Query 021096
Match_columns 317
No_of_seqs 200 out of 781
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 07:33:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021096.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021096hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 3.2E-40 7E-45 335.5 16.5 270 2-305 147-451 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 2.5E-29 5.3E-34 231.3 11.3 127 1-127 122-250 (250)
3 TIGR00890 2A0111 Oxalate/Forma 98.2 1.8E-05 4E-10 74.1 11.5 76 207-282 197-274 (377)
4 KOG2504 Monocarboxylate transp 98.0 2.9E-05 6.3E-10 78.8 9.9 95 209-308 292-388 (509)
5 TIGR00893 2A0114 d-galactonate 97.7 0.00058 1.3E-08 63.9 12.2 73 207-279 207-282 (399)
6 PLN00028 nitrate transmembrane 97.4 0.00028 6.2E-09 70.5 6.9 74 207-280 244-320 (476)
7 PRK09556 uhpT sugar phosphate 97.4 0.00091 2E-08 66.4 9.7 71 210-280 253-326 (467)
8 TIGR00881 2A0104 phosphoglycer 97.4 0.0023 5E-08 59.8 11.9 74 207-280 208-284 (379)
9 PRK11663 regulatory protein Uh 97.2 0.0038 8.2E-08 61.4 12.2 67 211-277 239-308 (434)
10 PRK11273 glpT sn-glycerol-3-ph 97.2 0.004 8.7E-08 61.5 12.0 69 210-278 248-319 (452)
11 TIGR00894 2A0114euk Na(+)-depe 97.2 0.0053 1.2E-07 60.6 12.5 75 207-281 253-330 (465)
12 TIGR00892 2A0113 monocarboxyla 97.1 0.0036 7.8E-08 62.2 10.7 67 209-275 235-303 (455)
13 TIGR00712 glpT glycerol-3-phos 96.9 0.0092 2E-07 58.7 11.6 71 210-280 246-319 (438)
14 TIGR02332 HpaX 4-hydroxyphenyl 96.8 0.01 2.2E-07 58.0 10.7 70 211-280 238-311 (412)
15 TIGR00711 efflux_EmrB drug res 96.5 0.057 1.2E-06 53.1 13.4 72 209-280 249-323 (485)
16 TIGR00896 CynX cyanate transpo 96.4 0.0088 1.9E-07 56.6 7.2 72 208-279 190-263 (355)
17 TIGR00886 2A0108 nitrite extru 96.2 0.012 2.6E-07 55.4 6.5 75 207-281 217-294 (366)
18 PF07690 MFS_1: Major Facilita 96.0 0.025 5.3E-07 52.5 7.8 73 208-280 199-275 (352)
19 COG2223 NarK Nitrate/nitrite t 95.9 0.023 4.9E-07 56.1 7.0 74 207-280 210-286 (417)
20 COG2271 UhpC Sugar phosphate p 95.9 0.026 5.7E-07 55.9 7.4 73 210-283 247-323 (448)
21 PRK09705 cynX putative cyanate 95.8 0.02 4.3E-07 55.6 6.4 73 209-281 199-273 (393)
22 PRK09528 lacY galactoside perm 95.7 0.018 3.9E-07 56.1 5.9 74 210-283 5-81 (420)
23 KOG2533 Permease of the major 95.7 0.059 1.3E-06 54.8 9.5 94 206-300 264-361 (495)
24 TIGR00882 2A0105 oligosacchari 95.6 0.027 5.8E-07 54.3 6.6 70 214-283 1-73 (396)
25 TIGR00897 2A0118 polyol permea 95.2 0.052 1.1E-06 52.6 7.1 74 208-281 215-290 (402)
26 TIGR00886 2A0108 nitrite extru 95.2 0.039 8.5E-07 51.9 5.9 68 216-283 2-72 (366)
27 PRK14995 methyl viologen resis 95.0 0.95 2.1E-05 45.4 15.7 72 209-280 253-327 (495)
28 PRK10213 nepI ribonucleoside t 95.0 0.032 6.9E-07 54.2 4.8 68 216-283 18-90 (394)
29 KOG0569 Permease of the major 94.8 0.5 1.1E-05 47.9 13.0 77 204-280 254-337 (485)
30 PRK03633 putative MFS family t 94.8 0.074 1.6E-06 51.1 6.7 70 213-283 4-76 (381)
31 TIGR00887 2A0109 phosphate:H+ 94.5 0.47 1E-05 47.6 11.9 30 254-283 341-370 (502)
32 PRK03545 putative arabinose tr 94.3 0.09 1.9E-06 50.6 6.1 72 208-279 198-272 (390)
33 TIGR00883 2A0106 metabolite-pr 94.2 0.17 3.6E-06 47.5 7.5 75 207-281 209-288 (394)
34 PRK15403 multidrug efflux syst 94.2 0.072 1.6E-06 52.1 5.1 54 230-283 31-86 (413)
35 PRK10504 putative transporter; 94.0 0.13 2.8E-06 50.7 6.7 68 215-282 10-79 (471)
36 PRK11652 emrD multidrug resist 93.8 0.16 3.4E-06 48.8 6.7 67 217-283 10-78 (394)
37 PRK03699 putative transporter; 93.8 0.14 3E-06 49.5 6.3 68 215-282 205-275 (394)
38 TIGR00710 efflux_Bcr_CflA drug 93.7 0.19 4.1E-06 47.4 6.9 69 215-283 4-75 (385)
39 PRK10091 MFS transport protein 93.7 0.17 3.6E-06 48.6 6.6 74 209-282 193-269 (382)
40 TIGR00885 fucP L-fucose:H+ sym 93.4 0.18 3.9E-06 49.5 6.3 74 208-281 225-302 (410)
41 TIGR01299 synapt_SV2 synaptic 93.3 0.18 3.8E-06 53.8 6.6 72 212-283 160-237 (742)
42 PRK12307 putative sialic acid 93.3 0.21 4.5E-06 48.3 6.6 77 207-283 220-301 (426)
43 TIGR01272 gluP glucose/galacto 93.2 0.25 5.5E-06 46.6 6.8 73 210-282 135-212 (310)
44 PRK03699 putative transporter; 93.2 0.2 4.3E-06 48.4 6.2 69 215-283 7-77 (394)
45 PRK12382 putative transporter; 93.2 0.19 4.1E-06 48.2 6.0 74 210-283 10-86 (392)
46 PRK09556 uhpT sugar phosphate 93.1 0.21 4.6E-06 49.5 6.5 68 216-283 26-99 (467)
47 PRK09874 drug efflux system pr 93.1 0.27 5.8E-06 47.0 6.9 70 214-283 13-89 (408)
48 TIGR00900 2A0121 H+ Antiporter 93.0 0.13 2.9E-06 47.7 4.7 67 217-283 1-69 (365)
49 TIGR00710 efflux_Bcr_CflA drug 93.0 0.23 5E-06 46.8 6.3 75 208-282 199-276 (385)
50 PRK15034 nitrate/nitrite trans 93.0 0.22 4.8E-06 50.2 6.4 74 208-282 245-320 (462)
51 PRK10091 MFS transport protein 92.9 0.19 4.1E-06 48.3 5.5 69 215-283 3-73 (382)
52 PRK15402 multidrug efflux syst 92.8 0.27 5.9E-06 47.4 6.6 69 215-283 9-83 (406)
53 PRK09528 lacY galactoside perm 92.8 0.35 7.5E-06 47.0 7.4 74 208-281 216-295 (420)
54 PRK10133 L-fucose transporter; 92.6 0.23 5E-06 49.2 6.0 76 208-283 251-330 (438)
55 PRK11551 putative 3-hydroxyphe 92.6 0.33 7.1E-06 46.6 6.8 66 217-282 222-289 (406)
56 PRK03633 putative MFS family t 92.6 0.38 8.3E-06 46.1 7.3 75 207-282 192-269 (381)
57 KOG2532 Permease of the major 92.5 0.21 4.5E-06 50.4 5.5 97 204-300 247-350 (466)
58 PRK11195 lysophospholipid tran 92.5 0.25 5.4E-06 47.9 5.9 70 214-283 2-73 (393)
59 PRK03893 putative sialic acid 92.4 0.3 6.4E-06 48.3 6.5 68 216-283 21-90 (496)
60 TIGR00891 2A0112 putative sial 92.4 1.2 2.5E-05 42.2 10.2 41 243-283 267-309 (405)
61 PRK10054 putative transporter; 92.4 0.28 6E-06 47.6 6.0 69 215-283 7-78 (395)
62 TIGR00902 2A0127 phenyl propri 92.3 0.39 8.5E-06 46.2 7.0 74 207-280 197-272 (382)
63 TIGR00890 2A0111 Oxalate/Forma 92.3 0.23 4.9E-06 46.3 5.2 47 237-283 25-73 (377)
64 PRK03545 putative arabinose tr 92.1 0.22 4.8E-06 47.8 5.0 46 238-283 32-79 (390)
65 TIGR02332 HpaX 4-hydroxyphenyl 92.0 0.27 5.7E-06 48.1 5.4 43 241-283 34-78 (412)
66 TIGR00924 yjdL_sub1_fam amino 91.9 0.37 8E-06 48.3 6.5 68 216-283 11-84 (475)
67 PF06609 TRI12: Fungal trichot 91.8 0.38 8.2E-06 50.0 6.4 69 213-281 38-111 (599)
68 TIGR00889 2A0110 nucleoside tr 91.7 0.23 5E-06 48.7 4.7 76 208-283 201-286 (418)
69 TIGR00897 2A0118 polyol permea 91.5 0.41 8.8E-06 46.4 6.1 69 214-283 13-83 (402)
70 PRK11663 regulatory protein Uh 91.5 0.46 1E-05 46.6 6.6 68 216-283 24-93 (434)
71 cd06174 MFS The Major Facilita 91.4 0.36 7.8E-06 44.3 5.4 66 218-283 2-69 (352)
72 TIGR00899 2A0120 sugar efflux 91.4 0.64 1.4E-05 43.7 7.2 72 210-281 194-268 (375)
73 PRK10406 alpha-ketoglutarate t 91.2 0.67 1.5E-05 45.4 7.4 75 207-281 234-312 (432)
74 PRK10473 multidrug efflux syst 91.1 0.59 1.3E-05 44.7 6.7 74 209-282 197-273 (392)
75 TIGR00895 2A0115 benzoate tran 91.0 0.58 1.3E-05 43.9 6.5 64 215-278 250-315 (398)
76 TIGR00901 2A0125 AmpG-related 91.0 0.57 1.2E-05 44.2 6.4 76 208-283 199-280 (356)
77 PRK10489 enterobactin exporter 90.9 0.29 6.3E-06 47.5 4.4 72 211-283 13-87 (417)
78 PRK15034 nitrate/nitrite trans 90.9 0.86 1.9E-05 46.0 7.9 70 214-283 33-105 (462)
79 TIGR00879 SP MFS transporter, 90.9 0.6 1.3E-05 44.8 6.6 47 237-283 306-354 (481)
80 cd06174 MFS The Major Facilita 90.7 0.63 1.4E-05 42.6 6.3 65 215-279 175-242 (352)
81 TIGR00891 2A0112 putative sial 90.7 0.62 1.3E-05 44.1 6.4 47 237-283 34-82 (405)
82 TIGR00900 2A0121 H+ Antiporter 90.5 0.75 1.6E-05 42.6 6.7 74 208-281 203-280 (365)
83 PRK11102 bicyclomycin/multidru 90.5 0.63 1.4E-05 44.0 6.3 76 208-283 187-265 (377)
84 PRK15075 citrate-proton sympor 90.4 0.85 1.8E-05 44.7 7.3 69 212-280 234-306 (434)
85 PLN00028 nitrate transmembrane 90.2 0.6 1.3E-05 46.7 6.1 46 238-283 59-106 (476)
86 PRK11128 putative 3-phenylprop 90.2 0.74 1.6E-05 44.2 6.5 74 207-280 197-272 (382)
87 TIGR00903 2A0129 major facilit 89.9 0.94 2E-05 43.8 7.0 69 208-279 185-254 (368)
88 TIGR00881 2A0104 phosphoglycer 89.8 0.5 1.1E-05 44.0 4.9 45 239-283 19-65 (379)
89 KOG4686 Predicted sugar transp 89.7 0.69 1.5E-05 44.3 5.6 88 214-305 263-353 (459)
90 TIGR00898 2A0119 cation transp 89.7 0.67 1.5E-05 46.1 5.9 77 206-283 314-390 (505)
91 PF07690 MFS_1: Major Facilita 89.6 0.49 1.1E-05 43.7 4.6 42 240-281 22-65 (352)
92 PRK15402 multidrug efflux syst 89.6 0.88 1.9E-05 43.8 6.5 76 208-283 208-286 (406)
93 PRK11043 putative transporter; 89.6 0.98 2.1E-05 43.4 6.8 75 207-281 195-271 (401)
94 PRK08633 2-acyl-glycerophospho 89.0 0.81 1.8E-05 50.3 6.5 75 209-283 3-82 (1146)
95 PRK05122 major facilitator sup 89.0 0.93 2E-05 43.4 6.1 61 223-283 24-86 (399)
96 COG2814 AraJ Arabinose efflux 88.6 1.6 3.5E-05 43.1 7.6 73 207-280 203-278 (394)
97 PRK09584 tppB putative tripept 88.6 1.1 2.4E-05 45.2 6.6 74 210-283 15-93 (500)
98 PRK12307 putative sialic acid 88.5 1.1 2.5E-05 43.2 6.5 47 237-283 40-88 (426)
99 PRK11043 putative transporter; 88.5 0.9 1.9E-05 43.6 5.7 51 233-283 24-76 (401)
100 TIGR00711 efflux_EmrB drug res 88.4 0.59 1.3E-05 45.9 4.5 48 236-283 23-72 (485)
101 TIGR02718 sider_RhtX_FptX side 88.3 1 2.3E-05 43.1 6.0 77 207-283 200-279 (390)
102 PRK10473 multidrug efflux syst 88.2 0.97 2.1E-05 43.2 5.8 51 233-283 21-73 (392)
103 PRK11273 glpT sn-glycerol-3-ph 88.0 1.8 3.9E-05 42.7 7.6 38 246-283 59-98 (452)
104 TIGR00892 2A0113 monocarboxyla 87.8 1.2 2.6E-05 44.1 6.3 46 238-283 42-89 (455)
105 PRK11646 multidrug resistance 87.4 1.3 2.8E-05 43.1 6.0 43 241-283 37-81 (400)
106 PRK05122 major facilitator sup 87.3 2 4.3E-05 41.2 7.2 40 242-281 243-282 (399)
107 TIGR00895 2A0115 benzoate tran 87.2 1.4 3.1E-05 41.3 6.1 47 237-283 39-87 (398)
108 PRK10133 L-fucose transporter; 86.5 1.5 3.2E-05 43.4 6.0 68 216-283 27-96 (438)
109 PRK10213 nepI ribonucleoside t 86.1 2.2 4.8E-05 41.3 7.0 69 208-276 209-280 (394)
110 TIGR00893 2A0114 d-galactonate 85.6 0.69 1.5E-05 43.0 3.0 46 238-283 17-64 (399)
111 COG2814 AraJ Arabinose efflux 85.5 2 4.4E-05 42.4 6.3 80 216-300 14-95 (394)
112 PRK11102 bicyclomycin/multidru 85.3 1.4 3E-05 41.7 4.9 50 234-283 10-61 (377)
113 PF13347 MFS_2: MFS/sugar tran 85.3 2.3 5E-05 41.5 6.7 77 207-283 217-295 (428)
114 TIGR00712 glpT glycerol-3-phos 84.9 1.4 3E-05 43.2 4.9 43 241-283 52-96 (438)
115 PRK09705 cynX putative cyanate 84.9 2.9 6.3E-05 40.3 7.1 66 218-283 9-79 (393)
116 TIGR00899 2A0120 sugar efflux 84.7 1.6 3.5E-05 41.0 5.1 41 241-281 24-66 (375)
117 PRK10504 putative transporter; 84.5 2 4.3E-05 42.3 5.9 74 209-283 255-332 (471)
118 PRK15462 dipeptide/tripeptide 84.4 2 4.2E-05 43.8 5.8 40 243-282 38-80 (493)
119 TIGR00805 oat sodium-independe 84.2 2.2 4.7E-05 44.7 6.2 72 207-278 322-397 (633)
120 PRK10642 proline/glycine betai 83.9 3.6 7.8E-05 41.1 7.5 45 238-282 273-320 (490)
121 PRK10207 dipeptide/tripeptide 83.3 2.7 5.8E-05 42.4 6.3 42 242-283 42-86 (489)
122 PRK03893 putative sialic acid 83.3 2.4 5.2E-05 41.8 5.9 47 236-282 296-345 (496)
123 PRK14995 methyl viologen resis 83.3 2.5 5.3E-05 42.4 6.0 47 237-283 28-76 (495)
124 TIGR00792 gph sugar (Glycoside 82.8 1.6 3.6E-05 42.1 4.4 74 207-281 214-290 (437)
125 PRK10077 xylE D-xylose transpo 82.7 3.2 7E-05 40.7 6.5 33 251-283 58-90 (479)
126 PRK11551 putative 3-hydroxyphe 82.5 3.5 7.5E-05 39.5 6.5 45 239-283 39-85 (406)
127 TIGR00882 2A0105 oligosacchari 82.2 2.7 5.9E-05 40.3 5.7 73 207-280 207-286 (396)
128 PTZ00207 hypothetical protein; 81.9 2.8 6.1E-05 43.6 5.9 64 217-281 27-94 (591)
129 TIGR00879 SP MFS transporter, 81.6 3 6.5E-05 39.9 5.7 33 251-283 74-106 (481)
130 PRK11902 ampG muropeptide tran 81.6 3.7 8E-05 39.6 6.3 75 207-281 201-279 (402)
131 PRK12382 putative transporter; 80.9 4.9 0.00011 38.4 6.9 42 241-282 242-283 (392)
132 PRK15011 sugar efflux transpor 80.6 3.6 7.8E-05 39.6 5.9 46 237-282 238-286 (393)
133 PRK09848 glucuronide transport 80.1 2.2 4.8E-05 41.9 4.3 52 245-296 39-93 (448)
134 PRK06814 acylglycerophosphoeth 80.1 15 0.00033 40.7 11.2 77 207-283 217-296 (1140)
135 PRK09952 shikimate transporter 79.6 4.7 0.0001 39.6 6.4 72 211-282 245-320 (438)
136 PRK08633 2-acyl-glycerophospho 78.0 4.1 8.8E-05 44.9 5.9 74 208-281 225-302 (1146)
137 PRK09874 drug efflux system pr 77.1 5.6 0.00012 37.9 6.0 31 252-282 262-292 (408)
138 TIGR01301 GPH_sucrose GPH fami 76.5 5.4 0.00012 40.4 5.9 50 234-283 23-78 (477)
