Query 021095
Match_columns 317
No_of_seqs 215 out of 466
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 12:40:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pqv_S STP-alpha, transcriptio 99.9 2.4E-21 8.4E-26 184.4 15.0 137 136-277 3-165 (309)
2 1wjt_A Transcription elongatio 99.8 4.5E-20 1.5E-24 151.0 2.2 79 136-214 11-91 (103)
3 2xpp_A IWS1, ECU08_0440; trans 97.8 2.6E-05 9E-10 67.1 5.5 70 141-210 65-139 (145)
4 3nfq_A Transcription factor IW 97.5 7.5E-05 2.6E-09 65.9 4.9 68 142-209 81-153 (170)
5 2lw4_A Transcription elongatio 97.2 0.00014 4.8E-09 60.0 2.5 28 248-277 2-29 (113)
6 3ndq_A Transcription elongatio 97.0 0.00023 7.7E-09 58.2 2.0 31 245-277 3-33 (108)
7 3po3_S Transcription elongatio 96.0 0.0019 6.4E-08 57.0 1.6 34 240-277 1-34 (178)
8 2b4j_C PC4 and SFRS1 interacti 93.5 0.15 5.2E-06 41.1 6.3 59 152-210 24-84 (98)
9 1z9e_A PC4 and SFRS1 interacti 91.3 0.25 8.6E-06 41.6 5.1 59 152-210 24-84 (127)
10 2dme_A PHD finger protein 3; P 66.3 2.9 9.8E-05 34.4 2.3 22 254-277 8-29 (120)
11 1nwd_B GAD, glutamate decarbox 51.3 8.7 0.0003 23.7 2.0 15 199-213 12-26 (28)
12 3nzz_A Cell invasion protein S 33.6 18 0.00061 34.4 2.1 46 269-317 52-97 (308)
13 1ich_A TNF-1, tumor necrosis f 31.9 27 0.00093 28.4 2.7 40 7-54 24-63 (112)
14 1x5b_A Signal transducing adap 20.8 1.4E+02 0.0049 25.0 5.3 79 124-210 38-128 (163)
No 1
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=99.86 E-value=2.4e-21 Score=184.40 Aligned_cols=137 Identities=20% Similarity=0.256 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHH-hcCcCcHHhhccCCcceeccccccCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 021095 136 VGEVLRIKEILHNSRDESDSVLFESLRRL-QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWKDLVDEWVN 214 (317)
Q Consensus 136 ~~EV~rIkk~Lek~~~~s~e~llelL~~L-~~v~iT~dlL~~T~IGk~VnkLRKh~s~eV~~LAk~LIkkWK~~V~~~~~ 214 (317)
++||.+|++.|++. ..+.+.++++|++| +.++||+++|++|+||++||+||||.+++|+.+|+.||++||++|..+..
T Consensus 3 ~~el~~~~~~L~k~-~~~~~~~l~~L~~L~~~~~it~~~L~~T~IG~~Vn~lrkh~~~~v~~~Ak~Li~~WK~~v~~~~~ 81 (309)
T 1pqv_S 3 SKEVLVHVKNLEKN-KSNDAAVLEILHVLDKEFVPTEKLLRETKVGVEVNKFKKSTNVEISKLVKKMISSWKDAINKNKR 81 (309)
T ss_pred HHHHHHHHHHHhcc-CCCHHHHHHHHHHHHhcCCCCHHHHHhCChhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47999999999993 46778999999999 88999999999999999999999999999999999999999999988755
Q ss_pred hccc----------c--ccCCCCCC-----CC--CC----C--CcCCCCCCCCcccCcccCCCCCCcchhhHHHHHHHHH
Q 021095 215 ATKA----------I--AEGTPDSV-----NP--SV----V--DEEEGLPSPPLDELAFFTGPSAGIELSQVFLMAWMIL 269 (317)
Q Consensus 215 ~~~a----------~--se~sp~ss-----~~--s~----~--~ee~~~P~~p~d~~af~~~~~T~d~vR~~~kc~emLy 269 (317)
.+.. . ..++|.+. ++ +. . ......+++|..++ ++.+.|++.+| ++|++|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~R--~k~r~~L~ 157 (309)
T 1pqv_S 82 SRQAQQHHQDHAPGNAEDKTTVGESVNGVQQPASSQSDAMKQDKYVSTKPRNSKNDG--VDTAIYHHKLR--DQVLKALY 157 (309)
T ss_pred CCcccccccccccccccCCCCCCCCcCCCCCCcccccccccCCCCCCCCCCCCCCCC--CCcCcCChHHH--HHHHHHHH
Confidence 4221 0 00000000 00 00 0 00112234444333 34667889999 99999999
Q ss_pred HHHHhcCC
Q 021095 270 EILETVGN 277 (317)
Q Consensus 270 ~AL~~~~~ 277 (317)
+||+.+..
