Query 021101
Match_columns 317
No_of_seqs 186 out of 681
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 12:45:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021101.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021101hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di4_A Zinc protease, cell div 100.0 1.8E-34 6.2E-39 266.6 14.7 148 164-315 10-201 (238)
2 2ce7_A Cell division protein F 99.9 2.5E-25 8.4E-30 222.6 15.4 147 164-314 266-457 (476)
3 2dhr_A FTSH; AAA+ protein, hex 99.9 3E-24 1E-28 215.8 13.8 147 164-315 281-468 (499)
4 3b4r_A Putative zinc metallopr 96.8 0.00078 2.7E-08 61.1 4.0 56 172-241 50-105 (224)
5 1q08_A Zn(II)-responsive regul 74.4 9.5 0.00033 28.9 6.8 51 250-302 1-60 (99)
6 3gp4_A Transcriptional regulat 70.8 21 0.00072 29.5 8.6 64 249-314 43-115 (142)
7 2jsd_A Matrix metalloproteinas 66.8 2.3 7.8E-05 35.4 1.8 15 169-183 107-121 (160)
8 2xs4_A Karilysin protease; hyd 64.6 2.7 9.1E-05 35.4 1.8 15 168-182 113-127 (167)
9 2ovx_A Matrix metalloproteinas 62.0 2.6 9E-05 35.4 1.3 14 169-182 110-123 (159)
10 1hy7_A Stromelysin-1, MMP-3; m 60.9 3.4 0.00012 35.1 1.8 15 169-183 112-126 (173)
11 1hv5_A Stromelysin 3; inhibiti 58.5 3.3 0.00011 34.9 1.3 15 168-182 111-125 (165)
12 1cge_A Fibroblast collagenase; 58.1 3.5 0.00012 34.9 1.4 14 169-182 110-123 (168)
13 1i76_A MMP-8;, neutrophil coll 55.3 5 0.00017 33.8 1.9 15 169-183 111-125 (163)
14 3gpv_A Transcriptional regulat 54.0 60 0.002 26.7 8.4 65 249-315 57-130 (148)
15 3cqb_A Probable protease HTPX 51.1 6 0.00021 31.1 1.6 19 165-183 78-96 (107)
16 1y93_A Macrophage metalloelast 48.1 6.1 0.00021 33.2 1.3 14 169-182 107-120 (159)
17 1r8e_A Multidrug-efflux transp 47.6 25 0.00087 31.0 5.4 64 249-314 47-113 (278)
18 1rm8_A MMP-16, matrix metallop 47.3 7.7 0.00026 32.7 1.8 17 167-183 114-130 (169)
19 2y6d_A Matrilysin; hydrolase; 47.0 7.8 0.00027 33.1 1.8 15 168-182 113-127 (174)
20 1slm_A Stromelysin-1; hydrolas 46.8 6.4 0.00022 35.9 1.3 15 169-183 194-208 (255)
21 3ayu_A 72 kDa type IV collagen 46.3 6.7 0.00023 33.2 1.3 14 169-182 113-126 (167)
22 2cki_A Ulilysin; metalloprotea 42.9 7.7 0.00026 35.7 1.2 17 169-185 161-177 (262)
23 1c7k_A NCNP, zinc endoprotease 40.3 13 0.00043 31.1 2.0 14 169-182 76-89 (132)
24 1sat_A Serratia protease; para 40.1 12 0.0004 37.1 2.1 16 168-183 168-183 (471)
25 1g9k_A Serralysin; beta jelly 38.7 13 0.00043 36.8 2.1 15 169-183 162-176 (463)
26 3qao_A LMO0526 protein, MERR-l 38.3 43 0.0015 30.2 5.4 25 249-275 44-70 (249)
27 1kap_P Alkaline protease; calc 37.4 14 0.00047 36.8 2.1 15 169-183 178-192 (479)
28 1k7i_A PROC, secreted protease 36.3 15 0.0005 36.5 2.1 16 168-183 180-195 (479)
29 1q06_A Transcriptional regulat 32.9 1.9E+02 0.0065 23.2 8.5 51 249-301 41-99 (135)
30 830c_A MMP-13, MMP-13; matrix 32.2 15 0.00052 31.3 1.3 16 168-183 111-126 (168)
31 2zhg_A Redox-sensitive transcr 28.0 87 0.003 26.0 5.3 52 249-302 51-111 (154)
32 3ma2_D Matrix metalloproteinas 27.9 20 0.00068 31.0 1.3 15 168-182 120-134 (181)
33 3ba0_A Macrophage metalloelast 26.7 24 0.00082 33.5 1.7 15 169-183 106-120 (365)
34 3t15_A Ribulose bisphosphate c 25.2 28 0.00095 31.4 1.8 23 163-185 259-281 (293)
35 3edh_A Bone morphogenetic prot 25.1 26 0.0009 30.7 1.5 18 170-187 87-104 (201)
36 3lqb_A Hatching enzyme, LOC792 23.9 28 0.00097 30.6 1.5 17 170-186 93-109 (199)
37 1l6j_A Matrix metalloproteinas 22.1 26 0.0009 34.5 1.0 14 169-182 375-388 (425)
38 4aw6_A CAAX prenyl protease 1 21.6 42 0.0014 33.5 2.4 22 165-186 324-345 (482)
39 3dte_A IRRE protein; radiotole 21.4 56 0.0019 30.5 3.1 22 165-186 91-112 (301)
40 3lq0_A Proastacin; metallopept 21.4 34 0.0012 30.8 1.5 18 171-188 121-138 (235)
41 1ufi_A CENP-B, major centromer 20.9 22 0.00076 25.8 0.2 15 1-15 13-31 (64)
