Query         021113
Match_columns 317
No_of_seqs    123 out of 148
Neff          5.1 
Searched_HMMs 29240
Date          Mon Mar 25 12:55:51 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021113hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2gfq_A UPF0204 protein PH0006; 100.0 1.2E-91 4.2E-96  665.7  18.4  274    1-314    22-297 (298)
  2 1yqe_A Hypothetical UPF0204 pr 100.0 1.3E-90 4.3E-95  654.8  19.6  268    1-315     4-274 (282)
  3 1x49_A Interferon-induced, dou  56.3      43  0.0015   26.0   7.4   74  112-189     3-82  (97)
  4 1jwq_A N-acetylmuramoyl-L-alan  53.8     8.5 0.00029   33.1   3.1   33  156-188   135-172 (179)
  5 3ha2_A NADPH-quinone reductase  42.0      40  0.0014   28.6   5.6   59    1-79      1-59  (177)
  6 3ne8_A N-acetylmuramoyl-L-alan  37.2      19 0.00065   32.3   2.8   33  156-188   183-220 (234)
  7 1rli_A Trp repressor binding p  33.3      69  0.0024   25.9   5.5   25    1-25      4-30  (184)
  8 2yv2_A Succinyl-COA synthetase  32.5      66  0.0023   29.5   5.8   47  261-314    83-129 (297)
  9 3lcm_A SMU.1420, putative oxid  31.5      95  0.0032   26.2   6.3   25    1-25      1-27  (196)
 10 1xov_A PLY protein, plypsa; al  30.5      29 0.00099   32.8   3.0   33  156-188   146-183 (326)
 11 3kz5_E Protein SOPB; partition  29.1      46  0.0016   23.6   3.1   32  275-306    16-47  (52)
 12 3vsj_A 2-amino-5-chlorophenol   28.8 2.3E+02   0.008   25.1   8.7  116   71-218    42-181 (271)
 13 2yv1_A Succinyl-COA ligase [AD  27.4      68  0.0023   29.3   4.9   47  261-314    82-128 (294)
 14 3qay_A Endolysin; amidase A/B   26.9      24 0.00083   30.1   1.6   32  156-188   138-174 (180)
 15 1b4u_B LIGA, LIGB, protocatech  24.8 3.3E+02   0.011   24.8   9.2  129   71-220    50-199 (302)
 16 3cf4_G Acetyl-COA decarboxylas  23.9 1.1E+02  0.0037   25.4   5.2   31  282-312    37-67  (170)
 17 2nu8_A Succinyl-COA ligase [AD  23.1 1.2E+02  0.0043   27.4   5.8   47  261-314    76-122 (288)
 18 3adg_A F21M12.9 protein; HYL1,  21.9 1.7E+02  0.0058   20.8   5.3   58  126-188     6-71  (73)
 19 3b6i_A Flavoprotein WRBA; flav  21.1 1.1E+02  0.0039   24.9   4.7   25    1-25      2-26  (198)
 20 1oi7_A Succinyl-COA synthetase  21.0      95  0.0033   28.3   4.6   47  261-314    76-122 (288)
 21 1f4p_A Flavodoxin; electron tr  20.3      78  0.0027   24.7   3.4   25    1-25      1-25  (147)

No 1  
>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, Pro structure initiative, midwest center for structural genomic unknown function; 1.75A {Pyrococcus horikoshii} SCOP: c.56.7.1
Probab=100.00  E-value=1.2e-91  Score=665.69  Aligned_cols=274  Identities=28%  Similarity=0.406  Sum_probs=251.4

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEec
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSK   80 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSR   80 (317)
                      ||++||+|++||||+||+++|+++++|++.+..+++.++|+.++|+|+++|+++||+|+||++|++++|+.+|+|||+||
T Consensus        22 mm~~iV~S~~DpAs~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~D~ld~~~~~~~g~~~d~iIflSR  101 (298)
T 2gfq_A           22 HMKVIMTTKVDKASMNIMNKLIENFGFKETEYVFEGNPVYKRGDVLILTTNDEMIYYDYLDREIENQLGFKPEIIAFASR  101 (298)
T ss_dssp             CCEEEEEETTCHHHHHHHHHHHHHSCCEEEEEEETTEEEEEETTEEEEEESSCSTTCTTHHHHHHHHHSCCCSEEEEEEE
T ss_pred             cEEEEEEeCCCchhHHHHHHHHHhcCccccccccCCcceeecCcEEEEEecCceeeccchhhhhhhhccCCCcEEEEEec
Confidence            89999999999999999999999999999877667899999999999999999999999999999989999999999999


Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCC
Q 021113           81 HTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKP  158 (317)
Q Consensus        81 H~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~P  158 (317)
                      |+|++++|+||||+||||     ++|.|||+|+++|+|+|++ ++|||.|++++     .++|+|+||||||||| +++|
T Consensus       102 H~s~~~~p~LTvH~tGN~-----g~a~~GG~p~~la~a~P~~~~~lLr~l~~~~-----~~~fevt~EATHHGPt~l~~P  171 (298)
T 2gfq_A          102 HSSKQKLPALTTHVTGNW-----GKAMYGGKDESFAVAIPSAMKLSLLKMSELN-----DLGWTVCYEATHHGPTELEVP  171 (298)
T ss_dssp             EECSSCCCEEEEECCEES-----SCCSSSSCTTEECBBCHHHHHHHHHHHHHHC-----CSCCEEEECCSCSSCCCCCSB
T ss_pred             cccCCCCceEEEeCCCCC-----CccccCCCCCccccCCHHHHHHHHHHHHHhc-----CCCCEEEEeccccCCCCCCCC
Confidence            999999999999999997     5999999999999999996 68888888872     2489999999999999 8999


Q ss_pred             ceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCC
Q 021113          159 TMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG  238 (317)
Q Consensus       159 s~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~k  238 (317)
                      ++||||||||+||+|++|+++||++|+++++        +|.....+++++||||||||+||||+++|++++|||||+||
T Consensus       172 s~FVEIGSte~eW~d~~A~~~vA~av~~~l~--------~~~~~~~~~~~~iG~GGgHYapr~t~~~l~~~~~~GHi~pk  243 (298)
T 2gfq_A          172 SFFIEIGSSEEEWINDRAGEIIAETIIYVLD--------NYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPK  243 (298)
T ss_dssp             EEEEEEEESHHHHTCHHHHHHHHHHHHHHHH--------HHHHHTTTCEEEEEECSCTTCHHHHHHHHHSSEEEEEEECG
T ss_pred             cEEEEeCCCHHHhCChHHHHHHHHHHHHHhc--------cchhcccCCCEEEEeCCCCcChHHHHHHhhCCeeEEeeccc
Confidence            9999999999999999999999999999974        33321124679999999999999999999999999999999


Q ss_pred             CccCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          239 YSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       239 y~l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      |+|++.                  ++++++|++++   ++ |...|||||||+|+++|++|+++|+++||+|+|.+
T Consensus       244 y~l~~~------------------~e~l~~ai~~~---~~-~~~~~~iD~K~~k~~~R~~i~~~l~~lgi~v~k~~  297 (298)
T 2gfq_A          244 YAQPVS------------------RDVMIKALNRF---GE-KVEAIYVDWKGSRGETRQLAKSLAQELGLEFIKDG  297 (298)
T ss_dssp             GGCCCC------------------HHHHHHHHTCB---SS-CCCEEEEESTTSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             cchhcC------------------HHHHHHHHHhh---cC-CCCEEEEecCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence            999963                  47999999986   23 44678999999999999999999999999999875


No 2  
>1yqe_A Hypothetical UPF0204 protein AF0625; AF0625,sulfur SAD, structural genomics, PSI, protein structure initiative; 1.83A {Archaeoglobus fulgidus} SCOP: c.56.7.1
Probab=100.00  E-value=1.3e-90  Score=654.84  Aligned_cols=268  Identities=29%  Similarity=0.468  Sum_probs=245.0

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEec
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSK   80 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSR   80 (317)
                      ||++||+|++||||+||+++|+++++|++++.  +++++|+.++|+|+++++++||+|++|++|++++|  +|+|||+||
T Consensus         4 mm~~iv~S~~DpAs~~i~~~L~~~~~~~~~~~--~~~~~y~~~~~~l~~~~~~~i~~d~ld~~~~~~~g--~d~iIflSR   79 (282)
T 1yqe_A            4 HMKLVVCSESDTAGQNIKDNLLTFADFEEKDV--GEFKLYLSDEFYIAETKERLIYADHIDEKLAKYID--FEEILFASR   79 (282)
T ss_dssp             SCEEEEEETTCHHHHHHHHHHTTSSCCEEEEE--TTEEEEECSSCEEEEESSCGGGCTTHHHHHTTTCC--CSEEEEEEE
T ss_pred             cEEEEEEeCCCchhHHHHHHHHHhcCcccccC--CCcceeecCcEEEEEecCceeeccchhhhhhhccC--CCEEEEEec
Confidence            89999999999999999999999999998765  58899999999999999999999999999966443  699999999


Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCC
Q 021113           81 HTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKP  158 (317)
Q Consensus        81 H~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~P  158 (317)
                      |+|++++|+||||+||||     ++|.|||+|+++|+|+|++ ++||+.|+++++ +  .++|+|+||||||||| +++|
T Consensus        80 H~s~~~~p~LTvH~tGN~-----~~a~~GG~p~~la~a~P~~~~~~L~~l~~~~~-~--~~~fev~~EATHHGPt~~~~P  151 (282)
T 1yqe_A           80 HSSKDGRKIFTVHVSGNV-----GTADFGGKPYSLAKPSPQTMKNYVLALRERLD-R--KPEFEFTMEVTHHGPSEISKP  151 (282)
T ss_dssp             EECTTCCCEEEEECCBCS-----SCCTTSSCTTCBCCBCHHHHHHHHHHHHTTGG-G--STTCEEEECCSCSSCCCCCSC
T ss_pred             cccCCCCceEEEeCCCCC-----CccccCCCCCccccCCHHHHHHHHHHHHHHhc-c--CCCcEEEEEccccCCCCCCCC
Confidence            999999999999999997     5999999999999999996 688899988764 2  3479999999999999 8999


Q ss_pred             ceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCC
Q 021113          159 TMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG  238 (317)
Q Consensus       159 s~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~k  238 (317)
                      ++||||||||+||+|++|+++||++|+++++        +|..   +.+++||||||||+||||+++|++++|||||+||
T Consensus       152 s~FVEIGSte~eW~d~~a~~~vA~av~~~l~--------~~~~---~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~pk  220 (282)
T 1yqe_A          152 SAFYEIGSTEEEWKDREAAEVVAEAMLDAIR--------AEKM---DWNVAVGVGGTHYAPRQTEIMLTTTFTFGHNFAK  220 (282)
T ss_dssp             EEEEEEEESHHHHTCHHHHHHHHHHHHHHHH--------CCCC---CCEEEEEECSCTTCHHHHHHHHHBSEEEEEEECG
T ss_pred             cEEEEeCCCHHHhCChHHHHHHHHHHHHHhc--------cccc---cCCEEEEeCCCCcChHHHHHHhhCCeeEEeeccc
Confidence            9999999999999999999999999999985        2332   4678999999999999999999999999999999


Q ss_pred             CccC-CCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCCC
Q 021113          239 YSLP-MEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPND  315 (317)
Q Consensus       239 y~l~-~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~~  315 (317)
                      |+++ +.                  ++++.+|+++++      ...|||||||+|+++|++|+++|+++||+|+|+++
T Consensus       221 y~l~~~~------------------~e~~~~ai~~~~------~~~~~iD~K~~k~~~r~~i~~~l~~~gi~v~k~~~  274 (282)
T 1yqe_A          221 YTFEHLT------------------AEFLVKAVKLSE------AEYIIIDEKSVNSAVKKIVNEAAEVAGVEVLKSKK  274 (282)
T ss_dssp             GGGGGCC------------------HHHHHHHHHHHT------CSEEEECTTTCCHHHHHHHHHHHHHHTCEEEEHHH
T ss_pred             cchhhcC------------------HHHHHHHHHhcC------CCEEEEecCCCCHHHHHHHHHHHHHCCCEEEehhH
Confidence            9998 53                  578999999974      45699999999999999999999999999999754


No 3  
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=56.30  E-value=43  Score=25.95  Aligned_cols=74  Identities=20%  Similarity=0.199  Sum_probs=43.3

Q ss_pred             CCcccCCCCCchHHHHHHHHHHHhCCCCCCeeEEEeecccCCCCCCCceE--EEecCC---hhhhcC-hhHHHHHHHHHH
Q 021113          112 PGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMF--LEIGST---EEYWKR-QDAAQVIALLIW  185 (317)
Q Consensus       112 p~~la~a~P~l~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt~~~Ps~F--vEIGSt---e~eW~d-~~a~~~vA~av~  185 (317)
                      .++..++++...++...|+++++.+++.+.|++.-|   -||.. .|.+.  |.|+..   .-.... ..|-+..|+..|
T Consensus         3 ~~~~~m~~~~~~n~Kt~LqE~~Q~~~~~p~Y~~~~~---~Gp~H-~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL   78 (97)
T 1x49_A            3 SGSSGMASDTPGFYMDKLNKYRQMHGVAITYKELST---SGPPH-DRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAV   78 (97)
T ss_dssp             CCCCSSSCCCTTHHHHHHHHHHHHHTCCEEEEEEEE---ESCSS-SCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHH
T ss_pred             CccccccCCCCCCHHHHHHHHHHHcCCCCeEEEEEe---eCCCC-CCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHH
Confidence            355666666656677888888888777667776433   36652 23333  333331   122333 445577777778


