Query 021116
Match_columns 317
No_of_seqs 283 out of 2024
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 12:58:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021116.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021116hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9n_A Possible methyltransfer 100.0 8.6E-30 2.9E-34 221.6 21.9 185 107-303 1-187 (189)
2 2fpo_A Methylase YHHF; structu 100.0 2.7E-28 9.2E-33 215.8 17.9 182 107-302 12-193 (202)
3 2ift_A Putative methylase HI07 100.0 2.3E-28 7.9E-33 216.1 17.0 181 108-301 12-194 (201)
4 2fhp_A Methylase, putative; al 100.0 5.9E-28 2E-32 207.4 18.5 185 107-301 2-186 (187)
5 2esr_A Methyltransferase; stru 99.9 3.1E-25 1.1E-29 190.0 16.3 170 120-302 2-171 (177)
6 1ws6_A Methyltransferase; stru 99.9 2.6E-24 9E-29 181.7 16.8 169 108-299 1-170 (171)
7 1nv8_A HEMK protein; class I a 99.7 4.9E-17 1.7E-21 151.6 16.8 141 115-273 89-253 (284)
8 2b78_A Hypothetical protein SM 99.7 7.5E-17 2.6E-21 156.5 15.7 114 155-274 212-336 (385)
9 2igt_A SAM dependent methyltra 99.7 3E-16 1E-20 149.7 18.3 132 130-274 134-277 (332)
10 3lpm_A Putative methyltransfer 99.7 4.5E-17 1.5E-21 148.6 11.3 137 118-272 21-179 (259)
11 3axs_A Probable N(2),N(2)-dime 99.7 3.8E-17 1.3E-21 159.5 9.5 124 155-293 52-179 (392)
12 3k6r_A Putative transferase PH 99.7 1.4E-16 4.6E-21 149.0 11.8 103 154-270 124-226 (278)
13 3c0k_A UPF0064 protein YCCW; P 99.7 6.8E-16 2.3E-20 149.8 17.0 113 155-273 220-343 (396)
14 1dus_A MJ0882; hypothetical pr 99.7 7.5E-16 2.6E-20 131.4 14.8 146 109-273 11-161 (194)
15 2dul_A N(2),N(2)-dimethylguano 99.7 4.9E-16 1.7E-20 150.9 15.0 125 126-270 25-165 (378)
16 3v97_A Ribosomal RNA large sub 99.7 4.9E-16 1.7E-20 161.8 16.0 109 155-272 539-660 (703)
17 2b3t_A Protein methyltransfera 99.7 1.1E-15 3.7E-20 140.6 16.1 138 115-272 76-241 (276)
18 3tma_A Methyltransferase; thum 99.7 7.8E-16 2.7E-20 146.9 14.1 141 130-289 185-338 (354)
19 2as0_A Hypothetical protein PH 99.6 1.3E-15 4.6E-20 147.6 13.9 112 155-272 217-338 (396)
20 2ozv_A Hypothetical protein AT 99.6 7.4E-16 2.5E-20 141.3 10.3 116 154-272 35-173 (260)
21 2frn_A Hypothetical protein PH 99.6 1.5E-15 5.1E-20 140.7 12.1 103 155-271 125-227 (278)
22 1o9g_A RRNA methyltransferase; 99.6 2.1E-16 7.3E-21 143.0 6.2 138 155-300 51-242 (250)
23 3ldu_A Putative methylase; str 99.6 1.9E-15 6.4E-20 147.0 13.2 158 130-307 177-382 (385)
24 3k0b_A Predicted N6-adenine-sp 99.6 2E-15 6.8E-20 147.3 13.1 159 130-307 183-388 (393)
25 4dzr_A Protein-(glutamine-N5) 99.6 5.1E-16 1.7E-20 134.8 7.8 130 128-271 9-167 (215)
26 3njr_A Precorrin-6Y methylase; 99.6 1.1E-15 3.8E-20 135.1 10.1 121 132-274 39-159 (204)
27 4dcm_A Ribosomal RNA large sub 99.6 2.5E-15 8.6E-20 145.5 12.9 140 118-275 192-340 (375)
28 3dmg_A Probable ribosomal RNA 99.6 4E-15 1.4E-19 144.5 13.7 137 120-274 199-345 (381)
29 1wxx_A TT1595, hypothetical pr 99.6 3.3E-15 1.1E-19 144.4 12.9 111 155-273 209-329 (382)
30 3e05_A Precorrin-6Y C5,15-meth 99.6 6.6E-15 2.3E-19 128.7 13.5 121 132-272 24-145 (204)
31 3ldg_A Putative uncharacterize 99.6 8E-15 2.7E-19 142.7 15.3 156 130-304 176-378 (384)
32 4dmg_A Putative uncharacterize 99.6 4.5E-15 1.5E-19 144.8 13.4 105 155-271 214-329 (393)
33 3bt7_A TRNA (uracil-5-)-methyl 99.6 1.2E-14 3.9E-19 140.1 15.8 141 119-273 182-331 (369)
34 3mti_A RRNA methylase; SAM-dep 99.6 2.9E-15 9.8E-20 128.6 10.4 107 154-271 21-137 (185)
35 1l3i_A Precorrin-6Y methyltran 99.6 2E-14 7E-19 122.2 15.4 122 130-271 15-136 (192)
36 3gdh_A Trimethylguanosine synt 99.6 7.5E-16 2.6E-20 137.9 6.3 122 130-269 59-181 (241)
37 3evz_A Methyltransferase; NYSG 99.6 2.5E-15 8.4E-20 133.4 9.5 108 154-272 54-182 (230)
38 1uwv_A 23S rRNA (uracil-5-)-me 99.6 1.3E-14 4.4E-19 142.8 15.2 138 118-273 253-393 (433)
39 3tm4_A TRNA (guanine N2-)-meth 99.6 9.3E-15 3.2E-19 141.0 13.7 150 130-299 200-363 (373)
40 3grz_A L11 mtase, ribosomal pr 99.6 1.9E-14 6.6E-19 125.6 13.4 131 155-300 60-196 (205)
41 2oo3_A Protein involved in cat 99.6 1.9E-15 6.5E-20 141.3 6.9 120 139-273 82-202 (283)
42 3u81_A Catechol O-methyltransf 99.6 3.9E-14 1.3E-18 125.8 14.9 114 155-272 58-173 (221)
43 3a27_A TYW2, uncharacterized p 99.6 3.7E-15 1.3E-19 137.7 8.4 104 154-272 118-222 (272)
44 2jjq_A Uncharacterized RNA met 99.6 6.7E-14 2.3E-18 137.8 16.6 134 116-273 258-391 (425)
45 2yxd_A Probable cobalt-precorr 99.6 1.3E-13 4.5E-18 116.5 16.1 120 130-274 17-136 (183)
46 2yx1_A Hypothetical protein MJ 99.5 2.7E-14 9.2E-19 136.0 13.0 98 155-270 195-292 (336)
47 3duw_A OMT, O-methyltransferas 99.5 1.4E-13 4.9E-18 121.5 16.2 110 155-271 58-169 (223)
48 3eey_A Putative rRNA methylase 99.5 8.5E-15 2.9E-19 126.9 8.1 108 154-270 21-140 (197)
49 3f4k_A Putative methyltransfer 99.5 5E-14 1.7E-18 126.5 13.4 125 130-270 27-151 (257)
50 3ntv_A MW1564 protein; rossman 99.5 6.5E-14 2.2E-18 125.7 14.1 105 155-270 71-177 (232)
51 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.5E-14 1.5E-18 119.6 12.3 123 130-272 7-130 (178)
52 3tr6_A O-methyltransferase; ce 99.5 1.3E-13 4.5E-18 121.8 15.6 111 155-271 64-176 (225)
53 2h00_A Methyltransferase 10 do 99.5 4.1E-15 1.4E-19 134.4 5.7 121 114-243 24-152 (254)
54 1o54_A SAM-dependent O-methylt 99.5 4.4E-14 1.5E-18 129.7 12.5 142 113-272 59-216 (277)
55 1wy7_A Hypothetical protein PH 99.5 1.8E-13 6.2E-18 119.4 15.7 118 130-269 28-148 (207)
56 3dr5_A Putative O-methyltransf 99.5 5.2E-14 1.8E-18 126.4 11.7 104 156-269 57-163 (221)
57 1jsx_A Glucose-inhibited divis 99.5 1.3E-13 4.6E-18 120.0 13.8 139 130-287 44-185 (207)
58 4hc4_A Protein arginine N-meth 99.5 1E-14 3.4E-19 141.7 7.2 103 154-268 82-188 (376)
59 3ajd_A Putative methyltransfer 99.5 1.5E-13 5.1E-18 126.8 14.6 111 154-271 82-213 (274)
60 2pjd_A Ribosomal RNA small sub 99.5 1.4E-14 4.7E-19 137.9 7.8 136 118-274 166-308 (343)
61 1iy9_A Spermidine synthase; ro 99.5 7.9E-14 2.7E-18 129.3 12.6 153 104-271 28-191 (275)
62 3tfw_A Putative O-methyltransf 99.5 3.1E-13 1.1E-17 122.7 16.0 108 155-271 63-172 (248)
63 2nxc_A L11 mtase, ribosomal pr 99.5 6.5E-14 2.2E-18 127.9 11.5 140 128-292 102-246 (254)
64 1sui_A Caffeoyl-COA O-methyltr 99.5 1.5E-13 5.3E-18 125.1 13.8 110 155-269 79-190 (247)
65 3kkz_A Uncharacterized protein 99.5 1E-13 3.5E-18 125.9 12.5 125 130-270 27-151 (267)
66 3bzb_A Uncharacterized protein 99.5 3.6E-13 1.2E-17 124.7 15.1 127 130-271 61-207 (281)
67 3mb5_A SAM-dependent methyltra 99.5 1.9E-13 6.4E-18 123.2 12.6 106 154-274 92-199 (255)
68 3r3h_A O-methyltransferase, SA 99.5 6.8E-14 2.3E-18 127.1 9.7 111 155-271 60-172 (242)
69 2avd_A Catechol-O-methyltransf 99.5 4.9E-13 1.7E-17 118.4 15.0 110 155-270 69-180 (229)
70 1nkv_A Hypothetical protein YJ 99.5 1.7E-13 5.9E-18 122.9 12.2 125 128-270 16-141 (256)
71 3c3y_A Pfomt, O-methyltransfer 99.5 4.1E-13 1.4E-17 121.2 14.6 111 155-270 70-182 (237)
72 3c3p_A Methyltransferase; NP_9 99.5 1.8E-13 6.2E-18 120.1 11.8 103 155-269 56-160 (210)
73 1mjf_A Spermidine synthase; sp 99.5 3.8E-13 1.3E-17 124.9 14.6 148 106-270 30-194 (281)
74 3uwp_A Histone-lysine N-methyl 99.5 3.3E-13 1.1E-17 132.5 14.7 125 131-270 156-289 (438)
75 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2.9E-13 9.9E-18 121.2 12.9 110 155-272 34-153 (218)
76 3kr9_A SAM-dependent methyltra 99.5 1.1E-13 3.8E-18 125.6 9.7 124 154-288 14-141 (225)
77 1inl_A Spermidine synthase; be 99.5 3.1E-13 1.1E-17 126.5 12.7 153 104-271 43-207 (296)
78 3r0q_C Probable protein argini 99.5 1.4E-13 4.8E-18 132.9 10.4 105 154-270 62-170 (376)
79 2gpy_A O-methyltransferase; st 99.5 4.5E-13 1.5E-17 119.5 12.7 106 155-269 54-160 (233)
80 2o07_A Spermidine synthase; st 99.5 4.7E-13 1.6E-17 126.0 13.4 154 103-270 47-210 (304)
81 2qm3_A Predicted methyltransfe 99.5 3.5E-13 1.2E-17 129.8 12.8 108 154-271 171-280 (373)
82 1yzh_A TRNA (guanine-N(7)-)-me 99.5 3.3E-13 1.1E-17 119.0 11.6 108 155-271 41-158 (214)
83 3m6w_A RRNA methylase; rRNA me 99.5 4.6E-13 1.6E-17 133.3 13.9 105 154-269 100-229 (464)
84 2pt6_A Spermidine synthase; tr 99.4 1.2E-12 4E-17 124.2 15.4 150 107-271 72-232 (321)
85 3cbg_A O-methyltransferase; cy 99.4 1.8E-12 6E-17 116.4 15.4 108 155-270 72-183 (232)
86 3dlc_A Putative S-adenosyl-L-m 99.4 5.5E-13 1.9E-17 115.8 11.7 124 129-270 25-149 (219)
87 3m4x_A NOL1/NOP2/SUN family pr 99.4 6.9E-13 2.4E-17 131.8 13.5 106 154-269 104-234 (456)
88 3orh_A Guanidinoacetate N-meth 99.4 2.5E-13 8.4E-18 122.6 9.4 106 154-269 59-170 (236)
89 1xdz_A Methyltransferase GIDB; 99.4 9.5E-13 3.3E-17 118.3 13.2 130 130-271 46-176 (240)
90 4gek_A TRNA (CMO5U34)-methyltr 99.4 9.4E-13 3.2E-17 121.3 13.4 105 154-270 69-179 (261)
91 3lec_A NADB-rossmann superfami 99.4 2.8E-13 9.5E-18 123.4 9.7 124 154-288 20-147 (230)
92 3jwh_A HEN1; methyltransferase 99.4 1.1E-12 3.6E-17 115.5 13.1 121 133-270 14-142 (217)
93 3q7e_A Protein arginine N-meth 99.4 5E-13 1.7E-17 127.7 11.7 104 154-268 65-172 (349)
94 2fyt_A Protein arginine N-meth 99.4 7E-13 2.4E-17 126.4 12.7 102 154-266 63-168 (340)
95 2y1w_A Histone-arginine methyl 99.4 3.1E-13 1.1E-17 129.0 10.3 103 154-268 49-154 (348)
96 1ne2_A Hypothetical protein TA 99.4 5.5E-13 1.9E-17 116.0 11.0 116 130-271 30-148 (200)
97 3v97_A Ribosomal RNA large sub 99.4 6.7E-13 2.3E-17 138.2 13.4 158 130-302 172-380 (703)
98 3g89_A Ribosomal RNA small sub 99.4 8.4E-13 2.9E-17 120.6 12.5 106 155-271 80-186 (249)
99 3q87_B N6 adenine specific DNA 99.4 5.1E-13 1.8E-17 114.4 10.2 120 155-298 23-159 (170)
100 1g6q_1 HnRNP arginine N-methyl 99.4 9.8E-13 3.4E-17 124.5 13.1 114 136-267 26-143 (328)
101 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.3E-12 4.5E-17 115.9 12.9 108 155-271 38-155 (213)
102 3hem_A Cyclopropane-fatty-acyl 99.4 2.2E-12 7.5E-17 119.5 14.6 104 154-271 71-185 (302)
103 2xvm_A Tellurite resistance pr 99.4 5.6E-12 1.9E-16 108.3 16.1 103 154-269 31-136 (199)
104 3bus_A REBM, methyltransferase 99.4 2.3E-12 7.9E-17 116.8 14.4 107 154-270 60-167 (273)
105 3m70_A Tellurite resistance pr 99.4 1.9E-12 6.6E-17 118.6 14.0 102 155-270 120-224 (286)
106 2hnk_A SAM-dependent O-methylt 99.4 2.5E-12 8.6E-17 115.3 14.2 110 155-269 60-181 (239)
107 3b3j_A Histone-arginine methyl 99.4 3.2E-13 1.1E-17 134.8 8.7 106 154-269 157-263 (480)
108 3jwg_A HEN1, methyltransferase 99.4 1.7E-12 5.7E-17 114.2 12.3 125 130-271 11-143 (219)
109 3fpf_A Mtnas, putative unchara 99.4 3.8E-12 1.3E-16 119.9 15.2 102 154-270 121-223 (298)
110 2r6z_A UPF0341 protein in RSP 99.4 3.8E-13 1.3E-17 124.0 8.1 84 155-243 83-173 (258)
111 1ixk_A Methyltransferase; open 99.4 9.7E-13 3.3E-17 124.1 11.0 106 154-270 117-247 (315)
112 3dh0_A SAM dependent methyltra 99.4 5.2E-12 1.8E-16 110.6 15.0 133 154-297 36-188 (219)
113 3gnl_A Uncharacterized protein 99.4 5.9E-13 2E-17 122.2 9.2 124 154-288 20-147 (244)
114 3lbf_A Protein-L-isoaspartate 99.4 1.3E-12 4.4E-17 114.2 11.0 113 135-271 64-176 (210)
115 1ve3_A Hypothetical protein PH 99.4 2.8E-12 9.6E-17 112.6 13.1 104 155-271 38-144 (227)
116 3ll7_A Putative methyltransfer 99.4 2.7E-12 9.3E-17 125.9 14.2 132 156-300 94-245 (410)
117 1zx0_A Guanidinoacetate N-meth 99.4 1.1E-12 3.8E-17 117.3 9.9 104 155-269 60-170 (236)
118 3vc1_A Geranyl diphosphate 2-C 99.4 1.6E-12 5.5E-17 121.2 11.1 106 154-270 116-222 (312)
119 2frx_A Hypothetical protein YE 99.4 1.9E-12 6.4E-17 129.3 12.3 106 155-270 117-247 (479)
120 4htf_A S-adenosylmethionine-de 99.4 3.6E-12 1.2E-16 116.8 13.2 106 155-270 68-174 (285)
121 2yvl_A TRMI protein, hypotheti 99.4 1.8E-12 6.3E-17 115.6 10.7 105 154-273 90-194 (248)
122 2qfm_A Spermine synthase; sper 99.4 2.3E-12 8E-17 124.4 11.2 114 155-272 188-317 (364)
123 1xj5_A Spermidine synthase 1; 99.4 9.4E-12 3.2E-16 118.8 15.3 108 155-270 120-236 (334)
124 1g8a_A Fibrillarin-like PRE-rR 99.4 1.8E-12 6.3E-17 114.9 9.6 125 130-269 52-178 (227)
125 1u2z_A Histone-lysine N-methyl 99.4 7.9E-12 2.7E-16 123.4 14.7 120 134-269 228-359 (433)
126 1vl5_A Unknown conserved prote 99.3 5.6E-12 1.9E-16 113.8 12.4 104 154-269 36-140 (260)
127 2f8l_A Hypothetical protein LM 99.3 1.6E-12 5.3E-17 123.6 9.1 103 155-270 130-257 (344)
128 1uir_A Polyamine aminopropyltr 99.3 5.7E-12 2E-16 118.9 12.7 107 155-270 77-196 (314)
129 2pwy_A TRNA (adenine-N(1)-)-me 99.3 8E-12 2.7E-16 112.1 13.0 104 154-272 95-201 (258)
130 3thr_A Glycine N-methyltransfe 99.3 1.1E-11 3.9E-16 113.5 14.2 125 132-271 41-177 (293)
131 3adn_A Spermidine synthase; am 99.3 1.1E-12 3.8E-17 123.1 7.5 107 155-270 83-199 (294)
132 2fk8_A Methoxy mycolic acid sy 99.3 6.6E-12 2.2E-16 116.9 12.7 105 154-272 89-197 (318)
133 2o57_A Putative sarcosine dime 99.3 8.7E-12 3E-16 114.7 12.8 106 154-270 81-188 (297)
134 2oyr_A UPF0341 protein YHIQ; a 99.3 6.3E-13 2.2E-17 122.9 5.1 80 157-244 90-177 (258)
135 1xxl_A YCGJ protein; structura 99.3 7.8E-12 2.7E-16 112.0 12.0 105 154-270 20-125 (239)
136 2b2c_A Spermidine synthase; be 99.3 4E-12 1.4E-16 120.4 10.3 107 155-270 108-223 (314)
137 1dl5_A Protein-L-isoaspartate 99.3 5.3E-12 1.8E-16 118.6 11.1 116 134-272 61-178 (317)
138 2ipx_A RRNA 2'-O-methyltransfe 99.3 6.1E-12 2.1E-16 112.2 11.0 106 155-271 77-184 (233)
139 1ri5_A MRNA capping enzyme; me 99.3 5.2E-12 1.8E-16 115.3 10.7 109 154-272 63-177 (298)
140 1pjz_A Thiopurine S-methyltran 99.3 3.5E-12 1.2E-16 112.2 9.1 101 155-265 22-136 (203)
141 1kpg_A CFA synthase;, cyclopro 99.3 1.1E-11 3.7E-16 113.5 12.5 103 154-270 63-169 (287)
142 2yxe_A Protein-L-isoaspartate 99.3 1.3E-11 4.3E-16 108.2 12.3 114 136-272 65-180 (215)
143 2vdv_E TRNA (guanine-N(7)-)-me 99.3 6.1E-12 2.1E-16 113.6 10.4 109 155-271 49-175 (246)
144 2okc_A Type I restriction enzy 99.3 2.6E-12 9E-17 126.5 8.7 123 130-270 153-308 (445)
145 1sqg_A SUN protein, FMU protei 99.3 6.8E-12 2.3E-16 123.0 11.4 106 154-269 245-374 (429)
146 2kw5_A SLR1183 protein; struct 99.3 2.5E-11 8.7E-16 105.1 13.8 104 155-272 30-134 (202)
147 1yb2_A Hypothetical protein TA 99.3 7E-12 2.4E-16 115.1 10.7 103 154-272 109-214 (275)
148 3g5t_A Trans-aconitate 3-methy 99.3 1.1E-11 3.9E-16 114.5 12.2 109 155-267 36-147 (299)
149 2pbf_A Protein-L-isoaspartate 99.3 1.2E-11 4E-16 109.4 11.7 107 154-271 79-195 (227)
150 3g07_A 7SK snRNA methylphospha 99.3 2.8E-12 9.5E-17 119.1 7.9 111 154-269 45-220 (292)
151 1fbn_A MJ fibrillarin homologu 99.3 8.1E-12 2.8E-16 111.5 10.5 103 155-268 74-177 (230)
152 3e8s_A Putative SAM dependent 99.3 2.7E-11 9.3E-16 105.6 13.6 116 138-274 42-157 (227)
153 1vbf_A 231AA long hypothetical 99.3 1.4E-11 4.7E-16 109.1 11.9 112 135-272 57-168 (231)
154 2yxl_A PH0851 protein, 450AA l 99.3 5.2E-12 1.8E-16 124.7 10.1 108 154-270 258-390 (450)
155 1jg1_A PIMT;, protein-L-isoasp 99.3 8.8E-12 3E-16 111.5 10.6 117 134-273 77-193 (235)
156 2b25_A Hypothetical protein; s 99.3 8.9E-12 3E-16 117.6 11.1 108 154-273 104-223 (336)
157 3dtn_A Putative methyltransfer 99.3 8.3E-12 2.9E-16 110.6 10.2 103 154-270 43-149 (234)
158 3g5l_A Putative S-adenosylmeth 99.3 1.3E-11 4.3E-16 110.8 11.4 103 154-270 43-146 (253)
159 3ofk_A Nodulation protein S; N 99.3 6.8E-12 2.3E-16 109.8 9.4 102 154-270 50-155 (216)
160 3ujc_A Phosphoethanolamine N-m 99.3 5.7E-12 1.9E-16 113.0 9.1 122 129-270 36-160 (266)
161 1i9g_A Hypothetical protein RV 99.3 1.6E-11 5.5E-16 111.9 12.3 105 154-272 98-206 (280)
162 1y8c_A S-adenosylmethionine-de 99.3 1.9E-11 6.4E-16 108.2 12.0 120 133-271 20-144 (246)
163 2pxx_A Uncharacterized protein 99.3 7.8E-12 2.7E-16 108.4 9.3 107 154-273 41-163 (215)
164 4hg2_A Methyltransferase type 99.3 5.4E-12 1.9E-16 116.0 8.6 98 155-270 39-136 (257)
165 1i1n_A Protein-L-isoaspartate 99.3 3.9E-11 1.3E-15 106.0 13.9 104 154-272 76-185 (226)
166 1zq9_A Probable dimethyladenos 99.3 6.3E-12 2.2E-16 116.9 9.1 92 134-243 14-105 (285)
167 1wzn_A SAM-dependent methyltra 99.3 4.8E-11 1.7E-15 106.8 14.6 103 155-271 41-147 (252)
168 3ocj_A Putative exported prote 99.3 5.9E-12 2E-16 117.0 8.9 108 154-272 117-230 (305)
169 3lcc_A Putative methyl chlorid 99.3 5.1E-12 1.8E-16 112.4 8.0 104 155-270 66-172 (235)
170 3dli_A Methyltransferase; PSI- 99.3 1.6E-11 5.5E-16 109.6 11.1 120 130-273 22-144 (240)
171 2i7c_A Spermidine synthase; tr 99.3 1.9E-11 6.4E-16 113.6 11.8 107 155-270 78-193 (283)
172 3bwc_A Spermidine synthase; SA 99.3 1.6E-11 5.4E-16 115.3 11.2 109 155-271 95-212 (304)
173 2p7i_A Hypothetical protein; p 99.3 2E-11 6.7E-16 107.9 11.0 115 136-272 29-144 (250)
174 2ex4_A Adrenal gland protein A 99.3 8.5E-12 2.9E-16 111.5 8.7 105 155-270 79-186 (241)
175 2ih2_A Modification methylase 99.3 3.6E-12 1.2E-16 123.0 6.7 115 129-271 20-166 (421)
176 3sm3_A SAM-dependent methyltra 99.3 1.9E-11 6.4E-16 107.4 10.4 105 155-270 30-142 (235)
177 3mgg_A Methyltransferase; NYSG 99.3 2.6E-11 9E-16 110.1 11.6 105 154-269 36-142 (276)
178 2b9e_A NOL1/NOP2/SUN domain fa 99.3 4.2E-11 1.4E-15 113.2 13.2 83 154-242 101-185 (309)
179 1xtp_A LMAJ004091AAA; SGPP, st 99.3 1.4E-11 4.7E-16 110.1 9.3 104 154-270 92-198 (254)
180 3i9f_A Putative type 11 methyl 99.3 3.4E-11 1.1E-15 101.5 11.1 120 154-293 16-151 (170)
181 3bkw_A MLL3908 protein, S-aden 99.2 3.3E-11 1.1E-15 106.8 11.4 103 154-270 42-145 (243)
182 3h2b_A SAM-dependent methyltra 99.2 4.2E-11 1.4E-15 103.7 11.8 101 156-273 42-145 (203)
183 2ar0_A M.ecoki, type I restric 99.2 1.2E-11 4.2E-16 125.1 9.6 125 130-270 151-313 (541)
184 2p8j_A S-adenosylmethionine-de 99.2 3.5E-11 1.2E-15 104.3 11.1 106 154-272 22-131 (209)
185 3gjy_A Spermidine synthase; AP 99.2 3.1E-11 1E-15 114.7 11.2 106 157-271 91-202 (317)
186 3iv6_A Putative Zn-dependent a 99.2 1.6E-11 5.5E-16 113.6 8.9 104 154-271 44-150 (261)
187 3ckk_A TRNA (guanine-N(7)-)-me 99.2 5.1E-11 1.8E-15 107.8 11.6 109 155-271 46-170 (235)
188 2h1r_A Dimethyladenosine trans 99.2 3.9E-11 1.3E-15 112.4 11.1 91 134-243 28-118 (299)
189 3g2m_A PCZA361.24; SAM-depende 99.2 2E-11 6.8E-16 112.9 8.9 120 134-273 69-194 (299)
190 3pfg_A N-methyltransferase; N, 99.2 3.8E-11 1.3E-15 108.5 10.3 97 155-269 50-151 (263)
191 3hnr_A Probable methyltransfer 99.2 4.5E-11 1.5E-15 104.7 10.4 99 155-270 45-146 (220)
192 3d2l_A SAM-dependent methyltra 99.2 5.3E-11 1.8E-15 105.4 10.8 103 155-272 33-140 (243)
193 3ou2_A SAM-dependent methyltra 99.2 5.7E-11 2E-15 103.3 10.8 102 154-272 45-149 (218)
194 1r18_A Protein-L-isoaspartate( 99.2 1.3E-10 4.3E-15 103.3 13.2 104 154-272 83-197 (227)
195 4df3_A Fibrillarin-like rRNA/T 99.2 5.1E-11 1.8E-15 108.6 10.7 126 129-269 55-182 (233)
196 3e23_A Uncharacterized protein 99.2 5.6E-11 1.9E-15 103.7 10.6 99 155-272 43-144 (211)
197 2yqz_A Hypothetical protein TT 99.2 4.4E-11 1.5E-15 107.2 10.1 103 154-269 38-141 (263)
198 2gb4_A Thiopurine S-methyltran 99.2 4.1E-11 1.4E-15 109.7 9.8 103 155-267 68-189 (252)
199 3l8d_A Methyltransferase; stru 99.2 1.3E-10 4.4E-15 103.0 12.5 101 155-270 53-154 (242)
200 3fzg_A 16S rRNA methylase; met 99.2 2.1E-11 7.2E-16 108.3 7.3 116 131-269 34-152 (200)
201 3gu3_A Methyltransferase; alph 99.2 7.7E-11 2.6E-15 108.4 11.3 105 154-271 21-128 (284)
202 3m33_A Uncharacterized protein 99.2 2.1E-11 7.3E-16 108.3 7.0 109 130-267 31-140 (226)
203 3lkd_A Type I restriction-modi 99.2 1.6E-10 5.3E-15 117.1 14.2 133 129-271 198-360 (542)
204 1nt2_A Fibrillarin-like PRE-rR 99.2 5E-11 1.7E-15 105.9 9.3 105 154-269 56-161 (210)
205 3bkx_A SAM-dependent methyltra 99.2 7.7E-11 2.6E-15 106.8 10.7 109 154-270 42-160 (275)
206 3mq2_A 16S rRNA methyltransfer 99.2 1.9E-11 6.5E-16 107.4 6.3 105 154-270 26-141 (218)
207 1m6y_A S-adenosyl-methyltransf 99.2 6.9E-11 2.4E-15 111.4 10.5 93 138-242 16-109 (301)
208 3tqs_A Ribosomal RNA small sub 99.2 5.3E-11 1.8E-15 109.6 9.1 117 134-269 15-132 (255)
209 4fsd_A Arsenic methyltransfera 99.2 1.1E-10 3.9E-15 112.4 11.8 112 154-269 82-203 (383)
210 2a14_A Indolethylamine N-methy 99.2 7.1E-12 2.4E-16 114.4 2.8 111 154-270 54-198 (263)
211 3cgg_A SAM-dependent methyltra 99.2 1.4E-10 4.8E-15 98.5 10.7 102 155-273 46-151 (195)
212 3bgv_A MRNA CAP guanine-N7 met 99.2 2.5E-10 8.6E-15 106.2 12.8 114 155-272 34-158 (313)
213 2p35_A Trans-aconitate 2-methy 99.2 7E-11 2.4E-15 105.8 8.6 100 154-270 32-133 (259)
214 3ccf_A Cyclopropane-fatty-acyl 99.1 1.1E-10 3.7E-15 106.6 9.9 101 154-272 56-157 (279)
215 2bm8_A Cephalosporin hydroxyla 99.1 2.9E-11 9.9E-16 109.3 5.8 99 155-269 81-187 (236)
216 2vdw_A Vaccinia virus capping 99.1 1.3E-10 4.5E-15 109.0 10.4 112 155-274 48-174 (302)
217 3ege_A Putative methyltransfer 99.1 8.5E-11 2.9E-15 106.7 8.5 115 130-270 16-131 (261)
218 3ggd_A SAM-dependent methyltra 99.1 2.3E-10 8E-15 102.0 11.0 107 154-270 55-164 (245)
219 3p2e_A 16S rRNA methylase; met 99.1 3.1E-11 1E-15 108.5 5.1 104 155-268 24-138 (225)
220 2gs9_A Hypothetical protein TT 99.1 1.6E-10 5.3E-15 100.7 9.3 100 155-273 36-136 (211)
221 1ej0_A FTSJ; methyltransferase 99.1 1.8E-10 6.3E-15 95.7 9.3 105 154-274 21-141 (180)
222 2i62_A Nicotinamide N-methyltr 99.1 1.5E-11 5E-16 110.4 2.0 111 154-270 55-199 (265)
223 3id6_C Fibrillarin-like rRNA/T 99.1 3.9E-10 1.3E-14 102.5 11.2 125 130-269 55-181 (232)
224 3khk_A Type I restriction-modi 99.1 6.9E-11 2.4E-15 119.7 6.6 101 128-243 225-341 (544)
225 3ftd_A Dimethyladenosine trans 99.1 2.9E-10 1E-14 104.0 10.1 116 134-270 17-132 (249)
226 3fut_A Dimethyladenosine trans 99.1 2.3E-10 8E-15 106.3 9.3 91 134-244 33-123 (271)
227 1qam_A ERMC' methyltransferase 99.1 6.7E-10 2.3E-14 100.9 11.4 90 134-243 16-106 (244)
228 3gru_A Dimethyladenosine trans 99.1 1.9E-10 6.4E-15 108.2 7.3 91 134-243 36-126 (295)
229 2cmg_A Spermidine synthase; tr 99.1 7.3E-11 2.5E-15 108.8 4.4 98 155-270 72-172 (262)
230 1qzz_A RDMB, aclacinomycin-10- 99.1 5.8E-10 2E-14 106.0 10.6 103 155-270 182-288 (374)
231 3bxo_A N,N-dimethyltransferase 99.1 4.4E-10 1.5E-14 99.2 9.1 98 155-270 40-142 (239)
232 3htx_A HEN1; HEN1, small RNA m 99.0 1.4E-09 4.7E-14 114.4 13.6 122 131-271 704-836 (950)
233 1tw3_A COMT, carminomycin 4-O- 99.0 6.1E-10 2.1E-14 105.4 9.9 104 155-271 183-290 (360)
234 3s1s_A Restriction endonucleas 99.0 6.8E-10 2.3E-14 116.4 10.2 108 128-243 295-411 (878)
235 4gqb_A Protein arginine N-meth 99.0 2.9E-10 9.8E-15 116.9 7.1 102 155-266 357-464 (637)
236 2avn_A Ubiquinone/menaquinone 99.0 1.5E-09 5.2E-14 98.1 10.7 99 155-271 54-154 (260)
237 2g72_A Phenylethanolamine N-me 99.0 6.3E-10 2.2E-14 102.2 8.2 112 154-269 70-215 (289)
238 2r3s_A Uncharacterized protein 99.0 1.2E-09 4E-14 102.1 9.8 104 155-270 165-272 (335)
239 3cc8_A Putative methyltransfer 99.0 8.6E-10 2.9E-14 96.2 8.4 100 155-271 32-132 (230)
240 3dou_A Ribosomal RNA large sub 99.0 4E-10 1.4E-14 98.7 6.2 105 154-274 24-144 (191)
241 1x19_A CRTF-related protein; m 99.0 2.9E-09 9.8E-14 101.1 12.2 102 155-269 190-295 (359)
242 3gwz_A MMCR; methyltransferase 99.0 4.5E-09 1.5E-13 100.6 13.6 103 155-270 202-308 (369)
243 3dp7_A SAM-dependent methyltra 99.0 1.8E-09 6.1E-14 103.2 10.6 106 155-270 179-288 (363)
244 3opn_A Putative hemolysin; str 99.0 1.8E-10 6.1E-15 104.3 2.8 99 154-268 36-136 (232)
245 3hp7_A Hemolysin, putative; st 98.9 2.8E-10 9.7E-15 106.8 3.0 100 154-268 84-184 (291)
246 3i53_A O-methyltransferase; CO 98.9 4E-09 1.4E-13 98.9 10.5 103 155-270 169-275 (332)
247 3uzu_A Ribosomal RNA small sub 98.9 2E-09 7E-14 100.2 8.4 94 134-242 28-125 (279)
248 2aot_A HMT, histamine N-methyl 98.9 7.2E-09 2.5E-13 95.5 11.9 112 155-270 52-173 (292)
249 3ufb_A Type I restriction-modi 98.9 2.3E-09 7.8E-14 108.2 9.2 102 130-243 199-314 (530)
250 3mcz_A O-methyltransferase; ad 98.9 2.6E-09 8.8E-14 100.8 9.0 104 156-269 180-287 (352)
251 1p91_A Ribosomal RNA large sub 98.9 4.2E-09 1.4E-13 95.3 10.1 96 155-272 85-181 (269)
252 2ip2_A Probable phenazine-spec 98.9 2.1E-09 7.2E-14 100.7 8.2 101 157-270 169-273 (334)
253 4e2x_A TCAB9; kijanose, tetron 98.9 2.2E-09 7.7E-14 103.7 8.5 101 155-270 107-209 (416)
254 4azs_A Methyltransferase WBDD; 98.9 4.7E-09 1.6E-13 106.4 10.6 76 155-238 66-141 (569)
255 4fzv_A Putative methyltransfer 98.9 8.8E-09 3E-13 99.3 11.8 83 154-243 147-235 (359)
256 1vlm_A SAM-dependent methyltra 98.9 8.5E-09 2.9E-13 90.7 10.6 94 155-271 47-141 (219)
257 3cvo_A Methyltransferase-like 98.9 1E-08 3.5E-13 91.5 10.7 105 156-269 31-154 (202)
258 2qe6_A Uncharacterized protein 98.9 3.8E-08 1.3E-12 90.8 14.9 109 156-272 78-199 (274)
259 1qyr_A KSGA, high level kasuga 98.9 5.5E-09 1.9E-13 95.8 9.1 92 135-243 8-102 (252)
260 2plw_A Ribosomal RNA methyltra 98.9 1.6E-08 5.4E-13 87.3 11.1 102 155-272 22-157 (201)
261 2nyu_A Putative ribosomal RNA 98.8 3.8E-09 1.3E-13 90.6 5.8 105 154-274 21-150 (196)
262 1yub_A Ermam, rRNA methyltrans 98.8 2.3E-10 7.7E-15 103.5 -2.7 116 136-271 17-147 (245)
263 1af7_A Chemotaxis receptor met 98.8 1.8E-08 6E-13 93.7 9.7 119 156-285 106-266 (274)
264 2wa2_A Non-structural protein 98.8 1.3E-09 4.5E-14 101.2 1.3 102 154-270 81-194 (276)
265 3ua3_A Protein arginine N-meth 98.8 2.1E-08 7.3E-13 103.7 10.0 105 156-266 410-531 (745)
266 3lcv_B Sisomicin-gentamicin re 98.7 1E-08 3.5E-13 95.1 6.2 98 155-268 132-235 (281)
267 2oxt_A Nucleoside-2'-O-methylt 98.7 1.5E-09 5.2E-14 100.2 0.1 102 154-270 73-186 (265)
268 2zfu_A Nucleomethylin, cerebra 98.7 1.9E-08 6.5E-13 87.8 7.0 105 155-289 67-178 (215)
269 3sso_A Methyltransferase; macr 98.7 2.3E-08 7.9E-13 97.8 8.2 100 155-270 216-325 (419)
270 3lst_A CALO1 methyltransferase 98.6 2.6E-08 8.8E-13 94.4 6.5 100 155-270 184-287 (348)
271 2p41_A Type II methyltransfera 98.6 9.3E-09 3.2E-13 96.8 3.1 103 154-271 81-193 (305)
272 3frh_A 16S rRNA methylase; met 98.6 7.3E-08 2.5E-12 88.4 7.3 126 155-299 105-250 (253)
273 2qy6_A UPF0209 protein YFCK; s 98.5 3.4E-08 1.1E-12 91.0 4.0 133 155-292 60-237 (257)
274 3giw_A Protein of unknown func 98.5 1.4E-06 4.9E-11 81.1 12.5 112 156-272 79-203 (277)
275 3o4f_A Spermidine synthase; am 98.4 5.2E-07 1.8E-11 84.7 9.1 108 154-270 82-199 (294)
276 2xyq_A Putative 2'-O-methyl tr 98.4 4.3E-07 1.5E-11 85.1 7.6 92 154-271 62-173 (290)
277 1fp2_A Isoflavone O-methyltran 98.4 2.5E-07 8.7E-12 87.5 6.0 95 155-270 188-289 (352)
278 1fp1_D Isoliquiritigenin 2'-O- 98.4 2.2E-07 7.5E-12 88.7 5.1 94 155-269 209-306 (372)
279 2k4m_A TR8_protein, UPF0146 pr 98.4 1.9E-06 6.6E-11 73.1 10.2 130 131-300 16-148 (153)
280 2wk1_A NOVP; transferase, O-me 98.4 1.8E-06 6E-11 80.6 10.6 106 155-270 106-245 (282)
281 4a6d_A Hydroxyindole O-methylt 98.4 1E-06 3.5E-11 83.9 9.1 102 155-270 179-284 (353)
282 3reo_A (ISO)eugenol O-methyltr 98.3 5.4E-07 1.9E-11 86.2 6.9 95 155-270 203-301 (368)
283 1wg8_A Predicted S-adenosylmet 98.3 2.1E-06 7.2E-11 80.1 10.5 80 154-242 21-100 (285)
284 2zig_A TTHA0409, putative modi 98.3 2.2E-06 7.7E-11 79.7 9.9 61 134-204 222-282 (297)
285 3c6k_A Spermine synthase; sper 98.3 2.5E-06 8.5E-11 82.7 10.4 110 155-270 205-332 (381)
286 2c7p_A Modification methylase 98.3 6.6E-07 2.3E-11 85.0 6.3 73 155-242 10-82 (327)
287 1g55_A DNA cytosine methyltran 98.3 4.7E-07 1.6E-11 86.4 5.3 73 157-241 3-78 (343)
288 3g7u_A Cytosine-specific methy 98.2 1.9E-06 6.7E-11 83.3 8.4 79 157-242 3-82 (376)
289 1g60_A Adenine-specific methyl 98.2 2.4E-06 8.3E-11 78.0 8.2 61 134-204 199-259 (260)
290 3p9c_A Caffeic acid O-methyltr 98.2 1.2E-06 4.1E-11 83.7 6.3 95 155-270 201-299 (364)
291 1zg3_A Isoflavanone 4'-O-methy 98.2 1.2E-06 4.2E-11 83.0 5.7 94 155-269 193-293 (358)
292 2ld4_A Anamorsin; methyltransf 98.2 1.3E-06 4.4E-11 73.9 4.6 90 154-270 11-102 (176)
293 2qrv_A DNA (cytosine-5)-methyl 97.8 4.2E-05 1.4E-09 71.6 8.5 78 155-242 15-94 (295)
294 3ubt_Y Modification methylase 97.7 2.5E-05 8.6E-10 73.0 4.8 71 158-242 2-72 (331)
295 3me5_A Cytosine-specific methy 97.6 7.8E-05 2.7E-09 74.4 7.7 83 156-242 88-180 (482)
296 4h0n_A DNMT2; SAH binding, tra 97.6 5.6E-05 1.9E-09 71.9 6.0 75 157-242 4-80 (333)
297 1boo_A Protein (N-4 cytosine-s 97.6 3.7E-05 1.3E-09 72.5 4.6 62 154-219 251-312 (323)
298 1i4w_A Mitochondrial replicati 97.6 0.00027 9.1E-09 67.9 10.3 81 133-219 37-118 (353)
299 3qv2_A 5-cytosine DNA methyltr 97.6 6.4E-05 2.2E-09 71.4 5.4 75 155-241 9-86 (327)
300 3tka_A Ribosomal RNA small sub 97.5 0.00024 8.1E-09 67.9 8.5 82 154-242 56-139 (347)
301 1g60_A Adenine-specific methyl 97.5 9.4E-05 3.2E-09 67.3 5.1 56 208-270 5-75 (260)
302 3evf_A RNA-directed RNA polyme 97.5 1.7E-05 5.7E-10 73.7 -0.0 107 154-271 73-186 (277)
303 3gcz_A Polyprotein; flavivirus 97.4 2.4E-05 8.2E-10 72.8 0.0 106 154-271 89-203 (282)
304 4auk_A Ribosomal RNA large sub 97.3 0.00037 1.3E-08 67.3 7.8 70 154-240 210-279 (375)
305 1boo_A Protein (N-4 cytosine-s 97.3 0.00018 6.2E-09 67.7 5.5 60 206-272 13-87 (323)
306 1eg2_A Modification methylase 97.3 0.00022 7.4E-09 67.3 5.9 61 207-272 38-109 (319)
307 1eg2_A Modification methylase 97.3 0.00032 1.1E-08 66.2 7.1 61 133-203 228-291 (319)
308 2zig_A TTHA0409, putative modi 97.0 0.00057 1.9E-08 63.3 5.4 59 207-270 21-98 (297)
309 3p8z_A Mtase, non-structural p 96.9 0.00062 2.1E-08 62.1 4.4 101 154-267 77-184 (267)
310 3eld_A Methyltransferase; flav 96.9 0.00017 5.8E-09 67.6 0.4 106 154-271 80-193 (300)
311 2px2_A Genome polyprotein [con 96.9 0.0003 1E-08 64.8 2.1 99 154-270 72-184 (269)
312 4ft4_B DNA (cytosine-5)-methyl 96.7 0.0044 1.5E-07 64.7 9.1 57 156-219 212-274 (784)
313 2py6_A Methyltransferase FKBM; 96.6 0.0038 1.3E-07 60.6 7.9 58 154-212 225-288 (409)
314 3swr_A DNA (cytosine-5)-methyl 96.6 0.0044 1.5E-07 66.8 8.4 81 155-242 539-629 (1002)
315 3lkz_A Non-structural protein 96.4 0.0009 3.1E-08 62.8 1.8 102 154-267 93-202 (321)
316 3vyw_A MNMC2; tRNA wobble urid 96.4 0.0078 2.7E-07 56.7 7.9 127 156-292 97-250 (308)
317 3av4_A DNA (cytosine-5)-methyl 96.3 0.011 3.6E-07 65.5 9.4 80 155-242 850-940 (1330)
318 4dkj_A Cytosine-specific methy 95.9 0.0041 1.4E-07 60.6 3.7 44 156-200 10-59 (403)
319 3r24_A NSP16, 2'-O-methyl tran 95.8 0.016 5.4E-07 54.5 7.0 111 137-273 93-221 (344)
320 3pvc_A TRNA 5-methylaminomethy 95.4 0.012 4.1E-07 60.4 4.8 131 155-292 58-235 (689)
321 3tos_A CALS11; methyltransfera 95.2 0.24 8.1E-06 45.3 12.6 108 156-270 70-218 (257)
322 1f8f_A Benzyl alcohol dehydrog 95.1 0.068 2.3E-06 50.3 8.9 96 154-269 189-289 (371)
323 3b5i_A S-adenosyl-L-methionine 95.0 0.12 4.3E-06 49.6 10.3 19 156-174 53-71 (374)
324 1pl8_A Human sorbitol dehydrog 94.5 0.18 6.1E-06 47.2 9.9 99 154-269 170-273 (356)
325 2efj_A 3,7-dimethylxanthine me 94.4 0.071 2.4E-06 51.5 7.1 77 156-240 53-158 (384)
326 4dcm_A Ribosomal RNA large sub 94.1 0.15 5E-06 48.7 8.6 101 155-272 38-139 (375)
327 3s2e_A Zinc-containing alcohol 93.9 0.18 6.3E-06 46.6 8.6 94 154-269 165-263 (340)
328 1m6e_X S-adenosyl-L-methionnin 93.8 0.032 1.1E-06 53.5 3.2 79 155-238 51-146 (359)
329 3fpc_A NADP-dependent alcohol 93.6 0.18 6.1E-06 47.0 8.0 97 154-269 165-266 (352)
330 2dph_A Formaldehyde dismutase; 93.5 0.13 4.3E-06 49.0 6.9 101 154-269 184-299 (398)
331 4ej6_A Putative zinc-binding d 93.4 0.13 4.6E-06 48.5 6.7 99 154-269 181-284 (370)
332 1pqw_A Polyketide synthase; ro 92.7 0.23 7.9E-06 42.0 6.6 95 154-269 37-137 (198)
333 1kol_A Formaldehyde dehydrogen 92.7 0.38 1.3E-05 45.5 8.8 100 154-268 184-299 (398)
334 1cdo_A Alcohol dehydrogenase; 92.5 0.38 1.3E-05 45.1 8.6 96 154-269 191-294 (374)
335 1p0f_A NADP-dependent alcohol 92.2 0.38 1.3E-05 45.1 8.1 96 154-269 190-293 (373)
336 3m6i_A L-arabinitol 4-dehydrog 92.1 1.2 4E-05 41.5 11.3 102 154-269 178-283 (363)
337 1e3i_A Alcohol dehydrogenase, 92.1 0.46 1.6E-05 44.6 8.6 96 154-269 194-297 (376)
338 2fzw_A Alcohol dehydrogenase c 91.9 0.44 1.5E-05 44.6 8.1 96 154-269 189-292 (373)
339 3ip1_A Alcohol dehydrogenase, 91.8 0.54 1.9E-05 44.7 8.8 99 154-270 212-319 (404)
340 3uko_A Alcohol dehydrogenase c 91.8 0.38 1.3E-05 45.3 7.6 96 154-269 192-295 (378)
341 3jv7_A ADH-A; dehydrogenase, n 91.4 0.59 2E-05 43.2 8.3 98 154-270 170-271 (345)
342 2hcy_A Alcohol dehydrogenase 1 91.4 0.46 1.6E-05 44.1 7.6 96 154-270 168-270 (347)
343 1v3u_A Leukotriene B4 12- hydr 91.4 0.54 1.8E-05 43.2 8.0 94 154-269 144-244 (333)
344 3gms_A Putative NADPH:quinone 91.3 0.31 1.1E-05 45.1 6.4 96 154-270 143-244 (340)
345 2jhf_A Alcohol dehydrogenase E 91.2 0.62 2.1E-05 43.6 8.4 96 154-269 190-293 (374)
346 4b7c_A Probable oxidoreductase 91.0 0.5 1.7E-05 43.5 7.4 95 154-269 148-248 (336)
347 4eez_A Alcohol dehydrogenase 1 90.8 1.7 5.8E-05 39.9 10.9 101 154-270 162-264 (348)
348 1vj0_A Alcohol dehydrogenase, 90.8 0.68 2.3E-05 43.7 8.3 100 154-269 194-298 (380)
349 2eih_A Alcohol dehydrogenase; 90.8 0.76 2.6E-05 42.5 8.5 96 154-270 165-266 (343)
350 2d8a_A PH0655, probable L-thre 90.6 0.49 1.7E-05 43.9 7.0 97 155-270 167-268 (348)
351 3uog_A Alcohol dehydrogenase; 90.4 0.85 2.9E-05 42.6 8.5 96 154-270 188-288 (363)
352 1e3j_A NADP(H)-dependent ketos 89.7 1.3 4.3E-05 41.1 9.0 98 154-269 167-271 (352)
353 2h6e_A ADH-4, D-arabinose 1-de 89.3 1.6 5.4E-05 40.3 9.4 95 155-269 170-269 (344)
354 1rjw_A ADH-HT, alcohol dehydro 89.1 1 3.4E-05 41.7 7.8 94 154-269 163-261 (339)
355 2j3h_A NADP-dependent oxidored 89.0 0.74 2.5E-05 42.4 6.8 94 154-268 154-254 (345)
356 3ps9_A TRNA 5-methylaminomethy 88.9 0.85 2.9E-05 46.4 7.7 167 119-292 26-243 (676)
357 4fn4_A Short chain dehydrogena 88.8 3 0.0001 37.5 10.6 82 154-239 5-92 (254)
358 1wly_A CAAR, 2-haloacrylate re 88.5 1.7 5.8E-05 39.8 8.9 95 154-269 144-244 (333)
359 1jvb_A NAD(H)-dependent alcoho 88.5 0.72 2.5E-05 42.7 6.4 96 154-269 169-271 (347)
360 4dvj_A Putative zinc-dependent 88.3 1.2 4.2E-05 41.6 7.9 96 155-268 171-269 (363)
361 4eye_A Probable oxidoreductase 88.2 1.2 4.2E-05 41.1 7.7 95 154-269 158-257 (342)
362 3qwb_A Probable quinone oxidor 88.1 1 3.5E-05 41.3 7.1 96 154-270 147-248 (334)
363 1qor_A Quinone oxidoreductase; 87.8 1.1 3.9E-05 40.9 7.1 96 154-270 139-240 (327)
364 1uuf_A YAHK, zinc-type alcohol 87.7 1.8 6.2E-05 40.6 8.7 94 154-269 193-288 (369)
365 2c0c_A Zinc binding alcohol de 87.5 2.1 7.1E-05 40.0 8.9 94 154-269 162-261 (362)
366 3jyn_A Quinone oxidoreductase; 87.4 1.1 3.7E-05 41.1 6.9 97 154-271 139-241 (325)
367 1yb5_A Quinone oxidoreductase; 87.3 2 6.7E-05 40.0 8.6 95 154-269 169-269 (351)
368 4dup_A Quinone oxidoreductase; 87.2 1.6 5.6E-05 40.5 8.0 95 154-270 166-266 (353)
369 4a2c_A Galactitol-1-phosphate 87.1 3.8 0.00013 37.5 10.4 102 154-271 159-262 (346)
370 2g1p_A DNA adenine methylase; 86.8 0.42 1.4E-05 43.8 3.6 70 207-285 157-243 (278)
371 2zb4_A Prostaglandin reductase 85.1 2.9 9.8E-05 38.7 8.5 95 154-268 157-259 (357)
372 3two_A Mannitol dehydrogenase; 84.6 2.1 7.3E-05 39.5 7.3 90 154-270 175-266 (348)
373 2j8z_A Quinone oxidoreductase; 84.4 2.3 7.7E-05 39.5 7.4 95 154-269 161-261 (354)
374 2dq4_A L-threonine 3-dehydroge 84.0 0.94 3.2E-05 41.9 4.5 94 155-269 164-262 (343)
375 2dpo_A L-gulonate 3-dehydrogen 83.8 11 0.00037 34.9 11.8 99 157-270 7-124 (319)
376 1iz0_A Quinone oxidoreductase; 83.8 3.1 0.0001 37.5 7.9 91 154-269 124-218 (302)
377 2dpm_A M.dpnii 1, protein (ade 82.2 2.4 8.3E-05 38.8 6.5 82 188-285 156-256 (284)
378 3t4x_A Oxidoreductase, short c 82.0 10 0.00034 33.4 10.4 83 154-240 8-94 (267)
379 3ic5_A Putative saccharopine d 81.4 10 0.00035 28.1 9.0 71 155-242 4-80 (118)
380 3fbg_A Putative arginate lyase 81.4 5.1 0.00017 36.9 8.5 93 155-269 150-248 (346)
381 2b5w_A Glucose dehydrogenase; 81.3 3.4 0.00012 38.3 7.3 94 157-270 174-274 (357)
382 3ioy_A Short-chain dehydrogena 81.1 11 0.00036 34.4 10.5 84 154-240 6-96 (319)
383 3lyl_A 3-oxoacyl-(acyl-carrier 80.8 15 0.00052 31.5 11.0 82 154-240 3-91 (247)
384 3nyw_A Putative oxidoreductase 80.7 11 0.00039 32.7 10.3 84 154-240 5-96 (250)
385 3o38_A Short chain dehydrogena 80.6 17 0.00058 31.6 11.4 84 154-240 20-110 (266)
386 3qiv_A Short-chain dehydrogena 80.5 18 0.00061 31.1 11.4 82 154-240 7-95 (253)
387 3i42_A Response regulator rece 80.3 16 0.00054 27.2 11.3 67 180-255 5-71 (127)
388 3lf2_A Short chain oxidoreduct 80.3 25 0.00086 30.7 12.4 83 154-240 6-96 (265)
389 4g81_D Putative hexonate dehyd 80.2 6.6 0.00023 35.2 8.6 82 154-239 7-94 (255)
390 3gaz_A Alcohol dehydrogenase s 79.9 4.2 0.00014 37.5 7.4 95 154-269 149-246 (343)
391 3i1j_A Oxidoreductase, short c 79.4 18 0.00062 30.9 11.0 80 154-240 12-103 (247)
392 3kht_A Response regulator; PSI 79.4 19 0.00064 27.5 11.2 69 179-254 6-74 (144)
393 1xg5_A ARPG836; short chain de 78.9 14 0.00049 32.4 10.4 82 155-239 31-119 (279)
394 3f6c_A Positive transcription 78.8 12 0.0004 28.2 8.6 79 180-269 3-81 (134)
395 3svt_A Short-chain type dehydr 78.8 20 0.00067 31.6 11.3 84 154-240 9-100 (281)
396 1rjd_A PPM1P, carboxy methyl t 78.7 22 0.00076 33.0 12.0 109 155-269 97-233 (334)
397 3iup_A Putative NADPH:quinone 78.7 1.9 6.5E-05 40.6 4.7 74 155-238 170-247 (379)
398 3tjr_A Short chain dehydrogena 78.7 9 0.00031 34.5 9.1 82 154-240 29-117 (301)
399 2qxy_A Response regulator; reg 78.4 20 0.00068 27.2 10.6 79 179-270 5-83 (142)
400 1zcj_A Peroxisomal bifunctiona 78.3 15 0.0005 35.7 11.1 95 157-267 38-148 (463)
401 3gt7_A Sensor protein; structu 78.3 22 0.00076 27.7 12.0 68 179-255 8-75 (154)
402 3gaf_A 7-alpha-hydroxysteroid 78.2 23 0.00079 30.8 11.5 81 154-239 10-97 (256)
403 3ucx_A Short chain dehydrogena 78.2 13 0.00046 32.5 9.9 81 154-239 9-96 (264)
404 3h7a_A Short chain dehydrogena 78.1 6.1 0.00021 34.6 7.6 81 154-240 5-92 (252)
405 3llv_A Exopolyphosphatase-rela 77.9 17 0.00058 28.4 9.6 68 156-240 6-79 (141)
406 3hzh_A Chemotaxis response reg 77.7 19 0.00066 28.2 10.0 70 180-255 38-107 (157)
407 1f0y_A HCDH, L-3-hydroxyacyl-C 77.2 22 0.00076 31.9 11.3 96 157-267 16-134 (302)
408 2eez_A Alanine dehydrogenase; 77.1 11 0.00037 35.4 9.4 97 154-268 164-265 (369)
409 3pk0_A Short-chain dehydrogena 77.1 19 0.00066 31.4 10.7 82 154-239 8-96 (262)
410 3grc_A Sensor protein, kinase; 76.9 22 0.00074 26.9 10.9 82 179-270 7-88 (140)
411 3pi7_A NADH oxidoreductase; gr 76.9 4.6 0.00016 37.2 6.7 91 157-269 166-263 (349)
412 3o26_A Salutaridine reductase; 76.4 7.3 0.00025 34.4 7.7 82 155-240 11-100 (311)
413 1xa0_A Putative NADPH dependen 76.2 2.3 7.9E-05 38.8 4.4 93 155-269 148-246 (328)
414 1jw9_B Molybdopterin biosynthe 76.2 3.8 0.00013 36.4 5.7 74 155-238 30-128 (249)
415 1iy8_A Levodione reductase; ox 76.2 29 0.001 30.1 11.6 83 154-239 11-100 (267)
416 3f1l_A Uncharacterized oxidore 76.2 17 0.00059 31.5 10.0 82 154-239 10-100 (252)
417 4fs3_A Enoyl-[acyl-carrier-pro 75.8 40 0.0014 29.4 15.1 85 153-240 3-95 (256)
418 3cg0_A Response regulator rece 75.8 21 0.00073 26.8 9.4 69 179-255 10-79 (140)
419 3gqv_A Enoyl reductase; medium 75.7 8 0.00027 36.0 8.1 94 154-269 163-263 (371)
420 3lte_A Response regulator; str 75.5 23 0.00078 26.4 10.7 82 179-270 7-88 (132)
421 4e12_A Diketoreductase; oxidor 75.5 21 0.00073 31.8 10.7 94 157-267 5-119 (283)
422 3eod_A Protein HNR; response r 75.2 23 0.00079 26.4 11.1 69 178-255 7-75 (130)
423 3imf_A Short chain dehydrogena 75.1 19 0.00064 31.4 9.9 81 154-239 4-91 (257)
424 2uyo_A Hypothetical protein ML 75.0 30 0.001 31.8 11.7 112 157-272 104-221 (310)
425 3eul_A Possible nitrate/nitrit 74.4 28 0.00094 26.9 10.1 82 179-270 16-97 (152)
426 3c85_A Putative glutathione-re 74.3 19 0.00065 29.5 9.3 96 155-270 38-140 (183)
427 3sx2_A Putative 3-ketoacyl-(ac 74.0 39 0.0013 29.5 11.9 82 154-240 11-111 (278)
428 3lua_A Response regulator rece 73.9 21 0.0007 27.1 8.9 68 179-255 5-75 (140)
429 2jah_A Clavulanic acid dehydro 73.9 38 0.0013 29.1 11.6 81 154-239 5-92 (247)
430 1yf3_A DNA adenine methylase; 73.8 1.9 6.6E-05 38.9 3.1 53 207-270 149-212 (259)
431 3gl9_A Response regulator; bet 73.7 25 0.00087 26.1 12.0 67 179-254 3-69 (122)
432 1yb1_A 17-beta-hydroxysteroid 73.7 23 0.00078 31.0 10.2 82 154-240 29-117 (272)
433 3fwz_A Inner membrane protein 73.7 31 0.0011 27.1 10.8 95 157-272 8-108 (140)
434 3ftp_A 3-oxoacyl-[acyl-carrier 73.6 26 0.00089 30.9 10.6 82 154-240 26-114 (270)
435 4da9_A Short-chain dehydrogena 73.6 24 0.00084 31.2 10.5 82 154-240 27-116 (280)
436 3rkr_A Short chain oxidoreduct 73.5 27 0.00092 30.4 10.6 82 154-240 27-115 (262)
437 3v8b_A Putative dehydrogenase, 73.5 27 0.00093 31.0 10.8 82 154-240 26-114 (283)
438 1zem_A Xylitol dehydrogenase; 73.5 34 0.0012 29.7 11.3 81 154-239 5-92 (262)
439 2qq5_A DHRS1, dehydrogenase/re 73.3 16 0.00053 31.8 9.0 81 154-239 3-91 (260)
440 3cz5_A Two-component response 73.2 30 0.001 26.7 10.6 69 179-255 6-75 (153)
441 2rjn_A Response regulator rece 73.2 30 0.001 26.7 10.6 79 179-269 8-86 (154)
442 2rhc_B Actinorhodin polyketide 73.2 40 0.0014 29.6 11.7 81 154-239 20-107 (277)
443 2cdc_A Glucose dehydrogenase g 73.0 7.4 0.00025 36.1 7.1 90 156-270 181-279 (366)
444 3cnb_A DNA-binding response re 73.0 27 0.00094 26.2 11.7 83 179-270 9-92 (143)
445 2zay_A Response regulator rece 73.0 14 0.00049 28.3 7.8 67 179-254 9-75 (147)
446 3t7c_A Carveol dehydrogenase; 72.9 40 0.0014 30.0 11.8 81 154-239 26-125 (299)
447 1tmy_A CHEY protein, TMY; chem 72.8 25 0.00086 25.7 9.2 68 180-255 4-71 (120)
448 4a0s_A Octenoyl-COA reductase/ 72.8 13 0.00044 35.4 8.9 46 154-205 219-267 (447)
449 3hv2_A Response regulator/HD d 72.7 31 0.0011 26.7 10.4 80 179-270 15-94 (153)
450 3hdg_A Uncharacterized protein 72.6 28 0.00096 26.2 9.6 78 180-269 9-86 (137)
451 3to5_A CHEY homolog; alpha(5)b 72.3 35 0.0012 27.1 10.5 83 180-270 14-96 (134)
452 3sju_A Keto reductase; short-c 72.3 34 0.0012 30.2 11.1 81 155-240 23-110 (279)
453 3cg4_A Response regulator rece 72.2 29 0.00099 26.2 12.4 82 179-270 8-89 (142)
454 3pxx_A Carveol dehydrogenase; 72.1 44 0.0015 29.1 11.8 82 154-240 8-108 (287)
455 3t6k_A Response regulator rece 71.9 30 0.001 26.3 11.1 68 179-255 5-72 (136)
456 3krt_A Crotonyl COA reductase; 71.6 5.7 0.0002 38.2 6.1 42 154-197 227-271 (456)
457 3rd5_A Mypaa.01249.C; ssgcid, 71.2 20 0.00067 31.8 9.2 77 154-239 14-94 (291)
458 4fgs_A Probable dehydrogenase 71.1 34 0.0012 30.8 10.9 79 154-239 27-111 (273)
459 1p6q_A CHEY2; chemotaxis, sign 71.0 29 0.001 25.7 9.1 67 180-254 8-74 (129)
460 2j48_A Two-component sensor ki 70.9 26 0.00088 25.0 10.6 67 180-255 3-69 (119)
461 3rih_A Short chain dehydrogena 70.8 12 0.00039 33.8 7.7 82 154-239 39-127 (293)
462 4eso_A Putative oxidoreductase 70.8 23 0.00077 30.9 9.4 79 154-240 6-91 (255)
463 3pgx_A Carveol dehydrogenase; 70.6 43 0.0015 29.3 11.4 82 154-240 13-114 (280)
464 1pzg_A LDH, lactate dehydrogen 70.5 63 0.0021 29.7 12.8 101 156-271 9-134 (331)
465 3r1i_A Short-chain type dehydr 70.4 24 0.00081 31.2 9.6 82 154-240 30-118 (276)
466 1ae1_A Tropinone reductase-I; 70.0 37 0.0013 29.6 10.8 81 154-239 19-107 (273)
467 3ai3_A NADPH-sorbose reductase 70.0 53 0.0018 28.3 11.9 81 154-239 5-93 (263)
468 3uve_A Carveol dehydrogenase ( 69.8 50 0.0017 28.9 11.6 82 154-240 9-113 (286)
469 3ppi_A 3-hydroxyacyl-COA dehyd 69.7 21 0.00073 31.3 9.1 76 154-238 28-110 (281)
470 3nhm_A Response regulator; pro 69.4 32 0.0011 25.6 11.3 67 179-255 5-71 (133)
471 3f9i_A 3-oxoacyl-[acyl-carrier 69.4 29 0.001 29.6 9.7 78 154-240 12-93 (249)
472 2zat_A Dehydrogenase/reductase 69.2 50 0.0017 28.4 11.3 81 154-239 12-99 (260)
473 1xu9_A Corticosteroid 11-beta- 69.2 14 0.00048 32.6 7.8 80 155-238 27-113 (286)
474 4ibo_A Gluconate dehydrogenase 69.0 11 0.00039 33.3 7.1 82 154-240 24-112 (271)
475 3tsc_A Putative oxidoreductase 68.8 53 0.0018 28.7 11.5 82 154-240 9-110 (277)
476 3rku_A Oxidoreductase YMR226C; 68.8 28 0.00095 31.1 9.8 83 155-239 32-123 (287)
477 4egf_A L-xylulose reductase; s 68.6 38 0.0013 29.5 10.5 81 154-239 18-106 (266)
478 3k6j_A Protein F01G10.3, confi 68.6 22 0.00075 34.8 9.5 99 157-270 55-167 (460)
479 3n74_A 3-ketoacyl-(acyl-carrie 68.3 57 0.0019 28.0 11.6 79 154-240 7-92 (261)
480 2cf5_A Atccad5, CAD, cinnamyl 68.1 15 0.00052 33.8 8.0 92 155-269 180-275 (357)
481 3tfo_A Putative 3-oxoacyl-(acy 68.1 35 0.0012 30.1 10.2 80 155-239 3-89 (264)
482 3cxt_A Dehydrogenase with diff 68.0 49 0.0017 29.4 11.3 81 154-239 32-119 (291)
483 1pjc_A Protein (L-alanine dehy 67.8 50 0.0017 30.6 11.6 93 154-268 165-266 (361)
484 2vhw_A Alanine dehydrogenase; 67.4 21 0.00071 33.6 8.9 94 154-269 166-268 (377)
485 1vl8_A Gluconate 5-dehydrogena 67.4 54 0.0018 28.6 11.2 82 154-240 19-108 (267)
486 2b4q_A Rhamnolipids biosynthes 67.4 16 0.00053 32.4 7.7 80 154-239 27-113 (276)
487 4dry_A 3-oxoacyl-[acyl-carrier 67.3 28 0.00097 30.8 9.4 82 154-239 31-119 (281)
488 2qrv_B DNA (cytosine-5)-methyl 67.2 9.1 0.00031 34.2 5.9 106 156-292 33-160 (230)
489 3gvc_A Oxidoreductase, probabl 67.1 37 0.0013 30.0 10.2 79 154-240 27-112 (277)
490 3guy_A Short-chain dehydrogena 67.0 20 0.00069 30.4 8.1 75 158-240 3-81 (230)
491 3gg2_A Sugar dehydrogenase, UD 66.9 27 0.00092 33.8 9.8 95 158-269 4-122 (450)
492 3h8v_A Ubiquitin-like modifier 66.7 8.8 0.0003 35.3 6.0 61 154-215 34-114 (292)
493 1xkq_A Short-chain reductase f 66.7 43 0.0015 29.3 10.5 83 154-239 4-94 (280)
494 3rqi_A Response regulator prot 66.5 50 0.0017 26.6 10.6 80 179-270 8-87 (184)
495 3rwb_A TPLDH, pyridoxal 4-dehy 66.4 35 0.0012 29.4 9.7 79 154-240 4-89 (247)
496 4e6p_A Probable sorbitol dehyd 66.0 33 0.0011 29.7 9.4 79 154-240 6-91 (259)
497 1k66_A Phytochrome response re 65.9 40 0.0014 25.4 11.2 74 179-254 7-85 (149)
498 2y0c_A BCEC, UDP-glucose dehyd 65.7 22 0.00076 34.7 9.0 95 156-267 8-126 (478)
499 1zkd_A DUF185; NESG, RPR58, st 65.5 22 0.00074 34.1 8.6 43 156-199 81-131 (387)
500 3ilh_A Two component response 65.3 41 0.0014 25.3 9.9 90 179-270 10-100 (146)
No 1
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.6e-30 Score=221.59 Aligned_cols=185 Identities=26% Similarity=0.443 Sum_probs=157.4
Q ss_pred ceEEEEeeeecceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeC
Q 021116 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (317)
Q Consensus 107 ~il~ii~G~~~G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi 186 (317)
+|+||++|+|+|+++.++. ..+||+++.+++.+++++.... ..++.+|||+|||+|.++++++++|+.+|+++|+
T Consensus 1 ~m~rii~g~~~g~~l~~~~-~~~rp~~~~~~~~l~~~l~~~~----~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~ 75 (189)
T 3p9n_A 1 SMTRIIGGVAGGRRIAVPP-RGTRPTTDRVRESLFNIVTARR----DLTGLAVLDLYAGSGALGLEALSRGAASVLFVES 75 (189)
T ss_dssp CEEECCSSTTTTCEEECCS-CCC---CHHHHHHHHHHHHHHS----CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEEC
T ss_pred CceEEEeeccCCcEecCCC-CCCccCcHHHHHHHHHHHHhcc----CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEEC
Confidence 4789999999999999998 7789999999999999997631 1367899999999999999988888889999999
Q ss_pred CHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC--ccHHHHHHHHHHcCCcCCCeE
Q 021116 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA--VDYEVLMAQISKSALVGKDSF 264 (317)
Q Consensus 187 n~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~--~~~~~~l~~L~~~~lLkpgG~ 264 (317)
|+.++ +.|++|++.+++ ++++++++|+.++.... ..++||+|++||||.. ..+.+.++.+...++|+|||+
T Consensus 76 ~~~~~-~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 76 DQRSA-AVIARNIEALGL-SGATLRRGAVAAVVAAG-----TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp CHHHH-HHHHHHHHHHTC-SCEEEEESCHHHHHHHC-----CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred CHHHH-HHHHHHHHHcCC-CceEEEEccHHHHHhhc-----cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 99999 999999999998 56999999999886543 2478999999999986 356777777766669999999
Q ss_pred EEEEeCCCCCccccCCCeEEEEEeecCceEEEEEeechh
Q 021116 265 IVVEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPDWA 303 (317)
Q Consensus 265 ivv~~~~~~~l~~~~~~~~~~~~r~yG~~~l~~~~p~~~ 303 (317)
+++++.....+.....+|...+++.||.+.+.||++.++
T Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~yg~~~~~~~~~~~~ 187 (189)
T 3p9n_A 149 AVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFA 187 (189)
T ss_dssp EEEEEETTSCCCCCCTTEEECCCEEETTEEEEEEEEC--
T ss_pred EEEEecCCCCCccCCCceEEEEEcccCcEEEEEeccccc
Confidence 999999887777777889999999999999999999765
No 2
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.96 E-value=2.7e-28 Score=215.83 Aligned_cols=182 Identities=23% Similarity=0.387 Sum_probs=153.0
Q ss_pred ceEEEEeeeecceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeC
Q 021116 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (317)
Q Consensus 107 ~il~ii~G~~~G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi 186 (317)
..+++++|+|+|+++.++.+..+||+++.+++.+++++... .++.+|||+|||+|.++++++++|+.+|+++|+
T Consensus 12 ~~~~ii~g~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~------~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~ 85 (202)
T 2fpo_A 12 GQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV------IVDAQCLDCFAGSGALGLEALSRYAAGATLIEM 85 (202)
T ss_dssp CEEECCSGGGTTCEEECCCC------CHHHHHHHHHHHHHH------HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECS
T ss_pred ceEEEEEEEEcCcEecCCCCCCCCCCHHHHHHHHHHHHHhh------cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEEC
Confidence 35789999999999999998889999999999999998752 257899999999999999988888779999999
Q ss_pred CHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEE
Q 021116 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIV 266 (317)
Q Consensus 187 n~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~iv 266 (317)
|+.++ +.|++|++.+++ ++++++++|+.+++.. ..++||+|++||||......+.++.+.+.++|+|||+++
T Consensus 86 s~~~l-~~a~~~~~~~~~-~~v~~~~~D~~~~~~~------~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~ 157 (202)
T 2fpo_A 86 DRAVS-QQLIKNLATLKA-GNARVVNSNAMSFLAQ------KGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIY 157 (202)
T ss_dssp CHHHH-HHHHHHHHHTTC-CSEEEECSCHHHHHSS------CCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHH-HHHHHHHHHcCC-CcEEEEECCHHHHHhh------cCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEE
Confidence 99999 999999999998 5699999999886532 246899999999998777888888887667899999999
Q ss_pred EEeCCCCCccccCCCeEEEEEeecCceEEEEEeech
Q 021116 267 VEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPDW 302 (317)
Q Consensus 267 v~~~~~~~l~~~~~~~~~~~~r~yG~~~l~~~~p~~ 302 (317)
+++.....+.....+|.+.+++.||.+.+.||++.-
T Consensus 158 i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 193 (202)
T 2fpo_A 158 VESEVENGLPTVPANWSLHREKVAGQVAYRLYQREA 193 (202)
T ss_dssp EEEEGGGCSCCCCTTEEEEEEEEETTEEEEEEEECC
T ss_pred EEECCCccccccCCcceEEeeeccCCEEEEEEEECC
Confidence 999877776655678999999999999999997643
No 3
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.96 E-value=2.3e-28 Score=216.10 Aligned_cols=181 Identities=25% Similarity=0.355 Sum_probs=148.1
Q ss_pred eEEEEeeeecceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCC
Q 021116 108 LLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMD 187 (317)
Q Consensus 108 il~ii~G~~~G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin 187 (317)
.+++++|+|+|+++.++.+..+||+++.+++.+++++... .++.+|||+|||+|.++++++++|+.+|+++|+|
T Consensus 12 ~~~ii~G~~~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~------~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s 85 (201)
T 2ift_A 12 EVRIIAGLWRGRKLPVLNSEGLRPTGDRVKETLFNWLMPY------IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELD 85 (201)
T ss_dssp EEECCSSTTTTCEEECC---------CHHHHHHHHHHHHH------HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSC
T ss_pred ceEEEEeeeCCcEecCCCCCCcCcCHHHHHHHHHHHHHHh------cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECC
Confidence 3688899999999999988888999999999999998752 2578999999999999999888887789999999
Q ss_pred HHHHHHHHHHhHHHhCCC-CceEEEEecHHHHHHHHhhhcCCCCC-ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEE
Q 021116 188 PWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERAEQFVGKDGP-FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFI 265 (317)
Q Consensus 188 ~~al~~~ar~N~~~~gl~-~~v~ii~gD~~~~l~~~~~~~~~~~~-fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~i 265 (317)
+.++ +.|++|++.+++. ++++++++|+.+++... ..++ ||+|++||||......+.++.+.+.++|+|||++
T Consensus 86 ~~~l-~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l 159 (201)
T 2ift_A 86 KTVA-NQLKKNLQTLKCSSEQAEVINQSSLDFLKQP-----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALI 159 (201)
T ss_dssp HHHH-HHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHH-HHHHHHHHHhCCCccceEEEECCHHHHHHhh-----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEE
Confidence 9999 9999999999984 56999999998764211 1367 9999999998877778888888656789999999
Q ss_pred EEEeCCCCCccccCCCeEEEEEeecCceEEEEEeec
Q 021116 266 VVEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPD 301 (317)
Q Consensus 266 vv~~~~~~~l~~~~~~~~~~~~r~yG~~~l~~~~p~ 301 (317)
++++.... +.+...+|.++++++||.+.+.+|.+.
