Query 021099
Match_columns 317
No_of_seqs 350 out of 2184
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 12:43:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021099.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021099hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fxt_A Nucleoside diphosphate- 99.9 5.1E-25 1.7E-29 174.4 9.9 87 53-139 21-112 (113)
2 2fb1_A Conserved hypothetical 99.9 2.1E-23 7.3E-28 186.8 10.9 162 141-309 5-171 (226)
3 3gz5_A MUTT/nudix family prote 99.9 2E-22 6.7E-27 182.2 9.6 159 145-309 18-184 (240)
4 3i7u_A AP4A hydrolase; nudix p 99.9 1.1E-21 3.6E-26 161.6 13.0 121 148-278 3-128 (134)
5 3grn_A MUTT related protein; s 99.9 1.7E-20 5.8E-25 156.7 17.6 128 148-281 7-135 (153)
6 3gwy_A Putative CTP pyrophosph 99.9 1.5E-20 5.1E-25 154.7 16.2 124 148-276 5-130 (140)
7 3hhj_A Mutator MUTT protein; n 99.9 7.3E-21 2.5E-25 159.7 14.0 136 137-277 17-155 (158)
8 4dyw_A MUTT/nudix family prote 99.8 1.1E-20 3.9E-25 158.9 14.5 132 138-273 18-151 (157)
9 1vcd_A NDX1; nudix protein, di 99.8 1.7E-20 5.8E-25 151.0 14.3 119 149-276 2-121 (126)
10 3u53_A BIS(5'-nucleosyl)-tetra 99.8 2E-20 6.8E-25 157.0 14.2 125 151-280 5-143 (155)
11 2fml_A MUTT/nudix family prote 99.8 4.2E-20 1.4E-24 169.9 17.3 160 142-309 32-225 (273)
12 3h95_A Nucleoside diphosphate- 99.8 3E-20 1E-24 162.6 15.1 138 139-281 16-156 (199)
13 3r03_A Nudix hydrolase; struct 99.8 6.4E-20 2.2E-24 150.9 15.9 123 149-276 8-133 (144)
14 3ees_A Probable pyrophosphohyd 99.8 2.9E-20 1E-24 154.2 13.9 113 149-266 21-133 (153)
15 1ktg_A Diadenosine tetraphosph 99.8 4.8E-20 1.6E-24 150.6 14.6 124 149-278 3-134 (138)
16 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 2E-19 6.8E-24 147.6 17.7 122 145-275 5-134 (139)
17 3gg6_A Nudix motif 18, nucleos 99.8 1.1E-19 3.9E-24 151.9 16.3 114 148-266 19-133 (156)
18 2pbt_A AP4A hydrolase; nudix p 99.8 4.7E-20 1.6E-24 149.8 13.3 122 148-279 3-129 (134)
19 2w4e_A MUTT/nudix family prote 99.8 1.6E-20 5.6E-25 155.9 9.6 115 148-264 4-118 (145)
20 2rrk_A ORF135, CTP pyrophospho 99.8 1.6E-19 5.4E-24 147.7 15.2 125 148-278 8-133 (140)
21 3son_A Hypothetical nudix hydr 99.8 9.1E-20 3.1E-24 151.4 13.8 127 149-281 5-143 (149)
22 1f3y_A Diadenosine 5',5'''-P1, 99.8 4.3E-20 1.5E-24 155.1 11.8 130 148-281 13-163 (165)
23 3oga_A Nucleoside triphosphata 99.8 2E-19 7E-24 151.9 15.7 116 148-266 26-152 (165)
24 3id9_A MUTT/nudix family prote 99.8 2.7E-19 9.4E-24 152.0 16.3 120 148-272 22-145 (171)
25 3q93_A 7,8-dihydro-8-oxoguanin 99.8 2.4E-19 8.1E-24 154.0 15.9 149 148-315 24-174 (176)
26 3q1p_A Phosphohydrolase (MUTT/ 99.8 3.3E-19 1.1E-23 157.0 17.0 129 144-281 63-197 (205)
27 2fvv_A Diphosphoinositol polyp 99.8 2.8E-20 9.6E-25 162.7 9.9 151 146-305 37-189 (194)
28 3o8s_A Nudix hydrolase, ADP-ri 99.8 1.9E-19 6.6E-24 158.6 15.1 167 100-280 7-197 (206)
29 2kdv_A RNA pyrophosphohydrolas 99.8 5.5E-19 1.9E-23 150.0 17.4 132 147-283 6-155 (164)
30 2fkb_A Putative nudix hydrolas 99.8 3.2E-19 1.1E-23 152.8 15.7 127 150-282 38-167 (180)
31 2b0v_A Nudix hydrolase; struct 99.8 2.6E-19 9E-24 148.7 14.4 130 149-282 8-139 (153)
32 2yvp_A NDX2, MUTT/nudix family 99.8 2.1E-20 7.3E-25 160.7 7.9 120 145-265 37-156 (182)
33 1rya_A GDP-mannose mannosyl hy 99.8 2.6E-19 9E-24 149.8 14.3 116 147-266 16-141 (160)
34 3cng_A Nudix hydrolase; struct 99.8 7.2E-19 2.5E-23 152.6 17.5 126 145-278 36-163 (189)
35 3i9x_A MUTT/nudix family prote 99.8 8.2E-20 2.8E-24 158.1 11.3 136 150-285 28-178 (187)
36 3exq_A Nudix family hydrolase; 99.8 2E-19 7E-24 151.8 13.4 115 147-267 8-125 (161)
37 3shd_A Phosphatase NUDJ; nudix 99.8 9E-19 3.1E-23 145.8 16.4 129 148-282 4-133 (153)
38 3f6a_A Hydrolase, nudix family 99.8 2.6E-19 8.9E-24 150.5 12.5 110 149-266 6-136 (159)
39 1sjy_A MUTT/nudix family prote 99.8 8.4E-19 2.9E-23 146.6 15.6 118 147-266 11-133 (159)
40 3eds_A MUTT/nudix family prote 99.8 1.8E-19 6.2E-24 150.8 11.2 113 146-266 18-138 (153)
41 1nqz_A COA pyrophosphatase (MU 99.8 2.8E-19 9.7E-24 155.3 12.2 123 141-264 26-152 (194)
42 1mut_A MUTT, nucleoside tripho 99.8 9.2E-20 3.1E-24 146.9 7.7 118 153-275 8-126 (129)
43 2o1c_A DATP pyrophosphohydrola 99.8 8.8E-19 3E-23 144.5 13.5 111 149-266 9-135 (150)
44 1v8y_A ADP-ribose pyrophosphat 99.8 3.4E-19 1.2E-23 151.6 11.1 114 148-265 33-146 (170)
45 2azw_A MUTT/nudix family prote 99.8 7.3E-19 2.5E-23 145.1 12.1 120 146-274 15-142 (148)
46 1mk1_A ADPR pyrophosphatase; n 99.8 1.2E-19 4.2E-24 159.8 7.2 120 146-266 40-161 (207)
47 2a6t_A SPAC19A8.12; alpha/beta 99.8 4.8E-20 1.6E-24 169.4 3.1 193 55-266 12-215 (271)
48 1vhz_A ADP compounds hydrolase 99.8 3.3E-18 1.1E-22 149.9 14.7 115 149-266 49-163 (198)
49 1k2e_A Nudix homolog; nudix/MU 99.8 1.6E-18 5.3E-23 145.5 11.3 116 150-280 2-137 (156)
50 1vk6_A NADH pyrophosphatase; 1 99.8 7.8E-18 2.7E-22 154.5 16.9 128 144-281 135-262 (269)
51 1q27_A Putative nudix hydrolas 99.8 2.2E-18 7.7E-23 146.3 12.1 125 149-277 34-165 (171)
52 3fcm_A Hydrolase, nudix family 99.8 1.3E-17 4.3E-22 145.6 17.0 129 148-282 44-187 (197)
53 3fk9_A Mutator MUTT protein; s 99.8 5.1E-18 1.7E-22 147.3 14.2 108 150-266 5-117 (188)
54 2pqv_A MUTT/nudix family prote 99.8 4.1E-18 1.4E-22 142.1 12.9 111 148-266 18-132 (154)
55 1g0s_A Hypothetical 23.7 kDa p 99.8 4.1E-18 1.4E-22 150.5 13.1 120 147-266 55-182 (209)
56 1x51_A A/G-specific adenine DN 99.8 5.4E-18 1.8E-22 141.8 12.6 127 147-281 17-148 (155)
57 2b06_A MUTT/nudix family prote 99.8 4.3E-18 1.5E-22 142.0 11.9 114 146-267 5-123 (155)
58 3f13_A Putative nudix hydrolas 99.8 1.8E-17 6.2E-22 140.8 14.9 114 149-277 15-129 (163)
59 3q91_A Uridine diphosphate glu 99.8 2.3E-18 8E-23 153.3 9.8 133 132-264 19-189 (218)
60 1hzt_A Isopentenyl diphosphate 99.7 2.1E-18 7.2E-23 149.4 8.6 130 150-282 33-172 (190)
61 2jvb_A Protein PSU1, mRNA-deca 99.7 1.9E-18 6.3E-23 142.8 7.6 109 151-266 6-117 (146)
62 3o6z_A GDP-mannose pyrophospha 99.7 1.2E-17 4.2E-22 145.3 10.5 116 148-264 44-167 (191)
63 2dsc_A ADP-sugar pyrophosphata 99.7 1.6E-17 5.4E-22 146.8 11.1 104 161-265 77-185 (212)
64 2qjo_A Bifunctional NMN adenyl 99.7 5E-17 1.7E-21 152.6 14.7 129 145-276 199-338 (341)
65 2qjt_B Nicotinamide-nucleotide 99.7 9.7E-17 3.3E-21 151.6 16.4 133 144-279 203-348 (352)
66 3fjy_A Probable MUTT1 protein; 99.7 2.3E-16 8E-21 150.3 13.8 117 159-280 36-176 (364)
67 3e57_A Uncharacterized protein 99.7 5.8E-17 2E-21 143.3 6.5 110 149-263 68-188 (211)
68 3fsp_A A/G-specific adenine gl 99.7 6.8E-16 2.3E-20 147.6 13.6 118 149-275 240-358 (369)
69 2dho_A Isopentenyl-diphosphate 99.6 7.7E-15 2.6E-19 132.0 14.3 111 150-263 60-190 (235)
70 2pny_A Isopentenyl-diphosphate 99.6 8.9E-15 3E-19 132.4 13.0 111 150-263 71-201 (246)
71 1u20_A U8 snoRNA-binding prote 99.6 1.7E-15 5.8E-20 134.0 7.9 105 152-263 47-165 (212)
72 1q33_A Pyrophosphatase, ADP-ri 99.5 1.3E-13 4.6E-18 127.7 13.7 113 162-280 140-278 (292)
73 3dup_A MUTT/nudix family prote 99.5 3.5E-13 1.2E-17 125.0 16.4 177 65-263 53-242 (300)
74 3qsj_A Nudix hydrolase; struct 99.4 1.6E-12 5.3E-17 116.6 13.0 113 148-261 7-186 (232)
75 2xsq_A U8 snoRNA-decapping enz 99.4 4.9E-13 1.7E-17 118.7 8.4 95 162-262 66-172 (217)
76 3rh7_A Hypothetical oxidoreduc 99.3 1.2E-11 4.3E-16 115.8 11.6 111 148-282 182-293 (321)
77 3kvh_A Protein syndesmos; NUDT 99.0 2.9E-10 1E-14 97.9 4.9 94 162-262 45-148 (214)
78 3bho_A Cleavage and polyadenyl 99.0 5E-09 1.7E-13 91.1 12.1 62 149-216 58-128 (208)
79 3fix_A N-acetyltransferase; te 33.1 1E+02 0.0034 23.9 6.5 52 81-132 129-180 (183)
80 1wwz_A Hypothetical protein PH 27.4 1.2E+02 0.0042 23.0 6.0 51 83-134 106-156 (159)
81 2oh1_A Acetyltransferase, GNAT 23.1 1.9E+02 0.0065 21.7 6.4 52 82-133 123-174 (179)
82 4ava_A Lysine acetyltransferas 22.9 1.5E+02 0.0051 25.9 6.3 55 82-136 252-306 (333)
83 2fia_A Acetyltransferase; stru 22.7 2E+02 0.007 20.9 6.4 44 81-124 94-137 (162)
84 3lod_A Putative acyl-COA N-acy 21.8 2.3E+02 0.0077 20.8 6.5 47 81-127 93-139 (162)
85 1mk4_A Hypothetical protein YQ 21.4 2E+02 0.007 21.0 6.1 44 81-124 87-130 (157)
86 3eo4_A Uncharacterized protein 21.3 1.9E+02 0.0064 21.6 5.9 51 81-131 109-159 (164)
No 1
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=99.92 E-value=5.1e-25 Score=174.36 Aligned_cols=87 Identities=31% Similarity=0.703 Sum_probs=81.5
Q ss_pred cccceeccccCCCcEEEec-----CCCCCHHHHHHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCc
Q 021099 53 VNKFLNGINDNYGGVVVQM-----NEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPN 127 (317)
Q Consensus 53 ~~~~~~~~~d~~~gv~v~~-----~~~~~~~~f~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~ 127 (317)
...+|+|..|+||||+|+. ..++|+++|.+.|++||++|+++++++|||+||+.+++++++|+++||.||||+++
T Consensus 21 ~~~~l~g~~DrygGV~Vd~~~l~~~~~~d~~~F~~~L~~SL~~Wr~~gk~~IWlklpi~~s~lIp~a~~~GF~fHHAe~d 100 (113)
T 3fxt_A 21 QSMDLQGELDRFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAESD 100 (113)
T ss_dssp CCCCCCCEECTTSCEEEEHHHHTTTSCBCHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGGGHHHHHHTTCEEEEEEBT
T ss_pred ccccccCCccCcCCEEEeCCccCCcCcCCHHHHHHHHHHHHHHHHHcCCeeEEEEcCHHHhhhHHHHHHcCceeecCCCC
Confidence 4789999999999999987 34789999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCC
Q 021099 128 YLMLVYWIPGGA 139 (317)
Q Consensus 128 ~~~l~~wl~~~~ 139 (317)
|+||++|||+++
T Consensus 101 ylmL~~WLpe~p 112 (113)
T 3fxt_A 101 SSTLTLWLREGP 112 (113)
T ss_dssp EEEEEEECCC--
T ss_pred eEEEEEecCcCC
Confidence 999999999876
No 2
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.89 E-value=2.1e-23 Score=186.83 Aligned_cols=162 Identities=17% Similarity=0.301 Sum_probs=130.1
Q ss_pred CCCCCCcceeEEEEEEE---eCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEE
Q 021099 141 TLPANASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 217 (317)
Q Consensus 141 ~~p~~~~~~v~v~~iv~---~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~ 217 (317)
..+.+..+.++|+++|+ +++++|||++|...+ ..|.|.+|||++|+||++.+||+||++||||+.+...+.++.+
T Consensus 5 ~~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~--~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~ 82 (226)
T 2fb1_A 5 YYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEP--AMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAF 82 (226)
T ss_dssp TTTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSS--STTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEE
T ss_pred ccccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCC--CCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEe
Confidence 34556777889999998 456899999998754 3589999999999999999999999999999999988888776
Q ss_pred ecccCC--CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhccccCCCCCCCcCC
Q 021099 218 QSHQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDTRGYHGFSPVP 295 (317)
Q Consensus 218 ~~~~~~--~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~~~~~~~~g~~~~~ 295 (317)
...... .....++|+|.+... ....+++|+.+++|++++++.++.+++ ..++..+++++.+++.. .+.+|.++|
T Consensus 83 ~~~~r~~~~~~v~~~y~a~~~~~--~~~~~~~e~~~~~W~~~~el~~l~~dh-~~il~~a~~rlr~~~~y-~~i~~~llp 158 (226)
T 2fb1_A 83 GAIDRDPGERVVSIAYYALININ--EYDRELVQKHNAYWVNINELPALIFDH-PEMVDKAREMMKQKASV-EPIGFNLLP 158 (226)
T ss_dssp CCTTSSSSSCEEEEEEEEECCTT--SSCHHHHHHTTEEEEETTSCCCBSTTH-HHHHHHHHHHHHHHHHH-SGGGGGGSC
T ss_pred CCCCcCCCceEEEEEEEEEecCc--ccccCCccccceEEEEHHHhhhccCCH-HHHHHHHHHHHHhhccc-CchHHHhCC
Confidence 543322 233455677765432 222345788999999999999988875 68999999999999988 899999999
Q ss_pred CccccCCCceeeee
Q 021099 296 TTSAFSDKKHYFYL 309 (317)
Q Consensus 296 ~~~~~~~~~~~~y~ 309 (317)
+.|+++ +...+|.
T Consensus 159 ~~ftl~-~l~~~ye 171 (226)
T 2fb1_A 159 KLFTLS-QLQSLYE 171 (226)
T ss_dssp SEEEHH-HHHHHHH
T ss_pred ccccHH-HHHHHHH
Confidence 999987 6666665
No 3
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.87 E-value=2e-22 Score=182.17 Aligned_cols=159 Identities=16% Similarity=0.243 Sum_probs=123.3
Q ss_pred CCcceeEEEEEEE---eCCceEEEEEecCCCCCCCCcEEcceeecCC--CCCHHHHHHHHHHHHhCCccceeEEEEEEec
Q 021099 145 NASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDE--GEDICVAAVREVKEETSIDTEFVEVLAFRQS 219 (317)
Q Consensus 145 ~~~~~v~v~~iv~---~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~--GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~ 219 (317)
+..+.++|+++|+ +++++|||++|...+ ..|.|.+|||++|+ ||++.+||+||++||||+++.....++.+..