Q ss_pred             Hhhc
Q 021113          186 DGLG  189 (317)
Q Consensus       186 ~~l~  189 (317)
                      +.|.
T Consensus        79 ~~L~   82 (97)
T 1x49_A           79 DILD   82 (97)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            7774


No 4  
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=53.76  E-value=8.5  Score=33.07  Aligned_cols=33  Identities=30%  Similarity=0.417  Sum_probs=23.2

Q ss_pred             CCCceEEEecC-----ChhhhcChhHHHHHHHHHHHhh
Q 021113          156 SKPTMFLEIGS-----TEEYWKRQDAAQVIALLIWDGL  188 (317)
Q Consensus       156 ~~Ps~FvEIGS-----te~eW~d~~a~~~vA~av~~~l  188 (317)
                      +.|++.||+|-     .++.|+++.-.+.+|++|.+++
T Consensus       135 ~~PavLvE~gFisN~~d~~~l~~~~~~~~~A~ai~~gI  172 (179)
T 1jwq_A          135 TMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGI  172 (179)
T ss_dssp             SSCEEEEEEEETTSHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEecCCCCHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            67999999993     4556788766666666665543


No 5  
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=41.95  E-value=40  Score=28.63  Aligned_cols=59  Identities=14%  Similarity=0.044  Sum_probs=35.0

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEe
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLS   79 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflS   79 (317)
                      |+++||.+.-+...+.....|.+...         ..     .+++++.+.+    .+++.+..++.  ..+|.|||.|
T Consensus         1 MkiLii~ghP~~~~S~~~~~l~~~~~---------~~-----~~v~v~dL~~----~~D~~~~~~~l--~~aD~iV~~~   59 (177)
T 3ha2_A            1 MQTLIIVAHPELARSNTQPFFKAAIE---------NF-----SNVTWHPLVA----DFNVEQEQSLL--LQNDRIILEF   59 (177)
T ss_dssp             CCEEEEECCTTTTTCSSHHHHHHHHT---------TC-----TTEEEEECCT----TCCHHHHHHHH--HTCSEEEEEE
T ss_pred             CeEEEEEcCCCcccCHHHHHHHHHHh---------cC-----CCEEEEECCC----cccHHHHHHHH--HhCCEEEEEC
Confidence            89999999988444444444433321         10     2466666665    34455444333  3689999975


No 6  
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=37.17  E-value=19  Score=32.29  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=23.4

Q ss_pred             CCCceEEEecC-----ChhhhcChhHHHHHHHHHHHhh
Q 021113          156 SKPTMFLEIGS-----TEEYWKRQDAAQVIALLIWDGL  188 (317)
Q Consensus       156 ~~Ps~FvEIGS-----te~eW~d~~a~~~vA~av~~~l  188 (317)
                      +.|++.||+|=     .++.+.++.-.+.+|++|.+++
T Consensus       183 ~mPaVLVE~GFisN~~d~~~L~~~~~q~kiA~aIa~GI  220 (234)
T 3ne8_A          183 DVPSVLIEIGYLSNKEDEKLLNNPQWRKQMAASIAYSI  220 (234)
T ss_dssp             SSCEEEEESCCTTSHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeccCCCHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            67999999994     4456777766666666665553


No 7  
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=33.33  E-value=69  Score=25.89  Aligned_cols=25  Identities=12%  Similarity=-0.052  Sum_probs=16.9

Q ss_pred             CEEEEEEeCC--CcccccHHHHHHcCC
Q 021113            1 MVILIVATTI--DPASINPANALLAMP   25 (317)
Q Consensus         1 M~~~iv~S~~--DpAs~ni~~~Ll~~~   25 (317)
                      |++++|+.+.  +--+..+++.+.+..
T Consensus         4 Mkilii~~S~r~~g~t~~la~~~~~~~   30 (184)
T 1rli_A            4 MKIAVINGGTRSGGNTDVLAEKAVQGF   30 (184)
T ss_dssp             -CEEEEESSCSSCCHHHHHHHHHHTTT
T ss_pred             cEEEEEECCCCCCccHHHHHHHHHcCC
Confidence            6788888774  455677888876644