T Consensus 160 ~i~~~~~~-~~~~~~~~~~~~~~~yG~~~~~~~~~~ 194 (201)
T 2ift_A 160 YVETEKDK-PLITPENWTLLKEKTTGIVSYRLYQNL 194 (201)
T ss_dssp EEEEESSS-CCCCCTTEEEEEEEEETTEEEEEEEEC
T ss_pred EEEECCCC-CccccchhHHHHHHhcCCEEEEEEecc
Confidence 99988776 555667899999999999999999875
No 4
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.96 E-value=5.9e-28 Score=207.35 Aligned_cols=185 Identities=25% Similarity=0.417 Sum_probs=158.9
Q ss_pred ceEEEEeeeecceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeC
Q 021116 107 RLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (317)
Q Consensus 107 ~il~ii~G~~~G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi 186 (317)
++++|++|+|+|+++..+.+..+||+++.+.+.+++.+... .++.+|||+|||+|.+++++++.+..+|+++|+
T Consensus 2 ~~~~i~~g~~~~~~~~~~~~~~~rp~~~~~~~~~~~~l~~~------~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~ 75 (187)
T 2fhp_A 2 NAMRVISGEYGGRRLKALDGDNTRPTTDKVKESIFNMIGPY------FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEK 75 (187)
T ss_dssp -CCBCCSSTTTTCBCCCCCCCSSCCCCHHHHHHHHHHHCSC------CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEES
T ss_pred CceEEeeccccCccccCCCCCCcCcCHHHHHHHHHHHHHhh------cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEEC
Confidence 46789999999999999998889999999999999998542 367899999999999999988888778999999
Q ss_pred CHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEE
Q 021116 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIV 266 (317)
Q Consensus 187 n~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~iv 266 (317)
++.++ +.|++|++.+++.++++++++|+.+++.... ...++||+|++||||......+.++.+...++|+|||+++
T Consensus 76 ~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~ 151 (187)
T 2fhp_A 76 NFAAL-KVIKENIAITKEPEKFEVRKMDANRALEQFY---EEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIV 151 (187)
T ss_dssp CHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHHHHHH---HTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHH-HHHHHHHHHhCCCcceEEEECcHHHHHHHHH---hcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEE
Confidence 99999 9999999999987779999999988764321 1246899999999987667777888776668999999999
Q ss_pred EEeCCCCCccccCCCeEEEEEeecCceEEEEEeec
Q 021116 267 VEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGPD 301 (317)
Q Consensus 267 v~~~~~~~l~~~~~~~~~~~~r~yG~~~l~~~~p~ 301 (317)
++++....+.....+|...+++.||.+.+.+|++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 186 (187)
T 2fhp_A 152 CETDKTVKLPETIGTLKKTRETVYGITQVTIYRQE 186 (187)
T ss_dssp EEEETTCCCCSEETTEEEEEEEEETTEEEEEEEC-
T ss_pred EEeCCcccccccccchhhhhhhccCceEEEEEEec
Confidence 99988877766567899999999999999999863
No 5
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.93 E-value=3.1e-25 Score=189.97 Aligned_cols=170 Identities=24% Similarity=0.387 Sum_probs=132.1
Q ss_pred EEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhH
Q 021116 120 KLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNL 199 (317)
Q Consensus 120 ~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~ 199 (317)
+|.+|++..+||+++.+++.+++.+... .++.+|||+|||+|.+++.+++++..+|+++|+|+.++ +.|++|+
T Consensus 2 ~l~~p~~~~~rp~~~~~~~~~~~~l~~~------~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~ 74 (177)
T 2esr_A 2 SLKTLDGKITRPTSDKVRGAIFNMIGPY------FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQ-AIIQDNI 74 (177)
T ss_dssp ----------------CHHHHHHHHCSC------CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHH-HHHHHHH
T ss_pred cccCCCCCCCCcCHHHHHHHHHHHHHhh------cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHH
Confidence 4667888889999999999999998632 46789999999999999999888777899999999999 9999999
Q ss_pred HHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCccccC
Q 021116 200 EWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDMLDTC 279 (317)
Q Consensus 200 ~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~~~ 279 (317)
+.+++.++++++.+|+.+++... .+.||+|++||||.....++.++.+.+.++|+|||++++++.....+.+..
T Consensus 75 ~~~~~~~~~~~~~~d~~~~~~~~------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~~~~~ 148 (177)
T 2esr_A 75 IMTKAENRFTLLKMEAERAIDCL------TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVLLPKEI 148 (177)
T ss_dssp HTTTCGGGEEEECSCHHHHHHHB------CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCCCCSEE
T ss_pred HHcCCCCceEEEECcHHHhHHhh------cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcccccccc
Confidence 99998777999999999876443 357999999999865566777777765579999999999999887776666
Q ss_pred CCeEEEEEeecCceEEEEEeech
Q 021116 280 GCLVKIKDRRFGRTHLAIYGPDW 302 (317)
Q Consensus 280 ~~~~~~~~r~yG~~~l~~~~p~~ 302 (317)
.+|...+++.||.+.+.++....
T Consensus 149 ~~~~~~~~~~yg~~~~~~~~~~~ 171 (177)
T 2esr_A 149 ATLGIWKEKIYGISKVTVYVNEG 171 (177)
T ss_dssp TTEEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEeeecCcEEEEEEEecc
Confidence 78999999999999999997654
No 6
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.92 E-value=2.6e-24 Score=181.68 Aligned_cols=169 Identities=33% Similarity=0.533 Sum_probs=141.8
Q ss_pred eEEEEeeeecceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCC-CCCeEEEECCCcchHHHHHHHcCCCEEEEEeC
Q 021116 108 LLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASL-RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (317)
Q Consensus 108 il~ii~G~~~G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~-~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi 186 (317)
+++|++|+|+|+++..+.+ +||+.+.+.+.+++.+... . ++.+|||+|||+|.+++.+++.|.. |+++|+
T Consensus 1 ~~~i~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~ 71 (171)
T 1ws6_A 1 VVRILGGKARGVALKVPAS--ARPSPVRLRKALFDYLRLR------YPRRGRFLDPFAGSGAVGLEAASEGWE-AVLVEK 71 (171)
T ss_dssp CEECCSGGGTTCEECCCTT--CCCCCHHHHHHHHHHHHHH------CTTCCEEEEETCSSCHHHHHHHHTTCE-EEEECC
T ss_pred CceEeecccCCeEecCCCC--CCCCHHHHHHHHHHHHHhh------ccCCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeC
Confidence 5789999999999999988 8999999999999998753 2 5789999999999999999888865 999999
Q ss_pred CHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEE
Q 021116 187 DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIV 266 (317)
Q Consensus 187 n~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~iv 266 (317)
|+.++ +.|++|++.+++ +++++++|+.+++.... ...++||+|++||||. ...++.++.+.+.++|+|||+++
T Consensus 72 ~~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~---~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~ 144 (171)
T 1ws6_A 72 DPEAV-RLLKENVRRTGL--GARVVALPVEVFLPEAK---AQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYV 144 (171)
T ss_dssp CHHHH-HHHHHHHHHHTC--CCEEECSCHHHHHHHHH---HTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEE
T ss_pred CHHHH-HHHHHHHHHcCC--ceEEEeccHHHHHHhhh---ccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEE
Confidence 99999 999999999987 58999999988754432 1124799999999997 66666777665346899999999
Q ss_pred EEeCCCCCccccCCCeEEEEEeecCceEEEEEe
Q 021116 267 VEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYG 299 (317)
Q Consensus 267 v~~~~~~~l~~~~~~~~~~~~r~yG~~~l~~~~ 299 (317)
+++.....+. ..+++.||.+.+.||+
T Consensus 145 ~~~~~~~~~~-------~~~~~~y~~~~~~~~~ 170 (171)
T 1ws6_A 145 LQHPKDLYLP-------LGERRVYGENALTLVE 170 (171)
T ss_dssp EEEETTSCCT-------TSEEEEETTEEEEEEE
T ss_pred EEeCCccCCc-------hhhhhccCcEEEEEEE
Confidence 9998766543 3467899999999986
No 7
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.74 E-value=4.9e-17 Score=151.64 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=113.0
Q ss_pred eecceEEecCCCC-CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHH
Q 021116 115 KARRKKLLSPKGM-DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSN 193 (317)
Q Consensus 115 ~~~G~~l~~p~~~-~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~ 193 (317)
.|.|..+.+..+. ..||.++.+.+.+++.+... ++.+|||+|||+|.+++.++..+..+|+++|+|+.++ +
T Consensus 89 ~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~-------~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al-~ 160 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFVPRPETEELVELALELIRKY-------GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAV-E 160 (284)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHH-------TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHH-H
T ss_pred EECCeEEEeCCCceecChhHHHHHHHHHHHhccc-------CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHH-H
Confidence 5778888876655 57999999999998887642 4679999999999999988776445899999999999 9
Q ss_pred HHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc---cEEEECCCCCCcc--------HH------------HHH
Q 021116 194 VLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF---DYMSVTPPYTAVD--------YE------------VLM 250 (317)
Q Consensus 194 ~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f---DlV~~dPPy~~~~--------~~------------~~l 250 (317)
.|++|++.+|+.++++++++|+.+.+. ++| |+|++||||.... ++ ..+
T Consensus 161 ~A~~n~~~~~l~~~v~~~~~D~~~~~~---------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~ 231 (284)
T 1nv8_A 161 IARKNAERHGVSDRFFVRKGEFLEPFK---------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFY 231 (284)
T ss_dssp HHHHHHHHTTCTTSEEEEESSTTGGGG---------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHH
T ss_pred HHHHHHHHcCCCCceEEEECcchhhcc---------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHH
Confidence 999999999998889999999987531 468 9999999996421 11 344
Q ss_pred HHHHHcCCcCCCeEEEEEeCCCC
Q 021116 251 AQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 251 ~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+.+.. +.|+|||++++++...+
T Consensus 232 ~~i~~-~~l~pgG~l~~e~~~~q 253 (284)
T 1nv8_A 232 REFFG-RYDTSGKIVLMEIGEDQ 253 (284)
T ss_dssp HHHHH-HCCCTTCEEEEECCTTC
T ss_pred HHHHH-hcCCCCCEEEEEECchH
Confidence 44440 37899999999988654
No 8
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.72 E-value=7.5e-17 Score=156.52 Aligned_cols=114 Identities=16% Similarity=0.204 Sum_probs=92.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCC-ceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~-~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||||.+++.++++|+.+|++||+++.++ +.|++|++.||+.+ +++++++|+.+++.... ....+||
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al-~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~---~~~~~fD 287 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSR-ALSLAHFEANHLDMANHQLVVMDVFDYFKYAR---RHHLTYD 287 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHH-HHHHHHHHHTTCCCTTEEEEESCHHHHHHHHH---HTTCCEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHH---HhCCCcc
Confidence 4789999999999999999988888999999999999 99999999999975 79999999999876432 1235899
Q ss_pred EEEECCCCCC---c---c----HHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 234 YMSVTPPYTA---V---D----YEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 234 lV~~dPPy~~---~---~----~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
+|++|||+.. . . +.+++..+. ++|+|||++++++...+.
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~--~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGL--EILSENGLIIASTNAANM 336 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHH--HTEEEEEEEEEEECCTTS
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHH--HhcCCCcEEEEEeCCCcC
Confidence 9999999842 1 1 233333333 589999999999886643
No 9
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.71 E-value=3e-16 Score=149.68 Aligned_cols=132 Identities=17% Similarity=0.198 Sum_probs=100.6
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCC-ce
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-VS 208 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~-~v 208 (317)
.|.....+..+.+.+... .++.+|||+|||+|.+++.+++.|+ +|++||+|+.++ +.|++|++.+++.+ ++
T Consensus 134 f~dq~~~~~~l~~~~~~~------~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al-~~a~~n~~~~gl~~~~v 205 (332)
T 2igt_A 134 FPEQIVHWEWLKNAVETA------DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAI-GWAKENQVLAGLEQAPI 205 (332)
T ss_dssp CGGGHHHHHHHHHHHHHS------SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHHHHHTCTTSCE
T ss_pred chHHHHHHHHHHHHHHhc------CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHHcCCCccce
Confidence 455566666666665421 2467999999999999999999887 899999999999 99999999999976 59
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC-c----------cHHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA-V----------DYEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~-~----------~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
+++++|+.+++.... ....+||+|++||||.. . .+.++++.+. ++|+|||++++++.....
T Consensus 206 ~~i~~D~~~~l~~~~---~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~--~~LkpgG~lli~~~~~~~ 277 (332)
T 2igt_A 206 RWICEDAMKFIQREE---RRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICR--EILSPKALGLVLTAYSIR 277 (332)
T ss_dssp EEECSCHHHHHHHHH---HHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHH--HTBCTTCCEEEEEECCTT
T ss_pred EEEECcHHHHHHHHH---hcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHH--HhcCcCcEEEEEECCCCC
Confidence 999999999875421 01368999999999632 1 1344454443 589999998887765543
No 10
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.70 E-value=4.5e-17 Score=148.56 Aligned_cols=137 Identities=15% Similarity=0.181 Sum_probs=101.8
Q ss_pred ceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCC-CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Q 021116 118 RKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASL-RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLI 196 (317)
Q Consensus 118 G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~-~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar 196 (317)
+.++..+.+ .+++.++.+.-+ .++.. . ++.+|||+|||+|.+++.++.++..+|+++|+++.++ +.|+
T Consensus 21 ~~~i~q~~~-~~~~~~d~~ll~--~~~~~-------~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~-~~a~ 89 (259)
T 3lpm_A 21 NLRIIQSPS-VFSFSIDAVLLA--KFSYL-------PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLA-DMAK 89 (259)
T ss_dssp TEEEEEBTT-TBCCCHHHHHHH--HHCCC-------CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHH-HHHH
T ss_pred CEEEEeCCC-CccCcHHHHHHH--HHhcC-------CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHH-HHHH
Confidence 445555554 447787754322 22221 3 5789999999999999998888766899999999999 9999
Q ss_pred HhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc---------------------cHHHHHHHHHH
Q 021116 197 PNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV---------------------DYEVLMAQISK 255 (317)
Q Consensus 197 ~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~---------------------~~~~~l~~L~~ 255 (317)
+|++.+++.++++++++|+.++...+ ..++||+|++||||... .++..++.+.
T Consensus 90 ~n~~~~~~~~~v~~~~~D~~~~~~~~-----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~- 163 (259)
T 3lpm_A 90 RSVAYNQLEDQIEIIEYDLKKITDLI-----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAA- 163 (259)
T ss_dssp HHHHHTTCTTTEEEECSCGGGGGGTS-----CTTCEEEEEECCCC-----------------------HHHHHHHHHHH-
T ss_pred HHHHHCCCcccEEEEECcHHHhhhhh-----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHH-
Confidence 99999999888999999998875321 24789999999999542 1233444443
Q ss_pred cCCcCCCeEEEEEeCCC
Q 021116 256 SALVGKDSFIVVEYPLR 272 (317)
Q Consensus 256 ~~lLkpgG~ivv~~~~~ 272 (317)
++|+|||++++.++..
T Consensus 164 -~~LkpgG~l~~~~~~~ 179 (259)
T 3lpm_A 164 -SLLKQGGKANFVHRPE 179 (259)
T ss_dssp -HHEEEEEEEEEEECTT
T ss_pred -HHccCCcEEEEEEcHH
Confidence 5899999999987643
No 11
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.69 E-value=3.8e-17 Score=159.55 Aligned_cols=124 Identities=16% Similarity=0.247 Sum_probs=96.0
Q ss_pred CCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCc-eEEEEecHHHHHH-HHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV-SSIHTVRVETFLE-RAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~-v~ii~gD~~~~l~-~~~~~~~~~~ 230 (317)
++.+|||+|||||.++++++++ |+.+|+++|+|+.++ +.+++|++.||++++ ++++++|+.+++. .. .+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av-~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~ 124 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAI-EIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GF 124 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHH-HHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SS
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CC
Confidence 4789999999999999999884 667899999999999 999999999999877 9999999999875 43 35
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCccccCCCeEEEEEeecCce
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDMLDTCGCLVKIKDRRFGRT 293 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~~~~~~~~~~~r~yG~~ 293 (317)
.||+|++|| |. ...+.++... +.|++||++++++. .+....+.+.....++||.+
T Consensus 125 ~fD~V~lDP-~g--~~~~~l~~a~--~~Lk~gGll~~t~t---~~~~l~g~~~~~~~rkYg~~ 179 (392)
T 3axs_A 125 GFDYVDLDP-FG--TPVPFIESVA--LSMKRGGILSLTAT---DTAPLSGTYPKTCMRRYMAR 179 (392)
T ss_dssp CEEEEEECC-SS--CCHHHHHHHH--HHEEEEEEEEEEEC---CHHHHTTSSHHHHHHHHSSB
T ss_pred CCcEEEECC-Cc--CHHHHHHHHH--HHhCCCCEEEEEec---chhhhccccHHHHHHHhCCc
Confidence 799999998 43 2344555544 26899999999994 23222233333344667765
No 12
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.68 E-value=1.4e-16 Score=149.02 Aligned_cols=103 Identities=15% Similarity=0.216 Sum_probs=86.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+|++|||+|||+|.+++.++++|+.+|+++|+||.++ +.+++|++.||++++++++++|+.++. ..+.||
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~-~~~~~N~~~N~v~~~v~~~~~D~~~~~--------~~~~~D 194 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLVENIHLNKVEDRMSAYNMDNRDFP--------GENIAD 194 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCTTTCC--------CCSCEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEeCcHHHhc--------cccCCC
Confidence 35899999999999999999999988999999999999 999999999999999999999998764 246899
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.|++|||+.... .++... ++|++||+|.+.+.
T Consensus 195 ~Vi~~~p~~~~~---~l~~a~--~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 195 RILMGYVVRTHE---FIPKAL--SIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEECCCSSGGG---GHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEECCCCcHHH---HHHHHH--HHcCCCCEEEEEee
Confidence 999999875422 232222 26899999976544
No 13
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.68 E-value=6.8e-16 Score=149.77 Aligned_cols=113 Identities=19% Similarity=0.267 Sum_probs=93.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC-CCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF-LDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.+++.++..|+.+|++||+|+.++ +.|++|++.||+ .++++++++|+.+++.... ....+||
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al-~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~---~~~~~fD 295 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEAL-DIARQNVELNKLDLSKAEFVRDDVFKLLRTYR---DRGEKFD 295 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHH---HTTCCEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHH---hcCCCCC
Confidence 5789999999999999999998888999999999999 999999999998 6579999999999875432 1136899
Q ss_pred EEEECCCCCC----------ccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 234 YMSVTPPYTA----------VDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 234 lV~~dPPy~~----------~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+|++|||+.. ..+.+.+..+. ++|+|||++++++....
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAI--QLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHH--HTEEEEEEEEEEECCTT
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHH--HhcCCCcEEEEEeCCCc
Confidence 9999999843 23455555544 48999999999887654
No 14
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.68 E-value=7.5e-16 Score=131.38 Aligned_cols=146 Identities=14% Similarity=0.172 Sum_probs=112.7
Q ss_pred EEEEeeeecceEEec--CCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeC
Q 021116 109 LQVLGGKARRKKLLS--PKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM 186 (317)
Q Consensus 109 l~ii~G~~~G~~l~~--p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi 186 (317)
++.+.+.|.|..+.. ..+.+..++.+...+.+++.+.. .++.+|||+|||+|.+++.++.. ..+|+++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~ 82 (194)
T 1dus_A 11 VKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVV-------DKDDDILDLGCGYGVIGIALADE-VKSTTMADI 82 (194)
T ss_dssp EEEEEEEETTEEEEEEEETTSTTTTSCCHHHHHHHHHCCC-------CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEES
T ss_pred ccEEeeecCCCceEEEeCCCcCCccccchHHHHHHHHccc-------CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEEC
Confidence 456688888886654 34444444455667777777643 36789999999999999988877 458999999
Q ss_pred CHHHHHHHHHHhHHHhCCCC-ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc--cHHHHHHHHHHcCCcCCCe
Q 021116 187 DPWVVSNVLIPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV--DYEVLMAQISKSALVGKDS 263 (317)
Q Consensus 187 n~~al~~~ar~N~~~~gl~~-~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~--~~~~~l~~L~~~~lLkpgG 263 (317)
++.++ +.+++|++.+++.+ +++++.+|+.+.. ..++||+|++++||... .....++.+. ++|+|||
T Consensus 83 ~~~~~-~~a~~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~~D~v~~~~~~~~~~~~~~~~l~~~~--~~L~~gG 151 (194)
T 1dus_A 83 NRRAI-KLAKENIKLNNLDNYDIRVVHSDLYENV--------KDRKYNKIITNPPIRAGKEVLHRIIEEGK--ELLKDNG 151 (194)
T ss_dssp CHHHH-HHHHHHHHHTTCTTSCEEEEECSTTTTC--------TTSCEEEEEECCCSTTCHHHHHHHHHHHH--HHEEEEE
T ss_pred CHHHH-HHHHHHHHHcCCCccceEEEECchhccc--------ccCCceEEEECCCcccchhHHHHHHHHHH--HHcCCCC
Confidence 99999 99999999998865 5999999987643 13689999999998752 3455666654 4899999
Q ss_pred EEEEEeCCCC
Q 021116 264 FIVVEYPLRT 273 (317)
Q Consensus 264 ~ivv~~~~~~ 273 (317)
++++......
T Consensus 152 ~l~~~~~~~~ 161 (194)
T 1dus_A 152 EIWVVIQTKQ 161 (194)
T ss_dssp EEEEEEESTH
T ss_pred EEEEEECCCC
Confidence 9999887653
No 15
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.67 E-value=4.9e-16 Score=150.89 Aligned_cols=125 Identities=16% Similarity=0.177 Sum_probs=101.6
Q ss_pred CCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHh--
Q 021116 126 GMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT-- 202 (317)
Q Consensus 126 ~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~-- 202 (317)
+.+++|.....+...+..+.. .++.+|||+|||||.++++++++ ++.+|+++|+|+.++ +.+++|++.|
T Consensus 25 ~~F~np~~~~nr~l~~~~l~~-------~~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av-~~a~~N~~~n~~ 96 (378)
T 2dul_A 25 PVFYNPRMALNRDIVVVLLNI-------LNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAY-ELMKRNVMLNFD 96 (378)
T ss_dssp CCCCCGGGHHHHHHHHHHHHH-------HCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHH-HHHHHHHHHHCC
T ss_pred CceeCCchHHHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHhcc
Confidence 567899998877776666654 25789999999999999998886 666899999999999 9999999999
Q ss_pred -------------CCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 203 -------------GFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 203 -------------gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+.+ ++++++|+.+++... ...||+|++|||+.. .+.++... +.|++||++++.+
T Consensus 97 ~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~~~~------~~~fD~I~lDP~~~~---~~~l~~a~--~~lk~gG~l~vt~ 164 (378)
T 2dul_A 97 GELRESKGRAILKGEKT-IVINHDDANRLMAER------HRYFHFIDLDPFGSP---MEFLDTAL--RSAKRRGILGVTA 164 (378)
T ss_dssp SCCEECSSEEEEESSSE-EEEEESCHHHHHHHS------TTCEEEEEECCSSCC---HHHHHHHH--HHEEEEEEEEEEE
T ss_pred cccccccccccccCCCc-eEEEcCcHHHHHHhc------cCCCCEEEeCCCCCH---HHHHHHHH--HhcCCCCEEEEEe
Confidence 8865 999999999887543 357999999997642 34555443 3689999999987
Q ss_pred C
Q 021116 270 P 270 (317)
Q Consensus 270 ~ 270 (317)
.
T Consensus 165 t 165 (378)
T 2dul_A 165 T 165 (378)
T ss_dssp C
T ss_pred e
Confidence 3
No 16
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.67 E-value=4.9e-16 Score=161.76 Aligned_cols=109 Identities=23% Similarity=0.307 Sum_probs=92.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCC-CceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~-~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++++|||+|||||.+++.++..|+.+|++||+|+.++ +.|++|++.||+. ++++++++|+.+++... .++||
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al-~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~------~~~fD 611 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYL-EWAERNLRLNGLTGRAHRLIQADCLAWLREA------NEQFD 611 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCSTTEEEEESCHHHHHHHC------CCCEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEEecCHHHHHHhc------CCCcc
Confidence 5789999999999999999998988899999999999 9999999999997 57999999999987653 47899
Q ss_pred EEEECCCCCCc------------cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVTPPYTAV------------DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~dPPy~~~------------~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+|++|||+... .+.+++..+. ++|+|||+++++++..
T Consensus 612 ~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~--~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 612 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK--RLLRAGGTIMFSNNKR 660 (703)
T ss_dssp EEEECCCSBC-------CCBHHHHHHHHHHHHH--HHEEEEEEEEEEECCT
T ss_pred EEEECCccccCCccchhHHHHHHHHHHHHHHHH--HhcCCCcEEEEEECCc
Confidence 99999997421 2344454443 5899999999999864
No 17
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.67 E-value=1.1e-15 Score=140.63 Aligned_cols=138 Identities=22% Similarity=0.229 Sum_probs=108.6
Q ss_pred eecceEEecCCCC-CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHH
Q 021116 115 KARRKKLLSPKGM-DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVS 192 (317)
Q Consensus 115 ~~~G~~l~~p~~~-~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~ 192 (317)
.|.|..+.+..+. ..||.++.+.+.+.+.+. .++.+|||+|||+|.+++.++.. +..+|+++|+++.++
T Consensus 76 ~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~--------~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l- 146 (276)
T 2b3t_A 76 EFWSLPLFVSPATLIPRPDTECLVEQALARLP--------EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAV- 146 (276)
T ss_dssp EETTEEEECCTTSCCCCTTHHHHHHHHHHHSC--------SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHH-
T ss_pred EECCceEEeCCCCcccCchHHHHHHHHHHhcc--------cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHH-
Confidence 5678888866555 469999988888877663 14679999999999999988754 456899999999999
Q ss_pred HHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc--------------------------cH
Q 021116 193 NVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV--------------------------DY 246 (317)
Q Consensus 193 ~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~--------------------------~~ 246 (317)
+.|++|++.+++. +++++++|+.+.+ ..++||+|++||||... .+
T Consensus 147 ~~a~~n~~~~~~~-~v~~~~~d~~~~~--------~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~ 217 (276)
T 2b3t_A 147 SLAQRNAQHLAIK-NIHILQSDWFSAL--------AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADI 217 (276)
T ss_dssp HHHHHHHHHHTCC-SEEEECCSTTGGG--------TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHH
T ss_pred HHHHHHHHHcCCC-ceEEEEcchhhhc--------ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHH
Confidence 9999999999986 5999999987653 13689999999999642 12
Q ss_pred HHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 247 EVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 247 ~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
..+++.+ .++|+|||+++++....
T Consensus 218 ~~~l~~~--~~~LkpgG~l~~~~~~~ 241 (276)
T 2b3t_A 218 VHIIEQS--RNALVSGGFLLLEHGWQ 241 (276)
T ss_dssp HHHHHHH--GGGEEEEEEEEEECCSS
T ss_pred HHHHHHH--HHhcCCCCEEEEEECch
Confidence 3333333 36899999999987654
No 18
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.66 E-value=7.8e-16 Score=146.87 Aligned_cols=141 Identities=15% Similarity=0.067 Sum_probs=106.7
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhHHHhCCCCc
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G--a~~V~aVDin~~al~~~ar~N~~~~gl~~~ 207 (317)
.|..+.++.++.+.+.. .++.+|||+|||+|.++++++..+ ..+|+++|+|+.++ +.|++|++.+|+. +
T Consensus 185 a~l~~~la~~l~~~~~~-------~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i-~~a~~n~~~~g~~-~ 255 (354)
T 3tma_A 185 GSLTPVLAQALLRLADA-------RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRL-GLAREAALASGLS-W 255 (354)
T ss_dssp CSCCHHHHHHHHHHTTC-------CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHH-HHHHHHHHHTTCT-T
T ss_pred CCcCHHHHHHHHHHhCC-------CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHH-HHHHHHHHHcCCC-c
Confidence 45667777777776643 357899999999999999998864 25799999999999 9999999999997 6
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---------HHHHHHHHHHcCCcCCCeEEEEEeCCCCCcc--
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---------YEVLMAQISKSALVGKDSFIVVEYPLRTDML-- 276 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---------~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~-- 276 (317)
++++++|+.++.. ....||+|++||||+... |..+++.+. ++|+|||.+++.++....+.
T Consensus 256 i~~~~~D~~~~~~-------~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~--~~LkpgG~l~i~t~~~~~~~~~ 326 (354)
T 3tma_A 256 IRFLRADARHLPR-------FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGAL--ALLPPGGRVALLTLRPALLKRA 326 (354)
T ss_dssp CEEEECCGGGGGG-------TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHH--HTSCTTCEEEEEESCHHHHHHH
T ss_pred eEEEeCChhhCcc-------ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHH--HhcCCCcEEEEEeCCHHHHHHH
Confidence 9999999987632 235689999999997531 244555554 58999999999887542111
Q ss_pred ccCCCeEEEEEee
Q 021116 277 DTCGCLVKIKDRR 289 (317)
Q Consensus 277 ~~~~~~~~~~~r~ 289 (317)
.. .+|...+.+.
T Consensus 327 ~~-~g~~~~~~~~ 338 (354)
T 3tma_A 327 LP-PGFALRHARV 338 (354)
T ss_dssp CC-TTEEEEEEEE
T ss_pred hh-cCcEEEEEEE
Confidence 11 5677766655
No 19
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.64 E-value=1.3e-15 Score=147.58 Aligned_cols=112 Identities=21% Similarity=0.216 Sum_probs=90.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.++..|+.+|+++|+++.++ +.|++|++.+|+.++++++++|+.+++..+. ....+||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l-~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~---~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAI-ETAKENAKLNGVEDRMKFIVGSAFEEMEKLQ---KKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHH---HTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEECCHHHHHHHHH---hhCCCCCE
Confidence 5789999999999999999888888999999999999 9999999999997679999999998865431 12368999
Q ss_pred EEECCCCCCc----------cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 235 MSVTPPYTAV----------DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 235 V~~dPPy~~~----------~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|++|||+... .+.+++..+ .++|+|||++++.+...
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAG--LNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHH--HTTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHH--HHhcCCCcEEEEEECCC
Confidence 9999998532 133333333 36999999887766543
No 20
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=7.4e-16 Score=141.29 Aligned_cols=116 Identities=20% Similarity=0.195 Sum_probs=89.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHH---hCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEW---TGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~---~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
.++.+|||+|||+|.+++.++.++ ..+|++||+++.++ +.|++|++. +++.++++++++|+.++......-....
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~-~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMA-EFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHH-HHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 357899999999999999988875 35899999999999 999999999 8888789999999987743210000124
Q ss_pred CCccEEEECCCCCCc-------------------cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 230 GPFDYMSVTPPYTAV-------------------DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~-------------------~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
++||+|++||||... .++.+++.+. ++|+|||++++.++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTAS--AIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHH--HHEEEEEEEEEEECGG
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHH--HHcCCCCEEEEEEcHH
Confidence 689999999999753 1445555544 5899999999988754
No 21
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.63 E-value=1.5e-15 Score=140.71 Aligned_cols=103 Identities=15% Similarity=0.222 Sum_probs=86.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.++..|+.+|+++|+|+.++ +.|++|++.+++.++++++++|+.++.. ..+||+
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~-~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~fD~ 195 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIADR 195 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCccE
Confidence 4789999999999999999988876899999999999 9999999999998889999999987642 468999
Q ss_pred EEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 235 MSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 235 V~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|++|||+.. .+.++.+. ++|+|||++++....
T Consensus 196 Vi~~~p~~~---~~~l~~~~--~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 196 ILMGYVVRT---HEFIPKAL--SIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEECCCSSG---GGGHHHHH--HHEEEEEEEEEEEEE
T ss_pred EEECCchhH---HHHHHHHH--HHCCCCeEEEEEEee
Confidence 999999754 23344333 378999999886654
No 22
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.63 E-value=2.1e-16 Score=142.97 Aligned_cols=138 Identities=15% Similarity=0.117 Sum_probs=97.3
Q ss_pred CCCeEEEECCCcchHHHHHHHc---CCCEEEEEeCCHHHHHHHHHHhHHHh---CCCCc---------------------
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR---GCSEVHFVEMDPWVVSNVLIPNLEWT---GFLDV--------------------- 207 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~---Ga~~V~aVDin~~al~~~ar~N~~~~---gl~~~--------------------- 207 (317)
.+.+|||+|||+|.++++++.. +..+|+++|+|+.++ +.|++|+..+ ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPL-ELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHH-HHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHH-HHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4679999999999999998765 235799999999999 9999999877 55433
Q ss_pred ----eE-------------EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc----------HHHHHHHHHHcCCcC
Q 021116 208 ----SS-------------IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD----------YEVLMAQISKSALVG 260 (317)
Q Consensus 208 ----v~-------------ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~----------~~~~l~~L~~~~lLk 260 (317)
++ ++++|+.+...... . ....+||+|++||||.... +..+++.+. ++|+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~-~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~--~~Lk 205 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSA-V-LAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLA--SALP 205 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH-H-HTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHH--HHSC
T ss_pred hhhhhhhhccccccccccceeeccccccccccc-c-cCCCCceEEEeCCCeeccccccccccccHHHHHHHHHH--HhcC
Confidence 56 89999876532100 0 0124799999999986421 234555544 5899
Q ss_pred CCeEEEEEeCCCCCccccCCCeEEEEEeecCceEEEEEee
Q 021116 261 KDSFIVVEYPLRTDMLDTCGCLVKIKDRRFGRTHLAIYGP 300 (317)
Q Consensus 261 pgG~ivv~~~~~~~l~~~~~~~~~~~~r~yG~~~l~~~~p 300 (317)
|||++++...... .. ...+..+++..+|...+.+|+.
T Consensus 206 pgG~l~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 242 (250)
T 1o9g_A 206 AHAVIAVTDRSRK-IP--VAPVKALERLKIGTRSAVMVRA 242 (250)
T ss_dssp TTCEEEEEESSSC-CC--CTTSCCSEEEEETTEEEEEEEH
T ss_pred CCcEEEEeCcchh-cc--ccchhhHHHhhcCCccEEEEec
Confidence 9999998544332 22 1223334567889999988864
No 23
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.63 E-value=1.9e-15 Score=146.99 Aligned_cols=158 Identities=15% Similarity=0.140 Sum_probs=104.5
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-------------------------------
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC------------------------------- 178 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga------------------------------- 178 (317)
-|..+.++.++...... .++.+|||+|||||++.++|+..+.
T Consensus 177 Apl~e~lAa~ll~~~~~-------~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~ 249 (385)
T 3ldu_A 177 APIRETLAAGLIYLTPW-------KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAF 249 (385)
T ss_dssp CCCCHHHHHHHHHTSCC-------CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCC-------CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHH
Confidence 35566677666554432 3578999999999999999887643
Q ss_pred --------CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc-----
Q 021116 179 --------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD----- 245 (317)
Q Consensus 179 --------~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~----- 245 (317)
.+|+++|+|+.++ +.|++|++.+|+.+.+++.++|+.++. ...+||+|++||||+...
T Consensus 250 ~~~~~~~~~~V~GvDid~~ai-~~Ar~Na~~~gl~~~i~~~~~D~~~l~--------~~~~~D~Iv~NPPyg~rl~~~~~ 320 (385)
T 3ldu_A 250 NKIDNESKFKIYGYDIDEESI-DIARENAEIAGVDEYIEFNVGDATQFK--------SEDEFGFIITNPPYGERLEDKDS 320 (385)
T ss_dssp HHSCCSCCCCEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEECCGGGCC--------CSCBSCEEEECCCCCCSHHHHHH
T ss_pred HHhhccCCceEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChhhcC--------cCCCCcEEEECCCCcCccCCHHH
Confidence 3699999999999 999999999999878999999998753 135899999999998532
Q ss_pred HHHHHHHHHHcCCc--CCCeEEEEEeCCCCCccccCCCeEEEEE-eec-CceEEEEEeechhhhcc
Q 021116 246 YEVLMAQISKSALV--GKDSFIVVEYPLRTDMLDTCGCLVKIKD-RRF-GRTHLAIYGPDWAQKKR 307 (317)
Q Consensus 246 ~~~~l~~L~~~~lL--kpgG~ivv~~~~~~~l~~~~~~~~~~~~-r~y-G~~~l~~~~p~~~~~~~ 307 (317)
...+...+.. .| -+|+.+++-++... +... -+....+. +.| |..+..+|....+..+|
T Consensus 321 l~~ly~~lg~--~lk~~~g~~~~iit~~~~-l~~~-~g~~~~~~~~l~nG~l~~~~~~~~~~~~~~ 382 (385)
T 3ldu_A 321 VKQLYKELGY--AFRKLKNWSYYLITSYED-FEYE-FGQKADKKRKLYNGMLKTNFFQYPGPKPPR 382 (385)
T ss_dssp HHHHHHHHHH--HHHTSBSCEEEEEESCTT-HHHH-HTSCCSEEEEEEETTEEEEEEEECCCCCCC
T ss_pred HHHHHHHHHH--HHhhCCCCEEEEEECCHH-HHHh-hCCCcccceEEecCCEEEEEEEEECCCCCC
Confidence 2222322221 22 35777777666433 2211 12222222 223 45666666554444333
No 24
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.62 E-value=2e-15 Score=147.27 Aligned_cols=159 Identities=16% Similarity=0.171 Sum_probs=102.9
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-------------------------------
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC------------------------------- 178 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga------------------------------- 178 (317)
-|..+.++.++.....- .++..|||+|||||++.++|+..+.
T Consensus 183 Apl~e~lAa~ll~l~~~-------~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~ 255 (393)
T 3k0b_A 183 APIKETMAAALVLLTSW-------HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAE 255 (393)
T ss_dssp CSCCHHHHHHHHHHSCC-------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCC-------CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHH
Confidence 45677777777655432 3578999999999999999887543
Q ss_pred --------CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc-----
Q 021116 179 --------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD----- 245 (317)
Q Consensus 179 --------~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~----- 245 (317)
.+|+++|+|+.++ +.|++|++.+|+.++++++++|+.++. ...+||+|++||||+...
T Consensus 256 ~~~~~~~~~~V~GvDid~~al-~~Ar~Na~~~gl~~~I~~~~~D~~~~~--------~~~~fD~Iv~NPPYg~rl~~~~~ 326 (393)
T 3k0b_A 256 DLANYDQPLNIIGGDIDARLI-EIAKQNAVEAGLGDLITFRQLQVADFQ--------TEDEYGVVVANPPYGERLEDEEA 326 (393)
T ss_dssp HHCCTTCCCCEEEEESCHHHH-HHHHHHHHHTTCTTCSEEEECCGGGCC--------CCCCSCEEEECCCCCCSHHHHHH
T ss_pred HhhcccCCceEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChHhCC--------CCCCCCEEEECCCCccccCCchh
Confidence 2599999999999 999999999999888999999998753 135899999999997532
Q ss_pred HHHHHHHHHH-cCCcCCCeEEEEEeCCCCCccccCCCeEEEEE-eec-CceEEEEEeechhhhcc
Q 021116 246 YEVLMAQISK-SALVGKDSFIVVEYPLRTDMLDTCGCLVKIKD-RRF-GRTHLAIYGPDWAQKKR 307 (317)
Q Consensus 246 ~~~~l~~L~~-~~lLkpgG~ivv~~~~~~~l~~~~~~~~~~~~-r~y-G~~~l~~~~p~~~~~~~ 307 (317)
...+...+.+ .+. -+|+.+++-++.. .+... -++...+. +-| |..+..+|....+.++|
T Consensus 327 l~~ly~~lg~~lk~-~~g~~~~iit~~~-~l~~~-~g~~~~~~~~l~nG~l~~~~~~~~~~~~~~ 388 (393)
T 3k0b_A 327 VRQLYREMGIVYKR-MPTWSVYVLTSYE-LFEEV-YGKKATKKRKLYNGYLRTDLYQYWGPRKPR 388 (393)
T ss_dssp HHHHHHHHHHHHHT-CTTCEEEEEECCT-THHHH-HTSCCSEEEEEC----CEEEEEECCC----
T ss_pred HHHHHHHHHHHHhc-CCCCEEEEEECCH-HHHHH-hCCCcccceEEecCCEEEEEEEEECCCCCC
Confidence 2222222221 012 3588887777643 33221 12222222 234 34455556554444444
No 25
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.62 E-value=5.1e-16 Score=134.82 Aligned_cols=130 Identities=18% Similarity=0.215 Sum_probs=80.8
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCC
Q 021116 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (317)
Q Consensus 128 ~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~ 206 (317)
..||.++.+.+.+.+.+... .++.+|||+|||+|.+++.++..+. .+|+++|+|+.++ +.|++|++.++.
T Consensus 9 ~p~~~~~~~~~~~~~~l~~~------~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~-- 79 (215)
T 4dzr_A 9 IPRPDTEVLVEEAIRFLKRM------PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDAL-AVARRNAERFGA-- 79 (215)
T ss_dssp SCCHHHHHHHHHHHHHHTTC------CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------
T ss_pred CCCccHHHHHHHHHHHhhhc------CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHhCC--
Confidence 45788888888888887541 3578999999999999999888753 3899999999999 999999998887
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc-H--------------------------HHHHHHHHHcCCc
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD-Y--------------------------EVLMAQISKSALV 259 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~-~--------------------------~~~l~~L~~~~lL 259 (317)
+++++++|+.+.+.... ...++||+|++||||.... . ...++. ..++|
T Consensus 80 ~~~~~~~d~~~~~~~~~---~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~L 154 (215)
T 4dzr_A 80 VVDWAAADGIEWLIERA---ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL--PPYVL 154 (215)
T ss_dssp ---CCHHHHHHHHHHHH---HTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTC--CGGGB
T ss_pred ceEEEEcchHhhhhhhh---hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH--HHHHh
Confidence 58899999988654310 0137899999999996421 1 122222 24789
Q ss_pred CCCeE-EEEEeCC
Q 021116 260 GKDSF-IVVEYPL 271 (317)
Q Consensus 260 kpgG~-ivv~~~~ 271 (317)
+|||+ ++++...
T Consensus 155 kpgG~l~~~~~~~ 167 (215)
T 4dzr_A 155 ARGRAGVFLEVGH 167 (215)
T ss_dssp CSSSEEEEEECTT
T ss_pred cCCCeEEEEEECC
Confidence 99999 7777654
No 26
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.62 E-value=1.1e-15 Score=135.14 Aligned_cols=121 Identities=13% Similarity=0.047 Sum_probs=97.4
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEE
Q 021116 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (317)
Q Consensus 132 t~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii 211 (317)
+...++..+++.+.. .++.+|||+|||+|.+++++++++ .+|+++|+++.++ +.|++|++.+|+.++++++
T Consensus 39 ~~~~~~~~~l~~l~~-------~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~-~~a~~~~~~~g~~~~v~~~ 109 (204)
T 3njr_A 39 TKSPMRALTLAALAP-------RRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRI-ENIQKNIDTYGLSPRMRAV 109 (204)
T ss_dssp CCHHHHHHHHHHHCC-------CTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEE
T ss_pred CcHHHHHHHHHhcCC-------CCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHH-HHHHHHHHHcCCCCCEEEE
Confidence 456677777777654 467899999999999999988884 5899999999999 9999999999997679999
Q ss_pred EecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 212 TVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 212 ~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
++|+.+.+.. .+.||+|++++.. ..+ +++.+. ++|+|||++++.......
T Consensus 110 ~~d~~~~~~~-------~~~~D~v~~~~~~---~~~-~l~~~~--~~LkpgG~lv~~~~~~~~ 159 (204)
T 3njr_A 110 QGTAPAALAD-------LPLPEAVFIGGGG---SQA-LYDRLW--EWLAPGTRIVANAVTLES 159 (204)
T ss_dssp ESCTTGGGTT-------SCCCSEEEECSCC---CHH-HHHHHH--HHSCTTCEEEEEECSHHH
T ss_pred eCchhhhccc-------CCCCCEEEECCcc---cHH-HHHHHH--HhcCCCcEEEEEecCccc
Confidence 9999875421 2579999999733 344 666665 479999999998875444
No 27
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=2.5e-15 Score=145.54 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=104.7
Q ss_pred ceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHH
Q 021116 118 RKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLI 196 (317)
Q Consensus 118 G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar 196 (317)
+..+...++.+.....+...+.+.+.+.. ..+.+|||+|||+|.+++.++.++ ..+|++||+|+.++ +.|+
T Consensus 192 ~~~~~~~pg~Fs~~~~d~~~~~ll~~l~~-------~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al-~~Ar 263 (375)
T 4dcm_A 192 DWTIHNHANVFSRTGLDIGARFFMQHLPE-------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAV-ASSR 263 (375)
T ss_dssp TEEEEECTTCTTCSSCCHHHHHHHHTCCC-------SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHH-HHHH
T ss_pred ceEEEeCCCcccCCcccHHHHHHHHhCcc-------cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHH-HHHH
Confidence 34566666666665556555566555543 345899999999999999998875 56899999999999 9999
Q ss_pred HhHHHhCCCC--ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc------cHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 197 PNLEWTGFLD--VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV------DYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 197 ~N~~~~gl~~--~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~------~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|++.+++.+ +++++.+|+.+.+ ..++||+|++||||+.. ...++++.+. ++|+|||++++.
T Consensus 264 ~n~~~ngl~~~~~v~~~~~D~~~~~--------~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~--~~LkpgG~l~iv 333 (375)
T 4dcm_A 264 LNVETNMPEALDRCEFMINNALSGV--------EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHAR--RCLKINGELYIV 333 (375)
T ss_dssp HHHHHHCGGGGGGEEEEECSTTTTC--------CTTCEEEEEECCCC-------CCHHHHHHHHHH--HHEEEEEEEEEE
T ss_pred HHHHHcCCCcCceEEEEechhhccC--------CCCCeeEEEECCCcccCcccCHHHHHHHHHHHH--HhCCCCcEEEEE
Confidence 9999999764 4788999987643 24689999999999742 1234555554 489999999998
Q ss_pred eCCCCCc
Q 021116 269 YPLRTDM 275 (317)
Q Consensus 269 ~~~~~~l 275 (317)
++.....
T Consensus 334 ~n~~~~~ 340 (375)
T 4dcm_A 334 ANRHLDY 340 (375)
T ss_dssp EETTSCH
T ss_pred EECCcCH
Confidence 8766543
No 28
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=4e-15 Score=144.53 Aligned_cols=137 Identities=20% Similarity=0.182 Sum_probs=104.7
Q ss_pred EEecCCCCCC----CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHH
Q 021116 120 KLLSPKGMDV----RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVL 195 (317)
Q Consensus 120 ~l~~p~~~~~----rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~a 195 (317)
.+....+.+. ++++..+.+.+.+.+... ..++.+|||+|||+|.+++.++++|+ +|++||+|+.++ +.|
T Consensus 199 ~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~-----~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al-~~A 271 (381)
T 3dmg_A 199 TFHHLPGVFSAGKVDPASLLLLEALQERLGPE-----GVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASV-LSL 271 (381)
T ss_dssp EEEECTTCTTTTSCCHHHHHHHHHHHHHHCTT-----TTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHH-HHH
T ss_pred EEEeCCCceeCCCCCHHHHHHHHHHHHhhccc-----CCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHH-HHH
Confidence 4455555543 456677777776665311 13678999999999999999988876 899999999999 999
Q ss_pred HHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc------cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 196 IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV------DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 196 r~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~------~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++|++.+++. ++++.+|+.+... ..++||+|++||||+.+ .....++.+. ++|+|||++++.+
T Consensus 272 ~~n~~~~~~~--v~~~~~D~~~~~~-------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~--~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 272 QKGLEANALK--AQALHSDVDEALT-------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAA--ARLRPGGVFFLVS 340 (381)
T ss_dssp HHHHHHTTCC--CEEEECSTTTTSC-------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred HHHHHHcCCC--eEEEEcchhhccc-------cCCCeEEEEECCchhhcccccHHHHHHHHHHHH--HhcCcCcEEEEEE
Confidence 9999999874 7899999887531 23689999999999752 2344555444 5899999999998
Q ss_pred CCCCC
Q 021116 270 PLRTD 274 (317)
Q Consensus 270 ~~~~~ 274 (317)
+....