139 TIGR00885 fucP L-fucose:H+ sym 75.9 6.4 0.00014 38.5 6.1 67 216-283 4-73 (410)
140 PRK11010 ampG muropeptide tran 75.5 6.8 0.00015 39.4 6.3 72 208-280 215-291 (491)
141 KOG0252 Inorganic phosphate tr 75.2 2.1 4.6E-05 43.3 2.5 29 255-283 91-119 (538)
142 COG2271 UhpC Sugar phosphate p 75.1 3.9 8.4E-05 40.9 4.3 64 241-311 55-120 (448)
143 PRK06814 acylglycerophosphoeth 75.1 6.4 0.00014 43.6 6.5 73 209-281 5-85 (1140)
144 TIGR00903 2A0129 major facilit 74.2 5 0.00011 38.7 4.8 43 238-280 14-58 (368)
145 TIGR00889 2A0110 nucleoside tr 73.3 8.5 0.00018 37.7 6.3 39 242-280 30-70 (418)
146 KOG2563 Permease of the major 73.3 4 8.7E-05 41.1 3.9 77 207-283 258-336 (480)
147 TIGR00792 gph sugar (Glycoside 72.4 4.3 9.2E-05 39.2 3.9 40 244-283 29-70 (437)
148 PRK11652 emrD multidrug resist 72.0 12 0.00027 35.6 7.0 70 208-280 200-271 (394)
149 PRK10077 xylE D-xylose transpo 71.8 6.6 0.00014 38.4 5.2 46 238-283 294-341 (479)
150 TIGR00898 2A0119 cation transp 71.8 2.5 5.4E-05 42.0 2.2 33 251-283 130-162 (505)
151 KOG0255 Synaptic vesicle trans 71.6 3.1 6.8E-05 41.7 2.8 33 251-283 121-153 (521)
152 PRK11128 putative 3-phenylprop 71.5 13 0.00027 35.6 6.9 47 238-284 27-75 (382)
153 KOG0254 Predicted transporter 71.4 4.4 9.6E-05 40.8 3.9 33 251-283 92-124 (513)
154 KOG0569 Permease of the major 71.0 2.8 6.1E-05 42.6 2.3 29 252-280 64-92 (485)
155 KOG0253 Synaptic vesicle trans 70.8 12 0.00027 37.2 6.5 30 254-283 387-416 (528)
156 PF11700 ATG22: Vacuole efflux 70.6 12 0.00026 37.9 6.7 71 207-278 273-347 (477)
157 PF00083 Sugar_tr: Sugar (and 70.6 0.27 5.9E-06 48.0 -5.0 76 206-281 239-319 (451)
158 PF12832 MFS_1_like: MFS_1 lik 69.8 8.1 0.00018 28.9 4.1 60 221-283 9-70 (77)
159 TIGR00896 CynX cyanate transpo 69.7 7.4 0.00016 36.5 4.8 46 238-283 23-70 (355)
160 TIGR00902 2A0127 phenyl propri 68.8 11 0.00024 36.0 5.9 47 237-283 26-74 (382)
161 PRK10489 enterobactin exporter 67.9 14 0.00031 35.6 6.5 69 209-278 218-289 (417)
162 PRK09669 putative symporter Ya 67.4 7.6 0.00016 38.1 4.5 76 207-283 221-299 (444)
163 PRK09952 shikimate transporter 66.7 20 0.00044 35.1 7.4 25 259-283 75-99 (438)
164 PF01306 LacY_symp: LacY proto 66.6 11 0.00024 37.5 5.5 70 212-283 4-78 (412)
165 TIGR00887 2A0109 phosphate:H+ 65.2 8.1 0.00018 38.6 4.3 33 251-283 59-91 (502)
166 TIGR00805 oat sodium-independe 64.8 3.1 6.8E-05 43.5 1.2 62 238-299 56-121 (633)
167 PRK10642 proline/glycine betai 64.7 15 0.00032 36.7 6.0 29 255-283 64-92 (490)
168 PRK15011 sugar efflux transpor 64.2 19 0.00041 34.6 6.5 66 216-282 16-85 (393)
169 PF03825 Nuc_H_symport: Nucleo 61.8 25 0.00054 34.6 6.9 65 215-282 5-71 (400)
170 PRK10429 melibiose:sodium symp 58.5 12 0.00026 37.2 4.1 74 209-282 225-300 (473)
171 KOG0254 Predicted transporter 58.4 31 0.00067 34.7 7.1 71 212-283 292-364 (513)
172 PRK10054 putative transporter; 58.2 19 0.00042 34.7 5.4 73 208-280 199-276 (395)
173 PF00083 Sugar_tr: Sugar (and 58.0 2.7 5.9E-05 40.9 -0.6 32 251-282 49-80 (451)
174 TIGR00880 2_A_01_02 Multidrug 57.4 26 0.00055 27.0 5.1 33 3-35 79-112 (141)
175 PRK11462 putative transporter; 57.2 26 0.00055 34.9 6.2 74 208-281 221-296 (460)
176 PRK11010 ampG muropeptide tran 57.1 26 0.00055 35.2 6.2 53 227-280 23-82 (491)
177 TIGR00880 2_A_01_02 Multidrug 56.4 6.3 0.00014 30.6 1.4 29 255-283 5-33 (141)
178 COG0738 FucP Fucose permease [ 56.3 73 0.0016 31.8 8.9 72 207-278 228-302 (422)
179 COG3104 PTR2 Dipeptide/tripept 55.2 19 0.0004 36.8 4.7 84 209-300 23-109 (498)
180 PF05977 MFS_3: Transmembrane 54.6 24 0.00053 36.1 5.6 67 208-283 3-80 (524)
181 KOG2615 Permease of the major 52.3 6.4 0.00014 39.1 0.9 29 252-280 72-100 (451)
182 KOG3764 Vesicular amine transp 52.1 18 0.0004 36.1 4.0 60 2-63 186-250 (464)
183 PRK11902 ampG muropeptide tran 50.1 31 0.00067 33.1 5.4 52 227-280 10-69 (402)
184 PRK15075 citrate-proton sympor 49.2 30 0.00066 33.7 5.2 46 238-283 38-91 (434)
185 PRK10406 alpha-ketoglutarate t 48.6 18 0.00039 35.3 3.5 25 259-283 74-98 (432)
186 PRK09848 glucuronide transport 48.3 21 0.00046 34.9 3.9 75 208-282 221-298 (448)
187 TIGR01299 synapt_SV2 synaptic 48.0 19 0.00042 38.5 3.8 30 254-283 601-630 (742)
188 KOG2504 Monocarboxylate transp 45.9 46 0.00099 34.0 6.0 69 215-283 132-201 (509)
189 PF06813 Nodulin-like: Nodulin 43.1 89 0.0019 28.9 6.9 77 224-306 9-89 (250)
190 PRK09669 putative symporter Ya 39.3 37 0.0008 33.2 4.1 36 251-286 48-84 (444)
191 PRK15403 multidrug efflux syst 38.8 88 0.0019 30.4 6.6 42 208-249 211-253 (413)
192 TIGR00883 2A0106 metabolite-pr 38.5 41 0.0009 31.1 4.1 23 261-283 48-70 (394)
193 PRK11195 lysophospholipid tran 36.1 88 0.0019 30.1 6.1 71 209-279 199-272 (393)
194 PF06609 TRI12: Fungal trichot 36.0 5.4E+02 0.012 27.0 13.7 30 252-282 353-382 (599)
195 COG2223 NarK Nitrate/nitrite t 35.1 83 0.0018 31.4 5.6 39 243-281 42-82 (417)
196 KOG2325 Predicted transporter/ 35.0 19 0.00041 36.7 1.3 98 204-301 374-474 (488)
197 PF03825 Nuc_H_symport: Nucleo 34.2 1.4E+02 0.003 29.4 7.2 74 207-283 199-274 (400)
198 PRK11646 multidrug resistance 31.7 1.2E+02 0.0025 29.3 6.1 19 207-225 200-218 (400)
199 PF05631 DUF791: Protein of un 31.4 1.4E+02 0.003 29.2 6.4 61 216-280 38-101 (354)
200 COG2270 Permeases of the major 28.8 1E+02 0.0022 31.0 5.2 73 207-280 244-320 (438)
201 TIGR00806 rfc RFC reduced fola 27.7 1.8E+02 0.004 29.8 6.8 66 218-283 25-97 (511)
202 PRK10429 melibiose:sodium symp 27.3 74 0.0016 31.5 4.0 27 252-278 46-72 (473)
203 COG4858 Uncharacterized membra 26.9 2.9E+02 0.0063 24.7 7.0 71 31-102 115-186 (226)
204 TIGR00894 2A0114euk Na(+)-depe 26.6 1.4E+02 0.003 29.2 5.7 33 3-35 389-421 (465)
205 PF13347 MFS_2: MFS/sugar tran 23.8 41 0.00089 32.7 1.4 30 251-280 40-73 (428)
206 TIGR00901 2A0125 AmpG-related 22.3 1.5E+02 0.0033 27.5 4.9 30 2-31 110-140 (356)
207 PRK11462 putative transporter; 21.0 92 0.002 30.9 3.3 49 252-301 49-98 (460)
208 PF03137 OATP: Organic Anion T 20.8 33 0.00071 35.3 0.0 61 237-300 25-85 (539)
209 COG2211 MelB Na+/melibiose sym 20.8 1.2E+02 0.0025 30.9 3.9 77 224-300 22-101 (467)
210 PF11460 DUF3007: Protein of u 20.2 1.3E+02 0.0028 24.2 3.2 56 7-66 2-61 (104)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=335.48 Aligned_cols=270 Identities=20% Similarity=0.271 Sum_probs=207.4
Q ss_pred ccCCCCCchhHHHHHHhhhhHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhheeeeeecCCCCC------CCCCCCc
Q 021096 2 RNFPLSRGTVSGILKGYAGIAAAIYTVLYNMVLQNSATTLLLFLALGIPLICLVTTYFIRACTPASG------EDSSEHG 75 (317)
Q Consensus 2 ~nFP~~RG~vvgi~k~~~GLSaaIfs~i~~~ff~~d~~~fllfLa~~~~~v~~l~~~fir~~p~~~~------~~~~~~~ 75 (317)
+|||++||+++|+.|++.|+|++|+++++.+++.++.+.+++++++++.++++++++++|.+|++.. .+++|+.
T Consensus 147 ~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~ 226 (591)
T PTZ00207 147 SVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKA 226 (591)
T ss_pred HhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999987642 1233444
Q ss_pred -----------------chhhHHHHHHHHHHHHHHHHHhhcccccchhhHHHHHHHHH-HHHhcc-cccceeeccccccc
Q 021096 76 -----------------HFVFTQAASVFLAIYVVAISITSDYVSLSDALSYILVAIMV-VFMLSP-LAIPVKMTLFPATK 136 (317)
Q Consensus 76 -----------------~f~~~~~~~v~l~~yl~~~~i~~~~~~~s~~~~~~~~~~~~-~ll~~p-~~i~~~~~~~~~~~ 136 (317)
+|..++.+++++++||++++++++|++++++.+..++++++ ++++.| +++|++. .++..
T Consensus 227 ~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~--~~~~~ 304 (591)
T PTZ00207 227 QRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT--FDGKR 304 (591)
T ss_pred HHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH--hccCC
Confidence 88899999999999999999999999999999999999888 666677 6666644 33211
Q ss_pred cccccCCCCCcccccCCCCCCCCCCCCCCccccccCCCCCCCCCchhHHHHHhccCcccccCCCCCCCCCCHHhhhhhhh
Q 021096 137 KRIRSAGSSDSLAQEGGDSTQTDPLLTPSSSAAYLGSFYETEDFSDVEILLAIGEGAVKEKRRPRRGEDFKLGEAFVKAD 216 (317)
Q Consensus 137 ~~~~~~~~~~~~~~~~d~~~~~~~ll~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~~~d~t~~~~l~t~~ 216 (317)
.+ ++ +|. +..+. . + .+.+. . +++.+. .+.+.++. +|++|+ |++|++++.|
T Consensus 305 ~~----~~-------~~~-~~~~~--~-~--~~~~~-~---~~~~~~------~~~~~~~~-~P~~~~--t~~q~l~~~d 354 (591)
T PTZ00207 305 PH----DD-------SDG-KAKEH--V-E--AGEEV-S---AAEDKV------VETDVDYI-APQFQE--TFIEGLKTAR 354 (591)
T ss_pred cC----CC-------ccc-ccccc--c-c--ccccc-c---cccccc------ccccccCC-CCCCcc--hHHHHHhchh
Confidence 10 00 000 00000 0 0 00000 0 000000 00112222 388887 9999999999
Q ss_pred HHHHHHHHHHhhcchhheecchHHHHHHh-CC-Cch--hH-HHHHHHhhhcccccccchhhhhhhhhhh----HHH-HHH
Q 021096 217 FWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GV-NDT--TE-LLCLFSLCNFAGRLGSGVLSEHYVRSLL----LCS-YLR 286 (317)
Q Consensus 217 Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~-~~~--~~-~vsl~si~n~~GRl~~G~~SD~~~r~~~----~~r-~~~ 286 (317)
||++|+.++|+.|+|++++||++||++|+ |+ .+. +. +|+++|+||++||+++|++| .+.||++ +|| ..+
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIAL 433 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHH
Confidence 99999999999999999999999999999 77 333 33 89999999999999999998 7777766 899 555
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 021096 287 SIKLGRKCKCFLVLFEKFQ 305 (317)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~ 305 (317)
.+... |+++|++++-...
T Consensus 434 ~~~~~-~~~~~lll~~~~p 451 (591)
T PTZ00207 434 FIPSV-CIITMLTLFLTLP 451 (591)
T ss_pred HHHHH-HHHHHHHHHHHCC
Confidence 66666 9999999966554
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.96 E-value=2.5e-29 Score=231.32 Aligned_cols=127 Identities=44% Similarity=0.792 Sum_probs=120.5
Q ss_pred CccCCCCCchhHHHHHHhhhhHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhheeeeeecCCCC--CCCCCCCcchh
Q 021096 1 MRNFPLSRGTVSGILKGYAGIAAAIYTVLYNMVLQNSATTLLLFLALGIPLICLVTTYFIRACTPAS--GEDSSEHGHFV 78 (317)
Q Consensus 1 v~nFP~~RG~vvgi~k~~~GLSaaIfs~i~~~ff~~d~~~fllfLa~~~~~v~~l~~~fir~~p~~~--~~~~~~~~~f~ 78 (317)
+||||+|||+|+|++|+|+||||+||+++|+++|++|+++|++|+|++|.++++++++++|++|+++ +++++|+++|.
T Consensus 122 ~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~ 201 (250)
T PF06813_consen 122 VRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFL 201 (250)
T ss_pred HHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999743 44567888999
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccchhhHHHHHHHHHHHHhcccccce
Q 021096 79 FTQAASVFLAIYVVAISITSDYVSLSDALSYILVAIMVVFMLSPLAIPV 127 (317)
Q Consensus 79 ~~~~~~v~l~~yl~~~~i~~~~~~~s~~~~~~~~~~~~~ll~~p~~i~~ 127 (317)
..+.+++++++|++++++++++++++++.++.++++++++|++|++||+
T Consensus 202 ~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~llL~~Pl~i~~ 250 (250)
T PF06813_consen 202 FFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLLLLLLPLAIPV 250 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999999999999999999999999985
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.17 E-value=1.8e-05 Score=74.10 Aligned_cols=76 Identities=25% Similarity=0.434 Sum_probs=59.4
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+.++.++++++|.+++.+++.......+.+....+.++++.++ .....++.++.+.+||+..|+++||++||+.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 274 (377)
T TIGR00890 197 TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMS 274 (377)
T ss_pred hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3467888899999998888776666666666666777777654 346788899999999999999999999876543
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.00 E-value=2.9e-05 Score=78.82 Aligned_cols=95 Identities=22% Similarity=0.204 Sum_probs=70.0
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHHHHHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSYLR 286 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~~~ 286 (317)
++.++++.||.+.+...+....-.+-.--+...+++.+++ +++.+++++++.|.+||++.|++.|+-..++. ++.
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~ 368 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLF 368 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHH
Confidence 6899999999998877777666666666777788888886 46789999999999999999999998873221 444
Q ss_pred HHHHHHHHHHHHHHHHhhccce
Q 021096 287 SIKLGRKCKCFLVLFEKFQTTV 308 (317)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~ 308 (317)
.+++...+++.+.+ .+.++.
