Query 021112
Match_columns 317
No_of_seqs 180 out of 1328
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 07:42:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021112.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021112hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 7E-106 1E-110 764.0 25.2 301 11-317 5-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1.2E-97 3E-102 705.3 24.2 284 30-316 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.1E-66 2.3E-71 478.3 6.5 214 47-281 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 4.1E-64 8.9E-69 471.8 17.9 218 45-314 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 2.4E-61 5.1E-66 448.0 15.8 217 42-303 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.3E-59 2.8E-64 435.1 15.9 218 33-302 3-248 (250)
7 cd00692 ligninase Ligninase an 100.0 2.8E-58 6.1E-63 439.3 18.6 222 43-317 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 8.5E-57 1.8E-61 415.8 17.3 206 45-302 18-248 (251)
9 cd00314 plant_peroxidase_like 100.0 6.7E-54 1.5E-58 398.5 14.2 210 46-298 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 3.9E-49 8.4E-54 382.5 18.7 245 45-307 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 4.2E-47 9E-52 389.1 19.2 241 45-304 55-405 (716)
12 PRK15061 catalase/hydroperoxid 100.0 2.1E-43 4.5E-48 360.2 19.4 245 45-307 57-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 4E-43 8.7E-48 324.7 11.3 196 56-298 36-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.3E-30 2.8E-35 244.3 13.3 207 49-300 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 99.9 3.3E-26 7.1E-31 235.5 13.5 207 46-301 429-710 (716)
16 PRK15061 catalase/hydroperoxid 99.9 1E-25 2.2E-30 230.8 13.6 207 49-301 442-722 (726)
17 COG0376 KatG Catalase (peroxid 99.9 7E-25 1.5E-29 215.9 16.6 223 60-300 93-416 (730)
18 COG0376 KatG Catalase (peroxid 98.3 2.2E-06 4.7E-11 86.2 8.3 212 50-300 453-725 (730)
19 PF11895 DUF3415: Domain of un 53.4 12 0.00026 29.1 2.4 18 284-301 2-19 (80)
20 PHA03163 hypothetical protein; 28.2 74 0.0016 25.3 3.2 13 29-41 34-46 (92)
21 PF08782 c-SKI_SMAD_bind: c-SK 25.6 29 0.00062 28.0 0.5 14 69-83 4-17 (96)
22 PLN02161 beta-amylase 24.9 1E+02 0.0022 32.1 4.3 33 275-311 235-272 (531)
23 PF06163 DUF977: Bacterial pro 24.7 1.1E+02 0.0023 26.0 3.8 47 246-313 44-99 (127)
24 PF01816 LRV: Leucine rich rep 21.5 54 0.0012 20.0 1.1 23 50-72 2-24 (26)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=6.7e-106 Score=764.00 Aligned_cols=301 Identities=38% Similarity=0.704 Sum_probs=280.5
Q ss_pred HHHHHHHHHHhhcccccccCCCcccccCCCccHHHHHHHHHHHHHHhCCCCcccccceeeccccccCCCcceeecCCCCC
Q 021112 11 IIALSLFLSLCLFPHTILAQLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGNN 90 (317)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDCfv~GCDgSiLl~~~~~~ 90 (317)
|+.+.++|++.+.++++.++|+++||++|||++|+||+++|++++++||+++|++|||+||||||+||||||||+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~-- 82 (324)
T PLN03030 5 IVILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN-- 82 (324)
T ss_pred hhHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc--
Confidence 444555566666666667889999999999999999999999999999999999999999999999999999999643
Q ss_pred ccccCCCCCCCCcccchhHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCC
Q 021112 91 KAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQ 170 (317)
Q Consensus 91 ~~E~~~~~N~~L~~~g~~~Id~iK~~lE~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~ 170 (317)
.||++++|.+| |||++|+.||++||++||++||||||||+||||||+++|||.|+|++||||+++|.+.++. +||+
T Consensus 83 -~Ek~a~~N~~l--~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~ 158 (324)
T PLN03030 83 -TEKTALPNLLL--RGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPG 158 (324)
T ss_pred -ccccCCCCcCc--chHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcC
Confidence 69999999999 9999999999999999999999999999999999999999999999999999999887774 8999
Q ss_pred CCCCHHHHHHhhc--------------cCcccccccccccceeeccCCCC-CCCCCCCHHHHHHHHhhCCCCCCCCcccc
Q 021112 171 PTFNLNQLNSLFA--------------GHTVGFSHCSKFANRIYNFSPQN-PVDPTLNKTYATELQQMCPKNVDPRIAIN 235 (317)
Q Consensus 171 p~~~~~~l~~~F~--------------aHTiG~ahc~~f~~Rl~~~~g~~-~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~ 235 (317)
|+.++++|++.|+ |||||++||.+|.+|||||++++ .+||+||+.|+..|++.||..++++..++
T Consensus 159 p~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~ 238 (324)
T PLN03030 159 FTDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIA 238 (324)
T ss_pred CCCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCcccc
Confidence 9999999999999 99999999999999999999875 58999999999999999995333334678
Q ss_pred CCCCCCcccchHHHHHhhcCccCccchhhhhcCCCcHHHHHHhhcCc----hHHHHHHHHHHHHhhcCCCCCCCCCcccc
Q 021112 236 MDPNTPKTFDNMYFKNLQQGKGLFTSDQVLYTDGRSKPAVDRWASSP----ADFQTAFITAITKLGRVNVKTGSDGNIRR 311 (317)
Q Consensus 236 lD~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~igv~tg~~GeiR~ 311 (317)
+|+.||.+|||+||+||++++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+|||||
T Consensus 239 lD~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk 318 (324)
T PLN03030 239 LDTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRK 318 (324)
T ss_pred CCCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceec
Confidence 99999999999999999999999999999999999999999999875 59999999999999999999999999999
Q ss_pred cCccCC
Q 021112 312 DCSAFN 317 (317)
Q Consensus 312 ~C~~~n 317 (317)
+|+++|
T Consensus 319 ~C~~vN 324 (324)
T PLN03030 319 VCSAIN 324 (324)
T ss_pred cccccC
Confidence 999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.2e-97 Score=705.34 Aligned_cols=284 Identities=50% Similarity=0.890 Sum_probs=274.6
Q ss_pred CCCcccccCCCccHHHHHHHHHHHHHHhCCCCcccccceeeccccccCCCcceeecCCCCCccccCCCCCCCCcccchhH
Q 021112 30 QLKQDYYAKTCPNVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDT 109 (317)
Q Consensus 30 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDCfv~GCDgSiLl~~~~~~~~E~~~~~N~~L~~~g~~~ 109 (317)
||+++||++|||++|+||+++|++.++++++++|++|||+||||||+||||||||+++.++.+|+++++|.+| +||++
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l--~g~~~ 78 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSL--RGFDV 78 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCc--chhHH
Confidence 6999999999999999999999999999999999999999999999999999999988777899999999999 99999
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc------
Q 021112 110 VVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA------ 183 (317)
Q Consensus 110 Id~iK~~lE~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~------ 183 (317)
|+.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|.+..+ +.||+|+.++++|++.|+
T Consensus 79 i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~ 157 (298)
T cd00693 79 IDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTV 157 (298)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999999999999999998887766 789999999999999999
Q ss_pred --------cCcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcC
Q 021112 184 --------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQG 255 (317)
Q Consensus 184 --------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~ 255 (317)
|||||++||.+|.+|||||+|++++||+||+.|+..|++.||+.++++..+++|+.||.+|||+||+||+.+
T Consensus 158 ~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 158 TDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred HHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 999999999999999999999988999999999999999999865556678999999999999999999999
Q ss_pred ccCccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCCCCCCCcccccCccC
Q 021112 256 KGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRDCSAF 316 (317)
Q Consensus 256 ~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~ 316 (317)