42 1uze_A Angiotensin converting 20.2 35 0.0012 34.4 1.5 20 172-191 343-363 (589)
No 1
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=100.00 E-value=1.8e-34 Score=266.55 Aligned_cols=148 Identities=22% Similarity=0.217 Sum_probs=119.2
Q ss_pred CCChhhhHHHHHHHhhHHHHHHHhC--CCCceEEeec-Ccc-cceecchHHHHhhhcCCCCHHHHHHHHHHHchHHHHHH
Q 021101 164 SFFPDYQERVARHEAAHFLLAYLLG--LPILGYSLDI-GKE-NVNLIDERLEKLIYSGQLDAKELDRLAVVAMAGLAAEG 239 (317)
Q Consensus 164 ~ls~~~r~RIA~HEAGHaLvAylLg--~PV~kvsI~p-G~g-gv~f~~~e~e~~~~~g~~s~~~L~r~~~VlLAGrAAE~ 239 (317)
.+++++|++||||||||||||++++ +||+||||+| |++ |+++..|+.++ ..+|+++|.+.++|+|||||||+
T Consensus 10 ~~s~~ek~~vAyHEAGHAlva~~l~~~~pV~KVTIiPRG~alG~t~~~P~ed~----~~~tk~~l~~~i~v~LgGRaAEe 85 (238)
T 2di4_A 10 TISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDK----HIYDKKDLYNKILVLLGGRAAEE 85 (238)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC----------------C----CCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEeecCCcceEEEeCCcccc----cccCHHHHHHHHHHHHhHHHHHH
Confidence 4699999999999999999999998 7999999998 532 55554554332 45799999999999999999999
Q ss_pred hhc--CC-ccchhhHHHHHHHHHH----HhCCCC------------------------C-------HHHHHHHHHHHHHH
Q 021101 240 LQY--DK-VVGQSADLFSLQRFIN----RTKPPL------------------------S-------QDQQQNLTRWAVLF 281 (317)
Q Consensus 240 lvf--G~-atGa~~Dl~~lt~i~~----~lG~~~------------------------s-------~~e~~~l~r~A~~~ 281 (317)
|+| |+ ++|++||++++|+|++ ++||+- | +.++++++++||.+
T Consensus 86 lifG~g~vttGA~~Dl~~AT~iAr~MV~~~GMs~~lG~v~~~~~~~~flg~~~~~~~~Se~ta~~iD~Ev~~il~~ay~~ 165 (238)
T 2di4_A 86 VFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMTTAVDTSPDLLREIDEEVKRIITEQYEK 165 (238)
T ss_dssp HHHHHHHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC----------CCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcccChHhHHHHHHHHHHHHHHHhCCCCCCCceeecCCccccccccccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999 65 5999999999987654 567651 1 14678899999999
Q ss_pred HHHHHHHcHHHHHHHHHHHHHhchH--HHHHHHHHh
Q 021101 282 AATLIKNNKAIHEALMAAMSKKATI--LECIEAIEN 315 (317)
Q Consensus 282 A~~LL~~~r~~leaLaeaLle~esl--~eC~~~Ie~ 315 (317)
|++||++|++.+++||++|+++||| +||.++|+.
T Consensus 166 a~~iL~~nr~~L~~lA~~Lle~EtL~~~ei~~il~~ 201 (238)
T 2di4_A 166 AKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKL 201 (238)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHcc
Confidence 9999999999999999999999999 999999875
No 2
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=99.93 E-value=2.5e-25 Score=222.58 Aligned_cols=147 Identities=19% Similarity=0.208 Sum_probs=117.3
Q ss_pred CCChhhhHHHHHHHhhHHHHHHHhC--CCCceEEeec-C-cc-cceecchHHHHhhhcCCCCHHHHHHHHHHHchHHHHH
Q 021101 164 SFFPDYQERVARHEAAHFLLAYLLG--LPILGYSLDI-G-KE-NVNLIDERLEKLIYSGQLDAKELDRLAVVAMAGLAAE 238 (317)
Q Consensus 164 ~ls~~~r~RIA~HEAGHaLvAylLg--~PV~kvsI~p-G-~g-gv~f~~~e~e~~~~~g~~s~~~L~r~~~VlLAGrAAE 238 (317)
.+++++|++++|||+||++++++++ .|++++||.| | ++ |+++..|+.++ ..+|+++|.+.++|+|||||||
T Consensus 266 ~~~~~e~~~~a~~e~G~a~~~~~l~~~~~~~~~~i~prg~~alg~~~~~p~~~~----~~~~~~~l~~~i~~~l~Gr~ae 341 (476)
T 2ce7_A 266 LISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDK----YLVSRNELLDKLTALLGGRAAE 341 (476)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHSTTCCCCCEEECC-----------------C----CSCBHHHHHHHHHHHTHHHHHH
T ss_pred hhhcchhhhhHHHHhhhHHHhhccCCccccceeeeecCcccccceEEEcCcccc----cccCHHHHHHHHHHHHhHHHHH
Confidence 4678899999999999999999997 6999999998 4 22 55544454332 3579999999999999999999
Q ss_pred HhhcCCc-cchhhHHHHHHHHHH----HhCCC-------C-------------------CH-------HHHHHHHHHHHH
Q 021101 239 GLQYDKV-VGQSADLFSLQRFIN----RTKPP-------L-------------------SQ-------DQQQNLTRWAVL 280 (317)
Q Consensus 239 ~lvfG~a-tGa~~Dl~~lt~i~~----~lG~~-------~-------------------s~-------~e~~~l~r~A~~ 280 (317)
+++||+. +|++||++++|+|++ ++||+ + ++ .++++++++||.