T Consensus 369 ~~~ll~~gl~~~~~--p~~~~~ 388 (509)
T KOG2504|consen 369 LLTLLIAGLARLFL--PFATTY 388 (509)
T ss_pred HHHHHHHHHHHHHH--HHhccH
Confidence 45555555555443 555543
No 5
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.68 E-value=0.00058 Score=63.93 Aligned_cols=73 Identities=21% Similarity=0.155 Sum_probs=58.6
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
+.++.++++++|.+++..++.......+......+.++ ++.+. .....++..+++.+|++..|+++||++||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 207 QIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred chHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 56788999999999998888777777666666666654 46543 346778888999999999999999999985
No 6
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.43 E-value=0.00028 Score=70.51 Aligned_cols=74 Identities=23% Similarity=0.303 Sum_probs=57.8
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.+++.++++.+|++++.+++..+....+.+....+.+ ..|.+ ++..+.++..+++.+||+++|+++||++||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~ 320 (476)
T PLN00028 244 VLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFG 320 (476)
T ss_pred HHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcC
Confidence 4577889999999999887777766665555555544 45765 34568889999999999999999999998754
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.38 E-value=0.00091 Score=66.41 Aligned_cols=71 Identities=20% Similarity=0.215 Sum_probs=52.2
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+.++++.+|.+++..+|..+.-..+..-.....+ .+|.+. +....++..+++.+|++..|+++||++||+.
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~ 326 (467)
T PRK09556 253 YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA 326 (467)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch
Confidence 4789999999999887766554333333443443 456653 4567788889999999999999999998754
No 8
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.36 E-value=0.0023 Score=59.85 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=51.4
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHH-HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
..++.++++.+|.+.+..++.......+........ +.++.+. .....++..+.+.+|+++.|+++||..+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 284 (379)
T TIGR00881 208 FLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR 284 (379)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc
Confidence 456788999999988877665554433333344444 3456653 3567788899999999999999998755443
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.23 E-value=0.0038 Score=61.40 Aligned_cols=67 Identities=24% Similarity=0.325 Sum_probs=44.3
Q ss_pred hhhhhhHHHHHHHHHHhhcchhheecchHHHH-HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhh
Q 021096 211 AFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVR 277 (317)
Q Consensus 211 ~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r 277 (317)
.++++.+|.+.+.+++....-..+..-...+. +..|.+. +....+++.+++.+||++.|+++||+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~ 308 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFN 308 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 56788999987765553332211222233333 3456653 4567888999999999999999999943
No 10
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.20 E-value=0.004 Score=61.53 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=48.7
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCC--chhHHHHHHHhhhcccccccchhhhhhhhh
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~ 278 (317)
..+|++.+|.+++.+++....-.....-.....++ .+++ ......++.++++.+|++++|+++||++++
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 248 YVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 36788999998888776654333334445555554 4555 334566788899999999999999999643
No 11
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.17 E-value=0.0053 Score=60.62 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=56.6
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.+++.++++.+|.+++..++.......+..-+..+.+ .+|.+. .....++..+++.+|+++.|+++|++.+|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~ 330 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTL 330 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999887766655555555555544 456653 34567788899999999999999999876543
No 12
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.11 E-value=0.0036 Score=62.18 Aligned_cols=67 Identities=13% Similarity=0.126 Sum_probs=49.5
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCC--chhHHHHHHHhhhcccccccchhhhhh
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHY 275 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~ 275 (317)
.+.++++.||.+.+..++...+-.........+.++++++ +..+..++.++++.++|+..|+++|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 235 FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3688899999887766554444344444556666777776 345788889999999999999999974
No 13
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.92 E-value=0.0092 Score=58.65 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=49.8
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+.++++.+|.+.+..++..+.-.........+.++ .|.+. +.+..++.++.+.+|++..|+++||++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 319 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR 319 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 46788999999877666543323334455555555 35543 4566788999999999999999999975543
No 14
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=96.79 E-value=0.01 Score=58.02 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=52.6
Q ss_pred hhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh--CCC--chhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 211 AFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL--GVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 211 ~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al--~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.++++.+|...++++|..+.-..+......+.+++ +.+ .+..+.++..+++.+||+..|+++||+++|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~ 311 (412)
T TIGR02332 238 EIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH 311 (412)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH
Confidence 35568899998888876655444566777777775 333 23456788899999999999999999987653
No 15
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=96.46 E-value=0.057 Score=53.09 Aligned_cols=72 Identities=13% Similarity=-0.064 Sum_probs=48.7
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.+.+++++||...+..++................+. +|++. .........++..+|++..|+++||++||+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 323 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL 323 (485)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH
Confidence 467788888887666554433322233344445554 46553 3456777888999999999999999998754
No 16
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.43 E-value=0.0088 Score=56.64 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=53.1
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
.++.+|++.+|.+.+.+++..+.-..+......+.++.|.+. .....++..++..+||+..|+++||+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~ 263 (355)
T TIGR00896 190 PVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQR 263 (355)
T ss_pred CchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Confidence 456788899998777666554444444555666777777653 356888999999999999999999995443
No 17
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.15 E-value=0.012 Score=55.39 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=57.5
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
..++.++++++|.+.+.+++..+....+.+......++ ++.++ ...+.++..+.+.+||+..|+++||++||+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~ 294 (366)
T TIGR00886 217 DQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL 294 (366)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH
Confidence 45678899999999988888777665555556666654 46553 34577888899999999999999999987653
No 18
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=96.02 E-value=0.025 Score=52.51 Aligned_cols=73 Identities=22% Similarity=0.311 Sum_probs=46.2
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHH-HHHhCCC-ch--hHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI-GVALGVN-DT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i-~~al~~~-~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+++..+++.+|.+++.+++....-.........+ .+.++.+ .. ....++.++.+.++++..|.++||+++++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 275 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR 275 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 4567777788855555544432222233333333 3455665 22 345788888889999999999999987654
No 19
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=95.87 E-value=0.023 Score=56.08 Aligned_cols=74 Identities=27% Similarity=0.334 Sum_probs=61.5
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh-CCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
..+...+++|-|.+-+.|+...|+=.-+.+-.++..++. |.++ +.....+....+.+-|...|++|||++.+|.
T Consensus 210 ~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv 286 (417)
T COG2223 210 QLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV 286 (417)
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH
Confidence 456677899999999999999998777888888888765 5543 3478999999999999999999999987654
No 20
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=95.85 E-value=0.026 Score=55.86 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=47.5
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHH--HHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG--VALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~--~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-.++++-.|++-++.++.--.=. -|+.=+++. |..+++ ++...++++=++...|-++.|++|||+-+.+..+-
T Consensus 247 YVL~Nk~iW~la~a~vfvYivR~-gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~ 323 (448)
T COG2271 247 YVLKNKLIWLLALANVFVYVVRY-GINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPM 323 (448)
T ss_pred HHHcChHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchH
Confidence 35778888888776544221111 123333443 334555 45678999999999999999999999965444343
No 21
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.80 E-value=0.02 Score=55.55 Aligned_cols=73 Identities=23% Similarity=0.284 Sum_probs=53.3
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.+.++++++|.+.+.+++....-....+-...+.+++|.+. .....++.++++.+||+..|+++||++||+..
T Consensus 199 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~ 273 (393)
T PRK09705 199 VRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL 273 (393)
T ss_pred cccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH
Confidence 45667888998877666554433334445666666666653 45688999999999999999999999987553
No 22
>PRK09528 lacY galactoside permease; Reviewed
Probab=95.74 E-value=0.018 Score=56.07 Aligned_cols=74 Identities=12% Similarity=0.072 Sum_probs=53.8
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+..++++||.+++.+++...+--.+..-.....+ ++|.+. ..+..++..+...++++.+|.++||++||+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~ 81 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW 81 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 4667889999988777766533233333333333 367663 4578999999999999999999999999887544
No 23
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.70 E-value=0.059 Score=54.76 Aligned_cols=94 Identities=14% Similarity=0.078 Sum_probs=66.7
Q ss_pred CCHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 206 FKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 206 ~t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
..++|+++++..|.+.+..+|....--..-+-+..+-.+ .++++ +..+...+.+++.+|=++.|++|||+... .-.
T Consensus 264 ~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~-~~~ 342 (495)
T KOG2533|consen 264 KGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTI-FAR 342 (495)
T ss_pred HHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhh-HHH
Confidence 367999999999999999998877766555666666666 33543 34577788899999999999999998611 122
Q ss_pred H-HHHHHHHHHHHHHHHHH
Q 021096 283 S-YLRSIKLGRKCKCFLVL 300 (317)
Q Consensus 283 r-~~~~~~~~~~~~~~~~~ 300 (317)
| .+...+.+.+.+++..+
T Consensus 343 ~~~~~~~~~~~~~~g~~~l 361 (495)
T KOG2533|consen 343 RLLFIVFLCLYAIIGAISL 361 (495)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 2 34444555666675555
No 24
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=95.64 E-value=0.027 Score=54.33 Aligned_cols=70 Identities=16% Similarity=0.122 Sum_probs=49.9
Q ss_pred hhhHHHHHHHHHHhhcc-hhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 214 KADFWLLWFVYFLGVGA-GVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 214 t~~Fw~l~~~~~~~~g~-Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+++||.+....++..++ +.....-...+.+.+|.+. ..+.+++.++...++++.+|+++||++||+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~ 73 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLW 73 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 47899987655554443 4443322233344567763 4568999999999999999999999999987655
No 25
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=95.23 E-value=0.052 Score=52.61 Aligned_cols=74 Identities=12% Similarity=0.028 Sum_probs=52.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+++.++++.+|.+.+..++....-.....-...+.+++|.+. .....++..+++.+|++..|+++||++||+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 346788899998887766654433333334444556667653 33566778899999999999999999987653
No 26
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=95.16 E-value=0.039 Score=51.92 Aligned_cols=68 Identities=19% Similarity=0.284 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhhcchhheecchHH-HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQ-IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~-i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.||..++.+++......++..-..+ +.++++.++ ..+..++..+...++.+.+|.++||++||+.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 5888888888776666665555554 777888864 3567889999999999999999999999876544
No 27
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=95.03 E-value=0.95 Score=45.38 Aligned_cols=72 Identities=11% Similarity=-0.069 Sum_probs=44.6
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.+.+|++.|+...+..++...+-...........|. .|++ ++.......+++..+|.+..|.+.||+++|+.
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~ 327 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLV 327 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 456677777766665544333211112222333333 4655 34456677888999999999999999998653
No 28
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=94.98 E-value=0.032 Score=54.24 Aligned_cols=68 Identities=10% Similarity=0.071 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHhhcch---hheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAG---VTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~G---l~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++|.++...++....+ .+....+.++.+++|.+. ....+++..+...++++..|.++||++||+.+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~ 90 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVIL 90 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHH
Confidence 4444555554433333 334446777888888764 4568889999999999999999999999976544
No 29
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.84 E-value=0.5 Score=47.92 Aligned_cols=77 Identities=16% Similarity=0.102 Sum_probs=56.9
Q ss_pred CCCCHHhhhhhh----hHHHHHHHHHHhhcchhheec-chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhh
Q 021096 204 EDFKLGEAFVKA----DFWLLWFVYFLGVGAGVTVLN-NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYV 276 (317)
Q Consensus 204 ~d~t~~~~l~t~----~Fw~l~~~~~~~~g~Gl~~i~-n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~ 276 (317)
++.+++|.++++ ..++.....++..-+|...++ ....|-++.|.+. +.......++.|....+.+.++-||+|
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g 333 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG 333 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356888888863 456666677777888877554 4555667777763 345666788899999999999999999
Q ss_pred hhhh
Q 021096 277 RSLL 280 (317)
Q Consensus 277 r~~~ 280 (317)
||.-
T Consensus 334 RRpL 337 (485)
T KOG0569|consen 334 RRPL 337 (485)
T ss_pred CcHH
Confidence 8753
No 30
>PRK03633 putative MFS family transporter protein; Provisional
Probab=94.77 E-value=0.074 Score=51.05 Aligned_cols=70 Identities=10% Similarity=-0.031 Sum_probs=52.0
Q ss_pred hhhhHHHHHHHHHHhhcchhh-eecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 213 VKADFWLLWFVYFLGVGAGVT-VLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 213 ~t~~Fw~l~~~~~~~~g~Gl~-~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++++|++++..++.. .+.. +..-+..+.++++.++ ..+..+...+++.++.+.+|.++||++||+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~ 76 (381)
T PRK03633 4 YTRPVLLLLCGLLLLT-LAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYL 76 (381)
T ss_pred HHHHHHHHHHHHHHHH-HhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3567888887665533 3333 3345666777777763 4578889999999999999999999999887555
No 31
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=94.48 E-value=0.47 Score=47.56 Aligned_cols=30 Identities=13% Similarity=-0.015 Sum_probs=22.9
Q ss_pred HHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 254 LCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 254 vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..+..+++..|.++.|+++||++||+.+..
T Consensus 341 ~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~ 370 (502)
T TIGR00887 341 LIIALAGTVPGYWVTVFLVDIIGRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcchhHHHH
Confidence 344455677799999999999999876544
No 32
>PRK03545 putative arabinose transporter; Provisional
Probab=94.33 E-value=0.09 Score=50.55 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=50.6
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
.++.+|++.+|..++..++.........+....+.++ .|.+. .....+++++.+.+|++..|.++||.+||.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 272 (390)
T PRK03545 198 LPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF 272 (390)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 4678899999887776655444443333334444454 45543 456778899999999999999999998764
No 33
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=94.19 E-value=0.17 Score=47.50 Aligned_cols=75 Identities=21% Similarity=0.136 Sum_probs=49.6
Q ss_pred CHHhhhhhhh--HHHHHHHHHHhhcchhheecchHHHH-HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKAD--FWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~--Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+.++.+++.. +|...+..++..............+. +.++.++ .....++..+.+.++++..|+++||++||+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 288 (394)
T TIGR00883 209 PIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL 288 (394)
T ss_pred CHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 3456666655 77666665554444333344455555 3455543 34567788899999999999999999988653
No 34
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=94.16 E-value=0.072 Score=52.13 Aligned_cols=54 Identities=13% Similarity=0.099 Sum_probs=43.3
Q ss_pred chhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 230 AGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 230 ~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.-++.-.+.+|.++++.+. ....++++.++.++|.+.+|.++||++||+.+..
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 86 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLIT 86 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHH
Confidence 44456667778888888763 4568899999999999999999999999976443
No 35
>PRK10504 putative transporter; Provisional
Probab=94.01 E-value=0.13 Score=50.70 Aligned_cols=68 Identities=16% Similarity=0.222 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+.+|++++.+++......++......+.+++|.+.. ...++...+...++.+.+|.++|+++||+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 468999888887666555666678888888888743 45667778888999999999999999986543
No 36
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=93.85 E-value=0.16 Score=48.81 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 217 FWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 217 Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.|++.+...++.....++.....++.++++.+. .....++..+...++.+.+|.++||++||+.+..
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~ 78 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILV 78 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 344444555555544555666778888888864 3567889999999999999999999999876544
No 37
>PRK03699 putative transporter; Provisional
Probab=93.79 E-value=0.14 Score=49.47 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHH-HhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+.+|++.+.+++.......+.+-...+.+ .+|.+ +.....+++.+++.+||+..|+++||+++|+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILT 275 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH
Confidence 46788777776655443334444555664 45665 3456788899999999999999999999876543
No 38
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=93.70 E-value=0.19 Score=47.43 Aligned_cols=69 Identities=28% Similarity=0.245 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHhhcchh-heecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 215 ADFWLLWFVYFLGVGAGV-TVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl-~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++.....+.+..+.+. ++......+.+++|.++ .....++..+++.++.+.+|.++||++||+.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 75 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL 75 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence 344444444444444443 34445667788888864 3567889999999999999999999999876444
No 39
>PRK10091 MFS transport protein AraJ; Provisional
Probab=93.69 E-value=0.17 Score=48.64 Aligned_cols=74 Identities=19% Similarity=0.231 Sum_probs=49.6
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.+.+++..+|.++...+++...-....+......+ ..|.++ ...+.++.++++.+||+..|+++||+++++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 193 FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAA 269 (382)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHH
Confidence 34677888898877666544322222222333333 356653 456788999999999999999999999876543
No 40
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=93.36 E-value=0.18 Score=49.49 Aligned_cols=74 Identities=15% Similarity=0.024 Sum_probs=53.9
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCC--c--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN--D--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~--~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
..+.+|++.+|...+..++..|......+++....++.+.. + +..+.++.-..-.+||+++|++.||+++|+.+
T Consensus 225 ~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l 302 (410)
T TIGR00885 225 LSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL 302 (410)
T ss_pred HHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 35678888999988888888888766667777777665322 2 13345555567789999999999999887653
No 41
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=93.32 E-value=0.18 Score=53.83 Aligned_cols=72 Identities=25% Similarity=0.171 Sum_probs=46.9
Q ss_pred hhhhhHHHHHHHHHHhhcch---hheecc-hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 212 FVKADFWLLWFVYFLGVGAG---VTVLNN-LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 212 l~t~~Fw~l~~~~~~~~g~G---l~~i~n-~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-.++..|.+++.+.++.... ...++. +..+.++++.+. ..++.++..++..+|.+++|+++|++|||+.+..
T Consensus 160 ~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii 237 (742)
T TIGR01299 160 GHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLI 237 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34566676665544433222 122222 233445666653 3567888999999999999999999999977554
No 42
>PRK12307 putative sialic acid transporter; Provisional
Probab=93.27 E-value=0.21 Score=48.34 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=52.0
Q ss_pred CHHhhhhhhhHHHHHHHHH---HhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYF---LGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~---~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.+++.++++.+|.....+. +..+....+.+......++.|++. .....++..+++.+|++.+|+++||++||+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 4678888888886554332 222322233445555666666653 34567788899999999999999999988654
Q ss_pred HH
Q 021096 282 CS 283 (317)
Q Consensus 282 ~r 283 (317)
..