+|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+|||||+|+++
T Consensus 238 ~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 9999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.1e-66 Score=478.26 Aligned_cols=214 Identities=47% Similarity=0.859 Sum_probs=197.3
Q ss_pred HHHHHHHHHHhCCCCcccccceeeccccc-cCCCcceeecCCCCCccccCCCCCCCCccc-chhHHHHHHHHHHHhcCCC
Q 021112 47 VRTQVEKKFRQTFVTVPATIRLFFHDCFV-QGCDASVIIQSDGNNKAEKDHPDNLSLAGD-GFDTVVKAKQAVEQVCKNT 124 (317)
Q Consensus 47 V~~~v~~~~~~d~~~a~~llRL~FHDCfv-~GCDgSiLl~~~~~~~~E~~~~~N~~L~~~-g~~~Id~iK~~lE~~Cpg~ 124 (317)
||++|+++++.+++++|+||||+|||||+ +|||||||+. ..|+++++|.+| + |+++|+.||+++|++||++
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl--~~~~~~i~~ik~~~~~~cp~~ 73 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGL--RDGFDVIDPIKAKLEAACPGV 73 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTH--HHHHHHHHHHHHHHCHHSTTT
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCc--ceeeechhhHHhhhcccccCC
Confidence 79999999999999999999999999999 9999999983 379999999999 6 9999999999999999999
Q ss_pred CcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc--------------cCccccc
Q 021112 125 VSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA--------------GHTVGFS 190 (317)
Q Consensus 125 VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~--------------aHTiG~a 190 (317)
|||||||+||||+||+.+|||.|+|++||+|+++|+..++ .+||+|..++++|++.|+ |||||.+
T Consensus 74 VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~ 152 (230)
T PF00141_consen 74 VSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRA 152 (230)
T ss_dssp S-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEE
T ss_pred CCHHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccc
Confidence 9999999999999999999999999999999999998776 679999999999999999 9999999
Q ss_pred ccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcCccCccchhhhhcCCC
Q 021112 191 HCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGKGLFTSDQVLYTDGR 270 (317)
Q Consensus 191 hc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~ 270 (317)
||.+|. ||| + .+||+||+.|+.. .| ..+++. .+++| ||.+|||+||++|++++|+|+|||+|+.|++
T Consensus 153 ~c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~ 219 (230)
T PF00141_consen 153 HCSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPE 219 (230)
T ss_dssp SGGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTT
T ss_pred eecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHH
Confidence 999999 999 4 5799999999987 99 333333 77888 9999999999999999999999999999999
Q ss_pred cHHHHHHhhcC
Q 021112 271 SKPAVDRWASS 281 (317)
Q Consensus 271 t~~~V~~yA~d 281 (317)
|+++|++||+|
T Consensus 220 t~~~V~~yA~d 230 (230)
T PF00141_consen 220 TRPIVERYAQD 230 (230)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhcC
Confidence 99999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=4.1e-64 Score=471.78 Aligned_cols=218 Identities=27% Similarity=0.419 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHhCCCCcccccceeecccc-------ccCCCcceeecCCCCCccccCCCCCCCCcccchhHHHHHHHHH
Q 021112 45 KIVRTQVEKKFRQTFVTVPATIRLFFHDCF-------VQGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117 (317)
Q Consensus 45 ~iV~~~v~~~~~~d~~~a~~llRL~FHDCf-------v~GCDgSiLl~~~~~~~~E~~~~~N~~L~~~g~~~Id~iK~~l 117 (317)
+.+++++ ..+.+||.++|.+|||+||||| ++||||||+++ .|+++++|.+|. +||++|+.||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~-~g~~vid~iK~~~ 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLK-IAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchH-HHHHHHHHHHHHc
Confidence 4455566 4477899999999999999999 99999999984 699999999993 5999999999997
Q ss_pred HHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc--------------
Q 021112 118 EQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA-------------- 183 (317)
Q Consensus 118 E~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~-------------- 183 (317)
| +|||||||+||||+||+++|||.|+|++||+|+++++ ++++||+|+.++++|++.|+
T Consensus 87 ----~-~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsG 158 (289)
T PLN02608 87 ----P-KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSG 158 (289)
T ss_pred ----C-CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcc
Confidence 4 7999999999999999999999999999999999986 34689999999999999998
Q ss_pred cCcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcC--ccC--c
Q 021112 184 GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQG--KGL--F 259 (317)
Q Consensus 184 aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl--L 259 (317)
|||||.+||. |+ +|.| | +..||.+|||+||+||+.+ +|+ |
T Consensus 159 AHTiG~ahc~----r~-g~~g--------------------~-----------~~~Tp~~FDN~Yy~~ll~~~~~gll~L 202 (289)
T PLN02608 159 GHTLGRAHPE----RS-GFDG--------------------P-----------WTKEPLKFDNSYFVELLKGESEGLLKL 202 (289)
T ss_pred cccccccccc----CC-CCCC--------------------C-----------CCCCCCccChHHHHHHHcCCcCCcccc
Confidence 9999999994 54 3321 1 1269999999999999999 798 7
Q ss_pred cchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCCCCCCCcccccCc
Q 021112 260 TSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRDCS 314 (317)
Q Consensus 260 ~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~ 314 (317)
+|||+|+.|++|+++|+.||.||+.|+++|++||+|||+|+|+||.+||+.+.-+
T Consensus 203 ~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 203 PTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred ccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999999999999999999999999999999999999999999987543
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=2.4e-61 Score=447.96 Aligned_cols=217 Identities=24% Similarity=0.346 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHHHHhCCCCcccccceeeccccccCCCcceeecCC---CCCccccCCCCCCCCcccchhHHHHHHHHHH
Q 021112 42 NVEKIVRTQVEKKFRQTFVTVPATIRLFFHDCFVQGCDASVIIQSD---GNNKAEKDHPDNLSLAGDGFDTVVKAKQAVE 118 (317)
Q Consensus 42 ~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDCfv~GCDgSiLl~~~---~~~~~E~~~~~N~~L~~~g~~~Id~iK~~lE 118 (317)
..++||+++|++.++ +|+++|++|||+|||||+ ||+|+++++. ..+.+|+++++|.+|. +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~-~~~~~i~~iK~~~- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLD-IARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchH-HHHHHHHHHHHHc-
Confidence 467899999999999 999999999999999994 8888877543 2335799999999984 7999999999987
Q ss_pred HhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc--------------c
Q 021112 119 QVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA--------------G 184 (317)
Q Consensus 119 ~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~--------------a 184 (317)
| +||||||||||||+||+.+|||.|+|++||+|+++|....++++||.|+.++++|++.|+ |
T Consensus 86 ---~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 5 799999999999999999999999999999999999887788899999999999999998 9
Q ss_pred CcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcCcc-------
Q 021112 185 HTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGKG------- 257 (317)
Q Consensus 185 HTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g------- 257 (317)
||||.+||.. ++|.| + |..||.+|||+||+||+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g---~----------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDG---P----------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCC---C----------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999943 23221 0 125999999999999999999
Q ss_pred -CccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCCC
Q 021112 258 -LFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKT 303 (317)
Q Consensus 258 -lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~t 303 (317)
+|+||++|+.|++|+++|+.||.|+++|+++|++||+||++|||..
