BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021112
(317 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 230 bits (586), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 170/304 (55%), Gaps = 19/304 (6%)
Query: 31 LKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGNN 90
L+ +Y +CP E +V+ V F P IR+ FHDCFV+GCDASV++ S NN
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 91 KAEKDH-PDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
AEKD P+N SL GF+ + AK AVE C TVSCADILA A RD L+G +Y V
Sbjct: 62 TAEKDAIPNNPSL--RGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA--------------GHTVGFSHCSKF 195
GR DG S AS + ++P P FN QL + FA H++G +HCS F
Sbjct: 120 PSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSF 179
Query: 196 ANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVD--PRIAINMDPNTPKTFDNMYFKNLQ 253
NR+YNF+ + +DPTL+ +YA L+ CP N I +++D TP DNMY+ +Q
Sbjct: 180 TNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ 239
Query: 254 QGKGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRDC 313
GL TSDQ L T+ AV A + + + F A+ K+G++ V TG+ G IR +C
Sbjct: 240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNC 299
Query: 314 SAFN 317
S N
Sbjct: 300 SVVN 303
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 171/304 (56%), Gaps = 17/304 (5%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y+ TCPN IVR+ +++ + + IRL FHDCFV GCDAS+++ G+
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
++EK+ N++ A GF+ V K A+E C VSC+D+LALA+ ++L+GGPS++V
Sbjct: 62 IQSEKNAGPNVNSA-RGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPT--------------FNLNQLNSLFAGHTVGFSHCSKF 195
LGR D L++ + + +P P N N L +L HT G + C F
Sbjct: 121 LLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVF 180
Query: 196 ANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQG 255
NR++NFS DPTLN T + LQQ+CP+N N+D +TP FDN YF NLQ
Sbjct: 181 NNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSN 240
Query: 256 KGLFTSDQVLY-TDGRSKPA-VDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRDC 313
GL SDQ L+ T G S A V +AS+ F AF ++ +G ++ TGS+G IR DC
Sbjct: 241 DGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
Query: 314 SAFN 317
N
Sbjct: 301 KKVN 304
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 171/304 (56%), Gaps = 24/304 (7%)
Query: 31 LKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGNN 90
L D+Y +TCP E IVR V++ R+ +RL FHDCFVQGCDASV++
Sbjct: 9 LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 91 KAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKN-TVSCADILALATRDVIALSGGPSYSV 149
E+ P NL+L F V + +E+ C+ VSC+DILALA RD + +SGGP Y V
Sbjct: 69 PGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRV 128
Query: 150 ELGRLDGLS-STASSVSGKLPQPTFNLNQ--------------LNSLFAGHTVGFSHCSK 194
LGR D S ++ V LP P+ N+ L ++ GHT+G +HCS
Sbjct: 129 PLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCSS 188
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCP-KNVDPRIAINMDPNTPKTFDNMYFKNLQ 253
F +R++ P+ DPT++ T+ + L++ CP K D R +D TP FDN Y+ +L
Sbjct: 189 FEDRLF---PRP--DPTISPTFLSRLKRTCPAKGTDRRTV--LDVRTPNVFDNKYYIDLV 241
Query: 254 QGKGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRDC 313
+GLF SDQ L+T+ ++P V+R+A S DF F +I K+G++ V+T G +RR+C
Sbjct: 242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNC 301
Query: 314 SAFN 317
S N
Sbjct: 302 SVRN 305
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 163/306 (53%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++MD TP FDN Y+ NL++
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEE 240
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 300
Query: 312 DCSAFN 317
+C N
Sbjct: 301 NCRVVN 306
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 163/306 (53%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LPQP F L QL F GHT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 300
Query: 312 DCSAFN 317
+C N
Sbjct: 301 NCRVVN 306
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 164/306 (53%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLN---------------SLFAGHTVGFSHCSK 194
LGR D L + + LP P F L QL +L+ GHT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRF 179
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 299
Query: 312 DCSAFN 317
+C N
Sbjct: 300 NCRVVN 305
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRS 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 300