T Consensus 341 n~~l~ 345 (381)
T 3dmg_A 341 NPFLK 345 (381)
T ss_dssp CTTSC
T ss_pred cCCCC
Confidence 76644
No 29
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.61 E-value=3.3e-15 Score=144.37 Aligned_cols=111 Identities=19% Similarity=0.220 Sum_probs=89.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.++.. +.+|+++|+++.++ +.|++|++.||+.+ ++++++|+.+++.... ....+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~-~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~---~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEAL-RRAEENARLNGLGN-VRVLEANAFDLLRRLE---KEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHH-HHHHHHHHHTTCTT-EEEEESCHHHHHHHHH---HTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHHHcCCCC-ceEEECCHHHHHHHHH---hcCCCeeE
Confidence 4679999999999999998877 66899999999999 99999999999976 9999999999875432 12368999
Q ss_pred EEECCCCCCc----------cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 235 MSVTPPYTAV----------DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 235 V~~dPPy~~~----------~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
|++|||+... .+.+++..+. ++|+|||++++.+....
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAI--KLLKEGGILATASCSHH 329 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHH--HTEEEEEEEEEEECCTT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHH--HhcCCCCEEEEEECCCC
Confidence 9999998431 2334444433 58999999998877543
No 30
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.61 E-value=6.6e-15 Score=128.66 Aligned_cols=121 Identities=15% Similarity=0.070 Sum_probs=99.1
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEE
Q 021116 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSI 210 (317)
Q Consensus 132 t~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~i 210 (317)
+...++..+++.+.. .++.+|||+|||+|.+++.++..+ ..+|+++|+++.++ +.|++|++.+++ +++++
T Consensus 24 ~~~~i~~~~l~~l~~-------~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~v~~ 94 (204)
T 3e05_A 24 TKQEVRAVTLSKLRL-------QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYL-GFIRDNLKKFVA-RNVTL 94 (204)
T ss_dssp CCHHHHHHHHHHTTC-------CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHH-HHHHHHHHHHTC-TTEEE
T ss_pred ChHHHHHHHHHHcCC-------CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHhCC-CcEEE
Confidence 667777777777654 467899999999999999988876 46899999999999 999999999998 56999
Q ss_pred EEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 211 HTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 211 i~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+++|+.+.+.. .+.||+|+++.++. .....++.+. ++|+|||++++.....
T Consensus 95 ~~~d~~~~~~~-------~~~~D~i~~~~~~~--~~~~~l~~~~--~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 95 VEAFAPEGLDD-------LPDPDRVFIGGSGG--MLEEIIDAVD--RRLKSEGVIVLNAVTL 145 (204)
T ss_dssp EECCTTTTCTT-------SCCCSEEEESCCTT--CHHHHHHHHH--HHCCTTCEEEEEECBH
T ss_pred EeCChhhhhhc-------CCCCCEEEECCCCc--CHHHHHHHHH--HhcCCCeEEEEEeccc
Confidence 99998765421 26799999998764 6677777775 4899999999987643
No 31
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.60 E-value=8e-15 Score=142.67 Aligned_cols=156 Identities=18% Similarity=0.200 Sum_probs=106.0
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-------------------------------
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC------------------------------- 178 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga------------------------------- 178 (317)
-|..+.++.++.....- .++..+||+|||||++.|||+..+.
T Consensus 176 Apl~e~LAaall~l~~~-------~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~ 248 (384)
T 3ldg_A 176 APIKENMAAAIILLSNW-------FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEAD 248 (384)
T ss_dssp CCCCHHHHHHHHHHTTC-------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCC-------CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHH
Confidence 35667777777655432 3578999999999999999886543
Q ss_pred --------CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc-----c
Q 021116 179 --------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-----D 245 (317)
Q Consensus 179 --------~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-----~ 245 (317)
.+|+++|+|+.++ +.|++|++.+|+.++++++++|+.++. ...+||+|++||||+.. .
T Consensus 249 ~~~~~~~~~~v~GvDid~~al-~~Ar~Na~~~gl~~~I~~~~~D~~~l~--------~~~~fD~Iv~NPPYG~rl~~~~~ 319 (384)
T 3ldg_A 249 EQADYDIQLDISGFDFDGRMV-EIARKNAREVGLEDVVKLKQMRLQDFK--------TNKINGVLISNPPYGERLLDDKA 319 (384)
T ss_dssp HHCCTTCCCCEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCGGGCC--------CCCCSCEEEECCCCTTTTSCHHH
T ss_pred HhhhccCCceEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChHHCC--------ccCCcCEEEECCchhhccCCHHH
Confidence 2599999999999 999999999999888999999998753 13589999999999753 1
Q ss_pred HHHHHHHHHH-cCCcCCCeEEEEEeCCCCCccccCCCeEEEEE-eec-CceEEEEEeechhh
Q 021116 246 YEVLMAQISK-SALVGKDSFIVVEYPLRTDMLDTCGCLVKIKD-RRF-GRTHLAIYGPDWAQ 304 (317)
Q Consensus 246 ~~~~l~~L~~-~~lLkpgG~ivv~~~~~~~l~~~~~~~~~~~~-r~y-G~~~l~~~~p~~~~ 304 (317)
...+...+.+ .+. -+|+.+++-++.. .+... -++...+. +-| |..+..+|....+.
T Consensus 320 l~~ly~~lg~~lk~-~~g~~~~iit~~~-~l~~~-~g~~~~~~~~l~nG~l~~~~~~~~~~~ 378 (384)
T 3ldg_A 320 VDILYNEMGETFAP-LKTWSQFILTNDT-DFEQK-FGRKADKKRKLYNGSLKVDLYQFYGQR 378 (384)
T ss_dssp HHHHHHHHHHHHTT-CTTSEEEEEESCT-THHHH-HTSCCSEEEEEEETTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhh-CCCcEEEEEECCH-HHHHH-hCCCccceeEEecCCEEEEEEEEECCC
Confidence 2333333321 112 3588888777643 33221 12222222 223 55666666554443
No 32
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.60 E-value=4.5e-15 Score=144.79 Aligned_cols=105 Identities=22% Similarity=0.271 Sum_probs=84.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||||.+++.++..|+. |++||+|+.++ +.|++|++.||+.+ ++.++|+.+++... .+.||+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al-~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD~ 283 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEAL-GVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFHH 283 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHH-HHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHH-HHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCCE
Confidence 4889999999999999999988876 99999999999 99999999999975 46699999987543 234999
Q ss_pred EEECCCCCCc----------cHHHHHHHHHHcCCcCCCeEEE-EEeCC
Q 021116 235 MSVTPPYTAV----------DYEVLMAQISKSALVGKDSFIV-VEYPL 271 (317)
Q Consensus 235 V~~dPPy~~~----------~~~~~l~~L~~~~lLkpgG~iv-v~~~~ 271 (317)
|++|||+... .+.+++..+. ++|+|||+++ +++..
T Consensus 284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~--~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 284 VLLDPPTLVKRPEELPAMKRHLVDLVREAL--RLLAEEGFLWLSSCSY 329 (393)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHHHHHHHHH--HTEEEEEEEEEEECCT
T ss_pred EEECCCcCCCCHHHHHHHHHHHHHHHHHHH--HhcCCCCEEEEEECCC
Confidence 9999997432 2344444443 5899999998 44443
No 33
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.60 E-value=1.2e-14 Score=140.09 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=97.6
Q ss_pred eEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Q 021116 119 KKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPN 198 (317)
Q Consensus 119 ~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N 198 (317)
.++...++.++.+... ..+.+++++.... ...+.+|||+|||+|.+++.++. ++.+|++||+++.++ +.|++|
T Consensus 182 ~~~~~~~~~F~Q~n~~-~~~~l~~~~~~~~----~~~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai-~~a~~n 254 (369)
T 3bt7_A 182 MIYRQVENSFTQPNAA-MNIQMLEWALDVT----KGSKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSV-AAAQYN 254 (369)
T ss_dssp CEEEEETTSCCCSBHH-HHHHHHHHHHHHT----TTCCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHH-HHHHHH
T ss_pred EEEEECCCCeecCCHH-HHHHHHHHHHHHh----hcCCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHH-HHHHHH
Confidence 4455555556555543 3344444432221 12367899999999999997765 556899999999999 999999
Q ss_pred HHHhCCCCceEEEEecHHHHHHHHhhh---------cCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 199 LEWTGFLDVSSIHTVRVETFLERAEQF---------VGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 199 ~~~~gl~~~v~ii~gD~~~~l~~~~~~---------~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++.+|+. +++++++|+.+++...... ...+..||+|++|||+. +...+.++.+ .+++.++|++|
T Consensus 255 ~~~ng~~-~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-g~~~~~~~~l-----~~~g~ivyvsc 327 (369)
T 3bt7_A 255 IAANHID-NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-GLDSETEKMV-----QAYPRILYISC 327 (369)
T ss_dssp HHHTTCC-SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-CCCHHHHHHH-----TTSSEEEEEES
T ss_pred HHHcCCC-ceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcc-ccHHHHHHHH-----hCCCEEEEEEC
Confidence 9999995 5999999999887543200 00003799999999985 3445566554 25677778888
Q ss_pred CCCC
Q 021116 270 PLRT 273 (317)
Q Consensus 270 ~~~~ 273 (317)
+..+
T Consensus 328 ~p~t 331 (369)
T 3bt7_A 328 NPET 331 (369)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7543
No 34
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=2.9e-15 Score=128.62 Aligned_cols=107 Identities=9% Similarity=-0.015 Sum_probs=81.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.++++ ..+|+++|+++.++ +.|++|++.+++ ++++++++|+.++... .+++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l-~~a~~~~~~~~~-~~v~~~~~~~~~l~~~------~~~~fD 91 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQAL-GKTSQRLSDLGI-ENTELILDGHENLDHY------VREPIR 91 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHH-HHHHHHHHHHTC-CCEEEEESCGGGGGGT------CCSCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHH-HHHHHHHHHcCC-CcEEEEeCcHHHHHhh------ccCCcC
Confidence 36789999999999999998887 45899999999999 999999999998 5699999887664211 246899
Q ss_pred EEEECCCCCCc-------cHH---HHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 234 YMSVTPPYTAV-------DYE---VLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 234 lV~~dPPy~~~-------~~~---~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|+++++|... ..+ ..++.+. ++|+|||++++....
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKIL--DRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHH--HHEEEEEEEEEEEC-
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHH--HhcCCCcEEEEEEeC
Confidence 99999776432 222 2333333 589999999887653
No 35
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.60 E-value=2e-14 Score=122.23 Aligned_cols=122 Identities=18% Similarity=0.149 Sum_probs=101.2
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
+++...++..+.+.+.. .++.+|||+|||+|.+++.++..+ .+|+++|+++.++ +.+++|++.+++.++++
T Consensus 15 ~~~~~~~~~~~~~~~~~-------~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~-~~a~~~~~~~~~~~~~~ 85 (192)
T 1l3i_A 15 GPTAMEVRCLIMCLAEP-------GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAI-STTEMNLQRHGLGDNVT 85 (192)
T ss_dssp CCCCHHHHHHHHHHHCC-------CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHH-HHHHHHHHHTTCCTTEE
T ss_pred CCChHHHHHHHHHhcCC-------CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHH-HHHHHHHHHcCCCcceE
Confidence 58888888888887754 467899999999999999888877 6899999999999 99999999999866799
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
++++|+.+.+.. .+.||+|++++++. .....++.+. ++|+|||++++....
T Consensus 86 ~~~~d~~~~~~~-------~~~~D~v~~~~~~~--~~~~~l~~~~--~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 86 LMEGDAPEALCK-------IPDIDIAVVGGSGG--ELQEILRIIK--DKLKPGGRIIVTAIL 136 (192)
T ss_dssp EEESCHHHHHTT-------SCCEEEEEESCCTT--CHHHHHHHHH--HTEEEEEEEEEEECB
T ss_pred EEecCHHHhccc-------CCCCCEEEECCchH--HHHHHHHHHH--HhcCCCcEEEEEecC
Confidence 999998874421 15799999998753 4567777765 489999999987654
No 36
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=7.5e-16 Score=137.87 Aligned_cols=122 Identities=17% Similarity=0.211 Sum_probs=95.0
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
.++.+.+.+.+...+... .++.+|||+|||+|.+++.++..| .+|+++|+++.++ +.|++|++.+++.++++
T Consensus 59 ~~~~~~~~~~l~~~~~~~------~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~ 130 (241)
T 3gdh_A 59 SVTPEKIAEHIAGRVSQS------FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKI-ALARNNAEVYGIADKIE 130 (241)
T ss_dssp HCCCHHHHHHHHHHHHHH------SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHH-HHHHHHHHHTTCGGGEE
T ss_pred ecCHHHHHHHHHHHhhhc------cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHH-HHHHHHHHHcCCCcCeE
Confidence 445566677777776543 368899999999999999999887 5899999999999 99999999999866799
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHH-HHHHHHHHcCCcCCCeEEEEEe
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYE-VLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~-~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++++|+.++.. .++||+|++||||...... ..+..+ .++|+|||+++++.
T Consensus 131 ~~~~d~~~~~~--------~~~~D~v~~~~~~~~~~~~~~~~~~~--~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 131 FICGDFLLLAS--------FLKADVVFLSPPWGGPDYATAETFDI--RTMMSPDGFEIFRL 181 (241)
T ss_dssp EEESCHHHHGG--------GCCCSEEEECCCCSSGGGGGSSSBCT--TTSCSSCHHHHHHH
T ss_pred EEECChHHhcc--------cCCCCEEEECCCcCCcchhhhHHHHH--HhhcCCcceeHHHH
Confidence 99999988641 3689999999999753221 112112 35788888876654
No 37
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.59 E-value=2.5e-15 Score=133.37 Aligned_cols=108 Identities=16% Similarity=0.105 Sum_probs=84.4
Q ss_pred CCCCeEEEECCC-cchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSG-TGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcG-tG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+||| +|.+++.++..+..+|+++|+|+.++ +.|++|++.+++ +++++++|+..+.. ..+++|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~--~v~~~~~d~~~~~~------~~~~~f 124 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFF-EYARRNIERNNS--NVRLVKSNGGIIKG------VVEGTF 124 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHH-HHHHHHHHHTTC--CCEEEECSSCSSTT------TCCSCE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHH-HHHHHHHHHhCC--CcEEEeCCchhhhh------cccCce
Confidence 367899999999 99999998877345799999999999 999999999998 58999999643211 124789
Q ss_pred cEEEECCCCCCcc--------------------HHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 233 DYMSVTPPYTAVD--------------------YEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 233 DlV~~dPPy~~~~--------------------~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+|++||||.... +...++.+. ++|+|||++++..+..
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAF--DHLNPGGKVALYLPDK 182 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHG--GGEEEEEEEEEEEESC
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHH--HHhCCCeEEEEEeccc
Confidence 9999999996421 244455443 6899999999876543
No 38
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.59 E-value=1.3e-14 Score=142.77 Aligned_cols=138 Identities=19% Similarity=0.159 Sum_probs=106.0
Q ss_pred ceEEecCCCCCCCCC---hHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHH
Q 021116 118 RKKLLSPKGMDVRPM---MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNV 194 (317)
Q Consensus 118 G~~l~~p~~~~~rpt---~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ 194 (317)
|.++..+++.++.+. ++.+.+.+.+++.. ..+.+|||+|||+|.+++.++.. ..+|+++|+++.++ +.
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~-------~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al-~~ 323 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDV-------QPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALV-EK 323 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTC-------CTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHH-HH
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcC-------CCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHH-HH
Confidence 788888877765543 44455556566543 35789999999999999988877 45899999999999 99
Q ss_pred HHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 195 LIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 195 ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
|++|++.+|+. +++++++|+.+.+... +...++||+|++||||... .++++.+.. ++|++++|++|+..+
T Consensus 324 A~~n~~~~~~~-~v~f~~~d~~~~l~~~---~~~~~~fD~Vv~dPPr~g~--~~~~~~l~~---~~p~~ivyvsc~p~t 393 (433)
T 1uwv_A 324 GQQNARLNGLQ-NVTFYHENLEEDVTKQ---PWAKNGFDKVLLDPARAGA--AGVMQQIIK---LEPIRIVYVSCNPAT 393 (433)
T ss_dssp HHHHHHHTTCC-SEEEEECCTTSCCSSS---GGGTTCCSEEEECCCTTCC--HHHHHHHHH---HCCSEEEEEESCHHH
T ss_pred HHHHHHHcCCC-ceEEEECCHHHHhhhh---hhhcCCCCEEEECCCCccH--HHHHHHHHh---cCCCeEEEEECChHH
Confidence 99999999986 5999999998753210 1123579999999999743 356676653 789999999998553
No 39
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.59 E-value=9.3e-15 Score=141.05 Aligned_cols=150 Identities=17% Similarity=0.144 Sum_probs=107.2
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
.|....++..+...+ . .++.+|||+|||+|.++++++..+. .+|+++|+|+.++ +.|++|++.+|+.+++
T Consensus 200 a~l~~~la~~l~~~~-~-------~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l-~~A~~n~~~~gl~~~i 270 (373)
T 3tm4_A 200 AHLKASIANAMIELA-E-------LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHL-IGAEMNALAAGVLDKI 270 (373)
T ss_dssp TCCCHHHHHHHHHHH-T-------CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHH-HHHHHHHHHTTCGGGC
T ss_pred CCccHHHHHHHHHhh-c-------CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHHHHcCCCCce
Confidence 345677777777766 3 4678999999999999999998875 3799999999999 9999999999997789
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---------HHHHHHHHHHcCCcCCCeEEEEEeCCCCCcccc-
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---------YEVLMAQISKSALVGKDSFIVVEYPLRTDMLDT- 278 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---------~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~~- 278 (317)
+++++|+.++. ...++||+|++||||+... |..+++.+. ++| +|.+++.......+...
T Consensus 271 ~~~~~D~~~~~-------~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~--r~l--~g~~~~i~~~~~~~~~~~ 339 (373)
T 3tm4_A 271 KFIQGDATQLS-------QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELA--KVL--EKRGVFITTEKKAIEEAI 339 (373)
T ss_dssp EEEECCGGGGG-------GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHH--HHE--EEEEEEEESCHHHHHHHH
T ss_pred EEEECChhhCC-------cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHH--HHc--CCeEEEEECCHHHHHHHH
Confidence 99999998753 1246899999999998531 344555554 356 44444434333222211
Q ss_pred -CCCeEEEEEee--cCceEEEEEe
Q 021116 279 -CGCLVKIKDRR--FGRTHLAIYG 299 (317)
Q Consensus 279 -~~~~~~~~~r~--yG~~~l~~~~ 299 (317)
..||...+.+. -|.....+|.
T Consensus 340 ~~~G~~~~~~~~~~nG~l~~~~~~ 363 (373)
T 3tm4_A 340 AENGFEIIHHRVIGHGGLMVHLYV 363 (373)
T ss_dssp HHTTEEEEEEEEEEETTEEEEEEE
T ss_pred HHcCCEEEEEEEEEcCCEEEEEEe
Confidence 25777765544 4567777775
No 40
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.57 E-value=1.9e-14 Score=125.56 Aligned_cols=131 Identities=18% Similarity=0.181 Sum_probs=97.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.+++.+..+|+++|+++.++ +.|++|++.+++.+ ++++++|+.+.. .++||+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~-v~~~~~d~~~~~---------~~~fD~ 128 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESM-TAAEENAALNGIYD-IALQKTSLLADV---------DGKFDL 128 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCC-CEEEESSTTTTC---------CSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCc-eEEEeccccccC---------CCCceE
Confidence 5789999999999999998888777899999999999 99999999999876 999999987642 478999
Q ss_pred EEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCccc-----cCCCeEEEEEeecCc-eEEEEEee
Q 021116 235 MSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDMLD-----TCGCLVKIKDRRFGR-THLAIYGP 300 (317)
Q Consensus 235 V~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~-----~~~~~~~~~~r~yG~-~~l~~~~p 300 (317)
|++++++. .+...++.+ .++|+|||++++.........+ ...||.+.+....+. ..+.-.+|
T Consensus 129 i~~~~~~~--~~~~~l~~~--~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 129 IVANILAE--ILLDLIPQL--DSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEESCHH--HHHHHGGGS--GGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEETTEEEEEEEEC
T ss_pred EEECCcHH--HHHHHHHHH--HHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeeccCCEEEEEEecc
Confidence 99998753 233334333 3689999999987443322211 136787776655544 33333333
No 41
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=99.57 E-value=1.9e-15 Score=141.27 Aligned_cols=120 Identities=13% Similarity=0.184 Sum_probs=100.0
Q ss_pred HHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH
Q 021116 139 AAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF 218 (317)
Q Consensus 139 alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~ 218 (317)
..|+.+.. ..+..+||+|+|||.+++|+++++ .++++||.++.++ +..++|++. .+++++++.|+...
T Consensus 82 ~yf~~l~~-------~n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~-~~L~~Nl~~---~~~~~V~~~D~~~~ 149 (283)
T 2oo3_A 82 EYISVIKQ-------INLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEY-NFLLKLPHF---NKKVYVNHTDGVSK 149 (283)
T ss_dssp HHHHHHHH-------HSSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHH-HHHTTSCCT---TSCEEEECSCHHHH
T ss_pred HHHHHHHH-------hcCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHH-HHHHHHhCc---CCcEEEEeCcHHHH
Confidence 56677765 246679999999999999999955 8999999999998 999999975 36799999999988
Q ss_pred HHHHhhhcCCCCCccEEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 219 LERAEQFVGKDGPFDYMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 219 l~~~~~~~~~~~~fDlV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+..+. ....+||+||+||||. +..++++++.+.+..++.++|++++-++...
T Consensus 150 L~~l~---~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 150 LNALL---PPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp HHHHC---SCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred HHHhc---CCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 86542 2234799999999998 4688999988877678899999999988543
No 42
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.57 E-value=3.9e-14 Score=125.75 Aligned_cols=114 Identities=13% Similarity=0.139 Sum_probs=88.1
Q ss_pred CCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++.. ...+|++||+++.++ +.|++|++.+++.++++++++|+.+.+..+.. ....++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~-~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCA-AITQQMLNFAGLQDKVTILNGASQDLIPQLKK-KYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHGGGTTT-TSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHH-HHHHHHHHHcCCCCceEEEECCHHHHHHHHHH-hcCCCce
Confidence 5689999999999999988763 245899999999999 99999999999988899999999886543210 0011589
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+||+|.+. ..+...++.+...++|+|||++++.....
T Consensus 136 D~V~~d~~~--~~~~~~~~~~~~~~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 136 DMVFLDHWK--DRYLPDTLLLEKCGLLRKGTVLLADNVIV 173 (221)
T ss_dssp SEEEECSCG--GGHHHHHHHHHHTTCCCTTCEEEESCCCC
T ss_pred EEEEEcCCc--ccchHHHHHHHhccccCCCeEEEEeCCCC
Confidence 999999743 24555555554347999999999876543
No 43
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.57 E-value=3.7e-15 Score=137.74 Aligned_cols=104 Identities=12% Similarity=0.055 Sum_probs=86.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.+++.+ ..+|+++|+|+.++ +.|++|++.+++.+ ++++++|+.++ .. .+.|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av-~~a~~n~~~n~l~~-~~~~~~d~~~~-~~-------~~~~ 187 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAY-HYLCENIKLNKLNN-VIPILADNRDV-EL-------KDVA 187 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHH-HHHHHHHHHTTCSS-EEEEESCGGGC-CC-------TTCE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-EEEEECChHHc-Cc-------cCCc
Confidence 357899999999999999988873 56899999999999 99999999999965 88999999876 21 3689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+|++|||+. +.+.+..+. +.|+|||++++.+...
T Consensus 188 D~Vi~d~p~~---~~~~l~~~~--~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 188 DRVIMGYVHK---THKFLDKTF--EFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEEEECCCSS---GGGGHHHHH--HHEEEEEEEEEEEEEE
T ss_pred eEEEECCccc---HHHHHHHHH--HHcCCCCEEEEEEcCc
Confidence 9999999983 334444443 3689999999998755
No 44
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.55 E-value=6.7e-14 Score=137.79 Aligned_cols=134 Identities=16% Similarity=0.151 Sum_probs=101.3
Q ss_pred ecceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHH
Q 021116 116 ARRKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVL 195 (317)
Q Consensus 116 ~~G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~a 195 (317)
+.|.++..+.+.++..... ..+.+++++... .++.+|||+|||+|.+++.++..+ .+|+++|+++.++ +.|
T Consensus 258 ~~g~~f~~~~~~F~q~n~~-~~e~l~~~~~~~------~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai-~~A 328 (425)
T 2jjq_A 258 LDDVDYLIHPNSFFQTNSY-QAVNLVRKVSEL------VEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAI-EMA 328 (425)
T ss_dssp ETTEEEEECTTSCCCSBHH-HHHHHHHHHHHH------CCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHH-HHH
T ss_pred ECCEEEEEccccccccCHH-HHHHHHHHhhcc------CCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHH-HHH
Confidence 3577777777666554332 233333333211 357899999999999999888765 5899999999999 999
Q ss_pred HHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 196 IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 196 r~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
++|++.+|+. ++++++|+.+++ ..+||+|++|||+. +..+.+++.+. .|+|+|++|++|+..+
T Consensus 329 ~~n~~~ngl~--v~~~~~d~~~~~---------~~~fD~Vv~dPPr~-g~~~~~~~~l~---~l~p~givyvsc~p~t 391 (425)
T 2jjq_A 329 RRNVEINNVD--AEFEVASDREVS---------VKGFDTVIVDPPRA-GLHPRLVKRLN---REKPGVIVYVSCNPET 391 (425)
T ss_dssp HHHHHHHTCC--EEEEECCTTTCC---------CTTCSEEEECCCTT-CSCHHHHHHHH---HHCCSEEEEEESCHHH
T ss_pred HHHHHHcCCc--EEEEECChHHcC---------ccCCCEEEEcCCcc-chHHHHHHHHH---hcCCCcEEEEECChHH
Confidence 9999999985 999999998753 13799999999975 33455666665 4899999999998643
No 45
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=1.3e-13 Score=116.51 Aligned_cols=120 Identities=18% Similarity=0.168 Sum_probs=98.5
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
+++...+...+.+.+.. .++.+|||+|||+|.+++.++. +..+|+++|+++.++ +.+++|++.+++. +++
T Consensus 17 ~~~~~~~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~-~~a~~~~~~~~~~-~~~ 86 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNL-------NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAI-EVTKQNLAKFNIK-NCQ 86 (183)
T ss_dssp CCCCHHHHHHHHHHHCC-------CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHH-HHHHHHHHHTTCC-SEE
T ss_pred CcCHHHHHHHHHHHcCC-------CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHH-HHHHHHHHHcCCC-cEE
Confidence 67778888888888753 4678999999999999998877 556899999999999 9999999999984 599
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
++++|+.+.+. .++||+|+++++ ......++.+.. + |||++++.......
T Consensus 87 ~~~~d~~~~~~--------~~~~D~i~~~~~---~~~~~~l~~~~~--~--~gG~l~~~~~~~~~ 136 (183)
T 2yxd_A 87 IIKGRAEDVLD--------KLEFNKAFIGGT---KNIEKIIEILDK--K--KINHIVANTIVLEN 136 (183)
T ss_dssp EEESCHHHHGG--------GCCCSEEEECSC---SCHHHHHHHHHH--T--TCCEEEEEESCHHH
T ss_pred EEECCcccccc--------CCCCcEEEECCc---ccHHHHHHHHhh--C--CCCEEEEEeccccc
Confidence 99999987321 268999999988 467778887764 3 99999998764443
No 46
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.55 E-value=2.7e-14 Score=135.97 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=82.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++. ++ ++.+|+++|+|+.++ +.|++|++.|++.++++++++|+.+++ .+||+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai-~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~fD~ 261 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAI-ELLKKNIKLNKLEHKIIPILSDVREVD----------VKGNR 261 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCGGGCC----------CCEEE
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECChHHhc----------CCCcE
Confidence 578999999999999999 76 677999999999999 999999999999777999999998763 57999
Q ss_pred EEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|++|||+... ++++.+. ++|++||++++...
T Consensus 262 Vi~dpP~~~~---~~l~~~~--~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 262 VIMNLPKFAH---KFIDKAL--DIVEEGGVIHYYTI 292 (336)
T ss_dssp EEECCTTTGG---GGHHHHH--HHEEEEEEEEEEEE
T ss_pred EEECCcHhHH---HHHHHHH--HHcCCCCEEEEEEe
Confidence 9999997543 3444443 36899998877543
No 47
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.54 E-value=1.4e-13 Score=121.54 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=89.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G--a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++..- ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+..+.. ...++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~--~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHA-DIARSNIERANLNDRVEVRTGLALDSLQQIEN--EKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH--TTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh--cCCCCc
Confidence 57899999999999999887751 34899999999999 99999999999988899999999887654421 011579
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+||+|++. ..+...++.+. ++|+|||++++....
T Consensus 135 D~v~~d~~~--~~~~~~l~~~~--~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 135 DFIFIDADK--QNNPAYFEWAL--KLSRPGTVIIGDNVV 169 (223)
T ss_dssp SEEEECSCG--GGHHHHHHHHH--HTCCTTCEEEEESCS
T ss_pred CEEEEcCCc--HHHHHHHHHHH--HhcCCCcEEEEeCCC
Confidence 999999863 35677777765 489999999987553
No 48
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.54 E-value=8.5e-15 Score=126.87 Aligned_cols=108 Identities=12% Similarity=0.032 Sum_probs=85.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|.+++.++++ +..+|+++|+++.++ +.|++|++.+++.++++++++|+.++... ..++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~ 93 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAI-ANTTKKLTDLNLIDRVTLIKDGHQNMDKY------IDCP 93 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHHHHHTTCGGGEEEECSCGGGGGGT------CCSC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCeEEEECCHHHHhhh------ccCC
Confidence 35789999999999999988776 345899999999999 99999999999877799999998776421 2478
Q ss_pred ccEEEECCCCCCc----------cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 232 FDYMSVTPPYTAV----------DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 232 fDlV~~dPPy~~~----------~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
||+|++|+||... .....++.+. ++|+|||++++...
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAM--ELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHH--HHEEEEEEEEEEEC
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHH--HhCcCCCEEEEEEc
Confidence 9999999988221 1234455444 58999999998763
No 49
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.54 E-value=5e-14 Score=126.50 Aligned_cols=125 Identities=14% Similarity=0.115 Sum_probs=98.5
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
.|........+++.+... .++.+|||+|||+|.+++.++..+..+|+++|+++.++ +.+++|++.+|+.++++
T Consensus 27 ~~~~~~~~~~~l~~l~~~------~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~ 99 (257)
T 3f4k_A 27 GPGSPEATRKAVSFINEL------TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFI-EIFNENAVKANCADRVK 99 (257)
T ss_dssp SSCCHHHHHHHHTTSCCC------CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHH-HHHHHHHHHTTCTTTEE
T ss_pred CCCCHHHHHHHHHHHhcC------CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHH-HHHHHHHHHcCCCCceE
Confidence 455555555555554321 35789999999999999998887655899999999999 99999999999988899
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++++|+.++ +..+++||+|+++......+....++.+. ++|+|||++++...
T Consensus 100 ~~~~d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 100 GITGSMDNL-------PFQNEELDLIWSEGAIYNIGFERGMNEWS--KYLKKGGFIAVSEA 151 (257)
T ss_dssp EEECCTTSC-------SSCTTCEEEEEEESCSCCCCHHHHHHHHH--TTEEEEEEEEEEEE
T ss_pred EEECChhhC-------CCCCCCEEEEEecChHhhcCHHHHHHHHH--HHcCCCcEEEEEEe
Confidence 999998653 22357899999987654446677777765 69999999998763
No 50
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=6.5e-14 Score=125.67 Aligned_cols=105 Identities=12% Similarity=0.123 Sum_probs=88.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH-HHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE-RAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~-~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++... ..+|+++|+++.++ +.|++|++.+++.++++++.+|+.+.+. .. .++|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~f 143 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMI-QYAKQNLATYHFENQVRIIEGNALEQFENVN------DKVY 143 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHH-HHHHHHHHHTTCTTTEEEEESCGGGCHHHHT------TSCE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCHHHHHHhhc------cCCc
Confidence 57899999999999999887742 46899999999999 9999999999998789999999988765 43 3789
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+||+|.+. ..+...++.+. ++|+|||++++...
T Consensus 144 D~V~~~~~~--~~~~~~l~~~~--~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 144 DMIFIDAAK--AQSKKFFEIYT--PLLKHQGLVITDNV 177 (232)
T ss_dssp EEEEEETTS--SSHHHHHHHHG--GGEEEEEEEEEECT
T ss_pred cEEEEcCcH--HHHHHHHHHHH--HhcCCCeEEEEeeC
Confidence 999999753 35777777775 58999999998543
No 51
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.54 E-value=4.5e-14 Score=119.57 Aligned_cols=123 Identities=15% Similarity=0.054 Sum_probs=95.6
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
..|...++..+++.+.. .++.+|||+|||+|.+++.++.. +..+|+++|+++.++ +.|++|++.+++.+++
T Consensus 7 ~~t~~~~~~~~~~~~~~-------~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~ 78 (178)
T 3hm2_A 7 QLTKQHVRALAISALAP-------KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERR-ERILSNAINLGVSDRI 78 (178)
T ss_dssp CSHHHHHHHHHHHHHCC-------CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHH-HHHHHHHHTTTCTTSE
T ss_pred cccHHHHHHHHHHHhcc-------cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHHHHhCCCCCE
Confidence 34566777778777754 46789999999999999988776 345899999999999 9999999999987678
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
++++|+.+.+.. ..++||+|+++.+... ...++.+. ++|+|||++++.....
T Consensus 79 -~~~~d~~~~~~~------~~~~~D~i~~~~~~~~---~~~l~~~~--~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 79 -AVQQGAPRAFDD------VPDNPDVIFIGGGLTA---PGVFAAAW--KRLPVGGRLVANAVTV 130 (178)
T ss_dssp -EEECCTTGGGGG------CCSCCSEEEECC-TTC---TTHHHHHH--HTCCTTCEEEEEECSH
T ss_pred -EEecchHhhhhc------cCCCCCEEEECCcccH---HHHHHHHH--HhcCCCCEEEEEeecc
Confidence 888998654321 1268999999987643 45566655 4899999999887644
No 52
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.54 E-value=1.3e-13 Score=121.77 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=89.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++.. + ..+|+++|+++.++ +.|++|++.+|+.++++++++|+.+.+..... ....++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKST-ALAKEYWEKAGLSDKIGLRLSPAKDTLAELIH-AGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHT-TTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHH-HHHHHHHHHCCCCCceEEEeCCHHHHHHHhhh-ccCCCCc
Confidence 4679999999999999988775 2 46899999999999 99999999999988899999999887655420 0011689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+|++|++. ..+...++.+. ++|+|||++++....
T Consensus 142 D~v~~~~~~--~~~~~~l~~~~--~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 142 DLIYIDADK--ANTDLYYEESL--KLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEEECSCG--GGHHHHHHHHH--HHEEEEEEEEEECSS
T ss_pred cEEEECCCH--HHHHHHHHHHH--HhcCCCcEEEEeCCC
Confidence 999999863 35677777765 489999999987543
No 53
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.53 E-value=4.1e-15 Score=134.40 Aligned_cols=121 Identities=14% Similarity=0.040 Sum_probs=83.0
Q ss_pred eeecceEEecCCCCC-CC----CChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCC
Q 021116 114 GKARRKKLLSPKGMD-VR----PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMD 187 (317)
Q Consensus 114 G~~~G~~l~~p~~~~-~r----pt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin 187 (317)
..|.|.++..+.+.. .+ |.+..+...+++.+... ..++.+|||+|||+|.+++.++++. ..+|+++|++
T Consensus 24 ~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s 98 (254)
T 2h00_A 24 REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSD-----KSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVD 98 (254)
T ss_dssp HHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGG-----GCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESC
T ss_pred HHcCCeeeecCccccCCCccchHHHHHHHHHHHhhcccc-----CCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECC
Confidence 345677777766543 22 33333333333222110 0146799999999999999877652 3589999999
Q ss_pred HHHHHHHHHHhHHHhCCCCceEEEEecHHH-HHHHHhhhcCC-CCCccEEEECCCCCC
Q 021116 188 PWVVSNVLIPNLEWTGFLDVSSIHTVRVET-FLERAEQFVGK-DGPFDYMSVTPPYTA 243 (317)
Q Consensus 188 ~~al~~~ar~N~~~~gl~~~v~ii~gD~~~-~l~~~~~~~~~-~~~fDlV~~dPPy~~ 243 (317)
+.++ +.|++|++.+++.++++++++|+.+ +...+ +.. +++||+|++||||..
T Consensus 99 ~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~~~~~~fD~i~~npp~~~ 152 (254)
T 2h00_A 99 DMCF-NYAKKNVEQNNLSDLIKVVKVPQKTLLMDAL---KEESEIIYDFCMCNPPFFA 152 (254)
T ss_dssp HHHH-HHHHHHHHHTTCTTTEEEEECCTTCSSTTTS---TTCCSCCBSEEEECCCCC-
T ss_pred HHHH-HHHHHHHHHcCCCccEEEEEcchhhhhhhhh---hcccCCcccEEEECCCCcc
Confidence 9999 9999999999998889999999765 22111 000 157999999999964
No 54
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.53 E-value=4.4e-14 Score=129.71 Aligned_cols=142 Identities=12% Similarity=0.030 Sum_probs=105.5
Q ss_pred eeeecceEEecCCCC---CCCCChHHHHHHHHHHH-----------hhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-C
Q 021116 113 GGKARRKKLLSPKGM---DVRPMMEVVKGAAFDIL-----------QSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G 177 (317)
Q Consensus 113 ~G~~~G~~l~~p~~~---~~rpt~~~v~~alf~~L-----------~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-G 177 (317)
.|...|..+.++.+. ..||+++.+.+.+.... ..... ..++.+|||+|||+|.+++.+++. +
T Consensus 59 ~g~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~la~~~~ 135 (277)
T 1o54_A 59 FEKGPGEIIRTSAGKKGYILIPSLIDEIMNMKRRTQIVYPKDSSFIAMMLD---VKEGDRIIDTGVGSGAMCAVLARAVG 135 (277)
T ss_dssp TTSCTTCEEECTTCCEEEEECCCHHHHHHTCCC-CCCCCHHHHHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHTT
T ss_pred cCCCCCcEEEEcCCcEEEEeCCCHHHHHhhccccCCccCHHHHHHHHHHhC---CCCCCEEEEECCcCCHHHHHHHHHhC
Confidence 356678888887764 24888887665432211 00000 135789999999999999998876 5
Q ss_pred -CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHc
Q 021116 178 -CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKS 256 (317)
Q Consensus 178 -a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~ 256 (317)
..+|+++|+++.++ +.|++|++.+++.++++++.+|+.+.+ ..+.||+|++|+|... ..++.+.
T Consensus 136 ~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D~V~~~~~~~~----~~l~~~~-- 200 (277)
T 1o54_A 136 SSGKVFAYEKREEFA-KLAESNLTKWGLIERVTIKVRDISEGF--------DEKDVDALFLDVPDPW----NYIDKCW-- 200 (277)
T ss_dssp TTCEEEEECCCHHHH-HHHHHHHHHTTCGGGEEEECCCGGGCC--------SCCSEEEEEECCSCGG----GTHHHHH--
T ss_pred CCcEEEEEECCHHHH-HHHHHHHHHcCCCCCEEEEECCHHHcc--------cCCccCEEEECCcCHH----HHHHHHH--
Confidence 46899999999999 999999999998667999999987752 2367999999998643 3344443
Q ss_pred CCcCCCeEEEEEeCCC
Q 021116 257 ALVGKDSFIVVEYPLR 272 (317)
Q Consensus 257 ~lLkpgG~ivv~~~~~ 272 (317)
++|+|||++++..+..
T Consensus 201 ~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 201 EALKGGGRFATVCPTT 216 (277)
T ss_dssp HHEEEEEEEEEEESSH
T ss_pred HHcCCCCEEEEEeCCH
Confidence 3689999999988754
No 55
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.53 E-value=1.8e-13 Score=119.36 Aligned_cols=118 Identities=22% Similarity=0.209 Sum_probs=89.0
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
.++...+.+.+...+.... ..++.+|||+|||+|.+++.++..|..+|+++|+|+.++ +.+++|++.+++ +++
T Consensus 28 ~~~~~~~~~~l~~~~~~~~----~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~--~~~ 100 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLG----DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAV-DVLIENLGEFKG--KFK 100 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTT----SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHTGGGTT--SEE
T ss_pred ecCchHHHHHHHHHHHHcC----CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHHHcCC--CEE
Confidence 4455666666666554321 146789999999999999998888877899999999999 999999999987 599
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++++|+.++ ..+||+|++||||+.. .....++.+.. ++ |+ +++.+
T Consensus 101 ~~~~d~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~--~l--~~-~~~~~ 148 (207)
T 1wy7_A 101 VFIGDVSEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFE--IS--DV-VYSIH 148 (207)
T ss_dssp EEESCGGGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHH--HC--SE-EEEEE
T ss_pred EEECchHHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHH--hc--Cc-EEEEE
Confidence 999998774 2589999999999753 23445555543 34 55 44444
No 56
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.52 E-value=5.2e-14 Score=126.36 Aligned_cols=104 Identities=10% Similarity=0.119 Sum_probs=86.2
Q ss_pred CCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCC-CceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 156 PGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~-~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
+.+|||+|||+|..++.++.. + ..+|++||+++.++ +.|++|++.+|+. ++++++.+|+.+++..+ ..++|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~-----~~~~f 130 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQ-RQAKALFREAGYSPSRVRFLLSRPLDVMSRL-----ANDSY 130 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHH-HHHHHHHHHTTCCGGGEEEECSCHHHHGGGS-----CTTCE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh-----cCCCc
Confidence 449999999999999987763 2 45899999999999 9999999999998 78999999998876432 14789
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+||+|.+. ..+...++.+. ++|+|||++++..
T Consensus 131 D~V~~d~~~--~~~~~~l~~~~--~~LkpGG~lv~dn 163 (221)
T 3dr5_A 131 QLVFGQVSP--MDLKALVDAAW--PLLRRGGALVLAD 163 (221)
T ss_dssp EEEEECCCT--TTHHHHHHHHH--HHEEEEEEEEETT
T ss_pred CeEEEcCcH--HHHHHHHHHHH--HHcCCCcEEEEeC
Confidence 999999854 45677777665 4899999999854
No 57
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=1.3e-13 Score=119.99 Aligned_cols=139 Identities=16% Similarity=0.068 Sum_probs=101.9
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
||.++.+.+.+++.+.... ..++.+|||+|||+|.+++.++.. +..+|+++|+++.++ +.+++|++.+++.+ +
T Consensus 44 ~~~~~~~~~~~~~~l~~~~----~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~-v 117 (207)
T 1jsx_A 44 RDPNEMLVRHILDSIVVAP----YLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV-RFLRQVQHELKLEN-I 117 (207)
T ss_dssp ----CHHHHHHHHHHHHGG----GCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHTTCSS-E
T ss_pred CCHHHHHHHHHHhhhhhhh----hcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-e
Confidence 6766777777777775420 024789999999999999988765 345899999999999 99999999999876 9
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC--CccccCCCeEEEE
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT--DMLDTCGCLVKIK 286 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~--~l~~~~~~~~~~~ 286 (317)
+++++|+.++. ..++||+|+++. ...+...++.+. ++|+|||++++...... .+.....+|...+
T Consensus 118 ~~~~~d~~~~~--------~~~~~D~i~~~~---~~~~~~~l~~~~--~~L~~gG~l~~~~~~~~~~~~~~~~~g~~~~~ 184 (207)
T 1jsx_A 118 EPVQSRVEEFP--------SEPPFDGVISRA---FASLNDMVSWCH--HLPGEQGRFYALKGQMPEDEIALLPEEYQVES 184 (207)
T ss_dssp EEEECCTTTSC--------CCSCEEEEECSC---SSSHHHHHHHHT--TSEEEEEEEEEEESSCCHHHHHTSCTTEEEEE
T ss_pred EEEecchhhCC--------ccCCcCEEEEec---cCCHHHHHHHHH--HhcCCCcEEEEEeCCCchHHHHHHhcCCceee
Confidence 99999987642 136899999874 235667777664 69999999999876543 2222334677655
Q ss_pred E
Q 021116 287 D 287 (317)
Q Consensus 287 ~ 287 (317)
.
T Consensus 185 ~ 185 (207)
T 1jsx_A 185 V 185 (207)
T ss_dssp E
T ss_pred e
Confidence 3
No 58
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.52 E-value=1e-14 Score=141.71 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++++|||+|||||.+++.|++.|+.+|++||.++ ++ +.|+++++.||+.++|+++++|+.++. ..++||
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~-~~a~~~~~~n~~~~~i~~i~~~~~~~~--------lpe~~D 151 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IW-QQAREVVRFNGLEDRVHVLPGPVETVE--------LPEQVD 151 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-TH-HHHHHHHHHTTCTTTEEEEESCTTTCC--------CSSCEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HH-HHHHHHHHHcCCCceEEEEeeeeeeec--------CCcccc
Confidence 46899999999999999999999999999999997 66 899999999999999999999998752 136899
Q ss_pred EEEECCCCCC----ccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 234 YMSVTPPYTA----VDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 234 lV~~dPPy~~----~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|++++.-.. +.++.++.... ++|+|||+++-.
T Consensus 152 vivsE~~~~~l~~e~~l~~~l~a~~--r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 152 AIVSEWMGYGLLHESMLSSVLHART--KWLKEGGLLLPA 188 (376)
T ss_dssp EEECCCCBTTBTTTCSHHHHHHHHH--HHEEEEEEEESC
T ss_pred EEEeecccccccccchhhhHHHHHH--hhCCCCceECCc
Confidence 9999764211 23444444433 589999998743
No 59
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.52 E-value=1.5e-13 Score=126.81 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=85.9
Q ss_pred CCCCeEEEECCCcchHHHHHHH--cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAIS--RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas--~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|..++.++. .+..+|+++|+++.++ +.+++|++.+|+. +++++++|+.++..... ...+.
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l-~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~---~~~~~ 156 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRT-KALKSNINRMGVL-NTIIINADMRKYKDYLL---KNEIF 156 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESCHHHHHHHHH---HTTCC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHH-HHHHHHHHHhCCC-cEEEEeCChHhcchhhh---hcccc
Confidence 3678999999999999988776 3446899999999999 9999999999986 59999999988754220 01368
Q ss_pred ccEEEECCCCCC-c------------------cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 232 FDYMSVTPPYTA-V------------------DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 232 fDlV~~dPPy~~-~------------------~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
||+|++||||.. + ....+++.+. ++|+|||++++++-+
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGI--DLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHH--HHEEEEEEEEEEESC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHH--HhCCCCCEEEEEECC
Confidence 999999999853 1 1244455443 489999999886543
No 60
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.52 E-value=1.4e-14 Score=137.93 Aligned_cols=136 Identities=14% Similarity=0.163 Sum_probs=105.3
Q ss_pred ceEEecCCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHH
Q 021116 118 RKKLLSPKGMDVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLI 196 (317)
Q Consensus 118 G~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar 196 (317)
+..+...++.+.++..+...+.+.+.+.. ..+.+|||+|||+|.+++.++..+. .+|+++|+++.++ +.++
T Consensus 166 ~~~~~~~~gvf~~~~~d~~~~~ll~~l~~-------~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l-~~a~ 237 (343)
T 2pjd_A 166 GLTVKTLPGVFSRDGLDVGSQLLLSTLTP-------HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAV-EASR 237 (343)
T ss_dssp TEEEEECTTCTTSSSCCHHHHHHHHHSCT-------TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHH-HHHH
T ss_pred ceEEEecCCccCCCCCcHHHHHHHHhcCc-------CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHH-HHHH
Confidence 45566677777777777777777777643 2467999999999999999888764 3799999999999 9999
Q ss_pred HhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---H---HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 197 PNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---Y---EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 197 ~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---~---~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.+++. ++++.+|+.++. .++||+|+++|||+.+. . ...++.+ .++|+|||.+++..+
T Consensus 238 ~~~~~~~~~--~~~~~~d~~~~~---------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~--~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 238 ATLAANGVE--GEVFASNVFSEV---------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGA--VRHLNSGGELRIVAN 304 (343)
T ss_dssp HHHHHTTCC--CEEEECSTTTTC---------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHH--GGGEEEEEEEEEEEE
T ss_pred HHHHHhCCC--CEEEEccccccc---------cCCeeEEEECCCcccCccCCHHHHHHHHHHH--HHhCCCCcEEEEEEc
Confidence 999998875 567899987642 46899999999997531 2 3334443 479999999999877
Q ss_pred CCCC
Q 021116 271 LRTD 274 (317)
Q Consensus 271 ~~~~ 274 (317)
....
T Consensus 305 ~~~~ 308 (343)
T 2pjd_A 305 AFLP 308 (343)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 5543
No 61
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.51 E-value=7.9e-14 Score=129.32 Aligned_cols=153 Identities=13% Similarity=0.083 Sum_probs=105.4
Q ss_pred cccceEEEEeeeecceEEecCCCC-CCCCChHHHHHHHHHHH-hhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCE
Q 021116 104 TTHRLLQVLGGKARRKKLLSPKGM-DVRPMMEVVKGAAFDIL-QSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSE 180 (317)
Q Consensus 104 ~~~~il~ii~G~~~G~~l~~p~~~-~~rpt~~~v~~alf~~L-~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~ 180 (317)
...+-++++.+...|+.+..+... +.........+.++... ... ..+.+|||+|||+|.++.++++. +..+
T Consensus 28 s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~ 101 (275)
T 1iy9_A 28 TEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTH------PNPEHVLVVGGGDGGVIREILKHPSVKK 101 (275)
T ss_dssp CSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHS------SSCCEEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhC------CCCCEEEEECCchHHHHHHHHhCCCCce
Confidence 334556676666666766655211 11111112445555432 111 35789999999999999999887 6679
Q ss_pred EEEEeCCHHHHHHHHHHhHHHh--CC-CCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc-----HHHHHHH
Q 021116 181 VHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD-----YEVLMAQ 252 (317)
Q Consensus 181 V~aVDin~~al~~~ar~N~~~~--gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~-----~~~~l~~ 252 (317)
|++||+|+.++ +.|++|+... ++ .++++++.+|+.+++... .++||+|++|+|+.... ..+.++.
T Consensus 102 v~~vEid~~~v-~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~ 174 (275)
T 1iy9_A 102 ATLVDIDGKVI-EYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------ENQYDVIMVDSTEPVGPAVNLFTKGFYAG 174 (275)
T ss_dssp EEEEESCHHHH-HHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------CSCEEEEEESCSSCCSCCCCCSTTHHHHH
T ss_pred EEEEECCHHHH-HHHHHHhHhhccccCCCceEEEECcHHHHHhhC------CCCeeEEEECCCCCCCcchhhhHHHHHHH
Confidence 99999999999 9999998652 34 357999999999887532 46899999999864221 1455666
Q ss_pred HHHcCCcCCCeEEEEEeCC
Q 021116 253 ISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 253 L~~~~lLkpgG~ivv~~~~ 271 (317)
+. ++|+|||++++....
T Consensus 175 ~~--~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 175 IA--KALKEDGIFVAQTDN 191 (275)
T ss_dssp HH--HHEEEEEEEEEECCC
T ss_pred HH--HhcCCCcEEEEEcCC
Confidence 54 479999999998643
No 62
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.51 E-value=3.1e-13 Score=122.70 Aligned_cols=108 Identities=14% Similarity=0.087 Sum_probs=88.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++.. + ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+.... ..++|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~----~~~~f 137 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHA-QVARENLQLAGVDQRVTLREGPALQSLESLG----ECPAF 137 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHTCC----SCCCC
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC----CCCCe
Confidence 5789999999999999988765 2 45899999999999 9999999999998889999999988765431 12489
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+|++|.+ ...+...++.+. ++|+|||++++....
T Consensus 138 D~V~~d~~--~~~~~~~l~~~~--~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 138 DLIFIDAD--KPNNPHYLRWAL--RYSRPGTLIIGDNVV 172 (248)
T ss_dssp SEEEECSC--GGGHHHHHHHHH--HTCCTTCEEEEECCS
T ss_pred EEEEECCc--hHHHHHHHHHHH--HhcCCCeEEEEeCCC
Confidence 99999985 345667777765 489999999987553
No 63
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.51 E-value=6.5e-14 Score=127.87 Aligned_cols=140 Identities=18% Similarity=0.137 Sum_probs=102.0
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCc
Q 021116 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (317)
Q Consensus 128 ~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~ 207 (317)
.+++++..+.+.+-..+ .++.+|||+|||+|.+++.+++.|+ +|+++|+|+.++ +.+++|++.+++.
T Consensus 102 g~~~tt~~~~~~l~~~~---------~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v-~~a~~n~~~~~~~-- 168 (254)
T 2nxc_A 102 GHHETTRLALKALARHL---------RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVL-PQAEANAKRNGVR-- 168 (254)
T ss_dssp CCSHHHHHHHHHHHHHC---------CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGH-HHHHHHHHHTTCC--
T ss_pred CCCHHHHHHHHHHHHhc---------CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHH-HHHHHHHHHcCCc--
Confidence 34666665555543321 3578999999999999999888887 899999999999 9999999999885
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCccc-----cCCCe
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDMLD-----TCGCL 282 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~-----~~~~~ 282 (317)
++++.+|+.+.+. .++||+|++|+++. .+..++..+. ++|+|||++++.........+ ...||
T Consensus 169 v~~~~~d~~~~~~--------~~~fD~Vv~n~~~~--~~~~~l~~~~--~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 169 PRFLEGSLEAALP--------FGPFDLLVANLYAE--LHAALAPRYR--EALVPGGRALLTGILKDRAPLVREAMAGAGF 236 (254)
T ss_dssp CEEEESCHHHHGG--------GCCEEEEEEECCHH--HHHHHHHHHH--HHEEEEEEEEEEEEEGGGHHHHHHHHHHTTC
T ss_pred EEEEECChhhcCc--------CCCCCEEEECCcHH--HHHHHHHHHH--HHcCCCCEEEEEeeccCCHHHHHHHHHHCCC
Confidence 8899999887431 36899999997542 3445555554 479999999987543333221 13567
Q ss_pred EEEEEeecCc
Q 021116 283 VKIKDRRFGR 292 (317)
Q Consensus 283 ~~~~~r~yG~ 292 (317)
.+.+....++
T Consensus 237 ~~~~~~~~~~ 246 (254)
T 2nxc_A 237 RPLEEAAEGE 246 (254)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEeccCC
Confidence 7765544443
No 64
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.51 E-value=1.5e-13 Score=125.14 Aligned_cols=110 Identities=11% Similarity=0.087 Sum_probs=88.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++.. . ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+++..+..-....++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENY-ELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 5679999999999999987764 2 35899999999999 9999999999998789999999988765431000003689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+||+|.+ ...+...++.+. ++|+|||++++..
T Consensus 158 D~V~~d~~--~~~~~~~l~~~~--~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD--KDNYLNYHKRLI--DLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC--STTHHHHHHHHH--HHBCTTCCEEEEC
T ss_pred EEEEEcCc--hHHHHHHHHHHH--HhCCCCeEEEEec
Confidence 99999975 346777777765 4899999999875
No 65
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.51 E-value=1e-13 Score=125.91 Aligned_cols=125 Identities=11% Similarity=0.104 Sum_probs=97.7
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
.|........++..+.. ..++.+|||+|||+|.+++.++..+..+|+++|+++.++ +.|++|++..|+.++++
T Consensus 27 ~~~~~~~~~~~l~~l~~------~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~ 99 (267)
T 3kkz_A 27 GPGSPEVTLKALSFIDN------LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFI-DIFNRNARQSGLQNRVT 99 (267)
T ss_dssp SSCCHHHHHHHHTTCCC------CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEE
T ss_pred CCCCHHHHHHHHHhccc------CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHH-HHHHHHHHHcCCCcCcE
Confidence 44444444444444431 146789999999999999998888666899999999999 99999999999988899
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++.+|+.++. ...++||+|++..++...+....++.+. ++|+|||++++...
T Consensus 100 ~~~~d~~~~~-------~~~~~fD~i~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 100 GIVGSMDDLP-------FRNEELDLIWSEGAIYNIGFERGLNEWR--KYLKKGGYLAVSEC 151 (267)
T ss_dssp EEECCTTSCC-------CCTTCEEEEEESSCGGGTCHHHHHHHHG--GGEEEEEEEEEEEE
T ss_pred EEEcChhhCC-------CCCCCEEEEEEcCCceecCHHHHHHHHH--HHcCCCCEEEEEEe
Confidence 9999986531 2357899999987754446677777765 58999999998764
No 66
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.49 E-value=3.6e-13 Score=124.69 Aligned_cols=127 Identities=14% Similarity=0.117 Sum_probs=90.6
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeC-CHHHHHHHHHHhH-----HHhC
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM-DPWVVSNVLIPNL-----EWTG 203 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi-n~~al~~~ar~N~-----~~~g 203 (317)
.|.+..+.+.+...... .++.+|||+|||+|.+++.+++.|+.+|+++|+ ++.++ +.|++|+ +.++
T Consensus 61 ~~~~~~l~~~l~~~~~~-------~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~-~~a~~n~~~N~~~~~~ 132 (281)
T 3bzb_A 61 WSGARALADTLCWQPEL-------IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEIL-NSLESNIREHTANSCS 132 (281)
T ss_dssp -CHHHHHHHHHHHCGGG-------TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHH-HHHHHHHHTTCC----
T ss_pred ecHHHHHHHHHHhcchh-------cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHH-HHHHHHHHHhhhhhcc
Confidence 35556566555544322 357899999999999999988888778999999 89999 9999999 5566
Q ss_pred CC----CceEEEEecHHH----HHHHHhhhcCCCCCccEEEE-CCCCCCccHHHHHHHHHHcCCcC---C--CeEEEEEe
Q 021116 204 FL----DVSSIHTVRVET----FLERAEQFVGKDGPFDYMSV-TPPYTAVDYEVLMAQISKSALVG---K--DSFIVVEY 269 (317)
Q Consensus 204 l~----~~v~ii~gD~~~----~l~~~~~~~~~~~~fDlV~~-dPPy~~~~~~~~l~~L~~~~lLk---p--gG~ivv~~ 269 (317)
+. ++++++..|+.+ ..... ..++||+|++ |..|....+..+++.+.. +|+ | ||++++.+
T Consensus 133 ~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~--~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 133 SETVKRASPKVVPYRWGDSPDSLQRCT-----GLQRFQVVLLADLLSFHQAHDALLRSVKM--LLALPANDPTAVALVTF 205 (281)
T ss_dssp ------CCCEEEECCTTSCTHHHHHHH-----SCSSBSEEEEESCCSCGGGHHHHHHHHHH--HBCCTTTCTTCEEEEEE
T ss_pred cccCCCCCeEEEEecCCCccHHHHhhc-----cCCCCCEEEEeCcccChHHHHHHHHHHHH--HhcccCCCCCCEEEEEE
Confidence 54 468888655432 22111 1368999996 998887778888888763 788 9 99887766
Q ss_pred CC
Q 021116 270 PL 271 (317)
Q Consensus 270 ~~ 271 (317)
..
T Consensus 206 ~~ 207 (281)
T 3bzb_A 206 TH 207 (281)
T ss_dssp CC
T ss_pred Ee
Confidence 54
No 67
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.49 E-value=1.9e-13 Score=123.19 Aligned_cols=106 Identities=15% Similarity=0.199 Sum_probs=86.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|.+++.++.. + ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+ ..++
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~ 162 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFA-KLAWENIKWAGFDDRVTIKLKDIYEGI--------EEEN 162 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHHTCTTTEEEECSCGGGCC--------CCCS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHH-HHHHHHHHHcCCCCceEEEECchhhcc--------CCCC
Confidence 46889999999999999998876 4 56899999999999 999999999999888999999988642 2467
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
||+|++|+|... ..++.+. +.|+|||++++..+....
T Consensus 163 ~D~v~~~~~~~~----~~l~~~~--~~L~~gG~l~~~~~~~~~ 199 (255)
T 3mb5_A 163 VDHVILDLPQPE----RVVEHAA--KALKPGGFFVAYTPCSNQ 199 (255)
T ss_dssp EEEEEECSSCGG----GGHHHHH--HHEEEEEEEEEEESSHHH
T ss_pred cCEEEECCCCHH----HHHHHHH--HHcCCCCEEEEEECCHHH
Confidence 999999998542 2344443 368999999998765433
No 68
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.49 E-value=6.8e-14 Score=127.14 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=89.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++.. + ..+|++||+++.++ +.|++|++.+|+.++++++.+|+.+.+..+.. .+..++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~-~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRLGPALDTLHSLLN-EGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEESCHHHHHHHHHH-HHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhh-ccCCCCE
Confidence 4679999999999999988763 2 35899999999999 99999999999988899999999887755310 0013689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+||+|.+ ...+...++.+. ++|+|||++++....
T Consensus 138 D~V~~d~~--~~~~~~~l~~~~--~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 138 DFIFIDAD--KTNYLNYYELAL--KLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEEESC--GGGHHHHHHHHH--HHEEEEEEEEEECSS
T ss_pred eEEEEcCC--hHHhHHHHHHHH--HhcCCCeEEEEECCc
Confidence 99999986 345667777665 489999999996543
No 69
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.49 E-value=4.9e-13 Score=118.35 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=88.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.+++. + ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+..+.. ....++|
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~-~~~~~~~ 146 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPP-ELGRPLWRQAEAEHKIDLRLKPALETLDELLA-AGEAGTF 146 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHH-HHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-TTCTTCE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHh-cCCCCCc
Confidence 5789999999999999988764 2 45899999999999 99999999999987899999999887654320 0001579
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|++|++. ..+...++.+. ++|+|||++++...