T Consensus 206 ~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 206 LMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred eechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999863
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.3e-59 Score=435.08 Aligned_cols=218 Identities=28% Similarity=0.451 Sum_probs=194.5
Q ss_pred cccccCC--CccHHHHHHHHHHHHHHhCCCCcccccceeec-----ccccc--CCCcceeecCCCCCccccCCCCCCCCc
Q 021112 33 QDYYAKT--CPNVEKIVRTQVEKKFRQTFVTVPATIRLFFH-----DCFVQ--GCDASVIIQSDGNNKAEKDHPDNLSLA 103 (317)
Q Consensus 33 ~~fY~~s--CP~~e~iV~~~v~~~~~~d~~~a~~llRL~FH-----DCfv~--GCDgSiLl~~~~~~~~E~~~~~N~~L~ 103 (317)
.+||... |+.+++.+++.+++.+ .+|+++|.+|||+|| ||+++ ||||||.. .+|+++++|.+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHH
Confidence 3566643 8899999999999988 789999999999999 88887 99999954 3699999999983
Q ss_pred ccchhHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc
Q 021112 104 GDGFDTVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA 183 (317)
Q Consensus 104 ~~g~~~Id~iK~~lE~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~ 183 (317)
+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++++ +++||.|+.++++|++.|+
T Consensus 76 -~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~ 146 (250)
T PLN02364 76 -IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFA 146 (250)
T ss_pred -HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHH
Confidence 7999999999998 589999999999999999999999999999999999864 4679999999999999997
Q ss_pred ---------------cCcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHH
Q 021112 184 ---------------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMY 248 (317)
Q Consensus 184 ---------------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Y 248 (317)
|||||++|| +|+ +|.| + + ..||.+|||+|
T Consensus 147 ~~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g--------------------~----------~-~~tp~~fDn~Y 190 (250)
T PLN02364 147 KQMGLSDKDIVALSGAHTLGRCHK----DRS-GFEG--------------------A----------W-TSNPLIFDNSY 190 (250)
T ss_pred HhcCCCHHHheeeecceeeccccC----CCC-CCCC--------------------C----------C-CCCCCccchHH
Confidence 999999999 454 3221 0 1 26999999999
Q ss_pred HHHhhcC--ccCcc--chhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCC
Q 021112 249 FKNLQQG--KGLFT--SDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVK 302 (317)
Q Consensus 249 y~~l~~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~ 302 (317)
|++|+.+ +|+|. |||+|+.|++|+.+|++||.|+++|+++|++||+||++||+-
T Consensus 191 y~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 191 FKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 89875 999999999999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.8e-58 Score=439.31 Aligned_cols=222 Identities=25% Similarity=0.382 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHhCC---CCcccccceeeccccc------------cCCCcceeecCCCCCccccCCCCCCCCcccch
Q 021112 43 VEKIVRTQVEKKFRQTF---VTVPATIRLFFHDCFV------------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGF 107 (317)
Q Consensus 43 ~e~iV~~~v~~~~~~d~---~~a~~llRL~FHDCfv------------~GCDgSiLl~~~~~~~~E~~~~~N~~L~~~g~ 107 (317)
+|..|+++|++.+..+. ..|+.+|||+|||||+ +||||||||+++ .|+++++|.|| +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL--~-- 87 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGL--D-- 87 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCH--H--
Confidence 47889999999998544 4677799999999997 899999999743 69999999999 6
Q ss_pred hHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHHh-hcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc---
Q 021112 108 DTVVKAKQAVEQVCKNTVSCADILALATRDVIA-LSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA--- 183 (317)
Q Consensus 108 ~~Id~iK~~lE~~Cpg~VScADilalAardAV~-~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~--- 183 (317)
++|+.||..+|+.| ||||||||||||+||+ +.|||.|+|++||+|++++.+ +++||.|+.++++|++.|+
T Consensus 88 ~vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~G 161 (328)
T cd00692 88 EIVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAG 161 (328)
T ss_pred HHHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcC
Confidence 99999999999998 9999999999999999 579999999999999999863 4689999999999999998
Q ss_pred -----------cCcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHh
Q 021112 184 -----------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNL 252 (317)
Q Consensus 184 -----------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l 252 (317)
|||||++|. +||+++. +++| .||.+|||+||+|+
T Consensus 162 f~~~E~VaLsGAHTiG~a~~---------------~Dps~~g-------------------~p~D-~TP~~FDn~Yf~~l 206 (328)
T cd00692 162 FSPDELVALLAAHSVAAQDF---------------VDPSIAG-------------------TPFD-STPGVFDTQFFIET 206 (328)
T ss_pred CCHHHHhhhcccccccccCC---------------CCCCCCC-------------------CCCC-CCcchhcHHHHHHH
Confidence 999999982 3676641 3577 59999999999998
Q ss_pred h-cCcc-------------------CccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 021112 253 Q-QGKG-------------------LFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKTGSDGNIRRD 312 (317)
Q Consensus 253 ~-~~~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~ 312 (317)
+ .+++ +|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||. +....+
T Consensus 207 l~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~d 282 (328)
T cd00692 207 LLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTD 282 (328)
T ss_pred HHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhcc
Confidence 7 5555 499999999999999999999999999999999999999999986 447779
Q ss_pred CccCC
Q 021112 313 CSAFN 317 (317)
Q Consensus 313 C~~~n 317 (317)
|+.|+
T Consensus 283 cs~v~ 287 (328)
T cd00692 283 CSDVI 287 (328)
T ss_pred CcccC
Confidence 99875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=8.5e-57 Score=415.79 Aligned_cols=206 Identities=27% Similarity=0.422 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHhCCCCcccccceeeccccc-------cCCCcceeecCCCCCccccCCCCCCCCcccchhHHHHHHHHH
Q 021112 45 KIVRTQVEKKFRQTFVTVPATIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117 (317)
Q Consensus 45 ~iV~~~v~~~~~~d~~~a~~llRL~FHDCfv-------~GCDgSiLl~~~~~~~~E~~~~~N~~L~~~g~~~Id~iK~~l 117 (317)
+-++..+.+.+ .+...+|.+|||.||||.+ |||||||.+. .|+++++|.||. .++++|+.||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~-~~~~~i~~iK~~~ 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLD-IAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChH-HHHHHHHHHHHHc
Confidence 34566777766 4679999999999999965 8999999863 699999999992 3999999999998
Q ss_pred HHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc--------------
Q 021112 118 EQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA-------------- 183 (317)
Q Consensus 118 E~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~-------------- 183 (317)
++||||||||||||+||+++|||.|+|++||+|++++. ++++||+|+.++++|++.|+
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG 161 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG 161 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence 47999999999999999999999999999999999885 35689999999999999998
Q ss_pred cCcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcC--ccC--c
Q 021112 184 GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQG--KGL--F 259 (317)
Q Consensus 184 aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl--L 259 (317)
|||||++||. | ++|.| .+| .||.+|||+||++|+.+ +|+ |
T Consensus 162 aHTiG~ah~~----r-~g~~g------------------------------~~d-~tp~~FDN~Yy~~ll~~~~~gll~L 205 (251)
T PLN02879 162 GHTLGRCHKE----R-SGFEG------------------------------AWT-PNPLIFDNSYFKEILSGEKEGLLQL 205 (251)
T ss_pred cccccccccc----c-ccCCC------------------------------CCC-CCccceeHHHHHHHHcCCcCCCccc
Confidence 9999999994 3 23221 123 69999999999999999 898 6
Q ss_pred cchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCC
Q 021112 260 TSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVK 302 (317)
Q Consensus 260 ~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~ 302 (317)
+||++|+.||+|+++|++||.||++||++|++||+||++||+.