T Consensus 18 ~~~p~v~v~~vi~~~~~~~~~vLLv~R~~~~--~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~ 95 (240)
T 3gz5_A 18 FKAQLLTVDAVLFTYHDQQLKVLLVQRSNHP--FLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGN 95 (240)
T ss_dssp ---CEEEEEEEEEEEETTEEEEEEEECCSSS--STTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEE
T ss_pred cCCCccEEEEEEEEEeCCCcEEEEEECcCCC--CCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeCC
Confidence 4455678888887 345799999998755 35899999999999 9999999999999999999998888876655
Q ss_pred ccCC--CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHHhccccCCCCCCCcCCC
Q 021099 220 HQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSAKVDTRGYHGFSPVPT 296 (317)
Q Consensus 220 ~~~~--~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l~~~~~~~~~g~~~~~~ 296 (317)
.... .....++|+|.+... ....+.+|+.+++|++++++...++. ....++..+++++..++.. .+++|.++|+
T Consensus 96 ~~r~~~~~~~~~~y~a~~~~~--~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl~y-~~i~~~llp~ 172 (240)
T 3gz5_A 96 NSRDARGWSVTVCYTALMSYQ--ACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKALY-SLVPGFALSE 172 (240)
T ss_dssp SSSSTTSCEEEEEEEEECCHH--HHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHHHH-CSGGGGGSCS
T ss_pred CccCCCceEEEEEEEEEeccc--ccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhccc-CcHHHHhCCC
Confidence 3322 334566777755432 22224578889999999999864444 3478999999999999999 8999999999
Q ss_pred ccccCCCceeeee
Q 021099 297 TSAFSDKKHYFYL 309 (317)
Q Consensus 297 ~~~~~~~~~~~y~ 309 (317)
.|+++ +...+|.
T Consensus 173 ~Ftl~-~l~~~ye 184 (240)
T 3gz5_A 173 PFTLP-ELQHVHE 184 (240)
T ss_dssp SBCHH-HHHHHHH
T ss_pred CccHH-HHHHHHH
Confidence 99987 6666665
No 4
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.87 E-value=1.1e-21 Score=161.63 Aligned_cols=121 Identities=22% Similarity=0.414 Sum_probs=90.2
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC----
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF---- 223 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~---- 223 (317)
..+++|++|++ +++|||++|.. |.|.||||++|+|||+.+||+||++||||+.++....++........
T Consensus 3 ~~~aag~vv~~-~~~vLL~~r~~------g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~ 75 (134)
T 3i7u_A 3 KEFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGER 75 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEE
T ss_pred cEEEEEEEEEE-CCEEEEEEeCC------CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCce
Confidence 45788888887 58999999752 78999999999999999999999999999999888887654432221
Q ss_pred CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHH
Q 021099 224 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDI 278 (317)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~ 278 (317)
.....++|+|..... ++. .++|+.+++|++++|+.++... .++.+++.+++.
T Consensus 76 ~~~~~~~f~~~~~~~--~~~-~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l 128 (134)
T 3i7u_A 76 IFKTVKYYLMKYKEG--EPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKL 128 (134)
T ss_dssp EEEEEEEEEEEEEEE--CCC-CCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEEcCC--cCc-CChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHH
Confidence 223456777765432 332 3478999999999999886543 445666655543
No 5
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.86 E-value=1.7e-20 Score=156.66 Aligned_cols=128 Identities=20% Similarity=0.225 Sum_probs=99.9
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceE
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 227 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~ 227 (317)
..++|+++|++.+++|||++|.......+|.|.||||++|+||++.+||+||++||||+.+....+++............
T Consensus 7 ~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 86 (153)
T 3grn_A 7 YIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKKVI 86 (153)
T ss_dssp EEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSSCEEE
T ss_pred eEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEEEecCCceEE
Confidence 46788889998889999999987522346999999999999999999999999999999999888888777666555666
Q ss_pred EEEEEEEEccCCccccCCccceeeEEEEeccccccCC-CCccHHHHHHHHHHHHh
Q 021099 228 DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQP-YVQNQELLKYIVDICSA 281 (317)
Q Consensus 228 ~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~-~~~~~~ii~~~~~~~l~ 281 (317)
.++|.|..... .+. ...|..+++|++++++.+++ ++ +.++.+++.+.+
T Consensus 87 ~~~~~~~~~~~--~~~-~~~e~~~~~W~~~~el~~~~~~~---~~~~~~l~~l~~ 135 (153)
T 3grn_A 87 AIVFDGGYVVA--DVK-LSYEHIEYSWVSLEKILGMETLP---AYFRDFFERFDR 135 (153)
T ss_dssp EEEEEEEECCC--CCC-CCTTEEEEEEECHHHHTTCSSSC---HHHHHHHHHHHH
T ss_pred EEEEEEEecCC--cEe-cCCCcceEEEEEHHHhhhcccch---HHHHHHHHHHhc
Confidence 77777755432 222 24788999999999999998 64 334445554444
No 6
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.85 E-value=1.5e-20 Score=154.68 Aligned_cols=124 Identities=27% Similarity=0.295 Sum_probs=94.5
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCC-CCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCce
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFR-GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEK 226 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~-~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~ 226 (317)
+...++++|.+ +++|||++|...+.. .+|.|.||||++|+||++.+||+||++||||+.+.....++...........
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~ 83 (140)
T 3gwy_A 5 SIEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEI 83 (140)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSCCE
T ss_pred EEEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCceE
Confidence 34456666776 789999999876530 2589999999999999999999999999999999999988887776666677
Q ss_pred EEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHH
Q 021099 227 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIV 276 (317)
Q Consensus 227 ~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~ 276 (317)
..++|.|..... . .+..|..+++|++++++.++++. ..+++++.+.
T Consensus 84 ~~~~f~~~~~~~--~--~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~ 130 (140)
T 3gwy_A 84 TMHAFLCHPVGQ--R--YVLKEHIAAQWLSTREMAILDWAEADKPIVRKIS 130 (140)
T ss_dssp EEEEEEEEECCS--C--CCCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHH
T ss_pred EEEEEEEEecCC--c--ccccccceeEeccHHHHhhCCCCcccHHHHHHHH
Confidence 778888876432 2 33578899999999999999887 4555555543
No 7
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.85 E-value=7.3e-21 Score=159.71 Aligned_cols=136 Identities=21% Similarity=0.418 Sum_probs=96.3
Q ss_pred CCCCCCCCCCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEE--E
Q 021099 137 GGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEV--L 214 (317)
Q Consensus 137 ~~~~~~p~~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~--l 214 (317)
.++...+........++++|++.+++|||++|.....+ +|.|+||||++|+||++.+||+||++||||+.+....+ +
T Consensus 17 ~gP~~~~~~~~~~~~~~~~i~~~~~~vLL~~r~~~~~~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 95 (158)
T 3hhj_A 17 QGPGSMPIKSSLLIVVACALLDQDNRVLLTQRPEGKSL-AGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPL 95 (158)
T ss_dssp ----------CEEEEEEEEEBCTTSEEEEEECCCTTSC-CCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred CCCccCCCCCceEEEEEEEEEeCCCEEEEEEeCCCCCC-CCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEE
Confidence 44555665556666777788888899999999866553 59999999999999999999999999999999877644 4
Q ss_pred EEEecccCCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHH
Q 021099 215 AFRQSHQSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVD 277 (317)
Q Consensus 215 ~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~ 277 (317)
+...+..........+|.|.... . ..+..|..+++|++++++.+++++ ....++..+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~ 155 (158)
T 3hhj_A 96 TFASHGYETFHLLMPLYFCSHYK--G--VAQGREGQNLKWIFINDLDKYPMPEADKPLVQVLKN 155 (158)
T ss_dssp EEEEEECSSCEEEEEEEEESCCB--S--CCCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHH
T ss_pred EEEeeccCCcEEEEEEEEEEECC--C--ccCCccccceEEEcHHHHhhCCCCcchHHHHHHHHH
Confidence 44444444455566677664322 2 244578899999999999999887 45566655544
No 8
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.85 E-value=1.1e-20 Score=158.91 Aligned_cols=132 Identities=21% Similarity=0.294 Sum_probs=94.8
Q ss_pred CCCCCCCCCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEE
Q 021099 138 GANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 217 (317)
Q Consensus 138 ~~~~~p~~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~ 217 (317)
++..++....++++|+++|++ +++|||++|.+.+ ..+.|.||||++|+||++.+||+||++||||+.+....+++..
T Consensus 18 ~p~~m~~~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 94 (157)
T 4dyw_A 18 GPGSMQHTEQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVV 94 (157)
T ss_dssp --------CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEE
T ss_pred CCCCCCCCCCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEE
Confidence 345555566778899999998 7899999998765 4689999999999999999999999999999999888888776
Q ss_pred ecccC--CCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHH
Q 021099 218 QSHQS--FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLK 273 (317)
Q Consensus 218 ~~~~~--~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~ 273 (317)
..... ......++|.|...... ....+++|+.+++|++++++.+...+....+++
T Consensus 95 ~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~l~~~~~~~l~ 151 (157)
T 4dyw_A 95 DHIDAANGEHWVAPVYLAHAFSGE-PRVVEPDRHEALGWFALDDLPQPLTHATRIALE 151 (157)
T ss_dssp EEEETTTTEEEEEEEEEESEEESC-CCCSCTTTEEEEEEEETTSCCSSBCHHHHHHHH
T ss_pred EeeccCCCcEEEEEEEEEEEcCCC-cccCCCCcEeEEEEECHHHcccccCHHHHHHHH
Confidence 65543 23445567777543322 222355889999999999999843323334333
No 9
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.85 E-value=1.7e-20 Score=151.00 Aligned_cols=119 Identities=30% Similarity=0.444 Sum_probs=93.3
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEE
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 228 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 228 (317)
.+++++++++++++|||++|.. |.|.+|||++|+||++.+||+||++||||+.+.....++...+.........
T Consensus 2 ~~~~~~vi~~~~~~vLl~~r~~------g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 75 (126)
T 1vcd_A 2 ELGAGGVVFNAKREVLLLRDRM------GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVERE 75 (126)
T ss_dssp EEEEEEEEECTTSCEEEEECTT------SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCEEE
T ss_pred eeEEEEEEEcCCCEEEEEEECC------CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceEEE
Confidence 4688999999889999999874 6799999999999999999999999999999988888877655444455566
Q ss_pred EEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHH
Q 021099 229 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIV 276 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~ 276 (317)
.+|.|...... ..++.|+.+++|++++++.++... ..+++++.+.
T Consensus 76 ~~~~~~~~~~~---~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~ 121 (126)
T 1vcd_A 76 VHWFLMRGEGA---PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVAL 121 (126)
T ss_dssp EEEEEEEEESC---CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHH
T ss_pred EEEEEEEcCCC---CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHH
Confidence 77777554332 245578899999999999987654 3345444443
No 10
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.84 E-value=2e-20 Score=156.98 Aligned_cols=125 Identities=24% Similarity=0.364 Sum_probs=91.4
Q ss_pred EEEEEEE---------eCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEec--
Q 021099 151 GVGAFVM---------NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS-- 219 (317)
Q Consensus 151 ~v~~iv~---------~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~-- 219 (317)
++|++|+ |++.++||+||..+ ++.|.||||++|+|||+.+||+||++||||+.+.....+.....
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 80 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKREL 80 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEE
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeee
Confidence 5777887 45689999999863 47899999999999999999999999999999988777644322
Q ss_pred --ccCCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHH
Q 021099 220 --HQSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 280 (317)
Q Consensus 220 --~~~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l 280 (317)
..........+|++........+ ..++|+.+++|++++|+.++... ..+.+++.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~ 143 (155)
T 3u53_A 81 NYVARNKPKTVIYWLAEVKDYDVEI-RLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLC 143 (155)
T ss_dssp EEEETTEEEEEEEEEEEESCTTCCC-CCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHH
T ss_pred ecCCCcceeEEEEEEEEEeccCCcc-CCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 12223344566666665444333 34578999999999999876543 44566666655544
No 11
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.84 E-value=4.2e-20 Score=169.90 Aligned_cols=160 Identities=16% Similarity=0.220 Sum_probs=121.2
Q ss_pred CCCCCcceeEEEEEEEe--C---CceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccce--eEEE
Q 021099 142 LPANASHRVGVGAFVMN--G---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEF--VEVL 214 (317)
Q Consensus 142 ~p~~~~~~v~v~~iv~~--~---~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~--~~~l 214 (317)
.+.+..+.++|+++|+. + +++|||++|...+ ..|.|.+|||++|+||++.+||+||++||||+.+.. ...+
T Consensus 32 ~~~~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p--~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l 109 (273)
T 2fml_A 32 LPEYEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHP--FRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQL 109 (273)
T ss_dssp CCCCCCCEEEEEEEEEEEETTTTEEEEEEEEECSSS--STTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred cccCCCCceEEEEEEEEEcCCCCCcEEEEEEccCCC--CCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEE
Confidence 44567777888888875 2 3599999998765 358999999999999999999999999999976543 4445
Q ss_pred EEEecccCC--CceEEEEEEEEEccCCccccCCccceeeEEEEeccccc-------------------------cCCCCc
Q 021099 215 AFRQSHQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYA-------------------------AQPYVQ 267 (317)
Q Consensus 215 ~~~~~~~~~--~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~-------------------------~~~~~~ 267 (317)
..+...... .....++|+|.+.... ....+|..+++|++++++. .+.+++
T Consensus 110 ~~~~~~~r~~~~~~~~~~y~a~~~~~~---~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~LafdH 186 (273)
T 2fml_A 110 HSFSRPDRDPRGWVVTVSYLAFIGEEP---LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDH 186 (273)
T ss_dssp EEECCTTSSTTSSEEEEEEEEECCCCC---CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTTH
T ss_pred EEEcCCCCCCCceEEEEEEEEEeCCCC---CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCCcccccH
Confidence 444332221 2345677777654322 3456889999999999742 334444
Q ss_pred cHHHHHHHHHHHHhccccCCCCCCCcCCCccccCCCceeeee
Q 021099 268 NQELLKYIVDICSAKVDTRGYHGFSPVPTTSAFSDKKHYFYL 309 (317)
Q Consensus 268 ~~~ii~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~y~ 309 (317)
..++...++++.+++.. .+.+|.++|+.|+++ +...+|.
T Consensus 187 -~~Il~~al~rlr~kl~y-~~i~~~llp~~FTl~-~l~~~ye 225 (273)
T 2fml_A 187 -SEIIIKAFNRVVDKMEH-EPQVLQVLGKDFTIT-EARKVFA 225 (273)
T ss_dssp -HHHHHHHHHHHHHHTTT-CCGGGGGGCSCBCHH-HHHHHHH
T ss_pred -HHHHHHHHHHHHHHhcC-CcHHHHhCCccccHH-HHHHHHH
Confidence 67899999999999999 999999999999987 6777774
No 12
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.84 E-value=3e-20 Score=162.65 Aligned_cols=138 Identities=38% Similarity=0.601 Sum_probs=97.0
Q ss_pred CCCCCCCCcceeEEEEEEEeC-CceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEE
Q 021099 139 ANTLPANASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 217 (317)
Q Consensus 139 ~~~~p~~~~~~v~v~~iv~~~-~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~ 217 (317)
....+.++.+.++|+++|++. +++|||+|++.. ..|.|.+|||++|+||++.+||+||++||||+.+....++++.
T Consensus 16 ~~~~~~~~~~~v~v~~~v~~~~~~~vLL~~r~~~---~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~ 92 (199)
T 3h95_A 16 ENLYFQSMSHQVGVAGAVFDESTRKILVVQDRNK---LKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIR 92 (199)
T ss_dssp ----------CCEEEEEEEETTTTEEEEEEESSS---STTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_pred cccccccCcccceEEEEEEeCCCCEEEEEEEcCC---CCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEE
Confidence 344566778899999999985 489999998753 2589999999999999999999999999999999888887754
Q ss_pred eccc--CCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHh
Q 021099 218 QSHQ--SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 281 (317)
Q Consensus 218 ~~~~--~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~ 281 (317)
.... ........+|+|.+.........+++|+.+++|++++++.++... .++...+.+.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~--~~~~~~~~~~~~~ 156 (199)
T 3h95_A 93 QQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENT--TPITSRVARLLLY 156 (199)
T ss_dssp ECC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSB--CHHHHHHHHHHHH
T ss_pred eeecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhc--ChHHHHHHHHHHh
Confidence 3222 223445677777766555566677899999999999999987643 3455555555444
No 13
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.84 E-value=6.4e-20 Score=150.94 Aligned_cols=123 Identities=24% Similarity=0.364 Sum_probs=92.8
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeE--EEEEEecccCCCce
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVE--VLAFRQSHQSFFEK 226 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~--~l~~~~~~~~~~~~ 226 (317)
...+++++++.+++|||++|..... .+|.|+||||++|+||++.+||+||++||||+.+.... .+....+.......
T Consensus 8 ~~~~~~vi~~~~~~vLl~~r~~~~~-~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 86 (144)
T 3r03_A 8 LLVTAAALIDPDGRVLLAQRPPGKS-LAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTFHL 86 (144)
T ss_dssp EEEEEEEEBCTTSCEEEEECCTTSS-STTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSEE
T ss_pred eEEEEEEEEcCCCEEEEEEeCCCCC-CCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCeEE
Confidence 4456677788889999999987655 35999999999999999999999999999999987763 33444444455556
Q ss_pred EEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHH
Q 021099 227 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIV 276 (317)
Q Consensus 227 ~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~ 276 (317)
...+|.|..... ..+..|..+++|++++++.+++++ ..+++++.+.
T Consensus 87 ~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 133 (144)
T 3r03_A 87 LMPLYACRSWRG----RATAREGQTLAWVRAERLREYPMPPADLPLIPILQ 133 (144)
T ss_dssp EEEEEEECCCBS----CCCCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHH
T ss_pred EEEEEEEEecCC----ccCCCCcceEEEEeHHHhccCCCCcchHHHHHHHh
Confidence 667777754322 234578889999999999999987 3445454443
No 14
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.84 E-value=2.9e-20 Score=154.17 Aligned_cols=113 Identities=22% Similarity=0.255 Sum_probs=90.3
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEE
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 228 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 228 (317)
.+.++++|++.+++|||++|..... .+|.|.||||++|+||++.+||+||++||||+.+....+++...+.........
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~~-~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 99 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENNS-LAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGILI 99 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTST-TTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEEEE
T ss_pred eEEEEEEEEEECCEEEEEEeCCCCC-CCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeEEE
Confidence 4455566666679999999987654 359999999999999999999999999999999988888877666655555556
Q ss_pred EEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 229 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
++|.|..... ..+..|..+++|++++++.++++.