T Consensus 342 ~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~v~~~~~~~~~ 421 (476)
T 2ce7_A 342 EVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKKIVTNCYE 421 (476)
T ss_dssp HHHHSSCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC-------------CCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCcccHHHHHHHHHHHHHHHHHhCCCCcCCceeecCCCccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999986 799999999988755 56665 1 11 257789999999
Q ss_pred HHHHHHHHcHHHHHHHHHHHHHhchH--HHHHHHHH
Q 021101 281 FAATLIKNNKAIHEALMAAMSKKATI--LECIEAIE 314 (317)
Q Consensus 281 ~A~~LL~~~r~~leaLaeaLle~esl--~eC~~~Ie 314 (317)
+|+++|++|++.+++||++|+++||| +|+.++++
T Consensus 422 ~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~ 457 (476)
T 2ce7_A 422 RAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS 457 (476)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHTC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHhc
Confidence 99999999999999999999999998 88888775
No 3
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=99.91 E-value=3e-24 Score=215.81 Aligned_cols=147 Identities=22% Similarity=0.223 Sum_probs=123.2
Q ss_pred CCChhhhHHHHHHHhhHHHHHHHhC--CCCceEEeec-Cc-ccceecchHHHHhhhcCCCCHHHHHHHHHHHchHHHHHH
Q 021101 164 SFFPDYQERVARHEAAHFLLAYLLG--LPILGYSLDI-GK-ENVNLIDERLEKLIYSGQLDAKELDRLAVVAMAGLAAEG 239 (317)
Q Consensus 164 ~ls~~~r~RIA~HEAGHaLvAylLg--~PV~kvsI~p-G~-ggv~f~~~e~e~~~~~g~~s~~~L~r~~~VlLAGrAAE~ 239 (317)
.+++++|++++|||+||++++|+++ +||+++||.| |+ .|+++ |+.+ +...+|++++...++++|||||||+
T Consensus 281 ~~~~~e~~~~a~~e~g~av~~~~l~~~~~v~~~~i~pr~~~~g~~~--p~q~---~~~~~t~~~l~~~i~~~lgGr~ae~ 355 (499)
T 2dhr_A 281 VLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMM--PRRE---DMLHWSRKRLLDQIAVALAGRAAEE 355 (499)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHCCSSSCCCCCCEESCCSSCTTCSSH--HHHT---TCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhhhHHHHHHHHHHHhhcCCCCeeeEEEeecCCCcCcccc--cchh---hhhccCHHHHHHHHHHHhhhHhHHH
Confidence 3678899999999999999999987 6999999998 43 25655 4311 2235799998888899999999999
Q ss_pred hhcCCc-cchhhHHHHHHHHHH----HhCCC-------C----------------CH-------HHHHHHHHHHHHHHHH
Q 021101 240 LQYDKV-VGQSADLFSLQRFIN----RTKPP-------L----------------SQ-------DQQQNLTRWAVLFAAT 284 (317)
Q Consensus 240 lvfG~a-tGa~~Dl~~lt~i~~----~lG~~-------~----------------s~-------~e~~~l~r~A~~~A~~ 284 (317)
++||+. +|++||++++|+|++ ++||+ + ++ .++++++++||.+|++
T Consensus 356 ~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~~s~~~~~~i~~~v~~~~~~~~~~~~~ 435 (499)
T 2dhr_A 356 IVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKA 435 (499)
T ss_dssp HHSCSCCBCCCHHHHHHHHHHHHHHTTSCCCSSSCSCCCCCCCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcccHHHHHHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999986 899999999998765 46664 1 21 3678899999999999
Q ss_pred HHHHcHHHHHHHHHHHHHhchH--HHHHHHHHh
Q 021101 285 LIKNNKAIHEALMAAMSKKATI--LECIEAIEN 315 (317)
Q Consensus 285 LL~~~r~~leaLaeaLle~esl--~eC~~~Ie~ 315 (317)
+|++|++.+++||++|+++||| +|+.++++.
T Consensus 436 ~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~ 468 (499)
T 2dhr_A 436 LLLEKREVLERVAETLLERETLTAEEFQRVVEG 468 (499)
T ss_dssp HHHHTHHHHHHHHHHHHHHSEECHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhCeeCHHHHHHHhcc
Confidence 9999999999999999999988 888888864
No 4
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=96.81 E-value=0.00078 Score=61.10 Aligned_cols=56 Identities=18% Similarity=0.059 Sum_probs=41.9
Q ss_pred HHHHHHhhHHHHHHHhCCCCceEEeecCcccceecchHHHHhhhcCCCCHHHHHHHHHHHchHHHHHHhh
Q 021101 172 RVARHEAAHFLLAYLLGLPILGYSLDIGKENVNLIDERLEKLIYSGQLDAKELDRLAVVAMAGLAAEGLQ 241 (317)
Q Consensus 172 RIA~HEAGHaLvAylLg~PV~kvsI~pG~ggv~f~~~e~e~~~~~g~~s~~~L~r~~~VlLAGrAAE~lv 241 (317)
-+..||.||+++|+..|++++++++.|-+|.+.+.. .++ .+.+.|.+||..++-+.