T Consensus 300 ~~ 301 (426)
T PRK12307 300 SI 301 (426)
T ss_pred HH
Confidence 33
No 43
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=93.20 E-value=0.25 Score=46.63 Aligned_cols=73 Identities=19% Similarity=0.137 Sum_probs=57.3
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH---hCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA---LGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a---l~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
..++++.+|+..+.+++-.|+...+.+......++ ++.+ ......+.+..+-.+||++.+.++||+++++.+.
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~ 212 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA 212 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 46778899999999999998887766666665543 3554 3467889999999999999999999999776543
No 44
>PRK03699 putative transporter; Provisional
Probab=93.17 E-value=0.2 Score=48.35 Aligned_cols=69 Identities=10% Similarity=0.024 Sum_probs=51.1
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+-+|..++.+++..+.-.+.-....++.++++.+. .....++..++..+|.+..|.++||++||+.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~ 77 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIF 77 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34666666666655554444445677888888764 3567888899999999999999999999976544
No 45
>PRK12382 putative transporter; Provisional
Probab=93.15 E-value=0.19 Score=48.21 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=50.0
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchH-HHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLA-QIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~-~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+...+..+|.+++..++..-+.-+...-+. .+.+++|.+. ..+.+++..+...++.+.+|.++||++||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (392)
T PRK12382 10 RSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ 86 (392)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH
Confidence 345556777776655444332222222233 2456777763 4578899999999999999999999999887554
No 46
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=93.12 E-value=0.21 Score=49.48 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhhcchhheecc----hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNN----LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n----~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+|..|...+++...-.+.-+| ...+.++++.++ ..+..+.+.+..+++.+..|+++||+++|+.+..
T Consensus 26 ~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 99 (467)
T PRK09556 26 PFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPF 99 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHH
Confidence 4666666555544433222222 445667777764 3567888999999999999999999999987655
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=93.06 E-value=0.27 Score=47.01 Aligned_cols=70 Identities=21% Similarity=0.186 Sum_probs=48.9
Q ss_pred hhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch-------hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 214 KADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT-------TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 214 t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~-------~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+++++.+|+..++..-+.-++.--+..+.+++|.++. ....++..+...++.+.+|.++||++||+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 89 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLR 89 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHH
Confidence 3467777776655433333444456777778777532 345677788899999999999999999877555
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=93.04 E-value=0.13 Score=47.68 Aligned_cols=67 Identities=15% Similarity=0.036 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 217 FWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 217 Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
||.++...++.....-+.......+..+++.++ ..+..++..+...++.+.+|.++||++||+.+..
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~ 69 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIG 69 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHH
Confidence 354554444433333333333444555666553 3567888889999999999999999999876444
No 49
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=93.00 E-value=0.23 Score=46.85 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=50.6
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.++.++++.+|.+.+.+.+..+...........+.+ .++.++ .....+...+...+|++..|+++||+++|+.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 199 FLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR 276 (385)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 456778888888776655544433333333344444 456553 345677788899999999999999999876543
No 50
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=92.97 E-value=0.22 Score=50.16 Aligned_cols=74 Identities=15% Similarity=0.217 Sum_probs=51.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
..+.+|+++-|++-+.++|..|.=.-..+-.....++ .+++. .....+.++...++|.+.|+++||+++++...
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~ 320 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTL 320 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHH
Confidence 4678999999999998888776543333344444444 22222 22345567889999999999999999886543
No 51
>PRK10091 MFS transport protein AraJ; Provisional
Probab=92.86 E-value=0.19 Score=48.31 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.+|.+.+..++......++..-+..+.+++|.+. ....++...+++.+|.+..|.++||++||+.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 45677766655555555566666777888888763 4578999999999999999999999999876544
No 52
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=92.82 E-value=0.27 Score=47.38 Aligned_cols=69 Identities=10% Similarity=-0.002 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHhhc----chhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 215 ADFWLLWFVYFLGVG----AGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g----~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++|++.+.+.+... ..-++.-...++.++++.+. .....+...+...++.+..|.++||++||+.+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~ 83 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLA 83 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 456666655544443 23334445667788888764 3467788999999999999999999999876444
No 53
>PRK09528 lacY galactoside permease; Reviewed
Probab=92.79 E-value=0.35 Score=47.03 Aligned_cols=74 Identities=7% Similarity=-0.106 Sum_probs=44.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh----CCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL----GVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al----~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.++.+|++.+|.+.+.+.+....-.+..........+. +.+. .....++..+.+.+|.+.+|+++||+++|+.+
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh
Confidence 34577788888766544333322212222222322222 2221 23566777888999999999999999998753
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=92.65 E-value=0.23 Score=49.18 Aligned_cols=76 Identities=18% Similarity=0.206 Sum_probs=51.2
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHH-HH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI-GV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i-~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++.+++++||...+..++..+.-....+-.... .+ .+|.++ .....+...++..+||+..|.+.||+++|+....
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~ 330 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAA 330 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3567889999987766655554432222222222 23 346553 4567889999999999999999999998876433
No 55
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=92.62 E-value=0.33 Score=46.64 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 217 FWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 217 Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.|.++..+++....-..+.+....+.++.|.++ .....++.++++.+|++..|+++||++||+.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 289 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVL 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 344444444443333344445666677777653 456778888999999999999999999876543
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=92.61 E-value=0.38 Score=46.07 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=47.6
Q ss_pred CHHhhhhhhhHHHHHHHHHH-hhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 207 KLGEAFVKADFWLLWFVYFL-GVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~-~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+.++.++++.+|.....+++ +...+..+ +-+....+..|.+. ....+++..+++.+||+..|+++||+++|+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~ 269 (381)
T PRK03633 192 SIWPMLKLRQARLGVNGCIISGIVLGSLY-GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLR 269 (381)
T ss_pred CHHHHHHhcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHH
Confidence 34667888888865442222 11112111 22344445556653 346788888999999999999999999886543
No 57
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=92.53 E-value=0.21 Score=50.38 Aligned_cols=97 Identities=21% Similarity=0.240 Sum_probs=67.3
Q ss_pred CCCCHHhhhhhhhHHHHHHHHHHhhcchhheecchHHH-HHHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhh--
Q 021096 204 EDFKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI-GVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRS-- 278 (317)
Q Consensus 204 ~d~t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i-~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~-- 278 (317)
.+..++++++++.+|.+|+..++..-+=.++....... -+-++++ +...+.++=-+...+-++++|.++|++.+|
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~l 326 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRIL 326 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 46688999999999999998877554443333333333 3346775 456777888888999999999999999885
Q ss_pred -hhHHH-HHHHHHHHHHHHHHHHH
Q 021096 279 -LLLCS-YLRSIKLGRKCKCFLVL 300 (317)
Q Consensus 279 -~~~~r-~~~~~~~~~~~~~~~~~ 300 (317)
.+..| .+-+++.+..+++.+++
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l 350 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVL 350 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHee
Confidence 11233 55566666666665555
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=92.49 E-value=0.25 Score=47.94 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=51.4
Q ss_pred hhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 214 KADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 214 t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+++||.+++..++..-...++...+..+.++++.++ ....++...+...++-+..|.++||++||+.+-.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~ 73 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFI 73 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHH
Confidence 458999988877755444344444555667777654 3456778888899999999999999999987544
No 59
>PRK03893 putative sialic acid transporter; Provisional
Probab=92.43 E-value=0.3 Score=48.34 Aligned_cols=68 Identities=21% Similarity=0.316 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++.+++.+++..-...+.......+.++++.+. ....+++..+...+|.+..|.++||++||+.+..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 4555555554433333333334566777787764 4568888899999999999999999999876444
No 60
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=92.38 E-value=1.2 Score=42.16 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=31.9
Q ss_pred HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 243 VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 243 ~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.+|.+. .....++..++..+|++..|+++||++||+.+..
T Consensus 267 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~ 309 (405)
T TIGR00891 267 ADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVC 309 (405)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHH
Confidence 3456653 3457788899999999999999999999876443
No 61
>PRK10054 putative transporter; Provisional
Probab=92.36 E-value=0.28 Score=47.65 Aligned_cols=69 Identities=10% Similarity=0.020 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHhhcchhheecchHH-HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQ-IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~-i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+++|.+.+..++....--++..=+.. +.+.+|.+. ..+.+++..+...++++..|.++||++||+.+..
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~ 78 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLL 78 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH
Confidence 36888888666654333333333333 345577764 4567788888899999999999999999875433
No 62
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=92.34 E-value=0.39 Score=46.15 Aligned_cols=74 Identities=15% Similarity=-0.081 Sum_probs=52.3
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+.++.+|+++||.+.+..++..++-..+........+++|.++. ....++..+...++.+.+|.+.||+++|+.
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~ 272 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL 272 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH
Confidence 45789999999999888877666655666677776777777643 345556666677777777766677666543
No 63
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=92.34 E-value=0.23 Score=46.29 Aligned_cols=47 Identities=13% Similarity=0.111 Sum_probs=38.2
Q ss_pred chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-...+.++++.++ .....++..++..++.+.+|.++||++||+.+..
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~ 73 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAML 73 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHH
Confidence 3456667777764 4578899999999999999999999999987544
No 64
>PRK03545 putative arabinose transporter; Provisional
Probab=92.11 E-value=0.22 Score=47.83 Aligned_cols=46 Identities=17% Similarity=0.194 Sum_probs=37.6
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++.++++.+. ....+++..+...++.+.+|.++||++||+.+..
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 79 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIG 79 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 578888888764 3567888888899999999999999999976444
No 65
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=92.00 E-value=0.27 Score=48.08 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=33.6
Q ss_pred HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 241 IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 241 i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.++++.++ ..+..+++.++.++|.+..|+++||++||+.+..
T Consensus 34 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 34 MGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 345556553 3568889999999999999999999999876443
No 66
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=91.92 E-value=0.37 Score=48.34 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHhhcchhheecchHHHHHH---hCCC--chhHHHHHHHhhhcccccccchhhhh-hhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQIGVA---LGVN--DTTELLCLFSLCNFAGRLGSGVLSEH-YVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a---l~~~--~~~~~vsl~si~n~~GRl~~G~~SD~-~~r~~~~~r 283 (317)
.+|.++...++-..+-..+..++....++ +|.+ ++...++.+++.+.++.+.+|+++|| ++||+.+..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 46777766666333333344455555544 5665 34678899999999999999999999 799887544
No 67
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=91.77 E-value=0.38 Score=50.03 Aligned_cols=69 Identities=19% Similarity=0.189 Sum_probs=47.9
Q ss_pred hhhhHHHHHHHHHHhhcch---hhee-cchHHHHHHhCCCc-hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 213 VKADFWLLWFVYFLGVGAG---VTVL-NNLAQIGVALGVND-TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 213 ~t~~Fw~l~~~~~~~~g~G---l~~i-~n~~~i~~al~~~~-~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+++.|+..+..+.+..-+. +..- +-+.+|.+++|.++ .+++++..++.++.+-...|-+||.+|||+-.
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~ 111 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF 111 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Confidence 4456666665444433322 2222 22578899998864 45777888899999999999999999998653
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=91.70 E-value=0.23 Score=48.74 Aligned_cols=76 Identities=9% Similarity=-0.049 Sum_probs=50.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCC----------chhHHHHHHHhhhcccccccchhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN----------DTTELLCLFSLCNFAGRLGSGVLSEHYVR 277 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~----------~~~~~vsl~si~n~~GRl~~G~~SD~~~r 277 (317)
..+.+|++.||.+++..++..+.-..+........++.|++ ......++.++....+++..|.++||+++
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 45688899999888776665332211112222223344432 23567888888999999999999999999
Q ss_pred hhhHHH
Q 021096 278 SLLLCS 283 (317)
Q Consensus 278 ~~~~~r 283 (317)
|+.+..
T Consensus 281 r~~l~~ 286 (418)
T TIGR00889 281 KKVMLL 286 (418)
T ss_pred HHHHHH
Confidence 876433
No 69
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=91.52 E-value=0.41 Score=46.38 Aligned_cols=69 Identities=19% Similarity=0.179 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 214 KADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 214 t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+...|.+...+.+..+.+.. .+-...+.++++.++ ..+.+++..++..++.+..|.+.||++||+.+..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~ 83 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLE-QGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMI 83 (402)
T ss_pred chhhHHHHHHHHHHHhhhhH-HHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 33445444555555555533 334455667887763 4568899999999999999999999999887554
No 70
>PRK11663 regulatory protein UhpC; Provisional
Probab=91.50 E-value=0.46 Score=46.60 Aligned_cols=68 Identities=15% Similarity=0.150 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-+|.+++.+++.......+-..+.++.+++|.+. ..+..++..+...++++..|+++||++||+.+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~ 93 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGI 93 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHH
Confidence 3344444444433322233334566777777763 3567888999999999999999999999876444
No 71
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=91.44 E-value=0.36 Score=44.27 Aligned_cols=66 Identities=26% Similarity=0.318 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 218 WLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 218 w~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
|.+....++......+.......+.++++.+. .....++..+.+.++.+.+|.++||++||+.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~ 69 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLL 69 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHH
Confidence 44444444333333333344555566666653 3567888889999999999999999999875433
No 72
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=91.38 E-value=0.64 Score=43.67 Aligned_cols=72 Identities=18% Similarity=0.184 Sum_probs=45.9
Q ss_pred hhhhhhhHHHHHHHHHHhhcchhheecchHHHH-HHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 210 EAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 210 ~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+.++++++|.++...++..+....+........ +.+|.++. ....++..+.+..+++..|.++||++||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~ 268 (375)
T TIGR00899 194 GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM 268 (375)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH
Confidence 456777888877766555543333333333333 44566532 3455566667788999999999999988653
No 73
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=91.24 E-value=0.67 Score=45.38 Aligned_cols=75 Identities=8% Similarity=0.037 Sum_probs=49.6
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhh-eecchHHHH-HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVT-VLNNLAQIG-VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~-~i~n~~~i~-~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
++++.++++.+|.+.+.+.+....+.. +..-..++. +.+|.+. .....++..+...++....|+++||++||+..
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~ 312 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM 312 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 467888899999877665554333322 223344444 3456653 34566677778888999999999999988653
No 74
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=91.07 E-value=0.59 Score=44.74 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=49.1
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHH-HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
++.++++.+|...+...+.......+.+-...+. +.+|.++ .....++.++.+.+|++..|+++||++||+.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~ 273 (392)
T PRK10473 197 SESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLML 273 (392)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 4677888888776665554444333333222333 3456653 345677888899999999999999999876543
No 75
>TIGR00895 2A0115 benzoate transport.
Probab=91.00 E-value=0.58 Score=43.95 Aligned_cols=64 Identities=23% Similarity=0.280 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhh
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~ 278 (317)
+.+|.+++.+++.......+.+....+.+.++.+. .....++.++++.+|++..|+++||++||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 34555555554443333223333345555666653 35678888999999999999999999987
No 76
>TIGR00901 2A0125 AmpG-related permease.
Probab=90.99 E-value=0.57 Score=44.15 Aligned_cols=76 Identities=14% Similarity=0.095 Sum_probs=45.9
Q ss_pred HHhhhhhhh---HHHHHHHHHHhhcchhheecchHHHHHHhCCCchh--HHHHHHH-hhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKAD---FWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDTT--ELLCLFS-LCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~---Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~~--~~vsl~s-i~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+++.++++. +|.+.+..++...+............+++|.+... ...++.+ +...+|.+++|+++||++||+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l 278 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL 278 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 345555554 66666555444333223334445555667766432 3444444 56789999999999999988774
Q ss_pred HH
Q 021096 282 CS 283 (317)
Q Consensus 282 ~r 283 (317)
..
T Consensus 279 ~~ 280 (356)
T TIGR00901 279 LL 280 (356)
T ss_pred HH
Confidence 43
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=90.94 E-value=0.29 Score=47.46 Aligned_cols=72 Identities=18% Similarity=0.180 Sum_probs=48.1
Q ss_pred hhhhhhHHHHHHHHHH-hhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 211 AFVKADFWLLWFVYFL-GVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 211 ~l~t~~Fw~l~~~~~~-~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++++|+.+++..++ ..+.+.. .--...+.++++.+. ..+..+...+...++.+..|.++||++||+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 13 LKTHPAFRAVFIARFISIFGLGLL-GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 3457788877765433 3333333 223344556666553 3567888899999999999999999999876443
No 78
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=90.94 E-value=0.86 Score=45.96 Aligned_cols=70 Identities=9% Similarity=0.034 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 214 KADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 214 t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++.+|+-++.+..+...=.+.---..++.+ +++.+. ..+++++..+..+++|+..|.+.||+|.|+....
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 346777776665544333322222333444 566653 4568889999999999999999999998876444
No 79
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=90.89 E-value=0.6 Score=44.83 Aligned_cols=47 Identities=21% Similarity=0.127 Sum_probs=35.1
Q ss_pred chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-...+.+..|++. ......+..+++.+|+++.|+++||++||+.+..
T Consensus 306 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 354 (481)
T TIGR00879 306 YSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI 354 (481)
T ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 3444556667654 3457778889999999999999999998876443
No 80
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=90.70 E-value=0.63 Score=42.65 Aligned_cols=65 Identities=28% Similarity=0.289 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHh-CCCc--hhHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
+.+|.+++..++.......+......+.++. +.++ .....++..+.+.+|++.+|.++||++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 242 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR 242 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6777777777777666666666666676665 5543 346778888999999999999999999987
No 81
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=90.67 E-value=0.62 Score=44.06 Aligned_cols=47 Identities=21% Similarity=0.387 Sum_probs=36.9
Q ss_pred chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
...++.++++.++ .....++..++..++-+..|.++||++||+.+..