T Consensus 100 ~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~ 133 (153)
T 3ees_A 100 LFYEILYWKG----EPRAKHHMMLEWIHPEELKHRNIP 133 (153)
T ss_dssp EEEEECEEES----CCCCSSSSEEEEECGGGGGGSCCC
T ss_pred EEEEEEECCC----CcCCCccceEEEecHHHhhhCCCC
Confidence 6777754322 244678899999999999999886
No 15
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.84 E-value=4.8e-20 Score=150.63 Aligned_cols=124 Identities=27% Similarity=0.289 Sum_probs=90.9
Q ss_pred eeEEEEEEEeC---CceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEE----EEEeccc
Q 021099 149 RVGVGAFVMNG---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL----AFRQSHQ 221 (317)
Q Consensus 149 ~v~v~~iv~~~---~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l----~~~~~~~ 221 (317)
..+++++++++ +++|||++|+. +++.|.+|||++|+||++.+||+||++||||+.++...++ +......
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 78 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEA 78 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEe
Confidence 45788888874 47899999973 3579999999999999999999999999999976555544 2222222
Q ss_pred CCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHH
Q 021099 222 SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDI 278 (317)
Q Consensus 222 ~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~ 278 (317)
...+...++|+|..... ....+++|+.+++|++++++.++... ....+++.+.+.
T Consensus 79 ~~~~~~~~~f~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 134 (138)
T 1ktg_A 79 KGKPKSVKYWLAKLNNP--DDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAF 134 (138)
T ss_dssp TTEEEEEEEEEEEECSC--CCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEEEecCC--cccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHH
Confidence 23455677888876542 22356789999999999999997765 344555555544
No 16
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.83 E-value=2e-19 Score=147.59 Aligned_cols=122 Identities=15% Similarity=0.222 Sum_probs=93.7
Q ss_pred CCcceeEEEEEEEe--CCce--EEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecc
Q 021099 145 NASHRVGVGAFVMN--GKRE--VLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSH 220 (317)
Q Consensus 145 ~~~~~v~v~~iv~~--~~g~--VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~ 220 (317)
+..+.++++++|++ ++++ |||++|...+ +.|++|||++|+||++.+||+||++||||+.+....+++.....
T Consensus 5 y~~p~~~v~~vi~~~~~~~~~~vLl~~r~~~~----~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 80 (139)
T 2yyh_A 5 VKTPLLATDVIIRLWDGENFKGIVLIERKYPP----VGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSDP 80 (139)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEEECSSS----CSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCT
T ss_pred ccCCeEEEEEEEEEEcCCCcEEEEEEEecCCC----CcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCC
Confidence 45667888888887 6777 9999998643 34999999999999999999999999999999888888776653
Q ss_pred cC--CCceEEEEEEEEEccCCccccCCccceeeEEEEeccccc--cCCCCccHHHHHHH
Q 021099 221 QS--FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYA--AQPYVQNQELLKYI 275 (317)
Q Consensus 221 ~~--~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~--~~~~~~~~~ii~~~ 275 (317)
.. ......++|.|... . .+ ..++|+.+++|++++++. .+.+++ .+++..+
T Consensus 81 ~~~~~~~~~~~~f~~~~~-~--~~-~~~~e~~~~~W~~~~el~~~~l~~~~-~~~l~~~ 134 (139)
T 2yyh_A 81 ERDPRAHVVSVVWIGDAQ-G--EP-KAGSDAKKVKVYRLEEIPLDKLVFDH-KKIILDF 134 (139)
T ss_dssp TSCTTSCEEEEEEEEEEE-S--CC-CCCTTEEEEEEECTTSCCGGGBCTTH-HHHHHHH
T ss_pred CcCCCceEEEEEEEEecC-C--cc-CCCCCcceEEEEEHHHCCHhhcCCCH-HHHHHHH
Confidence 22 13456778888762 2 22 246789999999999999 777763 4444443
No 17
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.1e-19 Score=151.93 Aligned_cols=114 Identities=25% Similarity=0.331 Sum_probs=91.2
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceE
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 227 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~ 227 (317)
....+++++++++++|||+++.+.+ ..|.|.+|||++|+||++.+||+||++||||+.+....+++..... .+..
T Consensus 19 ~~~~v~~~i~~~~~~vLl~~r~~~~--~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~---~~~~ 93 (156)
T 3gg6_A 19 VCYVVLAVFLSEQDEVLLIQEAKRE--CRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERG---PSWV 93 (156)
T ss_dssp CEEEEEEECBCTTSEEEEEECCCTT--STTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEESS---TTEE
T ss_pred eEEEEEEEEEeCCCEEEEEEecCCC--CCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcCC---CCEE
Confidence 3456777788888999999998755 4689999999999999999999999999999999999888877643 3456
Q ss_pred EEEEEEEEccCCccc-cCCccceeeEEEEeccccccCCCC
Q 021099 228 DIFFLCMLRPLSFDI-QKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 228 ~~~f~~~l~~~~~~~-~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.++|+|......... ..+++|+.+++|++++++.++...
T Consensus 94 ~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (156)
T 3gg6_A 94 RFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRA 133 (156)
T ss_dssp EEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSC
T ss_pred EEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccc
Confidence 678888654332222 235588999999999999987665
No 18
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.83 E-value=4.7e-20 Score=149.78 Aligned_cols=122 Identities=22% Similarity=0.385 Sum_probs=92.4
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccC----C
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS----F 223 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~----~ 223 (317)
...+|+++|++ +++|||++|.. |.|.+|||++|+||++.+||+||++||||+.+.....++....... .
T Consensus 3 ~~~~~~~vi~~-~~~vLl~~r~~------~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 75 (134)
T 2pbt_A 3 KEFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGER 75 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEE
T ss_pred cceEEEEEEEE-CCEEEEEEeCC------CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCcE
Confidence 35678888888 67999999973 7899999999999999999999999999999988888866544333 2
Q ss_pred CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHH
Q 021099 224 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDIC 279 (317)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~ 279 (317)
.....++|.|..... ....++ |+.+++|++++++.++... ....++..+++.+
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~-e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~ 129 (134)
T 2pbt_A 76 IFKTVKYYLMKYKEG--EPRPSW-EVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLK 129 (134)
T ss_dssp EEEEEEEEEEEEEEE--CCCCCT-TSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEecCC--CcCCCc-ceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHh
Confidence 334566777765432 222333 8999999999999997765 4456666655543
No 19
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.82 E-value=1.6e-20 Score=155.91 Aligned_cols=115 Identities=20% Similarity=0.100 Sum_probs=82.9
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceE
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 227 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~ 227 (317)
++.+|++++++.+++|||+++++.+. +.+.|+||||++|+||++.+||+||++||||+.+.....++............
T Consensus 4 ~~~~v~vi~~~~~~~vLLv~~~r~~~-~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 82 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEAVLIRQFRYPL-RATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFYPQPSISGVV 82 (145)
T ss_dssp CCEEEEEEEEETTSEEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCCCE
T ss_pred eCCEEEEEEEcCCCEEEEEEEEecCC-CCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccCce
Confidence 45688889999889999987665432 34689999999999999999999999999999998777776544433334455
Q ss_pred EEEEEEEEccCCccccCCccceeeEEEEeccccccCC
Q 021099 228 DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQP 264 (317)
Q Consensus 228 ~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~ 264 (317)
.++|+|..... .....+++|+.+++|++++++.++.
T Consensus 83 ~~~f~~~~~~~-~~~~~~~~E~~~~~w~~~~el~~~~ 118 (145)
T 2w4e_A 83 FYPLLALGVTL-GAAQLEDTETIERVVLPLAEVYRML 118 (145)
T ss_dssp EEEEEEEEEEE-C--------CEEEEEEEHHHHHHHH
T ss_pred EEEEEEEeccc-CCCCCCCCCeEEEEEEeHHHHHHHH
Confidence 67777753221 2344567889999999999998754
No 20
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.82 E-value=1.6e-19 Score=147.70 Aligned_cols=125 Identities=24% Similarity=0.237 Sum_probs=93.4
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceE
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 227 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~ 227 (317)
+...+++ |++.+++|||++|...+.+ +|.|+||||++++||++.+||+||++||||+.+.....++...+........
T Consensus 8 ~~~~~~~-ii~~~~~vLl~~r~~~~~~-~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 85 (140)
T 2rrk_A 8 MIEVVAA-IIERDGKILLAQRPAQSDQ-AGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIH 85 (140)
T ss_dssp EEEEEEE-EEEETTEEEEEECCSSCSC-CCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEE
T ss_pred cceEEEE-EEEcCCEEEEEEcCCCCCC-CCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEE
Confidence 3333444 4466789999999765543 6999999999999999999999999999999998888887665555444455
Q ss_pred EEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHH
Q 021099 228 DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDI 278 (317)
Q Consensus 228 ~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~ 278 (317)
..+|.|..... . .+..|+.+++|++++++.+++++ ...++++.+.+.
T Consensus 86 ~~~~~~~~~~~--~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 133 (140)
T 2rrk_A 86 LHAWHVPDFHG--T--LQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMAL 133 (140)
T ss_dssp EEEEEESEEEE--C--CCCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHH
T ss_pred EEEEEEEeeCC--C--cCCCccceeEEeCHHHHhhCCCChhHHHHHHHHHHH
Confidence 66777644321 1 34567889999999999999887 455666665543
No 21
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.82 E-value=9.1e-20 Score=151.38 Aligned_cols=127 Identities=17% Similarity=0.223 Sum_probs=90.5
Q ss_pred eeEEEEEEE---eCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeE--EEEEEec---c
Q 021099 149 RVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVE--VLAFRQS---H 220 (317)
Q Consensus 149 ~v~v~~iv~---~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~--~l~~~~~---~ 220 (317)
+++|+++++ +++++|||++|.. .|.|.+|||++|+||++.+||+||++||||+++.... +...... .
T Consensus 5 ~~~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 79 (149)
T 3son_A 5 PFQVLVIPFIKTEANYQFGVLHRTD-----ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFH 79 (149)
T ss_dssp CCEEEEEEEEECSSSEEEEEEEESS-----SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGG
T ss_pred ceEEEEEEEEecCCCeEEEEEEEcC-----CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeeccccee
Confidence 456666665 4668999999985 3889999999999999999999999999999987642 2222111 1
Q ss_pred ---cCCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHHh
Q 021099 221 ---QSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSA 281 (317)
Q Consensus 221 ---~~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l~ 281 (317)
........++|.|........+.. ++|+.+++|++++++.++... .++.++..+.+.+..
T Consensus 80 ~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 143 (149)
T 3son_A 80 FSFNKPYVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKN 143 (149)
T ss_dssp TCSSSCSEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred eccCCceEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 111334566788866533334444 589999999999999998765 455666666555443
No 22
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.82 E-value=4.3e-20 Score=155.09 Aligned_cols=130 Identities=22% Similarity=0.341 Sum_probs=94.9
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEE--EecccC---
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAF--RQSHQS--- 222 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~--~~~~~~--- 222 (317)
.+.+++++|++.+++|||++|... +|.|.+|||++|+||++.+||+||++||||+.+........ ......
T Consensus 13 ~~~~v~~~i~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 88 (165)
T 1f3y_A 13 YRRNVGICLMNNDKKIFAASRLDI----PDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKV 88 (165)
T ss_dssp CCCEEEEEEECTTSCEEEEEETTE----EEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHH
T ss_pred eeeeEEEEEECCCCcEEEEecCCC----CCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccc
Confidence 456788889998899999999742 48999999999999999999999999999998753221110 111100
Q ss_pred -----------CCceEEEEEEEEEccCCccccC-----CccceeeEEEEeccccccCCCCccHHHHHHHHHHHHh
Q 021099 223 -----------FFEKSDIFFLCMLRPLSFDIQK-----QESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 281 (317)
Q Consensus 223 -----------~~~~~~~~f~~~l~~~~~~~~~-----~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~ 281 (317)
..+....+|++........+.. +++|+.+++|++++++.++..+...++++.+++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l~~ 163 (165)
T 1f3y_A 89 REKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAP 163 (165)
T ss_dssp HHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHHGG
T ss_pred cccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHhhh
Confidence 0123567788876544333333 3678999999999999998776567788888776554
No 23
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.82 E-value=2e-19 Score=151.90 Aligned_cols=116 Identities=20% Similarity=0.234 Sum_probs=78.8
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEE------eccc
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR------QSHQ 221 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~------~~~~ 221 (317)
....+.++|++.+++|||++|.......+|.|++|||++|+||++.+||+||++||||+.+....++.+. ....
T Consensus 26 ~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 105 (165)
T 3oga_A 26 RQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTY 105 (165)
T ss_dssp EEEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC
T ss_pred ceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEec
Confidence 3344555566668999999998653224689999999999999999999999999999999877766432 1111
Q ss_pred CCCce-----EEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 222 SFFEK-----SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 222 ~~~~~-----~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
..... ...+|.|.. ....+. .++|+.+++|++++++.++++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~E~~~~~W~~~~el~~~~~~ 152 (165)
T 3oga_A 106 ADGRQEEIYMIYLIFDCVS--ANRDIC-INDEFQDYAWVKPEELALYDLN 152 (165)
T ss_dssp --CCEEEEEEEEEEEEEEE--SCCCCC-CCTTEEEEEEECGGGGGGSCBC
T ss_pred CCCCceeEEEEEEEEEeec--cCCCcc-CCchheeeEEccHHHHhhCCCC
Confidence 11111 123333433 222332 3478999999999999999886
No 24
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.82 E-value=2.7e-19 Score=151.97 Aligned_cols=120 Identities=21% Similarity=0.329 Sum_probs=91.0
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceE
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 227 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~ 227 (317)
..+.|+++|++ +++|||++|... .|.|+||||++|+||++.+||+||++||||+.+....+++............
T Consensus 22 ~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 96 (171)
T 3id9_A 22 MQVRVTGILIE-DEKVLLVKQKVA----NRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDKPDASPSLL 96 (171)
T ss_dssp CEEEEEEEEEE-TTEEEEEECSST----TCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSSSCEE
T ss_pred eEEEEEEEEEE-CCEEEEEEEECC----CCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEcccCCCCcEE
Confidence 45678888887 589999999863 5899999999999999999999999999999998888888877666555666
Q ss_pred EEEEEEEEccCCcc---ccCCccceeeEEEEeccccccCCCC-ccHHHH
Q 021099 228 DIFFLCMLRPLSFD---IQKQESEIEAAEWMPLEEYAAQPYV-QNQELL 272 (317)
Q Consensus 228 ~~~f~~~l~~~~~~---~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii 272 (317)
.++|.+........ ...+++|+.+++|++++++.++++. ...+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l 145 (171)
T 3id9_A 97 HITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLI 145 (171)
T ss_dssp EEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHH
T ss_pred EEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHH
Confidence 67777765432211 1235688999999999999998877 333433
No 25
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.82 E-value=2.4e-19 Score=154.01 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=103.0
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC--Cc
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF--FE 225 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~--~~ 225 (317)
++++ ++++++++++|||++|.+.+ ..|.|.||||++|+||++.+||+||++||||+.+.....++........ ..
T Consensus 24 ~~~~-~~~vi~~~~~vLL~~r~~~~--~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 100 (176)
T 3q93_A 24 SRLY-TLVLVLQPQRVLLGMKKRGF--GAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL 100 (176)
T ss_dssp EEEE-EEEEEECSSEEEEEEECSST--TTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCE
T ss_pred CcEE-EEEEEEeCCEEEEEEEcCCC--CCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcE
Confidence 4444 44555668999999987654 4699999999999999999999999999999999988888776654433 23
Q ss_pred eEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhccccCCCCCCCcCCCccccCCCce
Q 021099 226 KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDTRGYHGFSPVPTTSAFSDKKH 305 (317)
Q Consensus 226 ~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~ 305 (317)
...++|.|... ... ....|..+++|++++++.++++.+.. +.++..+++.. .....+.++++..
T Consensus 101 ~~~~~f~~~~~--~~~--~~~~e~~~~~W~~~~el~~~~~~~~~---~~~l~~~~~~~---------~~~~~~~~~~~~~ 164 (176)
T 3q93_A 101 MDVHVFCTDSI--QGT--PVESDEMRPCWFQLDQIPFKDMWPDD---SYWFPLLLQKK---------KFHGYFKFQGQDT 164 (176)
T ss_dssp EEEEEEEESCE--ESC--CCCCSSEEEEEEETTCCCGGGBCTTH---HHHHHHHHTTC---------CEEEEEEEETTTE
T ss_pred EEEEEEEEECC--CCC--cCCCcceeeEEeeHHHccccccCcch---HHHHHHHHcCC---------cEEEEEEEcCCCc
Confidence 34566666322 222 23456677899999999988776422 33444444421 1233455666777
Q ss_pred eeeecccccc
Q 021099 306 YFYLNSVDLK 315 (317)
Q Consensus 306 ~~y~~~~~~~ 315 (317)
.++++-++++
T Consensus 165 ~~~~~~~~~~ 174 (176)
T 3q93_A 165 ILDYTLREVD 174 (176)
T ss_dssp EEEEEEEECS
T ss_pred hhhhhhhhhc
Confidence 7777766654
No 26
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.82 E-value=3.3e-19 Score=156.95 Aligned_cols=129 Identities=23% Similarity=0.335 Sum_probs=99.6
Q ss_pred CCCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecc---
Q 021099 144 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSH--- 220 (317)
Q Consensus 144 ~~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~--- 220 (317)
.+.++.++|+++|++ +++|||++|.. .|.|.+|||++|+||++.+||+||++||||+.+....+++.....
T Consensus 63 ~~~~~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~ 136 (205)
T 3q1p_A 63 GYQTPKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQ 136 (205)
T ss_dssp SSCCCEEEEEEEEEE-TTEEEEEEC--------CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHS
T ss_pred CCCCCcceEEEEEEE-CCEEEEEEEcC-----CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEeccccC
Confidence 356677889999998 78999999873 479999999999999999999999999999999988888877643
Q ss_pred --cCCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHHh
Q 021099 221 --QSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSA 281 (317)
Q Consensus 221 --~~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l~ 281 (317)
....+...++|.|..... .+.. +.|+.+++|++++++.++.+. ...+.+..+.+.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~ 197 (205)
T 3q1p_A 137 PSPSATHVYKIFIGCEIIGG--EKKT-SIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKD 197 (205)
T ss_dssp CCCCSSCEEEEEEEEEEEEE--CCCC-CTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHC
T ss_pred CCCCCceEEEEEEEEEecCC--ccCC-CCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhC
Confidence 222456677888876432 2323 388999999999999998876 445666666555443
No 27
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.82 E-value=2.8e-20 Score=162.70 Aligned_cols=151 Identities=17% Similarity=0.256 Sum_probs=89.0
Q ss_pred CcceeEEEEEEE--eCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC
Q 021099 146 ASHRVGVGAFVM--NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF 223 (317)
Q Consensus 146 ~~~~v~v~~iv~--~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~ 223 (317)
...+..++++|+ +++++|||++|.+. ++.|.+|||++|+||++.+||+||++||||+++....+++......