No 8  
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=32.49  E-value=66  Score=29.47  Aligned_cols=47  Identities=15%  Similarity=0.147  Sum_probs=37.9

Q ss_pred             cHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          261 TWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       261 ~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      ...+++++|.++       |.-.+++--.++..++.+++.+.+++.|+.++-||
T Consensus        83 ~~~~~v~ea~~~-------Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN  129 (297)
T 2yv2_A           83 FAPDAVYEAVDA-------GIRLVVVITEGIPVHDTMRFVNYARQKGATIIGPN  129 (297)
T ss_dssp             GHHHHHHHHHHT-------TCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSS
T ss_pred             HHHHHHHHHHHC-------CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC
Confidence            457888888876       22235666789999999999999999999999887


No 9  
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=31.49  E-value=95  Score=26.16  Aligned_cols=25  Identities=32%  Similarity=0.284  Sum_probs=18.5

Q ss_pred             CEEEEEEeCCCccc--ccHHHHHHcCC
Q 021113            1 MVILIVATTIDPAS--INPANALLAMP   25 (317)
Q Consensus         1 M~~~iv~S~~DpAs--~ni~~~Ll~~~   25 (317)
                      |++++|++...+-|  ..+++.+++.+
T Consensus         1 MkiLiI~gspr~~s~t~~l~~~~~~~~   27 (196)
T 3lcm_A            1 MKILIVYTHPNPTSFNAEILKQVQTNL   27 (196)
T ss_dssp             CEEEEEECCSCTTSHHHHHHHHHHHHS
T ss_pred             CEEEEEEeCCCCCChHHHHHHHHHHHh
Confidence            99999998877766  55777766554


No 10 
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=30.53  E-value=29  Score=32.83  Aligned_cols=33  Identities=15%  Similarity=0.280  Sum_probs=23.2

Q ss_pred             CCCceEEEec-----CChhhhcChhHHHHHHHHHHHhh
Q 021113          156 SKPTMFLEIG-----STEEYWKRQDAAQVIALLIWDGL  188 (317)
Q Consensus       156 ~~Ps~FvEIG-----Ste~eW~d~~a~~~vA~av~~~l  188 (317)
                      +.|++.||+|     ..++.+.++.-.+.+|++|.+++
T Consensus       146 ~~PaVLVE~GFisN~~D~~~L~~~~~q~~iA~aIa~GI  183 (326)
T 1xov_A          146 KGTAVLLEVCFVDRKEDANAIHKSGMYDKLGIAIAEGL  183 (326)
T ss_dssp             SSCEEEEEEEETTCHHHHHHHTSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEEecCCCCHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            6799999999     34455778666666666665554


No 11 
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=29.11  E-value=46  Score=23.62  Aligned_cols=32  Identities=19%  Similarity=0.265  Sum_probs=27.4

Q ss_pred             ccCCCCceEEEEecCCCchHHHHHHHHHHHhc
Q 021113          275 SAFPGGEILAHLDHKSFKGWQKNAITGFLSEQ  306 (317)
Q Consensus       275 ~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~  306 (317)
                      +.|.|-.|...+|++.++.+--++|+.+|+++
T Consensus        16 AkYkGd~Vsf~Ld~~~iP~~~IeKIE~lL~e~   47 (52)
T 3kz5_E           16 VLYKGDKMVLNLDRSRVPTECIEKIEAILKEL   47 (52)
T ss_dssp             EEEETTEEEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred             eEecCCeEEEEeccccCCHHHHHHHHHHHHHH
Confidence            34556677889999999999999999999986


No 12 
>3vsj_A 2-amino-5-chlorophenol 1,6-dioxygenase alpha SUBU; CNBC,oxidoreductase, 2-His-1-carboxylate facial triad motif, extradiol dioxygenase,; HET: 2XP; 2.30A {Comamonas testosteroni} PDB: 3vsh_A 3vsi_A* 3vsg_A*
Probab=28.81  E-value=2.3e+02  Score=25.10  Aligned_cols=116  Identities=13%  Similarity=0.005  Sum_probs=59.8