T Consensus 206 ~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 206 PTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 7999999999999999999999999999999999999999974
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=6.7e-54 Score=398.52 Aligned_cols=210 Identities=32% Similarity=0.460 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHhCCCCcccccceeecccccc--------CCCcceeecCCCCCccccCCCCCCCCcccchhHHHHHHHHH
Q 021112 46 IVRTQVEKKFRQTFVTVPATIRLFFHDCFVQ--------GCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAV 117 (317)
Q Consensus 46 iV~~~v~~~~~~d~~~a~~llRL~FHDCfv~--------GCDgSiLl~~~~~~~~E~~~~~N~~L~~~g~~~Id~iK~~l 117 (317)
.|+..|++.+.+++.+++++|||+|||||+. ||||||+++ +|+++++|.+|. +++++|+.||.++
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~-~~~~~l~~ik~~~ 74 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLD-KALRALEPIKSAY 74 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHH-HHHHHHHHHHHHc
Confidence 5888999999999999999999999999996 999999997 399999999862 8999999999999
Q ss_pred HHhcCCCCcHHHHHHHhhhhHHhhc--CCCceeeeccccCCCCCc--cCCCCCCCCCCCCCHHHHHHhhc----------
Q 021112 118 EQVCKNTVSCADILALATRDVIALS--GGPSYSVELGRLDGLSST--ASSVSGKLPQPTFNLNQLNSLFA---------- 183 (317)
Q Consensus 118 E~~Cpg~VScADilalAardAV~~~--GGP~~~v~~GRrD~~~s~--~~~~~~~lP~p~~~~~~l~~~F~---------- 183 (317)
|. |++|||||||++|+++||+.+ |||.|+|++||+|++++. ...+.+.+|.|+.+++++++.|.
T Consensus 75 ~~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~V 152 (255)
T cd00314 75 DG--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELV 152 (255)
T ss_pred CC--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHH
Confidence 98 999999999999999999999 999999999999999774 34456778888899999999998
Q ss_pred -----cCcc-cccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcCc-
Q 021112 184 -----GHTV-GFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGK- 256 (317)
Q Consensus 184 -----aHTi-G~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~- 256 (317)
+||| |++||..+..|+ | .+|+.||.+|||+||++|+.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~ 198 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNW 198 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCc
Confidence 9999 999998877664 2 2356899999999999999998
Q ss_pred ---------------cCccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhc
Q 021112 257 ---------------GLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGR 298 (317)
Q Consensus 257 ---------------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 298 (317)
++|+||++|+.|++|+.+|+.||.|+++|+++|++||+||++
T Consensus 199 ~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 199 EWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999984
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=3.9e-49 Score=382.45 Aligned_cols=245 Identities=23% Similarity=0.300 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHhC--------CCCcccccceeeccccc-------cCCC-cceeecCCCCCccccCCCCCCCCcccchh
Q 021112 45 KIVRTQVEKKFRQT--------FVTVPATIRLFFHDCFV-------QGCD-ASVIIQSDGNNKAEKDHPDNLSLAGDGFD 108 (317)
Q Consensus 45 ~iV~~~v~~~~~~d--------~~~a~~llRL~FHDCfv-------~GCD-gSiLl~~~~~~~~E~~~~~N~~L~~~g~~ 108 (317)
+.|++.|++.+... ...+|-+|||+|||+.+ +|++ |+|.+. +|++++.|.+|. ++..
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~-~a~~ 117 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLD-KARR 117 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHH-HHHH
Confidence 67899999988764 37999999999999987 7997 788775 699999999994 7899
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccC--------------------------
Q 021112 109 TVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTAS-------------------------- 162 (317)
Q Consensus 109 ~Id~iK~~lE~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~-------------------------- 162 (317)
+++.||+++ |..||+||+|+||+..||+.+|||.|++..||.|...+...
T Consensus 118 ~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~ 193 (409)
T cd00649 118 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLA 193 (409)
T ss_pred HHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchh
Confidence 999999988 55699999999999999999999999999999999754320
Q ss_pred ---------CCCC--CCCCCCCCHHHHHHhhc---------------cCcccccccccccceeeccCCCCCCCCCCCHHH
Q 021112 163 ---------SVSG--KLPQPTFNLNQLNSLFA---------------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTY 216 (317)
Q Consensus 163 ---------~~~~--~lP~p~~~~~~l~~~F~---------------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~ 216 (317)
.+++ .||+|..++++|++.|. |||||++||..|.+||. +||.+++.|
T Consensus 194 a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~ 266 (409)
T cd00649 194 AVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIE 266 (409)
T ss_pred hhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-------CCCCcCHHH
Confidence 0123 69999999999999998 99999999999999982 699999999
Q ss_pred HHHHH--hhCCCCCC-CCccccCC---CCCCcccchHHHHHhhc------------------------------------
Q 021112 217 ATELQ--QMCPKNVD-PRIAINMD---PNTPKTFDNMYFKNLQQ------------------------------------ 254 (317)
Q Consensus 217 a~~L~--~~Cp~~~~-~~~~~~lD---~~Tp~~FDN~Yy~~l~~------------------------------------ 254 (317)
++.|+ .+||.+.. ++....+| +.||.+|||+||++|++
T Consensus 267 ~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~ 346 (409)
T cd00649 267 QQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKH 346 (409)
T ss_pred HHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCcccccccc
Confidence 99995 89996432 23355677 58999999999999998
Q ss_pred CccCccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHh--hcCCCCCCCCC
Q 021112 255 GKGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKL--GRVNVKTGSDG 307 (317)
Q Consensus 255 ~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~igv~tg~~G 307 (317)
+++||+||++|+.|++|+++|++||.|+++||++|++||+|| +.+|+++---|
T Consensus 347 ~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 347 APMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred CcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 569999999999999999999999999999999999999999 69999986555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=4.2e-47 Score=389.11 Aligned_cols=241 Identities=22% Similarity=0.244 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHhC--------CCCcccccceeeccccc-------cCC-CcceeecCCCCCccccCCCCCCCCcccchh
Q 021112 45 KIVRTQVEKKFRQT--------FVTVPATIRLFFHDCFV-------QGC-DASVIIQSDGNNKAEKDHPDNLSLAGDGFD 108 (317)
Q Consensus 45 ~iV~~~v~~~~~~d--------~~~a~~llRL~FHDCfv-------~GC-DgSiLl~~~~~~~~E~~~~~N~~L~~~g~~ 108 (317)
+.|+++|++.+... ...+|-+|||+||++.+ ||| .|+|.+. +|++++.|.+|. +++.
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ld-ka~~ 127 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLD-KARR 127 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHH-HHHH
Confidence 56899999988864 37999999999999987 788 4888765 699999999993 7888
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCc----------------------------
Q 021112 109 TVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSST---------------------------- 160 (317)
Q Consensus 109 ~Id~iK~~lE~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~---------------------------- 160 (317)
+++.||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 128 lL~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~ 203 (716)
T TIGR00198 128 LLWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAA 203 (716)
T ss_pred HHHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchh
Confidence 9998888 47999999999999999999999999999999999994321
Q ss_pred ---------cCCCCCCCCCCCCCHHHHHHhhc---------------cCcccccccccccceeeccCCCCCCCCCCCHHH
Q 021112 161 ---------ASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTY 216 (317)
Q Consensus 161 ---------~~~~~~~lP~p~~~~~~l~~~F~---------------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~ 216 (317)
+.. ...+|+|..++++|++.|. +||||++||.+|.+|| ++||++++.|
T Consensus 204 ~~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~ 275 (716)
T TIGR00198 204 TEMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIE 275 (716)
T ss_pred hhccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-------CCCCCcCHHH
Confidence 011 1269999999999999998 9999999999999998 2799999999
Q ss_pred HHHHHhhCCCCC---CCCccccCC---CCCCcccchHHHHHhhcC----------------------------------c
Q 021112 217 ATELQQMCPKNV---DPRIAINMD---PNTPKTFDNMYFKNLQQG----------------------------------K 256 (317)
Q Consensus 217 a~~L~~~Cp~~~---~~~~~~~lD---~~Tp~~FDN~Yy~~l~~~----------------------------------~ 256 (317)
++.|+.+||... .+...+.+| +.||.+|||+||+||+.. +
T Consensus 276 ~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~ 355 (716)
T TIGR00198 276 EQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNP 355 (716)
T ss_pred HHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccccccccccccccc
Confidence 999999998532 222245677 679999999999999974 7
Q ss_pred cCccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhh--cCCCCCC
Q 021112 257 GLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLG--RVNVKTG 304 (317)
Q Consensus 257 glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~igv~tg 304 (317)
++|+||++|..||+|+++|+.||.|+++|+++|++||+||+ .+|++.-
T Consensus 356 ~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 356 IMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred CccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 89999999999999999999999999999999999999999 5666543
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.1e-43 Score=360.16 Aligned_cols=245 Identities=23% Similarity=0.292 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHhC--------CCCcccccceeeccccc-------cCCC-cceeecCCCCCccccCCCCCCCCcccchh
Q 021112 45 KIVRTQVEKKFRQT--------FVTVPATIRLFFHDCFV-------QGCD-ASVIIQSDGNNKAEKDHPDNLSLAGDGFD 108 (317)
Q Consensus 45 ~iV~~~v~~~~~~d--------~~~a~~llRL~FHDCfv-------~GCD-gSiLl~~~~~~~~E~~~~~N~~L~~~g~~ 108 (317)
+.|+++|++.+... ...+|-+|||+||++.+ +||+ |+|.+. +|++++.|.+|. ++..