Query: 312 DCSAFN 317
+C N
Sbjct: 301 NCRVVN 306
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 299
Query: 312 DCSAFN 317
+C N
Sbjct: 300 NCRVVN 305
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 299
Query: 312 DCSAFN 317
+C N
Sbjct: 300 NCRVVN 305
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 300
Query: 312 DCSAFN 317
+C N
Sbjct: 301 NCRVVN 306
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 299
Query: 312 DCSAFN 317
+C N
Sbjct: 300 NCRVVN 305
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 300
Query: 312 DCSAFN 317
+C N
Sbjct: 301 NCRVVN 306
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 173/305 (56%), Gaps = 17/305 (5%)
Query: 29 AQLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDG 88
L +YA TCPN +VRT V++ F+ + IRL FHDCFV GCDAS+++ + G
Sbjct: 2 GSLNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSG 61
Query: 89 NNKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYS 148
+ +EK+ N + A GF+ V K A+E C VSC D+LALA++ ++LSGGPS++
Sbjct: 62 SIISEKNAGPNANSA-RGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWT 120
Query: 149 VELGRLDGLSSTASSVSGKLPQPT--------------FNLNQLNSLFAGHTVGFSHCSK 194
V+LGR D L++ + + +P PT N N L +L HT G + C
Sbjct: 121 VDLGRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGV 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
F+NR++NFS + DPTLN T + LQ++CP+ + N+D +TP FDN YF NLQ
Sbjct: 181 FSNRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQS 240
Query: 255 GKGLFTSDQVLY-TDGRSKPA-VDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRD 312
GL SDQ L+ T G + A V +AS+ F AF ++ +G ++ TGS G IR D
Sbjct: 241 NNGLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRLD 300
Query: 313 CSAFN 317
C N
Sbjct: 301 CKKTN 305
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL FHDCFV GCDAS+++ + +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GH+ G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRF 179
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 299
Query: 312 DCSAFN 317
+C N
Sbjct: 300 NCRVVN 305
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 170/306 (55%), Gaps = 25/306 (8%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL D YAK+CPN+ +IVR QV + + IRL FHDCFV GCDAS+++ DG
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLL--DGA 58
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ +EK N++ A GF+ + K AVE C VSCADIL LA RD + LSGGP + V
Sbjct: 59 D-SEKLAIPNINSA-RGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRV 116
Query: 150 ELGRLDGLSSTASSVSGKLPQP--------------TFNLNQLNSLFAGHTVGFSHCSKF 195
LGR DGL + +S + LP P N+ + +L HT G + C+ F
Sbjct: 117 ALGRKDGLVANQNS-ANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVF 175
Query: 196 ANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQG 255
+NR++NF+ D TL + + LQ +CP + I +D +T TFDN YFKNL +G
Sbjct: 176 SNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEG 235
Query: 256 KGLFTSDQVLYTD----GRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL +SDQ+L++ +K V+ ++ S + F F A+ ++G N+ G+ G +R
Sbjct: 236 KGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMG--NISNGASGEVRT 293
Query: 312 DCSAFN 317
+C N
Sbjct: 294 NCRVIN 299
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 161/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + +RL F DCFV GCDAS+++ + +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTS 61
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 62 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 120
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 121 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 180
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 181 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 240
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 241 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 300
Query: 312 DCSAFN 317
+C N
Sbjct: 301 NCRVVN 306
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 19/306 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGN 89
QL +Y +CPNV IVR + + R + + L F DCFV GCDAS+++ + +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTS 60
Query: 90 NKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSV 149
+ EKD N + + GF + + K AVE C TVSCAD+L +A + + L+GGPS+ V
Sbjct: 61 FRTEKDAFGNAN-SARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 119