T Consensus 158 ~aL~~~~~ 165 (309)
T 1pqv_S 158 DVLAKESE 165 (309)
T ss_pred HHHhcCCC
Confidence 99998754
No 2
>1wjt_A Transcription elongation factor S-II protein 3; four-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.48.3.1
Probab=99.77 E-value=4.5e-20 Score=151.00 Aligned_cols=79 Identities=34% Similarity=0.548 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHhcCC-CCChHHHHHHHHHHhcCcCcHHhhccCCcceeccccccC-CCHHHHHHHHHHHHHHHHHHHHhh
Q 021095 136 VGEVLRIKEILHNSR-DESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVDEWV 213 (317)
Q Consensus 136 ~~EV~rIkk~Lek~~-~~s~e~llelL~~L~~v~iT~dlL~~T~IGk~VnkLRKh-~s~eV~~LAk~LIkkWK~~V~~~~ 213 (317)
++||.+|+++|+++. ..+.+.++++|++|+.++||+++|++|+||++||+|||| ++++|+++|+.||++||++|..+.
T Consensus 11 e~ev~~i~k~L~k~~~~~~~~~~l~~L~~L~~~~iT~e~L~~T~IGk~Vn~LrKh~~~~~V~~lAk~Lv~~WK~~v~~~~ 90 (103)
T 1wjt_A 11 EEELLRIAKKLEKMVSRKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPR 90 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHTSCCCHHHHHHTCHHHHHHHHHHHCCCSHHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhCCCCCHHHHHHcchhHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 378999999999853 345678999999999999999999999999999999999 778999999999999999998644
Q ss_pred h
Q 021095 214 N 214 (317)
Q Consensus 214 ~ 214 (317)
+
T Consensus 91 ~ 91 (103)
T 1wjt_A 91 T 91 (103)
T ss_dssp C
T ss_pred c
Confidence 3
No 3
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=97.77 E-value=2.6e-05 Score=67.08 Aligned_cols=70 Identities=23% Similarity=0.285 Sum_probs=56.3
Q ss_pred HHHHHHhcCCC---CChHHHHHHHHHHhcCcCcHHhhccCCcceeccccccCCCH--HHHHHHHHHHHHHHHHHH
Q 021095 141 RIKEILHNSRD---ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSK--QIRHLARTLIEGWKDLVD 210 (317)
Q Consensus 141 rIkk~Lek~~~---~s~e~llelL~~L~~v~iT~dlL~~T~IGk~VnkLRKh~s~--eV~~LAk~LIkkWK~~V~ 210 (317)
.|+.-|+-.++ .+..---.+|+.|..+||+.+.|++++||++|..|.||+.+ +++++|+.||.+|...+-
T Consensus 65 ~l~~WL~PLpDgsLP~~~Ir~~lL~~L~~lPI~~e~Lk~SglGkvv~~l~k~~~et~~nk~la~~Li~~WsRpi~ 139 (145)
T 2xpp_A 65 EIKGWLEPLPDKSMPNIKIRKRLLDVLKTMKIHKEHLVTSGVGKIVYFYSINPKESKEVRASAKALVQKWTNEVF 139 (145)
T ss_dssp HHHHHHSCCTTSCCCCHHHHHHHHHHHHTSCCCHHHHHHHCHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCcCCCCCCCCHHHHHHHHHHHHHCCCCHHHhhcCCCCcchhhhhcCCccCHHHHHHHHHHHHHHHHHHh
Confidence 34445554433 34444567888889999999999999999999999999764 999999999999998663
No 4
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A
Probab=97.52 E-value=7.5e-05 Score=65.86 Aligned_cols=68 Identities=22% Similarity=0.296 Sum_probs=53.8