T Consensus 34 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 34 VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3345666777763 3567888999999999999999999999876544
No 82
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=90.51 E-value=0.75 Score=42.63 Aligned_cols=74 Identities=19% Similarity=0.143 Sum_probs=50.7
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHH-HHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI-GVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i-~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.++.++++.+|.+.+..++..........+..+. .+. ++.++ .....++.++++.+|++..|.++|+.+|++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 280 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM 280 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH
Confidence 4667888899988877666555554444233333 333 45553 34567778889999999999999998877543
No 83
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=90.51 E-value=0.63 Score=43.99 Aligned_cols=76 Identities=9% Similarity=-0.036 Sum_probs=50.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++.++++.+|...+..++..+.-..+........+ ..|.+. .....++.++...+|++..|++.||++||+.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 265 (377)
T PRK11102 187 FASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRF 265 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345677778887666555444333333333333443 346553 3467788889999999999999999998876443
No 84
>PRK15075 citrate-proton symporter; Provisional
Probab=90.41 E-value=0.85 Score=44.68 Aligned_cols=69 Identities=13% Similarity=0.062 Sum_probs=42.8
Q ss_pred hhhhhHHHHHHHHHHhhcchhheecc-hHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 212 FVKADFWLLWFVYFLGVGAGVTVLNN-LAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 212 l~t~~Fw~l~~~~~~~~g~Gl~~i~n-~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.+++..|.+.....+....+...+.+ ...+.+. +|.+. ......+.++++.+|++..|+++||++||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~ 306 (434)
T PRK15075 234 AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV 306 (434)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 44455555433333333333333333 5555554 56653 2345667888999999999999999998764
No 85
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=90.24 E-value=0.6 Score=46.65 Aligned_cols=46 Identities=15% Similarity=0.037 Sum_probs=34.9
Q ss_pred hHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
...+.+++|.+.. ....+...++..+|.+..|+++||++||+.+..
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~ 106 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAF 106 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3456677777643 345667778889999999999999999876555
No 86
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=90.22 E-value=0.74 Score=44.17 Aligned_cols=74 Identities=15% Similarity=0.005 Sum_probs=48.3
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
++++.+|++.+|.+.+..++....-..+.+......++.|.++ ...+.++..+.+..+++..|.+.||+++++.
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~ 272 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL 272 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 5688999999998877655544332223333344446667653 3445566667778888888888888777665
No 87
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=89.91 E-value=0.94 Score=43.83 Aligned_cols=69 Identities=20% Similarity=0.290 Sum_probs=46.6
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch-hHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT-TELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~-~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
+++.++++++|.+++.++|..+.-..+.+=+.++.++.|++.. ....++.. ..|-+..|+++|++.|++
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~---~~g~~g~~~~~d~~~r~~ 254 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAI---LAGLIGVAVIPDRVARAG 254 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHH---HHHHHHHHHhhHHhhhhh
Confidence 5688999999999998888766655554446677776666532 22333333 344455699999998753
No 88
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=89.84 E-value=0.5 Score=43.98 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=36.1
Q ss_pred HHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 239 AQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 239 ~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..+.+++|.+. .....++..+...++.+..|+++||++||+.+..
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 65 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPI 65 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHH
Confidence 45566777763 4568889999999999999999999999876444
No 89
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.73 E-value=0.69 Score=44.29 Aligned_cols=88 Identities=16% Similarity=0.056 Sum_probs=53.6
Q ss_pred hhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHHHHHHHHH
Q 021096 214 KADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSYLRSIKL 290 (317)
Q Consensus 214 t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~~~~~~~ 290 (317)
.+.||+++++++|---+=.-.|.--....+ .+|.+. +...-|.+-.-++.---.+|.++|+.|++.+ ....+.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~----wv~~a~ 338 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW----WVASAC 338 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh----hHHHHH
Confidence 368999999888765444444433222333 346653 2223333334455556678999999999865 334455
Q ss_pred HHHHHHHHHHHHhhc
Q 021096 291 GRKCKCFLVLFEKFQ 305 (317)
Q Consensus 291 ~~~~~~~~~~~~~~~ 305 (317)
.++..+|..||-+|-
T Consensus 339 ~~tl~~H~~l~Ft~l 353 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTFL 353 (459)
T ss_pred HHHHHHhhhHHhhhc
Confidence 667789988855543
No 90
>TIGR00898 2A0119 cation transport protein.
Probab=89.67 E-value=0.67 Score=46.05 Aligned_cols=77 Identities=13% Similarity=0.044 Sum_probs=47.6
Q ss_pred CCHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCchhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 206 FKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 206 ~t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+.++.++++.+|...+...+.+.......+......+.++.+ ......+.++....|+++.|+++||++||+.+..
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~ 390 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAA 390 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4788999999998887766554443222211111111222222 2233446677788899999999999999865433
No 91
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=89.65 E-value=0.49 Score=43.72 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=33.3
Q ss_pred HHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 240 QIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 240 ~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.+.++++.+. ..+..++..+.+.++.+..|.++||++||+.+
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l 65 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL 65 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE
Confidence 5666777653 45788889999999999999999999988753
No 92
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=89.61 E-value=0.88 Score=43.85 Aligned_cols=76 Identities=12% Similarity=-0.129 Sum_probs=48.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHH-HHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++.++++.+|.+.+.+++..............+. +.++.++. ........++..+|++..|.++||+++|+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~ 286 (406)
T PRK15402 208 YKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRM 286 (406)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 35678888999887766554433222222233333 34566532 233445566788999999999999998765433
No 93
>PRK11043 putative transporter; Provisional
Probab=89.59 E-value=0.98 Score=43.36 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=47.7
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
++++.++++++|...+.+.+..+.-..+.+-...+.++.|++.. ........++..+|++..+.+.||+++++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~ 271 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL 271 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 45678888899877666555443333333333444555666532 3344455677788899999999999877643
No 94
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=89.05 E-value=0.81 Score=50.32 Aligned_cols=75 Identities=15% Similarity=0.108 Sum_probs=49.0
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchH-HHHHHhCCCc----hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLA-QIGVALGVND----TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~-~i~~al~~~~----~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+.+++.+|+.+++..++..-...++..-+. .+...++.+. .++..+++.+...++.+.+|+++|+++||+.+..
T Consensus 3 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~ 82 (1146)
T PRK08633 3 KNLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRI 82 (1146)
T ss_pred cchhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHH
Confidence 3568888999998877775433322222121 2222333332 2456677888899999999999999999976554
No 95
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=88.95 E-value=0.93 Score=43.44 Aligned_cols=61 Identities=11% Similarity=0.106 Sum_probs=42.1
Q ss_pred HHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 223 VYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 223 ~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+....+.|+....--.++.+++|.++ ..+..++..+...++.+..|.++||++||+.+..
T Consensus 24 ~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (399)
T PRK05122 24 TFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF 86 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH
Confidence 333344444432222233556777664 3567888999999999999999999999988666
No 96
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=88.62 E-value=1.6 Score=43.11 Aligned_cols=73 Identities=16% Similarity=0.198 Sum_probs=61.4
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh-CCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+..+.+|++.-|..+++.++..+...+...-++++-++. |.+. .+...-+++++..+|-++.|.++|| +.++.
T Consensus 203 ~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~ 278 (394)
T COG2814 203 TLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRA 278 (394)
T ss_pred HHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhH
Confidence 458899999999999999999999999888888988876 4443 3566778999999999999999999 55444
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=88.55 E-value=1.1 Score=45.23 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=43.8
Q ss_pred hhhhhh-hHHHHHHHHHHhhcchhheecchHHHH-HHhCCCch--hHHHHHHHhhhcccccccchhhhh-hhhhhhHHH
Q 021096 210 EAFVKA-DFWLLWFVYFLGVGAGVTVLNNLAQIG-VALGVNDT--TELLCLFSLCNFAGRLGSGVLSEH-YVRSLLLCS 283 (317)
Q Consensus 210 ~~l~t~-~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~-~~r~~~~~r 283 (317)
+.++.+ .+|.++...++...+--.+...+.... +++|.++. ...++..........+.+|+++|| ++||+.+..
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~ 93 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML 93 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 344554 589888877765544323333333333 56777643 334444444444445688999999 599876544
No 98
>PRK12307 putative sialic acid transporter; Provisional
Probab=88.53 E-value=1.1 Score=43.17 Aligned_cols=47 Identities=21% Similarity=0.172 Sum_probs=36.9
Q ss_pred chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
....|.++++.++ .....++..++..+|.+.+|.++||++||+.+..
T Consensus 40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3445556777764 3567888899999999999999999999877555
No 99
>PRK11043 putative transporter; Provisional
Probab=88.50 E-value=0.9 Score=43.63 Aligned_cols=51 Identities=27% Similarity=0.280 Sum_probs=40.5
Q ss_pred heecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 233 TVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 233 ~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++.-...++.++++.++ .....++..+...+|.+.+|.++||++||+.+..
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 76 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLA 76 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHH
Confidence 34445667778887764 3568889999999999999999999999877544
No 100
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=88.44 E-value=0.59 Score=45.87 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=38.2
Q ss_pred cchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 236 NNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 236 ~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.....+.+++|.+. .....+...+++.++.+..|.++||++||+.+..
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 72 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLI 72 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHH
Confidence 34566777887753 4578889999999999999999999999876433
No 101
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=88.32 E-value=1 Score=43.12 Aligned_cols=77 Identities=16% Similarity=-0.026 Sum_probs=50.9
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCch--hHHHHHHH-hhhcccccccchhhhhhhhhhhHHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFS-LCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~--~~~vsl~s-i~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.++.+|++.+|.+....++...+......-.....+++|++.. .....+.. +...+|.+..|.+.||+++++....
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~ 279 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFIL 279 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 45788888888887776665544333333334455667777643 34444444 4667889999999999998866443
No 102
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=88.24 E-value=0.97 Score=43.24 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=40.2
Q ss_pred heecchHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 233 TVLNNLAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 233 ~~i~n~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++...+.++.++++.++. ....++..+...++.+..|+++||++||+.+-.
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 73 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIP 73 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHH
Confidence 445567788888888643 457788888999999999999999999865433
No 103
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=87.96 E-value=1.8 Score=42.67 Aligned_cols=38 Identities=16% Similarity=0.088 Sum_probs=31.3
Q ss_pred CCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 246 GVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 246 ~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.+. ..+..+...++..+|.+.+|+++||++||+.+..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~ 98 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPA 98 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHH
Confidence 5543 3567889999999999999999999999876544
No 104
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=87.85 E-value=1.2 Score=44.12 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=35.3
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++.++++.+. .....++..+...++...+|+++||++||+.+-.
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~ 89 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIA 89 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHh
Confidence 556667777753 3566777778888999999999999999876444
No 105
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=87.37 E-value=1.3 Score=43.09 Aligned_cols=43 Identities=12% Similarity=0.096 Sum_probs=31.9
Q ss_pred HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 241 IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 241 i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.+.+|.+. ..+..++..+...+.++..|.++||++||+.+..
T Consensus 37 ~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~ 81 (400)
T PRK11646 37 FVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVT 81 (400)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHH
Confidence 345667663 3456777778888889999999999999876444
No 106
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=87.27 E-value=2 Score=41.15 Aligned_cols=40 Identities=23% Similarity=0.140 Sum_probs=30.5
Q ss_pred HHHhCCCchhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 242 GVALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 242 ~~al~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.++.+........+++.++..+||+..|.++||+++|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 282 (399)
T PRK05122 243 YAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVA 282 (399)
T ss_pred HHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3444544445667788899999999999999999887543
No 107
>TIGR00895 2A0115 benzoate transport.
Probab=87.18 E-value=1.4 Score=41.29 Aligned_cols=47 Identities=19% Similarity=0.090 Sum_probs=35.8
Q ss_pred chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
....+.+.++.+. .....++..++..+|.+..|.++||++||+.+..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 87 (398)
T TIGR00895 39 AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLW 87 (398)
T ss_pred hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH
Confidence 3455666677653 3457778888999999999999999998876544
No 108
>PRK10133 L-fucose transporter; Provisional
Probab=86.51 E-value=1.5 Score=43.45 Aligned_cols=68 Identities=19% Similarity=0.153 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.|+.++++++...-.-.+...-..++.++++.++ ..+..+.+.++..++-+..|.++||++||+.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~ 96 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIIT 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 5666666665433333333444556666777764 3567888999999999999999999999976544
No 109
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=86.13 E-value=2.2 Score=41.30 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=45.2
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHH-HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQ-IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYV 276 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~-i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~ 276 (317)
.++.++++.+|.+.+..++..+..........+ +.+.+|.+. .....+..++++.+|++..|.+.||..
T Consensus 209 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~ 280 (394)
T PRK10213 209 TFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV 280 (394)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467889999999877655544433222233333 344567653 345677788889999998888888843
No 110
>TIGR00893 2A0114 d-galactonate transporter.
Probab=85.60 E-value=0.69 Score=43.03 Aligned_cols=46 Identities=17% Similarity=0.235 Sum_probs=36.6
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
...+.+++|.++ .....++..+++.++.+..|.++||++||+.+..
T Consensus 17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 64 (399)
T TIGR00893 17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAV 64 (399)
T ss_pred HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHH
Confidence 344556677653 3578889999999999999999999999877544
No 111
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=85.50 E-value=2 Score=42.43 Aligned_cols=80 Identities=19% Similarity=0.103 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHHHHHHHHHHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSYLRSIKLGRK 293 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~~~~~~~~~~ 293 (317)
..|.+-+.-|+...+..+..+-+.+|+++++.+. +-..+|+.+.+-.+|-.....+.||+.||+- +...+.+.
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~l-----Ll~~l~lF 88 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRL-----LLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH-----HHHHHHHH
Confidence 4577777778888888999999999999999974 3579999999999999999999999999864 33444445
Q ss_pred HHHHHHH
Q 021096 294 CKCFLVL 300 (317)
Q Consensus 294 ~~~~~~~ 300 (317)
.++|++-
T Consensus 89 i~~n~l~ 95 (394)
T COG2814 89 IVSNLLS 95 (394)
T ss_pred HHHHHHH
Confidence 5666554
No 112
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=85.28 E-value=1.4 Score=41.69 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=39.6
Q ss_pred eecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 234 VLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 234 ~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.-....+.++++.++ .....++..++..+|++..|.++||++||+.+..
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 61 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILG 61 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHH
Confidence 4455667788888763 3567889999999999999999999998776443
No 113
>PF13347 MFS_2: MFS/sugar transport protein
Probab=85.27 E-value=2.3 Score=41.53 Aligned_cols=77 Identities=18% Similarity=0.197 Sum_probs=54.2
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh-CCCc-hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GVND-TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~~~-~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+++..++++|+.++...++...+-.+.........+.. +.++ .+.+..+..+.+.++-+++++++||++||+.+.-
T Consensus 217 ~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 467888899999988888876444443333444444543 4432 3456667788899999999999999999887544
No 114
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=84.87 E-value=1.4 Score=43.24 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=33.5
Q ss_pred HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 241 IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 241 i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++.|.++ ..+..++..++..+|.+.+|+++||++||+.+..
T Consensus 52 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~ 96 (438)
T TIGR00712 52 YLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPA 96 (438)
T ss_pred HHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHH
Confidence 334456653 3567888999999999999999999999876554
No 115
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=84.86 E-value=2.9 Score=40.34 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=46.0
Q ss_pred HHHHHHHHHhhcchhhe--ec-chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 218 WLLWFVYFLGVGAGVTV--LN-NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 218 w~l~~~~~~~~g~Gl~~--i~-n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
|++...++.+.-...+. ++ -...+.++++.++ ....+++..++..++-+..|.++||++||+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~ 79 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAI 79 (393)
T ss_pred HHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHH
Confidence 66666665555444332 11 2445666777763 3568888888999999999999999999987554
No 116
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=84.69 E-value=1.6 Score=40.96 Aligned_cols=41 Identities=7% Similarity=-0.154 Sum_probs=31.6
Q ss_pred HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 241 IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 241 i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+.+++|.++ .....++..+...++....|.++||++||+.+
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~ 66 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL 66 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Confidence 345567653 34677788888999999999999999988763
No 117
>PRK10504 putative transporter; Provisional
Probab=84.52 E-value=2 Score=42.26 Aligned_cols=74 Identities=14% Similarity=0.011 Sum_probs=48.8
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecc-hHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNN-LAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n-~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+.+|+++|+...+..++...+ ...... .....+. +|.+. ..+......+....++++.|.++||++||+.+..
T Consensus 255 ~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~ 332 (471)
T PRK10504 255 LKLFRTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVA 332 (471)
T ss_pred HHHhcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 4588999999887766655443 333333 3334443 46553 2345566777788889999999999998876543
No 118
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=84.42 E-value=2 Score=43.76 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=31.0
Q ss_pred HHhCCCc--hhHHHHHHHhhhcccccccchhhhhh-hhhhhHH
Q 021096 243 VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHY-VRSLLLC 282 (317)
Q Consensus 243 ~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~-~r~~~~~ 282 (317)
+.+|.++ +....+...+...++.+..|+++||+ |||+.+.
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il 80 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM 80 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence 3456663 34567788888999999999999999 9887643
No 119
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=84.19 E-value=2.2 Score=44.66 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=53.6
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHh-hhcccccccchhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSL-CNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si-~n~~GRl~~G~~SD~~~r~ 278 (317)
..++.++++.||...+..++..+.-..+..-+....+. ++.+. +.++.++..+ ...+|.++.|+++||++.+
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 45789999999999998888777666666667777765 46553 3445555565 4679999999999999854
No 120
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=83.85 E-value=3.6 Score=41.08 Aligned_cols=45 Identities=11% Similarity=0.114 Sum_probs=31.9
Q ss_pred hHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 238 LAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 238 ~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
...+.+ .+|.+. ..+..+...++..+|++..|+++||++||+.+.