Q ss_pred             CccEEEEEecCCCCCCCCceee--------ecCCCCCCCCCCCCCCCCCCCcccCCCCCchHHHHHHHHHHHhCCCCCCe
Q 021113           71 VVGEVIFLSKHTAVSNRPALTV--------HPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEF  142 (317)
Q Consensus        71 ~~d~iIflSRH~s~~~~p~LTv--------H~tGN~~~~~~~~a~~GG~p~~la~a~P~l~~~l~~L~~~~~~~~~~~~f  142 (317)
                      +||.||++|=|--.. .+.+++        |..|+|.       .+| .-.--.+.+|.+   -+.|.+.....    ++
T Consensus        42 ~Pd~ivvis~h~~~~-~~~~~i~~~~~~~~~~~~~f~-------~~g-~~~y~~~gd~~l---a~~i~~~~~~~----g~  105 (271)
T 3vsj_A           42 RPDVVLVYSTQWLAV-LDQQWLTRPRSEGVHVDENWY-------EFG-DLAYDIRADTAL---AEACVTSSPLH----GV  105 (271)
T ss_dssp             CCSEEEEEEEEEEES-SSEEEECCSEEEEEECCTTTG-------GGC-CEEEEEEBCHHH---HHHHHHHHHHT----TC
T ss_pred             CCCEEEEEcCCcccc-cCcEEEeccCCCcccccCCch-------hhc-cccccCcCCHHH---HHHHHHHHHHC----CC
Confidence            699999999995444 344443        5566651       344 111112234443   24444444433    45


Q ss_pred             eEEEe--ecc---cC---------CCC-CCCceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCc
Q 021113          143 EITLE--GTH---HG---------PVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNK  207 (317)
Q Consensus       143 ev~~E--ATH---HG---------Pt~-~~Ps~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~  207 (317)
                      ++...  ..|   ||         |.. +.|.+=|=+++.    .+++-+..++++|-+.+..            .++..
T Consensus       106 ~~~~~~~~~~~lDHg~~vpl~~l~~~~~~~pvv~i~~~~~----~~~~~~~~lG~al~~~~~~------------~~~~v  169 (271)
T 3vsj_A          106 HARGVNYDGFPIDTGTITACTLMGIGTDAFPLVVGSNNLY----HSGEITEKLAALAVDCAKD------------QNKRV  169 (271)
T ss_dssp             CEEEECCTTCCCCHHHHHHHHHHTCSSSSSCEEEEEEETT----CCHHHHHHHHHHHHHHHHH------------TTCCE
T ss_pred             cEEeecCCCCCcchhHHHHHHHHhccCCCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH------------cCCCE
Confidence            55421  222   44         332 378877777753    3455555556665444310            12345


Q ss_pred             eEEEeCCC-CCc
Q 021113          208 VLLGIGGG-HYA  218 (317)
Q Consensus       208 ~~ig~GGg-HYa  218 (317)
                      .+||=||. ||-
T Consensus       170 lii~SGdlsH~l  181 (271)
T 3vsj_A          170 AVVGVGGLSGSL  181 (271)
T ss_dssp             EEEEECCSCCCC
T ss_pred             EEEEECccccCC
Confidence            67777764 876


No 13 
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=27.39  E-value=68  Score=29.33  Aligned_cols=47  Identities=19%  Similarity=0.198  Sum_probs=37.1

Q ss_pred             cHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          261 TWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       261 ~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      ...+++++|.++       |.-.+++--.++..++.+++.+.+++.|+.++-||
T Consensus        82 ~~~~~v~ea~~~-------Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN  128 (294)
T 2yv1_A           82 FAKDAVFEAIDA-------GIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGPN  128 (294)
T ss_dssp             HHHHHHHHHHHT-------TCSEEEECCSCCCHHHHHHHHHHHHHHTCEEECSS
T ss_pred             HHHHHHHHHHHC-------CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC
Confidence            346778888775       22335666778999999999999999999999887


No 14 
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=26.94  E-value=24  Score=30.13  Aligned_cols=32  Identities=22%  Similarity=0.203  Sum_probs=23.0

Q ss_pred             CCCceEEEec--CC---hhhhcChhHHHHHHHHHHHhh
Q 021113          156 SKPTMFLEIG--ST---EEYWKRQDAAQVIALLIWDGL  188 (317)
Q Consensus       156 ~~Ps~FvEIG--St---e~eW~d~~a~~~vA~av~~~l  188 (317)
                      +.|++.||+|  |.   ++.+.+ .-.+.+|++|.+++
T Consensus       138 ~~PavLvE~gFisN~~d~~~L~~-~~~~~iA~aIa~gI  174 (180)
T 3qay_A          138 KPTAVLIESFFCDNKEDYDKAKK-LGHEGIAKLIVEGV  174 (180)
T ss_dssp             SSEEEEEEEEETTCHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEEecccCCHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            6799999999  33   344556 56677777777765