T Consensus 37 ~~~~~~~~~vi~~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~~~~-- 110 (194)
T 2fvv_A 37 DGYKKRAACLCFRSESEEEVLLVSSSRH----PDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQE-- 110 (194)
T ss_dssp TSCEEEEEEEEESSTTCCEEEEEECSSC----TTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEEETT--
T ss_pred CCccccEEEEEEEECCCCEEEEEEEeCC----CCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEEcCC--
Confidence 344566777776 34689999998763 4789999999999999999999999999999998888887766432
Q ss_pred CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhccccCCCCCCCcCCCccccCCC
Q 021099 224 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDTRGYHGFSPVPTTSAFSDK 303 (317)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~ 303 (317)
......+|+|.+............+..+++|++++++.++.... ..+....+..+..+... ..+..+++.+|+++.+
T Consensus 111 ~~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~~-~~~~~~~l~~l~~~~~~--~~~~~~~~~~f~~~~~ 187 (194)
T 2fvv_A 111 RKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYH-KPVQASYFETLRQGYSA--NNGTPVVATTYSVSAQ 187 (194)
T ss_dssp TTEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTTT-CHHHHHHTCC-------------------------
T ss_pred CceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhcC-cHHHHHHHHHHhhcccc--cCchhccCcceEEeec
Confidence 23445667765432111111112345789999999998754332 45566666666666555 3588899999998865
Q ss_pred ce
Q 021099 304 KH 305 (317)
Q Consensus 304 ~~ 305 (317)
.+
T Consensus 188 ~~ 189 (194)
T 2fvv_A 188 SS 189 (194)
T ss_dssp --
T ss_pred cc
Confidence 43
No 28
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.82 E-value=1.9e-19 Score=158.55 Aligned_cols=167 Identities=23% Similarity=0.371 Sum_probs=96.7
Q ss_pred eEEcchhhhcchhHHHhcCceeeecCCceEE-----------EEeecC-------CCCCCCCCCCcceeEEEEEEEeCCc
Q 021099 100 WIKLPIELANLVEPAVKEGFWFHHAEPNYLM-----------LVYWIP-------GGANTLPANASHRVGVGAFVMNGKR 161 (317)
Q Consensus 100 wl~l~~~~~~l~~~~~~~gf~~h~~~~~~~~-----------l~~wl~-------~~~~~~p~~~~~~v~v~~iv~~~~g 161 (317)
|+.+......+ .+.|..|.++..|... +..+-. ...+....+.++.++|+++|++ ++
T Consensus 7 ~~~~~~~l~~~----a~~gl~~~~~~~d~er~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~v~~vv~~-~~ 81 (206)
T 3o8s_A 7 WLEWAVRLQAL----AQTGLAYGKDVYDMERFEEIRQIAAEMLVEPSGQPLEVVKDLFCNETGYQTPKLDTRAAIFQ-ED 81 (206)
T ss_dssp -----------------------------------------------------------------CCEEEEEEEEEE-TT
T ss_pred HHHHHHHHHHH----HHhhhccCCCchhHHHHHHHHHHHHHHHHhccCCCHHHHHHHhccccCCCCCCccEEEEEEE-CC
Confidence 65555555554 4468888877776432 211111 0011223356778899999998 48
Q ss_pred eEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccC-----CCceEEEEEEEEEc
Q 021099 162 EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS-----FFEKSDIFFLCMLR 236 (317)
Q Consensus 162 ~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~-----~~~~~~~~f~~~l~ 236 (317)
+|||++|. .+.|.||||++|+||++.+||+||++||||+.+....+++....... ..+...++|.|...
T Consensus 82 ~vLLvrr~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (206)
T 3o8s_A 82 KILLVQEN------DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNPAKSAHRVTKVFILCRLL 155 (206)
T ss_dssp EEEEEECT------TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC-----CEEEEEEEEEEE
T ss_pred EEEEEEec------CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccCCCCCCceEEEEEEEEEec
Confidence 99999987 37899999999999999999999999999999998888887763211 24456677788664
Q ss_pred cCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHH
Q 021099 237 PLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 280 (317)
Q Consensus 237 ~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l 280 (317)
.. .+.. +.|..+++|++++++.++++. ...+++..+.+.+.
T Consensus 156 ~~--~~~~-~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~ 197 (206)
T 3o8s_A 156 GG--EFQP-NSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASR 197 (206)
T ss_dssp EE--CCCC-CSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHH
T ss_pred CC--eecC-CCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHH
Confidence 33 2222 378999999999999999876 44566666555433
No 29
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.82 E-value=5.5e-19 Score=150.02 Aligned_cols=132 Identities=21% Similarity=0.318 Sum_probs=99.5
Q ss_pred cceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEec------c
Q 021099 147 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS------H 220 (317)
Q Consensus 147 ~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~------~ 220 (317)
..+.+|++++++.+++|||++|.. .+.|.+|||++|+||++.+||+||++||||+.+....+++.... .
T Consensus 6 ~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~ 80 (164)
T 2kdv_A 6 GYRPNVGIVICNRQGQVMWARRFG-----QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP 80 (164)
T ss_dssp SEEEEEEEEEECTTSEEEEEEETT-----CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECC
T ss_pred CCCcEEEEEEEccCCEEEEEEEcC-----CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecC
Confidence 346678889999889999999874 47899999999999999999999999999999988887766421 1
Q ss_pred c---------CCCceEEEEEEEEEccCCccccCC---ccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhcc
Q 021099 221 Q---------SFFEKSDIFFLCMLRPLSFDIQKQ---ESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKV 283 (317)
Q Consensus 221 ~---------~~~~~~~~~f~~~l~~~~~~~~~~---~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~~ 283 (317)
. ...+...++|+|.+......+..+ ..|+.+++|++++++.+......+++++.++..+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~~l 155 (164)
T 2kdv_A 81 KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVV 155 (164)
T ss_dssp TTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 1 112345688888765543344433 36899999999999877554444677777777766543
No 30
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.81 E-value=3.2e-19 Score=152.82 Aligned_cols=127 Identities=19% Similarity=0.175 Sum_probs=95.9
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCCCCCcEEc-ceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEE
Q 021099 150 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKF-PTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 228 (317)
Q Consensus 150 v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~-PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 228 (317)
.++++++++.+++|||++|.......+|.|+| |||++|+||++.+||+||++||||+.+.....++.+...........
T Consensus 38 ~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 117 (180)
T 2fkb_A 38 RATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWG 117 (180)
T ss_dssp EEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETTEEEEE
T ss_pred eEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCCceEEE
Confidence 47788888888999999987654434689999 99999999999999999999999999877777766655544445556
Q ss_pred EEEEEEEccCCccccCCccceeeEEEEeccccccC--CCCccHHHHHHHHHHHHhc
Q 021099 229 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ--PYVQNQELLKYIVDICSAK 282 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~--~~~~~~~ii~~~~~~~l~~ 282 (317)
++|+|.. ...+..++.|+.+++|++++++.++ ++. +....++..++..
T Consensus 118 ~~f~~~~---~~~~~~~~~E~~~~~W~~~~el~~~~~~~~---~~~~~~l~~~~~~ 167 (180)
T 2fkb_A 118 ALFSCVS---HGPFALQEDEVSEVCWLTPEEITARCDEFT---PDSLKALALWMKR 167 (180)
T ss_dssp EEEEEEC---CCCCCCCTTTEEEEEEECHHHHHTTGGGBC---HHHHHHHHHHHHH
T ss_pred EEEEEec---CCCcCCChhHhheEEEecHHHHHHHHHHhC---CcHHHHHHHHHHh
Confidence 7777752 2344556789999999999999998 443 2233444444443
No 31
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.81 E-value=2.6e-19 Score=148.74 Aligned_cols=130 Identities=21% Similarity=0.190 Sum_probs=94.2
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC--Cce
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF--FEK 226 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~--~~~ 226 (317)
+++|++++. ++++|||++|...+. ++.|.+|||++|+||++.+||+||++||||+.+....+++........ ...
T Consensus 8 ~~~v~~ii~-~~~~vLl~~r~~~~~--~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 84 (153)
T 2b0v_A 8 NVTVAAVIE-QDDKYLLVEEIPRGT--AIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTTY 84 (153)
T ss_dssp EEEEEEECE-ETTEEEEEEECSSSS--CCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEEE
T ss_pred CEEEEEEEe-eCCEEEEEEEcCCCC--CCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcEE
Confidence 456666555 478999999987543 589999999999999999999999999999999888888765433221 223
Q ss_pred EEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhc
Q 021099 227 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 282 (317)
Q Consensus 227 ~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~ 282 (317)
..++|.|...... ....++.|+.+++|++++++.++......+.+..++..+++.
T Consensus 85 ~~~~f~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~~~ 139 (153)
T 2b0v_A 85 LRFTFSGQVVSFD-PDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAG 139 (153)
T ss_dssp EEEEEEEEEEEEC-TTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHHTT
T ss_pred EEEEEEEEeCCCC-CCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHHhC
Confidence 4456777554322 123456889999999999999872223345666677766654
No 32
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.81 E-value=2.1e-20 Score=160.72 Aligned_cols=120 Identities=23% Similarity=0.206 Sum_probs=93.6
Q ss_pred CCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCC
Q 021099 145 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF 224 (317)
Q Consensus 145 ~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~ 224 (317)
+..++.+|++++++.+++|||+++.+.+. +++.|+||||++|+||++.+||+||++||||+.+.....++.........
T Consensus 37 ~~~~~~~v~v~i~~~~~~vLL~~r~~~~~-~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 115 (182)
T 2yvp_A 37 RPGPVAASFVLPVTERGTALLVRQYRHPT-GKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFT 115 (182)
T ss_dssp BCSSCEEEEEEEBCTTSEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTB
T ss_pred EEecCCEEEEEEEcCCCEEEEEEeccCCC-CCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCcc
Confidence 34556688888898889999999876543 35899999999999999999999999999999998888776655544445
Q ss_pred ceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCC
Q 021099 225 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY 265 (317)
Q Consensus 225 ~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 265 (317)
+...++|+|........+..++.|+.+++|++++++.++..
T Consensus 116 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 156 (182)
T 2yvp_A 116 AVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLA 156 (182)
T ss_dssp CCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHH
T ss_pred ccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 56677777753221233445778999999999999987543
No 33
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.81 E-value=2.6e-19 Score=149.84 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=89.5
Q ss_pred cceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCcc--ceeEEEEEEecccCC-
Q 021099 147 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT--EFVEVLAFRQSHQSF- 223 (317)
Q Consensus 147 ~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~--~~~~~l~~~~~~~~~- 223 (317)
.+.++|+++|++.+++|||++|...+ ..|.|.||||++|+||++.+||+||++||||+.+ .....++...+....
T Consensus 16 ~~~~~v~~vi~~~~~~vLl~~r~~~~--~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 93 (160)
T 1rya_A 16 TPLVSLDFIVENSRGEFLLGKRTNRP--AQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDN 93 (160)
T ss_dssp SCEEEEEEEEECTTSCEEEEEECSSS--STTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSB
T ss_pred CcEEEEEEEEEcCCCEEEEEeccCCC--CCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEccc
Confidence 34578899999888999999998754 3689999999999999999999999999999995 356666655433221
Q ss_pred -------CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 224 -------FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 224 -------~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.+...++|.|... ...+..++.|+.+++|++++++.+++..
T Consensus 94 ~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~e~~~~~W~~~~el~~~~~~ 141 (160)
T 1rya_A 94 FSGTDFTTHYVVLGFRFRVS--EEELLLPDEQHDDYRWLTSDALLASDNV 141 (160)
T ss_dssp TTBSSSCEEEEEEEEEEECC--GGGCCCCSSSEEEEEEECHHHHHHCTTB
T ss_pred ccCCCcCcEEEEEEEEEEcC--ccccccCCCccceEEEecHHHHhhcccc
Confidence 1345666777543 2344456789999999999999987654
No 34
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.81 E-value=7.2e-19 Score=152.59 Aligned_cols=126 Identities=21% Similarity=0.283 Sum_probs=95.4
Q ss_pred CCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCC
Q 021099 145 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF 224 (317)
Q Consensus 145 ~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~ 224 (317)
+..+.++|+++|++ +++|||++|...+. .+.|.||||++|+||++.+||+||++||||+.+....++++.... ..
T Consensus 36 ~~~~~~~v~~ii~~-~~~vLL~~r~~~~~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~--~~ 110 (189)
T 3cng_A 36 YQNPKVIVGCIPEW-ENKVLLCKRAIAPY--RGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVYSLP--HI 110 (189)
T ss_dssp CCCCEEEEEEEEEE-TTEEEEEEESSSSS--TTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEG--GG
T ss_pred CCCCceEEEEEEEe-CCEEEEEEccCCCC--CCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEEecC--CC
Confidence 34556788888887 78999999987652 589999999999999999999999999999999877777664433 23
Q ss_pred ceEEEEEEEEEccCCccccCCccceeeEEEEeccccc--cCCCCccHHHHHHHHHH
Q 021099 225 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYA--AQPYVQNQELLKYIVDI 278 (317)
Q Consensus 225 ~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~--~~~~~~~~~ii~~~~~~ 278 (317)
....++|+|..... .+ ..+.|+.+++|++++++. .+.++....++...++.
T Consensus 111 ~~~~~~f~~~~~~~--~~-~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~ 163 (189)
T 3cng_A 111 SQVYMLFRAKLLDL--DF-FPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEE 163 (189)
T ss_dssp TEEEEEEEEEECCS--CC-CCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHH
T ss_pred cEEEEEEEEEeCCC--cc-CCCccceeEEEECHHHcCcccccChHHHHHHHHHHHh
Confidence 56677888876432 22 236789999999999998 56655444444444443
No 35
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.81 E-value=8.2e-20 Score=158.09 Aligned_cols=136 Identities=18% Similarity=0.196 Sum_probs=97.3
Q ss_pred eEEEEEEEe---C----CceEEEEEecCC-----CCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEE
Q 021099 150 VGVGAFVMN---G----KREVLVVQENSG-----RFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 217 (317)
Q Consensus 150 v~v~~iv~~---~----~g~VLLv~r~~~-----~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~ 217 (317)
++|+++|+. + +++|||++|... .....|.|.+|||++|+||++.+||+||++||||+++.....++.+
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~ 107 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVF 107 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEE
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEEEEE
Confidence 666666654 2 468999999531 1114689999999999999999999999999999999999988876
Q ss_pred ecccCC--CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHHhcccc
Q 021099 218 QSHQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSAKVDT 285 (317)
Q Consensus 218 ~~~~~~--~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l~~~~~ 285 (317)
...... ......+|++.+.........+.+|+.+++|++++++.++++. ....++..+++.+..+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~~~~~~ 178 (187)
T 3i9x_A 108 DKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITEEFLL 178 (187)
T ss_dssp CCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHHHHHHT
T ss_pred cCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHHhhhhc
Confidence 654322 2233455555443222112234578889999999999987666 4577888888877765543
No 36
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.81 E-value=2e-19 Score=151.84 Aligned_cols=115 Identities=20% Similarity=0.204 Sum_probs=88.0
Q ss_pred cceeEEEEEEEeCC-ceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC--
Q 021099 147 SHRVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF-- 223 (317)
Q Consensus 147 ~~~v~v~~iv~~~~-g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~-- 223 (317)
...+++.++|++++ ++|||++|...+ + .|.|+||||++|+||++.+||+||++||||+.+....+++........
T Consensus 8 ~~~~~v~~vi~~~~~~~vLL~~r~~~~-~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 85 (161)
T 3exq_A 8 PVELVTMVMVTDPETQRVLVEDKVNVP-W-KAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDRQ 85 (161)
T ss_dssp CEEEEEEEEEBCTTTCCEEEECCCCCT-T-TCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSSCS
T ss_pred CceEEEEEEEEeCCCCEEEEEEccCCC-C-CCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCCCC
Confidence 34567777888866 799999988543 3 467999999999999999999999999999999988888777665532
Q ss_pred CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCc
Q 021099 224 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQ 267 (317)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 267 (317)
.....++|.|... ... ++..|..+++|++++++.++++..
T Consensus 86 ~~~~~~~~~~~~~--~~~--~~~~e~~~~~W~~~~el~~~~~~~ 125 (161)
T 3exq_A 86 HRKLGLLYRASNF--TGT--LKASAEGQLSWLPITALTRENSAA 125 (161)
T ss_dssp SEEEEEEEEECCE--ESC--CCGGGTTTEEEECGGGCCTTTBCT
T ss_pred eEEEEEEEEEecc--CCc--cCCCccceEEEeeHHHhhhCccCh
Confidence 3334455555332 222 345677889999999999988763
No 37
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.81 E-value=9e-19 Score=145.81 Aligned_cols=129 Identities=23% Similarity=0.354 Sum_probs=94.1
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccC-CCce
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS-FFEK 226 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~-~~~~ 226 (317)
++++|++++.+ +++|||++|... +.+.|.+|||++|+||++.+||+||++||||+++....+++....... ....
T Consensus 4 p~~~v~~ii~~-~~~vLl~~r~~~---~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 79 (153)
T 3shd_A 4 PHVTVACVVHA-EGKFLVVEETIN---GKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPF 79 (153)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEET---TEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCCE
T ss_pred CceEEEEEEEe-CCEEEEEEecCC---CCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCceE
Confidence 35566665555 789999998732 458899999999999999999999999999999998888877644332 3445
Q ss_pred EEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhc
Q 021099 227 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 282 (317)
Q Consensus 227 ~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~ 282 (317)
..++|.|..... .....++.|+.+++|++++++...+... .+.+..++..+++.