T Consensus 147 D~v~~d~~~--~~~~~~l~~~~--~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 147 DVAVVDADK--ENCSAYYERCL--QLLRPGGILAVLRV 180 (229)
T ss_dssp EEEEECSCS--TTHHHHHHHHH--HHEEEEEEEEEECC
T ss_pred cEEEECCCH--HHHHHHHHHHH--HHcCCCeEEEEECC
Confidence 999999873 35677777765 48999999998653
No 70
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.49 E-value=1.7e-13 Score=122.91 Aligned_cols=125 Identities=13% Similarity=0.076 Sum_probs=97.6
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCc
Q 021116 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (317)
Q Consensus 128 ~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~ 207 (317)
..+|......+.+.+.+.. .++.+|||+|||+|.+++.++.....+|+++|+++.++ +.|++|++..|+.++
T Consensus 16 ~~~~~~~~~~~~l~~~~~~-------~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~ 87 (256)
T 1nkv_A 16 IHNPFTEEKYATLGRVLRM-------KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFT-AQAKRRAEELGVSER 87 (256)
T ss_dssp SSSSCCHHHHHHHHHHTCC-------CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHH-HHHHHHHHHTTCTTT
T ss_pred ccCCCCHHHHHHHHHhcCC-------CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHH-HHHHHHHHhcCCCcc
Confidence 3467777777777666643 46789999999999999988775334799999999999 999999999998778
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCC-CCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP-YTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPP-y~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++++++|+.+.. . +++||+|++... +...+....++.+. ++|+|||++++..+
T Consensus 88 v~~~~~d~~~~~-------~-~~~fD~V~~~~~~~~~~~~~~~l~~~~--r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 88 VHFIHNDAAGYV-------A-NEKCDVAACVGATWIAGGFAGAEELLA--QSLKPGGIMLIGEP 141 (256)
T ss_dssp EEEEESCCTTCC-------C-SSCEEEEEEESCGGGTSSSHHHHHHHT--TSEEEEEEEEEEEE
T ss_pred eEEEECChHhCC-------c-CCCCCEEEECCChHhcCCHHHHHHHHH--HHcCCCeEEEEecC
Confidence 999999987642 1 478999998433 23335566677664 69999999998754
No 71
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.48 E-value=4.1e-13 Score=121.22 Aligned_cols=111 Identities=12% Similarity=0.101 Sum_probs=88.9
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
+..+|||+|||+|..++.+++. + ..+|+++|+++.++ +.|++|++..|+.++++++.+|+.+++..+..-....++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAY-EIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 5679999999999999987764 2 45899999999999 9999999999998789999999998765441000013689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+||+|.+ ...+...++.+. ++|+|||++++...
T Consensus 149 D~I~~d~~--~~~~~~~l~~~~--~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDAD--KPNYIKYHERLM--KLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECSC--GGGHHHHHHHHH--HHEEEEEEEEEECT
T ss_pred CEEEECCc--hHHHHHHHHHHH--HhcCCCeEEEEecC
Confidence 99999974 346777777765 48999999998753
No 72
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.48 E-value=1.8e-13 Score=120.13 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=85.6
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.+++. + ..+|+++|+++.++ +.|++|++.+++.++++++.+|+.+.+... .+ |
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~-f 127 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNV-EHARRMLHDNGLIDRVELQVGDPLGIAAGQ------RD-I 127 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHSGGGGEEEEESCHHHHHTTC------CS-E
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHCCCCceEEEEEecHHHHhccC------CC-C
Confidence 4679999999999999988765 2 35899999999999 999999999998878999999998765322 35 9
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+|++|.+ ...+...++.+. ++|+|||++++..
T Consensus 128 D~v~~~~~--~~~~~~~l~~~~--~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 128 DILFMDCD--VFNGADVLERMN--RCLAKNALLIAVN 160 (210)
T ss_dssp EEEEEETT--TSCHHHHHHHHG--GGEEEEEEEEEES
T ss_pred CEEEEcCC--hhhhHHHHHHHH--HhcCCCeEEEEEC
Confidence 99999964 346777777775 5899999999864
No 73
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.48 E-value=3.8e-13 Score=124.86 Aligned_cols=148 Identities=15% Similarity=0.107 Sum_probs=101.0
Q ss_pred cceEEEEeeeecceEEecCCCC-CCCCChHHHHHHHHHH-HhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEE
Q 021116 106 HRLLQVLGGKARRKKLLSPKGM-DVRPMMEVVKGAAFDI-LQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHF 183 (317)
Q Consensus 106 ~~il~ii~G~~~G~~l~~p~~~-~~rpt~~~v~~alf~~-L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~a 183 (317)
.+-++++.+...|+.+...... ..........+.+... +... ..+.+|||+|||+|.++.++++.+..+|++
T Consensus 30 ~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~ 103 (281)
T 1mjf_A 30 YQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAH------PKPKRVLVIGGGDGGTVREVLQHDVDEVIM 103 (281)
T ss_dssp SCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHS------SCCCEEEEEECTTSHHHHHHTTSCCSEEEE
T ss_pred CccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhC------CCCCeEEEEcCCcCHHHHHHHhCCCCEEEE
Confidence 3445666666566666554211 1111111233444432 1111 356899999999999999988877679999
Q ss_pred EeCCHHHHHHHHHHhHHHh--CC--------CCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc-----HHH
Q 021116 184 VEMDPWVVSNVLIPNLEWT--GF--------LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD-----YEV 248 (317)
Q Consensus 184 VDin~~al~~~ar~N~~~~--gl--------~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~-----~~~ 248 (317)
||+|+.++ +.|++|+ .. ++ .++++++.+|+.+++.. .++||+|++|+|...+. ..+
T Consensus 104 vDid~~~i-~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-------~~~fD~Ii~d~~~~~~~~~~l~~~~ 174 (281)
T 1mjf_A 104 VEIDEDVI-MVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-------NRGFDVIIADSTDPVGPAKVLFSEE 174 (281)
T ss_dssp EESCHHHH-HHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-------CCCEEEEEEECCCCC-----TTSHH
T ss_pred EECCHHHH-HHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-------cCCeeEEEECCCCCCCcchhhhHHH
Confidence 99999999 9999998 43 33 35799999999887653 26899999999864221 245
Q ss_pred HHHHHHHcCCcCCCeEEEEEeC
Q 021116 249 LMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 249 ~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.++.+. ++|+|||++++...
T Consensus 175 ~l~~~~--~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 175 FYRYVY--DALNNPGIYVTQAG 194 (281)
T ss_dssp HHHHHH--HHEEEEEEEEEEEE
T ss_pred HHHHHH--HhcCCCcEEEEEcC
Confidence 566654 48999999999754
No 74
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.48 E-value=3.3e-13 Score=132.53 Aligned_cols=125 Identities=14% Similarity=0.045 Sum_probs=93.9
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHH-------Hh
Q 021116 131 PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLE-------WT 202 (317)
Q Consensus 131 pt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~-------~~ 202 (317)
++...+...+++.+.. .++.+|||||||+|.+++.++. .|+.+|+|||+++.++ ++|++|++ .+
T Consensus 156 Et~~~~i~~il~~l~l-------~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~l-elAr~n~e~frkr~~~~ 227 (438)
T 3uwp_A 156 ETSFDLVAQMIDEIKM-------TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPA-KYAETMDREFRKWMKWY 227 (438)
T ss_dssp GTHHHHHHHHHHHHCC-------CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCC-------CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHHHHHHHHh
Confidence 4555666667666643 4688999999999999998775 5776799999999998 99998763 45
Q ss_pred CCC-CceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 203 GFL-DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 203 gl~-~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+. ++++++++|+.+...... -..||+||++++|...+....+..+. +.|+|||+|++...
T Consensus 228 Gl~~~rVefi~GD~~~lp~~d~-----~~~aDVVf~Nn~~F~pdl~~aL~Ei~--RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 228 GKKHAEYTLERGDFLSEEWRER-----IANTSVIFVNNFAFGPEVDHQLKERF--ANMKEGGRIVSSKP 289 (438)
T ss_dssp TBCCCEEEEEECCTTSHHHHHH-----HHTCSEEEECCTTCCHHHHHHHHHHH--TTSCTTCEEEESSC
T ss_pred CCCCCCeEEEECcccCCccccc-----cCCccEEEEcccccCchHHHHHHHHH--HcCCCCcEEEEeec
Confidence 763 679999999876532110 04699999999876555555555543 69999999998643
No 75
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.48 E-value=2.9e-13 Score=121.23 Aligned_cols=110 Identities=8% Similarity=0.052 Sum_probs=88.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+.+|||+|||+|.+++.++... ...|++||+++.++ +.|++|++.+++.+ ++++++|+.+++... ..+++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l-~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~----~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGV-GACLASAHEEGLSN-LRVMCHDAVEVLHKM----IPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHTTCSS-EEEECSCHHHHHHHH----SCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHH-HHHHHHHHHhCCCc-EEEEECCHHHHHHHH----cCCCChh
Confidence 46799999999999999887764 35799999999999 99999999999865 999999999876532 1357899
Q ss_pred EEEEC--CCCCCccH-------HHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVT--PPYTAVDY-------EVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~d--PPy~~~~~-------~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
.|+++ +||..... ...++.+. ++|+|||++++.++..
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~--r~LkpGG~l~i~td~~ 153 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVK--SKLQLGGVFHMATDWE 153 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHH--HHEEEEEEEEEEESCH
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHH--HHcCCCcEEEEEeCCH
Confidence 99987 56544321 24666665 4899999999998754
No 76
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.47 E-value=1.1e-13 Score=125.62 Aligned_cols=124 Identities=11% Similarity=0.053 Sum_probs=92.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++..| +.+|+++|+|+.++ +.|++|++.+|+.++++++.+|+.+.+.. .+.|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-------~~~~ 85 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPY-QSAVKNVEAHGLKEKIQVRLANGLAAFEE-------TDQV 85 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEECchhhhccc-------CcCC
Confidence 357899999999999999999887 56899999999999 99999999999998999999998764311 1269
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC-ccc--cCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTD-MLD--TCGCLVKIKDR 288 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~-l~~--~~~~~~~~~~r 288 (317)
|+|++... +...+.++++... ..|+++|+++++...... +.. ...||.+.++.
T Consensus 86 D~IviaG~-Gg~~i~~Il~~~~--~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 86 SVITIAGM-GGRLIARILEEGL--GKLANVERLILQPNNREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp CEEEEEEE-CHHHHHHHHHHTG--GGCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEcCC-ChHHHHHHHHHHH--HHhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEE
Confidence 98887421 1112344444433 578999999998764322 111 24678887764
No 77
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.47 E-value=3.1e-13 Score=126.51 Aligned_cols=153 Identities=12% Similarity=0.061 Sum_probs=101.9
Q ss_pred cccceEEEEeeeecceEEecCCCC-CCCCChHHHHHHHHHHH-hhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCE
Q 021116 104 TTHRLLQVLGGKARRKKLLSPKGM-DVRPMMEVVKGAAFDIL-QSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSE 180 (317)
Q Consensus 104 ~~~~il~ii~G~~~G~~l~~p~~~-~~rpt~~~v~~alf~~L-~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~ 180 (317)
+..+-++++.+...|+.+...... +.++......+.+.... ... ..+.+|||+|||+|.++.++++. +..+
T Consensus 43 s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~ 116 (296)
T 1inl_A 43 SDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLH------PNPKKVLIIGGGDGGTLREVLKHDSVEK 116 (296)
T ss_dssp CSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHS------SSCCEEEEEECTTCHHHHHHTTSTTCSE
T ss_pred CCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcC------CCCCEEEEEcCCcCHHHHHHHhcCCCCE
Confidence 334455666666667766665322 12222222334443321 111 34689999999999999999886 5678
Q ss_pred EEEEeCCHHHHHHHHHHhHHH--hCC-CCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-Cc-----cHHHHHH
Q 021116 181 VHFVEMDPWVVSNVLIPNLEW--TGF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-AV-----DYEVLMA 251 (317)
Q Consensus 181 V~aVDin~~al~~~ar~N~~~--~gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-~~-----~~~~~l~ 251 (317)
|++||+|+.++ +.|++|+.. .++ .++++++.+|+.+++.. ..++||+|++|+|.. .+ ...+.++
T Consensus 117 v~~vDid~~~~-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~------~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~ 189 (296)
T 1inl_A 117 AILCEVDGLVI-EAARKYLKQTSCGFDDPRAEIVIANGAEYVRK------FKNEFDVIIIDSTDPTAGQGGHLFTEEFYQ 189 (296)
T ss_dssp EEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG------CSSCEEEEEEEC----------CCSHHHHH
T ss_pred EEEEECCHHHH-HHHHHHhHhhccccCCCceEEEECcHHHHHhh------CCCCceEEEEcCCCcccCchhhhhHHHHHH
Confidence 99999999999 999999865 233 35799999999887532 246799999998753 21 1245566
Q ss_pred HHHHcCCcCCCeEEEEEeCC
Q 021116 252 QISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 252 ~L~~~~lLkpgG~ivv~~~~ 271 (317)
.+. ++|+|||++++....
T Consensus 190 ~~~--~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 190 ACY--DALKEDGVFSAETED 207 (296)
T ss_dssp HHH--HHEEEEEEEEEECCC
T ss_pred HHH--HhcCCCcEEEEEccC
Confidence 654 489999999998543
No 78
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.46 E-value=1.4e-13 Score=132.93 Aligned_cols=105 Identities=12% Similarity=0.093 Sum_probs=86.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.++++|+.+|++||++ .++ +.|++|++.+++.++++++++|+.++. ..++||
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D 131 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMA-DHARALVKANNLDHIVEVIEGSVEDIS--------LPEKVD 131 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTH-HHHHHHHHHTTCTTTEEEEESCGGGCC--------CSSCEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHH-HHHHHHHHHcCCCCeEEEEECchhhcC--------cCCcce
Confidence 4689999999999999999999988899999999 898 999999999999988999999998752 126899
Q ss_pred EEEECCC-CCC---ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPP-YTA---VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPP-y~~---~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++++. |.. ...+.++..+. ++|+|||++++...
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~--~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARD--RWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHH--HHEEEEEEEESSEE
T ss_pred EEEEcChhhcccchHHHHHHHHHHH--hhCCCCeEEEEecC
Confidence 9999883 432 23555666554 48999999986543
No 79
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.46 E-value=4.5e-13 Score=119.48 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=87.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.+++.++... ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+.... ..++||
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----~~~~fD 128 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRY-EEAHKHVKALGLESRIELLFGDALQLGEKLE----LYPLFD 128 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHTTCTTTEEEECSCGGGSHHHHT----TSCCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECCHHHHHHhcc----cCCCcc
Confidence 57799999999999999887753 45899999999999 9999999999987789999999988654431 136899
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|++|++.. .+...++.+. ++|+|||++++..
T Consensus 129 ~I~~~~~~~--~~~~~l~~~~--~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 129 VLFIDAAKG--QYRRFFDMYS--PMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEGGGS--CHHHHHHHHG--GGEEEEEEEEEET
T ss_pred EEEECCCHH--HHHHHHHHHH--HHcCCCeEEEEEc
Confidence 999998753 5677777765 5899999999974
No 80
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.46 E-value=4.7e-13 Score=126.00 Aligned_cols=154 Identities=16% Similarity=0.130 Sum_probs=101.9
Q ss_pred ccccceEEEEeeeecceEEecCCCCC-CCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCE
Q 021116 103 RTTHRLLQVLGGKARRKKLLSPKGMD-VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSE 180 (317)
Q Consensus 103 ~~~~~il~ii~G~~~G~~l~~p~~~~-~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G-a~~ 180 (317)
....+-++|+.+.+.|+.+....... .... +.....++..+.... ...+.+|||+|||+|.++.++++.+ ..+
T Consensus 47 ~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~d-e~~y~e~l~~~~l~~----~~~~~~VLdiG~G~G~~~~~l~~~~~~~~ 121 (304)
T 2o07_A 47 RSRYQDILVFRSKTYGNVLVLDGVIQCTERD-EFSYQEMIANLPLCS----HPNPRKVLIIGGGDGGVLREVVKHPSVES 121 (304)
T ss_dssp ECSSSEEEEEEESSSCEEEEETTEEEEETTT-HHHHHHHHHHHHHTT----SSSCCEEEEEECTTSHHHHHHTTCTTCCE
T ss_pred ECCCcEEEEEEcCCCceEEEECCEEEeeccc-chHHHHHHHHHHHhh----CCCCCEEEEECCCchHHHHHHHHcCCCCE
Confidence 34445566777777787776652111 0111 222212222221110 1356899999999999999998764 568
Q ss_pred EEEEeCCHHHHHHHHHHhHHH--hCC-CCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc-----cHHHHHHH
Q 021116 181 VHFVEMDPWVVSNVLIPNLEW--TGF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-----DYEVLMAQ 252 (317)
Q Consensus 181 V~aVDin~~al~~~ar~N~~~--~gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-----~~~~~l~~ 252 (317)
|++||+|+.++ +.|++|+.. .++ .++++++.+|+.+++... .++||+||+|+|.... ...+.++.
T Consensus 122 v~~vDid~~~i-~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~ 194 (304)
T 2o07_A 122 VVQCEIDEDVI-QVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------QDAFDVIITDSSDPMGPAESLFKESYYQL 194 (304)
T ss_dssp EEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------SSCEEEEEEECC-----------CHHHHH
T ss_pred EEEEECCHHHH-HHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------CCCceEEEECCCCCCCcchhhhHHHHHHH
Confidence 99999999999 999999876 344 467999999999876532 4689999999876422 12345555
Q ss_pred HHHcCCcCCCeEEEEEeC
Q 021116 253 ISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 253 L~~~~lLkpgG~ivv~~~ 270 (317)
+. ++|+|||++++...
T Consensus 195 ~~--~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 195 MK--TALKEDGVLCCQGE 210 (304)
T ss_dssp HH--HHEEEEEEEEEEEE
T ss_pred HH--hccCCCeEEEEecC
Confidence 54 48999999999863
No 81
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.46 E-value=3.5e-13 Score=129.77 Aligned_cols=108 Identities=14% Similarity=0.082 Sum_probs=84.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+| |+|.++++++..+. .+|+++|+++.++ +.|++|++.+|+. +++++++|+.+.+.. ...++|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l-~~a~~~~~~~g~~-~v~~~~~D~~~~l~~-----~~~~~f 242 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLT-KFIEKAANEIGYE-DIEIFTFDLRKPLPD-----YALHKF 242 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHH-HHHHHHHHHHTCC-CEEEECCCTTSCCCT-----TTSSCB
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCC-CEEEEEChhhhhchh-----hccCCc
Confidence 3578999999 99999999888775 6899999999999 9999999999986 699999998773211 013579
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCe-EEEEEeCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDS-FIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG-~ivv~~~~ 271 (317)
|+|++||||........++.+. +.|+||| ++++++..
T Consensus 243 D~Vi~~~p~~~~~~~~~l~~~~--~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 243 DTFITDPPETLEAIRAFVGRGI--ATLKGPRCAGYFGITR 280 (373)
T ss_dssp SEEEECCCSSHHHHHHHHHHHH--HTBCSTTCEEEEEECT
T ss_pred cEEEECCCCchHHHHHHHHHHH--HHcccCCeEEEEEEec
Confidence 9999999997433344444443 5899999 54666554
No 82
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=3.3e-13 Score=118.95 Aligned_cols=108 Identities=10% Similarity=0.072 Sum_probs=85.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+.+|||+|||+|.+++.++... ..+|++||+++.++ +.|++|++.+++ ++++++++|+.++...+ ..++||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l-~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVL-SYALDKVLEVGV-PNIKLLWVDGSDLTDYF-----EDGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHCC-SSEEEEECCSSCGGGTS-----CTTCCS
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHH-HHHHHHHHHcCC-CCEEEEeCCHHHHHhhc-----CCCCCC
Confidence 47899999999999999888764 35899999999999 999999999998 46999999987642111 246799
Q ss_pred EEEECCCCCCc---------cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 234 YMSVTPPYTAV---------DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 234 lV~~dPPy~~~---------~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|++++|-... .+...++.+. ++|+|||++++++..
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFK--RILPENGEIHFKTDN 158 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHH--HHSCTTCEEEEEESC
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHH--HHcCCCcEEEEEeCC
Confidence 99999874321 2356677665 479999999998864
No 83
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.46 E-value=4.6e-13 Score=133.28 Aligned_cols=105 Identities=23% Similarity=0.203 Sum_probs=83.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|..++.++++ +..+|+++|+++.++ +.+++|++.+|+. ++++++|+.++.... .+.
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l-~~a~~n~~r~G~~--v~~~~~Da~~l~~~~------~~~ 170 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRV-RGLLENVERWGAP--LAVTQAPPRALAEAF------GTY 170 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHHCCC--CEEECSCHHHHHHHH------CSC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCe--EEEEECCHHHhhhhc------ccc
Confidence 46889999999999999988764 335899999999999 9999999999985 899999998875433 368
Q ss_pred ccEEEECCCCCC-cc---------------H-------HHHHHHHHHcCCcCCCeEEEEEe
Q 021116 232 FDYMSVTPPYTA-VD---------------Y-------EVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 232 fDlV~~dPPy~~-~~---------------~-------~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
||+|++||||.. +. . .++++.+ .++|+|||+++.++
T Consensus 171 FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a--~~~LkpGG~LvysT 229 (464)
T 3m6w_A 171 FHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQA--SRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHH--HTTEEEEEEEEEEE
T ss_pred CCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHH--HHhcCCCcEEEEEe
Confidence 999999999842 10 0 2233333 47999999987653
No 84
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.45 E-value=1.2e-12 Score=124.23 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=102.2
Q ss_pred ceEEEEeeeecceEEecCCCC-CCCCChHHHHHHHHHH-HhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEE
Q 021116 107 RLLQVLGGKARRKKLLSPKGM-DVRPMMEVVKGAAFDI-LQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHF 183 (317)
Q Consensus 107 ~il~ii~G~~~G~~l~~p~~~-~~rpt~~~v~~alf~~-L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~a 183 (317)
+-+.+....+.|+.+...... ..++......+.+... +... ..+.+|||+|||+|.+++++++. +..+|++
T Consensus 72 q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~ 145 (321)
T 2pt6_A 72 QNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVS------KEPKNVLVVGGGDGGIIRELCKYKSVENIDI 145 (321)
T ss_dssp CEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHS------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEE
T ss_pred ceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcC------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEE
Confidence 334455555667777654322 2333322223333332 1111 34689999999999999998876 4578999
Q ss_pred EeCCHHHHHHHHHHhHHH--hCC-CCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc----cH-HHHHHHHHH
Q 021116 184 VEMDPWVVSNVLIPNLEW--TGF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV----DY-EVLMAQISK 255 (317)
Q Consensus 184 VDin~~al~~~ar~N~~~--~gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~----~~-~~~l~~L~~ 255 (317)
||+|+.++ +.|++|+.. +++ .++++++.+|+.+++... .++||+|++|++-..+ .+ .+.++.+.
T Consensus 146 vDis~~~l-~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~- 217 (321)
T 2pt6_A 146 CEIDETVI-EVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TNTYDVIIVDSSDPIGPAETLFNQNFYEKIY- 217 (321)
T ss_dssp EESCHHHH-HHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CSCEEEEEEECCCSSSGGGGGSSHHHHHHHH-
T ss_pred EECCHHHH-HHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------CCCceEEEECCcCCCCcchhhhHHHHHHHHH-
Confidence 99999999 999999876 334 357999999999876542 4689999999842211 12 56666665
Q ss_pred cCCcCCCeEEEEEeCC
Q 021116 256 SALVGKDSFIVVEYPL 271 (317)
Q Consensus 256 ~~lLkpgG~ivv~~~~ 271 (317)
+.|+|||+++++...
T Consensus 218 -~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 218 -NALKPNGYCVAQCES 232 (321)
T ss_dssp -HHEEEEEEEEEEECC
T ss_pred -HhcCCCcEEEEEcCC
Confidence 489999999998653
No 85
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.44 E-value=1.8e-12 Score=116.43 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=88.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC--C
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD--G 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~--~ 230 (317)
++.+|||+|||+|..++.+++. + ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+..+. ..+ +
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~---~~~~~~ 147 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNAT-AIAKKYWQKAGVAEKISLRLGPALATLEQLT---QGKPLP 147 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEESCHHHHHHHHH---TSSSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH---hcCCCC
Confidence 4679999999999999988764 2 34899999999999 9999999999998789999999988765442 122 6
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+||+||+|.+ ...+...++.+. ++|+|||++++...
T Consensus 148 ~fD~V~~d~~--~~~~~~~l~~~~--~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 148 EFDLIFIDAD--KRNYPRYYEIGL--NLLRRGGLMVIDNV 183 (232)
T ss_dssp CEEEEEECSC--GGGHHHHHHHHH--HTEEEEEEEEEECT
T ss_pred CcCEEEECCC--HHHHHHHHHHHH--HHcCCCeEEEEeCC
Confidence 7999999975 346777777775 48999999999754
No 86
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.44 E-value=5.5e-13 Score=115.82 Aligned_cols=124 Identities=12% Similarity=0.137 Sum_probs=95.7
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 129 ~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
.+|....+.+.+.+.+.. .+.+|||+|||+|.++..++.....+|+++|+++.++ +.|++|++..++.+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~--------~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~-~~a~~~~~~~~~~~~~ 95 (219)
T 3dlc_A 25 FAPIYPIIAENIINRFGI--------TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMN-EIALKNIADANLNDRI 95 (219)
T ss_dssp TTTHHHHHHHHHHHHHCC--------CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHH-HHHHHHHHHTTCTTTE
T ss_pred hccccHHHHHHHHHhcCC--------CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHH-HHHHHHHHhccccCce
Confidence 355555566666665542 3349999999999999988876444799999999999 9999999999988789
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+++++|+.+.. ...++||+|+++..+. ..+....++.+. ++|+|||++++...
T Consensus 96 ~~~~~d~~~~~-------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 96 QIVQGDVHNIP-------IEDNYADLIVSRGSVFFWEDVATAFREIY--RILKSGGKTYIGGG 149 (219)
T ss_dssp EEEECBTTBCS-------SCTTCEEEEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEEC
T ss_pred EEEEcCHHHCC-------CCcccccEEEECchHhhccCHHHHHHHHH--HhCCCCCEEEEEec
Confidence 99999987631 2357899999986543 345667777765 48999999999753
No 87
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.44 E-value=6.9e-13 Score=131.76 Aligned_cols=106 Identities=15% Similarity=0.195 Sum_probs=83.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|..++.+++. +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++.... .+.
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl-~~~~~n~~r~g~~n-v~v~~~Da~~l~~~~------~~~ 175 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRA-KILSENIERWGVSN-AIVTNHAPAELVPHF------SGF 175 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHH-HHHHHHHHHHTCSS-EEEECCCHHHHHHHH------TTC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCc-eEEEeCCHHHhhhhc------ccc
Confidence 46889999999999999987764 346899999999999 99999999999975 999999998876433 368
Q ss_pred ccEEEECCCCCC-cc---------------H-------HHHHHHHHHcCCcCCCeEEEEEe
Q 021116 232 FDYMSVTPPYTA-VD---------------Y-------EVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 232 fDlV~~dPPy~~-~~---------------~-------~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
||+|++|||+.. +. . .++++.+ .++|+|||+++.++
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a--~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSA--IKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHH--HHTEEEEEEEEEEE
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHH--HHhcCCCcEEEEEE
Confidence 999999999743 11 0 1223322 36899999987643
No 88
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.44 E-value=2.5e-13 Score=122.62 Aligned_cols=106 Identities=13% Similarity=0.030 Sum_probs=83.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|..+..+++.+..+|++||+|+.++ +.|+++.+..+. +++++.+|+.+....+ .+++||
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~-~~a~~~~~~~~~--~~~~~~~~a~~~~~~~-----~~~~FD 130 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF-QRLRDWAPRQTH--KVIPLKGLWEDVAPTL-----PDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHH-HHHHHHGGGCSS--EEEEEESCHHHHGGGS-----CTTCEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHH-HHHHHHHhhCCC--ceEEEeehHHhhcccc-----cccCCc
Confidence 36889999999999999888777666899999999999 999999987764 4789999998765432 457899
Q ss_pred EEEECCCCCCc------cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYTAV------DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~~~------~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.|+.|+..... +.+..++.+. ++|+|||++++.+
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~--rvLkPGG~l~f~~ 170 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAF--RLLKPGGVLTYCN 170 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHH--HHEEEEEEEEECC
T ss_pred eEEEeeeecccchhhhcchhhhhhhhh--heeCCCCEEEEEe
Confidence 99999754322 2344444443 6999999998753
No 89
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.44 E-value=9.5e-13 Score=118.32 Aligned_cols=130 Identities=18% Similarity=0.092 Sum_probs=94.1
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
++..+.+.+.+++.+...... ....+.+|||+|||+|.+++.++. ....+|++||+++.++ +.|++|++.+|+.+ +
T Consensus 46 ~~~~~~~~~~~~d~l~~~~~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~-v 122 (240)
T 1xdz_A 46 TEKKEVYLKHFYDSITAAFYV-DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRI-TFLEKLSEALQLEN-T 122 (240)
T ss_dssp CSHHHHHHHTHHHHHGGGGTS-CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHTCSS-E
T ss_pred CCHHHHHHHHHHHHHhHHHhc-ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-E
Confidence 344455666666655321000 002578999999999999998775 3345899999999999 99999999999865 9
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+++++|+.++.... ...++||+|+++. ...+..+++.+. ++|+|||++++....
T Consensus 123 ~~~~~d~~~~~~~~----~~~~~fD~V~~~~---~~~~~~~l~~~~--~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 123 TFCHDRAETFGQRK----DVRESYDIVTARA---VARLSVLSELCL--PLVKKNGLFVALKAA 176 (240)
T ss_dssp EEEESCHHHHTTCT----TTTTCEEEEEEEC---CSCHHHHHHHHG--GGEEEEEEEEEEECC
T ss_pred EEEeccHHHhcccc----cccCCccEEEEec---cCCHHHHHHHHH--HhcCCCCEEEEEeCC
Confidence 99999998753100 0136899999975 245677777764 589999999987654
No 90
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.44 E-value=9.4e-13 Score=121.26 Aligned_cols=105 Identities=7% Similarity=0.016 Sum_probs=81.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC---CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG---CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G---a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.++.+|||+|||||.+++.++++. ..+|++||+++.++ +.|+++++..+...+++++++|+.++ ..+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml-~~A~~~~~~~~~~~~v~~~~~D~~~~---------~~~ 138 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMI-ERCRRHIDAYKAPTPVDVIEGDIRDI---------AIE 138 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHH-HHHHHHHHTSCCSSCEEEEESCTTTC---------CCC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHH-HHHHHHHHhhccCceEEEeecccccc---------ccc
Confidence 468899999999999999887652 23799999999999 99999999888888899999998764 136
Q ss_pred CccEEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 231 PFDYMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.||+|++.--.+.- ....+++.+. +.|+|||++++...
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~--~~LkpGG~lii~e~ 179 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIY--QGLNPGGALVLSEK 179 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred ccccceeeeeeeecCchhHhHHHHHHH--HHcCCCcEEEEEec
Confidence 79999986322111 1234555554 58999999988654
No 91
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.43 E-value=2.8e-13 Score=123.38 Aligned_cols=124 Identities=12% Similarity=0.054 Sum_probs=92.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++..| +.+|+++|+|+.++ +.|++|++.+|+.++++++.+|+.+.+.. ...|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al-~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-------~~~~ 91 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPY-QSALKNVSEHGLTSKIDVRLANGLSAFEE-------ADNI 91 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCC
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECchhhcccc-------cccc
Confidence 357899999999999999998887 56899999999999 99999999999999999999998876421 1369
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCc-cc--cCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDM-LD--TCGCLVKIKDR 288 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l-~~--~~~~~~~~~~r 288 (317)
|+|++... +...+.++++... ..|+++|++++.-...... .. ...||.+.++.
T Consensus 92 D~IviaGm-Gg~lI~~IL~~~~--~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 92 DTITICGM-GGRLIADILNNDI--DKLQHVKTLVLQPNNREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp CEEEEEEE-CHHHHHHHHHHTG--GGGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCC-chHHHHHHHHHHH--HHhCcCCEEEEECCCChHHHHHHHHHCCCEEEEEE
Confidence 99876310 1112344444432 4789999999987654321 11 14678887765
No 92
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.43 E-value=1.1e-12 Score=115.48 Aligned_cols=121 Identities=10% Similarity=0.032 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCC----c
Q 021116 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLD----V 207 (317)
Q Consensus 133 ~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~----~ 207 (317)
.....+.+.+.+.. .++.+|||+|||+|.++..+++++. .+|+++|+++.++ +.|++|++.+++.+ +
T Consensus 14 ~~~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~ 85 (217)
T 3jwh_A 14 NQQRMNGVVAALKQ-------SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSL-EIAQERLDRLRLPRNQWER 85 (217)
T ss_dssp HHHHHHHHHHHHHH-------TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHH-HHHHHHHTTCCCCHHHHTT
T ss_pred HHHHHHHHHHHHHh-------cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHH-HHHHHHHHHhcCCcccCcc
Confidence 34455566666665 3578999999999999999888753 5899999999999 99999998888764 6
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++++++|+.... ...++||+|++.-.+..- .....++.+. ++|+|||++++..+
T Consensus 86 v~~~~~d~~~~~-------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 86 LQLIQGALTYQD-------KRFHGYDAATVIEVIEHLDLSRLGAFERVLF--EFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEEECCTTSCC-------GGGCSCSEEEEESCGGGCCHHHHHHHHHHHH--TTTCCSEEEEEEEB
T ss_pred eEEEeCCccccc-------ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHH--HHcCCCEEEEEccC
Confidence 999999975321 123689999987543321 2345555554 69999998877655
No 93
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.43 E-value=5e-13 Score=127.72 Aligned_cols=104 Identities=16% Similarity=0.104 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.+++.|+.+|++||+++ ++ +.|++|++.+++.++++++++|+.++. ...++||
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l-~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD 135 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-IS-DYAVKIVKANKLDHVVTIIKGKVEEVE-------LPVEKVD 135 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTTTCC-------CSSSCEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HH-HHHHHHHHHcCCCCcEEEEECcHHHcc-------CCCCceE
Confidence 35789999999999999999998888999999995 88 999999999999888999999998751 2347899
Q ss_pred EEEECCCCC----CccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 234 YMSVTPPYT----AVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 234 lV~~dPPy~----~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|+++++.. ....+.++..+. ++|+|||+++.+
T Consensus 136 ~Iis~~~~~~l~~~~~~~~~l~~~~--r~LkpgG~li~~ 172 (349)
T 3q7e_A 136 IIISEWMGYCLFYESMLNTVLHARD--KWLAPDGLIFPD 172 (349)
T ss_dssp EEEECCCBBTBTBTCCHHHHHHHHH--HHEEEEEEEESC
T ss_pred EEEEccccccccCchhHHHHHHHHH--HhCCCCCEEccc
Confidence 999997522 134566666654 589999998743
No 94
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.43 E-value=7e-13 Score=126.35 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.+++.|+.+|+++|+++ ++ +.|++|++.+++.++++++++|+.++. ...++||
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~-~~a~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D 133 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-IL-YQAMDIIRLNKLEDTITLIKGKIEEVH-------LPVEKVD 133 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HH-HHHHHHHHHTTCTTTEEEEESCTTTSC-------CSCSCEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HH-HHHHHHHHHcCCCCcEEEEEeeHHHhc-------CCCCcEE
Confidence 46789999999999999999988877899999997 88 999999999999778999999987641 2246899
Q ss_pred EEEECC-CCCC---ccHHHHHHHHHHcCCcCCCeEEE
Q 021116 234 YMSVTP-PYTA---VDYEVLMAQISKSALVGKDSFIV 266 (317)
Q Consensus 234 lV~~dP-Py~~---~~~~~~l~~L~~~~lLkpgG~iv 266 (317)
+|++++ +|.. .....++..+. ++|+|||+++
T Consensus 134 ~Ivs~~~~~~l~~~~~~~~~l~~~~--~~LkpgG~li 168 (340)
T 2fyt_A 134 VIISEWMGYFLLFESMLDSVLYAKN--KYLAKGGSVY 168 (340)
T ss_dssp EEEECCCBTTBTTTCHHHHHHHHHH--HHEEEEEEEE
T ss_pred EEEEcCchhhccCHHHHHHHHHHHH--hhcCCCcEEE
Confidence 999997 4543 23455555554 5899999988
No 95
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.43 E-value=3.1e-13 Score=128.96 Aligned_cols=103 Identities=13% Similarity=0.067 Sum_probs=83.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.+++.|+.+|++||+++ ++ +.|++|++.+|+.++++++.+|+.++. ..++||
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~-~~a~~~~~~~~l~~~v~~~~~d~~~~~--------~~~~~D 118 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKVEEVS--------LPEQVD 118 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTTTCC--------CSSCEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HH-HHHHHHHHHcCCCCcEEEEEcchhhCC--------CCCcee
Confidence 46789999999999999999988888999999996 77 899999999999888999999987641 125799
Q ss_pred EEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 234 YMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 234 lV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|++++++... .+.+.+..+ .++|+|||+++++
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~--~~~LkpgG~li~~ 154 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHA--KKYLKPSGNMFPT 154 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHG--GGGEEEEEEEESC
T ss_pred EEEEeCchhcCChHHHHHHHHHH--HhhcCCCeEEEEe
Confidence 99999874322 233444433 3699999999855
No 96
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.43 E-value=5.5e-13 Score=116.00 Aligned_cols=116 Identities=15% Similarity=0.178 Sum_probs=82.6
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
.++...+...+...+.... ..++.+|||+|||+|.+++.++..|..+|+++|+|+.++ +.|++|+. +++
T Consensus 30 ~~~~~~~~~~l~~~~~~~~----~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~-~~a~~~~~------~~~ 98 (200)
T 1ne2_A 30 YPTDASTAAYFLIEIYNDG----NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAI-ETAKRNCG------GVN 98 (200)
T ss_dssp CCCCHHHHHHHHHHHHHHT----SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHH-HHHHHHCT------TSE
T ss_pred cCCCHHHHHHHHHHHHhcC----CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHH-HHHHHhcC------CCE
Confidence 4455556666665554221 136789999999999999998888777899999999999 99999976 378
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---HHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---YEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
++++|+.++ .++||+|++||||+... ....++.+.. .+ |.+++.++.
T Consensus 99 ~~~~d~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~--~~---g~~~~~~~~ 148 (200)
T 1ne2_A 99 FMVADVSEI----------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFE--TS---MWIYSIGNA 148 (200)
T ss_dssp EEECCGGGC----------CCCEEEEEECCCC-------CHHHHHHHHH--HE---EEEEEEEEG
T ss_pred EEECcHHHC----------CCCeeEEEECCCchhccCchhHHHHHHHHH--hc---CcEEEEEcC
Confidence 999998763 26899999999987532 2344555442 34 556665543
No 97
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.43 E-value=6.7e-13 Score=138.17 Aligned_cols=158 Identities=18% Similarity=0.129 Sum_probs=108.5
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-------------------------------
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC------------------------------- 178 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga------------------------------- 178 (317)
-|..+.++.++...... ..+..+||+|||||++.|+|+..+.
T Consensus 172 apl~e~LAa~ll~~~~~-------~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea 244 (703)
T 3v97_A 172 APIKETLAAAIVMRSGW-------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEA 244 (703)
T ss_dssp CSSCHHHHHHHHHHTTC-------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCC-------CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHH
Confidence 46778888887766543 3578999999999999999876431
Q ss_pred ------------CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc--
Q 021116 179 ------------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-- 244 (317)
Q Consensus 179 ------------~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-- 244 (317)
.+|+|+|+|+.++ +.|++|++.+|+.+.+++.++|+.++.. +...+.||+|++||||+..
T Consensus 245 ~~~~~~~~~~~~~~i~G~Did~~av-~~A~~N~~~agv~~~i~~~~~D~~~~~~-----~~~~~~~d~Iv~NPPYG~Rlg 318 (703)
T 3v97_A 245 QTRARKGLAEYSSHFYGSDSDARVI-QRARTNARLAGIGELITFEVKDVAQLTN-----PLPKGPYGTVLSNPPYGERLD 318 (703)
T ss_dssp HHHHHHHHHHCCCCEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEECCGGGCCC-----SCTTCCCCEEEECCCCCC---
T ss_pred HHHhhhccccCCccEEEEECCHHHH-HHHHHHHHHcCCCCceEEEECChhhCcc-----ccccCCCCEEEeCCCcccccc
Confidence 3699999999999 9999999999998889999999987421 1112379999999999753
Q ss_pred ---cHHHHHHHHHH-cCCcCCCeEEEEEeCCCCCccccCCCeEEEEEee--cCceEEEEEeech
Q 021116 245 ---DYEVLMAQISK-SALVGKDSFIVVEYPLRTDMLDTCGCLVKIKDRR--FGRTHLAIYGPDW 302 (317)
Q Consensus 245 ---~~~~~l~~L~~-~~lLkpgG~ivv~~~~~~~l~~~~~~~~~~~~r~--yG~~~l~~~~p~~ 302 (317)
...++...+.+ .+.+.+||.+++-++.. .+.. .-++...+.++ -|..+..+|....
T Consensus 319 ~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~~-~l~~-~~glk~~k~~~l~nG~l~~~~~~y~~ 380 (703)
T 3v97_A 319 SEPALIALHSLLGRIMKNQFGGWNLSLFSASP-DLLS-CLQLRADKQYKAKNGPLDCVQKNYHV 380 (703)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTCEEEEEESCH-HHHH-TTCCCEEEEEEEEETTEEEEEEEEEC
T ss_pred chhHHHHHHHHHHHHHHhhCCCCeEEEEeCCH-HHHH-HhCCCcccceeeecCCEEEEEEEEEe
Confidence 22333333321 12356899999887643 3322 23344333322 4666777765443
No 98
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.43 E-value=8.4e-13 Score=120.59 Aligned_cols=106 Identities=18% Similarity=0.125 Sum_probs=84.9
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+.+|||+|||+|..++.++.. +..+|++||+++.++ +.|++|++.+|+.+ ++++++|+.++... +...++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~l~~-v~~~~~d~~~~~~~----~~~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKV-AFVERAIEVLGLKG-ARALWGRAEVLARE----AGHREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHTCSS-EEEEECCHHHHTTS----TTTTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhCCCc-eEEEECcHHHhhcc----cccCCCce
Confidence 5789999999999999987764 456899999999999 99999999999976 99999999876421 00136899
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|+++- ...+..+++.+. ++|+|||++++....
T Consensus 154 ~I~s~a---~~~~~~ll~~~~--~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 154 RAVARA---VAPLCVLSELLL--PFLEVGGAAVAMKGP 186 (249)
T ss_dssp EEEEES---SCCHHHHHHHHG--GGEEEEEEEEEEECS
T ss_pred EEEECC---cCCHHHHHHHHH--HHcCCCeEEEEEeCC
Confidence 999973 335666777664 689999999886653
No 99
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.43 E-value=5.1e-13 Score=114.41 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=82.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.++.++ +|+++|+|+.++ +. .++++++++|+.+.+ ..++||+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~-~~----------~~~~~~~~~d~~~~~--------~~~~fD~ 81 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRAL-ES----------HRGGNLVRADLLCSI--------NQESVDV 81 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHH-HT----------CSSSCEEECSTTTTB--------CGGGCSE
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHH-hc----------ccCCeEEECChhhhc--------ccCCCCE
Confidence 56799999999999999988887 899999999998 65 245789999987642 2368999
Q ss_pred EEECCCCCCc----------cHHHHHHHHHHcCCcCCCeEEEEEeCCCCCccc-----cCCCeEEE--EEeecCceEEEE
Q 021116 235 MSVTPPYTAV----------DYEVLMAQISKSALVGKDSFIVVEYPLRTDMLD-----TCGCLVKI--KDRRFGRTHLAI 297 (317)
Q Consensus 235 V~~dPPy~~~----------~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~-----~~~~~~~~--~~r~yG~~~l~~ 297 (317)
|++||||... .....++.+.. .+ |||++++.........+ ...+|... .++.+|..++..
T Consensus 82 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~ 158 (170)
T 3q87_B 82 VVFNPPYVPDTDDPIIGGGYLGREVIDRFVD--AV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYI 158 (170)
T ss_dssp EEECCCCBTTCCCTTTBCCGGGCHHHHHHHH--HC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEE
T ss_pred EEECCCCccCCccccccCCcchHHHHHHHHh--hC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEE
Confidence 9999999731 12334444432 34 99999987754333211 12456543 344566555544
Q ss_pred E
Q 021116 298 Y 298 (317)
Q Consensus 298 ~ 298 (317)
+
T Consensus 159 ~ 159 (170)
T 3q87_B 159 I 159 (170)
T ss_dssp E
T ss_pred E
Confidence 4
No 100
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.42 E-value=9.8e-13 Score=124.54 Aligned_cols=114 Identities=16% Similarity=0.107 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH
Q 021116 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV 215 (317)
Q Consensus 136 v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~ 215 (317)
..+++...+.. .++.+|||+|||+|.+++.+++.|+.+|+++|++ .++ +.|++|++.+++.++++++++|+
T Consensus 26 y~~ai~~~~~~-------~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~-~~a~~~~~~~~~~~~i~~~~~d~ 96 (328)
T 1g6q_1 26 YRNAIIQNKDL-------FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SII-EMAKELVELNGFSDKITLLRGKL 96 (328)
T ss_dssp HHHHHHHHHHH-------HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THH-HHHHHHHHHTTCTTTEEEEESCT
T ss_pred HHHHHHhhHhh-------cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHH-HHHHHHHHHcCCCCCEEEEECch
Confidence 44555544443 3578999999999999999998888899999999 588 99999999999988899999998
Q ss_pred HHHHHHHhhhcCCCCCccEEEECCCCCC----ccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 216 ETFLERAEQFVGKDGPFDYMSVTPPYTA----VDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 216 ~~~l~~~~~~~~~~~~fDlV~~dPPy~~----~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
.++. ...++||+|+++++... ...+.++..+. ++|+|||+++.
T Consensus 97 ~~~~-------~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~--~~LkpgG~li~ 143 (328)
T 1g6q_1 97 EDVH-------LPFPKVDIIISEWMGYFLLYESMMDTVLYARD--HYLVEGGLIFP 143 (328)
T ss_dssp TTSC-------CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHH--HHEEEEEEEES
T ss_pred hhcc-------CCCCcccEEEEeCchhhcccHHHHHHHHHHHH--hhcCCCeEEEE
Confidence 7642 12368999999987322 23455555554 48999999973
No 101
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.42 E-value=1.3e-12 Score=115.91 Aligned_cols=108 Identities=9% Similarity=0.086 Sum_probs=84.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+.+|||+|||+|.+++.++... ..+|++||+++.++ +.|++|++.+++. +++++++|+.++...+ ..++||
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l-~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~-----~~~~~d 110 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVI-VTAVQKVKDSEAQ-NVKLLNIDADTLTDVF-----EPGEVK 110 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHSCCS-SEEEECCCGGGHHHHC-----CTTSCC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHH-HHHHHHHHHcCCC-CEEEEeCCHHHHHhhc-----CcCCcC
Confidence 46799999999999999887753 45899999999999 9999999999885 4999999998753322 246799
Q ss_pred EEEECCC--CCCc-------cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 234 YMSVTPP--YTAV-------DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 234 lV~~dPP--y~~~-------~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
.|+++.| +... .+...++.+. ++|+|||++++.+..
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~--~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYE--EVMGKGGSIHFKTDN 155 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHH--HHHTTSCEEEEEESC
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHH--HHcCCCCEEEEEeCC
Confidence 9988633 3321 1356666665 489999999998854
No 102
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.42 E-value=2.2e-12 Score=119.46 Aligned_cols=104 Identities=14% Similarity=0.102 Sum_probs=86.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++.. | .+|+++|+++.++ +.|++++...|+.++++++.+|+.++ +++|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~f 138 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQY-AHDKAMFDEVDSPRRKEVRIQGWEEF----------DEPV 138 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHH-HHHHHHHHHSCCSSCEEEEECCGGGC----------CCCC
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECCHHHc----------CCCc
Confidence 36789999999999999998887 7 5799999999999 99999999999987899999999765 3789
Q ss_pred cEEEECCCCCC----------ccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 233 DYMSVTPPYTA----------VDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~----------~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+|++...+.. ..+...++.+. ++|+|||++++....
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFY--NLTPDDGRMLLHTIT 185 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHH--HSSCTTCEEEEEEEE
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHH--HhcCCCcEEEEEEEe
Confidence 99998654321 23456677665 599999999987653
No 103
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=5.6e-12 Score=108.25 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=83.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..|. +|+++|+++.++ +.+++|++..++.+ ++++.+|+.+.. . .++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~~~-~~~~~~d~~~~~-------~-~~~~D 99 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSI-ANVERIKSIENLDN-LHTRVVDLNNLT-------F-DRQYD 99 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHTCTT-EEEEECCGGGCC-------C-CCCEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHHHHhCCCCC-cEEEEcchhhCC-------C-CCCce
Confidence 3577999999999999999888865 799999999999 99999999888754 999999987642 1 47899
Q ss_pred EEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|++...+... .....++.+. ++|+|||++++..
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~--~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQ--RCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHH--HTEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHH--HhcCCCeEEEEEE
Confidence 99998765422 4566676665 4899999977653
No 104
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.42 E-value=2.3e-12 Score=116.78 Aligned_cols=107 Identities=12% Similarity=0.080 Sum_probs=87.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..+++....+|+++|+++.++ +.++++++..++.++++++.+|+.+. +..+++||
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~fD 131 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQV-NQANARATAAGLANRVTFSYADAMDL-------PFEDASFD 131 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTTSC-------CSCTTCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEECccccC-------CCCCCCcc
Confidence 36789999999999999988775345899999999999 99999999999888899999998753 22347899
Q ss_pred EEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++...+. ..+....++.+. ++|+|||++++...
T Consensus 132 ~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 132 AVWALESLHHMPDRGRALREMA--RVLRPGGTVAIADF 167 (273)
T ss_dssp EEEEESCTTTSSCHHHHHHHHH--TTEEEEEEEEEEEE
T ss_pred EEEEechhhhCCCHHHHHHHHH--HHcCCCeEEEEEEe
Confidence 999866543 345677777765 69999999988753
No 105
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.41 E-value=1.9e-12 Score=118.62 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=84.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.++..|. +|+++|+++.++ +.+++|++.+++ +++++.+|+.+.. ..++||+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~--------~~~~fD~ 187 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSI-AFLNETKEKENL--NISTALYDINAAN--------IQENYDF 187 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCGGGCC--------CCSCEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHHHHHcCC--ceEEEEecccccc--------ccCCccE
Confidence 578999999999999999988876 799999999999 999999999987 5899999987642 1478999
Q ss_pred EEECCCCCC---ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYTA---VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~~---~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+++.++.. ......++.+. ++|+|||++++.+.
T Consensus 188 i~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 188 IVSTVVFMFLNRERVPSIIKNMK--EHTNVGGYNLIVAA 224 (286)
T ss_dssp EEECSSGGGSCGGGHHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred EEEccchhhCCHHHHHHHHHHHH--HhcCCCcEEEEEEe
Confidence 999887643 23456666665 48999999776554
No 106
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.41 E-value=2.5e-12 Score=115.34 Aligned_cols=110 Identities=11% Similarity=0.024 Sum_probs=87.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhh--------
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQ-------- 224 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G--a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~-------- 224 (317)
++.+|||+|||+|..++.+++.. ..+|+++|+++.++ +.|++|++.+|+.++++++.+|+.+.+.....
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWT-NVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 47899999999999999887763 45899999999999 99999999999887899999999886653310
Q ss_pred hcCC-C-CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 225 FVGK-D-GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 225 ~~~~-~-~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.... . ++||+|++|.. ...+...++.+. ++|+|||++++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~--~~~~~~~l~~~~--~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD--KENYPNYYPLIL--KLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSC--GGGHHHHHHHHH--HHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCC--HHHHHHHHHHHH--HHcCCCeEEEEEc
Confidence 0001 1 67999999953 345667777665 4899999999975
No 107
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.40 E-value=3.2e-13 Score=134.84 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.++..|+.+|+++|+++ ++ +.|++|++.+|+.++++++.+|+.++. ..++||
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l-~~A~~~~~~~gl~~~v~~~~~d~~~~~--------~~~~fD 226 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKVEEVS--------LPEQVD 226 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HH-HHHHHHHHHTTCTTTEEEEESCTTTCC--------CSSCEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HH-HHHHHHHHHcCCCCcEEEEECchhhCc--------cCCCeE
Confidence 35789999999999999998888877999999999 88 999999999999888999999987641 125799
Q ss_pred EEEECCCCCCccHHHHHHHHH-HcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYTAVDYEVLMAQIS-KSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~-~~~lLkpgG~ivv~~ 269 (317)
+|+++++......+..++.+. ..++|+|||+++++.
T Consensus 227 ~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 227 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999998832111133333332 247999999998644
No 108
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.40 E-value=1.7e-12 Score=114.15 Aligned_cols=125 Identities=13% Similarity=0.102 Sum_probs=91.1
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCC--
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLD-- 206 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~-- 206 (317)
.+......+.+.+.+.. .++.+|||+|||+|.++..++..+. .+|+++|+++.++ +.+++|+..+++.+
T Consensus 11 ~~~~~~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~ 82 (219)
T 3jwg_A 11 LNLNQQRLGTVVAVLKS-------VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVL-ERAKDRLKIDRLPEMQ 82 (219)
T ss_dssp -CHHHHHHHHHHHHHHH-------TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHH-HHHHHHHTGGGSCHHH
T ss_pred CcchHHHHHHHHHHHhh-------cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHHHhhcccccc
Confidence 34445555566666654 3578999999999999998887764 5899999999999 99999998887754
Q ss_pred --ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---HHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 207 --VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---YEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 207 --~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+++++++|+.... ...++||+|++.-....-. ....++.+. ++|+|||++++..+.
T Consensus 83 ~~~v~~~~~d~~~~~-------~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 83 RKRISLFQSSLVYRD-------KRFSGYDAATVIEVIEHLDENRLQAFEKVLF--EFTRPQTVIVSTPNK 143 (219)
T ss_dssp HTTEEEEECCSSSCC-------GGGTTCSEEEEESCGGGCCHHHHHHHHHHHH--TTTCCSEEEEEEEBG
T ss_pred CcceEEEeCcccccc-------cccCCCCEEEEHHHHHhCCHHHHHHHHHHHH--HhhCCCEEEEEccch
Confidence 6999999984321 1236899999865432222 235555554 699999977766543
No 109
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.40 E-value=3.8e-12 Score=119.94 Aligned_cols=102 Identities=19% Similarity=0.103 Sum_probs=83.1
Q ss_pred CCCCeEEEECCCcchHH-HHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVG-IEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~-Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.++ +.+++....+|++||+|++++ +.|++|++..|+ ++++++++|+.++. +.+|
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l-~~Ar~~~~~~gl-~~v~~v~gDa~~l~---------d~~F 189 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIA-ELSRKVIEGLGV-DGVNVITGDETVID---------GLEF 189 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHH-HHHHHHHHHHTC-CSEEEEESCGGGGG---------GCCC
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHH-HHHHHHHHhcCC-CCeEEEECchhhCC---------CCCc
Confidence 47899999999999776 444443334799999999999 999999999999 78999999998752 3789
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|+++- ...+..+.++.+. +.|+|||++++...
T Consensus 190 DvV~~~a--~~~d~~~~l~el~--r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAA--LAEPKRRVFRNIH--RYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECT--TCSCHHHHHHHHH--HHCCTTCEEEEEEC
T ss_pred CEEEECC--CccCHHHHHHHHH--HHcCCCcEEEEEcC
Confidence 9999974 2346777888776 48999999998764
No 110
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.40 E-value=3.8e-13 Score=124.01 Aligned_cols=84 Identities=18% Similarity=0.117 Sum_probs=70.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCH-------HHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDP-------WVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~-------~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~ 227 (317)
++.+|||+|||+|.+++.+++.|+ +|+++|+|+ .++ +.|++|++.+++.++++++++|+.+++..+..
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l-~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~--- 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGI-RRALLNPETQDTAARINLHFGNAAEQMPALVK--- 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHH-HHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH---
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHH-HHHHhHHHhhCCccCeEEEECCHHHHHHhhhc---
Confidence 468999999999999999988875 699999999 999 99999999998877799999999988754420
Q ss_pred CCCCccEEEECCCCCC
Q 021116 228 KDGPFDYMSVTPPYTA 243 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~ 243 (317)
...+||+|++||||..
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 0157999999999864
No 111
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.40 E-value=9.7e-13 Score=124.12 Aligned_cols=106 Identities=13% Similarity=0.037 Sum_probs=82.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|..++.++.. +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++.. . .+.
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l-~~a~~~~~~~g~~~-v~~~~~D~~~~~~-~------~~~ 187 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRL-RETRLNLSRLGVLN-VILFHSSSLHIGE-L------NVE 187 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHHTCCS-EEEESSCGGGGGG-G------CCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHH-HHHHHHHHHhCCCe-EEEEECChhhccc-c------ccc
Confidence 46789999999999999988764 335899999999999 99999999999864 9999999887532 1 367
Q ss_pred ccEEEECCCCCC-cc----------------------HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 232 FDYMSVTPPYTA-VD----------------------YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 232 fDlV~~dPPy~~-~~----------------------~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
||+|++|||+.. +. ...+++.+ .++|+|||++++.+-
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~--~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKG--LEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHH--HHHEEEEEEEEEEES
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHH--HHhCCCCCEEEEEeC
Confidence 999999999742 10 02333333 358999999988644
No 112
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.40 E-value=5.2e-12 Score=110.62 Aligned_cols=133 Identities=8% Similarity=0.016 Sum_probs=98.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G--a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|.++..++..+ ..+|+++|+++.++ +.++++++.+++. +++++.+|+.++. ..+++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~-~~~~~~~d~~~~~-------~~~~~ 106 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMV-NYAWEKVNKLGLK-NVEVLKSEENKIP-------LPDNT 106 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHH-HHHHHHHHHHTCT-TEEEEECBTTBCS-------SCSSC
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHHHHcCCC-cEEEEecccccCC-------CCCCC
Confidence 357899999999999999888765 34899999999999 9999999999886 5999999987642 23578
Q ss_pred ccEEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC---------------ccc--cCCCeEEEEEeecCce
Q 021116 232 FDYMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPLRTD---------------MLD--TCGCLVKIKDRRFGRT 293 (317)
Q Consensus 232 fDlV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~---------------l~~--~~~~~~~~~~r~yG~~ 293 (317)
||+|+++..+. ..+....++.+. ++|+|||++++....... +.. ...||.+++...++..
T Consensus 107 fD~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 184 (219)
T 3dh0_A 107 VDFIFMAFTFHELSEPLKFLEELK--RVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKY 184 (219)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHH--HHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTT
T ss_pred eeEEEeehhhhhcCCHHHHHHHHH--HHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCc
Confidence 99999875532 235566777665 489999999987532211 000 1367888777666654
Q ss_pred EEEE
Q 021116 294 HLAI 297 (317)
Q Consensus 294 ~l~~ 297 (317)
...+
T Consensus 185 ~~~~ 188 (219)
T 3dh0_A 185 CFGV 188 (219)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4333
No 113
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.40 E-value=5.9e-13 Score=122.21 Aligned_cols=124 Identities=8% Similarity=0.009 Sum_probs=90.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++..| +.+|+++|+|+.++ +.|++|++.+|+.++++++.+|+.+.+.. ..+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-------~~~~ 91 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPF-QSAQKQVRSSGLTEQIDVRKGNGLAVIEK-------KDAI 91 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCC
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEecchhhccCc-------cccc
Confidence 357899999999999999998887 45899999999999 99999999999998999999998875421 1359
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCc-cc--cCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDM-LD--TCGCLVKIKDR 288 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l-~~--~~~~~~~~~~r 288 (317)
|+|++.-. +...+.++++.. ...|++++++++.-...... .. ...||.+.++.
T Consensus 92 D~Iviagm-Gg~lI~~IL~~~--~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 92 DTIVIAGM-GGTLIRTILEEG--AAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp CEEEEEEE-CHHHHHHHHHHT--GGGGTTCCEEEEEESSCHHHHHHHHHHHTEEEEEEE
T ss_pred cEEEEeCC-chHHHHHHHHHH--HHHhCCCCEEEEEcCCChHHHHHHHHHCCCEEEEEE
Confidence 99886310 111234444443 35789999999987644321 11 13567776554
No 114
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.40 E-value=1.3e-12 Score=114.19 Aligned_cols=113 Identities=14% Similarity=0.040 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEec
Q 021116 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (317)
Q Consensus 135 ~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD 214 (317)
.+...+...+.. .++.+|||+|||+|.+++.++..+ .+|+++|+++.++ +.|++|++.+++. +++++.+|
T Consensus 64 ~~~~~~~~~l~~-------~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~-~~a~~~~~~~~~~-~v~~~~~d 133 (210)
T 3lbf_A 64 YMVARMTELLEL-------TPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQ-WQARRRLKNLDLH-NVSTRHGD 133 (210)
T ss_dssp HHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEESC
T ss_pred HHHHHHHHhcCC-------CCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHH-HHHHHHHHHcCCC-ceEEEECC
Confidence 344455555543 468899999999999999888875 5899999999999 9999999999986 59999999
Q ss_pred HHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 215 VETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+.+... ..++||+|+++.....-. + .+. +.|+|||++++..+.
T Consensus 134 ~~~~~~-------~~~~~D~i~~~~~~~~~~-~----~~~--~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQ-------ARAPFDAIIVTAAPPEIP-T----ALM--TQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCG-------GGCCEEEEEESSBCSSCC-T----HHH--HTEEEEEEEEEEECS
T ss_pred cccCCc-------cCCCccEEEEccchhhhh-H----HHH--HhcccCcEEEEEEcC
Confidence 877432 136899999986543211 1 222 379999999999886
No 115
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.39 E-value=2.8e-12 Score=112.56 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=82.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
.+.+|||+|||+|.++..++..+. +|+++|+++.++ +.|++|++.++ .+++++++|+.+.. ...++||+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~--~~~~~~~~d~~~~~-------~~~~~~D~ 106 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMI-RKAREYAKSRE--SNVEFIVGDARKLS-------FEDKTFDY 106 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCCEEEECCTTSCC-------SCTTCEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHhcC--CCceEEECchhcCC-------CCCCcEEE
Confidence 478999999999999998888876 899999999999 99999998877 45899999987631 12468999
Q ss_pred EEECCC--CCC-ccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 235 MSVTPP--YTA-VDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 235 V~~dPP--y~~-~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+++++ +.. .+....++.+. ++|+|||++++....