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~-ka~~ 129 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLD-KARR 129 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHH-HHHH
Confidence 56899999988764 37999999999999987 7996 788764 699999999994 7999
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHhhhhHHhhcCCCceeeeccccCCCCCccC--------------------------
Q 021112 109 TVVKAKQAVEQVCKNTVSCADILALATRDVIALSGGPSYSVELGRLDGLSSTAS-------------------------- 162 (317)
Q Consensus 109 ~Id~iK~~lE~~Cpg~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~-------------------------- 162 (317)
+++.||+++ |..||+||+|+||+..||+.+|||.|++..||.|...+...
T Consensus 130 ~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 999999998 66799999999999999999999999999999998653320
Q ss_pred ------------CCCCCCCCCCCCHHHHHHhhc---------------cCcccccccccccceeeccCCCCCCCCCCCHH
Q 021112 163 ------------SVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKT 215 (317)
Q Consensus 163 ------------~~~~~lP~p~~~~~~l~~~F~---------------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~ 215 (317)
+....+|+|..++.+|++.|+ |||||++||..|.+|| ++||.+++.
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~~ 278 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAPI 278 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc-------CCCCCcCHH
Confidence 011238999999999999998 9999999999999998 379999999
Q ss_pred HHHHHH--hhCCCCC-CCCccccCC---CCCCcccchHHHHHhhcC----------------------------------
Q 021112 216 YATELQ--QMCPKNV-DPRIAINMD---PNTPKTFDNMYFKNLQQG---------------------------------- 255 (317)
Q Consensus 216 ~a~~L~--~~Cp~~~-~~~~~~~lD---~~Tp~~FDN~Yy~~l~~~---------------------------------- 255 (317)
+++.|. +.||.+. .++.+..+| +.||.+|||+||++|+.+
T Consensus 279 ~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~ 358 (726)
T PRK15061 279 EEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKK 358 (726)
T ss_pred HHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccc
Confidence 999985 8999642 233355677 689999999999999984
Q ss_pred --ccCccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHh--hcCCCCCCCCC
Q 021112 256 --KGLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKL--GRVNVKTGSDG 307 (317)
Q Consensus 256 --~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~igv~tg~~G 307 (317)
++||+||++|..||+++++|++||.|+++|+++|++||+|| ..+|+++---|
T Consensus 359 ~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 359 HAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred cCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 68999999999999999999999999999999999999999 45777654333
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=4e-43 Score=324.73 Aligned_cols=196 Identities=24% Similarity=0.364 Sum_probs=161.3
Q ss_pred HhCCCCcccccceeecccc-------ccCCCcceeecCCCCCccccC-CCCCCCCcccchhHHHHHHHHHHHhcCCCCcH
Q 021112 56 RQTFVTVPATIRLFFHDCF-------VQGCDASVIIQSDGNNKAEKD-HPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSC 127 (317)
Q Consensus 56 ~~d~~~a~~llRL~FHDCf-------v~GCDgSiLl~~~~~~~~E~~-~~~N~~L~~~g~~~Id~iK~~lE~~Cpg~VSc 127 (317)
..+++++++||||+||||| ++||||||+++.. .+|+. .+.|.+| ++|++|+.+ +|||
T Consensus 36 ~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l--~~~~~i~~~----------~VSc 100 (264)
T cd08201 36 GPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTL--NFFVNFYSP----------RSSM 100 (264)
T ss_pred CCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhcc--ccceeeccC----------ccCH
Confidence 3688999999999999999 8999999999742 36777 5566778 888888654 5999
Q ss_pred HHHHHHhhhhHHhhcCCCceeeeccccCCCCCccCCCCCCCCCCCCCHHHHHHhhc---------------cCccccccc
Q 021112 128 ADILALATRDVIALSGGPSYSVELGRLDGLSSTASSVSGKLPQPTFNLNQLNSLFA---------------GHTVGFSHC 192 (317)
Q Consensus 128 ADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~---------------aHTiG~ahc 192 (317)
|||||||||+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+ |||||++||
T Consensus 101 ADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc 176 (264)
T cd08201 101 ADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVHS 176 (264)
T ss_pred HHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeeccc
Confidence 99999999999999999999999999999988753 39999999999999997 799999999
Q ss_pred ccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCcccchHHHHHhhcCcc----------Cccch
Q 021112 193 SKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPKTFDNMYFKNLQQGKG----------LFTSD 262 (317)
Q Consensus 193 ~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g----------lL~SD 262 (317)
..|.+++- | +...+...++| .||.+|||+||.+++.+.. -+.||
T Consensus 177 ~~f~~~~~---------~----------------g~~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd 230 (264)
T cd08201 177 EDFPEIVP---------P----------------GSVPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSD 230 (264)
T ss_pred ccchhhcC---------C----------------ccccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCccch
Confidence 98877641 1 00001123566 6999999999999998742 36899
Q ss_pred hhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhc
Q 021112 263 QVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGR 298 (317)
Q Consensus 263 ~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 298 (317)
..++....-.. ++..| ++..|.+..+..+.||.+
T Consensus 231 ~r~f~~d~n~t-~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 231 LRIFSSDGNVT-MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred hhheecCccHH-HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 99998665433 46677 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=99.97 E-value=1.3e-30 Score=244.32 Aligned_cols=207 Identities=17% Similarity=0.199 Sum_probs=162.6
Q ss_pred HHHHHHHHhCCCCcccccceeeccccc-------cCCCcc-eeecCCCCCccccCCCCCCC--CcccchhHHHHHHHHHH
Q 021112 49 TQVEKKFRQTFVTVPATIRLFFHDCFV-------QGCDAS-VIIQSDGNNKAEKDHPDNLS--LAGDGFDTVVKAKQAVE 118 (317)
Q Consensus 49 ~~v~~~~~~d~~~a~~llRL~FHDCfv-------~GCDgS-iLl~~~~~~~~E~~~~~N~~--L~~~g~~~Id~iK~~lE 118 (317)
+.+++.+....-.++.|+||+||++.+ ||++|+ |.|. +|++++.|.+ |. +.+.+++.||.+..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~-~~~~~Le~ik~~~~ 89 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELA-KVLAVLEGIQKEFN 89 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHH-HHHHHHHHHHHHhc
Confidence 567777777778899999999999987 799999 6554 6999999998 84 68999999999983
Q ss_pred H-hcCC-CCcHHHHHHHhhhhHHhhcCC-----CceeeeccccCCCCCccCCC--CCCCCCCC------------CCHHH
Q 021112 119 Q-VCKN-TVSCADILALATRDVIALSGG-----PSYSVELGRLDGLSSTASSV--SGKLPQPT------------FNLNQ 177 (317)
Q Consensus 119 ~-~Cpg-~VScADilalAardAV~~~GG-----P~~~v~~GRrD~~~s~~~~~--~~~lP~p~------------~~~~~ 177 (317)
. .-++ .||.||+|+||+..||+.+|| |.+++.+||.|.+.+..... ...+|.+. ...+.