No 15 
>1b4u_B LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: c.56.6.1 PDB: 1bou_B
Probab=24.77  E-value=3.3e+02  Score=24.77  Aligned_cols=129  Identities=15%  Similarity=0.141  Sum_probs=60.2

Q ss_pred             CccEEEEEec-CCCC---CCCCceeeecCCCCCCCCCCCCCC-CCCCCcccCCCCCchHHHHHHHHHHHhCCCCCCeeEE
Q 021113           71 VVGEVIFLSK-HTAV---SNRPALTVHPIGVPHLREGEPLPQ-GGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEIT  145 (317)
Q Consensus        71 ~~d~iIflSR-H~s~---~~~p~LTvH~tGN~~~~~~~~a~~-GG~p~~la~a~P~l~~~l~~L~~~~~~~~~~~~fev~  145 (317)
                      +||.||++|= |...   +..|.+++=....+.     -.++ +| |.... +.|.-..+-+.|.+.....    +|++.
T Consensus        50 ~Pd~Ivvis~~H~~~~~~~~~~~~~I~~~~~~~-----~~d~~~G-~~~~~-~~~G~peLA~~i~~~l~~~----g~~~~  118 (302)
T 1b4u_B           50 MPDVVILVYNDHASAFDMNIIPTFAIGCAETFK-----PADEGWG-PRPVP-DVKGHPDLAWHIAQSLILD----EFDMT  118 (302)
T ss_dssp             SCSEEEEEECCCSSSCCTTEEESBEEECSSEEC-----BCBCSSS-BCSSC-CEECCHHHHHHHHHHHHHT----TCCCE
T ss_pred             CCCEEEEEeCCcccccccccCCceEEecCCCCc-----cCcccCC-CcCCC-CCCCCHHHHHHHHHHHHhc----CCCee
Confidence            7999999999 5432   223444443333221     1233 34 33232 2232222334455554443    46666


Q ss_pred             Eeecc---cC---------CCCC---CCceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEE
Q 021113          146 LEGTH---HG---------PVTS---KPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLL  210 (317)
Q Consensus       146 ~EATH---HG---------Pt~~---~Ps~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~i  210 (317)
                      ..++|   ||         |..+   .|.+=|=|++...-=-+.+-+..++++|-+++.        .|.  .++...+|
T Consensus       119 ~~~~~~lDHG~~vpL~~l~p~~d~~~ipVVpisv~~~~~p~~~~~~~~~lG~aL~~~~~--------~~~--~d~~VlII  188 (302)
T 1b4u_B          119 IMNQMDVDHGCTVPLSMIFGEPEEWPCKVIPFPVNVVTYPPPSGKRCFALGDSIRAAVE--------SFP--EDLNVHVW  188 (302)
T ss_dssp             EESSCCBCHHHHHHHHHHHCSCSSCSSEEEEEEBCCSSSCCCCHHHHHHHHHHHHHHHH--------TSS--SCCEEEEE
T ss_pred             ccCCcCCCceeeehHHHhcCcccCCcCcEEEEeecCCCCCCCCHHHHHHHHHHHHHHHH--------hcC--CCCCEEEE
Confidence            55545   55         3323   677766676554221112333344444433321        110  12345666


Q ss_pred             EeCCC-CCccc
Q 021113          211 GIGGG-HYAPR  220 (317)
Q Consensus       211 g~GGg-HYapr  220 (317)
                      |=||- ||-+.
T Consensus       189 gSG~lSH~l~~  199 (302)
T 1b4u_B          189 GTGGMSHQLQG  199 (302)
T ss_dssp             EECCSSCCCSS
T ss_pred             EeCccccCCCC
Confidence            77774 88763


No 16 
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=23.86  E-value=1.1e+02  Score=25.38  Aligned_cols=31  Identities=10%  Similarity=0.058  Sum_probs=25.7