T Consensus 107 v~~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 107 VIFIDSIVHFEPLELNQVFKEVR--RVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHH--HHEEEEEEEEEEEEC
T ss_pred EEEcCchHhCCHHHHHHHHHHHH--HHcCCCcEEEEEecC
Confidence 999988 432 13345555554 589999999887653
No 116
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.39 E-value=2.7e-12 Score=125.86 Aligned_cols=132 Identities=17% Similarity=0.091 Sum_probs=91.0
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh--CCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT--GFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~--gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
+.+|||+|||+|..++.++..+ .+|++||+|+.++ +.|++|++.+ |+ ++++++++|+.+++.... ..+||
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l-~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~fD 165 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETA-VAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHPD 165 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHH-HHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCCS
T ss_pred CCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHH-HHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCce
Confidence 7899999999999999776665 5899999999999 9999999998 88 679999999998765421 25799
Q ss_pred EEEECCCCCCc-------------cHHHHHHHHHHcCCcCCCeEEEEEeCCCCCcc----ccCCCeEEEEEeecCce-EE
Q 021116 234 YMSVTPPYTAV-------------DYEVLMAQISKSALVGKDSFIVVEYPLRTDML----DTCGCLVKIKDRRFGRT-HL 295 (317)
Q Consensus 234 lV~~dPPy~~~-------------~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~----~~~~~~~~~~~r~yG~~-~l 295 (317)
+|++||||... ....+.+.+ +.....+++-++..-++. ......++.-----|+. ++
T Consensus 166 vV~lDPPrr~~~~grv~~led~~P~l~~~~~~l-----~~~~~~~~vK~sP~ld~~~~~~~l~~~~ev~~vSv~ge~kE~ 240 (410)
T 3ll7_A 166 YIYVDPARRSGADKRVYAIADCEPDLIPLATEL-----LPFCSSILAKLSPMIDLWDTLQSLLHVQELHVVAAHGEVKEL 240 (410)
T ss_dssp EEEECCEEC-----CCCCGGGEESCHHHHHHHH-----GGGSSEEEEEECTTSCHHHHHHHCSSEEEEEEEEETTEEEEE
T ss_pred EEEECCCCcCCCCceEEehhhcCCCHHHHHHHH-----HhhCCcEEEEcCCCCChHHHHhhCCCCcEEEEEEeCCeEEEE
Confidence 99999998652 123333333 233455666776655554 22333333322333543 55
Q ss_pred EEEee
Q 021116 296 AIYGP 300 (317)
Q Consensus 296 ~~~~p 300 (317)
.+|..
T Consensus 241 ~l~~~ 245 (410)
T 3ll7_A 241 LVRMS 245 (410)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 55543
No 117
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.38 E-value=1.1e-12 Score=117.29 Aligned_cols=104 Identities=14% Similarity=0.071 Sum_probs=79.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..+..+|+++|+++.++ +.|++|++..+ .+++++++|+.+.... ..+++||+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~--~~v~~~~~d~~~~~~~-----~~~~~fD~ 131 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVF-QRLRDWAPRQT--HKVIPLKGLWEDVAPT-----LPDGHFDG 131 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHH-HHHHHHGGGCS--SEEEEEESCHHHHGGG-----SCTTCEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHH-HHHHHHHHhcC--CCeEEEecCHHHhhcc-----cCCCceEE
Confidence 5789999999999999988776666899999999999 99999988776 4599999999876322 23578999
Q ss_pred EEECCCCCC--c-----cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 235 MSVTPPYTA--V-----DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 235 V~~dPPy~~--~-----~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|++|. |.. . ..+..++.+. ++|+|||++++..
T Consensus 132 V~~d~-~~~~~~~~~~~~~~~~l~~~~--r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDT-YPLSEETWHTHQFNFIKNHAF--RLLKPGGVLTYCN 170 (236)
T ss_dssp EEECC-CCCBGGGTTTHHHHHHHHTHH--HHEEEEEEEEECC
T ss_pred EEECC-cccchhhhhhhhHHHHHHHHH--HhcCCCeEEEEEe
Confidence 99952 221 1 1223455444 5899999998653
No 118
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.38 E-value=1.6e-12 Score=121.25 Aligned_cols=106 Identities=14% Similarity=-0.016 Sum_probs=86.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++.+ |+ +|+++|+++.++ +.|++|++.+|+.++++++.+|+.+. +..+++|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~-------~~~~~~f 186 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQA-DFGNRRARELRIDDHVRSRVCNMLDT-------PFDKGAV 186 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEECCTTSC-------CCCTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHHHHcCCCCceEEEECChhcC-------CCCCCCE
Confidence 45789999999999999988877 64 799999999999 99999999999987899999998753 1235789
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|++.-.+...+....++.+. ++|+|||++++...
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHS--RFLKVGGRYVTITG 222 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred eEEEECCchhhCCHHHHHHHHH--HHcCCCcEEEEEEc
Confidence 9999865433334667777765 48999999987763
No 119
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.38 E-value=1.9e-12 Score=129.32 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=82.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|..++.++.. +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++.... .+.|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l-~~~~~n~~r~g~~n-v~~~~~D~~~~~~~~------~~~f 188 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRV-KVLHANISRCGISN-VALTHFDGRVFGAAV------PEMF 188 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHH-HHHHHHHHHHTCCS-EEEECCCSTTHHHHS------TTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCc-EEEEeCCHHHhhhhc------cccC
Confidence 6889999999999999987764 235899999999999 99999999999864 999999998764322 3689
Q ss_pred cEEEECCCCCC-cc----------------------HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTA-VD----------------------YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~-~~----------------------~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|.|++||||.. +. ..++++.+ .++|+|||+++.++-
T Consensus 189 D~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a--~~~LkpGG~LvysTc 247 (479)
T 2frx_A 189 DAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSA--FHALRPGGTLVYSTC 247 (479)
T ss_dssp EEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHH--HHHEEEEEEEEEEES
T ss_pred CEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHH--HHhcCCCCEEEEecc
Confidence 99999999852 11 01223322 358999999987643
No 120
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.38 E-value=3.6e-12 Score=116.76 Aligned_cols=106 Identities=14% Similarity=0.212 Sum_probs=86.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..|. +|+++|+++.++ +.|+++++..|+.++++++++|+.+.... .+++||+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~fD~ 139 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMI-DRAKQAAEAKGVSDNMQFIHCAAQDVASH------LETPVDL 139 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHC-CCGGGEEEEESCGGGTGGG------CSSCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCCcceEEEEcCHHHhhhh------cCCCceE
Confidence 467999999999999999888865 799999999999 99999999999877799999999875321 2578999
Q ss_pred EEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|++.-.+. ..+....++.+. ++|+|||++++...
T Consensus 140 v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 140 ILFHAVLEWVADPRSVLQTLW--SVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEESCGGGCSCHHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred EEECchhhcccCHHHHHHHHH--HHcCCCeEEEEEEe
Confidence 99975542 335667777775 58999999998764
No 121
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.37 E-value=1.8e-12 Score=115.64 Aligned_cols=105 Identities=13% Similarity=0.031 Sum_probs=84.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.+++. ..+|+++|+++.++ +.|++|++.+++.++++++.+|+.+.. .....||
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~~D 160 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFY-KTAQKNLKKFNLGKNVKFFNVDFKDAE-------VPEGIFH 160 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHH-HHHHHHHHHTTCCTTEEEECSCTTTSC-------CCTTCBS
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHH-HHHHHHHHHcCCCCcEEEEEcChhhcc-------cCCCccc
Confidence 36789999999999999998887 56899999999999 999999999998677999999987642 0235799
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+|++|+|.. ...++.+. ++|+|||++++..+...
T Consensus 161 ~v~~~~~~~----~~~l~~~~--~~L~~gG~l~~~~~~~~ 194 (248)
T 2yvl_A 161 AAFVDVREP----WHYLEKVH--KSLMEGAPVGFLLPTAN 194 (248)
T ss_dssp EEEECSSCG----GGGHHHHH--HHBCTTCEEEEEESSHH
T ss_pred EEEECCcCH----HHHHHHHH--HHcCCCCEEEEEeCCHH
Confidence 999998732 23444443 37999999999988543
No 122
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.36 E-value=2.3e-12 Score=124.37 Aligned_cols=114 Identities=16% Similarity=0.097 Sum_probs=85.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhC---CCC----ceEEEEecHHHHHHHHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG---FLD----VSSIHTVRVETFLERAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~g---l~~----~v~ii~gD~~~~l~~~~~~~~ 227 (317)
.+++|||+|||+|.++.++++.+..+|++||+|+.++ +.|++|+...+ +++ +++++.+|+.+++....+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vi-e~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~--- 263 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK--- 263 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH---
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc---
Confidence 5789999999999999999988878999999999999 99999976432 332 699999999999875310
Q ss_pred CCCCccEEEECCCC---CCc----cHHHHHHHHH--HcCCcCCCeEEEEEeCCC
Q 021116 228 KDGPFDYMSVTPPY---TAV----DYEVLMAQIS--KSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 228 ~~~~fDlV~~dPPy---~~~----~~~~~l~~L~--~~~lLkpgG~ivv~~~~~ 272 (317)
..++||+||+|||. ... ...+.++.+. ..++|+|||++++.....
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 13689999999964 211 1123333331 135899999999887654
No 123
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.36 E-value=9.4e-12 Score=118.83 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=84.6
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHh--CC-CCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~--gl-~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
...+|||+|||+|.+++++++. +..+|++||+|+.++ +.|++|+..+ ++ .++++++.+|+.+++... ..+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l-~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~~~ 193 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVV-DVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----AEG 193 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----CTT
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----cCC
Confidence 4689999999999999998876 356899999999999 9999998763 44 357999999999876432 136
Q ss_pred CccEEEECCCCCCc--c---HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 231 PFDYMSVTPPYTAV--D---YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~--~---~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+||+|++|++.... . ..+.++.+. ++|+|||++++...
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~--~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVA--RALRPGGVVCTQAE 236 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHH--HHEEEEEEEEEECC
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHH--HhcCCCcEEEEecC
Confidence 89999999863221 1 356666665 48999999999743
No 124
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.36 E-value=1.8e-12 Score=114.86 Aligned_cols=125 Identities=13% Similarity=0.065 Sum_probs=87.4
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCc
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~ 207 (317)
+|+...+...+++.+.... ..++.+|||+|||+|.+++.+++. | ..+|+++|+++.++ +.+++|++.+ ++
T Consensus 52 ~p~~~~~~~~i~~~l~~~~----~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~~~~~~~~~---~~ 123 (227)
T 1g8a_A 52 NPNRSKLGAAIMNGLKNFP----IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVL-RELVPIVEER---RN 123 (227)
T ss_dssp CTTTCHHHHHHHTTCCCCC----CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHSSC---TT
T ss_pred CCCchhHHHHHHhhHHhcC----CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHH-HHHHHHHhcc---CC
Confidence 5555555555544443210 135789999999999999988865 4 35899999999998 9999998765 45
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++++++|+.+.... ....++||+|++|+|.. ......+..+. ++|+|||++++..
T Consensus 124 v~~~~~d~~~~~~~----~~~~~~~D~v~~~~~~~-~~~~~~l~~~~--~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 124 IVPILGDATKPEEY----RALVPKVDVIFEDVAQP-TQAKILIDNAE--VYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCTTCGGGG----TTTCCCEEEEEECCCST-THHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred CEEEEccCCCcchh----hcccCCceEEEECCCCH-hHHHHHHHHHH--HhcCCCCEEEEEE
Confidence 99999998763210 01135799999998732 22223355554 4899999998874
No 125
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.35 E-value=7.9e-12 Score=123.41 Aligned_cols=120 Identities=13% Similarity=0.063 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHH-------HHhHHHhCCC
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVL-------IPNLEWTGFL 205 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~a-------r~N~~~~gl~ 205 (317)
..+...+++.+.. .++.+|||+|||+|.+++.++.. |+.+|++||+++.++ +.| ++|++.+|+.
T Consensus 228 p~~v~~ml~~l~l-------~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l-~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 228 PNFLSDVYQQCQL-------KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDAS-DLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHH-HHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHhcCC-------CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHhHHHHHHHHHHcCCC
Confidence 4445555555533 46789999999999999988874 667899999999998 999 9999999953
Q ss_pred -CceEEEEecHH-H-H-HHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 206 -DVSSIHTVRVE-T-F-LERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 206 -~~v~ii~gD~~-~-~-l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++++++++|.. . + +... ..+||+|+++...........+..+. +.|+|||++++..
T Consensus 300 ~~nV~~i~gD~~~~~~~~~~~------~~~FDvIvvn~~l~~~d~~~~L~el~--r~LKpGG~lVi~d 359 (433)
T 1u2z_A 300 LNNVEFSLKKSFVDNNRVAEL------IPQCDVILVNNFLFDEDLNKKVEKIL--QTAKVGCKIISLK 359 (433)
T ss_dssp CCCEEEEESSCSTTCHHHHHH------GGGCSEEEECCTTCCHHHHHHHHHHH--TTCCTTCEEEESS
T ss_pred CCceEEEEcCccccccccccc------cCCCCEEEEeCccccccHHHHHHHHH--HhCCCCeEEEEee
Confidence 56999987543 2 1 1111 25799999975432234555555554 6899999999874
No 126
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.35 E-value=5.6e-12 Score=113.79 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=83.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++.++. +|+++|+++.++ +.|+++++..++. +++++.+|+.++ +..+++||
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~~~~~~-~v~~~~~d~~~l-------~~~~~~fD 105 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDIL-KVARAFIEGNGHQ-QVEYVQGDAEQM-------PFTDERFH 105 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEECCC-CC-------CSCTTCEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHH-HHHHHHHHhcCCC-ceEEEEecHHhC-------CCCCCCEE
Confidence 3678999999999999998888775 899999999999 9999999988875 599999998763 22357899
Q ss_pred EEEECCCC-CCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPY-TAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy-~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|++.-.. +..+....+..+. ++|+|||++++..
T Consensus 106 ~V~~~~~l~~~~d~~~~l~~~~--r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 106 IVTCRIAAHHFPNPASFVSEAY--RVLKKGGQLLLVD 140 (260)
T ss_dssp EEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred EEEEhhhhHhcCCHHHHHHHHH--HHcCCCCEEEEEE
Confidence 99987432 2345667777765 4899999999863
No 127
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.35 E-value=1.6e-12 Score=123.60 Aligned_cols=103 Identities=13% Similarity=0.071 Sum_probs=80.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGC------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGK 228 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga------~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~ 228 (317)
.+.+|||+|||||.+.+.++.... .+++|+|+|+.++ +.|+.|+...|+ ++.++++|+.... .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~-~~a~~n~~~~g~--~~~i~~~D~l~~~--------~ 198 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI-SLALVGADLQRQ--KMTLLHQDGLANL--------L 198 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHH-HHHHHHHHHHTC--CCEEEESCTTSCC--------C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHH-HHHHHHHHhCCC--CceEEECCCCCcc--------c
Confidence 567999999999999998876531 4799999999999 999999998887 3789999976531 2
Q ss_pred CCCccEEEECCCCCCcc------------------H-HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 229 DGPFDYMSVTPPYTAVD------------------Y-EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~------------------~-~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+.||+|++||||+... + ...++.+. +.|+|||++++..+
T Consensus 199 ~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~--~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 199 VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGM--RYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHH--HHhCCCCEEEEEEC
Confidence 36899999999975321 1 12344433 48999999988874
No 128
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.34 E-value=5.7e-12 Score=118.85 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=85.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHh--C-C-CCceEEEEecHHHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--G-F-LDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~--g-l-~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
.+.+|||+|||+|.++.++++. +..+|++||+|+.++ +.|++|+... + + .++++++.+|+.+++... .
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~ 149 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELV-EVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT------E 149 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC------C
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHhHhhccccccCCceEEEEchHHHHHHhc------C
Confidence 4689999999999999998876 456899999999999 9999998652 2 2 357999999999886542 4
Q ss_pred CCccEEEECCCCCC---cc-----HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 230 GPFDYMSVTPPYTA---VD-----YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 230 ~~fDlV~~dPPy~~---~~-----~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++||+|++|++... +. ..+.++.+. ++|+|||++++...
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~--~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVK--AHLNPGGVMGMQTG 196 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHH--HhcCCCcEEEEEcc
Confidence 78999999987643 21 356666665 48999999998753
No 129
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=8e-12 Score=112.10 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=83.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHh-CCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~-gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.++.+|||+|||+|.+++.++.. | ..+|+++|+++.++ +.|++|++.+ | .++++++.+|+.+.. ...+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-~~a~~~~~~~~g-~~~v~~~~~d~~~~~-------~~~~ 165 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHL-AQAERNVRAFWQ-VENVRFHLGKLEEAE-------LEEA 165 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHCC-CCCEEEEESCGGGCC-------CCTT
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHhcC-CCCEEEEECchhhcC-------CCCC
Confidence 46789999999999999988876 4 45899999999999 9999999988 8 456999999987651 1236
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
.||+|++|+|.. ...++.+. ++|+|||++++..+..
T Consensus 166 ~~D~v~~~~~~~----~~~l~~~~--~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 166 AYDGVALDLMEP----WKVLEKAA--LALKPDRFLVAYLPNI 201 (258)
T ss_dssp CEEEEEEESSCG----GGGHHHHH--HHEEEEEEEEEEESCH
T ss_pred CcCEEEECCcCH----HHHHHHHH--HhCCCCCEEEEEeCCH
Confidence 799999998743 23444443 3689999999988755
No 130
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.34 E-value=1.1e-11 Score=113.48 Aligned_cols=125 Identities=17% Similarity=0.138 Sum_probs=91.9
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCC---Cce
Q 021116 132 MMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL---DVS 208 (317)
Q Consensus 132 t~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~---~~v 208 (317)
....+++.+.+.+.. .++.+|||+|||+|.+++.++..|+ +|+++|+++.++ +.|++|+...+.. .++
T Consensus 41 ~~~~~~~~l~~~l~~-------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQ-------HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKML-KYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp BCHHHHHHHHHHHHH-------TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTTSHHHHTC
T ss_pred hHHHHHHHHHHHhcc-------cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHhhhhccccccccee
Confidence 345566677777665 3578999999999999999988877 899999999999 9999987543322 247
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEEC-CCC-CCcc-------HHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVT-PPY-TAVD-------YEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~d-PPy-~~~~-------~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
.+..+|+.+..... ...++||+|++. ..+ +..+ ...+++.+. ++|+|||++++..+.
T Consensus 112 ~~~~~d~~~~~~~~----~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEANWLTLDKDV----PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIA--SMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECCGGGHHHHS----CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHH--HTEEEEEEEEEEEEC
T ss_pred eEeecChhhCcccc----ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHH--HHcCCCeEEEEEeCC
Confidence 88999987754221 134789999996 332 2223 556666665 589999999988753
No 131
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.34 E-value=1.1e-12 Score=123.05 Aligned_cols=107 Identities=13% Similarity=0.092 Sum_probs=80.4
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhC---C-CCceEEEEecHHHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTG---F-LDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~g---l-~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
...+|||+|||+|.++.++++. +..+|++||+|+.++ +.|++|+...+ + ..+++++.+|+.+++.. ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi-~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~------~~ 155 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVV-SFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------TS 155 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHH-HHHHHHCHHHHSSCTTCTTCCEECSCSCC---C------CC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHhhhhcccccccCCceEEEEChHHHHHhh------cC
Confidence 4689999999999999998876 467899999999999 99999987653 2 24799999999887643 24
Q ss_pred CCccEEEECCCCCCcc-----HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 230 GPFDYMSVTPPYTAVD-----YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~-----~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++||+|++|++...+. ..+.++.+. +.|+|||++++...
T Consensus 156 ~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~--~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCK--RCLNPGGIFVAQNG 199 (294)
T ss_dssp CCEEEEEECC----------CCHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred CCccEEEECCCCccCcchhccHHHHHHHHH--HhcCCCCEEEEecC
Confidence 6899999998643221 145566554 58999999999764
No 132
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.34 E-value=6.6e-12 Score=116.92 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=86.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++.. |+ +|+++|+++.++ +.++++++..|+.++++++.+|+.++ .++|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~f 156 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQH-ARCEQVLASIDTNRSRQVLLQGWEDF----------AEPV 156 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHTSCCSSCEEEEESCGGGC----------CCCC
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECChHHC----------CCCc
Confidence 35789999999999999988876 66 799999999999 99999999989887899999998653 2689
Q ss_pred cEEEECCCCCC---ccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 233 DYMSVTPPYTA---VDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 233 DlV~~dPPy~~---~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+|++...+.. .+....++.+. ++|+|||++++.....
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCF--NIMPADGRMTVQSSVS 197 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHH--HHSCTTCEEEEEEEEC
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHH--HhcCCCcEEEEEEecc
Confidence 99998754422 24566777665 4899999999876543
No 133
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.33 E-value=8.7e-12 Score=114.68 Aligned_cols=106 Identities=13% Similarity=0.192 Sum_probs=86.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.++..++.. |+ +|+++|+++.++ +.|+++++..|+.++++++.+|+.+. +..+++|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~f 151 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQN-KRNEEYNNQAGLADNITVKYGSFLEI-------PCEDNSY 151 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHHHTCTTTEEEEECCTTSC-------SSCTTCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHH-HHHHHHHHhcCCCcceEEEEcCcccC-------CCCCCCE
Confidence 36789999999999999988776 65 799999999999 99999999999887899999998763 2235789
Q ss_pred cEEEECCC-CCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPP-YTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPP-y~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|++.-. ++..+....++.+. ++|+|||++++...
T Consensus 152 D~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 152 DFIWSQDAFLHSPDKLKVFQECA--RVLKPRGVMAITDP 188 (297)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred eEEEecchhhhcCCHHHHHHHHH--HHcCCCeEEEEEEe
Confidence 99998643 33445677777775 48999999998754
No 134
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.33 E-value=6.3e-13 Score=122.87 Aligned_cols=80 Identities=20% Similarity=0.235 Sum_probs=66.0
Q ss_pred CeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh-------C-CCCceEEEEecHHHHHHHHhhhcCC
Q 021116 157 GRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT-------G-FLDVSSIHTVRVETFLERAEQFVGK 228 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~-------g-l~~~v~ii~gD~~~~l~~~~~~~~~ 228 (317)
.+|||+|||+|..+++++++|+ +|++||+++.++ +++++|++.. + +.++++++++|+.+++...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~-~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~------ 161 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVA-ALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI------ 161 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHH-HHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC------
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC------
Confidence 7999999999999999999987 599999999886 7777776543 3 4356999999999886433
Q ss_pred CCCccEEEECCCCCCc
Q 021116 229 DGPFDYMSVTPPYTAV 244 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~ 244 (317)
.+.||+|++||||...
T Consensus 162 ~~~fDvV~lDP~y~~~ 177 (258)
T 2oyr_A 162 TPRPQVVYLDPMFPHK 177 (258)
T ss_dssp SSCCSEEEECCCCCCC
T ss_pred cccCCEEEEcCCCCCc
Confidence 2469999999999653
No 135
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.33 E-value=7.8e-12 Score=111.95 Aligned_cols=105 Identities=15% Similarity=0.099 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+. +|+++|+++.++ +.++++++.+++. +++++.+|+.+. +..+++||
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~~-~v~~~~~d~~~~-------~~~~~~fD 89 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMV-EVASSFAQEKGVE-NVRFQQGTAESL-------PFPDDSFD 89 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHH-HHHHHHHHHHTCC-SEEEEECBTTBC-------CSCTTCEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHH-HHHHHHHHHcCCC-CeEEEecccccC-------CCCCCcEE
Confidence 4688999999999999998888775 899999999999 9999999998885 599999998653 22357899
Q ss_pred EEEECCCC-CCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPY-TAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy-~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.-.. +..+....+..+. ++|+|||++++...
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVA--RVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEECCchhhccCHHHHHHHHH--HHcCCCcEEEEEEc
Confidence 99987432 3345667777765 48999999988643
No 136
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.32 E-value=4e-12 Score=120.35 Aligned_cols=107 Identities=18% Similarity=0.217 Sum_probs=82.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHh--CC-CCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~--gl-~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.+.+|||+|||+|.++.++++. +..+|++||+|+.++ +.|++|+..+ ++ .++++++.+|+.+++... .+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~~ 180 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVI-DVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------KN 180 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHH-HHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------TT
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------CC
Confidence 4689999999999999998876 356899999999999 9999998754 44 457999999999887542 46
Q ss_pred CccEEEECCCCCCc----cH-HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 231 PFDYMSVTPPYTAV----DY-EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~----~~-~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+||+|++|++.... .+ .+.++.+. ++|+|||++++...
T Consensus 181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~--~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 181 EFDVIITDSSDPVGPAESLFGQSYYELLR--DALKEDGILSSQGE 223 (314)
T ss_dssp CEEEEEECCC-------------HHHHHH--HHEEEEEEEEEECC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHH--hhcCCCeEEEEECC
Confidence 89999999863221 12 45555554 48999999999864
No 137
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.32 E-value=5.3e-12 Score=118.62 Aligned_cols=116 Identities=16% Similarity=0.056 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEE
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga--~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii 211 (317)
..+...+.+.+.. .++.+|||+|||+|.+++.++..+. .+|+++|+++.++ +.|++|++.+|+.+ ++++
T Consensus 61 ~~~~~~l~~~l~~-------~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~g~~~-v~~~ 131 (317)
T 1dl5_A 61 PSLMALFMEWVGL-------DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKIC-EIAKRNVERLGIEN-VIFV 131 (317)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHTTCCS-EEEE
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHH-HHHHHHHHHcCCCC-eEEE
Confidence 3445555555543 4678999999999999998887643 4699999999999 99999999999866 9999
Q ss_pred EecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 212 TVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 212 ~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
.+|+.+... ..++||+|+++++...-. +.+. +.|+|||++++.+...
T Consensus 132 ~~d~~~~~~-------~~~~fD~Iv~~~~~~~~~-----~~~~--~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 132 CGDGYYGVP-------EFSPYDVIFVTVGVDEVP-----ETWF--TQLKEGGRVIVPINLK 178 (317)
T ss_dssp ESCGGGCCG-------GGCCEEEEEECSBBSCCC-----HHHH--HHEEEEEEEEEEBCBG
T ss_pred ECChhhccc-------cCCCeEEEEEcCCHHHHH-----HHHH--HhcCCCcEEEEEECCC
Confidence 999876432 136799999998865322 2222 2689999999987654
No 138
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.32 E-value=6.1e-12 Score=112.21 Aligned_cols=106 Identities=10% Similarity=-0.042 Sum_probs=79.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
++.+|||+|||+|.+++.+++. | ..+|+++|+++.++ +.+.+|++.+ ++++++.+|+.+... ++...++|
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i-~~~~~~a~~~---~~v~~~~~d~~~~~~----~~~~~~~~ 148 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSG-RDLINLAKKR---TNIIPVIEDARHPHK----YRMLIAMV 148 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHC---TTEEEECSCTTCGGG----GGGGCCCE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHhhcc---CCeEEEEcccCChhh----hcccCCcE
Confidence 5789999999999999988775 3 35899999999998 8888888775 458999999876321 01124689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+|++|+|. ......++..+. ++|+|||++++++..
T Consensus 149 D~V~~~~~~-~~~~~~~~~~~~--~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 149 DVIFADVAQ-PDQTRIVALNAH--TFLRNGGHFVISIKA 184 (233)
T ss_dssp EEEEECCCC-TTHHHHHHHHHH--HHEEEEEEEEEEEEH
T ss_pred EEEEEcCCC-ccHHHHHHHHHH--HHcCCCeEEEEEEcc
Confidence 999999982 222333344443 489999999998764
No 139
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.32 E-value=5.2e-12 Score=115.31 Aligned_cols=109 Identities=15% Similarity=0.056 Sum_probs=85.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcC-CCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVG-KDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~-~~~~f 232 (317)
.++.+|||+|||+|.++..++..|..+|+++|+++.++ +.|++++...+..++++++++|+.+.. . ..++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~~f 134 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSI-NDARVRARNMKRRFKVFFRAQDSYGRH-------MDLGKEF 134 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHH-HHHHHHHHTSCCSSEEEEEESCTTTSC-------CCCSSCE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhcCCCccEEEEECCccccc-------cCCCCCc
Confidence 35789999999999999988877776899999999999 999999998887677999999987641 1 24689
Q ss_pred cEEEECCCCCC--c---cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 233 DYMSVTPPYTA--V---DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 233 DlV~~dPPy~~--~---~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+|+++-..+. . +....++.+. ++|+|||++++..+..
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIA--RHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHH--HTEEEEEEEEEEEECH
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHH--HhcCCCCEEEEEECCH
Confidence 99998754322 1 2344555554 5899999999887643
No 140
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.32 E-value=3.5e-12 Score=112.20 Aligned_cols=101 Identities=14% Similarity=-0.039 Sum_probs=73.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhC-----------CCCceEEEEecHHHHHHHHh
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG-----------FLDVSSIHTVRVETFLERAE 223 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~g-----------l~~~v~ii~gD~~~~l~~~~ 223 (317)
++.+|||+|||+|..+..++++|. +|++||+++.|+ +.|+++.+... ...+++++++|+.+.....
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~- 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAV-ERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD- 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHH-HHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH-
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHH-HHHHHHccCCcccccccccccccCCccEEEECccccCCccc-
Confidence 578999999999999999888886 799999999999 99988764310 0245899999987753210
Q ss_pred hhcCCCCCccEEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEE
Q 021116 224 QFVGKDGPFDYMSVTPPYTAV---DYEVLMAQISKSALVGKDSFI 265 (317)
Q Consensus 224 ~~~~~~~~fDlV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~i 265 (317)
.++||+|+..-.+..- .....++.+. ++|+|||++
T Consensus 99 -----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~--r~LkpgG~~ 136 (203)
T 1pjz_A 99 -----IGHCAAFYDRAAMIALPADMRERYVQHLE--ALMPQACSG 136 (203)
T ss_dssp -----HHSEEEEEEESCGGGSCHHHHHHHHHHHH--HHSCSEEEE
T ss_pred -----CCCEEEEEECcchhhCCHHHHHHHHHHHH--HHcCCCcEE
Confidence 1579999975443221 1233455554 589999983
No 141
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.32 E-value=1.1e-11 Score=113.51 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=83.8
Q ss_pred CCCCeEEEECCCcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++ ..|+ +|+++|+++.++ +.++++++..++.++++++.+|+.++ .++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~-~~a~~~~~~~~~~~~~~~~~~d~~~~----------~~~f 130 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQA-NHVQQLVANSENLRSKRVLLAGWEQF----------DEPV 130 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHH-HHHHHHHHTCCCCSCEEEEESCGGGC----------CCCC
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHhcCCCCCeEEEECChhhC----------CCCe
Confidence 357899999999999999887 4565 899999999999 99999999888877899999998653 2689
Q ss_pred cEEEECCCCC-C--ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYT-A--VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~-~--~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|++.-.+. . .+....++.+. ++|+|||++++...
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAH--RLLPADGVMLLHTI 169 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHH--HHSCTTCEEEEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHH--HhcCCCCEEEEEEe
Confidence 9999864432 1 24566777765 48999999998764
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=1.3e-11 Score=108.19 Aligned_cols=114 Identities=12% Similarity=0.046 Sum_probs=86.6
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 136 v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga--~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
+...+...+.. .++.+|||+|||+|.+++.++..+. .+|+++|+++.++ +.+++|++.+++.+ ++++.+
T Consensus 65 ~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~-v~~~~~ 135 (215)
T 2yxe_A 65 MVGMMCELLDL-------KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELA-EKAERTLRKLGYDN-VIVIVG 135 (215)
T ss_dssp HHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHHTCTT-EEEEES
T ss_pred HHHHHHHhhCC-------CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-eEEEEC
Confidence 44455555532 4678999999999999998877652 5899999999999 99999999998865 999999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+..... ..++||+|+++.++.... +.+. ++|+|||++++..+..
T Consensus 136 d~~~~~~-------~~~~fD~v~~~~~~~~~~-----~~~~--~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 136 DGTLGYE-------PLAPYDRIYTTAAGPKIP-----EPLI--RQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGGCCG-------GGCCEEEEEESSBBSSCC-----HHHH--HTEEEEEEEEEEESSS
T ss_pred CcccCCC-------CCCCeeEEEECCchHHHH-----HHHH--HHcCCCcEEEEEECCC
Confidence 9854321 136799999997654311 2332 3799999999988754
No 143
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.31 E-value=6.1e-12 Score=113.59 Aligned_cols=109 Identities=14% Similarity=0.070 Sum_probs=82.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHh--------CCCCceEEEEecHHHHHHHHhhh
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWT--------GFLDVSSIHTVRVETFLERAEQF 225 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~--------gl~~~v~ii~gD~~~~l~~~~~~ 225 (317)
++.+|||+|||+|.+++.++..+. .+|++||+++.++ +.|++|++.+ ++. +++++++|+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~--- 123 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVT-NYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNF--- 123 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHH-HHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGT---
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHH-HHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHh---
Confidence 567999999999999999888764 4899999999999 9999999887 775 5999999998754321
Q ss_pred cCCCCCccEEEECC--CCCCc-------cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 226 VGKDGPFDYMSVTP--PYTAV-------DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 226 ~~~~~~fDlV~~dP--Py~~~-------~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
.....+|.|+++- |+.+. .+..+++.+. ++|+|||++++.+..
T Consensus 124 -~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~--~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 124 -FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYA--YVLKEGGVVYTITDV 175 (246)
T ss_dssp -SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHH--HHEEEEEEEEEEESC
T ss_pred -ccccccCEEEEECCCcccccchhHHhhccHHHHHHHH--HHcCCCCEEEEEecc
Confidence 1246799887642 22211 1245666665 489999999997654
No 144
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.31 E-value=2.6e-12 Score=126.51 Aligned_cols=123 Identities=18% Similarity=0.109 Sum_probs=91.9
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc--------------CCCEEEEEeCCHHHHHHHH
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--------------GCSEVHFVEMDPWVVSNVL 195 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~--------------Ga~~V~aVDin~~al~~~a 195 (317)
..|...+.+.+.+.+.. ..+.+|||+|||||.+.+.++.. ...+++|+|+|+.++ ++|
T Consensus 153 fyTP~~v~~~mv~~l~~-------~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~-~lA 224 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINP-------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVV-TLA 224 (445)
T ss_dssp GCCCHHHHHHHHHHHCC-------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHH-HHH
T ss_pred ccCcHHHHHHHHHHhCC-------CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHH-HHH
Confidence 45667778888887754 35779999999999999987653 123599999999998 999
Q ss_pred HHhHHHhCCCC-ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccH------------------HHHHHHHHHc
Q 021116 196 IPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDY------------------EVLMAQISKS 256 (317)
Q Consensus 196 r~N~~~~gl~~-~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~------------------~~~l~~L~~~ 256 (317)
+.|+...|+.+ .++++++|..... ...+||+|++||||..... ...++.+.
T Consensus 225 ~~nl~l~g~~~~~~~i~~gD~l~~~--------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~-- 294 (445)
T 2okc_A 225 SMNLYLHGIGTDRSPIVCEDSLEKE--------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMM-- 294 (445)
T ss_dssp HHHHHHTTCCSSCCSEEECCTTTSC--------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHH--
T ss_pred HHHHHHhCCCcCCCCEeeCCCCCCc--------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHH--
Confidence 99999988852 4778999976531 1248999999999974210 13344433
Q ss_pred CCcCCCeEEEEEeC
Q 021116 257 ALVGKDSFIVVEYP 270 (317)
Q Consensus 257 ~lLkpgG~ivv~~~ 270 (317)
++|++||++.+..+
T Consensus 295 ~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 295 LMLKTGGRAAVVLP 308 (445)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhccCCEEEEEEC
Confidence 47999999876654
No 145
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.31 E-value=6.8e-12 Score=123.00 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=82.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|..++.++..+. .+|+++|+++.++ +.+++|++.+|+. ++++++|+.+....+ ..+.|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l-~~~~~~~~~~g~~--~~~~~~D~~~~~~~~-----~~~~f 316 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL-SRVYDNLKRLGMK--ATVKQGDGRYPSQWC-----GEQQF 316 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTH-HHHHHHHHHTTCC--CEEEECCTTCTHHHH-----TTCCE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHHcCCC--eEEEeCchhhchhhc-----ccCCC
Confidence 4678999999999999998887643 5899999999999 9999999999983 789999987764333 13679
Q ss_pred cEEEECCCCCC-cc---------------H-------HHHHHHHHHcCCcCCCeEEEEEe
Q 021116 233 DYMSVTPPYTA-VD---------------Y-------EVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 233 DlV~~dPPy~~-~~---------------~-------~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+|++||||.. +. . ..+++.+ .++|+|||++++++
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a--~~~LkpGG~lvyst 374 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAI--WPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHH--GGGEEEEEEEEEEE
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHH--HHhcCCCCEEEEEE
Confidence 99999999853 11 0 1233333 46899999998765
No 146
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.31 E-value=2.5e-11 Score=105.06 Aligned_cols=104 Identities=13% Similarity=-0.010 Sum_probs=81.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++ +|||+|||+|.++..+++.|. +|+++|+++.++ +.|+++++..+. +++++++|+.+.. ...++||+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~~-------~~~~~fD~ 97 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGL-AKAKQLAQEKGV--KITTVQSNLADFD-------IVADAWEG 97 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHH-HHHHHHHHHHTC--CEEEECCBTTTBS-------CCTTTCSE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEcChhhcC-------CCcCCccE
Confidence 45 999999999999998888876 799999999999 999999988876 4899999987641 23468999
Q ss_pred EEECCCCCC-ccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 235 MSVTPPYTA-VDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 235 V~~dPPy~~-~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|++...+.. ......++.+. ++|+|||++++.....
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVY--QGLKPGGVFILEGFAP 134 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHH--TTCCSSEEEEEEEECT
T ss_pred EEEEhhcCCHHHHHHHHHHHH--HhcCCCcEEEEEEecc
Confidence 998643221 13445555554 6999999999986543
No 147
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.31 E-value=7e-12 Score=115.14 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=83.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHh-CCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~-gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.++.+|||+|||+|.+++.++.. +..+|+++|+++.++ +.|++|++.+ |. ++++++.+|+.+.+ ..+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~g~-~~v~~~~~d~~~~~--------~~~ 178 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNL-KKAMDNLSEFYDI-GNVRTSRSDIADFI--------SDQ 178 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHH-HHHHHHHHTTSCC-TTEEEECSCTTTCC--------CSC
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHHHhcCCC-CcEEEEECchhccC--------cCC
Confidence 35789999999999999988775 245899999999999 9999999988 85 45999999987632 236
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+||+|++|+|.. ...++.+. ++|+|||++++.++..
T Consensus 179 ~fD~Vi~~~~~~----~~~l~~~~--~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 179 MYDAVIADIPDP----WNHVQKIA--SMMKPGSVATFYLPNF 214 (275)
T ss_dssp CEEEEEECCSCG----GGSHHHHH--HTEEEEEEEEEEESSH
T ss_pred CccEEEEcCcCH----HHHHHHHH--HHcCCCCEEEEEeCCH
Confidence 799999998743 34455554 3799999999988755
No 148
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.1e-11 Score=114.47 Aligned_cols=109 Identities=12% Similarity=0.077 Sum_probs=82.8
Q ss_pred CCCeEEEECCCcchHHHHHHH--cCCCEEEEEeCCHHHHHHHHHHhHHHh-CCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAIS--RGCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas--~Ga~~V~aVDin~~al~~~ar~N~~~~-gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
++.+|||+|||+|.++..++. .+..+|+++|+++.++ +.|++|++.. +..++++++++|+.++..... .....++
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMI-KTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-DSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHH-HHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT-TTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHH-HHHHHHHHhccCCCCceEEEEcCHHhCCcccc-ccccCCC
Confidence 578999999999999998875 3556899999999999 9999999887 445679999999876421000 0000168
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
||+|++.-..+..+....++.+. ++|+|||++++
T Consensus 114 fD~V~~~~~l~~~~~~~~l~~~~--~~LkpgG~l~i 147 (299)
T 3g5t_A 114 IDMITAVECAHWFDFEKFQRSAY--ANLRKDGTIAI 147 (299)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHH--HHEEEEEEEEE
T ss_pred eeEEeHhhHHHHhCHHHHHHHHH--HhcCCCcEEEE
Confidence 99999976543336677777775 48999999987
No 149
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.31 E-value=1.2e-11 Score=109.45 Aligned_cols=107 Identities=19% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhHHHhCC----CCceEEEEecHHHHHHHHh
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGC------SEVHFVEMDPWVVSNVLIPNLEWTGF----LDVSSIHTVRVETFLERAE 223 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga------~~V~aVDin~~al~~~ar~N~~~~gl----~~~v~ii~gD~~~~l~~~~ 223 (317)
.++.+|||+|||+|.+++.++.... .+|+++|+++.++ +.|++|++.+++ .++++++.+|+.+......
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLV-NFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHH-HHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHH-HHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 3578999999999999998877543 4899999999999 999999998883 3469999999876421000
Q ss_pred hhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 224 QFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 224 ~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
...++||+|+++.++.. +++.+. +.|+|||++++....
T Consensus 158 ---~~~~~fD~I~~~~~~~~-----~~~~~~--~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 ---KELGLFDAIHVGASASE-----LPEILV--DLLAENGKLIIPIEE 195 (227)
T ss_dssp ---HHHCCEEEEEECSBBSS-----CCHHHH--HHEEEEEEEEEEEEE
T ss_pred ---ccCCCcCEEEECCchHH-----HHHHHH--HhcCCCcEEEEEEcc
Confidence 00267999999987642 123332 268999999998874
No 150
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.31 E-value=2.8e-12 Score=119.10 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=77.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCC---------------------------
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFL--------------------------- 205 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~--------------------------- 205 (317)
.++.+|||+|||+|.+++.++.. +..+|++||+++.++ +.|++|++..+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i-~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI-HSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHH-HHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 36789999999999999998876 556899999999999 9999998876533
Q ss_pred ------------------------------CceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc-------cHHH
Q 021116 206 ------------------------------DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-------DYEV 248 (317)
Q Consensus 206 ------------------------------~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-------~~~~ 248 (317)
++++++++|+......+ ++...++||+|++......- ....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~--~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDL--VEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHH--HTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCcccc--ccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 57999999986432111 01235789999997532111 2334
Q ss_pred HHHHHHHcCCcCCCeEEEEEe
Q 021116 249 LMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 249 ~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+++.+. ++|+|||+++++.
T Consensus 202 ~l~~~~--~~LkpGG~lil~~ 220 (292)
T 3g07_A 202 MFRRIY--RHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHH--HHEEEEEEEEEEC
T ss_pred HHHHHH--HHhCCCcEEEEec
Confidence 445444 5899999999974
No 151
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.30 E-value=8.1e-12 Score=111.51 Aligned_cols=103 Identities=14% Similarity=0.044 Sum_probs=79.1
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.+++.++.. |..+|+++|+++.++ +.|++|++.+ ++++++.+|+.+..... +. .+.||
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~-~~a~~~~~~~---~~v~~~~~d~~~~~~~~---~~-~~~~D 145 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIM-RELLDACAER---ENIIPILGDANKPQEYA---NI-VEKVD 145 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHH-HHHHHHTTTC---TTEEEEECCTTCGGGGT---TT-SCCEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHH-HHHHHHhhcC---CCeEEEECCCCCccccc---cc-CccEE
Confidence 5789999999999999988876 556899999999999 9999998765 45999999987621100 11 26799
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|+.|+|.. ......++.+. ++|+|||++++.
T Consensus 146 ~v~~~~~~~-~~~~~~l~~~~--~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQP-NQAEILIKNAK--WFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCST-THHHHHHHHHH--HHEEEEEEEEEE
T ss_pred EEEEecCCh-hHHHHHHHHHH--HhCCCCcEEEEE
Confidence 999987532 23455566654 479999999985
No 152
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.30 E-value=2.7e-11 Score=105.63 Aligned_cols=116 Identities=19% Similarity=0.173 Sum_probs=86.8
Q ss_pred HHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHH
Q 021116 138 GAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (317)
Q Consensus 138 ~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~ 217 (317)
..++..+.. ..+.+|||+|||+|.++..++..|. +|+++|+++.++ +.++++ .+++++.+|+.+
T Consensus 42 ~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~-------~~~~~~~~~~~~ 105 (227)
T 3e8s_A 42 QAILLAILG-------RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLV-DAARAA-------GAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHHHHH-------TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHH-HHHHHT-------CSSCEEECCHHH
T ss_pred HHHHHHhhc-------CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHh-------cccccchhhHHh
Confidence 345555554 3578999999999999998888866 799999999999 999887 235688899877
Q ss_pred HHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 218 FLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 218 ~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
..... .....+||+|++...+...+....++.+. ++|+|||++++.......
T Consensus 106 ~~~~~---~~~~~~fD~v~~~~~l~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 106 LAEAK---VPVGKDYDLICANFALLHQDIIELLSAMR--TLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp HHTTC---SCCCCCEEEEEEESCCCSSCCHHHHHHHH--HTEEEEEEEEEEECCTTT
T ss_pred hcccc---cccCCCccEEEECchhhhhhHHHHHHHHH--HHhCCCeEEEEEecCccc
Confidence 63211 01234599999987766556677777776 489999999998765433
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.30 E-value=1.4e-11 Score=109.11 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEec
Q 021116 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR 214 (317)
Q Consensus 135 ~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD 214 (317)
.+...+.+.+.. .++.+|||+|||+|.++..++..+ .+|+++|+++.++ +.+++|+..++ +++++.+|
T Consensus 57 ~~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~-~~a~~~~~~~~---~v~~~~~d 124 (231)
T 1vbf_A 57 NLGIFMLDELDL-------HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMY-NYASKLLSYYN---NIKLILGD 124 (231)
T ss_dssp HHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHH-HHHHHHHTTCS---SEEEEESC
T ss_pred HHHHHHHHhcCC-------CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHH-HHHHHHHhhcC---CeEEEECC
Confidence 445555555533 467899999999999999888877 5899999999999 99999998776 58999999
Q ss_pred HHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 215 VETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 215 ~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+.+.+. ..++||+|+++.++..- . +.+. ++|+|||++++..+..
T Consensus 125 ~~~~~~-------~~~~fD~v~~~~~~~~~-~----~~~~--~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 125 GTLGYE-------EEKPYDRVVVWATAPTL-L----CKPY--EQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCG-------GGCCEEEEEESSBBSSC-C----HHHH--HTEEEEEEEEEEECSS
T ss_pred cccccc-------cCCCccEEEECCcHHHH-H----HHHH--HHcCCCcEEEEEEcCC
Confidence 876321 13689999999765421 1 2232 3799999999988754
No 154
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.30 E-value=5.2e-12 Score=124.71 Aligned_cols=108 Identities=12% Similarity=0.031 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|..++.++.. +..+|+++|+++.++ +.+++|++.+|+.+ ++++++|+.++...+ .++.
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l-~~~~~~~~~~g~~~-v~~~~~D~~~~~~~~-----~~~~ 330 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRM-KRLKDFVKRMGIKI-VKPLVKDARKAPEII-----GEEV 330 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-HHHHHHHHHTTCCS-EEEECSCTTCCSSSS-----CSSC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHH-HHHHHHHHHcCCCc-EEEEEcChhhcchhh-----ccCC
Confidence 46789999999999999987763 325899999999999 99999999999864 999999987642111 1257
Q ss_pred ccEEEECCCCCC-cc---------------H-------HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 232 FDYMSVTPPYTA-VD---------------Y-------EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 232 fDlV~~dPPy~~-~~---------------~-------~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
||+|++|||+.. +. . ..+++.+ .++|+|||++++.+-
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a--~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESA--ARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHH--HTTEEEEEEEEEEES
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHH--HHhcCCCcEEEEEeC
Confidence 999999999853 21 0 2333333 379999999886543
No 155
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.30 E-value=8.8e-12 Score=111.49 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+...+.+.+.. .++.+|||+|||+|.+++.++..+..+|+++|+++.++ +.|++|++.+++.+ ++++.+
T Consensus 77 ~~~~~~~~~~l~~-------~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~-v~~~~~ 147 (235)
T 1jg1_A 77 PHMVAIMLEIANL-------KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELV-EFAKRNLERAGVKN-VHVILG 147 (235)
T ss_dssp HHHHHHHHHHHTC-------CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHH-HHHHHHHHHTTCCS-EEEEES
T ss_pred HHHHHHHHHhcCC-------CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHH-HHHHHHHHHcCCCC-cEEEEC
Confidence 4455566666643 46789999999999999988776425799999999999 99999999999865 999999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
|+...+. ....||+|+++.+.... .. .+. +.|+|||++++.++...
T Consensus 148 d~~~~~~-------~~~~fD~Ii~~~~~~~~-~~----~~~--~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 148 DGSKGFP-------PKAPYDVIIVTAGAPKI-PE----PLI--EQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CGGGCCG-------GGCCEEEEEECSBBSSC-CH----HHH--HTEEEEEEEEEEECSSS
T ss_pred CcccCCC-------CCCCccEEEECCcHHHH-HH----HHH--HhcCCCcEEEEEEecCC
Confidence 9732211 12459999998764321 12 232 37999999999988553
No 156
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.30 E-value=8.9e-12 Score=117.62 Aligned_cols=108 Identities=15% Similarity=0.044 Sum_probs=80.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHhHHHhC----------CCCceEEEEecHHHHHHH
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPWVVSNVLIPNLEWTG----------FLDVSSIHTVRVETFLER 221 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga-~~V~aVDin~~al~~~ar~N~~~~g----------l~~~v~ii~gD~~~~l~~ 221 (317)
.++.+|||+|||+|.+++.++.. |. .+|+++|+++.++ +.|++|++.++ ..++++++.+|+.+....
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHH-DLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHH-HHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 46889999999999999988876 54 6899999999999 99999998643 235699999998765321
Q ss_pred HhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 222 AEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 222 ~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+ ..++||+|++|+|.... .++.+. +.|+|||++++..+...
T Consensus 183 ~-----~~~~fD~V~~~~~~~~~----~l~~~~--~~LkpgG~lv~~~~~~~ 223 (336)
T 2b25_A 183 I-----KSLTFDAVALDMLNPHV----TLPVFY--PHLKHGGVCAVYVVNIT 223 (336)
T ss_dssp ----------EEEEEECSSSTTT----THHHHG--GGEEEEEEEEEEESSHH
T ss_pred c-----CCCCeeEEEECCCCHHH----HHHHHH--HhcCCCcEEEEEeCCHH
Confidence 1 13579999999864322 344443 58999999998776443
No 157
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.30 E-value=8.3e-12 Score=110.57 Aligned_cols=103 Identities=11% Similarity=0.087 Sum_probs=80.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.++..++... ..+|+++|+++.++ +.|++++...+ +++++++|+.+.. . .++|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~---~~~~~~~d~~~~~-------~-~~~f 110 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKML-EIAKNRFRGNL---KVKYIEADYSKYD-------F-EEKY 110 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHTCSCT---TEEEEESCTTTCC-------C-CSCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHhhccCC---CEEEEeCchhccC-------C-CCCc
Confidence 467899999999999999888763 45899999999999 99999987654 5999999987642 1 2689
Q ss_pred cEEEECCCCCCccHH---HHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTAVDYE---VLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~~~~~---~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|+++..+....-. ..++.+. ++|+|||++++...
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSY--SILKESGIFINADL 149 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred eEEEEeCccccCCHHHHHHHHHHHH--HhcCCCcEEEEEEe
Confidence 999998665432222 3555554 58999999998763
No 158
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.30 E-value=1.3e-11 Score=110.85 Aligned_cols=103 Identities=11% Similarity=0.116 Sum_probs=82.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..|..+|+++|+++.++ +.+++++. ..+++++.+|+.++ +...++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~----~~~~~~~~~d~~~~-------~~~~~~fD 110 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERML-TEAKRKTT----SPVVCYEQKAIEDI-------AIEPDAYN 110 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHCC----CTTEEEEECCGGGC-------CCCTTCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHH-HHHHHhhc----cCCeEEEEcchhhC-------CCCCCCeE
Confidence 36889999999999999999888877899999999999 99998875 34589999998754 22357899
Q ss_pred EEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.-.+. ..+....++.+. ++|+|||++++...
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVY--INLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEEchhhhhhhhHHHHHHHHH--HHcCCCcEEEEEeC
Confidence 999875432 235667777765 48999999999754
No 159
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.30 E-value=6.8e-12 Score=109.84 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=80.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+. +|+++|+++.++ +.+++|+...+ +++++++|+.+.. ..++||
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~---~~~~~~~d~~~~~--------~~~~fD 116 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAI-GRACQRTKRWS---HISWAATDILQFS--------TAELFD 116 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHH-HHHHHHTTTCS---SEEEEECCTTTCC--------CSCCEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHhcccCC---CeEEEEcchhhCC--------CCCCcc
Confidence 3578999999999999998888875 799999999999 99999987643 5999999987653 247899
Q ss_pred EEEECCCCCC-ccH---HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTA-VDY---EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~-~~~---~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|+++..+.. .+. ...++.+. ++|+|||++++...
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMV--KMLAPGGHLVFGSA 155 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHH--HHcCCCCEEEEEec
Confidence 9999765432 233 34455554 58999999999753
No 160
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.30 E-value=5.7e-12 Score=113.01 Aligned_cols=122 Identities=10% Similarity=0.019 Sum_probs=88.9
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 129 ~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
.++......+.+.+.+.. .++.+|||+|||+|.++..++.....+|+++|+++.++ +.+++++... +++
T Consensus 36 ~~~~~~~~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~---~~~ 104 (266)
T 3ujc_A 36 ISSGGLEATKKILSDIEL-------NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIV-NMANERVSGN---NKI 104 (266)
T ss_dssp CSTTHHHHHHHHTTTCCC-------CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHH-HHHHHTCCSC---TTE
T ss_pred cccchHHHHHHHHHhcCC-------CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhhcC---CCe
Confidence 355555555555444322 36789999999999999988876234799999999999 9999887654 469
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-C--ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-A--VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-~--~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+++.+|+.+. +..+++||+|++..... . .+....++.+. ++|+|||++++...
T Consensus 105 ~~~~~d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 105 IFEANDILTK-------EFPENNFDLIYSRDAILALSLENKNKLFQKCY--KWLKPTGTLLITDY 160 (266)
T ss_dssp EEEECCTTTC-------CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEECccccC-------CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHH--HHcCCCCEEEEEEe
Confidence 9999998764 12357899999975433 2 24455566554 58999999998764
No 161
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.30 E-value=1.6e-11 Score=111.94 Aligned_cols=105 Identities=15% Similarity=0.089 Sum_probs=82.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHh-C-CCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWT-G-FLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~-g-l~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
.++.+|||+|||+|.+++.++.. + ..+|+++|+++.++ +.|++|++.+ | +.++++++.+|+.+.. ...
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~g~~~~~v~~~~~d~~~~~-------~~~ 169 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHA-EHARRNVSGCYGQPPDNWRLVVSDLADSE-------LPD 169 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHHHTSCCTTEEEECSCGGGCC-------CCT
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHhcCCCCCcEEEEECchHhcC-------CCC
Confidence 46789999999999999988774 3 45899999999999 9999999988 5 4456999999987641 124
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+.||+|++|+|.. ...++.+. ++|+|||++++..+..
T Consensus 170 ~~~D~v~~~~~~~----~~~l~~~~--~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 170 GSVDRAVLDMLAP----WEVLDAVS--RLLVAGGVLMVYVATV 206 (280)
T ss_dssp TCEEEEEEESSCG----GGGHHHHH--HHEEEEEEEEEEESSH
T ss_pred CceeEEEECCcCH----HHHHHHHH--HhCCCCCEEEEEeCCH
Confidence 6799999998732 23444443 3689999999987654
No 162
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.29 E-value=1.9e-11 Score=108.18 Aligned_cols=120 Identities=11% Similarity=0.116 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE
Q 021116 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT 212 (317)
Q Consensus 133 ~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~ 212 (317)
.....+.+...+... ..++.+|||+|||+|.++..++..|. +|+++|+++.++ +.+++++...+. ++++++
T Consensus 20 ~~~~~~~~~~~l~~~-----~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~-~~a~~~~~~~~~--~~~~~~ 90 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN-----NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEML-SEAENKFRSQGL--KPRLAC 90 (246)
T ss_dssp HHHHHHHHHHHHHTT-----TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHH-HHHHHHHHHTTC--CCEEEC
T ss_pred HHHHHHHHHHHHHHh-----CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHH-HHHHHHHhhcCC--CeEEEe
Confidence 344556666666542 13678999999999999998888875 799999999999 999999988776 488999
Q ss_pred ecHHHHHHHHhhhcCCCCCccEEEECC-CCCC----ccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 213 VRVETFLERAEQFVGKDGPFDYMSVTP-PYTA----VDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 213 gD~~~~l~~~~~~~~~~~~fDlV~~dP-Py~~----~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|+.+.. . .++||+|++.. .+.. ......++.+. ++|+|||+++++...
T Consensus 91 ~d~~~~~-------~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 91 QDISNLN-------I-NRKFDLITCCLDSTNYIIDSDDLKKYFKAVS--NHLKEGGVFIFDINS 144 (246)
T ss_dssp CCGGGCC-------C-SCCEEEEEECTTGGGGCCSHHHHHHHHHHHH--TTEEEEEEEEEEEEC
T ss_pred cccccCC-------c-cCCceEEEEcCccccccCCHHHHHHHHHHHH--HhcCCCcEEEEEecC
Confidence 9987642 1 26899999976 4322 13344555554 699999999997654
No 163
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.29 E-value=7.8e-12 Score=108.42 Aligned_cols=107 Identities=15% Similarity=0.134 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.++..|..+|+++|+++.++ +.+++|+.. . ++++++.+|+.+. +...++||
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~-~~a~~~~~~--~-~~i~~~~~d~~~~-------~~~~~~fD 109 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVV-AAMQACYAH--V-PQLRWETMDVRKL-------DFPSASFD 109 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHH-HHHHHHTTT--C-TTCEEEECCTTSC-------CSCSSCEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHH-HHHHHhccc--C-CCcEEEEcchhcC-------CCCCCccc
Confidence 35789999999999999999888866899999999999 999998764 2 4589999998764 12346899
Q ss_pred EEEECCCCCCc----------------cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 234 YMSVTPPYTAV----------------DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 234 lV~~dPPy~~~----------------~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+|++++++... .....++.+. ++|+|||++++......
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVS--RVLVPGGRFISMTSAAP 163 (215)
T ss_dssp EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHH--HHEEEEEEEEEEESCCH
T ss_pred EEEECcchhhhccccccccccccchhHHHHHHHHHHH--HhCcCCCEEEEEeCCCc
Confidence 99998765210 2234444443 58999999998876553
No 164
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.29 E-value=5.4e-12 Score=116.05 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=78.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
.+.+|||+|||+|.++..++..|. +|++||+|+.++ +.|+++ .+++++++|+.+. +..+++||+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml-~~a~~~-------~~v~~~~~~~e~~-------~~~~~sfD~ 102 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQI-RQALRH-------PRVTYAVAPAEDT-------GLPPASVDV 102 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHH-HTCCCC-------TTEEEEECCTTCC-------CCCSSCEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhh-hhhhhc-------CCceeehhhhhhh-------cccCCcccE
Confidence 467999999999999998887775 799999999998 776532 3589999998754 345689999
Q ss_pred EEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|++.--++..+.+..+..+. ++|+|||++++...
T Consensus 103 v~~~~~~h~~~~~~~~~e~~--rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 103 AIAAQAMHWFDLDRFWAELR--RVARPGAVFAAVTY 136 (257)
T ss_dssp EEECSCCTTCCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEeeehhHhhHHHHHHHHH--HHcCCCCEEEEEEC
Confidence 99976666666777777765 58999999977654
No 165
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.29 E-value=3.9e-11 Score=106.00 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=81.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHhHHHhCC----CCceEEEEecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPWVVSNVLIPNLEWTGF----LDVSSIHTVRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga-~~V~aVDin~~al~~~ar~N~~~~gl----~~~v~ii~gD~~~~l~~~~~~~~ 227 (317)
.++.+|||+|||+|.++..++.. |. .+|+++|+++.++ +.+++|++.+++ .++++++.+|+.....
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~------- 147 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELV-DDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA------- 147 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHH-HHHHHHHHhhcccccCCCcEEEEECCcccCcc-------
Confidence 36789999999999999987765 43 4899999999999 999999998764 3469999999874321
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
..++||+|+++.++.. +++.+. +.|+|||++++.....
T Consensus 148 ~~~~fD~i~~~~~~~~-----~~~~~~--~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 148 EEAPYDAIHVGAAAPV-----VPQALI--DQLKPGGRLILPVGPA 185 (226)
T ss_dssp GGCCEEEEEECSBBSS-----CCHHHH--HTEEEEEEEEEEESCT
T ss_pred cCCCcCEEEECCchHH-----HHHHHH--HhcCCCcEEEEEEecC
Confidence 1367999999987642 223333 3799999999988754
No 166
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.29 E-value=6.3e-12 Score=116.92 Aligned_cols=92 Identities=18% Similarity=0.168 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++..++..+. +|++||+|+.++ +.+++|++.++..++++++++
T Consensus 14 ~~i~~~i~~~~~~-------~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~-~~a~~~~~~~~~~~~v~~~~~ 84 (285)
T 1zq9_A 14 PLIINSIIDKAAL-------RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLV-AELHKRVQGTPVASKLQVLVG 84 (285)
T ss_dssp HHHHHHHHHHTCC-------CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHH-HHHHHHHTTSTTGGGEEEEES
T ss_pred HHHHHHHHHhcCC-------CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHH-HHHHHHHHhcCCCCceEEEEc
Confidence 4456666666543 3678999999999999999888865 799999999999 999999987776567999999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCC
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
|+.+.. .+.||+|++|+||..
T Consensus 85 D~~~~~---------~~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 85 DVLKTD---------LPFFDTCVANLPYQI 105 (285)
T ss_dssp CTTTSC---------CCCCSEEEEECCGGG
T ss_pred ceeccc---------chhhcEEEEecCccc
Confidence 987641 247999999999974
No 167
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.28 E-value=4.8e-11 Score=106.79 Aligned_cols=103 Identities=19% Similarity=0.237 Sum_probs=80.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.+++.++..|. +|+++|+++.++ +.|++|+...+. +++++++|+.+.. ..++||+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~~~~~--~v~~~~~d~~~~~--------~~~~fD~ 108 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEML-RVARRKAKERNL--KIEFLQGDVLEIA--------FKNEFDA 108 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CCEEEESCGGGCC--------CCSCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHH-HHHHHHHHhcCC--ceEEEECChhhcc--------cCCCccE
Confidence 568999999999999999888876 799999999999 999999988776 4899999987642 1357999
Q ss_pred EEECC---CCCC-ccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 235 MSVTP---PYTA-VDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 235 V~~dP---Py~~-~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|++.. ++.. ......++.+. ++|+|||+++++.+.