Query: 150 ELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLF---------------AGHTVGFSHCSK 194
LGR D L + + LP P F L QL F GHT G + C
Sbjct: 120 PLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRF 179
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
+R+YNFS DPTLN TY L+ +CP N + ++ D TP FDN Y+ NL++
Sbjct: 180 IMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEE 239
Query: 255 GKGLFTSDQVLYTDGRSK---PAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
KGL SDQ L++ + P V +A+S F AF+ A+ ++G + TG+ G IR
Sbjct: 240 QKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRL 299
Query: 312 DCSAFN 317
+C N
Sbjct: 300 NCRVVN 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 167/305 (54%), Gaps = 19/305 (6%)
Query: 30 QLKQDYYAKTCPNVEKIVRTQV-EKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDG 88
QL +Y +TCPN+ IV + + F + + +RL FHDCFVQGCD SV++ +
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGA-SLMRLHFHDCFVQGCDGSVLLNNTD 59
Query: 89 NNKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYS 148
++E+D N++ + G D V K AVE C +TVSCADILA+A L GGP +
Sbjct: 60 TIESEQDALPNIN-SIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWP 118
Query: 149 VELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA--------------GHTVGFSHCSK 194
V LGR D L++ + + LP P FNL QL + FA GHT G + CS
Sbjct: 119 VPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCST 178
Query: 195 FANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQ 254
F NR+YNFS DPTLN TY L+ CP+N N+D +TP FDN Y+ NL Q
Sbjct: 179 FINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQ 238
Query: 255 GKGLFTSDQVLYT--DGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRD 312
GL SDQ L++ + P V+ ++S+ F + F ++ K+G + V TG +G IR
Sbjct: 239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQ 298
Query: 313 CSAFN 317
C+ N
Sbjct: 299 CNFVN 303
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 159/306 (51%), Gaps = 32/306 (10%)
Query: 31 LKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGNN 90
L ++YA CPN +++ V + + +RL FHDCFVQGCDASV++ N
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 91 KAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVE 150
EK N + + GF+ + K VE +C VSCADILA+A RD + GG S++V
Sbjct: 62 TGEKTAGPNAN-SIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120
Query: 151 LGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA--------------GHTVGFSHCSKFA 196
LGR D +++ SS + LP P FNL+ L S F+ HT+G + C+ F
Sbjct: 121 LGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFR 180
Query: 197 NRIYNFSPQNPVDPTLNKTYATELQQMCPK-----NVDPRIAINMDPNTPKTFDNMYFKN 251
RIYN ++ +DP TYA LQ CP N+ P D TP FDN Y+ N
Sbjct: 181 TRIYN---ESNIDP----TYAKSLQANCPSVGGDTNLSP-----FDVTTPNKFDNAYYIN 228
Query: 252 LQQGKGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRR 311
L+ KGL SDQ L+ + V ++++ A F T F A+ K+G ++ TG+ G IR
Sbjct: 229 LRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRT 288
Query: 312 DCSAFN 317
+C N
Sbjct: 289 NCRKTN 294
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 22/163 (13%)
Query: 45 KIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDG--NNKAEKDHPDNLSL 102
+ +R +E + P+ IRL +H+ C + DG N+ + + P+ L
Sbjct: 10 RALRADIEDMISEKLELGPSLIRLAWHEAASYDC-----FKKDGSPNSASMRFKPECLYA 64
Query: 103 AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTAS 162
G D KA + +++ +S AD+ LA I GGP+ GR+D +
Sbjct: 65 GNKGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVC 123
Query: 163 SVSGKLPQPT--------------FNLNQLNSLFAGHTVGFSH 191
G+LP + FN + +L HT G +H
Sbjct: 124 GPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETH 166
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 22/163 (13%)
Query: 45 KIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDG--NNKAEKDHPDNLSL 102
+ +R +E + P+ IRL +H+ C + DG N+ + + P+ L
Sbjct: 10 RALRADIEDMISEKLELGPSLIRLAWHEAASYDC-----FKKDGSPNSASMRFKPECLYA 64
Query: 103 AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTAS 162
G D KA + +++ +S AD+ LA I GGP+ GR+D +
Sbjct: 65 GNKGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVC 123
Query: 163 SVSGKLPQPT--------------FNLNQLNSLFAGHTVGFSH 191
G+LP + FN + +L HT G H
Sbjct: 124 GPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECH 166
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 64/163 (39%), Gaps = 22/163 (13%)
Query: 45 KIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDG--NNKAEKDHPDNLSL 102