T Consensus 50 ~v~~HElgH~~~A~~~G~~~~~i~l~p~Gg~~~~~~-----------~~~---~~~~~ValAGPl~nl~l 105 (224)
T 3b4r_A 50 SVVLHELGHSYVAKKYGVKIEKILLLPIGGVAMMDK-----------IPK---EGELRIGIAGPLVSFII 105 (224)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCEEECSSSCBCCCCC-----------CCS---SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEEeeeEEEccc-----------CCc---cceeeeeeeHHHHHHHH
Confidence 467899999999999999999999998434444321 111 34457999999998754
No 5
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=74.43 E-value=9.5 Score=28.87 Aligned_cols=51 Identities=16% Similarity=0.144 Sum_probs=34.7
Q ss_pred hHHHHHHHH--HHHhCCCCCHHHHHHHHHH-------HHHHHHHHHHHcHHHHHHHHHHHHH
Q 021101 250 ADLFSLQRF--INRTKPPLSQDQQQNLTRW-------AVLFAATLIKNNKAIHEALMAAMSK 302 (317)
Q Consensus 250 ~Dl~~lt~i--~~~lG~~~s~~e~~~l~r~-------A~~~A~~LL~~~r~~leaLaeaLle 302 (317)
+|+.++..| ++.+||++ ++++.++.. .......+|++|+..++.=-+.|.+
T Consensus 1 ~dl~rL~~I~~lr~lGfsL--~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~ 60 (99)
T 1q08_A 1 SDLQRLKFIRHARQLGFSL--ESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS 60 (99)
T ss_dssp CHHHHHHHHHHHHHTTCCH--HHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCH--HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477777766 56799886 567666653 2245677888888777766666655
No 6
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=70.84 E-value=21 Score=29.45 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=40.4
Q ss_pred hhHHHHHHHH--HHHhCCCCCHHHHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHHh-chHHHHHHHHH
Q 021101 249 SADLFSLQRF--INRTKPPLSQDQQQNLTRW------AVLFAATLIKNNKAIHEALMAAMSKK-ATILECIEAIE 314 (317)
Q Consensus 249 ~~Dl~~lt~i--~~~lG~~~s~~e~~~l~r~------A~~~A~~LL~~~r~~leaLaeaLle~-esl~eC~~~Ie 314 (317)
.+|+.++..| ++.+|+++ ++++.++.. ...+...+|+++++.+++-.+.|.+. +.|+.++...+
T Consensus 43 ~~dl~~l~~I~~lr~~G~sL--~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~ 115 (142)
T 3gp4_A 43 AEDLRWILFTRQMRRAGLSI--EALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYD 115 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCH--HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6688888766 45688776 455555542 34556778888887777766666653 45555544443
No 7
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=66.81 E-value=2.3 Score=35.42 Aligned_cols=15 Identities=40% Similarity=0.206 Sum_probs=12.7
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
+...|+.||-||+|=
T Consensus 107 ~~~~v~~HEiGHaLG 121 (160)
T 2jsd_A 107 NLFTVAAHEFGHALG 121 (160)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhHhhhc
Confidence 567899999999963
No 8
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=64.57 E-value=2.7 Score=35.45 Aligned_cols=15 Identities=40% Similarity=0.344 Sum_probs=12.7
Q ss_pred hhhHHHHHHHhhHHH
Q 021101 168 DYQERVARHEAAHFL 182 (317)
Q Consensus 168 ~~r~RIA~HEAGHaL 182 (317)
.+...|+.||-||+|
T Consensus 113 ~~~~~v~~HEiGHaL 127 (167)
T 2xs4_A 113 IDLITVAAHEIGHLL 127 (167)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhh
Confidence 356789999999986
No 9
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=62.00 E-value=2.6 Score=35.44 Aligned_cols=14 Identities=36% Similarity=0.221 Sum_probs=12.1
Q ss_pred hhHHHHHHHhhHHH
Q 021101 169 YQERVARHEAAHFL 182 (317)
Q Consensus 169 ~r~RIA~HEAGHaL 182 (317)
+...|+.||-||+|
T Consensus 110 ~~~~va~HEiGHaL 123 (159)
T 2ovx_A 110 SLFLVAAHQFGHAL 123 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhh
Confidence 46789999999986
No 10
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=60.86 E-value=3.4 Score=35.11 Aligned_cols=15 Identities=40% Similarity=0.184 Sum_probs=12.5
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
....|+.||-||+|=
T Consensus 112 ~~~~v~~HEiGHaLG 126 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLG 126 (173)
T ss_dssp EHHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHhhc
Confidence 457899999999973
No 11
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=58.55 E-value=3.3 Score=34.94 Aligned_cols=15 Identities=40% Similarity=0.388 Sum_probs=12.7
Q ss_pred hhhHHHHHHHhhHHH
Q 021101 168 DYQERVARHEAAHFL 182 (317)
Q Consensus 168 ~~r~RIA~HEAGHaL 182 (317)
.+...|+.||-||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVL 125 (165)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhHHHHhHhhh
Confidence 456789999999986
No 12
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=58.13 E-value=3.5 Score=34.92 Aligned_cols=14 Identities=50% Similarity=0.558 Sum_probs=12.0