T Consensus 80 ~~~~f~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~l~~~~~~ 133 (153)
T 3shd_A 80 LRFLFAIELEQI-CPTQPHDSDIDCCRWVSAEEILQASNLR-SPLVAESIRCYQSG 133 (153)
T ss_dssp EEEEEEEECSSC-CCCCCCSTTCCEEEEECHHHHHTCSCBS-STHHHHHHHHHHHT
T ss_pred EEEEEEEEcccc-CcCCCCcccceeeEEecHHHhhcccccc-CchHHHHHHHHHhC
Confidence 567788865433 2244667899999999999994333222 34455666666653
No 38
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.80 E-value=2.6e-19 Score=150.50 Aligned_cols=110 Identities=16% Similarity=0.241 Sum_probs=83.8
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEec---------
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS--------- 219 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~--------- 219 (317)
..+++++|++ +++|||++|+. .|.|.+|||++|+||++.+||+||++||||+.+.....++....
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 79 (159)
T 3f6a_A 6 HFTVSVFIVC-KDKVLLHLHKK-----AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEK 79 (159)
T ss_dssp CEEEEEEEEE-TTEEEEEECSS-----SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCE
T ss_pred eEEEEEEEEE-CCEEEEEEcCC-----CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccc
Confidence 4577888888 78999999974 48899999999999999999999999999999887766632100
Q ss_pred -----------cc-CCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 220 -----------HQ-SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 220 -----------~~-~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.. .......++|+|.... ..+..+++|..+++|++++++.++++.
T Consensus 80 ~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~~ 136 (159)
T 3f6a_A 80 LLINPIHTILGDVSPNHSHIDFVYYATTTS--FETSPEIGESKILKWYSKEDLKNAHNI 136 (159)
T ss_dssp EECCCSEEEEECSSSSSCEEEEEEEEECSC--SCCCCCTTSCCCEEEECSSSSTTCSSS
T ss_pred cccCccccccccCCCCceEEEEEEEEEeCC--CCcCCCCCcccceEEeeHHHHhhCcCC
Confidence 00 1112345677776543 344456789999999999999999844
No 39
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.80 E-value=8.4e-19 Score=146.60 Aligned_cols=118 Identities=25% Similarity=0.344 Sum_probs=91.7
Q ss_pred cceeEEEEEEEeCCceEEEEEecC---CCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC
Q 021099 147 SHRVGVGAFVMNGKREVLVVQENS---GRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF 223 (317)
Q Consensus 147 ~~~v~v~~iv~~~~g~VLLv~r~~---~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~ 223 (317)
....+++++|++.+++|||++|.+ .+. .+|.|+||||++|+||++.+||+||++||||+.+.....++........
T Consensus 11 ~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~-~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~ 89 (159)
T 1sjy_A 11 VELRAAGVVLLNERGDILLVQEKGIPGHPE-KAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPD 89 (159)
T ss_dssp CCEEEEEEEEBCTTCCEEEEEESCC----C-CCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTT
T ss_pred eEEEeEEEEEEeCCCCEEEEEecccCcCCC-CCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCC
Confidence 345678888888889999999986 222 3589999999999999999999999999999999888888766644333
Q ss_pred -CceEEEEEEEEEccCCccccC-CccceeeEEEEeccccccCCCC
Q 021099 224 -FEKSDIFFLCMLRPLSFDIQK-QESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 224 -~~~~~~~f~~~l~~~~~~~~~-~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.....++|.|...... .+.. +++|+.+++|++++++.++...
T Consensus 90 ~~~~~~~~f~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (159)
T 1sjy_A 90 GVLILRHVWLAEPEPGQ-TLAPAFTDEIAEASFVSREDFAQLYAA 133 (159)
T ss_dssp SCEEEEEEEEEEECSSC-CCCCCCCSSEEEEEEECHHHHHHHHHT
T ss_pred CceEEEEEEEEEccCCC-ccccCCCCceeEEEEecHHHHHHhhhc
Confidence 4556777877664322 1444 6788999999999999886544
No 40
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.80 E-value=1.8e-19 Score=150.77 Aligned_cols=113 Identities=22% Similarity=0.266 Sum_probs=81.1
Q ss_pred CcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEec-----c
Q 021099 146 ASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS-----H 220 (317)
Q Consensus 146 ~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~-----~ 220 (317)
.....++++++++.+++|||++|. .+.|.||||++|+||++.+||+||++||||+.+....+++.... .
T Consensus 18 ~~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 91 (153)
T 3eds_A 18 LIFXPSVAAVIKNEQGEILFQYPG------GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYT 91 (153)
T ss_dssp CEEEEEEEEEEBCTTCCEEEECC---------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEE
T ss_pred cEEeeeEEEEEEcCCCeEEEEEcC------CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeee
Confidence 344567888888888999998886 37899999999999999999999999999999998888876531 1
Q ss_pred cCCC---ceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 221 QSFF---EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 221 ~~~~---~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.... .....+|.|.... ..+..+++|+.+++|++++++.++.++
T Consensus 92 ~~~~~~~~~~~~~f~~~~~~--~~~~~~~~E~~~~~W~~~~el~~l~~~ 138 (153)
T 3eds_A 92 YSNGDEVEYIVVVFECEVTS--GELRSIDGESLKLQYFSLSEKPPLALP 138 (153)
T ss_dssp CTTSCEEEEEEEEEEEEEEE--ECCC-------CEEEECGGGCCCBSSC
T ss_pred cCCCCeEEEEEEEEEEEecC--CccccCCCcEEEEEEECHHHCchhccc
Confidence 1211 2245677776543 344456788999999999999998765
No 41
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.80 E-value=2.8e-19 Score=155.33 Aligned_cols=123 Identities=22% Similarity=0.150 Sum_probs=89.6
Q ss_pred CCCCCCcceeEEEEEEEeCCc--eEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEe
Q 021099 141 TLPANASHRVGVGAFVMNGKR--EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQ 218 (317)
Q Consensus 141 ~~p~~~~~~v~v~~iv~~~~g--~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~ 218 (317)
+....+..+.++++++++.++ +|||++|.......+|.|+||||++|+||++.+||+||++||||+++.....++...
T Consensus 26 ~~~~~~~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~ 105 (194)
T 1nqz_A 26 TALELPHYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELD 105 (194)
T ss_dssp -------CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECC
T ss_pred hhccCCCCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEcc
Confidence 333344556677777778777 999999976422246899999999999999999999999999999999888887766
Q ss_pred cccCCCceEEEEEEEEEccCCcc-ccCCccceeeEEEEecccc-ccCC
Q 021099 219 SHQSFFEKSDIFFLCMLRPLSFD-IQKQESEIEAAEWMPLEEY-AAQP 264 (317)
Q Consensus 219 ~~~~~~~~~~~~f~~~l~~~~~~-~~~~~~E~~~~~Wv~~~el-~~~~ 264 (317)
......+...++|+|.+... .. ...+++|+.+++|++++++ .+..
T Consensus 106 ~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 106 DVFTPVGFHVTPVLGRIAPE-ALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp CEEETTTEEEEEEEEEECGG-GGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred CccCCCCeEEEEEEEEecCC-ccccCCCccceeEEEEEEHHHhccCCC
Confidence 55444566777888876422 23 4467789999999999999 7643
No 42
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.79 E-value=9.2e-20 Score=146.89 Aligned_cols=118 Identities=19% Similarity=0.272 Sum_probs=89.3
Q ss_pred EEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEEEEEE
Q 021099 153 GAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDIFFL 232 (317)
Q Consensus 153 ~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~ 232 (317)
.++|++.+++|||++|..... .+|.|+||||++++||++.+||+||++||||+.+.....++...+..........+|.
T Consensus 8 ~~ii~~~~~~vLl~~r~~~~~-~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (129)
T 1mut_A 8 VGIIRNENNEIFITRRAADAH-MANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWL 86 (129)
T ss_dssp CEECEETTTEEEEEECSSCCS-SSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCEE
T ss_pred EEEEEecCCEEEEEEeCCCCC-CCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEEE
Confidence 345667789999999987654 3599999999999999999999999999999998877666655444444444456777
Q ss_pred EEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHH
Q 021099 233 CMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYI 275 (317)
Q Consensus 233 ~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~ 275 (317)
|..... . .+..|..+++|++++++.+++++ ...++++.+
T Consensus 87 ~~~~~~--~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 87 VERWEG--E--PWGKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp EEECSS--C--CCCCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred EEccCC--c--cCCcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 765322 2 34567888999999999999887 445555443
No 43
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.79 E-value=8.8e-19 Score=144.54 Aligned_cols=111 Identities=25% Similarity=0.320 Sum_probs=83.8
Q ss_pred eeEEEEEEEeCC-ceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCcccee--EEEEEEecc-----
Q 021099 149 RVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFV--EVLAFRQSH----- 220 (317)
Q Consensus 149 ~v~v~~iv~~~~-g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~--~~l~~~~~~----- 220 (317)
.++|+++|++.+ +++||++|... +|.|.+|||++|+||++.+||+||++||||+.+... .+++.....
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 84 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIF 84 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeee
Confidence 468889999874 89999998763 489999999999999999999999999999998763 344332111
Q ss_pred ------c--CCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 221 ------Q--SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 221 ------~--~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
. .......++|.|...... . ....|+.+++|++++++.++.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~~~~~~~--~-~~~~E~~~~~W~~~~el~~~~~~ 135 (150)
T 2o1c_A 85 SHLRHRYAPGVTRNTESWFCLALPHER--Q-IVFTEHLAYKWLDAPAAAALTKS 135 (150)
T ss_dssp GGGGGGBCTTCCEEEEEEEEEEESSCC--C-CCCSSSSCEEEEEHHHHHHHCSC
T ss_pred cccccccCCCCcceEEEEEEEEcCCCC--C-cChhHhhccEeecHHHHHhhhcC
Confidence 1 123456677777664321 1 23478899999999999998775
No 44
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.79 E-value=3.4e-19 Score=151.63 Aligned_cols=114 Identities=23% Similarity=0.307 Sum_probs=85.2
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceE
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 227 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~ 227 (317)
++.+|++++++ ++++||+++.+.+. +++.|++|||++|+||++.+||+||++||||+ +.....++.........+..
T Consensus 33 ~~~~v~vii~~-~~~vLL~~~~r~~~-~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~~~ 109 (170)
T 1v8y_A 33 HKPAVAVIALR-EGRMLFVRQMRPAV-GLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTDEK 109 (170)
T ss_dssp ECCEEEEEEEE-TTEEEEEECCBTTT-TBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBCCE
T ss_pred cCCeEEEEEEE-CCEEEEEEEEeCCC-CCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccccE
Confidence 44588888899 89999999876553 46899999999999999999999999999999 88888887665555445566
Q ss_pred EEEEEEEEccCCccccCCccceeeEEEEeccccccCCC
Q 021099 228 DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY 265 (317)
Q Consensus 228 ~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 265 (317)
.++|+|..... .....+++|+.+++|++++++.++..
T Consensus 110 ~~~f~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~ 146 (170)
T 1v8y_A 110 THVFLAENLKE-VEAHPDEDEAIEVVWMRPEEALERHQ 146 (170)
T ss_dssp EEEEEEEEEEE-CC--------CEEEEECHHHHHHHHH
T ss_pred EEEEEEEeccc-cCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 77788865332 23344678899999999999987543
No 45
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.79 E-value=7.3e-19 Score=145.08 Aligned_cols=120 Identities=18% Similarity=0.174 Sum_probs=86.8
Q ss_pred CcceeEEEEEEEeC-CceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEec---c-
Q 021099 146 ASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS---H- 220 (317)
Q Consensus 146 ~~~~v~v~~iv~~~-~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~---~- 220 (317)
...+.+++++|+++ +++|||++|. .|.|.||||++|+||++.+||+||++||||+.+.....++.... .
T Consensus 15 ~~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 88 (148)
T 2azw_A 15 YQTRYAAYIIVSKPENNTMVLVQAP------NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSN 88 (148)
T ss_dssp CEECCEEEEECEEGGGTEEEEEECT------TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEET
T ss_pred eeeeeEEEEEEECCCCCeEEEEEcC------CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCC
Confidence 34566788888886 6899999974 27899999999999999999999999999999988887765421 1
Q ss_pred cC--CCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHH
Q 021099 221 QS--FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKY 274 (317)
Q Consensus 221 ~~--~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~ 274 (317)
.. ......++|.|..... . ....+|+.+++|++++++.++... ..+.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 142 (148)
T 2azw_A 89 HRQTAYYNPGYFYVANTWRQ--L-SEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEK 142 (148)
T ss_dssp TTTEEEEEEEEEEEEEEEEE--C-SSCC-CCSEEEEECHHHHHHHBSCHHHHHHHHH
T ss_pred CCCcceEEEEEEEEEEcCcC--C-cCCCCceeeEEEeeHHHHHhhhcchhHHHHHHH
Confidence 11 1234466777755322 1 133467889999999999987765 33344433
No 46
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.78 E-value=1.2e-19 Score=159.83 Aligned_cols=120 Identities=22% Similarity=0.337 Sum_probs=86.0
Q ss_pred CcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecC-CCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCC
Q 021099 146 ASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVD-EGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF 224 (317)
Q Consensus 146 ~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve-~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~ 224 (317)
..+..+|++++++.+++|||+++.+.+. +.+.|+||||++| +||++.+||+||++||||+.+.....++..+......
T Consensus 40 ~~~~~av~v~i~~~~~~vLLvrr~r~~~-~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 118 (207)
T 1mk1_A 40 VEHFGAVAIVAMDDNGNIPMVYQYRHTY-GRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFS 118 (207)
T ss_dssp EEECCEEEEEECCTTSEEEEEEEEETTT-TEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTB
T ss_pred EeCCCEEEEEEEcCCCEEEEEEeecCCC-CCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCcc
Confidence 3445678888888889999999887653 4589999999999 9999999999999999999998888886654443333
Q ss_pred ceEEEEEEEEEccCCccc-cCCccceeeEEEEeccccccCCCC
Q 021099 225 EKSDIFFLCMLRPLSFDI-QKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 225 ~~~~~~f~~~l~~~~~~~-~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
....++|+|......... ..+++|+.+++|++++++.++...
T Consensus 119 ~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 161 (207)
T 1mk1_A 119 DESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLR 161 (207)
T ss_dssp CCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHT
T ss_pred ccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 445667777543222111 245688999999999999886544
No 47
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.77 E-value=4.8e-20 Score=169.42 Aligned_cols=193 Identities=19% Similarity=0.240 Sum_probs=114.8
Q ss_pred cceeccccCCCcEEEecCCCCCHHHHHHHHHHHH--HHHHHcCc-ceeeEEcchhhhcchhHHHhcCc---eeeecCCce
Q 021099 55 KFLNGINDNYGGVVVQMNEPMDPQLFASLLKSSI--SHWRQQAK-KGVWIKLPIELANLVEPAVKEGF---WFHHAEPNY 128 (317)
Q Consensus 55 ~~~~~~~d~~~gv~v~~~~~~~~~~f~~~l~~sl--~~w~~~~~-~~vwl~l~~~~~~l~~~~~~~gf---~~h~~~~~~ 128 (317)
.+...-.|-+.+.+++... ..-+....|..+| .+|.-.+. +..+-++| .+..++| .|||+.
T Consensus 12 ~~~~~l~dl~~rfi~n~p~--~~~~~~~~~~f~ie~a~wfy~d~~~~~~~~~p--------~~~~~~f~~~~f~~~~--- 78 (271)
T 2a6t_A 12 TFSQVLDDLSARFILNLPA--EEQSSVERLCFQIEQAHWFYEDFIRAQNDQLP--------SLGLRVFSAKLFAHCP--- 78 (271)
T ss_dssp CTHHHHHHHHHHHTTTSCG--GGTTCHHHHHHHHHHHHHHHHHTHHHHCSSSC--------CCCHHHHHHHHHTTCH---
T ss_pred CHHHHHHHHHHHHhhcCCH--HHhccHHHHHHHHHHHHHHHHHhhhhcccCCC--------cccHHHHHHHHhhhhh---
Confidence 3445555666677776531 1112223454555 67877653 22222333 3344556 788887
Q ss_pred EEEEeecCCCCCCCCC---CCcceeEEEEEEEeC-CceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHh
Q 021099 129 LMLVYWIPGGANTLPA---NASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEET 204 (317)
Q Consensus 129 ~~l~~wl~~~~~~~p~---~~~~~v~v~~iv~~~-~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEt 204 (317)
++.+|.+.....++. +.....+++++|+++ +++|||++|.+. ++.|++|||++|+||++.+||+||++|||
T Consensus 79 -~l~~~~~~~~~~~~~~~~~~~~v~~v~avv~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEs~~eAA~REl~EEt 153 (271)
T 2a6t_A 79 -LLWKWSKVHEEAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWKA----SSGWGFPKGKIDKDESDVDCAIREVYEET 153 (271)
T ss_dssp -HHHHC---CCHHHHHHHHHSCCCCEEEEEEBCSSSSEEEEEEESST----TCCCBCSEEECCTTCCHHHHHHHHHHHHH
T ss_pred -hhhcccccchhHHHHHHhcCCCCCeEEEEEEECCCCEEEEEEEeCC----CCeEECCcccCCCCcCHHHHHHHHHHHHh
Confidence 555666544333332 222334677888885 489999999763 47899999999999999999999999999
Q ss_pred CCccceeEEEEEEecccCCCceEEEEEEEEEccCCcccc-CCccceeeEEEEeccccccCCCC
Q 021099 205 SIDTEFVEVLAFRQSHQSFFEKSDIFFLCMLRPLSFDIQ-KQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 205 Gl~~~~~~~l~~~~~~~~~~~~~~~~f~~~l~~~~~~~~-~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
|+++.....+..+.. ....+....+|++.......... .+++|+.+++|++++++.++...
T Consensus 154 Gl~~~~l~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 154 GFDCSSRINPNEFID-MTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp CCCCTTTCCTTCEEE-EEETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred CCCceeeeeeeeecc-CCcCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 999876432211111 11123455667775443333223 25689999999999999987654
No 48
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.77 E-value=3.3e-18 Score=149.87 Aligned_cols=115 Identities=19% Similarity=0.163 Sum_probs=90.8
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEE
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 228 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 228 (317)
..+|++++++++ +|||+++.+.+. +++.|+||||++|+||++.+||+||++||||+.+.....++.............