Q ss_pred             eEEEEecCCCchHHHHHHHHHHHhcCCcccC
Q 021113          282 ILAHLDHKSFKGWQKNAITGFLSEQNIKVGK  312 (317)
Q Consensus       282 ~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k  312 (317)
                      -.+++..........+.+.++++.+|+||.-
T Consensus        37 Pvil~G~g~~~~~a~~~l~~lae~~~iPV~~   67 (170)
T 3cf4_G           37 PLLMVGTLALDPELLDRVVKISKAANIPIAA   67 (170)
T ss_dssp             EEEEECSTTCCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CEEEECCCccchhHHHHHHHHHHHhCCCEEE
Confidence            3678877666777888999999999999964


No 17 
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=23.14  E-value=1.2e+02  Score=27.39  Aligned_cols=47  Identities=19%  Similarity=0.127  Sum_probs=36.5

Q ss_pred             cHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          261 TWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       261 ~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      ...+++++|.++-       .-.+++--.++.-++.+++.+.+++.|+.++-||
T Consensus        76 ~~~~~~~ea~~~G-------i~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPN  122 (288)
T 2nu8_A           76 FCKDSILEAIDAG-------IKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPN  122 (288)
T ss_dssp             GHHHHHHHHHHTT-------CSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSS
T ss_pred             HHHHHHHHHHHCC-------CCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence            4578888888763       2234555667888888899999999999999887


No 18 
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=21.89  E-value=1.7e+02  Score=20.83  Aligned_cols=58  Identities=26%  Similarity=0.225  Sum_probs=32.2

Q ss_pred             HHHHHHHHHhCCCC-CCeeEEEeecccCCCCCCCceEE--EecCC---hhhh--cChhHHHHHHHHHHHhh
Q 021113          126 LRLLKKIALSHNLV-PEFEITLEGTHHGPVTSKPTMFL--EIGST---EEYW--KRQDAAQVIALLIWDGL  188 (317)
Q Consensus       126 l~~L~~~~~~~~~~-~~fev~~EATHHGPt~~~Ps~Fv--EIGSt---e~eW--~d~~a~~~vA~av~~~l  188 (317)
                      ...|+++++.++.. |.|++.-|    ||.- .|.+.+  .|+..   +-..  +-..|-+..|+..|+.|
T Consensus         6 Kt~LqE~~q~~~~~~p~Y~~~~~----Gp~h-~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L   71 (73)
T 3adg_A            6 KSRLQEYAQKYKLPTPVYEIVKE----GPSH-KSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALREL   71 (73)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEE----SSTT-SCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCEEEEEeE----CCCC-CCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHh
Confidence            35677777777664 68987743    7762 233333  23321   1122  33456666677777655


No 19 
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=21.15  E-value=1.1e+02  Score=24.88  Aligned_cols=25  Identities=12%  Similarity=0.008  Sum_probs=17.3

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCC
Q 021113            1 MVILIVATTIDPASINPANALLAMP   25 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~   25 (317)
                      |+++||+.+..--+..+++.+.+.+
T Consensus         2 mkilii~~S~~g~t~~la~~i~~~l   26 (198)
T 3b6i_A            2 AKVLVLYYSMYGHIETMARAVAEGA   26 (198)
T ss_dssp             CEEEEEECCSSSHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCcHHHHHHHHHHHHH
Confidence            5788888876555566777775543


No 20 
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=21.03  E-value=95  Score=28.27  Aligned_cols=47  Identities=15%  Similarity=-0.021  Sum_probs=36.7

Q ss_pred             cHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          261 TWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       261 ~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      ...+++++|.++       |.-.+++--.+++.++.+++.+.+++.|+.++-||
T Consensus        76 ~~~~~~~ea~~~-------Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigPN  122 (288)
T 1oi7_A           76 AAADAALEAAHA-------GIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGN  122 (288)
T ss_dssp             HHHHHHHHHHHT-------TCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEESS
T ss_pred             HHHHHHHHHHHC-------CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            346777777765       22235666778999999999999999999999887


No 21 
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=20.26  E-value=78  Score=24.73  Aligned_cols=25  Identities=16%  Similarity=0.006  Sum_probs=18.8

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCC
Q 021113            1 MVILIVATTIDPASINPANALLAMP   25 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~   25 (317)
                      |+++|++.+.---+..+++.|.+.+
T Consensus         1 mki~iiy~S~~Gnt~~~a~~i~~~l   25 (147)
T 1f4p_A            1 PKALIVYGSTTGNTEYTAETIAREL   25 (147)
T ss_dssp             CEEEEEEECSSSHHHHHHHHHHHHH
T ss_pred             CeEEEEEECCcCHHHHHHHHHHHHH
Confidence            8999999887666677777775543


Done!