T Consensus 90 ~~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 90 ESQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred ccccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHH
Confidence 1 1111 599999999999999999999 99999999999986532110 11234332 13467
Q ss_pred HHHhhc--------------cC-cccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCCc
Q 021112 178 LNSLFA--------------GH-TVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTPK 242 (317)
Q Consensus 178 l~~~F~--------------aH-TiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp~ 242 (317)
|+..|. || ++|..|-.++ .| | .+.+|.
T Consensus 170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~-------~G--------------------~-----------wT~~p~ 211 (297)
T cd08200 170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK-------HG--------------------V-----------FTDRPG 211 (297)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCC-------CC--------------------C-----------CcCCCC
Confidence 788887 76 6887663210 01 1 346899
Q ss_pred ccchHHHHHhhcC--------------------cc-----CccchhhhhcCCCcHHHHHHhhcC--chHHHHHHHHHHHH
Q 021112 243 TFDNMYFKNLQQG--------------------KG-----LFTSDQVLYTDGRSKPAVDRWASS--PADFQTAFITAITK 295 (317)
Q Consensus 243 ~FDN~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~K 295 (317)
+|||.||+||+.- .| .+.+|.+|..|++.|++|+.||.| +++||++|++||.|
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~K 291 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTK 291 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 9999999999941 01 267899999999999999999998 99999999999999
Q ss_pred hhcCC
Q 021112 296 LGRVN 300 (317)
Q Consensus 296 m~~ig 300 (317)
|.++.
T Consensus 292 lmeld 296 (297)
T cd08200 292 VMNLD 296 (297)
T ss_pred HHhcC
Confidence 99874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=99.93 E-value=3.3e-26 Score=235.50 Aligned_cols=207 Identities=17% Similarity=0.229 Sum_probs=158.2
Q ss_pred HHHHHHHHH---HHhCCCCcccccceeeccccc-------cCCCcc-eeecCCCCCccccCCCCC--CCCcccchhHHHH
Q 021112 46 IVRTQVEKK---FRQTFVTVPATIRLFFHDCFV-------QGCDAS-VIIQSDGNNKAEKDHPDN--LSLAGDGFDTVVK 112 (317)
Q Consensus 46 iV~~~v~~~---~~~d~~~a~~llRL~FHDCfv-------~GCDgS-iLl~~~~~~~~E~~~~~N--~~L~~~g~~~Id~ 112 (317)
+|+++|.+. +....-..+.|+|++||++.+ ||++|+ |.|. +|++++.| .+|. +.+.+++.
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~-~vl~~Le~ 501 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLA-KVLAVLEK 501 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHH-HHHHHHHH
Confidence 445555553 455667789999999999987 899999 6664 69999999 7884 78999999
Q ss_pred HHHHHHHhcCCCCcHHHHHHHhhhhHHhhc---CCC--ceeeeccccCCCCCccCCCCCCCC-----CC----------C
Q 021112 113 AKQAVEQVCKNTVSCADILALATRDVIALS---GGP--SYSVELGRLDGLSSTASSVSGKLP-----QP----------T 172 (317)
Q Consensus 113 iK~~lE~~Cpg~VScADilalAardAV~~~---GGP--~~~v~~GRrD~~~s~~~~~~~~lP-----~p----------~ 172 (317)
||++... +.||.||+|+||+..||+.+ ||| .+++.+||.|.+.... +++...| +. .
T Consensus 502 Ik~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~ 577 (716)
T TIGR00198 502 IQAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAV 577 (716)
T ss_pred HHHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccC
Confidence 9998831 26999999999999999998 998 5788899999986532 2222222 11 1
Q ss_pred CCHHHHHHhhc--------------c-CcccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCC
Q 021112 173 FNLNQLNSLFA--------------G-HTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMD 237 (317)
Q Consensus 173 ~~~~~l~~~F~--------------a-HTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD 237 (317)
.....|+..|. + |++|..|-.++ .| | .
T Consensus 578 ~~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~-------~G--------------------~-----------~ 619 (716)
T TIGR00198 578 TPEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK-------HG--------------------V-----------F 619 (716)
T ss_pred CHHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC-------CC--------------------C-----------C
Confidence 12345667765 4 59998874211 01 1 2
Q ss_pred CCCCcccchHHHHHhhcC--------------------cc---Cc--cchhhhhcCCCcHHHHHHhhcCc--hHHHHHHH
Q 021112 238 PNTPKTFDNMYFKNLQQG--------------------KG---LF--TSDQVLYTDGRSKPAVDRWASSP--ADFQTAFI 290 (317)
Q Consensus 238 ~~Tp~~FDN~Yy~~l~~~--------------------~g---lL--~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa 290 (317)
+.+|.+|||.||+||+.- .| ++ .+|.+|..|++.|++|+.||.|+ ++|++||+
T Consensus 620 T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~ 699 (716)
T TIGR00198 620 TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFV 699 (716)
T ss_pred cCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHH
Confidence 468999999999999861 02 22 67999999999999999999997 89999999
Q ss_pred HHHHHhhcCCC
Q 021112 291 TAITKLGRVNV 301 (317)
Q Consensus 291 ~Am~Km~~igv 301 (317)
+||.|+.+++-
T Consensus 700 ~Aw~Klm~ldr 710 (716)
T TIGR00198 700 AAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHhCCC
Confidence 99999999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=99.93 E-value=1e-25 Score=230.79 Aligned_cols=207 Identities=18% Similarity=0.222 Sum_probs=162.0
Q ss_pred HHHHHHHHhCCCCcccccceeeccccc-------cCCCcc-eeecCCCCCccccCCCCCC--CCcccchhHHHHHHHHHH
Q 021112 49 TQVEKKFRQTFVTVPATIRLFFHDCFV-------QGCDAS-VIIQSDGNNKAEKDHPDNL--SLAGDGFDTVVKAKQAVE 118 (317)
Q Consensus 49 ~~v~~~~~~d~~~a~~llRL~FHDCfv-------~GCDgS-iLl~~~~~~~~E~~~~~N~--~L~~~g~~~Id~iK~~lE 118 (317)
..+++.+....-..+.|+|++||++.+ ||++|+ |.|. +|++++.|. +|. +.+++++.||++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~-~vl~~LE~Ik~~f~ 514 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLA-KVLAVLEGIQAEFN 514 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHH-HHHHHHHHHHHHHh
Confidence 456677777777899999999999987 899999 7765 699999998 884 68999999999986
Q ss_pred HhcC--CCCcHHHHHHHhhhhHHhhc---CC--CceeeeccccCCCCCccCCCC---CCCCCCC------------CCHH
Q 021112 119 QVCK--NTVSCADILALATRDVIALS---GG--PSYSVELGRLDGLSSTASSVS---GKLPQPT------------FNLN 176 (317)
Q Consensus 119 ~~Cp--g~VScADilalAardAV~~~---GG--P~~~v~~GRrD~~~s~~~~~~---~~lP~p~------------~~~~ 176 (317)
..-. ..||.||+|+||+..||+.+ || |.+++.+||.|.+.... +++ ..+|... ...+
T Consensus 515 ~~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~ 593 (726)
T PRK15061 515 AAQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEE 593 (726)
T ss_pred hccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHH
Confidence 4321 24999999999999999998 68 99999999999976432 222 1356532 1236
Q ss_pred HHHHhhc--------------cC-cccccccccccceeeccCCCCCCCCCCCHHHHHHHHhhCCCCCCCCccccCCCCCC
Q 021112 177 QLNSLFA--------------GH-TVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATELQQMCPKNVDPRIAINMDPNTP 241 (317)
Q Consensus 177 ~l~~~F~--------------aH-TiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L~~~Cp~~~~~~~~~~lD~~Tp 241 (317)
.|+..|. +| ++|..|-.++ .| | .+.+|
T Consensus 594 ~L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~-------~G--------------------~-----------~T~~p 635 (726)
T PRK15061 594 LLVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK-------HG--------------------V-----------FTDRP 635 (726)
T ss_pred HHHHHHHhCCCChHHHhheecchhhcccCCCCCC-------CC--------------------C-----------CcCCC
Confidence 6778876 65 6777663210 00 1 24689
Q ss_pred cccchHHHHHhhcC----------c----------c---C--ccchhhhhcCCCcHHHHHHhhcC--chHHHHHHHHHHH
Q 021112 242 KTFDNMYFKNLQQG----------K----------G---L--FTSDQVLYTDGRSKPAVDRWASS--PADFQTAFITAIT 294 (317)
Q Consensus 242 ~~FDN~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~ 294 (317)
.+|||.||+||+.- . | + +.+|.+|..|++.|++|+.||.| +++|++||++||.