Q ss_pred HHHHHhcCCC---CChHHHHHHHHHHhcCcCcHHhhccCCcceeccccccCCC--HHHHHHHHHHHHHHHHHH
Q 021095 142 IKEILHNSRD---ESDSVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGS--KQIRHLARTLIEGWKDLV 209 (317)
Q Consensus 142 Ikk~Lek~~~---~s~e~llelL~~L~~v~iT~dlL~~T~IGk~VnkLRKh~s--~eV~~LAk~LIkkWK~~V 209 (317)
++.-|+-.++ .+..---.+|+.|..+||+.+.|+.++||++|+-|.||+. ++++++|..||.+|..-+
T Consensus 81 l~~WLePLpDgSLP~~~Ir~~lL~~L~~lPI~~e~Lk~SglGkvV~~l~k~~~et~~nkrla~~Li~~WsRpI 153 (170)
T 3nfq_A 81 VRIWLEPLPDGSLPSFEIQKSLFAALNDLPVKTEHLKESGLGRVVIFYTKSKRVEAQLARLAEKLIAEWTRPI 153 (170)
T ss_dssp HHHHHSCCTTSCCCCHHHHHHHHHHHHTSCCCHHHHHHHSHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhCcCCCCCCCcHHHHHHHHHHHHHCCCCHHHHhhCCCCceeeehhcCCcccHHHHHHHHHHHHHHHHHH
Confidence 3444554443 3334446788888899999999999999999999999975 499999999999996644
No 5
>2lw4_A Transcription elongation factor A protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=97.20 E-value=0.00014 Score=59.97 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=25.3
Q ss_pred ccCCCCCCcchhhHHHHHHHHHHHHHhcCC
Q 021095 248 FFTGPSAGIELSQVFLMAWMILEILETVGN 277 (317)
Q Consensus 248 f~~~~~T~d~vR~~~kc~emLy~AL~~~~~ 277 (317)
|++.+.|+|.|| ++|++|||+||+++.+
T Consensus 2 ~~p~p~t~D~vR--dk~~e~L~~aL~~~~~ 29 (113)
T 2lw4_A 2 HMPVPVTCDAVR--NKCREMLTAALQTDHD 29 (113)
T ss_dssp CCCSCCCCSTTH--HHHHHHHHHHHHSSTH
T ss_pred CCCCCCCCcHHH--HHHHHHHHHHHHcCCC
Confidence 577899999999 9999999999998765
No 6
>3ndq_A Transcription elongation factor A protein 1; helix bundle; 1.93A {Homo sapiens}
Probab=97.00 E-value=0.00023 Score=58.24 Aligned_cols=31 Identities=16% Similarity=0.070 Sum_probs=24.3
Q ss_pred cCcccCCCCCCcchhhHHHHHHHHHHHHHhcCC
Q 021095 245 ELAFFTGPSAGIELSQVFLMAWMILEILETVGN 277 (317)
Q Consensus 245 ~~af~~~~~T~d~vR~~~kc~emLy~AL~~~~~ 277 (317)
+..||+.+.|+++|| ++|++|||+||+++.+
T Consensus 3 ~~~~~~~~~t~d~vR--~k~~~lL~~aL~~~~d 33 (108)
T 3ndq_A 3 DPFTPRAPSTSDSVR--LKCREMLAAALRTGDD 33 (108)
T ss_dssp -----CCCCCCCHHH--HHHHHHHHHHTTGGGH
T ss_pred CCCCCCCCCCCChHH--HHHHHHHHHHHHcCCC
Confidence 457889999999999 9999999999999753
No 7
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=96.04 E-value=0.0019 Score=56.98 Aligned_cols=34 Identities=6% Similarity=-0.031 Sum_probs=18.8
Q ss_pred CCCcccCcccCCCCCCcchhhHHHHHHHHHHHHHhcCC
Q 021095 240 SPPLDELAFFTGPSAGIELSQVFLMAWMILEILETVGN 277 (317)
Q Consensus 240 ~~p~d~~af~~~~~T~d~vR~~~kc~emLy~AL~~~~~ 277 (317)
|+++.||+ .+++|+|+|| ++|++|||+||+.+..