Q ss_pred hhHHHHHHHhhHHH
Q 021101 169 YQERVARHEAAHFL 182 (317)
Q Consensus 169 ~r~RIA~HEAGHaL 182 (317)
....|+.||-||+|
T Consensus 110 ~~~~v~~HEiGHaL 123 (168)
T 1cge_A 110 NLHRVAAHELGHSL 123 (168)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred chhhhhhhHhHhhh
Confidence 45789999999986
No 13
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=55.34 E-value=5 Score=33.82 Aligned_cols=15 Identities=40% Similarity=0.151 Sum_probs=12.5
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
+...|+.||-||+|=
T Consensus 111 ~~~~v~~HE~GHalG 125 (163)
T 1i76_A 111 NLFLVAAHEFGHSLG 125 (163)
T ss_dssp BHHHHHHHHHHHHHT
T ss_pred hhhhhhHHHhhhhhc
Confidence 457899999999863
No 14
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=54.01 E-value=60 Score=26.73 Aligned_cols=65 Identities=22% Similarity=0.345 Sum_probs=43.7
Q ss_pred hhHHHHHHHH--HHHhCCCCCHHHHHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHHh-chHHHHHHHHHh
Q 021101 249 SADLFSLQRF--INRTKPPLSQDQQQNLTRW------AVLFAATLIKNNKAIHEALMAAMSKK-ATILECIEAIEN 315 (317)
Q Consensus 249 ~~Dl~~lt~i--~~~lG~~~s~~e~~~l~r~------A~~~A~~LL~~~r~~leaLaeaLle~-esl~eC~~~Ie~ 315 (317)
.+|+.++..| ++.+|+++ ++++.++.. ...+...+|+++++.+++-.+.|.+. +.|++.+..+++
T Consensus 57 ~~dl~~l~~I~~lr~~G~sL--~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~ 130 (148)
T 3gpv_A 57 EEALKYLEMILCLKNTGMPI--QKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKYED 130 (148)
T ss_dssp HHHHHHHHHHHHHHTTTCCH--HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHcCCCH--HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888776 45678776 566666652 34567788888888888777777664 566666665543
No 15
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=51.14 E-value=6 Score=31.12 Aligned_cols=19 Identities=32% Similarity=0.326 Sum_probs=16.6
Q ss_pred CChhhhHHHHHHHhhHHHH
Q 021101 165 FFPDYQERVARHEAAHFLL 183 (317)
Q Consensus 165 ls~~~r~RIA~HEAGHaLv 183 (317)
++++|.+-|.-||.||..-
T Consensus 78 l~~~El~aVlaHElgH~~~ 96 (107)
T 3cqb_A 78 MTRDEAEAVLAHEVSHIAN 96 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHC
Confidence 3899999999999999853
No 16
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=48.06 E-value=6.1 Score=33.19 Aligned_cols=14 Identities=36% Similarity=0.188 Sum_probs=12.1
Q ss_pred hhHHHHHHHhhHHH
Q 021101 169 YQERVARHEAAHFL 182 (317)
Q Consensus 169 ~r~RIA~HEAGHaL 182 (317)
+...|+.||-||+|
T Consensus 107 ~~~~~~~HE~GH~l 120 (159)
T 1y93_A 107 NLFLTAVHEIGHSL 120 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhh
Confidence 46789999999985
No 17
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=47.58 E-value=25 Score=30.98 Aligned_cols=64 Identities=11% Similarity=0.119 Sum_probs=38.9
Q ss_pred hhHHHHHHHH--HHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHh-chHHHHHHHHH
Q 021101 249 SADLFSLQRF--INRTKPPLSQDQQQNLTRWAVLFAATLIKNNKAIHEALMAAMSKK-ATILECIEAIE 314 (317)
Q Consensus 249 ~~Dl~~lt~i--~~~lG~~~s~~e~~~l~r~A~~~A~~LL~~~r~~leaLaeaLle~-esl~eC~~~Ie 314 (317)
.+|+.++..| ++.+|+++ +++++++........++|+++++.+++-.+.|.+. +.|+..++.++
T Consensus 47 ~~~~~~l~~i~~l~~~g~~l--~~i~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~~~ 113 (278)
T 1r8e_A 47 DSQLIHLDLIKSLKYIGTPL--EEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALEQTISLVKKRMK 113 (278)
T ss_dssp TGGGGHHHHHHHHHHTTCCH--HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCH--HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678877766 46788876 45555543223456677777777776666665553 45555544443
No 18
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=47.35 E-value=7.7 Score=32.68 Aligned_cols=17 Identities=35% Similarity=0.122 Sum_probs=13.7
Q ss_pred hhhhHHHHHHHhhHHHH
Q 021101 167 PDYQERVARHEAAHFLL 183 (317)
Q Consensus 167 ~~~r~RIA~HEAGHaLv 183 (317)
..+...|+.||-||+|-
T Consensus 114 g~~~~~~~~he~gh~lg 130 (169)
T 1rm8_A 114 GNDLFLVAVHELGHALG 130 (169)
T ss_dssp SEEHHHHHHHHHHHHHT
T ss_pred cceeeeehhhhhhhhcC
Confidence 35667899999999863
No 19
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=47.03 E-value=7.8 Score=33.07 Aligned_cols=15 Identities=33% Similarity=0.136 Sum_probs=12.6
Q ss_pred hhhHHHHHHHhhHHH
Q 021101 168 DYQERVARHEAAHFL 182 (317)
Q Consensus 168 ~~r~RIA~HEAGHaL 182 (317)
.+...|+.||-||+|
T Consensus 113 ~~~~~~~~HE~gH~l 127 (174)
T 2y6d_A 113 INFLYAATHELGHSL 127 (174)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeehhhHHhHhhh
Confidence 356789999999986
No 20