T Consensus 109 v~~~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 109 VTMFFSTIMYFDEEDLRKLFSKVA--EALKPGGVFITDFPC 147 (252)
T ss_dssp EEECSSGGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEEC
T ss_pred EEEcCCchhcCCHHHHHHHHHHHH--HHcCCCeEEEEeccc
Confidence 99742 2211 12344555554 589999999987653
No 168
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.28 E-value=5.9e-12 Score=117.02 Aligned_cols=108 Identities=8% Similarity=-0.058 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCcchHHHHHH--HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI--SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa--s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|.+++.++ .....+|+++|+++.++ +.|++|+..+++.++++++++|+.+.. . .++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~-~~~ 187 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEAL-DGATRLAAGHALAGQITLHRQDAWKLD-------T-REG 187 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHH-HHHHHHHTTSTTGGGEEEEECCGGGCC-------C-CSC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHH-HHHHHHHHhcCCCCceEEEECchhcCC-------c-cCC
Confidence 367899999999999998764 33345899999999999 999999999998888999999988742 1 278
Q ss_pred ccEEEECCCCCC-ccHHH---HHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 232 FDYMSVTPPYTA-VDYEV---LMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 232 fDlV~~dPPy~~-~~~~~---~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
||+|+++.++.. .+... +++.+. ++|+|||++++.....
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFW--QALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHH--HHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHH--HhcCCCeEEEEEecCC
Confidence 999999887643 23333 455554 5899999999987543
No 169
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.28 E-value=5.1e-12 Score=112.36 Aligned_cols=104 Identities=14% Similarity=-0.027 Sum_probs=82.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..|. +|+++|+++.++ +.|++++...+..++++++.+|+.++. ..++||+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~fD~ 135 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESAL-AKANETYGSSPKAEYFSFVKEDVFTWR--------PTELFDL 135 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHH-HHHHHHHTTSGGGGGEEEECCCTTTCC--------CSSCEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHH-HHHHHHhhccCCCcceEEEECchhcCC--------CCCCeeE
Confidence 456999999999999998877665 699999999999 999999987665567999999987642 2358999
Q ss_pred EEECCCCCC-c--cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYTA-V--DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~~-~--~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|++...+.. . .....++.+. ++|+|||++++...
T Consensus 136 v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 136 IFDYVFFCAIEPEMRPAWAKSMY--ELLKPDGELITLMY 172 (235)
T ss_dssp EEEESSTTTSCGGGHHHHHHHHH--HHEEEEEEEEEEEC
T ss_pred EEEChhhhcCCHHHHHHHHHHHH--HHCCCCcEEEEEEe
Confidence 998765432 2 4566677665 48999999987654
No 170
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.28 E-value=1.6e-11 Score=109.64 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=88.6
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
++..+.+...+...+... .++.+|||+|||+|.++..++..|+ +|+++|+++.++ +.++++ ++
T Consensus 22 ~~~~~~~~~~~~~~l~~~------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~---------~~ 84 (240)
T 3dli_A 22 RGSRELVKARLRRYIPYF------KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMI-KFCEGK---------FN 84 (240)
T ss_dssp TCCHHHHHHHHGGGGGGT------TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHH-HHHHTT---------SE
T ss_pred CCCHHHHHHHHHHHHhhh------cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHH-HHHHhh---------cc
Confidence 455555555554444331 3578999999999999998888876 599999999998 888876 56
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-Cc--cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-AV--DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-~~--~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
++.+|+.+++..+ .+++||+|++.-... .. .+...++.+. ++|+|||++++......
T Consensus 85 ~~~~d~~~~~~~~-----~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 85 VVKSDAIEYLKSL-----PDKYLDGVMISHFVEHLDPERLFELLSLCY--SKMKYSSYIVIESPNPT 144 (240)
T ss_dssp EECSCHHHHHHTS-----CTTCBSEEEEESCGGGSCGGGHHHHHHHHH--HHBCTTCCEEEEEECTT
T ss_pred eeeccHHHHhhhc-----CCCCeeEEEECCchhhCCcHHHHHHHHHHH--HHcCCCcEEEEEeCCcc
Confidence 8889998875322 357899999864432 22 4466777765 48999999999876544
No 171
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.28 E-value=1.9e-11 Score=113.64 Aligned_cols=107 Identities=15% Similarity=0.213 Sum_probs=84.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhC--C-CCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTG--F-LDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~g--l-~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.+.+|||+|||+|.++.++++.. ..+|++||+|+.++ +.|++|+..++ + .++++++.+|+.+++... .+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~ 150 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVI-EVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TN 150 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHH-HHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CS
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHH-HHHHHHhHHhccccCCCcEEEEECChHHHHHhC------CC
Confidence 56899999999999999988763 56899999999999 99999986542 2 357999999999887542 46
Q ss_pred CccEEEECCCCCCcc----H-HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 231 PFDYMSVTPPYTAVD----Y-EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~----~-~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+||+|++|++..... + .+.++.+. +.|+|||++++...
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~--~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIY--NALKPNGYCVAQCE 193 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHH--HHEEEEEEEEEECC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHH--HhcCCCcEEEEECC
Confidence 899999998643221 1 46666665 48999999999865
No 172
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.27 E-value=1.6e-11 Score=115.26 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=81.9
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHh---CCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT---GFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~---gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.+.+|||+|||+|.++.++++. +..+|++||+|+.++ +.|++|+... ....+++++.+|+.+++... ..+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~~ 168 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVM-EQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PDN 168 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHH-HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CTT
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cCC
Confidence 5689999999999999998876 356899999999999 9999987431 12356999999999876421 146
Q ss_pred CccEEEECCCCCCccH-----HHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 231 PFDYMSVTPPYTAVDY-----EVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~-----~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+||+|++|++...... .+.++.+. ++|+|||++++....
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~--~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVL--RILKPDGICCNQGES 212 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHH--HHEEEEEEEEEEECC
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHH--HhcCCCcEEEEecCC
Confidence 8999999987543211 45566554 489999999998654
No 173
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.27 E-value=2e-11 Score=107.89 Aligned_cols=115 Identities=16% Similarity=0.116 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH
Q 021116 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV 215 (317)
Q Consensus 136 v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~ 215 (317)
..+.+.+.+... .++.+|||+|||+|.++..++..+. +|+++|+++.++ +.|+++... +++++++|+
T Consensus 29 ~~~~~~~~l~~~------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~-----~v~~~~~d~ 95 (250)
T 2p7i_A 29 MHPFMVRAFTPF------FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAI-SHAQGRLKD-----GITYIHSRF 95 (250)
T ss_dssp HHHHHHHHHGGG------CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHH-HHHHHHSCS-----CEEEEESCG
T ss_pred HHHHHHHHHHhh------cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHH-HHHHHhhhC-----CeEEEEccH
Confidence 344455555542 3578999999999999998888776 699999999999 999887643 489999998
Q ss_pred HHHHHHHhhhcCCCCCccEEEECCCC-CCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 216 ETFLERAEQFVGKDGPFDYMSVTPPY-TAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 216 ~~~l~~~~~~~~~~~~fDlV~~dPPy-~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
.+.. .+++||+|++.--. +..+....++.+.. ++|+|||++++..+..
T Consensus 96 ~~~~--------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~-~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 96 EDAQ--------LPRRYDNIVLTHVLEHIDDPVALLKRIND-DWLAEGGRLFLVCPNA 144 (250)
T ss_dssp GGCC--------CSSCEEEEEEESCGGGCSSHHHHHHHHHH-TTEEEEEEEEEEEECT
T ss_pred HHcC--------cCCcccEEEEhhHHHhhcCHHHHHHHHHH-HhcCCCCEEEEEcCCh
Confidence 7752 24789999986432 22345666666640 5999999999987543
No 174
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.27 E-value=8.5e-12 Score=111.51 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=81.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..+++.+..+|+++|+++.++ +.|++|+...+. .+++++.+|+.++. ...++||+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~-~~~~~~~~d~~~~~-------~~~~~fD~ 149 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFL-VQAKTYLGEEGK-RVRNYFCCGLQDFT-------PEPDSYDV 149 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHH-HHHHHHTGGGGG-GEEEEEECCGGGCC-------CCSSCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHHhhhcCC-ceEEEEEcChhhcC-------CCCCCEEE
Confidence 5789999999999999988877766899999999999 999999887653 45889999987642 23457999
Q ss_pred EEECCCCCC-cc--HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYTA-VD--YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~~-~~--~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+++-.... .+ +...++.+. ++|+|||++++...
T Consensus 150 v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 150 IWIQWVIGHLTDQHLAEFLRRCK--GSLRPNGIIVIKDN 186 (241)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHH--HhcCCCeEEEEEEc
Confidence 999754321 12 345566554 58999999998654
No 175
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.27 E-value=3.6e-12 Score=123.00 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=85.2
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCC
Q 021116 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (317)
Q Consensus 129 ~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~ 206 (317)
...|...+.+.+.+.+.. .++.+|||+|||+|.+++.++.+ ...+++++|+++.++ +.| +
T Consensus 20 ~~~TP~~l~~~~~~~~~~-------~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~-~~a----------~ 81 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEA-------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL-DLP----------P 81 (421)
T ss_dssp -CCCCHHHHHHHHHHCCC-------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC-CCC----------T
T ss_pred eEeCCHHHHHHHHHhhcc-------CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH-HhC----------C
Confidence 345667788888777643 24679999999999999988864 346899999999998 776 3
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccH---------H---------------------HHHHHHHHc
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDY---------E---------------------VLMAQISKS 256 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~---------~---------------------~~l~~L~~~ 256 (317)
+++++++|+.++. ..+.||+|++||||..... + ..++.+ .
T Consensus 82 ~~~~~~~D~~~~~--------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~--~ 151 (421)
T 2ih2_A 82 WAEGILADFLLWE--------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKA--V 151 (421)
T ss_dssp TEEEEESCGGGCC--------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHH--H
T ss_pred CCcEEeCChhhcC--------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHH--H
Confidence 4889999987652 2368999999999964211 1 122222 3
Q ss_pred CCcCCCeEEEEEeCC
Q 021116 257 ALVGKDSFIVVEYPL 271 (317)
Q Consensus 257 ~lLkpgG~ivv~~~~ 271 (317)
++|++||++++..+.
T Consensus 152 ~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 152 RLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHEEEEEEEEEEEEG
T ss_pred HHhCCCCEEEEEECh
Confidence 589999999888764
No 176
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.26 E-value=1.9e-11 Score=107.43 Aligned_cols=105 Identities=13% Similarity=0.243 Sum_probs=82.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCC----CceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL----DVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~----~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
++.+|||+|||+|.+++.++..|. +|+++|+++.++ +.+++|++..++. ++++++.+|+.+. +...+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~ 100 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAI-RLAETAARSPGLNQKTGGKAEFKVENASSL-------SFHDS 100 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHTTCCSCCSSSSCEEEEEECCTTSC-------CSCTT
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHH-HHHHHHHHhcCCccccCcceEEEEeccccc-------CCCCC
Confidence 578999999999999999888876 799999999999 9999999887763 3589999998753 12357
Q ss_pred CccEEEECCCCCC-ccHH---HHHHHHHHcCCcCCCeEEEEEeC
Q 021116 231 PFDYMSVTPPYTA-VDYE---VLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~-~~~~---~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+||+|+++..+.. .+.+ ..++.+. ++|+|||++++...
T Consensus 101 ~~D~v~~~~~l~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 101 SFDFAVMQAFLTSVPDPKERSRIIKEVF--RVLKPGAYLYLVEF 142 (235)
T ss_dssp CEEEEEEESCGGGCCCHHHHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred ceeEEEEcchhhcCCCHHHHHHHHHHHH--HHcCCCeEEEEEEC
Confidence 8999999765432 2334 5566554 58999999988754
No 177
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.26 E-value=2.6e-11 Score=110.12 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.++..++..+ ..+|+++|+++.++ +.+++|+..+++. +++++.+|+.+.. ...++|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~~~~~~~-~~~~~~~d~~~~~-------~~~~~f 106 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESL-EKARENTEKNGIK-NVKFLQANIFSLP-------FEDSSF 106 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEECCGGGCC-------SCTTCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCC-CcEEEEcccccCC-------CCCCCe
Confidence 367899999999999999888774 45899999999999 9999999999886 4999999987642 235789
Q ss_pred cEEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 233 DYMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 233 DlV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+|+++..+. ..+....++.+. ++|+|||++++..
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLK--KVLKPGGTITVIE 142 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred eEEEEechhhhcCCHHHHHHHHH--HHcCCCcEEEEEE
Confidence 9999976542 235567777775 4899999999875
No 178
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.26 E-value=4.2e-11 Score=113.16 Aligned_cols=83 Identities=8% Similarity=0.106 Sum_probs=68.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|..++.++.. +..+|+++|+++.++ +.+++|++.+|+. +++++++|+.++..... ....
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l-~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~----~~~~ 174 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRL-ASMATLLARAGVS-CCELAEEDFLAVSPSDP----RYHE 174 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCC-SEEEEECCGGGSCTTCG----GGTT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCC-eEEEEeCChHhcCcccc----ccCC
Confidence 46889999999999999987763 446899999999999 9999999999985 49999999876532100 0147
Q ss_pred ccEEEECCCCC
Q 021116 232 FDYMSVTPPYT 242 (317)
Q Consensus 232 fDlV~~dPPy~ 242 (317)
||.|++|||+.
T Consensus 175 fD~Vl~D~PcS 185 (309)
T 2b9e_A 175 VHYILLDPSCS 185 (309)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEEcCCcC
Confidence 99999999984
No 179
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.25 E-value=1.4e-11 Score=110.15 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=80.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+..+|+++|+++.++ +.+++++... ++++++++|+.+.. ...++||
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~~---~~~~~~~~d~~~~~-------~~~~~fD 160 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHML-EEAKRELAGM---PVGKFILASMETAT-------LPPNTYD 160 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHH-HHHHHHTTTS---SEEEEEESCGGGCC-------CCSSCEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHH-HHHHHHhccC---CceEEEEccHHHCC-------CCCCCeE
Confidence 35789999999999999988877766899999999999 9999987654 45899999987641 2346899
Q ss_pred EEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++......- .....++.+. ++|+|||++++..+
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQ--QALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHH--HhcCCCeEEEEEec
Confidence 99987543221 2345555554 58999999998875
No 180
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.25 E-value=3.4e-11 Score=101.51 Aligned_cols=120 Identities=9% Similarity=0.095 Sum_probs=88.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+. +|+++|+++.++ +.++++ .++++++.+| .. ...++||
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~------~~~v~~~~~d-~~---------~~~~~~D 77 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIAL-KEVKEK------FDSVITLSDP-KE---------IPDNSVD 77 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHH-HHHHHH------CTTSEEESSG-GG---------SCTTCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHH-HHHHHh------CCCcEEEeCC-CC---------CCCCceE
Confidence 3577999999999999998888775 899999999998 999888 2358899998 22 1357899
Q ss_pred EEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC---------------ccccCCCeEEEEEeecCce
Q 021116 234 YMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPLRTD---------------MLDTCGCLVKIKDRRFGRT 293 (317)
Q Consensus 234 lV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~---------------l~~~~~~~~~~~~r~yG~~ 293 (317)
+|++...+. ..+....++.+. ++|+|||++++....... +.....||.+++...++..
T Consensus 78 ~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gf~~~~~~~~~~~ 151 (170)
T 3i9f_A 78 FILFANSFHDMDDKQHVISEVK--RILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFSNFVVEKRFNPTPY 151 (170)
T ss_dssp EEEEESCSTTCSCHHHHHHHHH--HHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTTTEEEEEEECSSTT
T ss_pred EEEEccchhcccCHHHHHHHHH--HhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHhCcEEEEccCCCCc
Confidence 999876543 345667777765 489999999987543321 1111128888777666643
No 181
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.25 E-value=3.3e-11 Score=106.78 Aligned_cols=103 Identities=14% Similarity=0.045 Sum_probs=81.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..|..+|+++|+++.++ +.++++... ++++++.+|+.+.. ...++||
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-~~a~~~~~~----~~~~~~~~d~~~~~-------~~~~~fD 109 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKML-ARARAAGPD----TGITYERADLDKLH-------LPQDSFD 109 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTSCS----SSEEEEECCGGGCC-------CCTTCEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHH-HHHHHhccc----CCceEEEcChhhcc-------CCCCCce
Confidence 36789999999999999988888766899999999999 999988653 35889999987642 2346899
Q ss_pred EEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++...+. ..+....++.+. ++|+|||++++...
T Consensus 110 ~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 110 LAYSSLALHYVEDVARLFRTVH--QALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEEeccccccchHHHHHHHHH--HhcCcCcEEEEEeC
Confidence 999876542 235566777765 48999999998764
No 182
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=4.2e-11 Score=103.75 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=80.0
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEE
Q 021116 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYM 235 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV 235 (317)
+.+|||+|||+|.++..++..|. +|+++|+++.++ +.++++. .+++++++|+.++. ..+++||+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~------~~~~~~~~d~~~~~-------~~~~~fD~v 106 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLV-ELARQTH------PSVTFHHGTITDLS-------DSPKRWAGL 106 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHH-HHHHHHC------TTSEEECCCGGGGG-------GSCCCEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHH-HHHHHhC------CCCeEEeCcccccc-------cCCCCeEEE
Confidence 67999999999999998888876 699999999999 9998872 24889999987742 235789999
Q ss_pred EECCCCCC---ccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 236 SVTPPYTA---VDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 236 ~~dPPy~~---~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
++...+.. .+....++.+. ++|+|||++++......
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 107 LAWYSLIHMGPGELPDALVALR--MAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp EEESSSTTCCTTTHHHHHHHHH--HTEEEEEEEEEEEECCS
T ss_pred EehhhHhcCCHHHHHHHHHHHH--HHcCCCcEEEEEEccCC
Confidence 99654332 25667777775 48999999998875443
No 183
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.25 E-value=1.2e-11 Score=125.10 Aligned_cols=125 Identities=14% Similarity=0.017 Sum_probs=91.9
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc----C---------------CCEEEEEeCCHHH
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR----G---------------CSEVHFVEMDPWV 190 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~----G---------------a~~V~aVDin~~a 190 (317)
..|...+.+.+.+++.. ..+.+|+|+|||||.+.+.++.. + ...++|+|+|+.+
T Consensus 151 fyTP~~iv~~mv~~l~p-------~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~ 223 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKP-------QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT 223 (541)
T ss_dssp CCCCHHHHHHHHHHHCC-------CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHH
T ss_pred eeCCHHHHHHHHHHhcc-------CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHH
Confidence 45666677778777754 35789999999999999987642 1 1269999999999
Q ss_pred HHHHHHHhHHHhCCCC----ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---------------HHHHHH
Q 021116 191 VSNVLIPNLEWTGFLD----VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---------------YEVLMA 251 (317)
Q Consensus 191 l~~~ar~N~~~~gl~~----~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---------------~~~~l~ 251 (317)
+ ++|+.|+...|+.+ +..++++|....... ..+.||+|++||||.... ....+.
T Consensus 224 ~-~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~ 296 (541)
T 2ar0_A 224 R-RLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGE------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQ 296 (541)
T ss_dssp H-HHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHH------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHH
T ss_pred H-HHHHHHHHHhCCCccccccCCeEeCCCcccccc------cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHH
Confidence 8 99999999888864 267899997654321 136899999999997421 112333
Q ss_pred HHHHcCCcCCCeEEEEEeC
Q 021116 252 QISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 252 ~L~~~~lLkpgG~ivv~~~ 270 (317)
.+. ++|++||++.+..+
T Consensus 297 ~~l--~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 297 HII--ETLHPGGRAAVVVP 313 (541)
T ss_dssp HHH--HHEEEEEEEEEEEE
T ss_pred HHH--HHhCCCCEEEEEec
Confidence 333 47999999887765
No 184
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.24 E-value=3.5e-11 Score=104.34 Aligned_cols=106 Identities=10% Similarity=0.063 Sum_probs=78.9
Q ss_pred CCCCeEEEECCCcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.+++.++ ..|. +|+++|+++.++ +.++++++..+. +++++++|+.+. +...++|
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~-~~a~~~~~~~~~--~~~~~~~d~~~~-------~~~~~~f 90 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQL-KKAENFSRENNF--KLNISKGDIRKL-------PFKDESM 90 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHH-HHHHHHHHHHTC--CCCEEECCTTSC-------CSCTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHH-HHHHHHHHhcCC--ceEEEECchhhC-------CCCCCce
Confidence 357899999999999865544 4454 799999999999 999999987763 478999998753 1234689
Q ss_pred cEEEECCCC-CC--ccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 233 DYMSVTPPY-TA--VDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 233 DlV~~dPPy-~~--~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|+|++.... +. .+....++.+. ++|+|||++++.....
T Consensus 91 D~v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 91 SFVYSYGTIFHMRKNDVKEAIDEIK--RVLKPGGLACINFLTT 131 (209)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEEET
T ss_pred eEEEEcChHHhCCHHHHHHHHHHHH--HHcCCCcEEEEEEecc
Confidence 999986443 22 23445555554 5899999999887543
No 185
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=3.1e-11 Score=114.72 Aligned_cols=106 Identities=11% Similarity=-0.027 Sum_probs=82.4
Q ss_pred CeEEEECCCcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEE
Q 021116 157 GRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYM 235 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV 235 (317)
.+|||+|||+|.++.++++ ....+|++||+|+.++ +.|++|+.... .++++++.+|+.+++... ..++||+|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi-~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~-----~~~~fDvI 163 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELA-RLSREWFDIPR-APRVKIRVDDARMVAESF-----TPASRDVI 163 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHH-HHHHHHSCCCC-TTTEEEEESCHHHHHHTC-----CTTCEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHH-HHHHHhccccC-CCceEEEECcHHHHHhhc-----cCCCCCEE
Confidence 4999999999999999887 3334899999999999 99999986543 357999999999987542 24689999
Q ss_pred EECCCCCCc---c--HHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 236 SVTPPYTAV---D--YEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 236 ~~dPPy~~~---~--~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|+|.+.... . ..+.++.+. ++|+|||++++....
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~--r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCH--RGLAPGGLYVANCGD 202 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHH--HHEEEEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHH--HhcCCCcEEEEEecC
Confidence 998643221 1 155666665 489999999988763
No 186
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.24 E-value=1.6e-11 Score=113.57 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=72.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.+++.++.+|+ +|++||+|+.++ +.|++|++.+.+ +..+...+.. .... ..++||
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml-~~Ar~~~~~~~v--~~~~~~~~~~-~~~~------~~~~fD 112 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMC-DDLAEALADRCV--TIDLLDITAE-IPKE------LAGHFD 112 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHTSSSCC--EEEECCTTSC-CCGG------GTTCCS
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHH-HHHHHHHHhccc--eeeeeecccc-cccc------cCCCcc
Confidence 4678999999999999999998876 799999999999 999999865421 1222222210 0000 136899
Q ss_pred EEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 234 YMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 234 lV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|+++..++.. .....+..+. ++| |||++++++..
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~--~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGML--SLV-GSGTVRASVKL 150 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHH-TTSEEEEEEEB
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHH--HhC-cCcEEEEEecc
Confidence 99999765322 2334455554 478 99999998764
No 187
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.23 E-value=5.1e-11 Score=107.78 Aligned_cols=109 Identities=13% Similarity=0.032 Sum_probs=80.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHH------hCCCCceEEEEecHHHHHHHHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEW------TGFLDVSSIHTVRVETFLERAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~------~gl~~~v~ii~gD~~~~l~~~~~~~~ 227 (317)
++.+|||+|||+|.+++.++... ...|+|||+++.++ +.|++|++. .++. +++++++|+.+.+... .
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l-~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~~l~~~----~ 119 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVS-DYVQDRIRALRAAPAGGFQ-NIACLRSNAMKHLPNF----F 119 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHH-HHHHHHHHHHHHSTTCCCT-TEEEEECCTTTCHHHH----C
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHH-HHHHHHHHHHHHHHhcCCC-eEEEEECcHHHhhhhh----C
Confidence 46789999999999999887763 45799999999999 999998865 3454 5999999998744321 1
Q ss_pred CCCCccEEEECCC--CCCc-------cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 228 KDGPFDYMSVTPP--YTAV-------DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 228 ~~~~fDlV~~dPP--y~~~-------~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
..++||.|+++-| +.+. ....+++.+. ++|+|||++++....
T Consensus 120 ~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~--~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 120 YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYA--YVLRVGGLVYTITDV 170 (235)
T ss_dssp CTTCEEEEEEESCC-----------CCCHHHHHHHH--HHEEEEEEEEEEESC
T ss_pred CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHH--HHCCCCCEEEEEeCC
Confidence 3578999987532 2211 1245666665 489999999998764
No 188
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.22 E-value=3.9e-11 Score=112.39 Aligned_cols=91 Identities=12% Similarity=0.181 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++..++.++ .+|++||+|+.++ +.+++|++.+++ ++++++++
T Consensus 28 ~~i~~~i~~~~~~-------~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~-~~a~~~~~~~~~-~~v~~~~~ 97 (299)
T 2h1r_A 28 PGILDKIIYAAKI-------KSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMI-SEVKKRCLYEGY-NNLEVYEG 97 (299)
T ss_dssp HHHHHHHHHHHCC-------CTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHH-HHHHHHHHHTTC-CCEEC---
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHH-HHHHHHHHHcCC-CceEEEEC
Confidence 4456666666643 357899999999999999888775 4799999999999 999999988887 45999999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCC
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
|+.++. .++||+|++|+||..
T Consensus 98 D~~~~~---------~~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 98 DAIKTV---------FPKFDVCTANIPYKI 118 (299)
T ss_dssp -CCSSC---------CCCCSEEEEECCGGG
T ss_pred chhhCC---------cccCCEEEEcCCccc
Confidence 987642 257999999999974
No 189
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.22 E-value=2e-11 Score=112.85 Aligned_cols=120 Identities=15% Similarity=0.158 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCC--CceEEE
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL--DVSSIH 211 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~--~~v~ii 211 (317)
....+.+.+.+.. .+.+|||+|||+|.++..++..|. +|+++|+++.++ +.|++++...++. ++++++
T Consensus 69 ~~~~~~~~~~~~~--------~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~v~~~ 138 (299)
T 3g2m_A 69 TSEAREFATRTGP--------VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVL-AAFRKRLAEAPADVRDRCTLV 138 (299)
T ss_dssp HHHHHHHHHHHCC--------CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHH-HHHHHHHHTSCHHHHTTEEEE
T ss_pred cHHHHHHHHhhCC--------CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHH-HHHHHHHhhcccccccceEEE
Confidence 4445555555532 345999999999999999888875 699999999999 9999999877642 469999
Q ss_pred EecHHHHHHHHhhhcCCCCCccEEEEC-CCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 212 TVRVETFLERAEQFVGKDGPFDYMSVT-PPYTAV---DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 212 ~gD~~~~l~~~~~~~~~~~~fDlV~~d-PPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
++|+.++. ..++||+|++. ..+... .....++.+. ++|+|||++++......
T Consensus 139 ~~d~~~~~--------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 139 QGDMSAFA--------LDKRFGTVVISSGSINELDEADRRGLYASVR--EHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ECBTTBCC--------CSCCEEEEEECHHHHTTSCHHHHHHHHHHHH--HHEEEEEEEEEEEECCH
T ss_pred eCchhcCC--------cCCCcCEEEECCcccccCCHHHHHHHHHHHH--HHcCCCcEEEEEeecCc
Confidence 99987642 14789999864 212221 2355566554 58999999999876554
No 190
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.22 E-value=3.8e-11 Score=108.46 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=75.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..|. +|+++|+++.++ +.|++++. +++++++|+.++. ..++||+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~~------~~~~~~~d~~~~~--------~~~~fD~ 113 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADML-AIARRRNP------DAVLHHGDMRDFS--------LGRRFSA 113 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHH-HHHHHHCT------TSEEEECCTTTCC--------CSCCEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHH-HHHHhhCC------CCEEEECChHHCC--------ccCCcCE
Confidence 468999999999999998888875 799999999999 99998753 4789999987642 1478999
Q ss_pred EEECC-CCCCc----cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 235 MSVTP-PYTAV----DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 235 V~~dP-Py~~~----~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|++.. .+..- .....++.+. ++|+|||+++++.
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~--~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFA--AHVLPDGVVVVEP 151 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHH--HTEEEEEEEEECC
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHH--HhcCCCcEEEEEe
Confidence 99975 43321 2334455554 5899999999974
No 191
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.22 E-value=4.5e-11 Score=104.67 Aligned_cols=99 Identities=22% Similarity=0.156 Sum_probs=77.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..+. +|+++|+++.++ +.+++++. ++++++.+|+.++. .. ++||+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~-----~~~~~~~~d~~~~~-------~~-~~fD~ 109 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMR-MIAKEKLP-----KEFSITEGDFLSFE-------VP-TSIDT 109 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHSC-----TTCCEESCCSSSCC-------CC-SCCSE
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHH-HHHHHhCC-----CceEEEeCChhhcC-------CC-CCeEE
Confidence 578999999999999999888865 799999999999 99998865 34788999987642 22 78999
Q ss_pred EEECCCCCC-ccHHH--HHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYTA-VDYEV--LMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~~-~~~~~--~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+++..+.. .+... .++.+. ++|+|||++++...
T Consensus 110 v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 110 IVSTYAFHHLTDDEKNVAIAKYS--QLLNKGGKIVFADT 146 (220)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHH--HHSCTTCEEEEEEE
T ss_pred EEECcchhcCChHHHHHHHHHHH--HhcCCCCEEEEEec
Confidence 999765432 22222 565554 58999999999854
No 192
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.21 E-value=5.3e-11 Score=105.44 Aligned_cols=103 Identities=13% Similarity=0.115 Sum_probs=79.1
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++.. .+|+++|+++.++ +.|++|+..++ .+++++.+|+.+.. ..++||+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~-~~a~~~~~~~~--~~~~~~~~d~~~~~--------~~~~fD~ 99 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEML-EIAQEKAMETN--RHVDFWVQDMRELE--------LPEPVDA 99 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHH-HHHHHHHHHTT--CCCEEEECCGGGCC--------CSSCEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHH-HHHHHhhhhcC--CceEEEEcChhhcC--------CCCCcCE
Confidence 4689999999999999988776 5899999999999 99999998776 34899999987642 1368999
Q ss_pred EEECC-CCC-C---ccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 235 MSVTP-PYT-A---VDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 235 V~~dP-Py~-~---~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|++.. ... . ......++.+. ++|+|||+++++....
T Consensus 100 v~~~~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 100 ITILCDSLNYLQTEADVKQTFDSAA--RLLTDGGKLLFDVHSP 140 (243)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHH--HHEEEEEEEEEEEECH
T ss_pred EEEeCCchhhcCCHHHHHHHHHHHH--HhcCCCeEEEEEcCCH
Confidence 99864 222 1 12344455544 5899999999976543
No 193
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.21 E-value=5.7e-11 Score=103.31 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=78.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..|. +|+++|+++.++ +.+++ .+. .+++++++|+.++. ..++||
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~-~~a~~----~~~-~~~~~~~~d~~~~~--------~~~~~D 109 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMI-AEAGR----HGL-DNVEFRQQDLFDWT--------PDRQWD 109 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHH-HHHGG----GCC-TTEEEEECCTTSCC--------CSSCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHH-HHHHh----cCC-CCeEEEecccccCC--------CCCcee
Confidence 3567999999999999998888865 799999999998 88876 454 35999999987651 357899
Q ss_pred EEEECCCCCCc-c--HHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVTPPYTAV-D--YEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~dPPy~~~-~--~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+|+++-..... . ....++.+. ++|+|||++++.....
T Consensus 110 ~v~~~~~l~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 110 AVFFAHWLAHVPDDRFEAFWESVR--SAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEECC
T ss_pred EEEEechhhcCCHHHHHHHHHHHH--HHcCCCeEEEEEeCCC
Confidence 99997543221 2 255566554 5899999998876543
No 194
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.21 E-value=1.3e-10 Score=103.26 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=79.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC------CEEEEEeCCHHHHHHHHHHhHHHhCC----CCceEEEEecHHHHHHHH
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC------SEVHFVEMDPWVVSNVLIPNLEWTGF----LDVSSIHTVRVETFLERA 222 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga------~~V~aVDin~~al~~~ar~N~~~~gl----~~~v~ii~gD~~~~l~~~ 222 (317)
.++.+|||+|||+|.++..++.. +. .+|+++|+++.++ +.|++|++.++. .++++++.+|+.+.+.
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~-~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 159 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELV-RRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP-- 159 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHH-HHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG--
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHH-HHHHHHHHhcCccccCCCceEEEECCcccCCC--
Confidence 35789999999999999987763 32 4899999999999 999999988761 2358999999876321
Q ss_pred hhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 223 EQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 223 ~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
...+||+|+++.+... . .+.+. +.|+|||++++.....
T Consensus 160 -----~~~~fD~I~~~~~~~~-~----~~~~~--~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 160 -----PNAPYNAIHVGAAAPD-T----PTELI--NQLASGGRLIVPVGPD 197 (227)
T ss_dssp -----GGCSEEEEEECSCBSS-C----CHHHH--HTEEEEEEEEEEESCS
T ss_pred -----cCCCccEEEECCchHH-H----HHHHH--HHhcCCCEEEEEEecC
Confidence 1267999999987543 1 23333 3799999999988753
No 195
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.21 E-value=5.1e-11 Score=108.55 Aligned_cols=126 Identities=10% Similarity=0.007 Sum_probs=91.1
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCC
Q 021116 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLD 206 (317)
Q Consensus 129 ~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~ 206 (317)
..|..+.++.++.+-+.... ..+|.+|||+|||+|.++..++.. | ..+|+++|++++++ +.+++|++..+
T Consensus 55 w~p~rsklaa~i~~gl~~l~----ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~-~~l~~~a~~~~--- 126 (233)
T 4df3_A 55 WNAYRSKLAAALLKGLIELP----VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVM-RDLLTVVRDRR--- 126 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCC----CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHH-HHHHHHSTTCT---
T ss_pred ECCCchHHHHHHHhchhhcC----CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHhhHhhc---
Confidence 35666677766655443211 147899999999999999987764 4 35899999999999 99998876543
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++..+.+|+.+... .+...+.+|+||+|.++.. +.+..+..+. +.|||||++++..
T Consensus 127 ni~~V~~d~~~p~~----~~~~~~~vDvVf~d~~~~~-~~~~~l~~~~--r~LKpGG~lvI~i 182 (233)
T 4df3_A 127 NIFPILGDARFPEK----YRHLVEGVDGLYADVAQPE-QAAIVVRNAR--FFLRDGGYMLMAI 182 (233)
T ss_dssp TEEEEESCTTCGGG----GTTTCCCEEEEEECCCCTT-HHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred CeeEEEEeccCccc----cccccceEEEEEEeccCCh-hHHHHHHHHH--HhccCCCEEEEEE
Confidence 48888888765422 1223578999999987653 4445555543 4799999999864
No 196
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.21 E-value=5.6e-11 Score=103.75 Aligned_cols=99 Identities=14% Similarity=0.168 Sum_probs=77.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..|. +|+++|+++.++ +.+++++ + ++++.+|+.+.. ..++||+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~---~----~~~~~~d~~~~~--------~~~~fD~ 105 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELA-AEASRRL---G----RPVRTMLFHQLD--------AIDAYDA 105 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---T----SCCEECCGGGCC--------CCSCEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHH-HHHHHhc---C----CceEEeeeccCC--------CCCcEEE
Confidence 578999999999999999888876 799999999999 9999887 2 456788887642 3578999
Q ss_pred EEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 235 MSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 235 V~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|++...+... .....++.+. ++|+|||++++.....
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 106 VWAHACLLHVPRDELADVLKLIW--RALKPGGLFYASYKSG 144 (211)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEECC
T ss_pred EEecCchhhcCHHHHHHHHHHHH--HhcCCCcEEEEEEcCC
Confidence 9998654322 3445566554 5899999999986644
No 197
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.21 E-value=4.4e-11 Score=107.18 Aligned_cols=103 Identities=14% Similarity=0.161 Sum_probs=80.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+. +|+++|+++.++ +.+++|+ ..+ ..+++++.+|+.++ +..+++||
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~-~~~-~~~~~~~~~d~~~~-------~~~~~~fD 106 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAML-EVFRQKI-AGV-DRKVQVVQADARAI-------PLPDESVH 106 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHH-HHHHHHT-TTS-CTTEEEEESCTTSC-------CSCTTCEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHh-hcc-CCceEEEEcccccC-------CCCCCCee
Confidence 3578999999999999998888764 799999999999 9999988 323 34699999998653 12356899
Q ss_pred EEEECCCCCC-ccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYTA-VDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~~-~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|++.-.++. .+....++.+. ++|+|||++++..
T Consensus 107 ~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 107 GVIVVHLWHLVPDWPKVLAEAI--RVLKPGGALLEGW 141 (263)
T ss_dssp EEEEESCGGGCTTHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred EEEECCchhhcCCHHHHHHHHH--HHCCCCcEEEEEe
Confidence 9999755432 25566777665 4899999998873
No 198
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.20 E-value=4.1e-11 Score=109.68 Aligned_cols=103 Identities=17% Similarity=0.058 Sum_probs=76.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHH----------hC------CCCceEEEEecHHHH
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW----------TG------FLDVSSIHTVRVETF 218 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~----------~g------l~~~v~ii~gD~~~~ 218 (317)
++.+|||+|||+|..+..+++.|. +|++||+++.++ +.|+++... .+ ...+++++++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGI-REFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHH-HHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHH-HHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 578999999999999999999887 799999999999 999765431 00 124599999999875
Q ss_pred HHHHhhhcCCCCCccEEEECCCCCC---ccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 219 LERAEQFVGKDGPFDYMSVTPPYTA---VDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 219 l~~~~~~~~~~~~fDlV~~dPPy~~---~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
... ..++||+|+....+.. ......++.+. ++|+|||++++
T Consensus 146 ~~~------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~--~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRA------NIGKFDRIWDRGALVAINPGDHDRYADIIL--SLLRKEFQYLV 189 (252)
T ss_dssp GGG------CCCCEEEEEESSSTTTSCGGGHHHHHHHHH--HTEEEEEEEEE
T ss_pred Ccc------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHH--HHcCCCeEEEE
Confidence 311 1268999997654432 12345566665 58999999864
No 199
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.20 E-value=1.3e-10 Score=103.03 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=80.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..|+ +|+++|+++.++ +.++++.. ..+++++.+|+.+.. ..+++||+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~~~----~~~~~~~~~d~~~~~-------~~~~~fD~ 119 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMI-QKGKERGE----GPDLSFIKGDLSSLP-------FENEQFEA 119 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHTTTC----BTTEEEEECBTTBCS-------SCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHH-HHHHhhcc----cCCceEEEcchhcCC-------CCCCCccE
Confidence 578999999999999999888876 799999999999 99988752 245899999987642 23578999
Q ss_pred EEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|++...+. ..+....++.+. ++|+|||++++...
T Consensus 120 v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 120 IMAINSLEWTEEPLRALNEIK--RVLKSDGYACIAIL 154 (242)
T ss_dssp EEEESCTTSSSCHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEcChHhhccCHHHHHHHHH--HHhCCCeEEEEEEc
Confidence 99865443 345667777765 48999999998864
No 200
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.20 E-value=2.1e-11 Score=108.33 Aligned_cols=116 Identities=11% Similarity=0.083 Sum_probs=79.3
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 131 PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 131 pt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
|..+.+...++..+. ...+|||+|||+|.+++..+.. ++ +|+++|+|+.++ +.+++|++.+|..+++
T Consensus 34 p~ld~fY~~~~~~l~---------~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~l-eiar~~~~~~g~~~~v 102 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIK---------HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEI-AFLSSIIGKLKTTIKY 102 (200)
T ss_dssp GGHHHHHHHHHHHSC---------CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHH-HHHHHHHHHSCCSSEE
T ss_pred HhHHHHHHHHHhhcC---------CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHH-HHHHHHHHhcCCCccE
Confidence 344555555555552 4679999999999999987665 45 899999999999 9999999999998667
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC-ccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA-VDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~-~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++ .|..... ..++||+|++.--++. .+.+..+..+. ..|+|||+++..-
T Consensus 103 ~~--~d~~~~~--------~~~~~DvVLa~k~LHlL~~~~~al~~v~--~~L~pggvfISfp 152 (200)
T 3fzg_A 103 RF--LNKESDV--------YKGTYDVVFLLKMLPVLKQQDVNILDFL--QLFHTQNFVISFP 152 (200)
T ss_dssp EE--ECCHHHH--------TTSEEEEEEEETCHHHHHHTTCCHHHHH--HTCEEEEEEEEEE
T ss_pred EE--ecccccC--------CCCCcChhhHhhHHHhhhhhHHHHHHHH--HHhCCCCEEEEeC
Confidence 66 5654432 2477999998521110 00011112222 3789998877654
No 201
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.20 E-value=7.7e-11 Score=108.38 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=83.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||+|||+|.+++.++.. + ..+|+++|+++.++ +.|++++...+. +++++.+|+.++. ..++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~-~~a~~~~~~~~~--~v~~~~~d~~~~~--------~~~~ 89 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLL-AEARELFRLLPY--DSEFLEGDATEIE--------LNDK 89 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHH-HHHHHHHHSSSS--EEEEEESCTTTCC--------CSSC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEcchhhcC--------cCCC
Confidence 36789999999999999988775 2 35899999999999 999999887765 5999999988642 1368
Q ss_pred ccEEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 232 FDYMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 232 fDlV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
||+|+++.... ..+....++.+. ++|+|||++++..+.
T Consensus 90 fD~v~~~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 90 YDIAICHAFLLHMTTPETMLQKMI--HSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHH--HTEEEEEEEEEEECC
T ss_pred eeEEEECChhhcCCCHHHHHHHHH--HHcCCCCEEEEEecc
Confidence 99999976532 235667777765 489999999987654
No 202
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.19 E-value=2.1e-11 Score=108.34 Aligned_cols=109 Identities=13% Similarity=0.106 Sum_probs=79.5
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
+|.+..+...+...+. .++.+|||+|||+|.+++.++..|+ +|+++|+++.++ +.+++| . .+++
T Consensus 31 ~~~~~~l~~~~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~-~~a~~~-----~-~~~~ 94 (226)
T 3m33_A 31 GPDPELTFDLWLSRLL--------TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELL-KLARAN-----A-PHAD 94 (226)
T ss_dssp SSCTTHHHHHHHHHHC--------CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHH-HHHHHH-----C-TTSE
T ss_pred CCCHHHHHHHHHHhcC--------CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHH-HHHHHh-----C-CCce
Confidence 5665655555544332 3578999999999999999888865 799999999999 999988 1 3488
Q ss_pred EEEecHHHHHHHHhhhcCC-CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 210 IHTVRVETFLERAEQFVGK-DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~-~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
++++|+.+.+ +.. +++||+|++++. ....++.+. ++|+|||+++.
T Consensus 95 ~~~~d~~~~~------~~~~~~~fD~v~~~~~-----~~~~l~~~~--~~LkpgG~l~~ 140 (226)
T 3m33_A 95 VYEWNGKGEL------PAGLGAPFGLIVSRRG-----PTSVILRLP--ELAAPDAHFLY 140 (226)
T ss_dssp EEECCSCSSC------CTTCCCCEEEEEEESC-----CSGGGGGHH--HHEEEEEEEEE
T ss_pred EEEcchhhcc------CCcCCCCEEEEEeCCC-----HHHHHHHHH--HHcCCCcEEEE
Confidence 9999985432 223 468999999742 223344443 37999999993
No 203
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.19 E-value=1.6e-10 Score=117.10 Aligned_cols=133 Identities=14% Similarity=0.060 Sum_probs=95.0
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc----CCCEEEEEeCCHHHHHHHHHHhHHHhCC
Q 021116 129 VRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR----GCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (317)
Q Consensus 129 ~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~----Ga~~V~aVDin~~al~~~ar~N~~~~gl 204 (317)
-..|...+.+.+.+++..... ...+.+|+|+|||||.+.+.++.. +..+++|+|+|+.++ ++|+.|+...|+
T Consensus 198 ~fyTP~~Vv~lmv~ll~~~~~---~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~-~lA~~Nl~l~gi 273 (542)
T 3lkd_A 198 EFYTPQPVAKLMTQIAFLGRE---DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTY-NLARMNMILHGV 273 (542)
T ss_dssp SCCCCHHHHHHHHHHHHTTCT---TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHH-HHHHHHHHHTTC
T ss_pred eecccHHHHHHHHHHHhcccC---CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHH-HHHHHHHHHcCC
Confidence 355667788888888864210 135789999999999999988764 345799999999998 999999999998
Q ss_pred C-CceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc--------------HH----------HHHHHHHHcCCc
Q 021116 205 L-DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD--------------YE----------VLMAQISKSALV 259 (317)
Q Consensus 205 ~-~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~--------------~~----------~~l~~L~~~~lL 259 (317)
. +++.+.++|..... .. ......||+|++||||.... +. ..+..+. +.|
T Consensus 274 ~~~~~~I~~gDtL~~d--~p--~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l--~~L 347 (542)
T 3lkd_A 274 PIENQFLHNADTLDED--WP--TQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGY--YHL 347 (542)
T ss_dssp CGGGEEEEESCTTTSC--SC--CSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHH--HTB
T ss_pred CcCccceEecceeccc--cc--ccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHH--HHh
Confidence 5 45889999976430 00 01246799999999996321 10 1223222 489
Q ss_pred C-CCeEEEEEeCC
Q 021116 260 G-KDSFIVVEYPL 271 (317)
Q Consensus 260 k-pgG~ivv~~~~ 271 (317)
+ +||++.+..+.
T Consensus 348 k~~gGr~a~VlP~ 360 (542)
T 3lkd_A 348 KQDNGVMAIVLPH 360 (542)
T ss_dssp CTTTCEEEEEEET
T ss_pred CCCceeEEEEecc
Confidence 9 99998776653
No 204
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.19 E-value=5e-11 Score=105.88 Aligned_cols=105 Identities=11% Similarity=-0.042 Sum_probs=74.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.++..++... ..+|+++|+++.++ +.+.++++.. +++.++.+|+.+..... + ..++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l-~~~~~~a~~~---~~v~~~~~d~~~~~~~~---~-~~~~f 127 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPF-EKLLELVRER---NNIIPLLFDASKPWKYS---G-IVEKV 127 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHH-HHHHHHHHHC---SSEEEECSCTTCGGGTT---T-TCCCE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHhcC---CCeEEEEcCCCCchhhc---c-cccce
Confidence 367899999999999998877653 35899999999998 7777766543 34788888886531100 1 12689
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+|++|.+.. ......++.+. ++|+|||++++..
T Consensus 128 D~V~~~~~~~-~~~~~~l~~~~--r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDIAQK-NQIEILKANAE--FFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEECCCST-THHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred eEEEEeccCh-hHHHHHHHHHH--HHhCCCCEEEEEE
Confidence 9999995432 12233345544 5899999999874
No 205
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.19 E-value=7.7e-11 Score=106.80 Aligned_cols=109 Identities=12% Similarity=0.029 Sum_probs=80.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC-CEEEEEeCCHH------HHHHHHHHhHHHhCCCCceEEEEec-HHHHHHHHhh
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPW------VVSNVLIPNLEWTGFLDVSSIHTVR-VETFLERAEQ 224 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga-~~V~aVDin~~------al~~~ar~N~~~~gl~~~v~ii~gD-~~~~l~~~~~ 224 (317)
.++.+|||+|||+|.+++.++.. |. .+|+++|+++. ++ +.|++|++..++.++++++.+| .... .
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~ 115 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTL-GQAWNHLLAGPLGDRLTVHFNTNLSDD-----L 115 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCH-HHHHHHHHTSTTGGGEEEECSCCTTTC-----C
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHH-HHHHHHHHhcCCCCceEEEECChhhhc-----c
Confidence 46789999999999999988876 43 58999999997 88 9999999988887779999998 2211 0
Q ss_pred hcCCCCCccEEEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 225 FVGKDGPFDYMSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 225 ~~~~~~~fDlV~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++...++||+|+++.++. ..+...+++.+. .++++||++++...
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~--~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASANALALLFK--NMAAVCDHVDVAEW 160 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCHHHHHHHHH--HHTTTCSEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhhCCCHHHHHHHHH--HHhCCCCEEEEEEe
Confidence 112347899999987653 234444444443 35667999988653
No 206
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.18 E-value=1.9e-11 Score=107.43 Aligned_cols=105 Identities=12% Similarity=0.079 Sum_probs=75.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHH----HHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNV----LIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~----ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~ 228 (317)
.++.+|||+|||+|.+++.++..+ ..+|+++|+++.++ +. ++++.+..++. +++++++|+.+.. ..
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l-~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~-------~~ 96 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRM-EKISAKAAAKPAKGGLP-NLLYLWATAERLP-------PL 96 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGG-HHHHHHHTSCGGGTCCT-TEEEEECCSTTCC-------SC
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHhhhhcCCC-ceEEEecchhhCC-------CC
Confidence 367899999999999999988874 45899999999977 64 34455556664 5999999987631 22
Q ss_pred CCCccEEEECCCCCCc------cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 229 DGPFDYMSVTPPYTAV------DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~------~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+. |.|++..++... +....++.+. ++|+|||++++...
T Consensus 97 ~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 97 SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMA--AVCRPGASFLVALN 141 (218)
T ss_dssp CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHH--HTEEEEEEEEEEEE
T ss_pred CCC-CEEEEEccchhhhhhhhccHHHHHHHHH--HHcCCCcEEEEEec
Confidence 344 888877654321 1144555554 58999999999754
No 207
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.18 E-value=6.9e-11 Score=111.41 Aligned_cols=93 Identities=13% Similarity=0.051 Sum_probs=72.9
Q ss_pred HHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHH
Q 021116 138 GAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVE 216 (317)
Q Consensus 138 ~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~ 216 (317)
+.+.+.+.. .++.+|||+|||+|..+++++++. ..+|+++|+|+.++ +.|++|++.+| ++++++++|+.
T Consensus 16 ~e~l~~L~~-------~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al-~~A~~~~~~~g--~~v~~v~~d~~ 85 (301)
T 1m6y_A 16 REVIEFLKP-------EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVL-RIAEEKLKEFS--DRVSLFKVSYR 85 (301)
T ss_dssp HHHHHHHCC-------CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHTGGGT--TTEEEEECCGG
T ss_pred HHHHHhcCC-------CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhcC--CcEEEEECCHH
Confidence 344466643 357899999999999999988763 46899999999999 99999999887 56999999987
Q ss_pred HHHHHHhhhcCCCCCccEEEECCCCC
Q 021116 217 TFLERAEQFVGKDGPFDYMSVTPPYT 242 (317)
Q Consensus 217 ~~l~~~~~~~~~~~~fDlV~~dPPy~ 242 (317)
++...+..+ ...+||.|++|||+.
T Consensus 86 ~l~~~l~~~--g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 86 EADFLLKTL--GIEKVDGILMDLGVS 109 (301)
T ss_dssp GHHHHHHHT--TCSCEEEEEEECSCC
T ss_pred HHHHHHHhc--CCCCCCEEEEcCccc
Confidence 754322110 114799999999975
No 208
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.17 E-value=5.3e-11 Score=109.56 Aligned_cols=117 Identities=14% Similarity=0.166 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++..++.++ .+|++||+|+.++ +.+++|++. .++++++++
T Consensus 15 ~~i~~~iv~~~~~-------~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~-~~~~~~~~~---~~~v~~i~~ 82 (255)
T 3tqs_A 15 SFVLQKIVSAIHP-------QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLV-AFLQKKYNQ---QKNITIYQN 82 (255)
T ss_dssp HHHHHHHHHHHCC-------CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHH-HHHHHHHTT---CTTEEEEES
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHH-HHHHHHHhh---CCCcEEEEc
Confidence 4466667676654 367899999999999999988887 5899999999999 999999865 246999999
Q ss_pred cHHHHH-HHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 214 RVETFL-ERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 214 D~~~~l-~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|+.++. ... ...++|| |+.|+||.. -..++..+.+....-...++++..
T Consensus 83 D~~~~~~~~~----~~~~~~~-vv~NlPY~i--s~~il~~ll~~~~~~~~~~lm~Qk 132 (255)
T 3tqs_A 83 DALQFDFSSV----KTDKPLR-VVGNLPYNI--STPLLFHLFSQIHCIEDMHFMLQK 132 (255)
T ss_dssp CTTTCCGGGS----CCSSCEE-EEEECCHHH--HHHHHHHHHHTGGGEEEEEEEEEH
T ss_pred chHhCCHHHh----ccCCCeE-EEecCCccc--CHHHHHHHHhCCCChheEEEEEeH
Confidence 998752 111 0124688 999999953 223444333221122345555554
No 209
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.17 E-value=1.1e-10 Score=112.36 Aligned_cols=112 Identities=18% Similarity=0.058 Sum_probs=84.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHh-----C-CC-CceEEEEecHHHHHHHHhh
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWT-----G-FL-DVSSIHTVRVETFLERAEQ 224 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~-----g-l~-~~v~ii~gD~~~~l~~~~~ 224 (317)
.++.+|||+|||+|.+++.++.. ...+|+++|+++.++ +.|++|++.+ | +. .+++++++|+.+.... ..
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~-~~ 159 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQL-EVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA-EP 159 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHH-HHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC-BS
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc-cc
Confidence 36789999999999999987764 234899999999999 9999998876 4 32 4699999998764210 00
Q ss_pred hcCCCCCccEEEECCCCCC-ccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 225 FVGKDGPFDYMSVTPPYTA-VDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 225 ~~~~~~~fDlV~~dPPy~~-~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+..+++||+|+++..+.. .+....++.+. ++|+|||++++..
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~--r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIH--RVLRDGGELYFSD 203 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHH--HHcCCCCEEEEEE
Confidence 0223578999999876543 35667777765 4899999999874
No 210
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.17 E-value=7.1e-12 Score=114.38 Aligned_cols=111 Identities=12% Similarity=0.063 Sum_probs=76.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhC--C--------------------------C
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG--F--------------------------L 205 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~g--l--------------------------~ 205 (317)
.++.+|||+|||+|.+.+.++..|+.+|+++|+++.++ +.|+++++... + .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l-~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNR-EELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHH-HHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHH-HHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 46789999999999998877788877899999999999 99999876532 1 0
Q ss_pred CceE-EEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-----CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 206 DVSS-IHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-----AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 206 ~~v~-ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-----~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+++ ++++|+.+..... +...++||+|++.--.+ ..++...+..+. ++|+|||++++...
T Consensus 133 ~~i~~~~~~D~~~~~~~~---~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~--r~LKPGG~li~~~~ 198 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLA---PAVLPLADCVLTLLAMECACCSLDAYRAALCNLA--SLLKPGGHLVTTVT 198 (263)
T ss_dssp HHEEEEEECCTTSSSTTT---TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHH--TTEEEEEEEEEEEE
T ss_pred hhhheEEeccccCCCCCC---ccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHH--HHcCCCcEEEEEEe
Confidence 1233 7888876531100 01136899999962111 112334444443 79999999998853
No 211
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=1.4e-10 Score=98.53 Aligned_cols=102 Identities=18% Similarity=0.209 Sum_probs=78.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..+. +|+++|+++.++ +.+++|+. +++++++|+.+.. ...++||+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~-~~a~~~~~------~~~~~~~d~~~~~-------~~~~~~D~ 110 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILI-DYAKQDFP------EARWVVGDLSVDQ-------ISETDFDL 110 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHCT------TSEEEECCTTTSC-------CCCCCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHH-HHHHHhCC------CCcEEEcccccCC-------CCCCceeE
Confidence 578999999999999998888865 799999999998 99988763 3788999987631 23468999
Q ss_pred EEECCCCC-Cc---cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 235 MSVTPPYT-AV---DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 235 V~~dPPy~-~~---~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
|+++++.. .. .....++.+. ++|+|||++++......
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~--~~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIH--RALGADGRAVIGFGAGR 151 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEETTS
T ss_pred EEECCcHHhhcChHHHHHHHHHHH--HHhCCCCEEEEEeCCCC
Confidence 99996532 11 2345555554 48999999999876543
No 212
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.15 E-value=2.5e-10 Score=106.21 Aligned_cols=114 Identities=13% Similarity=0.077 Sum_probs=81.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhC------CCCceEEEEecHHHHHHHHhhhcCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTG------FLDVSSIHTVRVETFLERAEQFVGK 228 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~g------l~~~v~ii~gD~~~~l~~~~~~~~~ 228 (317)
++.+|||+|||+|.++..++..+..+|+++|+++.++ +.|+++....+ ...+++++++|+.+.... ..++..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSV-KQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI-DKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST-TTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHHHHHhhhcccccccceEEEEEecccccchh-hhcccC
Confidence 5789999999999999988877667899999999999 99999887652 224589999998764100 000111
Q ss_pred CCCccEEEECCCCCCc--c---HHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 229 DGPFDYMSVTPPYTAV--D---YEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~--~---~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
.++||+|++.-..+.. + ....++.+. ++|+|||++++.....
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~--~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNAC--ERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHH--TTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHH--HHhCCCcEEEEecCCh
Confidence 3489999987544321 2 234444443 7999999999987643
No 213
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=7e-11 Score=105.82 Aligned_cols=100 Identities=15% Similarity=0.157 Sum_probs=78.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||+|||+|.++..++.. ...+|+++|+++.++ +.++++. .+++++.+|+.++. .+++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~-~~a~~~~------~~~~~~~~d~~~~~--------~~~~f 96 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDML-EKAADRL------PNTNFGKADLATWK--------PAQKA 96 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHH-HHHHHHS------TTSEEEECCTTTCC--------CSSCE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHhC------CCcEEEECChhhcC--------ccCCc
Confidence 35789999999999999988776 134699999999999 9998871 34789999987642 24689
Q ss_pred cEEEECCCCCC-ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 233 DYMSVTPPYTA-VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 233 DlV~~dPPy~~-~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+|+++..+.. .+....++.+. ++|+|||++++...
T Consensus 97 D~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 97 DLLYANAVFQWVPDHLAVLSQLM--DQLESGGVLAVQMP 133 (259)
T ss_dssp EEEEEESCGGGSTTHHHHHHHHG--GGEEEEEEEEEEEE
T ss_pred CEEEEeCchhhCCCHHHHHHHHH--HhcCCCeEEEEEeC
Confidence 99999765432 35566677665 58999999998864
No 214
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=1.1e-10 Score=106.64 Aligned_cols=101 Identities=19% Similarity=0.149 Sum_probs=79.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+. +|+++|+++.++ +.++++. .+++++.+|+.++. ..++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~------~~~~~~~~d~~~~~--------~~~~fD 119 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMI-EKARQNY------PHLHFDVADARNFR--------VDKPLD 119 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHC------TTSCEEECCTTTCC--------CSSCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHH-HHHHhhC------CCCEEEECChhhCC--------cCCCcC
Confidence 3578999999999999998888654 799999999999 9998875 24778999987642 136899
Q ss_pred EEEECCCCCC-ccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVTPPYTA-VDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~dPPy~~-~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+|++...+.. .+....++.+. ++|+|||++++.....
T Consensus 120 ~v~~~~~l~~~~d~~~~l~~~~--~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 120 AVFSNAMLHWVKEPEAAIASIH--QALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEEEESCGGGCSCHHHHHHHHH--HHEEEEEEEEEEEECT
T ss_pred EEEEcchhhhCcCHHHHHHHHH--HhcCCCcEEEEEecCC
Confidence 9999765432 45667777765 4899999999877643
No 215
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.15 E-value=2.9e-11 Score=109.30 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=74.3
Q ss_pred CCCeEEEECCCcchHHHHHHHc----C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH--HHHHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR----G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~----G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~--l~~~~~~~~ 227 (317)
++.+|||+|||+|..++.+++. + ..+|++||+++.++ +.|+ + +.++++++++|+.+. +...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l-~~a~-~-----~~~~v~~~~gD~~~~~~l~~~----- 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC-QIPA-S-----DMENITLHQGDCSDLTTFEHL----- 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC-CCCG-G-----GCTTEEEEECCSSCSGGGGGG-----
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH-HHHh-c-----cCCceEEEECcchhHHHHHhh-----
Confidence 4679999999999999987765 2 45899999999998 8776 2 235699999998764 2211
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcC-CcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSA-LVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~-lLkpgG~ivv~~ 269 (317)
...+||+|++|... ..+...+..+. + .|+|||+++++.
T Consensus 149 ~~~~fD~I~~d~~~--~~~~~~l~~~~--r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 149 REMAHPLIFIDNAH--ANTFNIMKWAV--DHLLEEGDYFIIED 187 (236)
T ss_dssp SSSCSSEEEEESSC--SSHHHHHHHHH--HHTCCTTCEEEECS
T ss_pred ccCCCCEEEECCch--HhHHHHHHHHH--HhhCCCCCEEEEEe
Confidence 12369999998753 35666666553 3 899999999963
No 216
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.14 E-value=1.3e-10 Score=109.01 Aligned_cols=112 Identities=11% Similarity=-0.019 Sum_probs=77.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCC-----ceEEEEecH------HHHHHHHh
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-----VSSIHTVRV------ETFLERAE 223 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~-----~v~ii~gD~------~~~l~~~~ 223 (317)
.+.+|||+|||+|......+..+..+|+|+|+++.++ +.|++.....+... +++++..|+ .+...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l-~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~--- 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAI-ARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE--- 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT---
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHH-HHHHHHHHhccccccccccccchhhhhcccchhhhhhhc---
Confidence 4789999999999866666666666899999999999 99999887665421 256777776 22211
Q ss_pred hhcCCCCCccEEEECCCCC----CccHHHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 224 QFVGKDGPFDYMSVTPPYT----AVDYEVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 224 ~~~~~~~~fDlV~~dPPy~----~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
+...++||+|++.--.+ .......++.+. ++|+|||++++.......