T Consensus 636 ~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~ 715 (726)
T PRK15061 636 GVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWT 715 (726)
T ss_pred CccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 99999999999941 1 1 1 46899999999999999999999 9999999999999
Q ss_pred HhhcCCC
Q 021112 295 KLGRVNV 301 (317)
Q Consensus 295 Km~~igv 301 (317)
|+.+++-
T Consensus 716 Kvmeldr 722 (726)
T PRK15061 716 KVMNLDR 722 (726)
T ss_pred HHHhCCC
Confidence 9999873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.93 E-value=7e-25 Score=215.90 Aligned_cols=223 Identities=22% Similarity=0.278 Sum_probs=178.3
Q ss_pred CCcccccceeeccccc-------cCCCcceeecCCCCCccccCCCCCCCCcccchhHHHHHHHHHHHhcCCCCcHHHHHH
Q 021112 60 VTVPATIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLSLAGDGFDTVVKAKQAVEQVCKNTVSCADILA 132 (317)
Q Consensus 60 ~~a~~llRL~FHDCfv-------~GCDgSiLl~~~~~~~~E~~~~~N~~L~~~g~~~Id~iK~~lE~~Cpg~VScADila 132 (317)
..+|-+|||+||-..+ +|..+.- -+|.++.++|.|.+| ++++.++..||.++ +..+|+||++.
T Consensus 93 hYGplfIRmAWHsAGTYRi~DGRGGa~~G~-----qRFaPlnSWPDN~nL-DKarRLLWPIKkKY----G~kiSWaDL~i 162 (730)
T COG0376 93 HYGPLFIRMAWHSAGTYRIGDGRGGAGGGQ-----QRFAPLNSWPDNANL-DKARRLLWPIKKKY----GRKISWADLII 162 (730)
T ss_pred ccccceeeeeecccCceecccCCCCCCCCc-----eecccccCCCcccch-HHHHHHhhhHhHhh----cccccHhHhhh
Confidence 5899999999999987 3443322 235679999999999 48999999999998 77899999999
Q ss_pred HhhhhHHhhcCCCceeeeccccCCCCCcc--------------------------------------CCCCCCCCCCCCC
Q 021112 133 LATRDVIALSGGPSYSVELGRLDGLSSTA--------------------------------------SSVSGKLPQPTFN 174 (317)
Q Consensus 133 lAardAV~~~GGP~~~v~~GRrD~~~s~~--------------------------------------~~~~~~lP~p~~~ 174 (317)
||+..|++.+|++.+.+..||.|-..+.. .. .+..|+|-.+
T Consensus 163 LaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIYVNPEG-png~PDpl~a 241 (730)
T COG0376 163 LAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIYVNPEG-PNGNPDPLAA 241 (730)
T ss_pred hhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEEeCCCC-CCCCCChhhh
Confidence 99999999999999999999999877654 22 3468999999
Q ss_pred HHHHHHhhc---------------cCcccccccccccceeeccCCCCCCCCCCCHHHHHHH--HhhCCCCCCCCc-c---
Q 021112 175 LNQLNSLFA---------------GHTVGFSHCSKFANRIYNFSPQNPVDPTLNKTYATEL--QQMCPKNVDPRI-A--- 233 (317)
Q Consensus 175 ~~~l~~~F~---------------aHTiG~ahc~~f~~Rl~~~~g~~~~dp~ld~~~a~~L--~~~Cp~~~~~~~-~--- 233 (317)
+.+++..|+ +||+|.+|...-.+.+ +++|.--+--.+.| ...|..+.+.++ +
T Consensus 242 A~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~qGlGW~~~~g~G~G~dtitsGl 314 (730)
T COG0376 242 ARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQGLGWANTYGSGKGPDTITSGL 314 (730)
T ss_pred HHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc-------CCCccccchhhhccccccccCCCcCcccccccc
Confidence 999999998 8999999975533222 46776544444444 344443222211 1
Q ss_pred ccCCCCCCcccchHHHHHhhcC-----------------------------------ccCccchhhhhcCCCcHHHHHHh
Q 021112 234 INMDPNTPKTFDNMYFKNLQQG-----------------------------------KGLFTSDQVLYTDGRSKPAVDRW 278 (317)
Q Consensus 234 ~~lD~~Tp~~FDN~Yy~~l~~~-----------------------------------~glL~SD~~L~~d~~t~~~V~~y 278 (317)
..-+..||++|||+||.+|+.. ..||++|.+|.-||..+++.++|
T Consensus 315 E~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~DP~Y~kIs~rf 394 (730)
T COG0376 315 EGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRFDPEYEKISRRF 394 (730)
T ss_pred cccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhcChHHHHHHHHH
Confidence 2235679999999999999852 25799999999999999999999
Q ss_pred hcCchHHHHHHHHHHHHhhcCC
Q 021112 279 ASSPADFQTAFITAITKLGRVN 300 (317)
Q Consensus 279 A~d~~~F~~~Fa~Am~Km~~ig 300 (317)
..|++.|.+.|++||.||..-+
T Consensus 395 ~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 395 LEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred HhCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999998643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=98.29 E-value=2.2e-06 Score=86.19 Aligned_cols=212 Identities=20% Similarity=0.269 Sum_probs=125.9
Q ss_pred HHHHHHHhCCCCcccccceeeccccc-------cCCCcceeecCCCCCccccCCCCCCC--CcccchhHHHHHHHHHHHh
Q 021112 50 QVEKKFRQTFVTVPATIRLFFHDCFV-------QGCDASVIIQSDGNNKAEKDHPDNLS--LAGDGFDTVVKAKQAVEQV 120 (317)
Q Consensus 50 ~v~~~~~~d~~~a~~llRL~FHDCfv-------~GCDgSiLl~~~~~~~~E~~~~~N~~--L~~~g~~~Id~iK~~lE~~ 120 (317)
.++..+....-....|+--+|--.-+ +|.+|.-+.- .+.++++.|.. |+ +-+.+++.|.+...