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=46.75 E-value=6.4 Score=35.91 Aligned_cols=15 Identities=40% Similarity=0.184 Sum_probs=12.6
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
....|+.||-||+|=
T Consensus 194 ~l~~va~HEiGHaLG 208 (255)
T 1slm_A 194 NLFLVAAHEIGHSLG 208 (255)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred eehhhhHHHHHHHhc
Confidence 457899999999864
No 21
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=46.25 E-value=6.7 Score=33.24 Aligned_cols=14 Identities=29% Similarity=0.152 Sum_probs=11.9
Q ss_pred hhHHHHHHHhhHHH
Q 021101 169 YQERVARHEAAHFL 182 (317)
Q Consensus 169 ~r~RIA~HEAGHaL 182 (317)
....|+.||-||+|
T Consensus 113 ~~~~~~~HE~gH~l 126 (167)
T 3ayu_A 113 SLFLVAAHAFGHAM 126 (167)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cceeehhhhhHHhc
Confidence 45789999999986
No 22
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=42.93 E-value=7.7 Score=35.67 Aligned_cols=17 Identities=41% Similarity=0.614 Sum_probs=13.3
Q ss_pred hhHHHHHHHhhHHHHHH
Q 021101 169 YQERVARHEAAHFLLAY 185 (317)
Q Consensus 169 ~r~RIA~HEAGHaLvAy 185 (317)
..-+++.||.||+|=-|
T Consensus 161 n~g~TltHEvGH~LGL~ 177 (262)
T 2cki_A 161 DKGRTATHEIGHWLNLY 177 (262)
T ss_dssp CSSHHHHHHHHHHTTCC
T ss_pred cccchhhhhhhhhhcce
Confidence 35689999999987433
No 23
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=40.29 E-value=13 Score=31.14 Aligned_cols=14 Identities=43% Similarity=0.624 Sum_probs=11.8
Q ss_pred hhHHHHHHHhhHHH
Q 021101 169 YQERVARHEAAHFL 182 (317)
Q Consensus 169 ~r~RIA~HEAGHaL 182 (317)
...+|+.||-||.|
T Consensus 76 ~~~~v~aHE~GH~L 89 (132)
T 1c7k_A 76 DSTRVTAHETGHVL 89 (132)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CCceEEeeeehhcc
Confidence 35589999999986
No 24
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=40.08 E-value=12 Score=37.09 Aligned_cols=16 Identities=38% Similarity=0.490 Sum_probs=12.8
Q ss_pred hhhHHHHHHHhhHHHH
Q 021101 168 DYQERVARHEAAHFLL 183 (317)
Q Consensus 168 ~~r~RIA~HEAGHaLv 183 (317)
.+...|+.||-||+|=
T Consensus 168 ~~~~~va~HEiGHaLG 183 (471)
T 1sat_A 168 DYGRQTFTHEIGHALG 183 (471)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccceeeeeecccccc
Confidence 3456899999999973
No 25
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=38.73 E-value=13 Score=36.84 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=12.7
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
+...|+.||-||+|=
T Consensus 162 ~~~~va~HEiGHaLG 176 (463)
T 1g9k_A 162 YGRQTLTHEIGHTLG 176 (463)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhhc
Confidence 457899999999974
No 26
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=38.32 E-value=43 Score=30.16 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=15.8
Q ss_pred hhHHHHHHHH--HHHhCCCCCHHHHHHHH
Q 021101 249 SADLFSLQRF--INRTKPPLSQDQQQNLT 275 (317)
Q Consensus 249 ~~Dl~~lt~i--~~~lG~~~s~~e~~~l~ 275 (317)
.+|+.++..| ++.+|+++ .+++.++
T Consensus 44 ~~dl~~L~~I~~lr~~G~sL--~eIk~~l 70 (249)
T 3qao_A 44 EKDVDKLQQILFFKELDFPL--KKIQQIL 70 (249)
T ss_dssp HHHHHHHHHHHHHHHTTCCH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCH--HHHHHHh
Confidence 5688887766 45688775 3444443
No 27
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=37.41 E-value=14 Score=36.77 Aligned_cols=15 Identities=33% Similarity=0.445 Sum_probs=12.5
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
+...|+.||-||+|=
T Consensus 178 ~~~~va~HEIGHaLG 192 (479)
T 1kap_P 178 YGRQTLTHEIGHTLG 192 (479)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred ccceeehhhhhhhhc
Confidence 456899999999874
No 28
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=36.27 E-value=15 Score=36.52 Aligned_cols=16 Identities=31% Similarity=0.449 Sum_probs=12.8
Q ss_pred hhhHHHHHHHhhHHHH
Q 021101 168 DYQERVARHEAAHFLL 183 (317)
Q Consensus 168 ~~r~RIA~HEAGHaLv 183 (317)
.+...|+.||-||+|=
T Consensus 180 ~~~~~va~HEiGHaLG 195 (479)
T 1k7i_A 180 EYGRQTFTHEIGHALG 195 (479)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccccccHHHHHHhhc
Confidence 3446899999999873
No 29
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=32.89 E-value=1.9e+02 Score=23.17 Aligned_cols=51 Identities=12% Similarity=0.018 Sum_probs=27.5
Q ss_pred hhHHHHHHHH--HHHhCCCCCHHHHHHHHHHH------HHHHHHHHHHcHHHHHHHHHHHH
Q 021101 249 SADLFSLQRF--INRTKPPLSQDQQQNLTRWA------VLFAATLIKNNKAIHEALMAAMS 301 (317)
Q Consensus 249 ~~Dl~~lt~i--~~~lG~~~s~~e~~~l~r~A------~~~A~~LL~~~r~~leaLaeaLl 301 (317)
.+|+.++..| ++.+|+++ .+++.++... ..+..++|+++.+.+++-.+.|.