T Consensus 49 ~~av~vl~~~~~-~vLLvrq~r~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 126 (198)
T 1vhz_A 49 REAVMIVPIVDD-HLILIREYAVGT-ESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKM 126 (198)
T ss_dssp CCEEEEEEEETT-EEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCEE
T ss_pred CCEEEEEEEECC-EEEEEEcccCCC-CCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcEE
Confidence 346777778866 999998876543 357899999999999999999999999999999998888877766555556667
Q ss_pred EEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 229 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
++|+|..... .....++.|..++.|++++++.++...
T Consensus 127 ~~f~a~~~~~-~~~~~~~~E~~~~~w~~~~el~~~~~~ 163 (198)
T 1vhz_A 127 NIVVAQDLYP-ESLEGDEPEPLPQVRWPLAHMMDLLED 163 (198)
T ss_dssp EEEEEEEEEE-CCCCCCCSSCCCEEEEEGGGGGGGGGC
T ss_pred EEEEEEeCCc-ccCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 7788864322 133456788899999999999987654
No 49
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.77 E-value=1.6e-18 Score=145.51 Aligned_cols=116 Identities=18% Similarity=0.276 Sum_probs=83.2
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEec----------
Q 021099 150 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS---------- 219 (317)
Q Consensus 150 v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~---------- 219 (317)
++++++|++ +++|||++|.. .|.|.+|||++|+||++.+||+||++||||++++....++....
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 75 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPL 75 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCS
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeecccccccccccc
Confidence 467788888 88999999874 47899999999999999999999999999999876655321110
Q ss_pred -------ccCC--CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHH
Q 021099 220 -------HQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 280 (317)
Q Consensus 220 -------~~~~--~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l 280 (317)
.... ......+|.|.. ...|..+++|++++++.++++. ...++++.+++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~f~~~~---------~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 137 (156)
T 1k2e_A 76 VILEEVVKYPEETHIHFDLIYLVKR---------VGGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLY 137 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEE---------EEECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHH
T ss_pred eeeeeeecCCCCceEEEEEEEEEEe---------cCCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 0010 111234455542 1246788999999999988766 45666766666543
No 50
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.77 E-value=7.8e-18 Score=154.45 Aligned_cols=128 Identities=18% Similarity=0.212 Sum_probs=95.0
Q ss_pred CCCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC
Q 021099 144 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF 223 (317)
Q Consensus 144 ~~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~ 223 (317)
.++...+++.+++. .+++|||++|...+ .|.|.+|||++|+||++++||+||++||||+++....+++...+..
T Consensus 135 ~yp~~~~~viv~v~-~~~~vLL~rr~~~~---~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~-- 208 (269)
T 1vk6_A 135 YYPQIAPCIIVAIR-RDDSILLAQHTRHR---NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPF-- 208 (269)
T ss_dssp ECCCCEEEEEEEEE-ETTEEEEEEETTTC---SSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEET--
T ss_pred ecCCCCcEEEEEEE-eCCEEEEEEecCCC---CCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCC--
Confidence 33444445544444 47899999998754 4899999999999999999999999999999999888887765443
Q ss_pred CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHh
Q 021099 224 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 281 (317)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~ 281 (317)
.+...++|++.... .++..+++|+.+++|++++++..++... .+.+.+++..++
T Consensus 209 ~~~~~~~f~a~~~~--~~~~~~~~E~~~~~W~~~~el~~l~~~~--si~~~li~~~l~ 262 (269)
T 1vk6_A 209 PQSLMTAFMAEYDS--GDIVIDPKELLEANWYRYDDLPLLPPPG--TVARRLIEDTVA 262 (269)
T ss_dssp TEEEEEEEEEEEEE--CCCCCCTTTEEEEEEEETTSCCSCCCTT--SHHHHHHHHHHH
T ss_pred CCEEEEEEEEEECC--CCcCCCCcceEEEEEEEHHHhhhcccCc--HHHHHHHHHHHH
Confidence 23466777776543 3455667899999999999999987762 233444444443
No 51
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.77 E-value=2.2e-18 Score=146.31 Aligned_cols=125 Identities=17% Similarity=0.166 Sum_probs=90.4
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEE-cceeecCCCCCHHHHHHHHHHHHhCCcccee--EEEEEEe-cccCCC
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWK-FPTGVVDEGEDICVAAVREVKEETSIDTEFV--EVLAFRQ-SHQSFF 224 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~-~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~--~~l~~~~-~~~~~~ 224 (317)
..+++++|++.+++|||++|...+...+|.|+ +|||++++||++.+||+||++||||+.+... ..++... .... .
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~-~ 112 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTT-L 112 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSC-C
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCC-C
Confidence 45778888888899999998654433368999 9999999999999999999999999998774 3444433 2222 2
Q ss_pred ceEEEEEEEEEccCCccccCCccceeeEEEEeccccccC--CCC-ccHHHHHHHHH
Q 021099 225 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ--PYV-QNQELLKYIVD 277 (317)
Q Consensus 225 ~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~--~~~-~~~~ii~~~~~ 277 (317)
....++|.|.. ...+..++.|+.+++|++++++.++ ++. .+..++..+.+
T Consensus 113 ~~~~~~f~~~~---~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~ 165 (171)
T 1q27_A 113 SSFMCVYELRS---DATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRR 165 (171)
T ss_dssp SSEEEEEEEEC---CCCCCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred ccEEEEEEEEE---CCccccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHH
Confidence 23566777755 3344556788999999999999853 222 33555555544
No 52
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.77 E-value=1.3e-17 Score=145.56 Aligned_cols=129 Identities=18% Similarity=0.282 Sum_probs=84.8
Q ss_pred ceeEEEEEEEeCCc-eEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCc-cceeE----EEEEEeccc
Q 021099 148 HRVGVGAFVMNGKR-EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSID-TEFVE----VLAFRQSHQ 221 (317)
Q Consensus 148 ~~v~v~~iv~~~~g-~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~-~~~~~----~l~~~~~~~ 221 (317)
..++++++|++.++ +|||++++. .|.|.+|||++|+||++.+||+||++||||+. +.... .+.......
T Consensus 44 ~h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 118 (197)
T 3fcm_A 44 AHLTSSAFAVNKERNKFLMIHHNI-----YNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNG 118 (197)
T ss_dssp EEEEEEEEEECTTSCEEEEEEETT-----TTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECC
T ss_pred ccEEEEEEEEECCCCEEEEEEecC-----CCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecC
Confidence 34577888888765 999999873 47999999999999999999999999999998 43211 111111110
Q ss_pred ----C----CCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHHhc
Q 021099 222 ----S----FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSAK 282 (317)
Q Consensus 222 ----~----~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l~~ 282 (317)
+ ......++|++... ....+..+++|+.+++|++++++.++... ...++++.+++.+..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~ 187 (197)
T 3fcm_A 119 HIKRGKYVSSHLHLNLTYLIECS-EDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQ 187 (197)
T ss_dssp EEETTEEECCEEEEEEEEEEECC-TTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC-
T ss_pred ccccCcccCCceeEEEEEEEEeC-CCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhc
Confidence 0 00112255566443 22344567789999999999999987665 4556677776665543
No 53
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.76 E-value=5.1e-18 Score=147.34 Aligned_cols=108 Identities=22% Similarity=0.219 Sum_probs=79.5
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCc----
Q 021099 150 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFE---- 225 (317)
Q Consensus 150 v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~---- 225 (317)
..++++|.+ +++|||++|.. .|.|.+|||++|+||++.+||+||++||||+.+....+++..........
T Consensus 5 ~v~~~vi~~-~~~vLL~~r~~-----~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 78 (188)
T 3fk9_A 5 RVTNCIVVD-HDQVLLLQKPR-----RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVS 78 (188)
T ss_dssp EEEEEEEEE-TTEEEEEECTT-----TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEE
T ss_pred EEEEEEEEE-CCEEEEEEeCC-----CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceE
Confidence 345556665 68999999863 58999999999999999999999999999999988888766554432222
Q ss_pred -eEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 226 -KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 226 -~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
...++|.|.. ..... ....|..+++|++++++.++++.
T Consensus 79 ~~~~~~f~a~~--~~~~~-~~~~e~~~~~W~~~~el~~~~l~ 117 (188)
T 3fk9_A 79 EWMLFTFKATE--HEGEM-LKQSPEGKLEWKKKDEVLELPMA 117 (188)
T ss_dssp EEEEEEEEESC--EESCC-CSEETTEEEEEEEGGGGGGSCCC
T ss_pred EEEEEEEEEEC--CCCCC-cCCCCCEeEEEEEHHHhhhCCCC
Confidence 1345555532 22222 22344568999999999998886
No 54
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.76 E-value=4.1e-18 Score=142.09 Aligned_cols=111 Identities=19% Similarity=0.299 Sum_probs=83.3
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC----
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF---- 223 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~---- 223 (317)
..++++++|++ +++|||++| .|.|.+|||++++||++.+||+||++||||+.+....+++........
T Consensus 18 ~~~~~~~ii~~-~~~vLl~~r-------~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 89 (154)
T 2pqv_A 18 FGVRATALIVQ-NHKLLVTKD-------KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVS 89 (154)
T ss_dssp EEEEEEECCEE-TTEEEEEEE-------TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTEE
T ss_pred EeEEEEEEEEE-CCEEEEEec-------CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCCc
Confidence 34677777777 689999998 278999999999999999999999999999999887777655432221
Q ss_pred CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCC
Q 021099 224 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.+...++|.|...........+++|..+++|++++++.++++.
T Consensus 90 ~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~ 132 (154)
T 2pqv_A 90 YHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLV 132 (154)
T ss_dssp EEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEE
T ss_pred ceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcC
Confidence 1234457777654332211124567899999999999998776
No 55
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.76 E-value=4.1e-18 Score=150.47 Aligned_cols=120 Identities=13% Similarity=0.022 Sum_probs=89.2
Q ss_pred cceeEEEEEEEe-CCceEEEEEecCCCCC----CCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEeccc
Q 021099 147 SHRVGVGAFVMN-GKREVLVVQENSGRFR----GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ 221 (317)
Q Consensus 147 ~~~v~v~~iv~~-~~g~VLLv~r~~~~~~----~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~ 221 (317)
.+..+|++++++ ++++|||+++.+.+.. +.+.|++|||++|+||++.+||+||++||||+.+.....++......
T Consensus 55 ~~~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~ 134 (209)
T 1g0s_A 55 ERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASP 134 (209)
T ss_dssp ECCCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCT
T ss_pred eCCCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCC
Confidence 345688888888 5789999987665432 14789999999999999999999999999999998888887766555
Q ss_pred CCCceEEEEEEEEEccC--Cc-cccCCccceeeEEEEeccccccCCCC
Q 021099 222 SFFEKSDIFFLCMLRPL--SF-DIQKQESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 222 ~~~~~~~~~f~~~l~~~--~~-~~~~~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
+......++|+|..... .. ....+++|..++.|++++++.++...
T Consensus 135 g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 135 GGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp TTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred CccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 55556678888865321 11 12346678889999999999875433
No 56
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.76 E-value=5.4e-18 Score=141.79 Aligned_cols=127 Identities=14% Similarity=0.237 Sum_probs=91.4
Q ss_pred cceeEEEEEEEeC---CceEEEEEecCCCCCCCCcEEcceeecCCCCCHH-HHHHHHHHHHhC-CccceeEEEEEEeccc
Q 021099 147 SHRVGVGAFVMNG---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDIC-VAAVREVKEETS-IDTEFVEVLAFRQSHQ 221 (317)
Q Consensus 147 ~~~v~v~~iv~~~---~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~-eAAiREv~EEtG-l~~~~~~~l~~~~~~~ 221 (317)
.++..+.++|.++ +++|||++|.....+ .|.|+||||.+|+||++. +||+||++|||| +.+.....++...+..
T Consensus 17 ~~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~-~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~ 95 (155)
T 1x51_A 17 REESSATCVLEQPGALGAQILLVQRPNSGLL-AGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTF 95 (155)
T ss_dssp TEEEEEEEEEEEECSSSEEEEEEECCCCSTT-CSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBC
T ss_pred CeEEEEEEEEEecCCCCCEEEEEECCCCCCC-CceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEec
Confidence 3455566666664 589999999876544 599999999999999996 999999999999 8887777665555545
Q ss_pred CCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHh
Q 021099 222 SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 281 (317)
Q Consensus 222 ~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~ 281 (317)
........+|.|.... .. ....|..+++|++++++.+++++. ..+.+++.+++
T Consensus 96 ~~~~~~~~~~~~~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~~---~~~~~l~~~~~ 148 (155)
T 1x51_A 96 SHIKLTYQVYGLALEG--QT--PVTTVPPGARWLTQEEFHTAAVST---AMKKVFRVYQG 148 (155)
T ss_dssp SSCEEEEEEEEEECSS--CC--CCCCCCTTEEEEEHHHHHHSCCCH---HHHHHHHHHHH
T ss_pred CCccEEEEEEEEEEcC--CC--CCCCCCCccEEccHHHhhhcCCCH---HHHHHHHHHHh
Confidence 4455556677776532 12 233567789999999999998862 23344444443
No 57
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.76 E-value=4.3e-18 Score=141.99 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=82.5
Q ss_pred CcceeEEEEEEEeCCce----EEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEeccc
Q 021099 146 ASHRVGVGAFVMNGKRE----VLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ 221 (317)
Q Consensus 146 ~~~~v~v~~iv~~~~g~----VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~ 221 (317)
.....+++++|.+ +++ ||+++|...+ + +| |.+|||++|+||++.+||+||++||||+.+....+++......
T Consensus 5 ~~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~-~-~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 80 (155)
T 2b06_A 5 QLTILTNICLIED-LETQRVVMQYRAPENNR-W-SG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPL 80 (155)
T ss_dssp GCEEEEEEEEEEE-TTTTEEEEEEEC------C-CE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEEC
T ss_pred cCcEEEEEEEEEE-CCCCeEEEEEEECCCCC-C-CC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeecc
Confidence 3455677788877 455 8888887655 3 36 9999999999999999999999999999998888887766544
Q ss_pred C-CCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCc
Q 021099 222 S-FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQ 267 (317)
Q Consensus 222 ~-~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~ 267 (317)
. ......++|.|.... .. .+..|..+++|++++++.++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~~ 123 (155)
T 2b06_A 81 DTGGRYIVICYKATEFS--GT--LQSSEEGEVSWVQKDQIPNLNLAY 123 (155)
T ss_dssp TTSCEEEEEEEEECEEE--EC--CCCBTTBEEEEEEGGGGGGSCBCT
T ss_pred CCCceEEEEEEEEEecC--CC--CCCCcceeeEEeeHHHhhhCCCCh
Confidence 2 234455666664322 12 234678899999999999988763
No 58
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.75 E-value=1.8e-17 Score=140.85 Aligned_cols=114 Identities=19% Similarity=0.264 Sum_probs=79.3
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEE
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 228 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 228 (317)
.+.++++|++.++++||++|+ .|.|.+|||++|+||++.+||+||++||||+.+.....++...... ...
T Consensus 15 ~~~~~~~ii~~~~~vLL~~r~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~----~~~ 84 (163)
T 3f13_A 15 LARRATAIIEMPDGVLVTASR------GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPF----NAH 84 (163)
T ss_dssp CEEEEEEECEETTEEEEEECC---------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSS----EEE
T ss_pred ceEEEEEEEEeCCEEEEEEEC------CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCC----eEE
Confidence 345555566667899999986 3789999999999999999999999999999998888876544322 556
Q ss_pred EEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHH
Q 021099 229 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVD 277 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~ 277 (317)
.+|+|.. .+.+... +|+.+++|++ .+...+++. ....++..+.+
T Consensus 85 ~~f~~~~---~~~~~~~-~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~ 129 (163)
T 3f13_A 85 KVYLCIA---QGQPKPQ-NEIERIALVS-SPDTDMDLFVEGRAILRRYAR 129 (163)
T ss_dssp EEEEEEC----CCCCCC-TTCCEEEEES-STTCSSCBCHHHHHHHHHHHH
T ss_pred EEEEEEE---CCcCccC-CCceEEEEEC-cccccCCCCHHHHHHHHHHHH
Confidence 7777754 2333333 4899999999 444444544 33444444433
No 59
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.75 E-value=2.3e-18 Score=153.31 Aligned_cols=133 Identities=17% Similarity=0.129 Sum_probs=85.6
Q ss_pred EeecCCCCCCCCCCCcceeEEEEEEEe-CCceEEEEEecCCCCC------------------------------CCCcEE
Q 021099 132 VYWIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFR------------------------------GTGIWK 180 (317)
Q Consensus 132 ~~wl~~~~~~~p~~~~~~v~v~~iv~~-~~g~VLLv~r~~~~~~------------------------------~~g~W~ 180 (317)
....+++......+..+..+|++++++ .++++||+++.+.+.. .++.|+
T Consensus 19 ~~~~~~G~~~~~e~v~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~we 98 (218)
T 3q91_A 19 YFQSMNGAQKSWDFMKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVE 98 (218)
T ss_dssp ----------------CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEE
T ss_pred EEECCCCCEEEEEEEEcCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEE
Confidence 333466655555556667789999998 4589999987654321 147999
Q ss_pred cceeecCC-CCCHHHHHHHHHHHHhCCcc--ceeEEEEEEecccCCCceEEEEEEEEEccC----CccccCCccceeeEE
Q 021099 181 FPTGVVDE-GEDICVAAVREVKEETSIDT--EFVEVLAFRQSHQSFFEKSDIFFLCMLRPL----SFDIQKQESEIEAAE 253 (317)
Q Consensus 181 ~PgG~ve~-GEs~~eAAiREv~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~f~~~l~~~----~~~~~~~~~E~~~~~ 253 (317)
||||++|+ ||++.+||+||++||||+.+ ..+..++......+..+...++|+|..... ......+++|+.++.
T Consensus 99 lPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~ 178 (218)
T 3q91_A 99 LCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVV 178 (218)
T ss_dssp CEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------CCEEEE
T ss_pred CCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCcEEEEE
Confidence 99999999 99999999999999999998 777777766655555667778888876432 123446678999999
Q ss_pred EEeccccccCC
Q 021099 254 WMPLEEYAAQP 264 (317)
Q Consensus 254 Wv~~~el~~~~ 264 (317)
|++++++.++.
