D L++T+IG VN L++H S + L+ ++ W+
Sbjct: 21 ETPATLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRS--- 77
Query: 211 EWVNATKAIAEGTP 224
VN K G+P
Sbjct: 78 -EVNKQKVTVGGSP 90
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 159 ESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVNATKA 218
++LRRL+ +T L +T+IG+ + L KH I+ A L+ WK +V E A
Sbjct: 47 DALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGA 106
Query: 219 IAEGTPDSV 227
+ G S
Sbjct: 107 LQNGKSSST 115
>gi|71896861|ref|NP_001026076.1| transcription elongation factor B polypeptide 3 [Gallus gallus]
gi|53136335|emb|CAG32505.1| hypothetical protein RCJMB04_27k21 [Gallus gallus]
Length = 779
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 167 MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +TVD L T +GK VN LRKH + + A+ L+ WK LV
Sbjct: 35 LPITVDILVETGVGKTVNSLRKH--ELVGDFAKNLVARWKKLV 75
>gi|76154247|gb|AAX25738.2| SJCHGC09202 protein [Schistosoma japonicum]
Length = 229
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 131 EESQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHG 190
EE++ V R+ +L N + + +S L + L+RL+ + +T++ L T +G +N +RK
Sbjct: 2 EETEHVAR--RLDRMLKNKKIDDESAL-KYLKRLRNIEMTLEILTKTGVGIIINKIRKES 58
Query: 191 S-KQIRHLARTLIEGWKDLV 209
++ L + +I+ WK LV
Sbjct: 59 EDPEVATLGKNMIKQWKKLV 78
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 141 RIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLAR 199
R+ +L N + + +S L + L+RL+ + +T++ L T +G +N +RK ++ L +
Sbjct: 10 RLDRMLKNKKIDDESAL-KYLKRLRNIEMTLEILTKTGVGIIINKIRKESEDPEVATLGK 68
Query: 200 TLIEGWKDLV 209
+I+ WK LV
Sbjct: 69 NMIKQWKKLV 78
>gi|156359603|ref|XP_001624856.1| predicted protein [Nematostella vectensis]
gi|156211660|gb|EDO32756.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQI 194
VV +V R+K L + + +L +L+ L+ + L +T+IG +N LRKH + +
Sbjct: 38 VVEDVKRLKLQLESDLSTPEDIL-SALQELKAKTPSKAVLLSTQIGHTINSLRKHTCQDV 96
Query: 195 RHLARTLIEGWKDLVDEWVNATKAI 219
LA+ + WK + E AI
Sbjct: 97 CQLAKEIFRKWKHFIVEEEKEKPAI 121
>gi|308322525|gb|ADO28400.1| uncharacterized protein c1orf83 [Ictalurus furcatus]
Length = 211
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 135 VVGEVLRIKEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRK-HGSKQ 193
V+ ++ R K IL +++L +L L + + LK+T IG VN LRK H +
Sbjct: 38 VIEDIERFKSILELPGQTKENML-NALTELDRKVPSREVLKSTRIGHTVNTLRKEHPDAE 96
Query: 194 IRHLARTLIEGWKDLVDEWVN 214
++ LAR + W+ ++E N
Sbjct: 97 VKSLARQVYTRWRTFIEENAN 117
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 152 ESDSVLFESLRRLQL-MALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVD 210
E+ + L LR LQ + T D L++T+IG VN L++H S + L+ ++ W+
Sbjct: 21 ETPATLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRS--- 77
Query: 211 EWVNATKAIAEGTP 224
VN K G+P
Sbjct: 78 -EVNKQKVTVGGSP 90
>gi|307199130|gb|EFN79840.1| Transcription elongation factor B polypeptide 3 [Harpegnathos
saltator]
Length = 722
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 153 SDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDL-VDE 211
++ ++ + +L + +TV L+ T +G+ VNGLRK+ + A+ L+ WK + VDE
Sbjct: 17 NEQLILHCITKLYNLPVTVQHLQETGVGRTVNGLRKYDG-AVGDAAKALVAKWKAMVVDE 75
Query: 212 W 212
+
Sbjct: 76 Y 76
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 161 LRRLQLMALTVDTL-KATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDE 211
LR+L+ + + + L +AT+IG AV LR H +I LA+ L++ WK +++
Sbjct: 32 LRQLKEVVVPSEELIRATKIGVAVGKLRTHSHARISELAKELVKSWKSQIEK 83
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGS-KQIRHLARTLIEGWKDLV 209
L+ LQ + + +D L T IG VN LRK +++ LA+TLI+ WK +
Sbjct: 32 LKALQSLNINLDILTKTRIGMTVNELRKSSKDEEVIALAKTLIKNWKRFL 81
>gi|193700047|ref|XP_001944769.1| PREDICTED: hypothetical protein LOC100165208 [Acyrthosiphon pisum]
Length = 596
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 161 LRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +L + +TV L+ T IG+ VN LRK+ I A+TL+ WK++V
Sbjct: 36 ITKLSRLPITVQNLQNTGIGRVVNNLRKYDG-NIGESAKTLVIQWKNVV 83
>gi|91094759|ref|XP_966848.1| PREDICTED: similar to GA19837-PA, partial [Tribolium castaneum]
Length = 583
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 151 DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +D L + +L + + V L+ T +G+ VNGLRK G + A++L+ WK++V
Sbjct: 25 NRNDGKLLHYIEKLYRLPIKVVHLEQTGVGRTVNGLRKLGG-DVGDSAKSLVAKWKEMV 82
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 143 KEILHNSRDESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLI 202
K I N S + E+L++ +A T D L++T G V LR H + +++ +A ++
Sbjct: 19 KAIASNEPAHSILAIMETLKKA--VAPTEDVLRSTRAGHTVGKLRAHANHEVKSMATEIV 76
Query: 203 EGWKDLVD 210
WK V+
Sbjct: 77 TKWKKAVE 84
>gi|270016551|gb|EFA12997.1| hypothetical protein TcasGA2_TC001477 [Tribolium castaneum]
Length = 587
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 151 DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLV 209
+ +D L + +L + + V L+ T +G+ VNGLRK G + A++L+ WK++V
Sbjct: 25 NRNDGKLLHYIEKLYRLPIKVVHLEQTGVGRTVNGLRKLGG-DVGDSAKSLVAKWKEMV 82
>gi|431898766|gb|ELK07138.1| hypothetical protein PAL_GLEAN10005754 [Pteropus alecto]
Length = 242
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 65 RVELAVPSGNEFDDDEEDCKRDGCEFEAGGS-KESKVNSCRDDHVSNQIVSNFSSGDIAE 123
RVE + S EED +RDGCE+EAG +S+VN + + ++ + E
Sbjct: 126 RVEELLTSDWAVHIPEED-QRDGCEYEAGVYLSQSQVNEIEMELLKEKLQEIYLQATEQE 184
Query: 124 ALTDEIEEESQVVGEVLRIKEILHNSRDE 152
L +EI +VV E LR E L N E
Sbjct: 185 VLPEEIANRLEVVKEFLRNNEDLRNGLTE 213
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,794,424,169
Number of Sequences: 23463169
Number of extensions: 192422360
Number of successful extensions: 571469
Number of sequences better than 100.0: 699
Number of HSP's better than 100.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 396
Number of HSP's that attempted gapping in prelim test: 570755
Number of HSP's gapped (non-prelim): 765
length of query: 317
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 175
effective length of database: 9,027,425,369
effective search space: 1579799439575
effective search space used: 1579799439575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)