T Consensus 453 ~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirL-----aPqkdWevN~P~~l~-kvl~~le~iq~~fn-- 524 (730)
T COG0376 453 ALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRL-----APQKDWEVNQPAELA-KVLAVLEKIQKEFN-- 524 (730)
T ss_pred HHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEee-----cccccCCCCCHHHHH-HHHHHHHHHHHHhc--
Confidence 34455555555566666666665544 6777765532 25789999953 42 45777888887774
Q ss_pred cCCCCcHHHHHHHhhhhHHhhc---CCCcee--eeccccCCCCCccCCCCCC-CCCCCCCHHHHHHhhccCccccccccc
Q 021112 121 CKNTVSCADILALATRDVIALS---GGPSYS--VELGRLDGLSSTASSVSGK-LPQPTFNLNQLNSLFAGHTVGFSHCSK 194 (317)
Q Consensus 121 Cpg~VScADilalAardAV~~~---GGP~~~--v~~GRrD~~~s~~~~~~~~-lP~p~~~~~~l~~~F~aHTiG~ahc~~ 194 (317)
-.||.||+|+|++..||+.+ .|-.+. +..||.|....-. +++.- .-.|. .+..+
T Consensus 525 --kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqt-Dv~sf~~LeP~--aDGfR--------------- 584 (730)
T COG0376 525 --KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQT-DVESFAVLEPI--ADGFR--------------- 584 (730)
T ss_pred --CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhc-chhhhhccccc--chhhh---------------
Confidence 46999999999999999864 777665 5679999865422 11100 00010 11111
Q ss_pred ccceeeccCCCCCCCCCCCHHHH-----HHHHhhCCCC--------------CCCCccccCCCCCCcccchHHHHHhhcC
Q 021112 195 FANRIYNFSPQNPVDPTLNKTYA-----TELQQMCPKN--------------VDPRIAINMDPNTPKTFDNMYFKNLQQG 255 (317)
Q Consensus 195 f~~Rl~~~~g~~~~dp~ld~~~a-----~~L~~~Cp~~--------------~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~ 255 (317)
||-+ .+-.+.|++. +.|.-.-|.- ++....+. +..|..+.|.||.||+.=
T Consensus 585 ------Ny~~---~~~~~~pe~~LvDkAqlL~LtapemtVLiGGlRvLg~n~g~s~~GVf--T~~pg~LtndFFvnLlDM 653 (730)
T COG0376 585 ------NYVK---KDYVLTPEELLVDKAQLLTLTAPEMTVLIGGLRVLGANYGGSKHGVF--TDRPGVLTNDFFVNLLDM 653 (730)
T ss_pred ------hhcc---CCCcCCHHHHHHHHHHHhccCCccceEEEcceEeeccCCCCCcccee--ccCcccccchhhhhhhhc
Confidence 2211 1112223221 1222222310 00011111 236889999999999841
Q ss_pred ----------c----------cC-----ccchhhhhcCCCcHHHHHHhhcC--chHHHHHHHHHHHHhhcCC
Q 021112 256 ----------K----------GL-----FTSDQVLYTDGRSKPAVDRWASS--PADFQTAFITAITKLGRVN 300 (317)
Q Consensus 256 ----------~----------gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~ig 300 (317)
+ |- -..|..+-.++..|.+.+-||.| ++.|.+||..||.|..++.
T Consensus 654 ~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 654 GTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred cceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 1 21 12455555667789999999875 7899999999999988775
No 19
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=53.35 E-value=12 Score=29.14 Aligned_cols=18 Identities=33% Similarity=0.475 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 021112 284 DFQTAFITAITKLGRVNV 301 (317)
Q Consensus 284 ~F~~~Fa~Am~Km~~igv 301 (317)
...++|..||.||+.||-
T Consensus 2 ~m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 356799999999999874
No 20
>PHA03163 hypothetical protein; Provisional
Probab=28.22 E-value=74 Score=25.31 Aligned_cols=13 Identities=8% Similarity=0.087 Sum_probs=10.0
Q ss_pred cCCCcccccCCCc
Q 021112 29 AQLKQDYYAKTCP 41 (317)
Q Consensus 29 ~~L~~~fY~~sCP 41 (317)
++-..+||+.+|-
T Consensus 34 p~~~~~FYs~~C~ 46 (92)
T PHA03163 34 PHDFDMFHQYDCN 46 (92)
T ss_pred CCCCcccccCCCC
Confidence 3456789999994
No 21
>PF08782 c-SKI_SMAD_bind: c-SKI Smad4 binding domain; InterPro: IPR014890 c-SKI is an oncoprotein that inhibits TGF-beta signalling through interaction with Smad proteins []. This protein binds to Smad4 [].; GO: 0005634 nucleus; PDB: 1MR1_C.
Probab=25.60 E-value=29 Score=28.01 Aligned_cols=14 Identities=50% Similarity=1.331 Sum_probs=9.4
Q ss_pred eeccccccCCCccee
Q 021112 69 FFHDCFVQGCDASVI 83 (317)
Q Consensus 69 ~FHDCfv~GCDgSiL 83 (317)
.+|+|| +||.|+..
T Consensus 4 V~HeC~-g~c~G~f~ 17 (96)
T PF08782_consen 4 VYHECF-GGCRGSFI 17 (96)
T ss_dssp EEE-ST-T-EEEEE-
T ss_pred eEEeec-CccceEec
Confidence 479997 79999987
No 22
>PLN02161 beta-amylase
Probab=24.89 E-value=1e+02 Score=32.12 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=23.4
Q ss_pred HHHhhcCchHHHHHHHHHHHHhh-----cCCCCCCCCCcccc
Q 021112 275 VDRWASSPADFQTAFITAITKLG-----RVNVKTGSDGNIRR 311 (317)
Q Consensus 275 V~~yA~d~~~F~~~Fa~Am~Km~-----~igv~tg~~GeiR~ 311 (317)
++.|. .|++.|..+|.-+- +|.|=-|+.||.|=
T Consensus 235 lq~Y~----Dfm~SFr~~F~~~~~~~I~eI~VGlGP~GELRY 272 (531)
T PLN02161 235 VQCYE----DFMLSFSTKFEPYIGNVIEEISIGLGPSGELRY 272 (531)
T ss_pred HHHHH----HHHHHHHHHHHHHhcCceEEEEeccccCccccC
Confidence 45565 47777877777753 55666689999984
No 23
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=24.71 E-value=1.1e+02 Score=26.00 Aligned_cols=47 Identities=32% Similarity=0.432 Sum_probs=27.9
Q ss_pred hHHHHHhhc-------Cc-cCccchhhhhcCCCcHHHHHHhhcCchHHHHHHHHHHHHhhcCCCCC-CCCCcccccC
Q 021112 246 NMYFKNLQQ-------GK-GLFTSDQVLYTDGRSKPAVDRWASSPADFQTAFITAITKLGRVNVKT-GSDGNIRRDC 313 (317)
Q Consensus 246 N~Yy~~l~~-------~~-glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~t-g~~GeiR~~C 313 (317)
..|+++|.+ |+ |+|.|.++- .+|-.|=.||..-+..- =++||||+-=
T Consensus 44 k~~lreLVa~G~l~~~G~~GvF~seqA~---------------------~dw~~~~~~~~~~~~~~~~pdg~~rry~ 99 (127)
T PF06163_consen 44 KRYLRELVARGDLYRHGRSGVFPSEQAR---------------------KDWDKARKKLVDPDLIWKLPDGEIRRYD 99 (127)
T ss_pred HHHHHHHHHcCCeEeCCCccccccHHHH---------------------HHHHHhHHhhccchhhhhCCCccccccc
Confidence 578888875 34 777766642 34555555654333222 2689999843
No 24
>PF01816 LRV: Leucine rich repeat variant; InterPro: IPR004830 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This signature describes a leucine-rich repeat variant (LRV), which has a novel repetitive structural motif consisting of alternating alpha- and 3(10)-helices arranged in a right-handed superhelix, with the absence of the beta-sheets present in other LRRs [].; PDB: 1LRV_A.
Probab=21.49 E-value=54 Score=20.02 Aligned_cols=23 Identities=17% Similarity=0.234 Sum_probs=16.0
Q ss_pred HHHHHHHhCCCCcccccceeecc
Q 021112 50 QVEKKFRQTFVTVPATIRLFFHD 72 (317)
Q Consensus 50 ~v~~~~~~d~~~a~~llRL~FHD 72 (317)
.|+.++..+|.+.+.+|+..-||
T Consensus 2 ~VR~avA~~P~~P~~~L~~La~D 24 (26)
T PF01816_consen 2 EVRAAVARRPNLPPEVLEQLAHD 24 (26)
T ss_dssp HHHHHHHHH--S-GGGGGGGTT-
T ss_pred HHHHHHHHccCCCHHHHHHhccC
Confidence 57888999999999998877776
Done!