T Consensus 124 --~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~--r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 124 --VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLS--ELTASGGKVLITTMDGDK 174 (302)
T ss_dssp --TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHH--HHEEEEEEEEEEEECHHH
T ss_pred --cccCCCeeEEEECchHHHhCCHHHHHHHHHHHH--HHcCCCCEEEEEeCCHHH
Confidence 11246899998742211 113355566655 589999999998875433
No 217
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=8.5e-11 Score=106.66 Aligned_cols=115 Identities=17% Similarity=0.076 Sum_probs=85.8
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceE
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSS 209 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ 209 (317)
++....+.+.+.+.+.. .++.+|||+|||+|.+++.++..++ +|+++|+++.++ +.++++. +++
T Consensus 16 ~~~~~~~~~~l~~~~~~-------~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~-~~a~~~~-------~~~ 79 (261)
T 3ege_A 16 RVPDIRIVNAIINLLNL-------PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMR-QQAVVHP-------QVE 79 (261)
T ss_dssp BCCCHHHHHHHHHHHCC-------CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHH-HSSCCCT-------TEE
T ss_pred ccccHHHHHHHHHHhCC-------CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHH-HHHHhcc-------CCE
Confidence 44445677777777643 3678999999999999998887664 799999999998 8776654 488
Q ss_pred EEEecHHHHHHHHhhhcCCCCCccEEEECCCC-CCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 210 IHTVRVETFLERAEQFVGKDGPFDYMSVTPPY-TAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 210 ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy-~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++.+|+.++ +..+++||+|++.... +..+....++.+. ++|+ ||++++...
T Consensus 80 ~~~~d~~~~-------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~--~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 80 WFTGYAENL-------ALPDKSVDGVISILAIHHFSHLEKSFQEMQ--RIIR-DGTIVLLTF 131 (261)
T ss_dssp EECCCTTSC-------CSCTTCBSEEEEESCGGGCSSHHHHHHHHH--HHBC-SSCEEEEEE
T ss_pred EEECchhhC-------CCCCCCEeEEEEcchHhhccCHHHHHHHHH--HHhC-CcEEEEEEc
Confidence 999998763 2235789999987543 2346677777775 4899 996655443
No 218
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.13 E-value=2.3e-10 Score=102.04 Aligned_cols=107 Identities=10% Similarity=-0.036 Sum_probs=78.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||+|||+|.++..++..+. +|+++|+++.++ +.+++|+. ..+++++++|+.+...... ++ ....||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~-~~a~~~~~----~~~~~~~~~d~~~~~~~~~-~~-~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSAL-EIAAKENT----AANISYRLLDGLVPEQAAQ-IH-SEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHH-HHHHHHSC----CTTEEEEECCTTCHHHHHH-HH-HHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHH-HHHHHhCc----ccCceEEECcccccccccc-cc-cccCcc
Confidence 3578999999999999999988877 799999999999 99998873 2358999999877532110 00 012489
Q ss_pred EEEECCCCCC-c--cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTA-V--DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~-~--~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|+++..++. . +....++.+. ++|+|||++++...
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLR--ILLGKQGAMYLIEL 164 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHH--HHHTTTCEEEEEEE
T ss_pred EEEEcchhhcCCHHHHHHHHHHHH--HHcCCCCEEEEEeC
Confidence 9999765433 2 4556676665 48999998766543
No 219
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.13 E-value=3.1e-11 Score=108.48 Aligned_cols=104 Identities=12% Similarity=0.062 Sum_probs=77.8
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCC-HHHHHHHH---HHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMD-PWVVSNVL---IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin-~~al~~~a---r~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
++.+|||+|||+|.+++.++.+ ...+|++||++ +.++ +.| ++|++..++. +++++++|+.++.... .
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml-~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~------~ 95 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLF-DISKKIIKKPSKGGLS-NVVFVIAAAESLPFEL------K 95 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGH-HHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGG------T
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHH-HHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhc------c
Confidence 5789999999999999987753 33479999999 7776 777 8888888886 4899999987652111 2
Q ss_pred CCccEEEECCCCCCc------cHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 230 GPFDYMSVTPPYTAV------DYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~------~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+.+|.|.+++|+... .....++.+. ++|+|||++++.
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~--r~LkpGG~l~i~ 138 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVA--DLAKKEAHFEFV 138 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHH--TTEEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHH--HhcCCCcEEEEE
Confidence 568889999886431 1133455543 799999999983
No 220
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.12 E-value=1.6e-10 Score=100.74 Aligned_cols=100 Identities=14% Similarity=0.010 Sum_probs=77.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..+ +..+|+++|+++.++ +.+++|. .+++++++|+.+. +..+++||+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~-~~a~~~~------~~~~~~~~d~~~~-------~~~~~~fD~ 98 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAML-AVGRRRA------PEATWVRAWGEAL-------PFPGESFDV 98 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHH-HHHHHHC------TTSEEECCCTTSC-------CSCSSCEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHH-HHHHHhC------CCcEEEEcccccC-------CCCCCcEEE
Confidence 6789999999999998765 555899999999999 9998886 3478899998653 223568999
Q ss_pred EEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 235 MSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 235 V~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
|++..... ..+....++.+. ++|+|||++++......
T Consensus 99 v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 99 VLLFTTLEFVEDVERVLLEAR--RVLRPGGALVVGVLEAL 136 (211)
T ss_dssp EEEESCTTTCSCHHHHHHHHH--HHEEEEEEEEEEEECTT
T ss_pred EEEcChhhhcCCHHHHHHHHH--HHcCCCCEEEEEecCCc
Confidence 99876543 235667777765 48999999998876443
No 221
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.12 E-value=1.8e-10 Score=95.73 Aligned_cols=105 Identities=10% Similarity=-0.010 Sum_probs=74.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--HHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~~~~~~~~~ 229 (317)
.++.+|||+|||+|.++..+++. |. .+++++|+++ ++ +. .+++++.+|+.+... ..... ...
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~-~~-----------~~~~~~~~d~~~~~~~~~~~~~-~~~ 86 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD-PI-----------VGVDFLQGDFRDELVMKALLER-VGD 86 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC-CC-----------TTEEEEESCTTSHHHHHHHHHH-HTT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc-cc-----------CcEEEEEcccccchhhhhhhcc-CCC
Confidence 35789999999999999988776 43 6899999999 75 43 348899999876520 00000 124
Q ss_pred CCccEEEECCCCCCc-cH-----------HHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 230 GPFDYMSVTPPYTAV-DY-----------EVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~-~~-----------~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
++||+|++|+|+... .. ...++.+. ++|+|||++++.......
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCR--DVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHH--HHEEEEEEEEEEEESSTT
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHH--HHcCCCcEEEEEEecCCc
Confidence 689999999987532 22 34444444 589999999987765544
No 222
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.11 E-value=1.5e-11 Score=110.42 Aligned_cols=111 Identities=13% Similarity=0.046 Sum_probs=78.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC----------------------------C
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF----------------------------L 205 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl----------------------------~ 205 (317)
.++.+|||+|||+|.+++.++..+..+|+++|+++.++ +.+++++...+. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNL-WELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHH-HHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHH-HHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 46789999999999999988877766899999999999 999998865431 0
Q ss_pred Cce-EEEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-----CccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 206 DVS-SIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-----AVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 206 ~~v-~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-----~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+++ +++.+|+.+..... +...++||+|++.-... ...+...++.+. ++|+|||++++...
T Consensus 134 ~~v~~~~~~d~~~~~~~~---~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~--~~LkpgG~li~~~~ 199 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLG---GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLG--SLLKPGGFLVMVDA 199 (265)
T ss_dssp HHEEEEEECCTTSSSTTT---TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHH--TTEEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCC---ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHH--hhCCCCcEEEEEec
Confidence 126 88999987642100 01126899999863221 013344555543 79999999998763
No 223
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.10 E-value=3.9e-10 Score=102.52 Aligned_cols=125 Identities=12% Similarity=-0.009 Sum_probs=81.7
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCc
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDV 207 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~ 207 (317)
.|....+...+.+.+.... ..++.+|||+|||+|.++..++.. | ..+|+++|+++.++ +.+.+.++.. .+
T Consensus 55 ~~~~skla~~ll~~l~~~~----l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l-~~l~~~a~~r---~n 126 (232)
T 3id6_C 55 NAFRSKLAGAILKGLKTNP----IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVV-RELLLVAQRR---PN 126 (232)
T ss_dssp CTTTCHHHHHHHTTCSCCS----CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHH-HHHHHHHHHC---TT
T ss_pred chHHHHHHHHHHhhhhhcC----CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHH-HHHHHHhhhc---CC
Confidence 4444555666655543210 146899999999999999887654 3 45899999999987 6555544432 34
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++++.+|+....... ...++||+|++|.+. .+..+.+.... .+.|+|||++++..
T Consensus 127 v~~i~~Da~~~~~~~----~~~~~~D~I~~d~a~--~~~~~il~~~~-~~~LkpGG~lvisi 181 (232)
T 3id6_C 127 IFPLLADARFPQSYK----SVVENVDVLYVDIAQ--PDQTDIAIYNA-KFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCTTCGGGTT----TTCCCEEEEEECCCC--TTHHHHHHHHH-HHHEEEEEEEEEEE
T ss_pred eEEEEcccccchhhh----ccccceEEEEecCCC--hhHHHHHHHHH-HHhCCCCeEEEEEE
Confidence 899999987532100 113689999999765 23333332221 23799999999874
No 224
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.09 E-value=6.9e-11 Score=119.71 Aligned_cols=101 Identities=15% Similarity=0.052 Sum_probs=77.0
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc--------C--------CCEEEEEeCCHHHH
Q 021116 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR--------G--------CSEVHFVEMDPWVV 191 (317)
Q Consensus 128 ~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~--------G--------a~~V~aVDin~~al 191 (317)
+...|...+.+.+.+++.. ...+|+|+|||||.+.++++.. + ...++|+|+|+.++
T Consensus 225 G~fyTP~~Vv~lmv~ll~p--------~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLEP--------YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp TTTCCCHHHHHHHHHHHCC--------CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred CeEeCCHHHHHHHHHHHhc--------CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 3456777888888888754 2349999999999999887531 0 23699999999998
Q ss_pred HHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC
Q 021116 192 SNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 192 ~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
++|+.|+...|+..++.+.++|...... ....+||+|++||||..
T Consensus 297 -~lA~~Nl~l~gi~~~i~i~~gDtL~~~~------~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 297 -KLAAMNMVIRGIDFNFGKKNADSFLDDQ------HPDLRADFVMTNPPFNM 341 (544)
T ss_dssp -HHHHHHHHHTTCCCBCCSSSCCTTTSCS------CTTCCEEEEEECCCSSC
T ss_pred -HHHHHHHHHhCCCcccceeccchhcCcc------cccccccEEEECCCcCC
Confidence 9999999999987655557888654210 12368999999999974
No 225
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.09 E-value=2.9e-10 Score=104.03 Aligned_cols=116 Identities=12% Similarity=0.041 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++.+++.+|+.+|++||+|+.++ +.+++| . .++++++++
T Consensus 17 ~~i~~~iv~~~~~-------~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~-~~~~~~-~----~~~v~~i~~ 83 (249)
T 3ftd_A 17 EGVLKKIAEELNI-------EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMV-ENLKSI-G----DERLEVINE 83 (249)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHH-HHHTTS-C----CTTEEEECS
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHH-HHHHhc-c----CCCeEEEEc
Confidence 4566677666653 36789999999999999999888767899999999999 999887 2 245899999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+.++.-. ...+. ..|+.|+||.. ...++..+.+....-+.+++++...
T Consensus 84 D~~~~~~~-----~~~~~-~~vv~NlPy~i--~~~il~~ll~~~~~~~~~~~m~Qke 132 (249)
T 3ftd_A 84 DASKFPFC-----SLGKE-LKVVGNLPYNV--ASLIIENTVYNKDCVPLAVFMVQKE 132 (249)
T ss_dssp CTTTCCGG-----GSCSS-EEEEEECCTTT--HHHHHHHHHHTGGGCSEEEEEEEHH
T ss_pred chhhCChh-----HccCC-cEEEEECchhc--cHHHHHHHHhcCCCCceEEEEEeHH
Confidence 98765210 00123 48899999964 3344444443333455666666543
No 226
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.09 E-value=2.3e-10 Score=106.25 Aligned_cols=91 Identities=14% Similarity=0.092 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++ +|||+|||+|.++..++.++. +|++||+|+.++ +.+++|+.. ++++++++
T Consensus 33 ~~i~~~Iv~~~~~-------~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~-~~l~~~~~~----~~v~vi~~ 98 (271)
T 3fut_A 33 EAHLRRIVEAARP-------FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLR-PVLEETLSG----LPVRLVFQ 98 (271)
T ss_dssp HHHHHHHHHHHCC-------CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGH-HHHHHHTTT----SSEEEEES
T ss_pred HHHHHHHHHhcCC-------CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHH-HHHHHhcCC----CCEEEEEC
Confidence 4466667676654 356 999999999999999998874 799999999999 999998762 46999999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCCc
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTAV 244 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~ 244 (317)
|+.++... ....+|.|+.|+||...
T Consensus 99 D~l~~~~~------~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 99 DALLYPWE------EVPQGSLLVANLPYHIA 123 (271)
T ss_dssp CGGGSCGG------GSCTTEEEEEEECSSCC
T ss_pred ChhhCChh------hccCccEEEecCccccc
Confidence 99875211 01368999999999753
No 227
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.07 E-value=6.7e-10 Score=100.88 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++..++.++ .+|++||+|+.++ +.+++|++.. ++++++++
T Consensus 16 ~~~~~~i~~~~~~-------~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~-~~a~~~~~~~---~~v~~~~~ 83 (244)
T 1qam_A 16 KHNIDKIMTNIRL-------NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLC-KTTENKLVDH---DNFQVLNK 83 (244)
T ss_dssp HHHHHHHHTTCCC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHH-HHHHHHTTTC---CSEEEECC
T ss_pred HHHHHHHHHhCCC-------CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHH-HHHHHhhccC---CCeEEEEC
Confidence 4455555554432 357899999999999999998887 5799999999999 9999998642 46999999
Q ss_pred cHHHHHHHHhhhcCC-CCCccEEEECCCCCC
Q 021116 214 RVETFLERAEQFVGK-DGPFDYMSVTPPYTA 243 (317)
Q Consensus 214 D~~~~l~~~~~~~~~-~~~fDlV~~dPPy~~ 243 (317)
|+.++. .. ...| .|+.||||..
T Consensus 84 D~~~~~-------~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 84 DILQFK-------FPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CGGGCC-------CCSSCCC-EEEEECCGGG
T ss_pred hHHhCC-------cccCCCe-EEEEeCCccc
Confidence 987642 11 1234 6899999964
No 228
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.06 E-value=1.9e-10 Score=108.17 Aligned_cols=91 Identities=14% Similarity=0.078 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++..++.++ .+|++||+|+.++ +.+++|++. . ++++++++
T Consensus 36 ~~i~~~Iv~~l~~-------~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li-~~a~~~~~~--~-~~v~vi~g 103 (295)
T 3gru_A 36 KNFVNKAVESANL-------TKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLE-PYANKLKEL--Y-NNIEIIWG 103 (295)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGH-HHHHHHHHH--C-SSEEEEES
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHH-HHHHHHhcc--C-CCeEEEEC
Confidence 4566667666643 367899999999999999988875 5899999999999 999999873 2 45999999
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCC
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
|+.++. + ....||.|+.|+||..
T Consensus 104 D~l~~~--~-----~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 104 DALKVD--L-----NKLDFNKVVANLPYQI 126 (295)
T ss_dssp CTTTSC--G-----GGSCCSEEEEECCGGG
T ss_pred chhhCC--c-----ccCCccEEEEeCcccc
Confidence 987642 1 1246999999999964
No 229
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.06 E-value=7.3e-11 Score=108.83 Aligned_cols=98 Identities=7% Similarity=0.004 Sum_probs=77.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh--CC-CCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT--GF-LDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~--gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.+.+|||+|||+|.++.++++.+ .+|++||+|+.++ +.|++|+... ++ .++++++.+|+.+++ ++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i-~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----------~~ 139 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKIL-DSFISFFPHFHEVKNNKNFTHAKQLLDLDI----------KK 139 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHH-GGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------CC
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHH-HHHHHHHHhhccccCCCeEEEEechHHHHH----------hh
Confidence 46899999999999999988776 8999999999999 9999887542 22 257999999987653 57
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
||+|++|.+-. ...++.+. +.|+|||++++...
T Consensus 140 fD~Ii~d~~dp----~~~~~~~~--~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 140 YDLIFCLQEPD----IHRIDGLK--RMLKEDGVFISVAK 172 (262)
T ss_dssp EEEEEESSCCC----HHHHHHHH--TTEEEEEEEEEEEE
T ss_pred CCEEEECCCCh----HHHHHHHH--HhcCCCcEEEEEcC
Confidence 99999996421 22455554 68999999998754
No 230
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.05 E-value=5.8e-10 Score=105.98 Aligned_cols=103 Identities=13% Similarity=0.004 Sum_probs=80.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.+++.++... ..+++++|+ +.++ +.|++|+...++.++++++.+|+.+.+ ...||
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D 250 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPA-ERARRRFADAGLADRVTVAEGDFFKPL---------PVTAD 250 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTSCC---------SCCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCCcC---------CCCCC
Confidence 56899999999999999888764 348999999 9999 999999999998878999999986522 13499
Q ss_pred EEEECCCCCCc-c--HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTAV-D--YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~~-~--~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++...++.. + ...+++.+. +.|+|||++++...
T Consensus 251 ~v~~~~vl~~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALTILRGCV--RALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEC
T ss_pred EEEEeccccCCCHHHHHHHHHHHH--HhcCCCcEEEEEec
Confidence 99997654322 2 135566554 48999998887554
No 231
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.05 E-value=4.4e-10 Score=99.21 Aligned_cols=98 Identities=14% Similarity=0.082 Sum_probs=73.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..+. +|+++|+++.++ +.++++. .+++++.+|+.+.. . .++||+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~-~~a~~~~------~~~~~~~~d~~~~~-------~-~~~~D~ 103 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDML-THARKRL------PDATLHQGDMRDFR-------L-GRKFSA 103 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHH-HHHHHHC------TTCEEEECCTTTCC-------C-SSCEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHH-HHHHHhC------CCCEEEECCHHHcc-------c-CCCCcE
Confidence 578999999999999998888765 799999999999 9998874 23789999987642 1 468999
Q ss_pred EEE-CCCC-CC---ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 235 MSV-TPPY-TA---VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 235 V~~-dPPy-~~---~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|++ .-.. +. ......++.+. ++|+|||+++++..
T Consensus 104 v~~~~~~~~~~~~~~~~~~~l~~~~--~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 104 VVSMFSSVGYLKTTEELGAAVASFA--EHLEPGGVVVVEPW 142 (239)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHH--HTEEEEEEEEECCC
T ss_pred EEEcCchHhhcCCHHHHHHHHHHHH--HhcCCCeEEEEEec
Confidence 995 3121 11 12344555554 58999999999754
No 232
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.04 E-value=1.4e-09 Score=114.39 Aligned_cols=122 Identities=11% Similarity=0.092 Sum_probs=87.7
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhHHHh------
Q 021116 131 PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWT------ 202 (317)
Q Consensus 131 pt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga--~~V~aVDin~~al~~~ar~N~~~~------ 202 (317)
|......+.+.+.+.. .++.+|||+|||+|.+++.++..+. .+|++||+++.++ +.|+++++..
T Consensus 704 PL~eqRle~LLelL~~-------~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emL-e~AReRLa~~lnAkr~ 775 (950)
T 3htx_A 704 PLSKQRVEYALKHIRE-------SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGL-ARAAKMLHVKLNKEAC 775 (950)
T ss_dssp CHHHHHHHHHHHHHHH-------SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHH-HHHHHHHHHHTTTTCS
T ss_pred hHHHHHHHHHHHHhcc-------cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHH-HHHHHHhhhccchhhc
Confidence 4444455566677765 3688999999999999998888763 5899999999999 9999976532
Q ss_pred CCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCcc---HHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 203 GFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVD---YEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 203 gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~---~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
++. +++++++|+.++. ...+.||+|++.-....-. ....++.+. ++|+|| ++++..+.
T Consensus 776 gl~-nVefiqGDa~dLp-------~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~--RvLKPG-~LIISTPN 836 (950)
T 3htx_A 776 NVK-SATLYDGSILEFD-------SRLHDVDIGTCLEVIEHMEEDQACEFGEKVL--SLFHPK-LLIVSTPN 836 (950)
T ss_dssp SCS-EEEEEESCTTSCC-------TTSCSCCEEEEESCGGGSCHHHHHHHHHHHH--HTTCCS-EEEEEECB
T ss_pred CCC-ceEEEECchHhCC-------cccCCeeEEEEeCchhhCChHHHHHHHHHHH--HHcCCC-EEEEEecC
Confidence 443 5999999987642 2357899999965432211 223444444 589999 77776643
No 233
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.03 E-value=6.1e-10 Score=105.43 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=80.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.+++.++..+ ..+++++|+ +.++ +.|++|++..++.++++++.+|+.+.+ ...||
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D 251 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTV-DTARSYLKDEGLSDRVDVVEGDFFEPL---------PRKAD 251 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHH-HHHHHHHHHTTCTTTEEEEECCTTSCC---------SSCEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCCCC---------CCCcc
Confidence 56899999999999999888764 347999999 8998 999999999998878999999986522 23499
Q ss_pred EEEECCCCCCccH---HHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 234 YMSVTPPYTAVDY---EVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 234 lV~~dPPy~~~~~---~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|++...++...- ..+++.+. +.|+|||++++....
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCA--EALEPGGRILIHERD 290 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HTEEEEEEEEEEECC
T ss_pred EEEEcccccCCCHHHHHHHHHHHH--HhcCCCcEEEEEEEe
Confidence 9998765432221 34566554 589999998876543
No 234
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.02 E-value=6.8e-10 Score=116.36 Aligned_cols=108 Identities=14% Similarity=0.111 Sum_probs=72.9
Q ss_pred CCCCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcC----CCEEEEEeCCHHHHHHHH--HHhHHH
Q 021116 128 DVRPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRG----CSEVHFVEMDPWVVSNVL--IPNLEW 201 (317)
Q Consensus 128 ~~rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~G----a~~V~aVDin~~al~~~a--r~N~~~ 201 (317)
+..+|...+++.+.+++..... .....+.+|||+|||||.+.++++.+. ..+++|+|+|+.++ +.| +.|+..
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~-~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al-~LAK~RlNL~l 372 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILG-RPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFL-ELLSIRLGLLF 372 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHC-SCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGH-HHHHHHHHTTS
T ss_pred ceEcCCHHHHHHHHHHHhhhcc-ccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHH-HHHHHHHHHHH
Confidence 4466777788887776211100 001247899999999999999887653 23699999999998 999 888776
Q ss_pred hCCCC---ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC
Q 021116 202 TGFLD---VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 202 ~gl~~---~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
+++.. ...+...|..+.... ....||+|++||||..
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~~~------~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLNPE------DFANVSVVVMNPPYVS 411 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCCGG------GGTTEEEEEECCBCCS
T ss_pred hhhhcCCCcceEEecchhccccc------ccCCCCEEEECCCccc
Confidence 43321 134555665542100 1367999999999964
No 235
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.01 E-value=2.9e-10 Score=116.93 Aligned_cols=102 Identities=13% Similarity=0.142 Sum_probs=76.1
Q ss_pred CCCeEEEECCCcchHH---HHHHHcCCC--EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGTGSVG---IEAISRGCS--EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~---Ieaas~Ga~--~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
++..|||+|||+|.+. +.|+++++. +|+|||.|+.| ..|+++.+.||++++|+++++|++++. ..
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A--~~a~~~v~~N~~~dkVtVI~gd~eev~--------LP 426 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA--VVTLENWQFEEWGSQVTVVSSDMREWV--------AP 426 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH--HHHHHHHHHHTTGGGEEEEESCTTTCC--------CS
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH--HHHHHHHHhccCCCeEEEEeCcceecc--------CC
Confidence 4568999999999994 445455444 68999999966 589999999999999999999999872 24
Q ss_pred CCccEEEECCCCCCccHHHHHHHHH-HcCCcCCCeEEE
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQIS-KSALVGKDSFIV 266 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~-~~~lLkpgG~iv 266 (317)
+++|+||....=....+|-.++.+. ..++|+|||+++
T Consensus 427 EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 427 EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 7899999986411123333333332 247999999976
No 236
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.00 E-value=1.5e-09 Score=98.15 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=75.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..|. +|+++|+++.++ +.++++.. +. ++.+|+.+. +..+++||+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l-~~a~~~~~-----~~--~~~~d~~~~-------~~~~~~fD~ 117 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEML-EVAREKGV-----KN--VVEAKAEDL-------PFPSGAFEA 117 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHH-HHHHHHTC-----SC--EEECCTTSC-------CSCTTCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHH-HHHHhhcC-----CC--EEECcHHHC-------CCCCCCEEE
Confidence 578999999999999998888765 799999999999 99988754 11 788887653 123578999
Q ss_pred EEECCCC-CC-ccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 235 MSVTPPY-TA-VDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 235 V~~dPPy-~~-~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|++.... +. .+....++.+. ++|+|||++++....
T Consensus 118 v~~~~~~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 118 VLALGDVLSYVENKDKAFSEIR--RVLVPDGLLIATVDN 154 (260)
T ss_dssp EEECSSHHHHCSCHHHHHHHHH--HHEEEEEEEEEEEEB
T ss_pred EEEcchhhhccccHHHHHHHHH--HHcCCCeEEEEEeCC
Confidence 9986432 11 24566666665 489999999987653
No 237
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.00 E-value=6.3e-10 Score=102.20 Aligned_cols=112 Identities=12% Similarity=0.054 Sum_probs=71.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh-----------------CCCC----------
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT-----------------GFLD---------- 206 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~-----------------gl~~---------- 206 (317)
.++.+|||+|||+|...+.++..+..+|+++|+++.++ +.|+++++.. +...
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l-~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNR-QELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHH-HHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHH-HHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 36789999999999976544444445899999999999 9998866421 1000
Q ss_pred --ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC-----ccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 207 --VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA-----VDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 207 --~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~-----~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.++++.+|+.+.+.... .....++||+|++.--+.. .+....++.+. ++|+|||++++..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~--r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGA-GSPAPLPADALVSAFCLEAVSPDLASFQRALDHIT--TLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCS-SCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHH--TTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccc-cccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHH--HhcCCCCEEEEEE
Confidence 14566678765221000 0012356999999743221 12344454443 7999999999863
No 238
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.99 E-value=1.2e-09 Score=102.09 Aligned_cols=104 Identities=16% Similarity=0.119 Sum_probs=79.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.++..++... ..+++++|++ .++ +.|++|+...++.++++++.+|+.+.. . .+.||
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~~D 234 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVL-EVAKENARIQGVASRYHTIAGSAFEVD--Y------GNDYD 234 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHH-HHHHHHHHHHTCGGGEEEEESCTTTSC--C------CSCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHH-HHHHHHHHhcCCCcceEEEecccccCC--C------CCCCc
Confidence 46899999999999999887762 3489999999 998 999999999998878999999987531 1 23499
Q ss_pred EEEECCC-CCCc--cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPP-YTAV--DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPP-y~~~--~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.-. +... ....+++.+. +.|+|||++++...
T Consensus 235 ~v~~~~~l~~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 235 LVLLPNFLHHFDVATCEQLLRKIK--TALAVEGKVIVFDF 272 (335)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEEC
T ss_pred EEEEcchhccCCHHHHHHHHHHHH--HhCCCCcEEEEEee
Confidence 9998433 3321 2345566654 47999998877654
No 239
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.99 E-value=8.6e-10 Score=96.22 Aligned_cols=100 Identities=16% Similarity=0.201 Sum_probs=75.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++..| .+|+++|+++.++ +.++++.. +++.+|+.++. .+..+++||+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~-~~~~~~~~--------~~~~~d~~~~~-----~~~~~~~fD~ 96 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAA-EQAKEKLD--------HVVLGDIETMD-----MPYEEEQFDC 96 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHH-HHHHTTSS--------EEEESCTTTCC-----CCSCTTCEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHH-HHHHHhCC--------cEEEcchhhcC-----CCCCCCccCE
Confidence 57899999999999999888776 6899999999998 88887642 57888876531 1123468999
Q ss_pred EEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 235 MSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 235 V~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|++.-... ..+....++.+. ++|+|||++++..+.
T Consensus 97 v~~~~~l~~~~~~~~~l~~~~--~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 97 VIFGDVLEHLFDPWAVIEKVK--PYIKQNGVILASIPN 132 (230)
T ss_dssp EEEESCGGGSSCHHHHHHHTG--GGEEEEEEEEEEEEC
T ss_pred EEECChhhhcCCHHHHHHHHH--HHcCCCCEEEEEeCC
Confidence 99865432 234566666654 589999999998654
No 240
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.99 E-value=4e-10 Score=98.69 Aligned_cols=105 Identities=5% Similarity=-0.071 Sum_probs=69.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH--HHHhh-hc-CCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL--ERAEQ-FV-GKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l--~~~~~-~~-~~~ 229 (317)
.++.+|||+|||+|.++..++.++ .+|++||+++.. .. .+++++++|+.+.. ..... +. ...
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~~------------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEME------------EI-AGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCCC------------CC-TTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeecCCHHHHHHHHcC-CcEEEEeccccc------------cC-CCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 368899999999999999888874 589999999842 12 24889999986531 10000 00 001
Q ss_pred CCccEEEECCCCCC-cc--H---------HHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 230 GPFDYMSVTPPYTA-VD--Y---------EVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 230 ~~fDlV~~dPPy~~-~~--~---------~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
++||+|++|++... +. . +..++. ..++|+|||.+++.......
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~--a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEI--AVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH--HHHHEEEEEEEEEEEECSTH
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHH--HHHHccCCCEEEEEEcCCCC
Confidence 38999999986542 21 1 122222 23689999999987654433
No 241
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.98 E-value=2.9e-09 Score=101.14 Aligned_cols=102 Identities=10% Similarity=0.056 Sum_probs=79.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.++..++++. ..+++++|+ +.++ +.+++|++..++.++++++.+|+.+.. -+.+|
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D 258 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAI-DLVNENAAEKGVADRMRGIAVDIYKES---------YPEAD 258 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCTTTEEEEECCTTTSC---------CCCCS
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHH-HHHHHHHHhcCCCCCEEEEeCccccCC---------CCCCC
Confidence 57899999999999999888763 348999999 9998 999999999998888999999987531 13459
Q ss_pred EEEECCCCC-Ccc--HHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYT-AVD--YEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~-~~~--~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|++.-.++ ..+ ...+++.+. +.|+|||++++..
T Consensus 259 ~v~~~~vlh~~~d~~~~~~l~~~~--~~L~pgG~l~i~e 295 (359)
T 1x19_A 259 AVLFCRILYSANEQLSTIMCKKAF--DAMRSGGRLLILD 295 (359)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--TTCCTTCEEEEEE
T ss_pred EEEEechhccCCHHHHHHHHHHHH--HhcCCCCEEEEEe
Confidence 999865443 222 345555554 6899999996654
No 242
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.98 E-value=4.5e-09 Score=100.58 Aligned_cols=103 Identities=17% Similarity=0.088 Sum_probs=80.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
+..+|||+|||+|.+++.+++.. ..+++++|+ +.++ +.|++++...++.++++++.+|+.+.+ ...||
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~l~~~v~~~~~d~~~~~---------p~~~D 270 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVA-EEARELLTGRGLADRCEILPGDFFETI---------PDGAD 270 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTTCC---------CSSCS
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHH-HHHHHhhhhcCcCCceEEeccCCCCCC---------CCCce
Confidence 46899999999999999887763 347999999 9998 999999999998888999999987321 23799
Q ss_pred EEEECCCCCCccHH---HHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTAVDYE---VLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~~~~~---~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.-..+...-+ .+++.+. +.|+|||++++...
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~--~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIA--TAMKPDSRLLVIDN 308 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--TTCCTTCEEEEEEE
T ss_pred EEEhhhhhccCCHHHHHHHHHHHH--HHcCCCCEEEEEEe
Confidence 99986443322222 4555554 68999999987653
No 243
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.98 E-value=1.8e-09 Score=103.15 Aligned_cols=106 Identities=16% Similarity=0.153 Sum_probs=79.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||+|||+|.+++.++++. ..+++++|+ +.++ +.|+++++..++.++++++.+|+.+.. ++. .+.||
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~-p~~~D 250 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQL-EMMRKQTAGLSGSERIHGHGANLLDRD-----VPF-PTGFD 250 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHH-HHHHHHHTTCTTGGGEEEEECCCCSSS-----CCC-CCCCS
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHH-HHHHHHHHhcCcccceEEEEccccccC-----CCC-CCCcC
Confidence 46899999999999999887753 348999999 9998 999999998888778999999986530 000 25799
Q ss_pred EEEECCCCCCcc---HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTAVD---YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~~~---~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.--.+... ...+++.+. +.|+|||++++...
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVA--QSIGKDSKVYIMET 288 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHH--HHCCTTCEEEEEEC
T ss_pred EEEEechhhhCCHHHHHHHHHHHH--HhcCCCcEEEEEee
Confidence 999854332212 234455554 47999999987654
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.96 E-value=1.8e-10 Score=104.27 Aligned_cols=99 Identities=12% Similarity=0.172 Sum_probs=68.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-ecHHHHH-HHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-VRVETFL-ERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-gD~~~~l-~~~~~~~~~~~~ 231 (317)
..+.+|||+|||||.++..++++|+.+|++||+++.++ +.+++|..... ... .++.... ..+ ....
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml-~~a~~~~~~~~------~~~~~~~~~~~~~~~-----~~~~ 103 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQL-AWKIRSDERVV------VMEQFNFRNAVLADF-----EQGR 103 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCC-CHHHHTCTTEE------EECSCCGGGCCGGGC-----CSCC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHH-HHHHHhCcccc------ccccceEEEeCHhHc-----CcCC
Confidence 46789999999999999999988877999999999999 88877644321 111 1221110 000 1123
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
||.+.+|..|.. +...+..+. ++|+|||++++.
T Consensus 104 ~d~~~~D~v~~~--l~~~l~~i~--rvLkpgG~lv~~ 136 (232)
T 3opn_A 104 PSFTSIDVSFIS--LDLILPPLY--EILEKNGEVAAL 136 (232)
T ss_dssp CSEEEECCSSSC--GGGTHHHHH--HHSCTTCEEEEE
T ss_pred CCEEEEEEEhhh--HHHHHHHHH--HhccCCCEEEEE
Confidence 688888876642 355666665 489999999886
No 245
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.93 E-value=2.8e-10 Score=106.85 Aligned_cols=100 Identities=11% Similarity=0.115 Sum_probs=69.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-ecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-VRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-gD~~~~l~~~~~~~~~~~~f 232 (317)
..+.+|||+|||||.++..++.+|+.+|++||+++.++ +.+.++- .++..+. .|+..... ..+ ....|
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL-~~a~r~~------~rv~~~~~~ni~~l~~--~~l--~~~~f 152 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQL-VWKLRQD------DRVRSMEQYNFRYAEP--VDF--TEGLP 152 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCS-CHHHHTC------TTEEEECSCCGGGCCG--GGC--TTCCC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHH-HHHHHhC------cccceecccCceecch--hhC--CCCCC
Confidence 46789999999999999988889988999999999998 7754431 1222221 23332210 001 12359
Q ss_pred cEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 233 DYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 233 DlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
|+|++|--|. .+...+..+. ++|+|||.+++.
T Consensus 153 D~v~~d~sf~--sl~~vL~e~~--rvLkpGG~lv~l 184 (291)
T 3hp7_A 153 SFASIDVSFI--SLNLILPALA--KILVDGGQVVAL 184 (291)
T ss_dssp SEEEECCSSS--CGGGTHHHHH--HHSCTTCEEEEE
T ss_pred CEEEEEeeHh--hHHHHHHHHH--HHcCcCCEEEEE
Confidence 9999997664 4456666665 489999999886
No 246
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.92 E-value=4e-09 Score=98.95 Aligned_cols=103 Identities=10% Similarity=0.024 Sum_probs=79.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||+|||+|.++..+++.. ..+++++|+ +.++ +.+++++...++.++++++.+|+.+.+ ...||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------p~~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPA-SAAHRRFLDTGLSGRAQVVVGSFFDPL---------PAGAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-HHHHHHHHHTTCTTTEEEEECCTTSCC---------CCSCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHH-HHHHHhhhhcCcCcCeEEecCCCCCCC---------CCCCc
Confidence 35799999999999999887753 347999999 9998 999999999998888999999986321 13799
Q ss_pred EEEECCCCC-Ccc--HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AVD--YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~--~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.--.+ ..+ ...+++.+. +.|+|||++++...
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCA--EAAGSGGVVLVIEA 275 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHHTTTCEEEEEEC
T ss_pred EEEEehhhccCCHHHHHHHHHHHH--HhcCCCCEEEEEee
Confidence 999854332 222 245566554 47999999988654
No 247
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.92 E-value=2e-09 Score=100.22 Aligned_cols=94 Identities=21% Similarity=0.224 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCC---EEEEEeCCHHHHHHHHHHhHHHhCCCCceEE
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCS---EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSI 210 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~---~V~aVDin~~al~~~ar~N~~~~gl~~~v~i 210 (317)
..+.+.+.+.+.. .++.+|||+|||+|.++..++.++.. +|++||+|+.++ +.+++|. .+++++
T Consensus 28 ~~i~~~iv~~~~~-------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l-~~a~~~~-----~~~v~~ 94 (279)
T 3uzu_A 28 HGVIDAIVAAIRP-------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLI-GRLEQRF-----GELLEL 94 (279)
T ss_dssp HHHHHHHHHHHCC-------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHH-HHHHHHH-----GGGEEE
T ss_pred HHHHHHHHHhcCC-------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHH-HHHHHhc-----CCCcEE
Confidence 4566667676654 36789999999999999988877542 299999999999 9999983 246999
Q ss_pred EEecHHHHHHHHhhhcC-CCCCccEEEECCCCC
Q 021116 211 HTVRVETFLERAEQFVG-KDGPFDYMSVTPPYT 242 (317)
Q Consensus 211 i~gD~~~~l~~~~~~~~-~~~~fDlV~~dPPy~ 242 (317)
+++|+.++.- ..+.. .....+.|+.|+||.
T Consensus 95 i~~D~~~~~~--~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 95 HAGDALTFDF--GSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp EESCGGGCCG--GGGSCSSSSCCEEEEEECCHH
T ss_pred EECChhcCCh--hHhcccccCCceEEEEccCcc
Confidence 9999987521 10000 001346899999996
No 248
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.91 E-value=7.2e-09 Score=95.50 Aligned_cols=112 Identities=11% Similarity=0.114 Sum_probs=74.5
Q ss_pred CCCeEEEECCCcchHHHHHH----HcC-CCEE--EEEeCCHHHHHHHHHHhHHHh-CCCC-ceEEEEecHHHHHHHHhhh
Q 021116 155 RPGRWLDLYSGTGSVGIEAI----SRG-CSEV--HFVEMDPWVVSNVLIPNLEWT-GFLD-VSSIHTVRVETFLERAEQF 225 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaa----s~G-a~~V--~aVDin~~al~~~ar~N~~~~-gl~~-~v~ii~gD~~~~l~~~~~~ 225 (317)
++.+|||+|||+|.++..++ .++ ..+| +++|.++.++ +.|+++++.. ++.+ ++.+..+|+.++..... .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml-~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQI-AKYKELVAKTSNLENVKFAWHKETSSEYQSRML-E 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHH-HHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHH-T
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHH-HHHHHHHHhccCCCcceEEEEecchhhhhhhhc-c
Confidence 46799999999998775432 222 2334 9999999999 9999988653 4433 23445677765432110 0
Q ss_pred cCCCCCccEEEECCCC-CCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 226 VGKDGPFDYMSVTPPY-TAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 226 ~~~~~~fDlV~~dPPy-~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+..+++||+|++.--. +..+....++.+. ++|+|||++++...
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~--r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFH--SLLGTNAKMLIIVV 173 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHH--HHcCCCcEEEEEEe
Confidence 0124789999986332 2345677787776 59999999998643
No 249
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.91 E-value=2.3e-09 Score=108.24 Aligned_cols=102 Identities=20% Similarity=0.165 Sum_probs=76.2
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc---C-----------CCEEEEEeCCHHHHHHHH
Q 021116 130 RPMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR---G-----------CSEVHFVEMDPWVVSNVL 195 (317)
Q Consensus 130 rpt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~---G-----------a~~V~aVDin~~al~~~a 195 (317)
..|...|.+.+.+++.+ ..+.+|+|++||||++-+++... . ...++|+|+++.++ .+|
T Consensus 199 fyTP~~Vv~lmv~l~~p-------~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~-~la 270 (530)
T 3ufb_A 199 FYTPRPVVRFMVEVMDP-------QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPY-LLV 270 (530)
T ss_dssp CCCCHHHHHHHHHHHCC-------CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHH-HHH
T ss_pred ECCcHHHHHHHHHhhcc-------CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHH-HHH
Confidence 45667788888888865 35779999999999999877531 1 13599999999998 999
Q ss_pred HHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC
Q 021116 196 IPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 196 r~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
+-|+-..|+.. ..+..+|........ .....+||+|+.||||+.
T Consensus 271 ~mNl~lhg~~~-~~I~~~dtL~~~~~~---~~~~~~fD~Il~NPPf~~ 314 (530)
T 3ufb_A 271 QMNLLLHGLEY-PRIDPENSLRFPLRE---MGDKDRVDVILTNPPFGG 314 (530)
T ss_dssp HHHHHHHTCSC-CEEECSCTTCSCGGG---CCGGGCBSEEEECCCSSC
T ss_pred HHHHHhcCCcc-ccccccccccCchhh---hcccccceEEEecCCCCc
Confidence 99999999864 567788865421000 011257999999999974
No 250
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.91 E-value=2.6e-09 Score=100.80 Aligned_cols=104 Identities=11% Similarity=0.087 Sum_probs=80.1
Q ss_pred CCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 156 PGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
+.+|||+|||+|.++..+++.. ..+++++|+ +.++ +.++++++..++.++++++.+|+.+.... ..+.||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTR-DAARKTIHAHDLGGRVEFFEKNLLDARNF------EGGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCGGGEEEEECCTTCGGGG------TTCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHH-HHHHHHHHhcCCCCceEEEeCCcccCccc------CCCCccE
Confidence 7899999999999999887763 358999999 8898 99999999999888899999998764210 1356999
Q ss_pred EEECCCCCCcc---HHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 235 MSVTPPYTAVD---YEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 235 V~~dPPy~~~~---~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
|++.-..+... ...+++.+. +.|+|||++++..
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~--~~L~pgG~l~i~e 287 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAA--GLVKPGGALLILT 287 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHH--HTEEEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHH--HHcCCCCEEEEEE
Confidence 99864433212 245555554 5899999998765
No 251
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.91 E-value=4.2e-09 Score=95.25 Aligned_cols=96 Identities=8% Similarity=0.054 Sum_probs=71.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.++..++.. +..+|+++|+++.++ +.|+++. .+++++.+|+.+. +..+++||
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-~~a~~~~------~~~~~~~~d~~~~-------~~~~~~fD 150 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAI-KAAAKRY------PQVTFCVASSHRL-------PFSDTSMD 150 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHH-HHHHHHC------TTSEEEECCTTSC-------SBCTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHhC------CCcEEEEcchhhC-------CCCCCcee
Confidence 5789999999999999988876 234899999999999 8988764 2378899997653 12346899
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+|++.... .. ++.+. ++|+|||++++..+..
T Consensus 151 ~v~~~~~~--~~----l~~~~--~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 151 AIIRIYAP--CK----AEELA--RVVKPGGWVITATPGP 181 (269)
T ss_dssp EEEEESCC--CC----HHHHH--HHEEEEEEEEEEEECT
T ss_pred EEEEeCCh--hh----HHHHH--HhcCCCcEEEEEEcCH
Confidence 99975321 12 33333 3789999999887644
No 252
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.91 E-value=2.1e-09 Score=100.70 Aligned_cols=101 Identities=12% Similarity=0.009 Sum_probs=78.7
Q ss_pred CeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEE
Q 021116 157 GRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYM 235 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV 235 (317)
.+|||+|||+|.++..++... ..+++++|+ +.++ +.+++|+...++.++++++.+|+.+.+ .+.||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~---------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSL-GVARDNLSSLLAGERVSLVGGDMLQEV---------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCT-HHHHHHTHHHHHTTSEEEEESCTTTCC---------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHH-HHHHHHHhhcCCCCcEEEecCCCCCCC---------CCCCCEE
Confidence 899999999999999887753 348999999 9998 999999988887778999999986521 2579999
Q ss_pred EECCCCC-Ccc--HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 236 SVTPPYT-AVD--YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 236 ~~dPPy~-~~~--~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++.-..+ ..+ ...+++.+. +.|+|||++++...
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCR--EAMAGDGRVVVIER 273 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHH--HHSCTTCEEEEEEC
T ss_pred EEchhccCCCHHHHHHHHHHHH--HhcCCCCEEEEEEe
Confidence 9865443 222 235555554 47999999988754
No 253
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.90 E-value=2.2e-09 Score=103.73 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=73.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEE-EecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH-TVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii-~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.++..++..|. +|+++|+++.++ +.|+++ ++.....++ ..++.++ .. .+++||
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~-~~a~~~----~~~~~~~~~~~~~~~~l-~~------~~~~fD 173 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVA-AKAREK----GIRVRTDFFEKATADDV-RR------TEGPAN 173 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHH-HHHHTT----TCCEECSCCSHHHHHHH-HH------HHCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHH-HHHHHc----CCCcceeeechhhHhhc-cc------CCCCEE
Confidence 578999999999999998888876 799999999998 888876 443211122 2333332 21 137899
Q ss_pred EEEECCCC-CCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPY-TAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy-~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.--+ +..+....++.+. ++|+|||+++++.+
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~--r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVD--ALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHH--HHcCCCeEEEEEeC
Confidence 99987543 2335667777775 48999999999865
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.89 E-value=4.7e-09 Score=106.42 Aligned_cols=76 Identities=21% Similarity=0.241 Sum_probs=65.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++++|+ +|+|||.++.++ +.|+..+...|.. ++++.++|+.++.... ..++||+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i-~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~-----~~~~fD~ 137 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENI-NVCRALAEENPDF-AAEFRVGRIEEVIAAL-----EEGEFDL 137 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTSTTS-EEEEEECCHHHHHHHC-----CTTSCSE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHH-HHHHHHHHhcCCC-ceEEEECCHHHHhhhc-----cCCCccE
Confidence 467999999999999999999987 699999999999 9999999877743 3899999999876543 2468999
Q ss_pred EEEC
Q 021116 235 MSVT 238 (317)
Q Consensus 235 V~~d 238 (317)
|++-
T Consensus 138 v~~~ 141 (569)
T 4azs_A 138 AIGL 141 (569)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9985
No 255
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.89 E-value=8.8e-09 Score=99.34 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=69.3
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCC-----CceEEEEecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFL-----DVSSIHTVRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~-----~~v~ii~gD~~~~l~~~~~~~~ 227 (317)
.+|.+|||+|||.|+-++.++..+. .+|+++|+++..+ +.+++|++.++.. +++.+...|+..+....
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~-~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~----- 220 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI-ARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE----- 220 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH-HHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-----
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH-HHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-----
Confidence 4689999999999999988777653 4799999999999 9999999998764 46888999988765432
Q ss_pred CCCCccEEEECCCCCC
Q 021116 228 KDGPFDYMSVTPPYTA 243 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~ 243 (317)
.+.||.|++|+|...
T Consensus 221 -~~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 221 -GDTYDRVLVDVPCTT 235 (359)
T ss_dssp -TTCEEEEEEECCCCC
T ss_pred -cccCCEEEECCccCC
Confidence 468999999999853
No 256
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.88 E-value=8.5e-09 Score=90.72 Aligned_cols=94 Identities=17% Similarity=0.176 Sum_probs=72.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..++.. +++|+++.++ +.+++| +++++.+|+.+. +...++||+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~-~~a~~~--------~~~~~~~d~~~~-------~~~~~~fD~ 105 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMA-EIARKR--------GVFVLKGTAENL-------PLKDESFDF 105 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHH-HHHHHT--------TCEEEECBTTBC-------CSCTTCEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHH-HHHHhc--------CCEEEEcccccC-------CCCCCCeeE
Confidence 3789999999999999876543 9999999999 999887 267889997653 123468999
Q ss_pred EEECCCCC-CccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 235 MSVTPPYT-AVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 235 V~~dPPy~-~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
|++.-.+. ..+....++.+. ++|+|||++++....
T Consensus 106 v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 106 ALMVTTICFVDDPERALKEAY--RILKKGGYLIVGIVD 141 (219)
T ss_dssp EEEESCGGGSSCHHHHHHHHH--HHEEEEEEEEEEEEC
T ss_pred EEEcchHhhccCHHHHHHHHH--HHcCCCcEEEEEEeC
Confidence 99875432 235566777765 489999999987654
No 257
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.87 E-value=1e-08 Score=91.45 Aligned_cols=105 Identities=11% Similarity=-0.064 Sum_probs=73.6
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC--CCceEEEEecHHHH--------------H
Q 021116 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF--LDVSSIHTVRVETF--------------L 219 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl--~~~v~ii~gD~~~~--------------l 219 (317)
.++||++||| .-++.+++....+|+.||.|++.+ +.|++|++.+|+ .++++++.+|+.+. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~-~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWA-RMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHH-HHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5799999985 566666554246899999999998 999999999998 78899999996432 1
Q ss_pred HHHh-hh-cC-CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 220 ERAE-QF-VG-KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 220 ~~~~-~~-~~-~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.... .. .. ..++||+||+|..+.. ..+.... ++|++||+|++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~~----~~~~~~l--~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFRV----GCALATA--FSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSHH----HHHHHHH--HHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCch----hHHHHHH--HhcCCCeEEEEeC
Confidence 1110 00 01 1367999999975321 2222222 3689999997765
No 258
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.87 E-value=3.8e-08 Score=90.84 Aligned_cols=109 Identities=15% Similarity=0.061 Sum_probs=77.6
Q ss_pred CCeEEEECCCc---chHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHH------hhh
Q 021116 156 PGRWLDLYSGT---GSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERA------EQF 225 (317)
Q Consensus 156 ~~rVLDlgcGt---G~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~------~~~ 225 (317)
..+|||+|||+ |.+...+.... ..+|++||+++.++ +.|++++.. .++++++++|+.+....+ ..+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l-~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVL-THGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHH-HHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHH-HHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccC
Confidence 47999999999 98876555432 35899999999999 999998743 246999999987532100 011
Q ss_pred cCCCCCccEEEECCCCCC-c--cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 226 VGKDGPFDYMSVTPPYTA-V--DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 226 ~~~~~~fDlV~~dPPy~~-~--~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
...+||+|++.--.+. . ....+++.+. +.|+|||++++.+...
T Consensus 154 --d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~--~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 --DFSRPAAIMLVGMLHYLSPDVVDRVVGAYR--DALAPGSYLFMTSLVD 199 (274)
T ss_dssp --CTTSCCEEEETTTGGGSCTTTHHHHHHHHH--HHSCTTCEEEEEEEBC
T ss_pred --CCCCCEEEEEechhhhCCcHHHHHHHHHHH--HhCCCCcEEEEEEecC
Confidence 1247999998754332 1 2566777775 4799999999887643
No 259
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.86 E-value=5.5e-09 Score=95.80 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE
Q 021116 135 VVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSE--VHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT 212 (317)
Q Consensus 135 ~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~--V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~ 212 (317)
.+.+.+.+.+.. .++.+|||+|||+|.++. + .++ .+ |++||+|+.++ +.+++|++.. +++++++
T Consensus 8 ~i~~~iv~~~~~-------~~~~~VLEIG~G~G~lt~-l-~~~-~~~~v~avEid~~~~-~~a~~~~~~~---~~v~~i~ 73 (252)
T 1qyr_A 8 FVIDSIVSAINP-------QKGQAMVEIGPGLAALTE-P-VGE-RLDQLTVIELDRDLA-ARLQTHPFLG---PKLTIYQ 73 (252)
T ss_dssp HHHHHHHHHHCC-------CTTCCEEEECCTTTTTHH-H-HHT-TCSCEEEECCCHHHH-HHHHTCTTTG---GGEEEEC
T ss_pred HHHHHHHHhcCC-------CCcCEEEEECCCCcHHHH-h-hhC-CCCeEEEEECCHHHH-HHHHHHhccC---CceEEEE
Confidence 455566666543 357899999999999999 5 444 46 99999999999 9999987643 3599999
Q ss_pred ecHHHH-HHHHhhhcCCCCCccEEEECCCCCC
Q 021116 213 VRVETF-LERAEQFVGKDGPFDYMSVTPPYTA 243 (317)
Q Consensus 213 gD~~~~-l~~~~~~~~~~~~fDlV~~dPPy~~ 243 (317)
+|+.++ +..... ..+..|.|+.|+||..
T Consensus 74 ~D~~~~~~~~~~~---~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 74 QDAMTFNFGELAE---KMGQPLRVFGNLPYNI 102 (252)
T ss_dssp SCGGGCCHHHHHH---HHTSCEEEEEECCTTT
T ss_pred CchhhCCHHHhhc---ccCCceEEEECCCCCc
Confidence 999874 221100 0024589999999974
No 260
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.85 E-value=1.6e-08 Score=87.25 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=67.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-C--CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH------------
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-G--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL------------ 219 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-G--a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l------------ 219 (317)
++.+|||+|||+|.+++.++.+ + ..+|+++|+++.+ . . ++++++++|+.+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--~----------~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--P----------I-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--C----------C-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--C----------C-CCceEEEccccchhhhhhcccccccc
Confidence 5789999999999999988875 3 3589999999832 1 1 24778888876532
Q ss_pred -------HHHhhhcCCCCCccEEEECCCCCCc-----cHH-------HHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 220 -------ERAEQFVGKDGPFDYMSVTPPYTAV-----DYE-------VLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 220 -------~~~~~~~~~~~~fDlV~~dPPy~~~-----~~~-------~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
..... .....+||+|++|++.+.. +.. .+++.+ .++|+|||++++.....
T Consensus 89 ~~~~~~~~~~~~-~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~--~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 89 MNNNSVDYKLKE-ILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFM--EQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ---CHHHHHHHH-HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH--HHHEEEEEEEEEEEECS
T ss_pred ccchhhHHHHHh-hcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHH--HHHccCCCEEEEEEeCC
Confidence 00000 0124689999999765431 111 123333 35899999999866543
No 261
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.81 E-value=3.8e-09 Score=90.62 Aligned_cols=105 Identities=11% Similarity=-0.039 Sum_probs=68.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC---------CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEE-EecHHHHHHH-
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC---------SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH-TVRVETFLER- 221 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga---------~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii-~gD~~~~l~~- 221 (317)
.++.+|||+|||+|.+++.++++ |. .+|+++|+++.+ .+ ++++++ ++|+.+....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------------~~-~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------------PL-EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------------CC-TTCEEECSCCTTSHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------------cC-CCCeEEEeccCCCHHHHH
Confidence 35789999999999999988876 54 689999999842 11 236778 8886543211
Q ss_pred -HhhhcCCCCCccEEEECCCCCC-cc----H-------HHHHHHHHHcCCcCCCeEEEEEeCCCCC
Q 021116 222 -AEQFVGKDGPFDYMSVTPPYTA-VD----Y-------EVLMAQISKSALVGKDSFIVVEYPLRTD 274 (317)
Q Consensus 222 -~~~~~~~~~~fDlV~~dPPy~~-~~----~-------~~~l~~L~~~~lLkpgG~ivv~~~~~~~ 274 (317)
... ...+.+||+|++|++... +. . ...++.+ .++|+|||++++.......
T Consensus 88 ~~~~-~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 88 RILE-VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVT--PDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHHH-HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH--HHHEEEEEEEEEEECCSGG
T ss_pred HHHH-hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHH--HHHhcCCCEEEEEecCCcc
Confidence 000 011357999999985432 11 1 2333333 3589999999998654433
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.79 E-value=2.3e-10 Score=103.53 Aligned_cols=116 Identities=10% Similarity=0.094 Sum_probs=82.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH
Q 021116 136 VKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV 215 (317)
Q Consensus 136 v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~ 215 (317)
+.+.+.+.+.. .++.+|||+|||+|.++..++..+ .+|+++|+|+.++ +.+++|++ + .++++++++|+
T Consensus 17 ~~~~i~~~~~~-------~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~-~~a~~~~~--~-~~~v~~~~~D~ 84 (245)
T 1yub_A 17 VLNQIIKQLNL-------KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLF-NLSSEKLK--L-NTRVTLIHQDI 84 (245)
T ss_dssp THHHHHHHCCC-------CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSS-SSSSCTTT--T-CSEEEECCSCC
T ss_pred HHHHHHHhcCC-------CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHH-HHHHHHhc--c-CCceEEEECCh
Confidence 44455555432 357899999999999999988887 5899999999998 99998876 2 35699999998
Q ss_pred HHHHHHHhhhcCC-CCCccEEEECCCCCCcc--HHHHHHH-------H----H-HcCCcCCCeEEEEEeCC
Q 021116 216 ETFLERAEQFVGK-DGPFDYMSVTPPYTAVD--YEVLMAQ-------I----S-KSALVGKDSFIVVEYPL 271 (317)
Q Consensus 216 ~~~l~~~~~~~~~-~~~fDlV~~dPPy~~~~--~~~~l~~-------L----~-~~~lLkpgG~ivv~~~~ 271 (317)
.++. .. +++| .|++||||.... ...++.. + . ..++|++||.+++....
T Consensus 85 ~~~~-------~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 85 LQFQ-------FPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp TTTT-------CCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred hhcC-------cccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 7642 11 2468 899999997532 1222210 0 1 23578888887765543
No 263
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.78 E-value=1.8e-08 Score=93.68 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=76.8
Q ss_pred CCeEEEECCCcch----HHHHHHHc-C----CCEEEEEeCCHHHHHHHHHHhHHH---------------h--------C
Q 021116 156 PGRWLDLYSGTGS----VGIEAISR-G----CSEVHFVEMDPWVVSNVLIPNLEW---------------T--------G 203 (317)
Q Consensus 156 ~~rVLDlgcGtG~----l~Ieaas~-G----a~~V~aVDin~~al~~~ar~N~~~---------------~--------g 203 (317)
..+|||+|||||. +++.++.. + ..+|+|+|+|+.++ +.|++|+.. + |
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L-~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVL-EKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHH-HHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHH-HHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 5799999999997 66655443 3 13799999999999 999998510 0 0
Q ss_pred -------CCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 204 -------FLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 204 -------l~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+.++++|.++|+.+.. + + ..++||+|++---...- ...++++.+. +.|+|||++++.+...
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~--~---~-~~~~fDlI~crnvliyf~~~~~~~vl~~~~--~~L~pgG~L~lg~sE~- 255 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQ--Y---N-VPGPFDAIFCRNVMIYFDKTTQEDILRRFV--PLLKPDGLLFAGHSEN- 255 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSS--C---C-CCCCEEEEEECSSGGGSCHHHHHHHHHHHG--GGEEEEEEEEECTTCC-
T ss_pred ceeechhhcccCeEEecccCCCC--C---C-cCCCeeEEEECCchHhCCHHHHHHHHHHHH--HHhCCCcEEEEEeccc-
Confidence 1135899999986520 0 0 13579999994211111 1245555554 5899999999976543
Q ss_pred CccccCCCeEEE
Q 021116 274 DMLDTCGCLVKI 285 (317)
Q Consensus 274 ~l~~~~~~~~~~ 285 (317)
+......|+.+
T Consensus 256 -~~~~~~~f~~~ 266 (274)
T 1af7_A 256 -FSNLVREFSLR 266 (274)
T ss_dssp -CTTTCTTEEEE
T ss_pred -ccccccCceEc
Confidence 32233556544
No 264
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.76 E-value=1.3e-09 Score=101.23 Aligned_cols=102 Identities=17% Similarity=0.005 Sum_probs=68.7
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEE--EecHHHHHHHHhhhcCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIH--TVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii--~gD~~~~l~~~~~~~~~~~ 230 (317)
.++.+|||+|||+|.++..++.+ .+|++||+++ ++ ..++++... .....+++++ ++|+.++ .++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~-~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~~ 147 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LG-TSGHEKPRLVETFGWNLITFKSKVDVTKM---------EPF 147 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CC-CTTSCCCCCCCCTTGGGEEEECSCCGGGC---------CCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hh-hhhhhchhhhhhcCCCeEEEeccCcHhhC---------CCC
Confidence 35789999999999999988877 4699999999 54 444332111 1111257888 8998763 246
Q ss_pred CccEEEECCCCCCccH----H---HHHHHHHHcCCcCCCe--EEEEEeC
Q 021116 231 PFDYMSVTPPYTAVDY----E---VLMAQISKSALVGKDS--FIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~----~---~~l~~L~~~~lLkpgG--~ivv~~~ 270 (317)
+||+|++|..+..+.. . ..++.+ .++|+||| .+++...
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~--~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVI--SRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHH--HHHHHHSTTCEEEEEES
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHH--HHHhccCCCcEEEEEeC
Confidence 8999999976322221 1 123333 25899999 8887544
No 265
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.75 E-value=2.1e-08 Score=103.70 Aligned_cols=105 Identities=10% Similarity=-0.016 Sum_probs=72.7
Q ss_pred CCeEEEECCCcchHHHH---HHH-cC----------CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH
Q 021116 156 PGRWLDLYSGTGSVGIE---AIS-RG----------CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER 221 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ie---aas-~G----------a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~ 221 (317)
+..|||+|||+|.+... |++ .| +.+|+|||.|+.++ ..++... .||+.++|+++++|++++.--
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~-~~l~~~~-~Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI-VTLKYMN-VRTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH-HHHHHHH-HHTTTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH-HHHHHHH-hcCCCCeEEEEeCchhhcccc
Confidence 56899999999999643 332 12 23899999999887 5544433 489999999999999988421
Q ss_pred HhhhcCCCCCccEEEECCCCCCc---cHHHHHHHHHHcCCcCCCeEEE
Q 021116 222 AEQFVGKDGPFDYMSVTPPYTAV---DYEVLMAQISKSALVGKDSFIV 266 (317)
Q Consensus 222 ~~~~~~~~~~fDlV~~dPPy~~~---~~~~~l~~L~~~~lLkpgG~iv 266 (317)
.. ....++.|+|+....=..+ ...+.++.. .++|+|||+++
T Consensus 488 ~~--~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v--~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AK--DRGFEQPDIIVSELLGSFGDNELSPECLDGV--TGFLKPTTISI 531 (745)
T ss_dssp HH--HTTCCCCSEEEECCCBTTBGGGSHHHHHHTT--GGGSCTTCEEE
T ss_pred cc--cCCCCcccEEEEeccccccchhccHHHHHHH--HHhCCCCcEEE
Confidence 00 0113689999998751122 234555544 36999999876
No 266
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.73 E-value=1e-08 Score=95.12 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=72.2
Q ss_pred CCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||||||+|.+++..+.. +..+++++|+|+.++ +.+++|+..+|+. .++...|...- ...+.||
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~l-e~a~~~l~~~g~~--~~~~v~D~~~~--------~p~~~~D 200 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLV-GFVDEALTRLNVP--HRTNVADLLED--------RLDEPAD 200 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHH-HHHHHHHHHTTCC--EEEEECCTTTS--------CCCSCCS
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHH-HHHHHHHHhcCCC--ceEEEeeeccc--------CCCCCcc
Confidence 3679999999999999987665 567999999999999 9999999999985 67777886532 1357899
Q ss_pred EEEECCCCCCccHH-----HHHHHHHHcCCcCCCeEEEEE
Q 021116 234 YMSVTPPYTAVDYE-----VLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 234 lV~~dPPy~~~~~~-----~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|++.--+. .++ ..++.+. .|+++|+++..