T Consensus 179 wv~l~el~~~i 189 (218)
T 3q91_A 179 HLPLEGAQAFA 189 (218)
T ss_dssp EEEGGGHHHHH
T ss_pred EEEHHHHHHHH
Confidence 99999998754
No 60
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.75 E-value=2.1e-18 Score=149.43 Aligned_cols=130 Identities=14% Similarity=0.163 Sum_probs=91.6
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCCCCCcEEc-ceeecCCCCCHHHHHHHHHHHHhCCcccee-EEEEEEecc---c-CC
Q 021099 150 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKF-PTGVVDEGEDICVAAVREVKEETSIDTEFV-EVLAFRQSH---Q-SF 223 (317)
Q Consensus 150 v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~-PgG~ve~GEs~~eAAiREv~EEtGl~~~~~-~~l~~~~~~---~-~~ 223 (317)
.+|+++|++.+++|||++|.......+|.|++ |||++|+||++.+||+||++||||+.+... ..++..... . ..
T Consensus 33 ~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 112 (190)
T 1hzt_A 33 LAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGI 112 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTSC
T ss_pred EEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCCC
Confidence 46788888888999999997644334699999 999999999999999999999999999877 555322211 1 11
Q ss_pred -CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCc---cHHHHHHHHHHHHhc
Q 021099 224 -FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQ---NQELLKYIVDICSAK 282 (317)
Q Consensus 224 -~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~---~~~ii~~~~~~~l~~ 282 (317)
......+|+|... ..+..+++|+.+++|++++++.++.... -.+.++.+++.++++
T Consensus 113 ~~~~~~~~f~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~ 172 (190)
T 1hzt_A 113 VENEVCPVFAARTT---SALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREAR 172 (190)
T ss_dssp EEEEECCEEEEEBC---SCCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHH
T ss_pred cceEEEEEEEEecC---CCCcCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHH
Confidence 1234566667642 2444567899999999999998752211 134455555555543
No 61
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.9e-18 Score=142.78 Aligned_cols=109 Identities=26% Similarity=0.391 Sum_probs=76.2
Q ss_pred EEEEEEEeCC-ceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEE-EEecccCCCceEE
Q 021099 151 GVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLA-FRQSHQSFFEKSD 228 (317)
Q Consensus 151 ~v~~iv~~~~-g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~-~~~~~~~~~~~~~ 228 (317)
.++++|++++ ++|||+++.. .|.|.+|||++|+||++.+||+||++||||+.+.....+. +.... ..+...
T Consensus 6 ~~~~~i~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~--~~~~~~ 78 (146)
T 2jvb_A 6 VRGAAIFNENLSKILLVQGTE-----SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERN--IQGKNY 78 (146)
T ss_dssp CEEEEEBCTTSSEEEEECCSS-----SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEE--ETTEEE
T ss_pred EEEEEEEeCCCCEEEEEEEcC-----CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccc--cCCceE
Confidence 4677788865 8999999763 4899999999999999999999999999999986432221 11111 122334
Q ss_pred EEEEEEEccCCccccC-CccceeeEEEEeccccccCCCC
Q 021099 229 IFFLCMLRPLSFDIQK-QESEIEAAEWMPLEEYAAQPYV 266 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~-~~~E~~~~~Wv~~~el~~~~~~ 266 (317)
.+|++........... +++|+.+++|++++++.++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 79 KIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp EEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGC
T ss_pred EEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcc
Confidence 4454432222222222 4688999999999999986655
No 62
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.73 E-value=1.2e-17 Score=145.26 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=87.0
Q ss_pred ceeEEEEEEEeC-CceEEEEEecCCCC----C-CCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEeccc
Q 021099 148 HRVGVGAFVMNG-KREVLVVQENSGRF----R-GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ 221 (317)
Q Consensus 148 ~~v~v~~iv~~~-~g~VLLv~r~~~~~----~-~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~ 221 (317)
+..+|++++++. ++++||+++.+.+. . +.+.|+||||++| ||++.+||+||++||||+.+.....++......
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~ 122 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSP 122 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCT
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCC
Confidence 345788888885 58999998876331 0 3478999999999 999999999999999999998888888777666
Q ss_pred CCCceEEEEEEEEEccCCcc--ccCCccceeeEEEEeccccccCC
Q 021099 222 SFFEKSDIFFLCMLRPLSFD--IQKQESEIEAAEWMPLEEYAAQP 264 (317)
Q Consensus 222 ~~~~~~~~~f~~~l~~~~~~--~~~~~~E~~~~~Wv~~~el~~~~ 264 (317)
+......++|++........ ....++|+.+++|++++++.++.
T Consensus 123 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 167 (191)
T 3o6z_A 123 GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMI 167 (191)
T ss_dssp TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHH
T ss_pred CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHH
Confidence 66667778888865432110 01126889999999999998753
No 63
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.72 E-value=1.6e-17 Score=146.80 Aligned_cols=104 Identities=17% Similarity=0.201 Sum_probs=79.3
Q ss_pred ceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEEEEEEEEEccCCc
Q 021099 161 REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDIFFLCMLRPLSF 240 (317)
Q Consensus 161 g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~l~~~~~ 240 (317)
++|||+++.+.+. +++.|+||||++|+||++.+||+||++||||+.+....+++.........+...++|++.+.....
T Consensus 77 ~~vlLv~q~R~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~ 155 (212)
T 2dsc_A 77 ECIVLVKQFRPPM-GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDA 155 (212)
T ss_dssp CEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCCEEEEEEEEEETTSG
T ss_pred cEEEEEEeecCCC-CCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCceEEEEEEEEeCccc
Confidence 5899998765443 347899999999999999999999999999999988877755544444445566777776543221
Q ss_pred -----cccCCccceeeEEEEeccccccCCC
Q 021099 241 -----DIQKQESEIEAAEWMPLEEYAAQPY 265 (317)
Q Consensus 241 -----~~~~~~~E~~~~~Wv~~~el~~~~~ 265 (317)
....+++|..++.|++++++.++..
T Consensus 156 ~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 156 ENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp GGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred cccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 3345678999999999999987543
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.72 E-value=5e-17 Score=152.64 Aligned_cols=129 Identities=20% Similarity=0.279 Sum_probs=85.6
Q ss_pred CCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEE------EEEe
Q 021099 145 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL------AFRQ 218 (317)
Q Consensus 145 ~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l------~~~~ 218 (317)
++...++|+++|++ +++|||++|...+ +.|.|.+|||++|+||++.+||+||++||||+++....++ ..+.
T Consensus 199 ~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 275 (341)
T 2qjo_A 199 YAPTFITTDAVVVQ-AGHVLMVRRQAKP--GLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFD 275 (341)
T ss_dssp SCCCEEEEEEEEEE-TTEEEEEECCSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEEC
T ss_pred CCCCceEEEEEEEe-CCEEEEEEecCCC--CCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEe
Confidence 34456788888885 7899999998754 3689999999999999999999999999999998754332 2222
Q ss_pred cccC--CCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccC--CCC-ccHHHHHHHH
Q 021099 219 SHQS--FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ--PYV-QNQELLKYIV 276 (317)
Q Consensus 219 ~~~~--~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~--~~~-~~~~ii~~~~ 276 (317)
.... ......++|+|.+.........+++|+.+++|++++++.++ ++. ....++..++
T Consensus 276 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~ 338 (341)
T 2qjo_A 276 APGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFV 338 (341)
T ss_dssp CTTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC
T ss_pred CCCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHH
Confidence 1111 12244667777654332112245688999999999999987 444 3455555443
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.72 E-value=9.7e-17 Score=151.56 Aligned_cols=133 Identities=18% Similarity=0.310 Sum_probs=92.9
Q ss_pred CCCcceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEE----E--EEE
Q 021099 144 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEV----L--AFR 217 (317)
Q Consensus 144 ~~~~~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~----l--~~~ 217 (317)
.++...++|+++|++ +++|||++|...+ +.|.|++|||++|+||++.+||+||++||||+++....+ . ...
T Consensus 203 ~~~~~~~~v~~vv~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~ 279 (352)
T 2qjt_B 203 PFKPNFVTVDALVIV-NDHILMVQRKAHP--GKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVF 279 (352)
T ss_dssp SSCCEEEEEEEEEEE-TTEEEEEEESSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEE
T ss_pred CCCCCceEEEEEEEE-CCEEEEEEEcCCC--CCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEe
Confidence 345556778888885 7899999998765 358999999999999999999999999999999874322 1 122
Q ss_pred ecccCC--CceEEEEEEEEEccCCcccc-CCccceeeEEEEec-cccccC--CCC-ccHHHHHHHHHHH
Q 021099 218 QSHQSF--FEKSDIFFLCMLRPLSFDIQ-KQESEIEAAEWMPL-EEYAAQ--PYV-QNQELLKYIVDIC 279 (317)
Q Consensus 218 ~~~~~~--~~~~~~~f~~~l~~~~~~~~-~~~~E~~~~~Wv~~-~el~~~--~~~-~~~~ii~~~~~~~ 279 (317)
...... .....++|++.+......+. .+++|+.+++|+++ +++.++ ++. .+..++..+++.+
T Consensus 280 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l 348 (352)
T 2qjt_B 280 DYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEEC 348 (352)
T ss_dssp CCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHT
T ss_pred cCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHh
Confidence 211111 12355677776643321122 34689999999999 999986 333 4566666666554
No 66
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.68 E-value=2.3e-16 Score=150.27 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=85.6
Q ss_pred CCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCC-------------Cc
Q 021099 159 GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF-------------FE 225 (317)
Q Consensus 159 ~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~-------------~~ 225 (317)
++.+|||++|.. .+.|.||||++|+||++.+||+||++||||+++....+++........ ..
T Consensus 36 ~~~~vLLv~r~~-----~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~ 110 (364)
T 3fjy_A 36 DSIEVCIVHRPK-----YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADT 110 (364)
T ss_dssp TTEEEEEEEETT-----TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC--------------------
T ss_pred CceEEEEEEcCC-----CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCc
Confidence 345999999963 489999999999999999999999999999999888888765543321 13
Q ss_pred eEEEEEEEEEccCC----------ccccCCccceeeEEEEeccccccCCCC-ccHHHHHHHHHHHH
Q 021099 226 KSDIFFLCMLRPLS----------FDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 280 (317)
Q Consensus 226 ~~~~~f~~~l~~~~----------~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~~~~~l 280 (317)
....+|++...... .....+++|+.+++|++++++.++... .++.++..+.+.+.
T Consensus 111 ~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~r~il~~~~~~l~ 176 (364)
T 3fjy_A 111 KHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQ 176 (364)
T ss_dssp -CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcchhhHHHHHHHHHHhc
Confidence 55677777654321 112356689999999999999987654 55667777766654
No 67
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.66 E-value=5.8e-17 Score=143.30 Aligned_cols=110 Identities=22% Similarity=0.240 Sum_probs=75.6
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCC--CCCCcEEc-ceeecCCCCC------HHHHHHHHHHHHhCCccceeEEEEEEec
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRF--RGTGIWKF-PTGVVDEGED------ICVAAVREVKEETSIDTEFVEVLAFRQS 219 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~--~~~g~W~~-PgG~ve~GEs------~~eAAiREv~EEtGl~~~~~~~l~~~~~ 219 (317)
.+...+ |++++++|||++|...+. .-.|.|.+ |||++|+||+ +.+||+||++||||+++....++++...
T Consensus 68 q~i~~~-II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~ 146 (211)
T 3e57_A 68 QVIPYV-VIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINS 146 (211)
T ss_dssp EEEEEE-EEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEC
T ss_pred ceEEEE-EEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEec
Confidence 333444 444579999999986541 01378999 9999999998 4999999999999999988888888765
Q ss_pred ccCCCc--eEEEEEEEEEccCCccccCCccceeeEEEEeccccccC
Q 021099 220 HQSFFE--KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 263 (317)
Q Consensus 220 ~~~~~~--~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 263 (317)
.....+ ....+|.|... . ..+++.|..+++|++++++.++
T Consensus 147 ~~~~~~~~~l~~~f~~~~~--~--g~~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 147 STTEVSRVHLGALFLGRGK--F--FSVKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp CSSHHHHTEEEEEEEEEEE--E--EEESCTTTCEEEEEEHHHHHHH
T ss_pred cCCCCCeEEEEEEEEEEeC--C--ceeCCCCeEEEEEEEHHHHHHh
Confidence 322111 23346777643 2 2345677789999999999886
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.66 E-value=6.8e-16 Score=147.58 Aligned_cols=118 Identities=18% Similarity=0.156 Sum_probs=93.3
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCccceeEEEEEEecccCCCceEE
Q 021099 149 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 228 (317)
Q Consensus 149 ~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 228 (317)
+..++++|.|.+|+|||+||.....+ +|.|+||||++|+| ++.+|++||++||||+.+.....++...+...++....
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~g~~-~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~ 317 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDSTGLL-ANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQL 317 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSSSTT-TTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEE
T ss_pred EEEEEEEEEeCCCEEEEEECCCCCCc-CCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEE
Confidence 44556667777899999999876554 59999999999999 99999999999999999988887777667666666777
Q ss_pred EEEEEEEccCCccccCCccceeeEEEEeccccccCCCC-ccHHHHHHH
Q 021099 229 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYI 275 (317)
Q Consensus 229 ~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~ii~~~ 275 (317)
.+|.|..... ..|..+++|++++++.+++++ ...++++.+
T Consensus 318 ~~~~~~~~~~-------~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l 358 (369)
T 3fsp_A 318 TVFPGRLVHG-------GPVEEPYRLAPEDELKAYAFPVSHQRVWREY 358 (369)
T ss_dssp EEEEEEECCS-------SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHH
T ss_pred EEEEEEEcCC-------CCCccccEEeeHHHhhhCCCCHHHHHHHHHH
Confidence 7887765331 357788999999999999886 334444443
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.61 E-value=7.7e-15 Score=131.96 Aligned_cols=111 Identities=19% Similarity=0.216 Sum_probs=81.8
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCCCCCcEEcc-eeecCCC------CC---HHHHHHHHHHHHhCCccce-----eEEE
Q 021099 150 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFP-TGVVDEG------ED---ICVAAVREVKEETSIDTEF-----VEVL 214 (317)
Q Consensus 150 v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~P-gG~ve~G------Es---~~eAAiREv~EEtGl~~~~-----~~~l 214 (317)
.++.++|++.+|+|||+||.......+|.|.+| ||++++| |+ +.+||+||++||||+.+.. ...+
T Consensus 60 ~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l 139 (235)
T 2dho_A 60 RAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYL 139 (235)
T ss_dssp EEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEE
T ss_pred EEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEE
Confidence 467778889889999999987655567999999 5999999 88 5999999999999998752 3455
Q ss_pred EEEeccc-CC----CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccC
Q 021099 215 AFRQSHQ-SF----FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 263 (317)
Q Consensus 215 ~~~~~~~-~~----~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 263 (317)
+.+.... .. .+...++|+|.. ..++.++++|+.+++|++++++.++
T Consensus 140 ~~~~y~~~~~~~~~~~e~~~vf~~~~---~~~~~~~~~Ev~~~~wv~~~el~~~ 190 (235)
T 2dho_A 140 TRIHYKAQSDGIWGEHEIDYILLVRM---NVTLNPDPNEIKSYCYVSKEELKEL 190 (235)
T ss_dssp EEEEEEEECSSSBEEEEEEEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEeccCCCccceeEEEEEEEEEE---CCCCcCChHHEEEEEEEcHHHHHHH
Confidence 4332211 11 122345666653 2345567899999999999999764
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.59 E-value=8.9e-15 Score=132.42 Aligned_cols=111 Identities=16% Similarity=0.150 Sum_probs=81.7
Q ss_pred eEEEEEEEeCCceEEEEEecCCCCCCCCcEEcce-eecCCC------CCH---HHHHHHHHHHHhCCccce-----eEEE
Q 021099 150 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPT-GVVDEG------EDI---CVAAVREVKEETSIDTEF-----VEVL 214 (317)
Q Consensus 150 v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~Pg-G~ve~G------Es~---~eAAiREv~EEtGl~~~~-----~~~l 214 (317)
.++.++|+|.+|+|||+||.......+|.|.+|+ |++++| |++ .+||+||++||||+.+.. ...+
T Consensus 71 ~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l 150 (246)
T 2pny_A 71 RAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFM 150 (246)
T ss_dssp EEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEE
T ss_pred EEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEEE
Confidence 4677788898899999999876554679999985 999999 887 999999999999998652 3445
Q ss_pred EEEecc-cCC----CceEEEEEEEEEccCCccccCCccceeeEEEEeccccccC
Q 021099 215 AFRQSH-QSF----FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 263 (317)
Q Consensus 215 ~~~~~~-~~~----~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 263 (317)
+.+... ... .+...++|++.. ..++.++++|+.+++|++++++.++
T Consensus 151 ~~~~y~~~~~~~~~~~e~~~vf~~~~---~~~~~~~~~Ev~~~~wv~~eel~~~ 201 (246)
T 2pny_A 151 TIYHHKAKSDRIWGEHEICYLLLVRK---NVTLNPDPSETKSILYLSQEELWEL 201 (246)
T ss_dssp EEEEEEEESSSSBEEEEEEEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEEecCCCceeeeEEEEEEEEEE---CCCCCCChHHeeEEEEEeHHHHHHH
Confidence 433221 111 122345666653 2345567899999999999999764
No 71
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.59 E-value=1.7e-15 Score=133.98 Aligned_cols=105 Identities=18% Similarity=0.171 Sum_probs=77.3
Q ss_pred EEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCC-CHHHHHHHHHHHHhCCccceeE-----EEEEEecccCCCc
Q 021099 152 VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSIDTEFVE-----VLAFRQSHQSFFE 225 (317)
Q Consensus 152 v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GE-s~~eAAiREv~EEtGl~~~~~~-----~l~~~~~~~~~~~ 225 (317)
+.+++++++++|||++|. .|.|+||||++|+|| ++.+||+||++||||+.+.... .++....... ..