T Consensus 273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~ 320 (490)
T PRK10642 273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVI 320 (490)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 444443 346653 234566677889999999999999999987543
No 121
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=83.30 E-value=2.7 Score=42.44 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=30.7
Q ss_pred HHHhCCCc--hhHHHHHHHhhhcccccccchhhhh-hhhhhhHHH
Q 021096 242 GVALGVND--TTELLCLFSLCNFAGRLGSGVLSEH-YVRSLLLCS 283 (317)
Q Consensus 242 ~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~-~~r~~~~~r 283 (317)
.+.+|.++ +...++.+....++.-+.+|+++|| +|||+.+..
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 34577654 3456666777777777889999999 999987554
No 122
>PRK03893 putative sialic acid transporter; Provisional
Probab=83.29 E-value=2.4 Score=41.84 Aligned_cols=47 Identities=15% Similarity=0.105 Sum_probs=35.8
Q ss_pred cchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 236 NNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 236 ~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.....+.+ .+|.+. .....+...+++.+|++..|+++|+++||+.+.
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~ 345 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV 345 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 34555554 566653 456888899999999999999999999886543
No 123
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=83.25 E-value=2.5 Score=42.38 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=38.3
Q ss_pred chHHHHHHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-+.+|.++++.+ +.+..++...++.+.+-+.+|.++|+++||+.+..
T Consensus 28 a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~ 76 (495)
T PRK14995 28 AAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLML 76 (495)
T ss_pred HHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 357788888765 34678888999999999999999999999987544
No 124
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=82.81 E-value=1.6 Score=42.12 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=45.4
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHH-HH-hCCC-chhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG-VA-LGVN-DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~-~a-l~~~-~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.+++.++++.||.+.+..++...+. ...+...... +. ++.. ....+.++..+...+|.+.+|.++||++||+.+
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~ 290 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAF-NIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF 290 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHH-HHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 3467788899998877665544332 2222221111 11 1211 123455667888999999999999999987654
No 125
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=82.66 E-value=3.2 Score=40.70 Aligned_cols=33 Identities=15% Similarity=-0.036 Sum_probs=29.2
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
...++...++..+|-+.+|+++||++||+.+-.
T Consensus 58 ~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 58 GFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 467889999999999999999999999987544
No 126
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=82.52 E-value=3.5 Score=39.50 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=36.0
Q ss_pred HHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 239 AQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 239 ~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..+.++++.++ .....+...++..+|.+..|.++||++||+.+..
T Consensus 39 ~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 39 PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 35667777763 4568888999999999999999999999976544
No 127
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=82.19 E-value=2.7 Score=40.31 Aligned_cols=73 Identities=11% Similarity=0.033 Sum_probs=44.5
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheec-chHHHHHHh----CCCc--hhHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLN-NLAQIGVAL----GVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~-n~~~i~~al----~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
+.++.+|++++|.+.+..++.. ....... -.....++. +.+. .....++..+.+.++.+..|.+.||+++|+
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~ 285 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVA-CVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN 285 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 4578899999987665443322 2222121 122222332 1111 234566777888999999999999999886
Q ss_pred h
Q 021096 280 L 280 (317)
Q Consensus 280 ~ 280 (317)
.
T Consensus 286 ~ 286 (396)
T TIGR00882 286 A 286 (396)
T ss_pred h
Confidence 5
No 128
>PTZ00207 hypothetical protein; Provisional
Probab=81.93 E-value=2.8 Score=43.63 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhhcchhheecch--HHHHHHhCCCchh--HHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 217 FWLLWFVYFLGVGAGVTVLNNL--AQIGVALGVNDTT--ELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 217 Fw~l~~~~~~~~g~Gl~~i~n~--~~i~~al~~~~~~--~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
||.+...+.+...+|.++..++ .++.+++|++... ...++ ...-+.+-+.+|+++|++++|+.+
T Consensus 27 w~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vl 94 (591)
T PTZ00207 27 FALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIF 94 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHH
Confidence 3455555555555666665554 5677778876432 22232 222233455789999999998653
No 129
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=81.57 E-value=3 Score=39.95 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=28.8
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+..++..++..++.+.+|+++||++||+.+..
T Consensus 74 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 74 GLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 467889999999999999999999999876544
No 130
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=81.55 E-value=3.7 Score=39.62 Aligned_cols=75 Identities=15% Similarity=0.077 Sum_probs=46.1
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhh-eecchHHHHHHhCCCch--hHHHHHHH-hhhcccccccchhhhhhhhhhhH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVT-VLNNLAQIGVALGVNDT--TELLCLFS-LCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~-~i~n~~~i~~al~~~~~--~~~vsl~s-i~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
.+.+.+|++++|.+.+..++....... ...+...+.+.+|.+.. ....+..+ +...+|.++.|.+.||+++|+..
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l 279 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL 279 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 356788999999877765554332221 11222234455676543 23333444 35788999999999999987654
No 131
>PRK12382 putative transporter; Provisional
Probab=80.91 E-value=4.9 Score=38.37 Aligned_cols=42 Identities=12% Similarity=-0.050 Sum_probs=31.1
Q ss_pred HHHHhCCCchhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 241 IGVALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 241 i~~al~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
..++.+.++.....+..++.+.+|++..|.++||+++|+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 283 (392)
T PRK12382 242 YFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAI 283 (392)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehH
Confidence 334445544445666788889999999999999999876643
No 132
>PRK15011 sugar efflux transporter B; Provisional
Probab=80.62 E-value=3.6 Score=39.61 Aligned_cols=46 Identities=11% Similarity=0.109 Sum_probs=31.5
Q ss_pred chHHHH-HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 237 NLAQIG-VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 237 n~~~i~-~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
...... +.++.++ .....++..+...+|++..|.++||++||+.+.
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~ 286 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMR 286 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 344444 3456653 234566666777889999999999999986543
No 133
>PRK09848 glucuronide transporter; Provisional
Probab=80.12 E-value=2.2 Score=41.89 Aligned_cols=52 Identities=12% Similarity=-0.004 Sum_probs=36.6
Q ss_pred hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH-HHHHHHHHHHHHH
Q 021096 245 LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS-YLRSIKLGRKCKC 296 (317)
Q Consensus 245 l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r-~~~~~~~~~~~~~ 296 (317)
+|.+. .....++..++.++.-+.+|+++||.++|++..| |+...++..+..+
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 35542 3457778889999999999999999977766566 6555544443333
No 134
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=80.12 E-value=15 Score=40.71 Aligned_cols=77 Identities=25% Similarity=0.232 Sum_probs=55.4
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++...+++.+|.+.+.+++....+.++......+.+. +|.+. ..++.+..+++..+|.+..|.++++..+++.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~ 296 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPI 296 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehH
Confidence 35667788899999887777666555555556666654 46553 3567889999999999999999987766554443
No 135
>PRK09952 shikimate transporter; Provisional
Probab=79.63 E-value=4.7 Score=39.62 Aligned_cols=72 Identities=11% Similarity=-0.038 Sum_probs=40.1
Q ss_pred hhhhhhHHHHHHHHHHhhcchhh-eecchHHH-HHHhCCCchh--HHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 211 AFVKADFWLLWFVYFLGVGAGVT-VLNNLAQI-GVALGVNDTT--ELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 211 ~l~t~~Fw~l~~~~~~~~g~Gl~-~i~n~~~i-~~al~~~~~~--~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.++++.+|.+-+...+....+.. ........ .+.++.++.. ....+.++.+.+|++++|+++||++||+.+.
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~ 320 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI 320 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence 55666777664432222222211 22222222 2345555432 2334566778899999999999999986543
No 136
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=77.95 E-value=4.1 Score=44.87 Aligned_cols=74 Identities=20% Similarity=0.103 Sum_probs=52.5
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCch---hHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVNDT---TELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~~---~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+.+.++++.+|.+.+.+++....+..+........+ .+|.+.. .++.++..++..+|.+++|+++|++++++.+
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~ 302 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLV 302 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccch
Confidence 456777888898877776666655555555555554 3566533 4567778888999999999999998876543
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=77.11 E-value=5.6 Score=37.86 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=24.7
Q ss_pred HHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 252 ELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 252 ~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+..++.++.+.+++...|.++||++||+.+.
T Consensus 262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 262 MIASVPGVAALLSAPRLGKLGDRIGPEKILI 292 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHH
Confidence 3455667888999999999999999876543
No 138
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=76.50 E-value=5.4 Score=40.40 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=37.3
Q ss_pred eecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhh----hhhhhhHHH
Q 021096 234 VLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEH----YVRSLLLCS 283 (317)
Q Consensus 234 ~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~----~~r~~~~~r 283 (317)
...++..+.+.+|.+. ....+.+-.+...+.-.+.|++||| +|||+.+-.
T Consensus 23 ~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il 78 (477)
T TIGR01301 23 QLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIA 78 (477)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHH
Confidence 3456677778888864 3456677778899999999999995 888876543
No 139
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=75.93 E-value=6.4 Score=38.53 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHhhcchhheec-chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 216 DFWLLWFVYFLGVGAGVTVLN-NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~-n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.|+++...++ .+|...-+++ -..++.++++.++ ..+..+...++..++.+..|++.||++||+.+..
T Consensus 4 ~~~~~~~~f~-~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~ 73 (410)
T TIGR00885 4 PFALITSLFA-LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL 73 (410)
T ss_pred HHHHHHHHHH-HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 3555544333 3443332222 2244555667653 3567788889999999999999999999876544
No 140
>PRK11010 ampG muropeptide transporter; Validated
Probab=75.51 E-value=6.8 Score=39.37 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=42.8
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheec-chHHH-HHHhCCCch--hHHH-HHHHhhhcccccccchhhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLN-NLAQI-GVALGVNDT--TELL-CLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~-n~~~i-~~al~~~~~--~~~v-sl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+.+.+++.++|.+.+..++.. .+..... -.... .+.+|++.. .... .+..++..+|.++.|+++||+++|+.
T Consensus 215 l~~~~~~~~~~~~ll~~~l~~-~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLYK-LGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA 291 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 456677777886665443322 2222111 12223 345677643 2333 34457888999999999999998754
No 141
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=75.24 E-value=2.1 Score=43.27 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=24.9
Q ss_pred HHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 255 CLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 255 sl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..-.++|.+|.+++|++.|++|||+.+-.
T Consensus 91 ~~A~vGti~GQl~FG~lgD~~GRK~vYG~ 119 (538)
T KOG0252|consen 91 AAALVGTIFGQLFFGWLGDKFGRKKVYGK 119 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhhhH
Confidence 34557899999999999999999988666
No 142
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=75.14 E-value=3.9 Score=40.89 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=44.7
Q ss_pred HHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccceeee
Q 021096 241 IGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSYLRSIKLGRKCKCFLVLFEKFQTTVEVF 311 (317)
Q Consensus 241 i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (317)
+.++.+.+. ..++-|.+++.=+++.+.+|.+|||-..|+ ++.+.|.+.++++++. .|.+++..|
T Consensus 55 l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~-----fm~~gLilsai~nil~--Gfs~s~~~~ 120 (448)
T COG2271 55 LIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY-----FMAFGLILSAIVNILF--GFSPSLFLF 120 (448)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce-----eehHHHHHHHHHHHHH--hhhhHHHHH
Confidence 445555653 356889999999999999999999988765 4455566666666555 555544433
No 143
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=75.08 E-value=6.4 Score=43.62 Aligned_cols=73 Identities=21% Similarity=0.133 Sum_probs=42.7
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc-------hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND-------TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~-------~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
++++++.+|+.+|+..++..-.--+....+..+.. .+..+. ..+..++..+...+.-+++|+++|+++||+.
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 45788889998888766544332222112121111 221111 1234445666677888889999999999875
Q ss_pred H
Q 021096 281 L 281 (317)
Q Consensus 281 ~ 281 (317)
+
T Consensus 85 ~ 85 (1140)
T PRK06814 85 A 85 (1140)
T ss_pred H
Confidence 4
No 144
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=74.20 E-value=5 Score=38.74 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=34.8
Q ss_pred hHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 238 LAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 238 ~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+.++.++++.++. ....+.+.+...++.+..|+++||++||+.
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~ 58 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF 58 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 4567777777643 467888899999999999999999998754
No 145
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=73.28 E-value=8.5 Score=37.68 Aligned_cols=39 Identities=5% Similarity=0.095 Sum_probs=30.6
Q ss_pred HHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 242 GVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 242 ~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.+++|.+. ..++.++..++..++.+.+|.++||++|+|+
T Consensus 30 ~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~ 70 (418)
T TIGR00889 30 SKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQK 70 (418)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 34456653 3568899999999999999999999976443
No 146
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=73.27 E-value=4 Score=41.08 Aligned_cols=77 Identities=18% Similarity=0.228 Sum_probs=49.4
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.++.+++.+|-++.+.+..+.|.=-....++-....-.||+ .+-..-.+.-+...+|-+.+|.+-||..+-+...+
T Consensus 258 si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~ 336 (480)
T KOG2563|consen 258 SIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTL 336 (480)
T ss_pred HHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 567889999999998888666554222222222222223554 33344455667789999999999999876554333
No 147
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=72.44 E-value=4.3 Score=39.22 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=29.1
Q ss_pred HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 244 ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 244 al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+|.+. ..+..++..++.+++-...|++|||..+|++-.|
T Consensus 29 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr 70 (437)
T TIGR00792 29 VLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFR 70 (437)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcc
Confidence 345543 3467788889999999999999999765543333
No 148
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=72.05 E-value=12 Score=35.57 Aligned_cols=70 Identities=10% Similarity=0.132 Sum_probs=32.4
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecc-hHHHHHH-hCCCchhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNN-LAQIGVA-LGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n-~~~i~~a-l~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+++.++++.+|...+..++.. .+.....+ ...+.++ +|.+.. ..++....+..|.++.+.+.+++.+|+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 271 (394)
T PRK11652 200 YRTLLSNRRFNCYLLMLIGTL-AGIAVFEACSGVLMGAVLGLSSM--TVSILFILPIPAAFFGAWFAGRPNKRFS 271 (394)
T ss_pred HHHHHcChHHHHHHHHHHHHH-HHHHHHHHhChHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888886655443322 22222221 2223333 555432 2233333344555555555555555543
No 149
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=71.85 E-value=6.6 Score=38.45 Aligned_cols=46 Identities=13% Similarity=0.060 Sum_probs=34.2
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
...+.+..|.+. ......+.++.+.+|.+..|+++||++||+.+..
T Consensus 294 ~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~ 341 (479)
T PRK10077 294 APEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQII 341 (479)
T ss_pred HHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 345556667653 3455567888999999999999999998876444
No 150
>TIGR00898 2A0119 cation transport protein.
Probab=71.84 E-value=2.5 Score=41.97 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=28.7
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+..++..++..+|.+.+|.++||+|||+.+..
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~ 162 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLL 162 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHH
Confidence 467888999999999999999999999876444
No 151
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=71.57 E-value=3.1 Score=41.73 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=27.2
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+..+++-++..+|-+++|.+||++|||..+..
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~ 153 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLV 153 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHHHHHH
Confidence 345677888899999999999999999976444
No 152
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=71.55 E-value=13 Score=35.61 Aligned_cols=47 Identities=13% Similarity=-0.062 Sum_probs=36.2
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSY 284 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~ 284 (317)
+..+.+++|.+. ....+++.++...++.+.+|.++||++|+....|+
T Consensus 27 l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~ 75 (382)
T PRK11128 27 WSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRL 75 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHH
Confidence 445567777763 45688899999999999999999999996555553
No 153
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=71.36 E-value=4.4 Score=40.84 Aligned_cols=33 Identities=24% Similarity=0.260 Sum_probs=30.1
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.+++..++++.+|-+.+|.++|++|||+.+.-
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~ 124 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLL 124 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 589999999999999999999999999987544
No 154
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=71.03 E-value=2.8 Score=42.55 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 252 ELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 252 ~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
..|+++.+++.+|-+..|++.|++|||..
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~ 92 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNA 92 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHH
Confidence 57899999999999999999999999955
No 155
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=70.84 E-value=12 Score=37.22 Aligned_cols=30 Identities=33% Similarity=0.431 Sum_probs=26.0
Q ss_pred HHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 254 LCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 254 vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+-+.+..-+=|-++.|++-|++|||++++.
T Consensus 387 llitslaefPGlLIt~~iverlGRKkTMal 416 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKTMAL 416 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhHHHH
Confidence 335667789999999999999999999888
No 156
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=70.63 E-value=12 Score=37.88 Aligned_cols=71 Identities=23% Similarity=0.318 Sum_probs=48.8
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH--HhCCCchh--HHHHHHHhhhcccccccchhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV--ALGVNDTT--ELLCLFSLCNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~--al~~~~~~--~~vsl~si~n~~GRl~~G~~SD~~~r~ 278 (317)
|+++.-|.++.+.+.+.+++-. -|+..+...+.+.. .+|.++.. .+.-+..+.+..|-+++|++.||++.|
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~-dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k 347 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYS-DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK 347 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5566666677777666555543 55555555555554 36776543 345567788999999999999999988
No 157
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=70.56 E-value=0.27 Score=47.96 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=43.5
Q ss_pred CCHHhhhhhhh----HHHHHHHHHHhhcchhhee-cchHHHHHHhCCCchhHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 206 FKLGEAFVKAD----FWLLWFVYFLGVGAGVTVL-NNLAQIGVALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 206 ~t~~~~l~t~~----Fw~l~~~~~~~~g~Gl~~i-~n~~~i~~al~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.++.+.++++. +...+.+..+....|...+ +...++.+..+.++......+..+.+..+-++..++.||++||+.
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~ 318 (451)
T PF00083_consen 239 ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKL 318 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34555555533 2222223333334443333 334455556565544334456677888888999999999999865
Q ss_pred H
Q 021096 281 L 281 (317)
Q Consensus 281 ~ 281 (317)
.