T Consensus 1 r~~~~d~v--~~~~~~d~vR--dk~~~lL~~aL~~~~~ 34 (178)
T 3po3_S 1 RNSKNDGV--DTAIYHHKLR--DQVLKALYDVLAKESE 34 (178)
T ss_dssp ----------------CHHH--HHHHHHHHHHTTSSSS
T ss_pred CCccCCCc--CcCcCCChHH--HHHHHHHHHHHhcCCC
Confidence 34667784 8899999999 9999999999999765
No 8
>2b4j_C PC4 and SFRS1 interacting protein; HIV, integration, transcription, viral protein, recombinatio; 2.02A {Homo sapiens} SCOP: a.48.4.1 PDB: 3f9k_C 3hpg_G 3u88_C* 3hph_E
Probab=93.55 E-value=0.15 Score=41.12 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=50.0
Q ss_pred CChHHHHHHHHHHhcCcCcHHhhc-cCCcceeccccccC-CCHHHHHHHHHHHHHHHHHHH
Q 021095 152 ESDSVLFESLRRLQLMALTVDTLK-ATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVD 210 (317)
Q Consensus 152 ~s~e~llelL~~L~~v~iT~dlL~-~T~IGk~VnkLRKh-~s~eV~~LAk~LIkkWK~~V~ 210 (317)
.+...++++|..|..+++|.-+|+ .+.+--++.+||+. .+..|++.|..|+.+.|.++.
T Consensus 24 ~Dv~kcl~~L~~l~~l~~T~~mL~rnpe~V~t~kklRry~g~q~Ir~kA~~iY~kfK~~f~ 84 (98)
T 2b4j_C 24 LDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFL 84 (98)
T ss_dssp CCHHHHHHHHHHHHTCCCCHHHHHTTHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHhcccccHHHHhhChHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999999665 56688889999876 467999999999999999885
No 9
>1z9e_A PC4 and SFRS1 interacting protein 2; heat repeat-like, ledgf, protein binding/transcription complex; NMR {Homo sapiens} SCOP: a.48.4.1
Probab=91.31 E-value=0.25 Score=41.55 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=51.5
Q ss_pred CChHHHHHHHHHHhcCcCcHHhhc-cCCcceeccccccC-CCHHHHHHHHHHHHHHHHHHH
Q 021095 152 ESDSVLFESLRRLQLMALTVDTLK-ATEIGKAVNGLRKH-GSKQIRHLARTLIEGWKDLVD 210 (317)
Q Consensus 152 ~s~e~llelL~~L~~v~iT~dlL~-~T~IGk~VnkLRKh-~s~eV~~LAk~LIkkWK~~V~ 210 (317)
.+...++++|..|..+++|.-+|+ -+.+--++.+||+. .|..|++.|..|+.+.|.++.
T Consensus 24 ~Dv~kCl~~Leel~~l~vT~~mL~Rnpe~V~TlkklRrY~gnq~Ir~kA~~iY~kFK~lf~ 84 (127)
T 1z9e_A 24 LDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFL 84 (127)
T ss_dssp CCHHHHHHHHHHHHHSCCCHHHHGGGHHHHHHHHHHTTCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccccccHHHHhhChHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999999665 56688899999876 466999999999999999985
No 10
>2dme_A PHD finger protein 3; PHF3, TFS2M, glioblastoma multiforme, brain tumor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.28 E-value=2.9 Score=34.36 Aligned_cols=22 Identities=9% Similarity=-0.000 Sum_probs=18.7
Q ss_pred CCcchhhHHHHHHHHHHHHHhcCC
Q 021095 254 AGIELSQVFLMAWMILEILETVGN 277 (317)
Q Consensus 254 T~d~vR~~~kc~emLy~AL~~~~~ 277 (317)
+++.+| ++|+++||++|...-.