T Consensus 47 vv~~i~~~~~~vLl~~r~------~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~ 119 (212)
T 1u20_A 47 KLFDRVPIRRVLLMMMRF------DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QK 119 (212)
T ss_dssp EETTTEECCEEEEEEEET------TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SC
T ss_pred EEEEEEecCCEEEEEEeC------CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-Cc
Confidence 444556778899999883 488999999999999 9999999999999999987553 3444333333 45
Q ss_pred eEEEEEEEEEccCCc--------cccCCccceeeEEEEeccccccC
Q 021099 226 KSDIFFLCMLRPLSF--------DIQKQESEIEAAEWMPLEEYAAQ 263 (317)
Q Consensus 226 ~~~~~f~~~l~~~~~--------~~~~~~~E~~~~~Wv~~~el~~~ 263 (317)
...++|+|.+..... ....++.|..++.|+|++++.+.
T Consensus 120 ~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 120 CVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 677888886532111 11124578899999999999764
No 72
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.51 E-value=1.3e-13 Score=127.68 Aligned_cols=113 Identities=13% Similarity=0.181 Sum_probs=73.9
Q ss_pred eEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhCCcc------------ceeEEE--------EEEeccc
Q 021099 162 EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT------------EFVEVL--------AFRQSHQ 221 (317)
Q Consensus 162 ~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtGl~~------------~~~~~l--------~~~~~~~ 221 (317)
+|||++|.. .|.|.+|||++|+||++.+||+||++||||+.+ ....++ .......
T Consensus 140 ~vLl~~r~~-----~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dp 214 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDP 214 (292)
T ss_dssp EEEEEECTT-----TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCT
T ss_pred EEEEEEecC-----CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCC
Confidence 699999974 378999999999999999999999999999983 111111 1111111
Q ss_pred CC--C-ceEEEEEEEEEccCC---ccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHH
Q 021099 222 SF--F-EKSDIFFLCMLRPLS---FDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICS 280 (317)
Q Consensus 222 ~~--~-~~~~~~f~~~l~~~~---~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l 280 (317)
.. . ....++|.+...... .......+|+.+++|++++++..+... ...+++.+++...
T Consensus 215 r~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L~~~-h~~il~~~~~~~~ 278 (292)
T 1q33_A 215 RNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKLYAS-HSQFIKLVAEKRD 278 (292)
T ss_dssp TCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCCSTT-HHHHHHHHHHHHT
T ss_pred CCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcccCHh-HHHHHHHHHHHhc
Confidence 11 0 223445555432111 111234688999999999999986443 3677777766543
No 73
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.51 E-value=3.5e-13 Score=125.04 Aligned_cols=177 Identities=11% Similarity=0.112 Sum_probs=109.6
Q ss_pred CcEEEecCCCCCHHHHHHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecC--CceEEEEeecCCCCCCC
Q 021099 65 GGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAE--PNYLMLVYWIPGGANTL 142 (317)
Q Consensus 65 ~gv~v~~~~~~~~~~f~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~--~~~~~l~~wl~~~~~~~ 142 (317)
++|++... ..+.++=.++|+..+..|++++.=.=| ..++.++ -... .-...+.+ .. .
T Consensus 53 ~~v~l~~~-~~~~~~rt~~~~~~~~~~~~~g~~~gw------r~E~~~V--------~~~~~~~~~~~~eR----~~--~ 111 (300)
T 3dup_A 53 DAVLLSAS-LRTPQSRTRAVADVVDRLADEGVVPAP------RGELYRV--------NQSWGEPTLMLLDR----AV--V 111 (300)
T ss_dssp SEEEECTT-CCSHHHHHHHHHHHHHHHHHTTSSCCC------CSCEEEE--------CSSTTSCCCEEEEG----GG--T
T ss_pred CEEEEecC-CCCHHHHHHHHHHHHHHHHHcCCCCcc------ccccEEe--------ecCCCCeeeEEEEh----hh--c
Confidence 45555432 357788889999999999998631112 1122111 1111 11222211 11 1
Q ss_pred CCCCcceeEEEEEEEeCCc---eEEEEEecCCCCCCCCcE-EcceeecCCCCCHHHHHHHHHHHHhCCcccee---EEEE
Q 021099 143 PANASHRVGVGAFVMNGKR---EVLVVQENSGRFRGTGIW-KFPTGVVDEGEDICVAAVREVKEETSIDTEFV---EVLA 215 (317)
Q Consensus 143 p~~~~~~v~v~~iv~~~~g---~VLLv~r~~~~~~~~g~W-~~PgG~ve~GEs~~eAAiREv~EEtGl~~~~~---~~l~ 215 (317)
+..-....+|-+.+++.++ ++|+.||.......+|.| .+|||++++||++.+||+||+.||+|+.++.. ...+
T Consensus 112 ~~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g 191 (300)
T 3dup_A 112 PTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVG 191 (300)
T ss_dssp GGGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEE
T ss_pred cccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccc
Confidence 1112223466777777665 999999998877779999 58999999999999999999999999987532 2222
Q ss_pred EE---ec-ccCCCceEEEEEEEEEccCCccccCCccceeeEEEEeccccccC
Q 021099 216 FR---QS-HQSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 263 (317)
Q Consensus 216 ~~---~~-~~~~~~~~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 263 (317)
.. .. ..+......++|.+.+. ....+.++++|+.+++|++++|+.++
T Consensus 192 ~i~y~~~~~~G~~~E~~~vy~~~l~-~~~~p~~~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 192 AITYCMESPAGIKPDTLFLYDLALP-EDFRPHNTDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEECC-TTCCCCCTTSSEEEEEEEEHHHHHHH
T ss_pred eEEEEEecCCCeEEEEEEEEEEEec-CCCcCCCCchHhheEEEECHHHHHHH
Confidence 21 11 11112223344444443 23345678899999999999998763
No 74
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.41 E-value=1.6e-12 Score=116.62 Aligned_cols=113 Identities=24% Similarity=0.296 Sum_probs=77.5
Q ss_pred ceeEEEEEEEeCC----ceEEEEEecCCCCCCCCcEEcceeecCCCCC--------------------HHHHHHHHHHHH
Q 021099 148 HRVGVGAFVMNGK----REVLVVQENSGRFRGTGIWKFPTGVVDEGED--------------------ICVAAVREVKEE 203 (317)
Q Consensus 148 ~~v~v~~iv~~~~----g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs--------------------~~eAAiREv~EE 203 (317)
.+.++.++++++. .+|||+||.......+|.|.||||++|+||+ +..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 4566666666532 3899999988765457999999999999987 589999999999
Q ss_pred hCCccceeE------------------------------------------EEEE-EecccCCCceEEEEEEEEEccCCc
Q 021099 204 TSIDTEFVE------------------------------------------VLAF-RQSHQSFFEKSDIFFLCMLRPLSF 240 (317)
Q Consensus 204 tGl~~~~~~------------------------------------------~l~~-~~~~~~~~~~~~~~f~~~l~~~~~ 240 (317)
||+.+.... .++. .............||++.+. ...
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lp-q~~ 165 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQ-HLG 165 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECS-SCC
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECC-CCC
Confidence 999753211 0111 11111112234567776654 222
Q ss_pred cccCCccceeeEEEEeccccc
Q 021099 241 DIQKQESEIEAAEWMPLEEYA 261 (317)
Q Consensus 241 ~~~~~~~E~~~~~Wv~~~el~ 261 (317)
....+..|+.+++|++++|+.
T Consensus 166 ~v~~d~~E~~~~~W~~p~eal 186 (232)
T 3qsj_A 166 EPRLHGAELDAALWTPARDML 186 (232)
T ss_dssp CCCCCSSSEEEEEEEEHHHHH
T ss_pred CCCCCCCceEEEEEEcHHHHH
Confidence 134578999999999999995
No 75
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.40 E-value=4.9e-13 Score=118.74 Aligned_cols=95 Identities=22% Similarity=0.217 Sum_probs=66.0
Q ss_pred eEEEEEecCCCCCCCCcEEcceeecCCCC-CHHHHHHHHHHHHhCCccce--eEEEEEEec-ccCCCceEEEEEEEEEcc
Q 021099 162 EVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSIDTEF--VEVLAFRQS-HQSFFEKSDIFFLCMLRP 237 (317)
Q Consensus 162 ~VLLv~r~~~~~~~~g~W~~PgG~ve~GE-s~~eAAiREv~EEtGl~~~~--~~~l~~~~~-~~~~~~~~~~~f~~~l~~ 237 (317)
++|++.|. .+.|+||||++|+|| ++.+||+||++||||+.+.. +..+..... .........++|.|.+..
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~ 139 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTL 139 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCH
T ss_pred cEEEEEcc------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEecc
Confidence 56666654 378999999999999 99999999999999999874 222222221 122235667788886543
Q ss_pred CCc--------cccCCccceeeEEEEecccccc
Q 021099 238 LSF--------DIQKQESEIEAAEWMPLEEYAA 262 (317)
Q Consensus 238 ~~~--------~~~~~~~E~~~~~Wv~~~el~~ 262 (317)
... .....+.|..++.|+|++++.+
T Consensus 140 ~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 140 EELLAVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp HHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred ccceecccccccccccCCceeeEEEEEHHHhhh
Confidence 211 0122357889999999999973
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.29 E-value=1.2e-11 Score=115.79 Aligned_cols=111 Identities=11% Similarity=0.193 Sum_probs=81.1
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHh-CCccceeEEEEEEecccCCCce
Q 021099 148 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEET-SIDTEFVEVLAFRQSHQSFFEK 226 (317)
Q Consensus 148 ~~v~v~~iv~~~~g~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEt-Gl~~~~~~~l~~~~~~~~~~~~ 226 (317)
+++.|++++.+ +|+|||+ . ..| |.+|||.++.+++ ++|+||++||| |++++...++++++... .+.
T Consensus 182 p~~~vgaii~~-~g~vLL~--~-----~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v~~~~~--~~~ 248 (321)
T 3rh7_A 182 GEIRLGAVLEQ-QGAVFLA--G-----NET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSVYEDKS--DGR 248 (321)
T ss_dssp SCEEEEEEEES-SSCEEEB--C-----SSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEEEECTT--TCC
T ss_pred CcceEEEEEEE-CCEEEEe--e-----CCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeeceEEEEEEcCC--Cce
Confidence 45667776665 6899999 2 247 9999986654444 59999999997 99999999999887654 334
Q ss_pred EEEEEEEEEccCCccccCCccceeeEEEEeccccccCCCCccHHHHHHHHHHHHhc
Q 021099 227 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 282 (317)
Q Consensus 227 ~~~~f~~~l~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~ii~~~~~~~l~~ 282 (317)
..++|.|.+... . ..+++|+++++++.+.+. .+-++.+++++++-
T Consensus 249 ~~i~f~~~~~~g--~-------~~e~~~f~~~elp~~~~~--~~~~~~~L~~y~~e 293 (321)
T 3rh7_A 249 QNIVYHALASDG--A-------PRQGRFLRPAELAAAKFS--SSATADIINRFVLE 293 (321)
T ss_dssp EEEEEEEEECSS--C-------CSSSEEECHHHHTTCEES--SHHHHHHHHHHHHT
T ss_pred EEEEEEEEeCCC--C-------eeeeEEECHHHCCCcccC--CHHHHHHHHHHHHH
Confidence 567888876432 2 267899999999987553 23455566666653
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.98 E-value=2.9e-10 Score=97.87 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=64.0
Q ss_pred eEEEEEecCCCCCCCCcEEcceeecCCCC-CHHHHHHHHHHHHhCC-ccceeEEEEEEecccCCCceEEEEEEEEEccCC
Q 021099 162 EVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSI-DTEFVEVLAFRQSHQSFFEKSDIFFLCMLRPLS 239 (317)
Q Consensus 162 ~VLLv~r~~~~~~~~g~W~~PgG~ve~GE-s~~eAAiREv~EEtGl-~~~~~~~l~~~~~~~~~~~~~~~~f~~~l~~~~ 239 (317)
.|||+.|. .|.|+||||+||+|| ++++|+.||+.||+|+ .++...++......+. .....++|.|.+....
T Consensus 45 ~iLmQ~R~------~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp-~~V~LHfY~crl~~Ge 117 (214)
T 3kvh_A 45 SVLMQMRF------DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGP-HRVVAHLYARQLTLEQ 117 (214)
T ss_dssp EEEEEEET------TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC-----CEEEEEEEEECCHHH
T ss_pred eEEEeeee------CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCC-CEEEEEEEEEEeeCCc
Confidence 36676665 389999999999999 9999999999999997 5666666655444433 3567888888764322
Q ss_pred cc------ccC--CccceeeEEEEecccccc
Q 021099 240 FD------IQK--QESEIEAAEWMPLEEYAA 262 (317)
Q Consensus 240 ~~------~~~--~~~E~~~~~Wv~~~el~~ 262 (317)
.. ... -..|.....-||+-.+.+
T Consensus 118 ~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D 148 (214)
T 3kvh_A 118 LHAVEISAVHSRDHGLEVLGLVRVPLYTQKD 148 (214)
T ss_dssp HHHHHHHHHTSTTBTTTEEEEEEECCCBCTT
T ss_pred cchhhhcccCCcccCceecceEEeeeEEecc
Confidence 10 111 236788888898877764
No 78
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.97 E-value=5e-09 Score=91.10 Aligned_cols=62 Identities=26% Similarity=0.336 Sum_probs=47.8
Q ss_pred eeEEEEEEE-eCCc--eEEEEEecCCCCCCCCcEEcceeecCCCCCHHHHHHHHHHHHhC------CccceeEEEEE
Q 021099 149 RVGVGAFVM-NGKR--EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETS------IDTEFVEVLAF 216 (317)
Q Consensus 149 ~v~v~~iv~-~~~g--~VLLv~r~~~~~~~~g~W~~PgG~ve~GEs~~eAAiREv~EEtG------l~~~~~~~l~~ 216 (317)
+++|.++++ ++.+ +|||+|+. .+.|.+|||.+|+||+..+|+.||+.||+| ...+..+.++.
T Consensus 58 R~sV~avil~~~~~~phVLLlq~~------~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~ 128 (208)
T 3bho_A 58 RRTVEGVLIVHEHRLPHVLLLQLG------TTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN 128 (208)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEE------TTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEE
T ss_pred ceEEEEEEEEcCCCCcEEEEEEcC------CCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEE
Confidence 456666555 3333 79999985 268999999999999999999999999999 45556666665
No 79
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=33.11 E-value=1e+02 Score=23.87 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCceEEEE
Q 021099 81 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLV 132 (317)
Q Consensus 81 ~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~~~~l~ 132 (317)
+..|+..+...++.+.+.+++.+............+.||.......+...|.
T Consensus 129 ~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~~~~~~m~ 180 (183)
T 3fix_A 129 KTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTDGSDFIME 180 (183)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEecccccchhhc
Confidence 4556666666677888889999988888888888899999988877655554
No 80
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1
Probab=27.40 E-value=1.2e+02 Score=22.98 Aligned_cols=51 Identities=10% Similarity=-0.002 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCceEEEEee
Q 021099 83 LLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYW 134 (317)
Q Consensus 83 ~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~w 134 (317)
.|+..+..-++.+ ..|++.+...........-+.||........+..|.+.
T Consensus 106 Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~~~~~~~m~~~ 156 (159)
T 1wwz_A 106 LLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKR 156 (159)
T ss_dssp HHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEccccccHHHHHHh
Confidence 3444445556667 88988888777777777778999988877777766553
No 81
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=23.14 E-value=1.9e+02 Score=21.74 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCceEEEEe
Q 021099 82 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVY 133 (317)
Q Consensus 82 ~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~ 133 (317)
+.|+..+...++.+...|++.+............+.||.......++..+.+
T Consensus 123 ~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~ek 174 (179)
T 2oh1_A 123 QMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKKNGFYLYQK 174 (179)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEecccCChhhhhh
Confidence 3455555556677888899888888777777888899988877666555544
No 82
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=22.90 E-value=1.5e+02 Score=25.93 Aligned_cols=55 Identities=7% Similarity=0.020 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCceEEEEeecC
Q 021099 82 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIP 136 (317)
Q Consensus 82 ~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~wl~ 136 (317)
+.++..+...+..+...|++.+..++.......-+.||...+...++..+...++
T Consensus 252 ~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~l~ 306 (333)
T 4ava_A 252 FLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVP 306 (333)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCEECSTTEEEEEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCceeccCCCEEEEEEecC
Confidence 3455555666777889999999999988888889999998887777777665554
No 83
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=22.69 E-value=2e+02 Score=20.92 Aligned_cols=44 Identities=9% Similarity=0.067 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeec
Q 021099 81 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHA 124 (317)
Q Consensus 81 ~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~ 124 (317)
++.++..+...++.+.+.+++.+............+.||.....
T Consensus 94 ~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 137 (162)
T 2fia_A 94 SLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHE 137 (162)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEee
Confidence 34455555666677788899998888877778888899976654
No 84
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=21.84 E-value=2.3e+02 Score=20.83 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCc
Q 021099 81 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPN 127 (317)
Q Consensus 81 ~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~ 127 (317)
+..|+..+...+..+.+.|++.+............+.||........
T Consensus 93 ~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~~~~ 139 (162)
T 3lod_A 93 EKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFAP 139 (162)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECCCTT
T ss_pred HHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEcccccc
Confidence 44555556666777888899999888887888888999988766433
No 85
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.44 E-value=2e+02 Score=20.96 Aligned_cols=44 Identities=16% Similarity=0.003 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeec
Q 021099 81 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHA 124 (317)
Q Consensus 81 ~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~ 124 (317)
...++..+...++.+.+.+++.+............+.||.....
T Consensus 87 ~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 130 (157)
T 1mk4_A 87 KQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKG 130 (157)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcCC
Confidence 44455555666777788899998888878888888999988764
No 86
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=21.30 E-value=1.9e+02 Score=21.61 Aligned_cols=51 Identities=6% Similarity=-0.048 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHcCcceeeEEcchhhhcchhHHHhcCceeeecCCceEEE
Q 021099 81 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLML 131 (317)
Q Consensus 81 ~~~l~~sl~~w~~~~~~~vwl~l~~~~~~l~~~~~~~gf~~h~~~~~~~~l 131 (317)
+..+...+..-+..+.+.|++.+............+.||.......++...
T Consensus 109 ~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~ 159 (164)
T 3eo4_A 109 RHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKKGRENEWI 159 (164)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSTTEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeeechhhhh
Confidence 334555555557778899999999998888888999999999888876554
Done!