T Consensus 41 ~~dl~~l~~I~~lr~~G~sl--~eI~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~ 99 (135)
T 1q06_A 41 QQHLNELTLLRQARQVGFNL--EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQ 99 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCCH--HHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCH--HHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777665 35678765 3444444321 23445566666655554444443
No 30
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=32.16 E-value=15 Score=31.26 Aligned_cols=16 Identities=38% Similarity=0.083 Sum_probs=12.9
Q ss_pred hhhHHHHHHHhhHHHH
Q 021101 168 DYQERVARHEAAHFLL 183 (317)
Q Consensus 168 ~~r~RIA~HEAGHaLv 183 (317)
.+...|+.||-||+|-
T Consensus 111 ~~l~~v~~hE~Gh~lG 126 (168)
T 830c_A 111 YNLFLVAAHEFGHSLG 126 (168)
T ss_dssp EEHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhcchhc
Confidence 3467899999999864
No 31
>2zhg_A Redox-sensitive transcriptional activator SOXR; oxidative stress, MERR family, activator; HET: DNA; 2.80A {Escherichia coli} PDB: 2zhh_A
Probab=28.01 E-value=87 Score=25.97 Aligned_cols=52 Identities=10% Similarity=-0.057 Sum_probs=29.6
Q ss_pred hhHHHHHHHH--HHHhCCCCCHHHHHHHHHH-------HHHHHHHHHHHcHHHHHHHHHHHHH
Q 021101 249 SADLFSLQRF--INRTKPPLSQDQQQNLTRW-------AVLFAATLIKNNKAIHEALMAAMSK 302 (317)
Q Consensus 249 ~~Dl~~lt~i--~~~lG~~~s~~e~~~l~r~-------A~~~A~~LL~~~r~~leaLaeaLle 302 (317)
.+|+.++..| ++.+|+++ ++++.++.. .......+|+++++.+++=.+.|.+
T Consensus 51 ~~dl~~l~~I~~lr~~G~sl--~eI~~~l~~~~~~~~~~~~~~~~ll~~~~~~l~~qi~~L~~ 111 (154)
T 2zhg_A 51 RDVLRYVAIIKIAQRIGIPL--ATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVA 111 (154)
T ss_dssp TTHHHHHHHHHHHHHHTCCH--HHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCH--HHHHHHHHhccccCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6688888766 45788875 445444431 1233456666666655554444444
No 32
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=27.89 E-value=20 Score=30.98 Aligned_cols=15 Identities=40% Similarity=0.264 Sum_probs=12.2
Q ss_pred hhhHHHHHHHhhHHH
Q 021101 168 DYQERVARHEAAHFL 182 (317)
Q Consensus 168 ~~r~RIA~HEAGHaL 182 (317)
.+...|+.||-||+|
T Consensus 120 ~~l~~v~~hE~Gh~l 134 (181)
T 3ma2_D 120 NDIFLVAVHELGHAL 134 (181)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred ceeeeeehhhccccc
Confidence 456679999999983
No 33
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=26.71 E-value=24 Score=33.54 Aligned_cols=15 Identities=33% Similarity=0.078 Sum_probs=12.6
Q ss_pred hhHHHHHHHhhHHHH
Q 021101 169 YQERVARHEAAHFLL 183 (317)
Q Consensus 169 ~r~RIA~HEAGHaLv 183 (317)
+...|+.||-||+|-
T Consensus 106 ~~~~~~~HE~gH~lG 120 (365)
T 3ba0_A 106 NLFLTAVHEIGHSLG 120 (365)
T ss_dssp ESSHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhhc
Confidence 456899999999985
No 34
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=25.19 E-value=28 Score=31.36 Aligned_cols=23 Identities=13% Similarity=-0.002 Sum_probs=19.2
Q ss_pred cCCChhhhHHHHHHHhhHHHHHH
Q 021101 163 SSFFPDYQERVARHEAAHFLLAY 185 (317)
Q Consensus 163 ~~ls~~~r~RIA~HEAGHaLvAy 185 (317)
+.+.+.+....++||+||.++..
T Consensus 259 ~~~~~~~~~~~~l~~~g~~~~~e 281 (293)
T 3t15_A 259 PTFEQPKMTIEKLLEYGNMLVQE 281 (293)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHH
Confidence 45567788899999999999874
No 35
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=25.06 E-value=26 Score=30.68 Aligned_cols=18 Identities=17% Similarity=0.137 Sum_probs=13.5
Q ss_pred hHHHHHHHhhHHHHHHHh
Q 021101 170 QERVARHEAAHFLLAYLL 187 (317)
Q Consensus 170 r~RIA~HEAGHaLvAylL 187 (317)
+.-++.||-||+|=-+-.