T Consensus 8 ~~d~~R--d~~r~~L~eaL~~~~~ 29 (120)
T 2dme_A 8 SADQIR--QSVRHSLKDILMKRLT 29 (120)
T ss_dssp CHHHHH--HHHHHHHHHHHHHHHT
T ss_pred CCchHH--HHHHHHHHHHHHHhcc
Confidence 458999 9999999999987543
No 11
>1nwd_B GAD, glutamate decarboxylase; calmodulin-peptide complex, calmodulin, dimer, binding protein/hydrolase comple; NMR {Petunia x hybrida}
Probab=51.30 E-value=8.7 Score=23.73 Aligned_cols=15 Identities=33% Similarity=0.652 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHhh
Q 021095 199 RTLIEGWKDLVDEWV 213 (317)
Q Consensus 199 k~LIkkWK~~V~~~~ 213 (317)
-++|..||+.|++.+
T Consensus 12 lemitawkkfveekk 26 (28)
T 1nwd_B 12 LEMITAWKKFVEEKK 26 (28)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhh
Confidence 479999999998743
No 12
>3nzz_A Cell invasion protein SIPD; needle TIP protein, PRGI, SIPB, SIPC; 1.65A {Salmonella enterica} PDB: 3o02_A* 3o00_A 3o01_A* 2ym0_A
Probab=33.57 E-value=18 Score=34.43 Aligned_cols=46 Identities=30% Similarity=0.318 Sum_probs=16.5
Q ss_pred HHHHHhcCCCCccchhhhhhHHHHHhhcccchhhhhhhccCceeeeeeC
Q 021095 269 LEILETVGNSSRTVKVEENLQWRTKISQSGNSKLLMSRMCLPRITIVYR 317 (317)
Q Consensus 269 y~AL~~~~~~~~t~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (317)
+.||+..+-+- .-|.+-..|..-+-.+.+-...+.|++||+||-|+
T Consensus 52 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~a 97 (308)
T 3nzz_A 52 LNALAKSGVSL---SAEQNENLRSAFSAPTSALFSASPMAQPRTTISDA 97 (308)
T ss_dssp HHHHHHTTCCC---CHHHHHHHHHHTCC---------------------
T ss_pred HHHHHHcCCCc---chhHHHHHHHhhCCCchhhcccCcccCCCCcccHH
Confidence 45666666554 44545588888899999999999999999999885
No 13
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=31.89 E-value=27 Score=28.45 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=29.2
Q ss_pred ChhhHHHHhhhcCCchHHHHHHHHHHHhcCCchHHHHhhhhhHHHHhh
Q 021095 7 SLDNWRNYFRSANGDIFDIIDHAVMVAALDCPKEFKLRRDRIAEKLFT 54 (317)
Q Consensus 7 ~ld~Wr~~f~~ag~di~~~Id~AI~VAA~D~p~elr~RRD~I~ErL~~ 54 (317)
+..+|+.|+|..|-. |+-|..+-.|||.. =|+...|+|-.
T Consensus 24 ~~~~WK~~aRkLGLs-----e~~Id~Ie~~~~r~---l~Eq~yqmLr~ 63 (112)
T 1ich_A 24 PPLRWKEFVKRLGLS-----DHEIDRLELQNGRC---LREAQYSMLAT 63 (112)
T ss_dssp CSTTHHHHHHHHTCC-----HHHHHHHHHHCCSC---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCC-----HHHHHHHHHHCcCC---hHHHHHHHHHH
Confidence 457999999998853 57777888888833 45666666654
No 14
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=20.75 E-value=1.4e+02 Score=25.00 Aligned_cols=79 Identities=10% Similarity=0.213 Sum_probs=44.5
Q ss_pred hhchHHHHh-HhHHHHHHHHHHHHhcCCCCChHHHHHHHHHHhcCc-----------CcHHhhccCCcceeccccccCCC
Q 021095 124 ALTDEIEEE-SQVVGEVLRIKEILHNSRDESDSVLFESLRRLQLMA-----------LTVDTLKATEIGKAVNGLRKHGS 191 (317)
Q Consensus 124 ~l~de~e~~-~~v~~EV~rIkk~Lek~~~~s~e~llelL~~L~~v~-----------iT~dlL~~T~IGk~VnkLRKh~s 191 (317)
.+||-+-.. .+..+-+..|+++|.. .+..+.+-.|.-|..+. .+.+.|.+ +-+.+ .+..+
T Consensus 38 eicD~I~~~~~~~keA~ral~krl~~---~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~e--l~~l~---~~~~~ 109 (163)
T 1x5b_A 38 DICDKVGSTPNGAKDCLKAIMKRVNH---KVPHVALQALTLLGACVANCGKIFHLEVCSRDFATE--VRAVI---KNKAH 109 (163)
T ss_dssp HHHHHHHHSSSHHHHHHHHHHHHHTC---SSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHH--HHHHH---HTTCC
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHH--HHHHH---ccCCC
Confidence 356665432 2344556677888864 34444444444444211 23444432 11222 23345
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 021095 192 KQIRHLARTLIEGWKDLVD 210 (317)
Q Consensus 192 ~eV~~LAk~LIkkWK~~V~ 210 (317)
.+|+..+..||..|.....
T Consensus 110 ~~Vk~kil~li~~W~~~f~ 128 (163)
T 1x5b_A 110 PKVCEKLKSLMVEWSEEFQ 128 (163)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 7999999999999998764
Done!