BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>021113
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL
DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP
RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI
ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS
LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT
GFLSEQNIKVGKPNDFI

High Scoring Gene Products

Symbol, full name Information P value
GEK1
GEKO1 		protein from Arabidopsis thaliana 2.1e-123

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021113
        (317 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044279 - symbol:GEK1 "GEKO1" species:3702 "Ar...  1213  2.1e-123  1


>TAIR|locus:2044279 [details] [associations]
            symbol:GEK1 "GEKO1" species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016788 "hydrolase
            activity, acting on ester bonds" evidence=IEA] [GO:0009636
            "response to toxic substance" evidence=IGI] [GO:0051499
            "D-aminoacyl-tRNA deacylase activity" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0009644 "response to high light
            intensity" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] InterPro:IPR007508 InterPro:IPR018033
            Pfam:PF04414 PIRSF:PIRSF016210 GO:GO:0005829 GO:GO:0005634
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009636
            EMBL:AC006836 GO:GO:0051499 EMBL:AB091252 EMBL:BT022079
            EMBL:AK228782 IPI:IPI00545763 PIR:D84452 RefSeq:NP_178474.2
            UniGene:At.41372 PaxDb:Q9ZPQ3 PRIDE:Q9ZPQ3
            EnsemblPlants:AT2G03800.1 GeneID:814906 KEGG:ath:AT2G03800
            TAIR:At2g03800 eggNOG:COG1650 HOGENOM:HOG000242735
            InParanoid:Q9ZPQ3 OMA:DWKGSKG PhylomeDB:Q9ZPQ3
            ProtClustDB:CLSN2681139 Genevestigator:Q9ZPQ3 GermOnline:AT2G03800
            Uniprot:Q9ZPQ3
        Length = 317

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 225/316 (71%), Positives = 257/316 (81%)

Query:     1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
             MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct:     1 MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query:    61 DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
             D RW+EATGEVV EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA P+ 
Sbjct:    61 DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPST 120

Query:   121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVX 180
             RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKRQDAAQV 
Sbjct:   121 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVM 180

Query:   181 XXXXXXXXXXXXXXXXXXXXRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
                                  E+ K KVLLGIGGGHYAPRHMDI LKDD+WV HLLSGYS
Sbjct:   181 ALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYS 240

Query:   241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
             LPMEDP+Q+K       IGG W+++IKAA+EAT+++FPGGEILAHLDHKSFKGWQK AIT
Sbjct:   241 LPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKAIT 300

Query:   301 GFLSEQNIKVGKPNDF 316
              FL+E++I VGKPNDF
Sbjct:   301 EFLAEESINVGKPNDF 316


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      317       296   0.00093  115 3  11 22  0.43    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  224 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.60u 0.22s 24.82t   Elapsed:  00:00:01
  Total cpu time:  24.60u 0.22s 24.82t   Elapsed:  00:00:01
  Start:  Sat May 11 02:03:24 2013   End:  Sat May 11 02:03:25 2013

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