+ +R +E + P+ IRL +H+ C + DG N+ + + P+ L
Sbjct: 9 RALRADIEDMISEKLELGPSLIRLAWHEAASYDC-----FKKDGSPNSASMRFKPECLYA 63
Query: 103 AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTAS 162
G D KA + +++ +S AD+ LA I GGP+ GR+D +
Sbjct: 64 GNKGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVC 122
Query: 163 SVSGKLPQPT--------------FNLNQLNSLFAGHTVGFSH 191
G+LP + FN + +L HT G H
Sbjct: 123 GPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECH 165
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 105/289 (36%), Gaps = 60/289 (20%)
Query: 45 KIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGNNKA-----EKDHPDN 99
K R +++ + F P +RL +HD + Q G N + E H N
Sbjct: 9 KSAREDIKELLKTKFCH-PIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFDVELKHGAN 67
Query: 100 LSLAGDGFDTVVKAKQAVEQVCK--NTVSCADILALATRDVIALSGGPSYSVELGRLDGL 157
L V A ++ + + V+ AD+ LA+ I +GGP ++ GR+D
Sbjct: 68 AGL--------VNALNLLKPIKDKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVT 119
Query: 158 SSTASSVSGKLPQ---PT-------------FNLNQLNSLFAGHTVGFSHC--SKFANRI 199
G+LP P+ N ++ +L HT+G S S +
Sbjct: 120 EPEQCPEEGRLPDAGPPSPAQHLRDVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPE 179
Query: 200 YNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGKG-- 257
++ P P A L+ FDN YFK++++ +
Sbjct: 180 TKYTKDGPGAPGGQSWTAQWLK----------------------FDNSYFKDIKERRDED 217
Query: 258 --LFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTG 304
+ +D L+ D K +++A+ P F + A KL + K G
Sbjct: 218 LLVLPTDAALFEDPSFKVYAEKYAADPEAFFKDYAEAHAKLSNLGAKFG 266
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 101/291 (34%), Gaps = 75/291 (25%)
Query: 38 KTCPNVEKIVRTQVEK--KFRQTFVT----VPATIRLFFHDC--FVQGCDASVIIQSDGN 89
K+ P V + VEK K + F+ P +RL +H F +G G
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKT-------GG 66
Query: 90 NKAEKDHPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYS 148
HP L+ A +G D V+ + ++ +S AD LA + ++GGP
Sbjct: 67 PFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 149 VELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCS 193
GR D G+LP T + L +F GHT+G +H
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKE 182
Query: 194 KFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQ 253
+ P +P I FDN YF L
Sbjct: 183 RSGFE-------------------------GPWTSNPLI-----------FDNSYFTELL 206
Query: 254 QGK--GLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
G+ GL SD+ L +D +P VD++A+ F + A KL +
Sbjct: 207 SGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 101/292 (34%), Gaps = 75/292 (25%)
Query: 37 AKTCPNVEKIVRTQVEK--KFRQTFVT----VPATIRLFFHDC--FVQGCDASVIIQSDG 88
K+ P V + VEK K + F+ P +RL +H F +G G
Sbjct: 1 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKT-------G 53
Query: 89 NNKAEKDHPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSY 147
HP L+ A +G D V+ + ++ +S AD LA + ++GGP
Sbjct: 54 GPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEV 112
Query: 148 SVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHC 192
GR D G+LP T + L +F GHT+G +H
Sbjct: 113 PFHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 169
Query: 193 SKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNL 252
+ P +P I FDN YF L
Sbjct: 170 ERSGFE-------------------------GPWTSNPLI-----------FDNSYFTEL 193
Query: 253 QQGK--GLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
G+ GL SD+ L +D +P VD++A+ F + A KL +
Sbjct: 194 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 103/274 (37%), Gaps = 39/274 (14%)
Query: 37 AKTCPNVEKIVRTQVEKKFRQT--FVT----VPATIRLFFHDCFVQGCDASVIIQSDGNN 90
K+ P V + +EK R+ F+ P +RL +H D+ ++ G
Sbjct: 1 GKSYPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWHSAGT--FDSKT--KTGGPF 56
Query: 91 KAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVE 150
K + A +G D V+ + +++ VS AD LA + ++GGP
Sbjct: 57 GTIKHQAELAHGANNGLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVPFH 115
Query: 151 LGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDP 210
GR D G+LP T + L +F G +G S I S +
Sbjct: 116 PGRED---KPEPPPEGRLPDATKGSDHLRDVF-GKAMGLSD-----QDIVALSGGH---- 162
Query: 211 TLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK--GLFT--SDQVLY 266
T+ + P +P I FDN YF L G+ GL SD+ L
Sbjct: 163 TIGAAHKERSGFEGPWTSNPLI-----------FDNSYFTELLTGEKDGLLQLPSDKALL 211
Query: 267 TDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
TD +P V+++A+ F + A KL +