T Consensus 319 ~ 319 (451)
T PF00083_consen 319 L 319 (451)
T ss_pred c
Confidence 3
No 158
>PF12832 MFS_1_like: MFS_1 like family
Probab=69.77 E-value=8.1 Score=28.93 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=40.1
Q ss_pred HHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 221 WFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 221 ~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
|+.++++.|+=+-++. -..+++|.+. ..+..++.-+...++..++|.+.||.+|++..-+
T Consensus 9 yf~~f~~~g~~~Pfl~---~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLP---LYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHhhhh---HhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 4444454554333332 2344567763 3457777888899999999999999999877544
No 159
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=69.70 E-value=7.4 Score=36.55 Aligned_cols=46 Identities=24% Similarity=0.162 Sum_probs=37.2
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+..+.++++.+. .....++..++..++.+..|.++||++||+.+..
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 70 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAA 70 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHH
Confidence 445677777763 4568899999999999999999999999877544
No 160
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=68.81 E-value=11 Score=36.04 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=35.4
Q ss_pred chHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 237 NLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 237 n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
-+..+.+++|.+. ....+++..+...++-+.+|.++||.+|+....+
T Consensus 26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 74 (382)
T TIGR00902 26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALR 74 (382)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3667777888764 3457778888888888999999999988654434
No 161
>PRK10489 enterobactin exporter EntS; Provisional
Probab=67.95 E-value=14 Score=35.58 Aligned_cols=69 Identities=14% Similarity=-0.054 Sum_probs=41.7
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhh
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~ 278 (317)
+..++++.+|.+++..++....+ .+........++ +|.+. .....++.++++.+|++..|+++|+..++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~ 289 (417)
T PRK10489 218 RFLLASPVVGGIALLGGLLTMAS-AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG 289 (417)
T ss_pred HHHHcChHHHHHHHHHHHHHHHH-hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc
Confidence 44667777776665444332211 122223344454 56653 34567788899999999999999875443
No 162
>PRK09669 putative symporter YagG; Provisional
Probab=67.44 E-value=7.6 Score=38.07 Aligned_cols=76 Identities=14% Similarity=0.030 Sum_probs=42.1
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh--CCCch-hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL--GVNDT-TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al--~~~~~-~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++.+|++.||.+.+..++...+- ...+......... +..+. ..+.....+...+|-++++.++||++||+.+..
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~ 299 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAV-VTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKW 299 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHH-HHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 3567789999999877655432222 2222222211111 11121 222233345667888889999999998876543
No 163
>PRK09952 shikimate transporter; Provisional
Probab=66.73 E-value=20 Score=35.09 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=19.9
Q ss_pred hhhcccccccchhhhhhhhhhhHHH
Q 021096 259 LCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 259 i~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++..+|.+..|+++||+|||+.+..
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~ 99 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLML 99 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHH
Confidence 4456777889999999999987544
No 164
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=66.61 E-value=11 Score=37.46 Aligned_cols=70 Identities=17% Similarity=0.287 Sum_probs=41.2
Q ss_pred hhhhhHHH---HHHHHHHhhcchhheecchHHHHHHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 212 FVKADFWL---LWFVYFLGVGAGVTVLNNLAQIGVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 212 l~t~~Fw~---l~~~~~~~~g~Gl~~i~n~~~i~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.|+.+||. .+..+++.+|+-+-... --..+..|.+ +.-+..+..++...+.-.+.|.++||++.|++.-.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~--iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~ 78 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFP--IWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLW 78 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHH--HHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHH
Confidence 35566763 34455555665443221 1112234554 33467777777788888889999999998877443
No 165
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=65.19 E-value=8.1 Score=38.64 Aligned_cols=33 Identities=21% Similarity=0.155 Sum_probs=28.8
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
....+...++..+|.+.+|+++||+|||+.+..
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 467888899999999999999999999987544
No 166
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=64.79 E-value=3.1 Score=43.50 Aligned_cols=62 Identities=6% Similarity=-0.000 Sum_probs=44.8
Q ss_pred hHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHHH--HHHHHHHHHHHHHHHH
Q 021096 238 LAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS--YLRSIKLGRKCKCFLV 299 (317)
Q Consensus 238 ~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r--~~~~~~~~~~~~~~~~ 299 (317)
+.+|-+.++.++ ..+.++...+++.++-+..|++.||.+|++.+.. .+..+..+++++.|++
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~ 121 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFL 121 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHh
Confidence 345555666653 3468889999999999999999999999887555 4545555556666654
No 167
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=64.67 E-value=15 Score=36.69 Aligned_cols=29 Identities=28% Similarity=0.275 Sum_probs=23.4
Q ss_pred HHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 255 CLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 255 sl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++.-++-.+|-+.+|+++||+|||+.+..
T Consensus 64 ~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 92 (490)
T PRK10642 64 SVPFLIRPLGGLFFGMLGDKYGRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 44446678899999999999999987555
No 168
>PRK15011 sugar efflux transporter B; Provisional
Probab=64.16 E-value=19 Score=34.58 Aligned_cols=66 Identities=11% Similarity=0.025 Sum_probs=34.9
Q ss_pred hHHHHHHHHHH-hhcchhheecchHHHHHHhCCCch--hHHHHHHHh-hhcccccccchhhhhhhhhhhHH
Q 021096 216 DFWLLWFVYFL-GVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSL-CNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 216 ~Fw~l~~~~~~-~~g~Gl~~i~n~~~i~~al~~~~~--~~~vsl~si-~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.-|.+++..++ +.+.++..-.--..+.++++.+.. .+.++...+ ...++.+..|+ +||++||+.+-
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~ 85 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLI 85 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHH
Confidence 44555554333 333333222222234566777643 334444444 45566777777 89999988743
No 169
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=61.82 E-value=25 Score=34.63 Aligned_cols=65 Identities=18% Similarity=0.249 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.+...+++.+++..|+=+.+ .+..-++.|.+. ..+..++..+...++-.++|+++||..+++++-
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~---~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l 71 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPY---LPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRIL 71 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHH
Confidence 34556666777777775554 345667777763 346778888889999999999999987665533
No 170
>PRK10429 melibiose:sodium symporter; Provisional
Probab=58.54 E-value=12 Score=37.19 Aligned_cols=74 Identities=11% Similarity=-0.095 Sum_probs=41.0
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCC-c-hhHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN-D-TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~-~-~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+..++++.|+.+.+..++......+.........+..... + ...+.++.++...++-+++|.++||++||+.+.
T Consensus 225 ~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~ 300 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWA 300 (473)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 3455777887777665554432222111111111111111 1 123445556777888889999999999987754
No 171
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=58.40 E-value=31 Score=34.73 Aligned_cols=71 Identities=21% Similarity=0.189 Sum_probs=50.6
Q ss_pred hhhhhHHHHHHHHHHhhcch-hheecchHHHHHHhCCCch-hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 212 FVKADFWLLWFVYFLGVGAG-VTVLNNLAQIGVALGVNDT-TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 212 l~t~~Fw~l~~~~~~~~g~G-l~~i~n~~~i~~al~~~~~-~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.+++-++..-+..+-.. +| ..+++-..+|.+..|.++. .....+.++.|.+|=++.+++-||++||.-+-.
T Consensus 292 ~~~~~~i~~~l~~fqq~-tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~ 364 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQL-TGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLF 364 (513)
T ss_pred hHHHHHHHHHHHHHHHH-hCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 44445555656555555 45 5577788888888888744 556667788888888888999999999865433
No 172
>PRK10054 putative transporter; Provisional
Probab=58.24 E-value=19 Score=34.73 Aligned_cols=73 Identities=8% Similarity=-0.051 Sum_probs=40.6
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh---CCCch--hHHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL---GVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al---~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
.++.++++++|.+.+..++.....-.+.....+..... +.+.. ....++.++.-...+...|.++|+.++|+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 199 PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL 276 (395)
T ss_pred hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH
Confidence 36788899999888776664444332333333333222 22221 234555555555666666777787776654
No 173
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=57.96 E-value=2.7 Score=40.93 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=27.3
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
.+..+...++..+|-+++|+++||+|||+.+.
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~ 80 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALI 80 (451)
T ss_pred HHHHHHHHhhhccccccccccccccccccccc
Confidence 35677888999999999999999999997633
No 174
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=57.39 E-value=26 Score=26.96 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=24.3
Q ss_pred cCC-CCCchhHHHHHHhhhhHHHHHHHHHHHHcC
Q 021096 3 NFP-LSRGTVSGILKGYAGIAAAIYTVLYNMVLQ 35 (317)
Q Consensus 3 nFP-~~RG~vvgi~k~~~GLSaaIfs~i~~~ff~ 35 (317)
.+| ++||.+.++......+++.+-..+.....+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 466 458999999888888888777766665543
No 175
>PRK11462 putative transporter; Provisional
Probab=57.25 E-value=26 Score=34.90 Aligned_cols=74 Identities=9% Similarity=0.152 Sum_probs=40.4
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh-CCCc-hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GVND-TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~~~-~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+++.++++.|+.+...+++....-.+.-.......+.. +..+ .+.+..+..+.+.+|=+++|.++||++||+.+
T Consensus 221 l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~ 296 (460)
T PRK11462 221 LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF 296 (460)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 45567777777765544333222111112222222222 2222 12344566677888888999999999987653
No 176
>PRK11010 ampG muropeptide transporter; Validated
Probab=57.06 E-value=26 Score=35.22 Aligned_cols=53 Identities=13% Similarity=0.103 Sum_probs=29.2
Q ss_pred hhcchhheecc-hHHHHHHhCCCchhH-HHHHHHhhhcccccccchhhhhh-----hhhhh
Q 021096 227 GVGAGVTVLNN-LAQIGVALGVNDTTE-LLCLFSLCNFAGRLGSGVLSEHY-----VRSLL 280 (317)
Q Consensus 227 ~~g~Gl~~i~n-~~~i~~al~~~~~~~-~vsl~si~n~~GRl~~G~~SD~~-----~r~~~ 280 (317)
..|....+++. +....++.|.+...+ ..++++.. .++++++|.++||+ |||+.
T Consensus 23 ~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 23 ASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCchH
Confidence 44444444444 333334445542221 22333333 36899999999999 77665
No 177
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=56.44 E-value=6.3 Score=30.55 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=23.1
Q ss_pred HHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 255 CLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 255 sl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+..++.+.++.+..|++.||++||+.+..
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~ 33 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLV 33 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHH
Confidence 34567788899999999999998876544
No 178
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=56.31 E-value=73 Score=31.84 Aligned_cols=72 Identities=25% Similarity=0.277 Sum_probs=57.0
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCc--hhHHHHHHHhhhcccccccchhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~ 278 (317)
+..++++++.+|.--+..+|-.|+..++=+-+.+.... .|.++ ++.+++..=++-.+||+..-++-.++...
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~ 302 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE 302 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 78899999999999999999999999988888888887 45553 46788888889999995554443355443
No 179
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=55.18 E-value=19 Score=36.78 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=54.9
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCCCc--hhHHHHHHHhhhcccccccchhhhhh-hhhhhHHHHH
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVND--TTELLCLFSLCNFAGRLGSGVLSEHY-VRSLLLCSYL 285 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~-~r~~~~~r~~ 285 (317)
.-++-..|||--|--+.. -++...+-..+.++.+|.++ +..+++.++-.-+.--++.||++||+ |+|++
T Consensus 23 l~~if~vE~WERFsyYGm---raiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t----- 94 (498)
T COG3104 23 LYLIFFVELWERFSYYGM---RAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT----- 94 (498)
T ss_pred HHHHHHHHHHHHHhhhhh---HHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-----
Confidence 456777788887765532 22333343444444466764 34577777777788888999999998 55554
Q ss_pred HHHHHHHHHHHHHHH
Q 021096 286 RSIKLGRKCKCFLVL 300 (317)
Q Consensus 286 ~~~~~~~~~~~~~~~ 300 (317)
+...-.++.+||++|
T Consensus 95 I~lGail~~iGh~~L 109 (498)
T COG3104 95 IVLGAILMAIGHLVL 109 (498)
T ss_pred HHHHHHHHHHHHHHH
Confidence 233444677899999
No 180
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=54.55 E-value=24 Score=36.10 Aligned_cols=67 Identities=16% Similarity=0.270 Sum_probs=40.6
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHhCC-------CchhHHHHHHHhhhc----ccccccchhhhhhh
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGV-------NDTTELLCLFSLCNF----AGRLGSGVLSEHYV 276 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~-------~~~~~~vsl~si~n~----~GRl~~G~~SD~~~ 276 (317)
.+.-+|+++|..+|+.-.+ +|+|.-.+..+. +.....+++...+.. +--+.+|.+.|++.
T Consensus 3 ~~aplr~~~Fr~lw~a~~i---------S~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~d 73 (524)
T PF05977_consen 3 AFAPLRNRNFRRLWIAQLI---------SNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFD 73 (524)
T ss_pred CcccccCchHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3567889999999986543 344433333221 222345555544443 44467899999999
Q ss_pred hhhhHHH
Q 021096 277 RSLLLCS 283 (317)
Q Consensus 277 r~~~~~r 283 (317)
||+-+-.
T Consensus 74 rrrili~ 80 (524)
T PF05977_consen 74 RRRILIL 80 (524)
T ss_pred chHHHHH
Confidence 9887544
No 181
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=52.32 E-value=6.4 Score=39.10 Aligned_cols=29 Identities=31% Similarity=0.302 Sum_probs=25.9
Q ss_pred HHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 252 ELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 252 ~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
..-|.+++..++.-..+|-+||+.|||-.
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRkpv 100 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRKPV 100 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCchHH
Confidence 46678999999999999999999999865
No 182
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=52.14 E-value=18 Score=36.15 Aligned_cols=60 Identities=22% Similarity=0.326 Sum_probs=38.6
Q ss_pred ccCCCC--CchhHHHHHHhhhhHHH---HHHHHHHHHcCCCchHHHHHHHHHHHHHHHhheeeeeec
Q 021096 2 RNFPLS--RGTVSGILKGYAGIAAA---IYTVLYNMVLQNSATTLLLFLALGIPLICLVTTYFIRAC 63 (317)
Q Consensus 2 ~nFP~~--RG~vvgi~k~~~GLSaa---Ifs~i~~~ff~~d~~~fllfLa~~~~~v~~l~~~fir~~ 63 (317)
+.||++ ||.|.|+..+|.+||-- -|.-+.+-+. +....|+ .|+++..+-+.+-++.+++.
T Consensus 186 d~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFl-VL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 186 DVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFL-VLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHH-HHHHHHHHHHHHHHheeCcc
Confidence 468965 79999999999999843 3433333232 4555554 45666666666666666543
No 183
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=50.10 E-value=31 Score=33.13 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=30.2
Q ss_pred hhcchhheecchHH-HHHHhCCCchh--HHHHHHHhhhcccccccchhhhhh-----hhhhh
Q 021096 227 GVGAGVTVLNNLAQ-IGVALGVNDTT--ELLCLFSLCNFAGRLGSGVLSEHY-----VRSLL 280 (317)
Q Consensus 227 ~~g~Gl~~i~n~~~-i~~al~~~~~~--~~vsl~si~n~~GRl~~G~~SD~~-----~r~~~ 280 (317)
..|....++...-+ +-++.|.+... ++.++... .+.++++|.++||+ +||+.
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~ 69 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRG 69 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchh
Confidence 34444444443333 34566776432 33333333 48889999999999 77655
No 184
>PRK15075 citrate-proton symporter; Provisional
Probab=49.22 E-value=30 Score=33.68 Aligned_cols=46 Identities=15% Similarity=0.054 Sum_probs=27.6
Q ss_pred hHHHHHHhCCCch---hHHHHHHH-----hhhcccccccchhhhhhhhhhhHHH
Q 021096 238 LAQIGVALGVNDT---TELLCLFS-----LCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 238 ~~~i~~al~~~~~---~~~vsl~s-----i~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..++.++++.++. .+..+... +...+|-+.+|.++||++||+.+..
T Consensus 38 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 38 ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 3456677765432 22222221 2223566888999999999987544
No 185
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=48.60 E-value=18 Score=35.27 Aligned_cols=25 Identities=16% Similarity=0.041 Sum_probs=19.4
Q ss_pred hhhcccccccchhhhhhhhhhhHHH
Q 021096 259 LCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 259 i~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
++..+|-+.+|+++||+|||+.+..
T Consensus 74 ~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 74 LMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3344777889999999999987544
No 186
>PRK09848 glucuronide transporter; Provisional
Probab=48.28 E-value=21 Score=34.88 Aligned_cols=75 Identities=9% Similarity=-0.106 Sum_probs=41.1
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHH-hCCCch-hHHHHH-HHhhhcccccccchhhhhhhhhhhHH
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVA-LGVNDT-TELLCL-FSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~a-l~~~~~-~~~vsl-~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
+++.++++.|+.+.+..++...+-...........+. ++.++. ..+..+ ..+...++-.++|.++||+++|+.+.
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~ 298 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFL 298 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 5678899999988776666544332222222222222 233221 112122 23446667778888889888776543
No 187
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=48.04 E-value=19 Score=38.53 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=25.2
Q ss_pred HHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 254 LCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 254 vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..+.++....|.++.|+++||++||+.+..
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~ 630 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAG 630 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 456678889999999999999999977544
No 188
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=45.87 E-value=46 Score=34.02 Aligned_cols=69 Identities=10% Similarity=0.034 Sum_probs=57.5
Q ss_pred hhHHHHHHHHHHhhcchhheecchHHHHHHhCCC-chhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 215 ADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVN-DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 215 ~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~-~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
.++|.+++.+....|.|+-++.+-+.......+. ...+...+...+.++|-++.+.+...+..+++|+.