T Consensus 87 ~~g~i~HEl~HalGf~HE 104 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHE 104 (201)
T ss_dssp SHHHHHHHHHHHHTBCCG
T ss_pred ccchhHHHHHHHhcchhh
Confidence 347999999999855443
No 36
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=23.90 E-value=28 Score=30.56 Aligned_cols=17 Identities=35% Similarity=0.383 Sum_probs=13.2
Q ss_pred hHHHHHHHhhHHHHHHH
Q 021101 170 QERVARHEAAHFLLAYL 186 (317)
Q Consensus 170 r~RIA~HEAGHaLvAyl 186 (317)
...++.||-||+|=-+-
T Consensus 93 ~~g~i~HEl~HaLGf~H 109 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYH 109 (199)
T ss_dssp SHHHHHHHHHHHHTCCC
T ss_pred ccchHHHHHHHHhccce
Confidence 35799999999985544
No 37
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=22.05 E-value=26 Score=34.52 Aligned_cols=14 Identities=43% Similarity=0.266 Sum_probs=11.8
Q ss_pred hhHHHHHHHhhHHH
Q 021101 169 YQERVARHEAAHFL 182 (317)
Q Consensus 169 ~r~RIA~HEAGHaL 182 (317)
.-..||.||-||+|
T Consensus 375 ~l~~Va~HE~GHaL 388 (425)
T 1l6j_A 375 SLFLVAAHEFGHAL 388 (425)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhc
Confidence 45679999999986
No 38
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=21.61 E-value=42 Score=33.47 Aligned_cols=22 Identities=23% Similarity=0.134 Sum_probs=18.7
Q ss_pred CChhhhHHHHHHHhhHHHHHHH
Q 021101 165 FFPDYQERVARHEAAHFLLAYL 186 (317)
Q Consensus 165 ls~~~r~RIA~HEAGHaLvAyl 186 (317)
++++|-+-|.-||.||.--.+.
T Consensus 324 l~~~El~aVlaHElgH~~~~~~ 345 (482)
T 4aw6_A 324 CKNEEVLAVLGHELGHWKLGHT 345 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHH
T ss_pred CCHHHHHHHHHHHHHHHHcccH
Confidence 7899999999999999765544
No 39
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=21.40 E-value=56 Score=30.54 Aligned_cols=22 Identities=32% Similarity=0.243 Sum_probs=17.8
Q ss_pred CChhhhHHHHHHHhhHHHHHHH
Q 021101 165 FFPDYQERVARHEAAHFLLAYL 186 (317)
Q Consensus 165 ls~~~r~RIA~HEAGHaLvAyl 186 (317)
.++..++=++-||.||.+...-
T Consensus 91 ~~~~rqrFTLAHELGHllLh~~ 112 (301)
T 3dte_A 91 VRPERQRFTLAHEISHALLLGD 112 (301)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHC
T ss_pred CChhhHHHHHHHHHHHHHhccc
Confidence 3667777799999999998763
No 40
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=21.39 E-value=34 Score=30.85 Aligned_cols=18 Identities=17% Similarity=0.039 Sum_probs=14.3
Q ss_pred HHHHHHHhhHHHHHHHhC
Q 021101 171 ERVARHEAAHFLLAYLLG 188 (317)
Q Consensus 171 ~RIA~HEAGHaLvAylLg 188 (317)
..++.||-||+|=-+-.-
T Consensus 121 ~g~i~HEl~HaLGf~HEh 138 (235)
T 3lq0_A 121 HGTILHALMHAIGFYHEH 138 (235)
T ss_dssp HHHHHHHHHHHHHBCCGG
T ss_pred cchHHHHHHHHhccceee
Confidence 479999999998766544
No 41
>1ufi_A CENP-B, major centromere autoantigen B; dimerization domain, salt bridge, riken structural genomics/proteomics initiative, RSGI; 1.65A {Homo sapiens} SCOP: a.30.4.1
Probab=20.91 E-value=22 Score=25.76 Aligned_cols=15 Identities=60% Similarity=1.039 Sum_probs=11.4
Q ss_pred Chhhhh----cccCcchhh
Q 021101 1 MAYYAA----LTSFPYQSQ 15 (317)
Q Consensus 1 ~~~~~~----~~~~~~~~~ 15 (317)
|||||. |||||....
T Consensus 13 mayfamvkryltsfpiddr 31 (64)
T 1ufi_A 13 MAYFAMVKRYLTSFPIDDR 31 (64)
T ss_dssp HHHHHHHHHHHTTSCCCHH
T ss_pred HHHHHHHHHHHhcCCchHH
Confidence 788874 799997543
No 42
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=20.23 E-value=35 Score=34.40 Aligned_cols=20 Identities=35% Similarity=0.499 Sum_probs=14.6
Q ss_pred HHHHHHhhHHHHHHHh-CCCC
Q 021101 172 RVARHEAAHFLLAYLL-GLPI 191 (317)
Q Consensus 172 RIA~HEAGHaLvAylL-g~PV 191 (317)
.+..||.||++=-... +.|+
T Consensus 343 ~tl~HE~GHa~y~~~~~~~p~ 363 (589)
T 1uze_A 343 VVAHHEMGHIQYFMQYKDLPV 363 (589)
T ss_dssp HHHHHHHHHHHHHHHTTTSCG
T ss_pred HHHHHHHHHHHHHHHHccCCh
Confidence 4899999999984342 3466
Done!