Sbjct: 212 TDSVFRPLVEKYAADEDVFFADYAEAHLKLSELG 245
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 102/291 (35%), Gaps = 75/291 (25%)
Query: 38 KTCPNVEKIVRTQVEK--KFRQTFVT----VPATIRLFFHDC--FVQGCDASVIIQSDGN 89
K+ P V + VEK K + F+ P +RL +H F +G G
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKT-------GG 66
Query: 90 NKAEKDHPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYS 148
HP L+ A +G D V+ + ++ +S AD LA + ++GGP
Sbjct: 67 PFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 149 VELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCS 193
GR D G+LP T + L +F GHT+G +H
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAH-- 180
Query: 194 KFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQ 253
K A+ NP+ FDN YF L
Sbjct: 181 KEASGFEGPWTSNPL----------------------------------IFDNSYFTELL 206
Query: 254 QGK--GLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
G+ GL SD+ L +D +P VD++A+ F + A KL +
Sbjct: 207 SGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 101/291 (34%), Gaps = 75/291 (25%)
Query: 38 KTCPNVEKIVRTQVEK--KFRQTFVT----VPATIRLFFHDC--FVQGCDASVIIQSDGN 89
K+ P V + VEK K + F+ P +RL +H F +G G
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKT-------GG 66
Query: 90 NKAEKDHPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYS 148
HP L+ A +G D V+ + ++ +S AD LA + ++GGP
Sbjct: 67 PFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 149 VELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCS 193
GR D G+LP T + L +F GHT+G +H
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKE 182
Query: 194 KFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQ 253
+ P +P I FDN YF L
Sbjct: 183 RSGFE-------------------------GPWTSNPLI-----------FDNSYFTELL 206
Query: 254 QGK--GLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
G+ GL SD+ L +D +P VD++A+ F + A KL +
Sbjct: 207 SGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 101/292 (34%), Gaps = 75/292 (25%)
Query: 37 AKTCPNVEKIVRTQVEK--KFRQTFVT----VPATIRLFFHDC--FVQGCDASVIIQSDG 88
K+ P V + VEK K + F+ P ++L +H F +G G
Sbjct: 1 GKSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLKLAWHSAGTFDKGTKT-------G 53
Query: 89 NNKAEKDHPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSY 147
HP L+ A +G D V+ + ++ +S AD LA + ++GGP
Sbjct: 54 GPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEV 112
Query: 148 SVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHC 192
GR D G+LP T + L +F GHT+G +H
Sbjct: 113 PFHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 169
Query: 193 SKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNL 252
+ P +P I FDN YF L
Sbjct: 170 ERSGFE-------------------------GPWTSNPLI-----------FDNSYFTEL 193
Query: 253 QQGK--GLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
G+ GL SD+ L +D +P VD++A+ F + A KL +
Sbjct: 194 LSGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 100/291 (34%), Gaps = 75/291 (25%)
Query: 38 KTCPNVEKIVRTQVEK--KFRQTFVT----VPATIRLFFHDC--FVQGCDASVIIQSDGN 89
K+ P V + VEK K + F+ P +RL H F +G G
Sbjct: 14 KSYPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKGTKT-------GG 66
Query: 90 NKAEKDHPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYS 148
HP L+ A +G D V+ + ++ +S AD LA + ++GGP
Sbjct: 67 PFGTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVP 125
Query: 149 VELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCS 193
GR D G+LP T + L +F GHT+G +H
Sbjct: 126 FHPGRED---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKE 182
Query: 194 KFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQ 253
+ P +P I FDN YF L
Sbjct: 183 RSGFE-------------------------GPWTSNPLI-----------FDNSYFTELL 206
Query: 254 QGK--GLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
G+ GL SD+ L +D +P VD++A+ F + A KL +
Sbjct: 207 SGEKEGLLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 30/210 (14%)
Query: 96 HPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRL 154
HP L+ A +G D V+ + ++ +S AD LA + ++GGP GR
Sbjct: 73 HPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 155 DGLSSTASSVSGKLPQPTFNLNQLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNK 214
D G+LP T + L +F G +G + I S + T+
Sbjct: 132 D---KPEPPPEGRLPDATKGSDHLRDVF-GKAMGLTD-----QDIVALSGGH----TIGA 178
Query: 215 TYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK--GLFT--SDQVLYTDGR 270
+ P +P I FDN YF L G+ GL SD+ L +D