T Consensus 132 ~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~ 201 (509)
T KOG2504|consen 132 TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRG 201 (509)
T ss_pred hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHH
Confidence 3699999999999999999888877766665443 55778888888999999999999988888888777
No 189
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=43.08 E-value=89 Score=28.87 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=44.3
Q ss_pred HHHhhcchhheec--chHHHHHHhCCCch--hHHHHHHHhhhcccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 021096 224 YFLGVGAGVTVLN--NLAQIGVALGVNDT--TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSYLRSIKLGRKCKCFLV 299 (317)
Q Consensus 224 ~~~~~g~Gl~~i~--n~~~i~~al~~~~~--~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~~~~~~~~~~~~~~~~ 299 (317)
+.+...+|..+.. =..++-++++++.. +.+-..-.++..+| +..|.+.|+++.+. .+.+......+|.++
T Consensus 9 ~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~-----~l~iG~~~~~~GY~~ 82 (250)
T PF06813_consen 9 IWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV-----VLLIGAVLGFVGYGL 82 (250)
T ss_pred HHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH-----HHHHHHHHHHHHHHH
Confidence 3344455555444 34556667788643 33444455667777 88899999987543 223333444456666
Q ss_pred HHHhhcc
Q 021096 300 LFEKFQT 306 (317)
Q Consensus 300 ~~~~~~~ 306 (317)
++...+-
T Consensus 83 ~~l~~~~ 89 (250)
T PF06813_consen 83 LWLAVSG 89 (250)
T ss_pred HHHHHhC
Confidence 5555443
No 190
>PRK09669 putative symporter YagG; Provisional
Probab=39.29 E-value=37 Score=33.19 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=27.8
Q ss_pred hHHHHHHHhhhcccccccchhhhhhhhhhhHHH-HHH
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS-YLR 286 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r-~~~ 286 (317)
.+..++..++.++.=.++|++|||...|++-.| |++
T Consensus 48 g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il 84 (444)
T PRK09669 48 GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLL 84 (444)
T ss_pred HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHH
Confidence 457778889999999999999999765554444 554
No 191
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=38.83 E-value=88 Score=30.37 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=26.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhhcchhheecchHHHHHHh-CCCc
Q 021096 208 LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVAL-GVND 249 (317)
Q Consensus 208 ~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al-~~~~ 249 (317)
.++.++++.||...+.+.+....-..+..-...+.++. |.+.
T Consensus 211 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 253 (413)
T PRK15403 211 FRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTT 253 (413)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCH
Confidence 46788999999988876665443333333344566654 5553
No 192
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=38.51 E-value=41 Score=31.13 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=18.4
Q ss_pred hcccccccchhhhhhhhhhhHHH
Q 021096 261 NFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 261 n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
..+|-+..|.++||++||+.+..
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~ 70 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVI 70 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHH
Confidence 34678899999999999876444
No 193
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=36.14 E-value=88 Score=30.08 Aligned_cols=71 Identities=15% Similarity=-0.056 Sum_probs=35.7
Q ss_pred HhhhhhhhHHHHHHHHHHhhcchhheecchHHHHH-HhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhh
Q 021096 209 GEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGV-ALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSL 279 (317)
Q Consensus 209 ~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~-al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~ 279 (317)
++.++++.++...+...+..+++.....-.....+ .++.++ .....+..+++..+|-+..|.+.|+.++++
T Consensus 199 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~ 272 (393)
T PRK11195 199 RVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR 272 (393)
T ss_pred HHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 34555566555444433333322222222222333 345543 234566777777777777777777655543
No 194
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=35.95 E-value=5.4e+02 Score=27.04 Aligned_cols=30 Identities=13% Similarity=0.041 Sum_probs=18.2
Q ss_pred HHHHHHHhhhcccccccchhhhhhhhhhhHH
Q 021096 252 ELLCLFSLCNFAGRLGSGVLSEHYVRSLLLC 282 (317)
Q Consensus 252 ~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~ 282 (317)
......+++.++|-++.|.+.-+++ +.+++
T Consensus 353 ~~s~~~~fg~~~g~~i~g~l~~~ir-~~Kw~ 382 (599)
T PF06609_consen 353 WISSPVGFGSCAGAVILGLLFSKIR-HIKWQ 382 (599)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHcc-chhHH
Confidence 3445566777777778887764443 33333
No 195
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=35.05 E-value=83 Score=31.44 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=31.9
Q ss_pred HHhCCCc--hhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 243 VALGVND--TTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 243 ~al~~~~--~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
++++.++ ..+++++=.+...+-|+.-|++.|++|-|+..
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~ 82 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT 82 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH
Confidence 5556653 46789999999999999999999999977653
No 196
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=35.05 E-value=19 Score=36.67 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=75.5
Q ss_pred CCCCHHhhhhhhhHHHHHHHHHHhhcchhheecchHHHH--HHhCCCchhHHHHHHHhhhcccccccchhhhhhhhhhhH
Q 021096 204 EDFKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG--VALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLL 281 (317)
Q Consensus 204 ~d~t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i~--~al~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~ 281 (317)
+++++-+......+|++.+.+....|.+.-+++....-. +-+|..+....=.++++.+-.+|+..+.++-....-+..
T Consensus 374 ~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~ 453 (488)
T KOG2325|consen 374 EEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGP 453 (488)
T ss_pred ccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCc
Confidence 367888888889999999999999999999888765533 345665665666678888999999999998888887777
Q ss_pred HH-HHHHHHHHHHHHHHHHHH
Q 021096 282 CS-YLRSIKLGRKCKCFLVLF 301 (317)
Q Consensus 282 ~r-~~~~~~~~~~~~~~~~~~ 301 (317)
++ |.+...+.+.....+++|
T Consensus 454 ~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 454 RPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 77 877777666666666554
No 197
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=34.25 E-value=1.4e+02 Score=29.36 Aligned_cols=74 Identities=14% Similarity=0.185 Sum_probs=40.8
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecchHHH-HHHhCC-CchhHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI-GVALGV-NDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n~~~i-~~al~~-~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
+.++.+|+++++..++..++ .+...-..++-..+ -+++|. +... ...+.+ .+.+.=+..=.+++++.||.+..+
T Consensus 199 ~~~~llk~~~~~~Fll~~~l-~~~~~~~~~~f~~~yl~~~gg~~~~~-~g~~~~-l~~~aEi~~f~~~~~~~~r~g~~~ 274 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFL-IGISHAAYYTFFSIYLQELGGYSGST-IGILWA-LGVVAEIPFFFFSGRFLKRFGIKW 274 (400)
T ss_pred HHHHHhcCccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcccchhhH-HHHHHH-HHHHHHHHHHHHHHHHHHhcCHHH
Confidence 44789999999876665544 44444445555554 466773 3221 111222 122344455556778877776544
No 198
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=31.73 E-value=1.2e+02 Score=29.32 Aligned_cols=19 Identities=5% Similarity=0.023 Sum_probs=12.3
Q ss_pred CHHhhhhhhhHHHHHHHHH
Q 021096 207 KLGEAFVKADFWLLWFVYF 225 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~ 225 (317)
++++.++++.||.+.+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~ 218 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLT 218 (400)
T ss_pred HHHHHHcCchHHHHHHHHH
Confidence 3456778888886655443
No 199
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=31.44 E-value=1.4e+02 Score=29.24 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhhcchhheecchHHHHHHhCCCchh---HHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 216 DFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDTT---ELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 216 ~Fw~l~~~~~~~~g~Gl~~i~n~~~i~~al~~~~~~---~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
+|...|+....+-..-=.+.+ ..+++.|+++.. +++.=+. .+.+-..+.|.+.|++|||+.
T Consensus 38 ~yl~vY~La~~aDWLQGpY~Y---~LY~~yg~~~~qIa~Lf~~Gf~-Ss~i~g~~~G~laD~~Grk~~ 101 (354)
T PF05631_consen 38 KYLLVYLLAMAADWLQGPYLY---ALYESYGFSEHQIAILFVAGFA-SSAIFGTFVGSLADRYGRKKA 101 (354)
T ss_pred HHHHHHHHHHHHHHhhcchhH---HHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchHH
Confidence 566666554333332222333 345566765432 2222222 244444566788999999876
No 200
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=28.77 E-value=1e+02 Score=30.95 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=42.0
Q ss_pred CHHhhhhhhhHHHHHHHHHHhhcchhheecc-hHHHHH-HhCCCchh--HHHHHHHhhhcccccccchhhhhhhhhhh
Q 021096 207 KLGEAFVKADFWLLWFVYFLGVGAGVTVLNN-LAQIGV-ALGVNDTT--ELLCLFSLCNFAGRLGSGVLSEHYVRSLL 280 (317)
Q Consensus 207 t~~~~l~t~~Fw~l~~~~~~~~g~Gl~~i~n-~~~i~~-al~~~~~~--~~vsl~si~n~~GRl~~G~~SD~~~r~~~ 280 (317)
|++|..+..+.-...+..++ ---|+-.+.. .+-.+. .+|.++.. ++-...++....|-++.|++.||++-|+.
T Consensus 244 t~k~i~~~~~i~~FLiA~~~-~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v 320 (438)
T COG2270 244 TFKEIRGRKNLVLFLIARFF-YIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV 320 (438)
T ss_pred HHHHHhcccchHHHHHHHHH-HHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 45555555544333332222 1223322333 333344 46766543 45566778889999999999999998844
No 201
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=27.70 E-value=1.8e+02 Score=29.84 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcchhheecchHH----HHHHhCCCch---hHHHHHHHhhhcccccccchhhhhhhhhhhHHH
Q 021096 218 WLLWFVYFLGVGAGVTVLNNLAQ----IGVALGVNDT---TELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS 283 (317)
Q Consensus 218 w~l~~~~~~~~g~Gl~~i~n~~~----i~~al~~~~~---~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r 283 (317)
|..-..+.|.-|.=-.+=.|.+. +.+++|.++. ....+.+...-++.-+.+|+++||++-|+.+..
T Consensus 25 W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l 97 (511)
T TIGR00806 25 WRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVL 97 (511)
T ss_pred hhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 44444444444433333344443 3445566543 357888889999999999999999999887665
No 202
>PRK10429 melibiose:sodium symporter; Provisional
Probab=27.31 E-value=74 Score=31.54 Aligned_cols=27 Identities=7% Similarity=0.004 Sum_probs=20.9
Q ss_pred HHHHHHHhhhcccccccchhhhhhhhh
Q 021096 252 ELLCLFSLCNFAGRLGSGVLSEHYVRS 278 (317)
Q Consensus 252 ~~vsl~si~n~~GRl~~G~~SD~~~r~ 278 (317)
....+..++.++.=.++|++||+...|
T Consensus 46 ~i~~i~ri~dai~dp~~G~lsD~t~sr 72 (473)
T PRK10429 46 TLFLVARIWDAINDPIMGWIVNNTRSR 72 (473)
T ss_pred HHHHHHHHHHHHhhchheeehhcCCCC
Confidence 456677788888889999999966333
No 203
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=26.89 E-value=2.9e+02 Score=24.74 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=40.7
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHHhheeeeeecCCCCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHhhcccc
Q 021096 31 NMVLQNSATTLLLFLALGIPLICLVTTYFIRACTPASGEDSSEHGH-FVFTQAASVFLAIYVVAISITSDYVS 102 (317)
Q Consensus 31 ~~ff~~d~~~fllfLa~~~~~v~~l~~~fir~~p~~~~~~~~~~~~-f~~~~~~~v~l~~yl~~~~i~~~~~~ 102 (317)
.+||..|...|=+.--++..+++-..|+..+-+-|....|.+++.. +...-+.+....+++.+. +.+.+++
T Consensus 115 taff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~-i~t~~lP 186 (226)
T COG4858 115 TAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAVM-IATVFLP 186 (226)
T ss_pred HHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHH-HHHhhCC
Confidence 4578778777766666667777777777776665544333444432 333334444555555555 4455544
No 204
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=26.62 E-value=1.4e+02 Score=29.22 Aligned_cols=33 Identities=24% Similarity=0.134 Sum_probs=22.5
Q ss_pred cCCCCCchhHHHHHHhhhhHHHHHHHHHHHHcC
Q 021096 3 NFPLSRGTVSGILKGYAGIAAAIYTVLYNMVLQ 35 (317)
Q Consensus 3 nFP~~RG~vvgi~k~~~GLSaaIfs~i~~~ff~ 35 (317)
..|+++|.+.|+.-...-+++.+...+.....+
T Consensus 389 ~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 389 LAPRFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 356777888888777777777777666654444
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=23.76 E-value=41 Score=32.67 Aligned_cols=30 Identities=17% Similarity=0.053 Sum_probs=22.7
Q ss_pred hHHHHHHHhhhcccccccchhhh----hhhhhhh
Q 021096 251 TELLCLFSLCNFAGRLGSGVLSE----HYVRSLL 280 (317)
Q Consensus 251 ~~~vsl~si~n~~GRl~~G~~SD----~~~r~~~ 280 (317)
.+...+-.+++++-=.+.|.+|| |+|||+.
T Consensus 40 g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp 73 (428)
T PF13347_consen 40 GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRP 73 (428)
T ss_pred HHHHHHHHHhhhhcCCcEEEEEeeecccccccce
Confidence 34566677899999999999999 4555444
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=22.29 E-value=1.5e+02 Score=27.47 Aligned_cols=30 Identities=13% Similarity=-0.169 Sum_probs=22.4
Q ss_pred ccCC-CCCchhHHHHHHhhhhHHHHHHHHHH
Q 021096 2 RNFP-LSRGTVSGILKGYAGIAAAIYTVLYN 31 (317)
Q Consensus 2 ~nFP-~~RG~vvgi~k~~~GLSaaIfs~i~~ 31 (317)
+.+| ++||.+.|+.-....+|..+-..+..
T Consensus 110 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~ 140 (356)
T TIGR00901 110 EILSDEELGYGSTIYIVGYRAGMLLSGSLAL 140 (356)
T ss_pred HhCCHhhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 4575 67999999998888887766655553
No 207
>PRK11462 putative transporter; Provisional
Probab=21.00 E-value=92 Score=30.93 Aligned_cols=49 Identities=6% Similarity=-0.029 Sum_probs=34.6
Q ss_pred HHHHHHHhhhcccccccchhhhhhhhhhhHHH-HHHHHHHHHHHHHHHHHH
Q 021096 252 ELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS-YLRSIKLGRKCKCFLVLF 301 (317)
Q Consensus 252 ~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r-~~~~~~~~~~~~~~~~~~ 301 (317)
+...+--+|.++-=.+.|++|||...|++-.| |++..++.. +++...+|
T Consensus 49 ~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~-~i~~~llf 98 (460)
T PRK11462 49 TMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPF-GIVCVLAY 98 (460)
T ss_pred HHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHH-HHHHHHHH
Confidence 45566778888889999999999877777666 876655543 33444454
No 208
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=20.79 E-value=33 Score=35.31 Aligned_cols=61 Identities=15% Similarity=0.020 Sum_probs=0.0
Q ss_pred chHHHHHHhCCCchhHHHHHHHhhhcccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 021096 237 NLAQIGVALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCSYLRSIKLGRKCKCFLVL 300 (317)
Q Consensus 237 n~~~i~~al~~~~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r~~~~~~~~~~~~~~~~~ 300 (317)
.+.+|-+.++.++ ..+.++..++=+|-++...+-=++|.|.+.|||+ .+...++++|.++.
T Consensus 25 ~lttiErRF~l~S--~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi-g~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 25 SLTTIERRFGLSS--SQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI-GIGALLMGLGSLLF 85 (539)
T ss_dssp ----------------------------------------------------------------
T ss_pred HHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee-eecHHHHHHHHHHH
Confidence 3344444444432 3445555555555555666555778888888888 44444556665544
No 209
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=20.75 E-value=1.2e+02 Score=30.92 Aligned_cols=77 Identities=10% Similarity=0.034 Sum_probs=0.0
Q ss_pred HHHhhcchhheecchHHHHHHhCCC--chhHHHHHHHhhhcccccccchhhhhhhhhhhHHH-HHHHHHHHHHHHHHHHH
Q 021096 224 YFLGVGAGVTVLNNLAQIGVALGVN--DTTELLCLFSLCNFAGRLGSGVLSEHYVRSLLLCS-YLRSIKLGRKCKCFLVL 300 (317)
Q Consensus 224 ~~~~~g~Gl~~i~n~~~i~~al~~~--~~~~~vsl~si~n~~GRl~~G~~SD~~~r~~~~~r-~~~~~~~~~~~~~~~~~ 300 (317)
+.++...+++..+=+-..-...|.+ .+...-.+--++.++.=.++|.++||..+|++-.| |++..++....++-+..
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F 101 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLF 101 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHH
No 210
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=20.19 E-value=1.3e+02 Score=24.20 Aligned_cols=56 Identities=27% Similarity=0.251 Sum_probs=40.3
Q ss_pred CCchhHHHHHHhhhhHHHHHHHHHHHHcCC----CchHHHHHHHHHHHHHHHhheeeeeecCCC
Q 021096 7 SRGTVSGILKGYAGIAAAIYTVLYNMVLQN----SATTLLLFLALGIPLICLVTTYFIRACTPA 66 (317)
Q Consensus 7 ~RG~vvgi~k~~~GLSaaIfs~i~~~ff~~----d~~~fllfLa~~~~~v~~l~~~fir~~p~~ 66 (317)
.|+.|++|-.+.+.+|+..+..+-..=+++ ..+.-++.+. +++=++.++.|+..-.
T Consensus 2 tR~dvl~Iglgv~~~Gg~~Y~~l~~~G~d~~~AGi~sq~~lv~g----lvgW~~sYlfRV~t~~ 61 (104)
T PF11460_consen 2 TRIDVLLIGLGVFLLGGLLYGGLQAAGLDSLSAGIWSQALLVLG----LVGWVSSYLFRVVTGK 61 (104)
T ss_pred cccceeeecHHHHHHHHHHHHHHHHcCCCchhhhHHHHHHHHHH----HHHHHhHHHhhhccCC
Confidence 589999999999999999998877544433 3444444444 3667788888987643
Done!