Sbjct: 179 AHKERSGFEGPWTSNPLI-----------FDNSYFTELLSGEKEGLLQLPSDKALLSDPV 227
Query: 271 SKPAVDRWASSPADFQTAFITAITKLGRVN 300
+P VD++A+ F + A KL +
Sbjct: 228 FRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 79/225 (35%), Gaps = 60/225 (26%)
Query: 96 HPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRL 154
HP L+ A +G D V+ + ++ +S AD LA + ++GGP GR
Sbjct: 73 HPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 155 DGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCSKFANRI 199
D G+LP T + L +F GHT+G +H +
Sbjct: 132 D---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFE- 187
Query: 200 YNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK--G 257
P +P I FDN YF L G+ G
Sbjct: 188 ------------------------GPWTSNPLI-----------FDNSYFTELLSGEKEG 212
Query: 258 LFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
L SD+ L +D +P VD++A+ F + A KL +
Sbjct: 213 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 79/225 (35%), Gaps = 60/225 (26%)
Query: 96 HPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRL 154
HP L+ A +G D V+ + ++ +S AD LA + ++GGP GR
Sbjct: 61 HPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 155 DGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCSKFANRI 199
D G+LP T + L +F GHT+G +H +
Sbjct: 120 D---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFE- 175
Query: 200 YNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK--G 257
P +P I FDN YF L G+ G
Sbjct: 176 ------------------------GPWTSNPLI-----------FDNSYFTELLSGEKEG 200
Query: 258 LFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
L SD+ L +D +P VD++A+ F + A KL +
Sbjct: 201 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 30/210 (14%)
Query: 96 HPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRL 154
HP L+ A +G D V+ + ++ +S AD LA + ++GGP GR
Sbjct: 61 HPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 155 DGLSSTASSVSGKLPQPTFNLNQLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNK 214
D G+LP T + L +F G +G + I S + T+
Sbjct: 120 D---KPEPPPEGRLPDATKGSDHLRDVF-GKAMGLTD-----QDIVALSGGH----TIGA 166
Query: 215 TYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK--GLFT--SDQVLYTDGR 270
+ P +P I FDN YF L G+ GL SD+ L +D
Sbjct: 167 AHKERSGFEGPWTSNPLI-----------FDNSYFTELLSGEKEGLLQLPSDKALLSDPV 215
Query: 271 SKPAVDRWASSPADFQTAFITAITKLGRVN 300
+P VD++A+ F + A KL +
Sbjct: 216 FRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 79/225 (35%), Gaps = 60/225 (26%)
Query: 96 HPDNLSL-AGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRL 154
HP L+ A +G D V+ + ++ +S AD LA + ++GGP GR
Sbjct: 73 HPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 155 DGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCSKFANRI 199
D G+LP T + L +F GHT+G +H +
Sbjct: 132 D---KPEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFE- 187
Query: 200 YNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK--G 257
P +P I FDN YF L G+ G
Sbjct: 188 ------------------------GPWTSNPLI-----------FDNSYFTELLSGEKEG 212
Query: 258 LFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVN 300
L SD+ L +D +P VD++A+ F + A KL +
Sbjct: 213 LLQLPSDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|4G1U|C Chain C, X-Ray Structure Of The Bacterial Heme Transporter Hmuuv
From Yersinia Pestis
pdb|4G1U|D Chain D, X-Ray Structure Of The Bacterial Heme Transporter Hmuuv
From Yersinia Pestis
Length = 266
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 114 KQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRL 154
+QA++QV T D LALA RD LSGG V+L R+
Sbjct: 119 RQALQQVMAQT----DCLALAQRDYRVLSGGEQQRVQLARV 155
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGDA--GFSPVEVVWLLASHSIAAA------DGVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPEVFDSQFFIETQLKGRLF 208
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVSLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP FD+ +F Q LF
Sbjct: 186 FDSTPGVFDSQFFIETQLKGRLF 208
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPEVFDSQFFIETQLKGRLF 208
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPQVFDSQFFIETQLKGRLF 208
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPEVFDSQFFIETQLKGRLF 208
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 101/278 (36%), Gaps = 67/278 (24%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGDA--GFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQ--------------------QGKGLFTSDQVLYTDGRSKPAVD 276
+TP FD+ +F Q QG+ SD +L D ++
Sbjct: 186 FDSTPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLARDPQTACEWQ 245
Query: 277 RWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRDCS 314
+ ++ Q F ++K+ + G D DCS
Sbjct: 246 SFVNNQPKIQNRFAATMSKMALL----GQDKTKLIDCS 279
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGDA--GFSPVEVVYLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP FD+ +F Q LF
Sbjct: 186 FDSTPGVFDSQFFIETQLKGRLF 208
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A + VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAAAK------VDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP FD+ +F Q LF
Sbjct: 186 FDSTPGVFDSQFFIETQLKGRLF 208
>pdb|1HYH|A Chain A, Crystal Structure Of L-2-hydroxyisocaproate
Dehydrogenase From Lactobacillus Confusus At 2.2
Angstroms Resolution-an Example Of Strong Asymmetry
Between Subunits
pdb|1HYH|B Chain B, Crystal Structure Of L-2-hydroxyisocaproate
Dehydrogenase From Lactobacillus Confusus At 2.2
Angstroms Resolution-an Example Of Strong Asymmetry
Between Subunits
pdb|1HYH|C Chain C, Crystal Structure Of L-2-hydroxyisocaproate
Dehydrogenase From Lactobacillus Confusus At 2.2
Angstroms Resolution-an Example Of Strong Asymmetry
Between Subunits
pdb|1HYH|D Chain D, Crystal Structure Of L-2-hydroxyisocaproate
Dehydrogenase From Lactobacillus Confusus At 2.2
Angstroms Resolution-an Example Of Strong Asymmetry
Between Subunits
Length = 309
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 24 PHTILAQLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVI 83
H ++AQ D Y N K+ Q++ F+ + A + +D + DA V+
Sbjct: 17 AHGLIAQGVADDYVFIDANEAKVKADQID--FQDAMANLEAHGNIVIND-WAALADADVV 73
Query: 84 IQSDGNNKAEKDHP 97
I + GN K ++D+P
Sbjct: 74 ISTLGNIKLQQDNP 87
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPGP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPEVFDSQFFIETQLKGRLF 208
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPEP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP FD+ +F Q LF
Sbjct: 186 FDSTPGVFDSQFFIETQLKGRLF 208
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPGP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGD--AGFSPVEVVWLLASHSIAAA------DGVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPEVFDSQFFIETQLKGRLF 208
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 43/203 (21%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P P +
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPGP---FD 143
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINM 236
++S+ A + + FSP V + + A VDP I
Sbjct: 144 SVDSILA----------RMGDA--GFSPVEVVWLLASHSIAAA------DKVDPSIPGTP 185
Query: 237 DPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 186 FDSTPEVFDSQFFIETQLKGRLF 208
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 75/205 (36%), Gaps = 47/205 (22%)
Query: 65 TIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117
++RL FHD G D S+I + E + P N G D +V A++
Sbjct: 41 SLRLTFHDAIGFSPTLGGGGADGSII----AFDTIETNFPANA-----GIDEIVSAQKPF 91
Query: 118 EQVCKNTVSCADILALA-TRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLN 176
V K+ +S D + A V GG LGR D ++++ + +P+
Sbjct: 92 --VAKHNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDHL---VPE------ 140
Query: 177 QLNSLFAGHTVGFSHCSKFANRIYN--FSPQNPVDPTLNKTYATELQQMCPKNVDPRIAI 234
GF R+ + FSP V + + A VDP I
Sbjct: 141 -----------GFDSVDSILARMGDAGFSPVEVVWLLASHSIAAA------DKVDPSIPG 183
Query: 235 NMDPNTPKTFDNMYFKNLQQGKGLF 259
+TP+ FD+ +F Q LF
Sbjct: 184 TPFDSTPEVFDSQFFIETQLKGRLF 208
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 233 AINMDPNTPKTFDNMYFKNLQQGKGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITA 292
A+N + P FD F+ + TSD L D RW P + AF A
Sbjct: 377 AVNGTVDYPDPFDKTKFRKAT----MLTSDLALINDPEYLKISQRWLEHPEELADAFAKA 432
Query: 293 ITKL 296
KL
Sbjct: 433 WFKL 436
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,406,752
Number of Sequences: 62578
Number of extensions: 381771
Number of successful extensions: 910
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 799
Number of HSP's gapped (non-prelim): 65
length of query: 317
length of database: 14,973,337
effective HSP length: 99
effective length of query: 218
effective length of database: 8,778,115
effective search space: 1913629070
effective search space used: 1913629070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)