T Consensus 201 vaL~lkti~--~Le~q~kg~g~~ll~---aL~~~~vvVSf 235 (281)
T 3lcv_B 201 VTLLLKTLP--CLETQQRGSGWEVID---IVNSPNIVVTF 235 (281)
T ss_dssp EEEETTCHH--HHHHHSTTHHHHHHH---HSSCSEEEEEE
T ss_pred hHHHHHHHH--HhhhhhhHHHHHHHH---HhCCCCEEEec
Confidence 999863111 111 2233332 47888876653
No 267
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.71 E-value=1.5e-09 Score=100.23 Aligned_cols=102 Identities=18% Similarity=0.039 Sum_probs=68.0
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEE--EecHHHHHHHHhhhcCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIH--TVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii--~gD~~~~l~~~~~~~~~~~ 230 (317)
.++.+|||+|||+|.++..++.+ .+|++||+++ ++ ..++++... .....+++++ ++|+.++ .++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~-~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~~ 139 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LG-VGGHEVPRITESYGWNIVKFKSRVDIHTL---------PVE 139 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CC-CSSCCCCCCCCBTTGGGEEEECSCCTTTS---------CCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hh-hhhhhhhhhhhccCCCeEEEecccCHhHC---------CCC
Confidence 35789999999999999988877 4699999999 43 333322110 0111147888 8898763 246
Q ss_pred CccEEEECCCCCCccH----H---HHHHHHHHcCCcCCCe--EEEEEeC
Q 021116 231 PFDYMSVTPPYTAVDY----E---VLMAQISKSALVGKDS--FIVVEYP 270 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~----~---~~l~~L~~~~lLkpgG--~ivv~~~ 270 (317)
+||+|++|.....+.. . ..++.+ .++|+||| .+++...
T Consensus 140 ~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~--~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 140 RTDVIMCDVGESSPKWSVESERTIKILELL--EKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHH--HHHHHHCTTCEEEEEES
T ss_pred CCcEEEEeCcccCCccchhHHHHHHHHHHH--HHHhccCCCeEEEEEeC
Confidence 8999999976322221 1 123333 25899999 8887554
No 268
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.71 E-value=1.9e-08 Score=87.77 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=73.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
++.+|||+|||+|.++..+ + .+|+++|+++. +++++.+|+.+. +...++||+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l---~-~~v~~~D~s~~-----------------~~~~~~~d~~~~-------~~~~~~fD~ 118 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI---R-NPVHCFDLASL-----------------DPRVTVCDMAQV-------PLEDESVDV 118 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC---C-SCEEEEESSCS-----------------STTEEESCTTSC-------SCCTTCEEE
T ss_pred CCCeEEEECCcCCHHHHHh---h-ccEEEEeCCCC-----------------CceEEEeccccC-------CCCCCCEeE
Confidence 5689999999999998765 2 46999999985 245678887652 123468999
Q ss_pred EEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCC--C---ccc--cCCCeEEEEEee
Q 021116 235 MSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRT--D---MLD--TCGCLVKIKDRR 289 (317)
Q Consensus 235 V~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~--~---l~~--~~~~~~~~~~r~ 289 (317)
|++...++..+....++.+. ++|+|||++++...... + +.. ...||.++....
T Consensus 119 v~~~~~l~~~~~~~~l~~~~--~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 119 AVFCLSLMGTNIRDFLEEAN--RVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp EEEESCCCSSCHHHHHHHHH--HHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEEC
T ss_pred EEEehhccccCHHHHHHHHH--HhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEec
Confidence 99987665556677777765 48999999998654321 1 111 146788776543
No 269
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.70 E-value=2.3e-08 Score=97.85 Aligned_cols=100 Identities=14% Similarity=0.058 Sum_probs=68.9
Q ss_pred CCCeEEEECCC------cchHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH--HHHHhh
Q 021116 155 RPGRWLDLYSG------TGSVGIEAISR--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQ 224 (317)
Q Consensus 155 ~~~rVLDlgcG------tG~l~Ieaas~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~--l~~~~~ 224 (317)
++.+|||+||| +|..++.+++. ...+|++||+++.+. . . .++++++++|+.+. .....
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-~---------~-~~rI~fv~GDa~dlpf~~~l~- 283 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-V---------D-ELRIRTIQGDQNDAEFLDRIA- 283 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-G---------C-BTTEEEEECCTTCHHHHHHHH-
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-h---------c-CCCcEEEEecccccchhhhhh-
Confidence 57899999999 78888876654 345899999999863 1 1 24699999998763 21110
Q ss_pred hcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 225 FVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 225 ~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
...++||+|++|--....+....++.+. ++|+|||+++++.-
T Consensus 284 --~~d~sFDlVisdgsH~~~d~~~aL~el~--rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 284 --RRYGPFDIVIDDGSHINAHVRTSFAALF--PHVRPGGLYVIEDM 325 (419)
T ss_dssp --HHHCCEEEEEECSCCCHHHHHHHHHHHG--GGEEEEEEEEEECG
T ss_pred --cccCCccEEEECCcccchhHHHHHHHHH--HhcCCCeEEEEEec
Confidence 0127899999985322223344455543 69999999999744
No 270
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.65 E-value=2.6e-08 Score=94.36 Aligned_cols=100 Identities=10% Similarity=-0.007 Sum_probs=72.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.++..+++.. ..+++++|+ +.++ . +++++..+..++++++.+|+.+.+ +.||
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~--~~~~~~~~~~~~v~~~~~d~~~~~----------p~~D 249 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVV-A--RHRLDAPDVAGRWKVVEGDFLREV----------PHAD 249 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHH-T--TCCCCCGGGTTSEEEEECCTTTCC----------CCCS
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHh-h--cccccccCCCCCeEEEecCCCCCC----------CCCc
Confidence 46899999999999999887754 347999999 5555 4 556655667778999999986321 2899
Q ss_pred EEEECCCCC-CccH--HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AVDY--EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~~--~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.--.+ ..+. ..+++.+. +.|+|||++++...
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~--~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCR--RVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HTCCTTCEEEEEEC
T ss_pred EEEEehhccCCCHHHHHHHHHHHH--HhcCCCCEEEEEEe
Confidence 999864433 2222 35566554 58999999988654
No 271
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.64 E-value=9.3e-09 Score=96.77 Aligned_cols=103 Identities=12% Similarity=0.064 Sum_probs=67.9
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEM----DPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDi----n~~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~~~~ 228 (317)
.++.+|||+|||+|.++..++.+ .+|++||+ ++..+ +.+. .+..+. ++++++++ |+.++ .
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~-~~~~--~~~~~~-~~v~~~~~~D~~~l---------~ 145 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHE-EPIP--MSTYGW-NLVRLQSGVDVFFI---------P 145 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSC-CCCC--CCSTTG-GGEEEECSCCTTTS---------C
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHH-HHHH--hhhcCC-CCeEEEeccccccC---------C
Confidence 35789999999999999988877 36999999 45333 2211 112222 45889998 87653 1
Q ss_pred CCCccEEEECCCCCCcc----HHHHHHHHHH-cCCcCCCeEEEEEeCC
Q 021116 229 DGPFDYMSVTPPYTAVD----YEVLMAQISK-SALVGKDSFIVVEYPL 271 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~----~~~~l~~L~~-~~lLkpgG~ivv~~~~ 271 (317)
..+||+|++|.++..+. ....+..+.. .++|+|||.+++....
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 36899999997654221 1212233321 2689999999986543
No 272
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.58 E-value=7.3e-08 Score=88.41 Aligned_cols=126 Identities=14% Similarity=0.101 Sum_probs=83.6
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
...+|||+|||+|.+++..+ +..+++++|+|+.++ +.+++|+..+|.. .++..+|..... ..++||+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i-~~ar~~~~~~g~~--~~~~v~D~~~~~--------~~~~~Dv 171 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLG-DVITPFAREKDWD--FTFALQDVLCAP--------PAEAGDL 171 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHH-HHHHHHHHHTTCE--EEEEECCTTTSC--------CCCBCSE
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHH-HHHHHHHHhcCCC--ceEEEeecccCC--------CCCCcch
Confidence 46799999999999999766 667899999999999 9999999998853 678888876432 2468999
Q ss_pred EEECCCCCCccH-----HHHHHHHHHcCCcCCCeEEEEEeCCCCC------cc---------ccCCCeEEEEEeecCceE
Q 021116 235 MSVTPPYTAVDY-----EVLMAQISKSALVGKDSFIVVEYPLRTD------ML---------DTCGCLVKIKDRRFGRTH 294 (317)
Q Consensus 235 V~~dPPy~~~~~-----~~~l~~L~~~~lLkpgG~ivv~~~~~~~------l~---------~~~~~~~~~~~r~yG~~~ 294 (317)
|++.=-++ .+ ...++.+. .|+++++++. .+.++- +. ...+...++++..+|..-
T Consensus 172 vLllk~lh--~LE~q~~~~~~~ll~---aL~~~~vvVs-fPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~nEl 245 (253)
T 3frh_A 172 ALIFKLLP--LLEREQAGSAMALLQ---SLNTPRMAVS-FPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTEL 245 (253)
T ss_dssp EEEESCHH--HHHHHSTTHHHHHHH---HCBCSEEEEE-EECC-----------CHHHHHHHHSCTTEEEEEEEEETTEE
T ss_pred HHHHHHHH--HhhhhchhhHHHHHH---HhcCCCEEEE-cChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecCceE
Confidence 98852111 11 11222232 4788866654 442211 11 113456666777777666
Q ss_pred EEEEe
Q 021116 295 LAIYG 299 (317)
Q Consensus 295 l~~~~ 299 (317)
+.+.+
T Consensus 246 ~~~i~ 250 (253)
T 3frh_A 246 IYLIK 250 (253)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55543
No 273
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.55 E-value=3.4e-08 Score=90.96 Aligned_cols=133 Identities=10% Similarity=-0.094 Sum_probs=84.5
Q ss_pred CCCeEEEECCCcchHHHHHHHc-------CC------CEEEEEeCCH---HHH----------HHHHHHhHHHh------
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-------GC------SEVHFVEMDP---WVV----------SNVLIPNLEWT------ 202 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-------Ga------~~V~aVDin~---~al----------~~~ar~N~~~~------ 202 (317)
+..+|||+|+|+|...+.++.. +. .+++++|.+| +.+ .+.++++++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988765432 21 3799999987 333 13667776641
Q ss_pred ----CCC---CceEEEEecHHHHHHHHhhhcCCCCCccEEEECC--CCCCc--cHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 203 ----GFL---DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTP--PYTAV--DYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 203 ----gl~---~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dP--Py~~~--~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
.++ .+++++.+|+.+.+..... .....||+||+|+ |-... ...+.++.+. ++|+|||+++..+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~--~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~--~~L~pGG~l~tysaa 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDD--SLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMA--RLARPGGTLATFTSA 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCG--GGTTCEEEEEECSSCTTTCGGGCCHHHHHHHH--HHEEEEEEEEESCCB
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccc--ccCCeEEEEEECCCCcccChhhcCHHHHHHHH--HHcCCCcEEEEEeCC
Confidence 121 3578999999987654310 0012799999997 32111 2467787776 489999999863322
Q ss_pred CCCcc--ccCCCeEEEEEeecCc
Q 021116 272 RTDML--DTCGCLVKIKDRRFGR 292 (317)
Q Consensus 272 ~~~l~--~~~~~~~~~~~r~yG~ 292 (317)
..+. ...+||.+.+...+|.
T Consensus 216 -~~vrr~L~~aGF~v~~~~g~~~ 237 (257)
T 2qy6_A 216 -GFVRRGLQEAGFTMQKRKGFGR 237 (257)
T ss_dssp -HHHHHHHHHHTEEEEEECCSTT
T ss_pred -HHHHHHHHHCCCEEEeCCCCCC
Confidence 1211 1246788776666663
No 274
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.46 E-value=1.4e-06 Score=81.09 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=72.1
Q ss_pred CCeEEEECCCcch--HHHHHHH--cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 156 PGRWLDLYSGTGS--VGIEAIS--RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 156 ~~rVLDlgcGtG~--l~Ieaas--~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
..+|||||||+++ ...+.+. ....+|++||.|+.++ +.|++++...+ ..+++++++|+.+....+.. +.....
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mL-a~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~-~~~~~~ 155 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVL-TLSQGLLASTP-EGRTAYVEADMLDPASILDA-PELRDT 155 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHH-HTTHHHHCCCS-SSEEEEEECCTTCHHHHHTC-HHHHTT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHH-HHHHHHhccCC-CCcEEEEEecccChhhhhcc-cccccc
Confidence 3689999999733 3334333 2335899999999999 99998886543 24689999999876321100 000133
Q ss_pred cc-----EEEECCCCCC-cc---HHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 232 FD-----YMSVTPPYTA-VD---YEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 232 fD-----lV~~dPPy~~-~~---~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
|| .|+++--.+. .+ ...++..+. +.|+|||++++.+...
T Consensus 156 ~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~--~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFVLDEDDAVGIVRRLL--EPLPSGSYLAMSIGTA 203 (277)
T ss_dssp CCTTSCCEEEEESCGGGSCGGGCHHHHHHHHH--TTSCTTCEEEEEEECC
T ss_pred cCcCCcchHHhhhhHhcCCchhhHHHHHHHHH--HhCCCCcEEEEEeccC
Confidence 54 4666654332 12 245676665 5899999999986543
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.44 E-value=5.2e-07 Score=84.74 Aligned_cols=108 Identities=14% Similarity=0.108 Sum_probs=82.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHh--C-C-CCceEEEEecHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWT--G-F-LDVSSIHTVRVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~--g-l-~~~v~ii~gD~~~~l~~~~~~~~~ 228 (317)
...++||=+|-|.|.+.-++++. +..+|+.||+|+..+ +.+++-+... + + +.+++++.+|+..++.. .
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv-~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~------~ 154 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVV-SFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------T 154 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHH-HHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC------S
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHH-HHHHhcCccccccccCCCcEEEEechHHHHHhh------c
Confidence 35789999999999999998874 567899999999999 9999876432 1 1 35799999999998753 3
Q ss_pred CCCccEEEECCCCCCc----cH-HHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 229 DGPFDYMSVTPPYTAV----DY-EVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~----~~-~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.++||+||+|.+-..+ .+ .+.++.+. +.|+|||++++...
T Consensus 155 ~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~--~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 155 SQTFDVIISDCTDPIGPGESLFTSAFYEGCK--RCLNPGGIFVAQNG 199 (294)
T ss_dssp SCCEEEEEESCCCCCCTTCCSSCCHHHHHHH--HTEEEEEEEEEEEE
T ss_pred cccCCEEEEeCCCcCCCchhhcCHHHHHHHH--HHhCCCCEEEEecC
Confidence 5789999998642211 11 34555554 48999999998654
No 276
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.40 E-value=4.3e-07 Score=85.09 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=62.4
Q ss_pred CCCCeEEEECCCc------chHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEE-EEecHHHHHHHHhhh
Q 021116 154 LRPGRWLDLYSGT------GSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSI-HTVRVETFLERAEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGt------G~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~i-i~gD~~~~l~~~~~~ 225 (317)
.++.+|||+|||+ |+ .+.+...+ ..+|+++|+++. + +++++ +++|+.+..
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~-v--------------~~v~~~i~gD~~~~~------ 119 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF-V--------------SDADSTLIGDCATVH------ 119 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC-B--------------CSSSEEEESCGGGCC------
T ss_pred CCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC-C--------------CCCEEEEECccccCC------
Confidence 3578999999944 76 33333344 358999999986 1 13678 999987641
Q ss_pred cCCCCCccEEEECCCCCC------------ccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 226 VGKDGPFDYMSVTPPYTA------------VDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 226 ~~~~~~fDlV~~dPPy~~------------~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
..++||+|++|++... ..++..++.+. ++|+|||++++....
T Consensus 120 --~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~--r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 120 --TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIK--QKLALGGSIAVKITE 173 (290)
T ss_dssp --CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHH--HHEEEEEEEEEEECS
T ss_pred --ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHH--HhcCCCcEEEEEEec
Confidence 1257999999964321 11345555554 589999999996643
No 277
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.40 E-value=2.5e-07 Score=87.51 Aligned_cols=95 Identities=13% Similarity=0.000 Sum_probs=68.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||+|||+|.++..++++. ..+++++|+ +.++ +.++++ .+++++.+|+.+.+ +.||
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~-------~~v~~~~~d~~~~~----------p~~D 248 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVV-ENLSGS-------NNLTYVGGDMFTSI----------PNAD 248 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCB-------TTEEEEECCTTTCC----------CCCS
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHH-hhcccC-------CCcEEEeccccCCC----------CCcc
Confidence 46899999999999999887653 347999999 9998 777642 23899999986421 3499
Q ss_pred EEEECCCCC-CccHH--HHHHHHHHcCCcCC---CeEEEEEeC
Q 021116 234 YMSVTPPYT-AVDYE--VLMAQISKSALVGK---DSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~~~--~~l~~L~~~~lLkp---gG~ivv~~~ 270 (317)
+|++.-..+ ..+.+ .+++.+. +.|+| ||++++...
T Consensus 249 ~v~~~~~lh~~~d~~~~~~l~~~~--~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 249 AVLLKYILHNWTDKDCLRILKKCK--EAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHHSGGGCCCEEEEEEC
T ss_pred EEEeehhhccCCHHHHHHHHHHHH--HhCCCCCCCcEEEEEEe
Confidence 999864433 22222 5555554 47999 999887653
No 278
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.38 E-value=2.2e-07 Score=88.68 Aligned_cols=94 Identities=12% Similarity=0.016 Sum_probs=68.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++.+|||+|||+|.++..++.++ ..+++++|+ +.++ +.++++ .+++++.+|+.+.+ +.||
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~-------~~v~~~~~d~~~~~----------~~~D 269 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVI-ENAPPL-------SGIEHVGGDMFASV----------PQGD 269 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCC-------TTEEEEECCTTTCC----------CCEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHH-Hhhhhc-------CCCEEEeCCcccCC----------CCCC
Confidence 46899999999999999888765 347899999 8887 776542 34899999986521 2399
Q ss_pred EEEECCCCCC-ccHH--HHHHHHHHcCCcCCCeEEEEEe
Q 021116 234 YMSVTPPYTA-VDYE--VLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~~-~~~~--~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|++.-..+. .+.+ .+++.+. +.|+|||++++..
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~--~~L~pgG~l~i~e 306 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCH--KALSPNGKVIIVE 306 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHH--HHEEEEEEEEEEE
T ss_pred EEEEecccccCCHHHHHHHHHHHH--HhcCCCCEEEEEE
Confidence 9998644322 2222 5555554 5899999998764
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.37 E-value=1.9e-06 Score=73.15 Aligned_cols=130 Identities=14% Similarity=0.072 Sum_probs=81.5
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcc-hHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCce
Q 021116 131 PMMEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTG-SVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVS 208 (317)
Q Consensus 131 pt~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG-~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v 208 (317)
|....+.+.+...+.... ..+.+|||+|||+| .++..++. .|. .|+++|+|+.++ +
T Consensus 16 ~~~~~m~e~LaeYI~~~~-----~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av-~--------------- 73 (153)
T 2k4m_A 16 PRGSHMWNDLAVYIIRCS-----GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHG-G--------------- 73 (153)
T ss_dssp CCCCHHHHHHHHHHHHHS-----CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSST-T---------------
T ss_pred cchhhHHHHHHHHHHhcC-----CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCcccc-c---------------
Confidence 333334666777765431 34679999999999 59988876 786 599999999998 5
Q ss_pred EEEEecHHHHHHHHhhhcCCCCCccEE-EECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCCCCccccCCCeEEEEE
Q 021116 209 SIHTVRVETFLERAEQFVGKDGPFDYM-SVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLRTDMLDTCGCLVKIKD 287 (317)
Q Consensus 209 ~ii~gD~~~~l~~~~~~~~~~~~fDlV-~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~~~~~~~~~~~~ 287 (317)
+++.|+++..... -+.||+| -++||.. ....+++ ++. +-|.-+++..-..+... ..+.+ +-
T Consensus 74 -~v~dDiF~P~~~~------Y~~~DLIYsirPP~E--l~~~i~~-lA~----~v~adliI~pL~~E~~~-~~~~~---kl 135 (153)
T 2k4m_A 74 -IVRDDITSPRMEI------YRGAALIYSIRPPAE--IHSSLMR-VAD----AVGARLIIKPLTGEDIV-TERKM---KL 135 (153)
T ss_dssp -EECCCSSSCCHHH------HTTEEEEEEESCCTT--THHHHHH-HHH----HHTCEEEEECBTTBCCC-CCTTC---EE
T ss_pred -eEEccCCCCcccc------cCCcCEEEEcCCCHH--HHHHHHH-HHH----HcCCCEEEEcCCCCcCC-CCCce---EE
Confidence 5667776543222 1479999 6899964 2333333 332 33566666554444432 11224 34
Q ss_pred eecCceEEEEEee
Q 021116 288 RRFGRTHLAIYGP 300 (317)
Q Consensus 288 r~yG~~~l~~~~p 300 (317)
..|....+.+|+.
T Consensus 136 ~ny~g~~fY~~~~ 148 (153)
T 2k4m_A 136 VNYGRTYFYEYIA 148 (153)
T ss_dssp EEETTEEEEEEEC
T ss_pred EecCCceEEEEeh
Confidence 5677666666653
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.36 E-value=1.8e-06 Score=80.64 Aligned_cols=106 Identities=10% Similarity=0.016 Sum_probs=77.7
Q ss_pred CCCeEEEECCCcchHHHHHHHc----C--CCEEEEEeCCH--------------------------HHHHHHHHHhHHHh
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR----G--CSEVHFVEMDP--------------------------WVVSNVLIPNLEWT 202 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~----G--a~~V~aVDin~--------------------------~al~~~ar~N~~~~ 202 (317)
..++||++|+..|..++.++.. | ..+|+++|... ..+ +.+++|++..
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~-~~ar~n~~~~ 184 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSE-EEVRRNFRNY 184 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCH-HHHHHHHHHT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHH-HHHHHHHHHc
Confidence 4679999999999988764321 1 35799999631 135 7799999999
Q ss_pred CCC-CceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc-cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 203 GFL-DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 203 gl~-~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
|+. ++++++.||+.+.+... ..++||+|++|. .+. .+...++.+. ++|++||+|++..-
T Consensus 185 gl~~~~I~li~Gda~etL~~~-----~~~~~d~vfIDa--D~y~~~~~~Le~~~--p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTA-----PIDTLAVLRMDG--DLYESTWDTLTNLY--PKVSVGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTC-----CCCCEEEEEECC--CSHHHHHHHHHHHG--GGEEEEEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhC-----CCCCEEEEEEcC--CccccHHHHHHHHH--hhcCCCEEEEEcCC
Confidence 994 88999999998876432 246899999995 321 2334555554 58999999998653
No 281
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.35 E-value=1e-06 Score=83.88 Aligned_cols=102 Identities=15% Similarity=0.045 Sum_probs=72.0
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|+|+|||+|.++++++++. ..+++..|. |.++ +.|+++++..+ .++++++.+|+++. ..+.+|
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~-~~a~~~~~~~~-~~rv~~~~gD~~~~---------~~~~~D 246 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVV-WTAKQHFSFQE-EEQIDFQEGDFFKD---------PLPEAD 246 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHH-HHHHHHSCC---CCSEEEEESCTTTS---------CCCCCS
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHH-HHHHHhhhhcc-cCceeeecCccccC---------CCCCce
Confidence 35799999999999999988764 346888887 7888 99999887555 57899999997642 125689
Q ss_pred EEEECCCCC-Ccc--HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AVD--YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~~--~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++---.+ +.+ ...+++.+. +.|+|||.+++...
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~--~al~pgg~lli~e~ 284 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIY--HTCKPGGGILVIES 284 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHH--HHCCTTCEEEEEEC
T ss_pred EEEeeeecccCCHHHHHHHHHHHH--hhCCCCCEEEEEEe
Confidence 999842211 111 234455554 47999998887654
No 282
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.34 E-value=5.4e-07 Score=86.18 Aligned_cols=95 Identities=12% Similarity=-0.009 Sum_probs=67.7
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||+|||+|.+++.++++. ..+++++|+ +.++ +.++++ ++++++.+|+.+.+ ... |
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~-------~~v~~~~~d~~~~~---------p~~-D 263 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVI-QDAPAF-------SGVEHLGGDMFDGV---------PKG-D 263 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCC-------TTEEEEECCTTTCC---------CCC-S
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHH-Hhhhhc-------CCCEEEecCCCCCC---------CCC-C
Confidence 46899999999999999887753 347999999 8887 766542 45999999987521 122 9
Q ss_pred EEEECCCCCCcc---HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTAVD---YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~~~---~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.-..+... ...+++.+. +.|+|||++++...
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~--~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCY--AALPDHGKVIVAEY 301 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHH--HHSCTTCEEEEEEC
T ss_pred EEEEechhhcCCHHHHHHHHHHHH--HHcCCCCEEEEEEe
Confidence 999864433212 234455554 47999999887654
No 283
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.34 E-value=2.1e-06 Score=80.12 Aligned_cols=80 Identities=14% Similarity=0.069 Sum_probs=64.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++..++|.+||.|..+.++++++ .+|+++|.|+.++ +.|++ ++. +++++++++..++...+... ..+++|
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai-~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~--g~~~vD 91 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAV-ARAKG-LHL----PGLTVVQGNFRHLKRHLAAL--GVERVD 91 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHH-HHHHH-TCC----TTEEEEESCGGGHHHHHHHT--TCSCEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHH-HHHHh-hcc----CCEEEEECCcchHHHHHHHc--CCCCcC
Confidence 357899999999999999988884 4899999999999 99887 643 47999999988774433211 125799
Q ss_pred EEEECCCCC
Q 021116 234 YMSVTPPYT 242 (317)
Q Consensus 234 lV~~dPPy~ 242 (317)
.|++|+.+.
T Consensus 92 gIL~DLGvS 100 (285)
T 1wg8_A 92 GILADLGVS 100 (285)
T ss_dssp EEEEECSCC
T ss_pred EEEeCCccc
Confidence 999999875
No 284
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.31 E-value=2.2e-06 Score=79.68 Aligned_cols=61 Identities=18% Similarity=0.131 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl 204 (317)
..+.+.+..... .++..|||+|||||+++++++..|. +++++|+++.++ +.|++|++...-
T Consensus 222 ~~l~~~~i~~~~--------~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~-~~a~~r~~~~~~ 282 (297)
T 2zig_A 222 LELAERLVRMFS--------FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYA-QLAKERFAREVP 282 (297)
T ss_dssp HHHHHHHHHHHC--------CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHST
T ss_pred HHHHHHHHHHhC--------CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHH-HHHHHHHHHhcc
Confidence 445555544442 3688999999999999999998885 799999999999 999999987643
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.30 E-value=2.5e-06 Score=82.70 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=80.5
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh-C--C----CCceEEEEecHHHHHHHHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT-G--F----LDVSSIHTVRVETFLERAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~-g--l----~~~v~ii~gD~~~~l~~~~~~~~ 227 (317)
+.++||=+|-|.|...-++++....+|+.||+|+..+ +.+++-+... + + .++++++.+|+.++++....
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VV-e~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~--- 280 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK--- 280 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH---
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHH-HHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh---
Confidence 4689999999999999999886678999999999999 9999864321 1 1 14589999999999875421
Q ss_pred CCCCccEEEECCC---CCCc-------c-HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPP---YTAV-------D-YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPP---y~~~-------~-~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
...+||+||+|.+ .... . ..+.++.+. +.|+|||++++...
T Consensus 281 ~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~--~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 281 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSM--KVLKQDGKYFTQGN 332 (381)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHH--HTEEEEEEEEEEEE
T ss_pred ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHH--HhcCCCCEEEEecC
Confidence 1467999999843 1111 1 134444444 48999999998644
No 286
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.30 E-value=6.6e-07 Score=84.97 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=59.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
.+.+++|||||+|.+++.+.+.|+..|.++|+|+.++ +..+.|.... . ++|+.++.... -..+|+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~-~t~~~N~~~~-----~---~~Di~~~~~~~------~~~~D~ 74 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQ-EVYEMNFGEK-----P---EGDITQVNEKT------IPDHDI 74 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHH-HHHHHHHSCC-----C---BSCGGGSCGGG------SCCCSE
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHH-HHHHHHcCCC-----C---cCCHHHcCHhh------CCCCCE
Confidence 4578999999999999999899998899999999998 9999996421 1 57887654221 146999
Q ss_pred EEECCCCC
Q 021116 235 MSVTPPYT 242 (317)
Q Consensus 235 V~~dPPy~ 242 (317)
|+.+||+.
T Consensus 75 l~~gpPCQ 82 (327)
T 2c7p_A 75 LCAGFPCQ 82 (327)
T ss_dssp EEEECCCT
T ss_pred EEECCCCC
Confidence 99999985
No 287
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.30 E-value=4.7e-07 Score=86.35 Aligned_cols=73 Identities=21% Similarity=0.285 Sum_probs=57.7
Q ss_pred CeEEEECCCcchHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH-HhhhcCCCCCcc
Q 021116 157 GRWLDLYSGTGSVGIEAISRG--CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER-AEQFVGKDGPFD 233 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas~G--a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~-~~~~~~~~~~fD 233 (317)
.+|+|||||+|.+++.+.+.| +..|.++|+|+.++ +..+.|... ..++++|+.++... +. ...+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~-~~~~~N~~~------~~~~~~Di~~~~~~~~~-----~~~~D 70 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVAN-EVYKYNFPH------TQLLAKTIEGITLEEFD-----RLSFD 70 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHH-HHHHHHCTT------SCEECSCGGGCCHHHHH-----HHCCS
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHH-HHHHHhccc------cccccCCHHHccHhHcC-----cCCcC
Confidence 479999999999999988888 55799999999998 999999642 33678888876422 11 12699
Q ss_pred EEEECCCC
Q 021116 234 YMSVTPPY 241 (317)
Q Consensus 234 lV~~dPPy 241 (317)
+|+.+||+
T Consensus 71 ~l~~gpPC 78 (343)
T 1g55_A 71 MILMSPPC 78 (343)
T ss_dssp EEEECCC-
T ss_pred EEEEcCCC
Confidence 99999995
No 288
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.25 E-value=1.9e-06 Score=83.27 Aligned_cols=79 Identities=25% Similarity=0.302 Sum_probs=60.4
Q ss_pred CeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH-HhhhcCCCCCccEE
Q 021116 157 GRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER-AEQFVGKDGPFDYM 235 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~-~~~~~~~~~~fDlV 235 (317)
-+++|||||+|.+++.+.+.|...|.++|+|+.++ +..+.|.. ...++++|+.++... ..........+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~-~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAI-NTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHH-HHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHH-HHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 47999999999999998888988889999999998 99988853 256788898765321 10000123679999
Q ss_pred EECCCCC
Q 021116 236 SVTPPYT 242 (317)
Q Consensus 236 ~~dPPy~ 242 (317)
+.+||..
T Consensus 76 ~ggpPCQ 82 (376)
T 3g7u_A 76 IGGPPCQ 82 (376)
T ss_dssp EECCCCC
T ss_pred EecCCCC
Confidence 9999964
No 289
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.23 E-value=2.4e-06 Score=77.96 Aligned_cols=61 Identities=18% Similarity=0.059 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC
Q 021116 134 EVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF 204 (317)
Q Consensus 134 ~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl 204 (317)
..+.+.+..... .++..|||+|||||+.+++|...|. +++++|+++.++ +.+++|++.+++
T Consensus 199 ~~l~~~~i~~~~--------~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~-~~~~~r~~~~~~ 259 (260)
T 1g60_A 199 RDLIERIIRASS--------NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYV-NQANFVLNQLEI 259 (260)
T ss_dssp HHHHHHHHHHHC--------CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHC---
T ss_pred HHHHHHHHHHhC--------CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHH-HHHHHHHHhccC
Confidence 455555555442 3688999999999999999998875 799999999998 999999987764
No 290
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.22 E-value=1.2e-06 Score=83.73 Aligned_cols=95 Identities=9% Similarity=-0.032 Sum_probs=67.2
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||+|||+|.++..++++. ..+++++|+ +.++ +.++++ ++++++.+|+++.+ . .. |
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~-------~~v~~~~~D~~~~~--------p-~~-D 261 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVI-SEAPQF-------PGVTHVGGDMFKEV--------P-SG-D 261 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-TTCCCC-------TTEEEEECCTTTCC--------C-CC-S
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHH-Hhhhhc-------CCeEEEeCCcCCCC--------C-CC-C
Confidence 46899999999999999887753 347999999 8887 666532 46999999987521 1 22 9
Q ss_pred EEEECCCCC-Cc--cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYT-AV--DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~-~~--~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.--.+ .. ....+++.+. +.|+|||++++...
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~--~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCY--DALPAHGKVVLVQC 299 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHSCTTCEEEEEEC
T ss_pred EEEehHHhccCCHHHHHHHHHHHH--HHcCCCCEEEEEEe
Confidence 999854322 11 1234455554 47999999987654
No 291
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.20 E-value=1.2e-06 Score=82.98 Aligned_cols=94 Identities=13% Similarity=-0.025 Sum_probs=67.9
Q ss_pred CCCeEEEECCCcchHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRG-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
...+|||+|||+|.++..++++. ..+++++|+ +.++ +.+++ .. +++++.+|+.+. -+.||
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~------~~-~v~~~~~d~~~~----------~~~~D 253 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVV-GNLTG------NE-NLNFVGGDMFKS----------IPSAD 253 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHH-SSCCC------CS-SEEEEECCTTTC----------CCCCS
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHH-hhccc------CC-CcEEEeCccCCC----------CCCce
Confidence 45799999999999999888764 347999999 7887 66653 22 389999998651 13599
Q ss_pred EEEECCCCC-CccHH--HHHHHHHHcCCcCC---CeEEEEEe
Q 021116 234 YMSVTPPYT-AVDYE--VLMAQISKSALVGK---DSFIVVEY 269 (317)
Q Consensus 234 lV~~dPPy~-~~~~~--~~l~~L~~~~lLkp---gG~ivv~~ 269 (317)
+|++.-..+ ..+.+ .+++.+. +.|+| ||++++..
T Consensus 254 ~v~~~~vlh~~~d~~~~~~l~~~~--~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 254 AVLLKWVLHDWNDEQSLKILKNSK--EAISHKGKDGKVIIID 293 (358)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHH--HHTGGGGGGCEEEEEE
T ss_pred EEEEcccccCCCHHHHHHHHHHHH--HhCCCCCCCcEEEEEE
Confidence 999875443 22322 5555554 47999 99888754
No 292
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.17 E-value=1.3e-06 Score=73.90 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=65.6
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.++.+|||++||+ | .+|+++.++ +.|+++... +++++++|+.+.... ...+++||
T Consensus 11 ~~g~~vL~~~~g~--------------v-~vD~s~~ml-~~a~~~~~~-----~~~~~~~d~~~~~~~----~~~~~~fD 65 (176)
T 2ld4_A 11 SAGQFVAVVWDKS--------------S-PVEALKGLV-DKLQALTGN-----EGRVSVENIKQLLQS----AHKESSFD 65 (176)
T ss_dssp CTTSEEEEEECTT--------------S-CHHHHHHHH-HHHHHHTTT-----TSEEEEEEGGGGGGG----CCCSSCEE
T ss_pred CCCCEEEEecCCc--------------e-eeeCCHHHH-HHHHHhccc-----CcEEEEechhcCccc----cCCCCCEe
Confidence 3689999999986 2 389999999 999887532 378999998865310 01357899
Q ss_pred EEEECCCCCC--ccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 234 YMSVTPPYTA--VDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 234 lV~~dPPy~~--~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|++.-..+. .+....++.+. ++|+|||++++.++
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~--r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIA--RILRPGGCLFLKEP 102 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHH--HHEEEEEEEEEEEE
T ss_pred EEEECChhhhcccCHHHHHHHHH--HHCCCCEEEEEEcc
Confidence 9998543322 35567777775 58999999999755
No 293
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.83 E-value=4.2e-05 Score=71.61 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=59.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCE--EEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSE--VHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~--V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
..-+++|||||.|.+++.+.+.|... |.++|+|+.++ +..+.|.. + ..++.+|+.++.... ++ ..+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~-~ty~~N~~-----~-~~~~~~DI~~i~~~~--i~-~~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSI-TVGMVRHQ-----G-KIMYVGDVRSVTQKH--IQ-EWGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHH-HHHHHHTT-----T-CEEEECCGGGCCHHH--HH-HTCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHH-HHHHHhCC-----C-CceeCCChHHccHHH--hc-ccCCc
Confidence 46689999999999999888888875 79999999998 88887742 2 357889988764321 00 01469
Q ss_pred cEEEECCCCC
Q 021116 233 DYMSVTPPYT 242 (317)
Q Consensus 233 DlV~~dPPy~ 242 (317)
|+++.+||+.
T Consensus 85 Dll~ggpPCQ 94 (295)
T 2qrv_A 85 DLVIGGSPCN 94 (295)
T ss_dssp SEEEECCCCG
T ss_pred CEEEecCCCc
Confidence 9999999974
No 294
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.70 E-value=2.5e-05 Score=72.96 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=56.9
Q ss_pred eEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEE
Q 021116 158 RWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSV 237 (317)
Q Consensus 158 rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~ 237 (317)
+|+|||||.|.+.+-+-..|..-|.++|+|+.++ +.-+.|.. .+++.+|+.++.... -+..|+++.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~-~ty~~N~~-------~~~~~~DI~~i~~~~------~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIW-KTYESNHS-------AKLIKGDISKISSDE------FPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTH-HHHHHHCC-------SEEEESCGGGCCGGG------SCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHH-HHHHHHCC-------CCcccCChhhCCHhh------CCcccEEEe
Confidence 6999999999999877777887889999999998 88887741 257889988753221 257899999
Q ss_pred CCCCC
Q 021116 238 TPPYT 242 (317)
Q Consensus 238 dPPy~ 242 (317)
.||..
T Consensus 68 gpPCQ 72 (331)
T 3ubt_Y 68 GPPSQ 72 (331)
T ss_dssp CCCGG
T ss_pred cCCCC
Confidence 99964
No 295
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.65 E-value=7.8e-05 Score=74.36 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=59.4
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH----------Hhhh
Q 021116 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER----------AEQF 225 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~----------~~~~ 225 (317)
.-+++|||||.|.+++-+-..|...|.++|+|+.++ +.-+.|.... ....++++|+.++... ...+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~-~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAV-RTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHH-HHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHH-HHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhh
Confidence 458999999999999877777877799999999998 8888875211 1235678998876410 0000
Q ss_pred cCCCCCccEEEECCCCC
Q 021116 226 VGKDGPFDYMSVTPPYT 242 (317)
Q Consensus 226 ~~~~~~fDlV~~dPPy~ 242 (317)
....+.+|+++..||..
T Consensus 164 ~~~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQ 180 (482)
T ss_dssp HHHSCCCSEEEEECCCC
T ss_pred hhcCCCCCEEEecCCCc
Confidence 00125689999999964
No 296
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.62 E-value=5.6e-05 Score=71.89 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=56.7
Q ss_pred CeEEEECCCcchHHHHHHHcCC--CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 157 GRWLDLYSGTGSVGIEAISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas~Ga--~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
-+++|||||.|.+++.+...|. ..|.++|+|+.++ +..+.|... ..++.+|+.++..... ....+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~-~ty~~N~~~------~~~~~~DI~~~~~~~~----~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVAN-SVYKHNFPE------TNLLNRNIQQLTPQVI----KKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHH-HHHHHHCTT------SCEECCCGGGCCHHHH----HHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHH-HHHHHhCCC------CceeccccccCCHHHh----ccCCCCE
Confidence 3799999999999988777786 5689999999998 888888632 2356788876532211 0136999
Q ss_pred EEECCCCC
Q 021116 235 MSVTPPYT 242 (317)
Q Consensus 235 V~~dPPy~ 242 (317)
++..||..
T Consensus 73 l~ggpPCQ 80 (333)
T 4h0n_A 73 ILMSPPCQ 80 (333)
T ss_dssp EEECCCCC
T ss_pred EEecCCCc
Confidence 99999974
No 297
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.62 E-value=3.7e-05 Score=72.49 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=51.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL 219 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l 219 (317)
.+++.|||+|||+|+.+++|...|. +.+++|+++..+ +.++++++..+.. ...++.|+.++.
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~-~~~~~r~~~~~~~--~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYV-AASAFRFLDNNIS--EEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHH-HHHHGGGSCSCSC--HHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHH-HHHHHHHHhcccc--hHHHHHHHHHHH
Confidence 4688999999999999999988875 799999999998 9999999877653 445566666554
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.60 E-value=0.00027 Score=67.85 Aligned_cols=81 Identities=16% Similarity=0.075 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEE
Q 021116 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIH 211 (317)
Q Consensus 133 ~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii 211 (317)
...+.+.+.+.+....... +.++..|||+|.|.|.++..++.+ .+++|++||+|+..+ ..+++.. . .++++++
T Consensus 37 d~~i~~~Iv~~~~l~~~~~-~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~-~~L~~~~-~---~~~l~ii 110 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYK-HPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY-KFLNAKF-E---GSPLQIL 110 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCC-CTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH-HHHHHHT-T---TSSCEEE
T ss_pred CHHHHHHHHHhccCCcccC-cCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH-HHHHHhc-c---CCCEEEE
Confidence 3557777777765421000 013589999999999999988875 356899999999998 8887765 2 2569999
Q ss_pred EecHHHHH
Q 021116 212 TVRVETFL 219 (317)
Q Consensus 212 ~gD~~~~l 219 (317)
++|+.++.
T Consensus 111 ~~D~l~~~ 118 (353)
T 1i4w_A 111 KRDPYDWS 118 (353)
T ss_dssp CSCTTCHH
T ss_pred ECCccchh
Confidence 99998763
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.56 E-value=6.4e-05 Score=71.36 Aligned_cols=75 Identities=8% Similarity=0.159 Sum_probs=55.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC--CEE-EEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGC--SEV-HFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga--~~V-~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
+.-+++|||||.|.+++.+...|. ..| .++|+|+.++ +..+.|.... ++++|+.++.... ++ ...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~-~ty~~N~~~~-------~~~~DI~~~~~~~--i~--~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIAN-KIYSKNFKEE-------VQVKNLDSISIKQ--IE--SLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHH-HHHHHHHCCC-------CBCCCTTTCCHHH--HH--HTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHH-HHHHHHCCCC-------cccCChhhcCHHH--hc--cCC
Confidence 345899999999999998777784 567 7999999998 9999886321 4567766543211 00 136
Q ss_pred ccEEEECCCC
Q 021116 232 FDYMSVTPPY 241 (317)
Q Consensus 232 fDlV~~dPPy 241 (317)
+|+++..||.
T Consensus 77 ~Dil~ggpPC 86 (327)
T 3qv2_A 77 CNTWFMSPPC 86 (327)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEecCCc
Confidence 8999999994
No 300
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.51 E-value=0.00024 Score=67.88 Aligned_cols=82 Identities=17% Similarity=0.092 Sum_probs=62.2
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-G-CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-G-a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++..++|..||.|.-+.+++++ | ..+|+++|.|+.|+ +.++ ++ ..+++++++++..++...+... +-.++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al-~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~-g~~~~ 128 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI-AVAK-TI----DDPRFSIIHGPFSALGEYVAER-DLIGK 128 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHH-HHHT-TC----CCTTEEEEESCGGGHHHHHHHT-TCTTC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHH-hh----cCCcEEEEeCCHHHHHHHHHhc-CCCCc
Confidence 46889999999999999988875 3 35899999999999 8873 43 2467999999887765544311 11136
Q ss_pred ccEEEECCCCC
Q 021116 232 FDYMSVTPPYT 242 (317)
Q Consensus 232 fDlV~~dPPy~ 242 (317)
+|.|++|..+.
T Consensus 129 vDgILfDLGVS 139 (347)
T 3tka_A 129 IDGILLDLGVS 139 (347)
T ss_dssp EEEEEEECSCC
T ss_pred ccEEEECCccC
Confidence 99999987665
No 301
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.47 E-value=9.4e-05 Score=67.32 Aligned_cols=56 Identities=16% Similarity=0.318 Sum_probs=41.3
Q ss_pred eEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc--------c-------HHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 208 SSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV--------D-------YEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 208 v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~--------~-------~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+++++|+.+++..+ .+++||+||+||||... . +...++.+ .++|+++|.+++++.
T Consensus 5 ~~l~~gD~~~~l~~l-----~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~--~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 5 NKIHQMNCFDFLDQV-----ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKV--LDKLDKDGSLYIFNT 75 (260)
T ss_dssp SSEEECCHHHHHHHS-----CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHH--HHHEEEEEEEEEEEC
T ss_pred CeEEechHHHHHHhc-----cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHH--HHHhcCCeEEEEEcC
Confidence 458999999988765 24689999999999765 1 22333333 368999999999853
No 302
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.47 E-value=1.7e-05 Score=73.74 Aligned_cols=107 Identities=12% Similarity=0.005 Sum_probs=62.1
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPF 232 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~f 232 (317)
.++.+|||||||+|.++..++.+ ++.+|+++|+.-... ...... +..|. + +..+++++... ...+..|
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-~~pi~~-~~~g~-~-ii~~~~~~dv~-------~l~~~~~ 141 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-EKPMNV-QSLGW-N-IITFKDKTDIH-------RLEPVKC 141 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-CCCCCC-CBTTG-G-GEEEECSCCTT-------TSCCCCC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-cccccc-CcCCC-C-eEEEeccceeh-------hcCCCCc
Confidence 35679999999999999877764 666788888873221 111110 11121 2 34455554211 1135689
Q ss_pred cEEEECCCCCCcc-H---HHHHHHHH-HcCCcCCC-eEEEEEeCC
Q 021116 233 DYMSVTPPYTAVD-Y---EVLMAQIS-KSALVGKD-SFIVVEYPL 271 (317)
Q Consensus 233 DlV~~dPPy~~~~-~---~~~l~~L~-~~~lLkpg-G~ivv~~~~ 271 (317)
|+|++|.-.+.+. . ...+..+. ..++|+|| |.+++-.-.
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 9999996434332 1 11111121 23689999 999986554
No 303
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.39 E-value=2.4e-05 Score=72.80 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=63.2
Q ss_pred CCCCeEEEECCCcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|||||||.|.++..|+. .++..|+++|+..... ..+... +..+. +-+.+... |+..+ ...+
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~-~~pi~~-~~~g~-~ii~~~~~~dv~~l---------~~~~ 156 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGH-EKPIMR-TTLGW-NLIRFKDKTDVFNM---------EVIP 156 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTS-CCCCCC-CBTTG-GGEEEECSCCGGGS---------CCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcc-cccccc-ccCCC-ceEEeeCCcchhhc---------CCCC
Confidence 3567999999999999998774 5677899999975432 222210 11121 22333322 43321 3478
Q ss_pred ccEEEECCCCCCcc----HHHHHHHHH-HcCCcCCC--eEEEEEeCC
Q 021116 232 FDYMSVTPPYTAVD----YEVLMAQIS-KSALVGKD--SFIVVEYPL 271 (317)
Q Consensus 232 fDlV~~dPPy~~~~----~~~~l~~L~-~~~lLkpg--G~ivv~~~~ 271 (317)
+|+|++|.-.+.+. ....+..|. +..+|+|| |.+++-.-.
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 99999997444332 112111121 23589999 999986654
No 304
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.35 E-value=0.00037 Score=67.30 Aligned_cols=70 Identities=16% Similarity=0.033 Sum_probs=53.4
Q ss_pred CCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+|.+||||||.+|..+-.++++|+ +|++||..+-. ..+. .. .+++++++|+..+. .....||
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~--~~l~----~~---~~V~~~~~d~~~~~-------~~~~~~D 272 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA--QSLM----DT---GQVTWLREDGFKFR-------PTRSNIS 272 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC--HHHH----TT---TCEEEECSCTTTCC-------CCSSCEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC--hhhc----cC---CCeEEEeCcccccc-------CCCCCcC
Confidence 3689999999999999999999986 79999987532 2221 11 35899999987753 1246799
Q ss_pred EEEECCC
Q 021116 234 YMSVTPP 240 (317)
Q Consensus 234 lV~~dPP 240 (317)
+|++|.-
T Consensus 273 ~vvsDm~ 279 (375)
T 4auk_A 273 WMVCDMV 279 (375)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 9999974
No 305
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.34 E-value=0.00018 Score=67.70 Aligned_cols=60 Identities=13% Similarity=0.178 Sum_probs=43.8
Q ss_pred CceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc---------------cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 206 DVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV---------------DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 206 ~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~---------------~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++.+++++|+.+.+..+ .+++||+|++||||... .+.+.+..+ .++|+++|.+++++.
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~--~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVV--NKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHH--HHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHH--HHHCcCCcEEEEEEC
Confidence 45789999998876533 35789999999999754 123333333 468999999999987
Q ss_pred CC
Q 021116 271 LR 272 (317)
Q Consensus 271 ~~ 272 (317)
..
T Consensus 86 d~ 87 (323)
T 1boo_A 86 GA 87 (323)
T ss_dssp CC
T ss_pred CE
Confidence 54
No 306
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.34 E-value=0.00022 Score=67.34 Aligned_cols=61 Identities=15% Similarity=0.228 Sum_probs=43.5
Q ss_pred ceEEE-EecHHHHHHHHhhhcCCCCCccEEEECCCCCCc--------cHH-HHHHHHHH-cCCcCCCeEEEEEeCCC
Q 021116 207 VSSIH-TVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV--------DYE-VLMAQISK-SALVGKDSFIVVEYPLR 272 (317)
Q Consensus 207 ~v~ii-~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~--------~~~-~~l~~L~~-~~lLkpgG~ivv~~~~~ 272 (317)
..+++ ++|+.+++..+ .+++||+||+||||... .+. .+...+.. .++|+++|.+++++...
T Consensus 38 ~~~l~i~gD~l~~L~~l-----~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKL-----PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEEECCHHHHHHTS-----CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cceEEECCcHHHHHHhC-----ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 36788 99999988654 24689999999999754 122 22222222 46899999999998755
No 307
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.33 E-value=0.00032 Score=66.15 Aligned_cols=61 Identities=20% Similarity=0.193 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCH---HHHHHHHHHhHHHhC
Q 021116 133 MEVVKGAAFDILQSAGGCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDP---WVVSNVLIPNLEWTG 203 (317)
Q Consensus 133 ~~~v~~alf~~L~~~~~~~~~~~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~---~al~~~ar~N~~~~g 203 (317)
...+.+.+..... .++..|||+|||+|+.+++|...|. +.+++|+++ ..+ +.++++++..+
T Consensus 228 p~~l~~~~i~~~~--------~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~-~~~~~Rl~~~~ 291 (319)
T 1eg2_A 228 PAAVIERLVRALS--------HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYY-QKQLTFLQDDG 291 (319)
T ss_dssp CHHHHHHHHHHHS--------CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHH-HHHHHHC----
T ss_pred CHHHHHHHHHHhC--------CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHH-HHHHHHHHHcc
Confidence 3445555555442 3688999999999999999988874 799999999 998 99999987665
No 308
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.05 E-value=0.00057 Score=63.31 Aligned_cols=59 Identities=17% Similarity=0.277 Sum_probs=41.2
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc-c-------------HHHHHH----HHH-HcCCcCCCeEEEE
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-D-------------YEVLMA----QIS-KSALVGKDSFIVV 267 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-~-------------~~~~l~----~L~-~~~lLkpgG~ivv 267 (317)
+++++++|+.+++..+ .+++||+|++||||... . +++.+. .+. ..++|+|||.+++
T Consensus 21 ~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i 95 (297)
T 2zig_A 21 VHRLHVGDAREVLASF-----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVI 95 (297)
T ss_dssp CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhC-----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 4789999999876533 24689999999999632 1 122221 111 2478999999999
Q ss_pred EeC
Q 021116 268 EYP 270 (317)
Q Consensus 268 ~~~ 270 (317)
++.
T Consensus 96 ~~~ 98 (297)
T 2zig_A 96 VVG 98 (297)
T ss_dssp EEC
T ss_pred EEC
Confidence 876
No 309
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.93 E-value=0.00062 Score=62.11 Aligned_cols=101 Identities=11% Similarity=0.051 Sum_probs=65.1
Q ss_pred CCCCeEEEECCCcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~~~~~~~ 231 (317)
.++.+|+||||++|..+-.++ ..|+.+|+++|+...-. +.- ...+..|. +.+++.++ |++.. ...+
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-e~P-~~~~s~gw-n~v~fk~gvDv~~~---------~~~~ 144 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-EEP-VPMSTYGW-NIVKLMSGKDVFYL---------PPEK 144 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-CCC-CCCCCTTT-TSEEEECSCCGGGC---------CCCC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-cCc-chhhhcCc-CceEEEeccceeec---------CCcc
Confidence 357799999999999998655 46788999999987653 211 12344565 45899998 98543 2367
Q ss_pred ccEEEECCCCCCcc----HHHHHHHHH-HcCCcCCCeEEEE
Q 021116 232 FDYMSVTPPYTAVD----YEVLMAQIS-KSALVGKDSFIVV 267 (317)
Q Consensus 232 fDlV~~dPPy~~~~----~~~~l~~L~-~~~lLkpgG~ivv 267 (317)
+|+|++|---..+. ....+..|. ..+||+++ -+++
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~~-~fc~ 184 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKNN-QFCI 184 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSSC-EEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhcccC-CEEE
Confidence 99999995223222 122233332 23689884 4444
No 310
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.90 E-value=0.00017 Score=67.57 Aligned_cols=106 Identities=17% Similarity=0.086 Sum_probs=61.8
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~~~~~~~ 231 (317)
.++.+||||||++|.++-.++.+ |+..|+++|+..... ...+. .+..+. +-+.+..+ |+..+ ....
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~-~~P~~-~~~~~~-~iv~~~~~~di~~l---------~~~~ 147 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGH-EKPIH-MQTLGW-NIVKFKDKSNVFTM---------PTEP 147 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTS-CCCCC-CCBTTG-GGEEEECSCCTTTS---------CCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccc-ccccc-ccccCC-ceEEeecCceeeec---------CCCC
Confidence 46889999999999999988864 677899999965321 11100 001111 21223222 33221 2468
Q ss_pred ccEEEECCCCCCccH--HH--HHHHHH-HcCCcCCC-eEEEEEeCC
Q 021116 232 FDYMSVTPPYTAVDY--EV--LMAQIS-KSALVGKD-SFIVVEYPL 271 (317)
Q Consensus 232 fDlV~~dPPy~~~~~--~~--~l~~L~-~~~lLkpg-G~ivv~~~~ 271 (317)
+|+|++|.-.+.+.. +. .+..|. +..+|+|| |.+++-.-.
T Consensus 148 ~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 148 SDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 999999963334321 11 111121 23589999 999986553
No 311
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.90 E-value=0.0003 Score=64.75 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=58.5
Q ss_pred CCCCeEEEECCCcchHHHHHHHc-CC----CEEEEEe--CCHHHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIEAISR-GC----SEVHFVE--MDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaas~-Ga----~~V~aVD--in~~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~ 225 (317)
.++.+|+||||+.|+.+..|+.+ +. ..|+++| +.|... . ..|+ +-+.++++ |+.+.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~-~~Gv-~~i~~~~G~Df~~~------- 135 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------Q-SYGW-NIVTMKSGVDVFYK------- 135 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------C-STTG-GGEEEECSCCGGGS-------
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------c-CCCc-eEEEeeccCCccCC-------
Confidence 46899999999999999988775 22 2355555 222110 0 0122 22456667 98762
Q ss_pred cCCCCCccEEEECCCCCCcc----HHHHHHHHH-HcCCcCCCe-EEEEEeC
Q 021116 226 VGKDGPFDYMSVTPPYTAVD----YEVLMAQIS-KSALVGKDS-FIVVEYP 270 (317)
Q Consensus 226 ~~~~~~fDlV~~dPPy~~~~----~~~~l~~L~-~~~lLkpgG-~ivv~~~ 270 (317)
...++|+|++|.--..+. ....+..|. +.++|++|| .+++-.-
T Consensus 136 --~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 136 --PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp --CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred --CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 235799999996323332 222222221 225899999 7776443
No 312
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.67 E-value=0.0044 Score=64.71 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=41.6
Q ss_pred CCeEEEECCCcchHHHHHHHcC------CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH
Q 021116 156 PGRWLDLYSGTGSVGIEAISRG------CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL 219 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~G------a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l 219 (317)
.-+|+|||||.|.+++-+-..| ..-+.++|+|+.|+ +.-+.|.- + ..+++.|+.+++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~-~Ty~~Nhp-----~-~~~~~~di~~i~ 274 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFAC-QSLKYNHP-----Q-TEVRNEKADEFL 274 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHH-HHHHHHCT-----T-SEEEESCHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHH-HHHHHHCC-----C-CceecCcHHHhh
Confidence 4579999999999876544333 45689999999998 88877742 1 456777776653
No 313
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.65 E-value=0.0038 Score=60.62 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=46.1
Q ss_pred CCCCeEEEECCCcchHHHHHH-Hc-C-CCEEEEEeCCHHHHHHHHHHhHHH--hCCC-CceEEEE
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI-SR-G-CSEVHFVEMDPWVVSNVLIPNLEW--TGFL-DVSSIHT 212 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa-s~-G-a~~V~aVDin~~al~~~ar~N~~~--~gl~-~~v~ii~ 212 (317)
.++..|+|+||+.|..++.++ .. + ..+|+++|.+|..+ +.+++|++. |+.. +++++++
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~-~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINL-QTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHH-HHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHH-HHHHHHHHhhhccCCCCCEEEEE
Confidence 467899999999999999876 33 3 36899999999998 999999998 4333 4465554
No 314
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.57 E-value=0.0044 Score=66.78 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=58.4
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHh-----hhc--
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAE-----QFV-- 226 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~-----~~~-- 226 (317)
..-+++|||||.|.+++-+-..|. ..|.++|+++.++ +.-+.|.- + ..++.+|+.++..... ...
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~-~ty~~N~p-----~-~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAA-QAFRLNNP-----G-STVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHH-HHHHHHCT-----T-SEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHH-HHHHHhCC-----C-CccccccHHHHhhhccchhhhhhhhh
Confidence 345899999999999987767786 5688999999998 88777742 2 4678889877643210 000
Q ss_pred --CCCCCccEEEECCCCC
Q 021116 227 --GKDGPFDYMSVTPPYT 242 (317)
Q Consensus 227 --~~~~~fDlV~~dPPy~ 242 (317)
...+.+|+|+..||..
T Consensus 612 ~lp~~~~vDll~GGpPCQ 629 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQ 629 (1002)
T ss_dssp BCCCTTTCSEEEECCCCT
T ss_pred hcccCCCeeEEEEcCCCc
Confidence 0124689999999963
No 315
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.44 E-value=0.0009 Score=62.77 Aligned_cols=102 Identities=11% Similarity=-0.007 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~~~~~~~ 231 (317)
..+.+||||||++|.++-.++ ..|+.+|+|+|+...-- +.-+ ..+.++. +-+.++++ |+... ...+
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~h-e~P~-~~~ql~w-~lV~~~~~~Dv~~l---------~~~~ 160 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGH-EEPQ-LVQSYGW-NIVTMKSGVDVFYR---------PSEC 160 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTS-CCCC-CCCBTTG-GGEEEECSCCTTSS---------CCCC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCc-cCcc-hhhhcCC-cceEEEeccCHhhC---------CCCC
Confidence 356799999999999998555 46778899999987631 1000 0112222 12778877 87543 2367
Q ss_pred ccEEEECCCCCCcc----HHHHHHHHH-HcCCcCCC-eEEEE
Q 021116 232 FDYMSVTPPYTAVD----YEVLMAQIS-KSALVGKD-SFIVV 267 (317)
Q Consensus 232 fDlV~~dPPy~~~~----~~~~l~~L~-~~~lLkpg-G~ivv 267 (317)
+|+|++|---..+. ....+..|. ..+||++| |-+++
T Consensus 161 ~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 99999996422222 122232221 12588887 66655
No 316
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.38 E-value=0.0078 Score=56.65 Aligned_cols=127 Identities=12% Similarity=-0.010 Sum_probs=75.4
Q ss_pred CCeEEEECCCcchHHHHHH----HcC-CC--EEEEEeCCH--------HHH---HHHHHHhHHHhCCCCc--eEEEEecH
Q 021116 156 PGRWLDLYSGTGSVGIEAI----SRG-CS--EVHFVEMDP--------WVV---SNVLIPNLEWTGFLDV--SSIHTVRV 215 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaa----s~G-a~--~V~aVDin~--------~al---~~~ar~N~~~~gl~~~--v~ii~gD~ 215 (317)
.-+|||+|=|||...+.++ +.+ .. +.+.+|.++ +.+ .+....+...+. .++ .+++.+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~-~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE-GERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE-CSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc-CCcEEEEEEechH
Confidence 3579999999998665432 222 22 456666532 111 022222211111 122 46788999
Q ss_pred HHHHHHHhhhcCCCCCccEEEECCCCCC---cc--HHHHHHHHHHcCCcCCCeEEEEEeCCCCCc--cccCCCeEEEEEe
Q 021116 216 ETFLERAEQFVGKDGPFDYMSVTPPYTA---VD--YEVLMAQISKSALVGKDSFIVVEYPLRTDM--LDTCGCLVKIKDR 288 (317)
Q Consensus 216 ~~~l~~~~~~~~~~~~fDlV~~dPPy~~---~~--~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l--~~~~~~~~~~~~r 288 (317)
.+.+..+ ....||+|++|+ |.. .. -+++++.+. ++++|||++...+... .+ .....||.+.+..
T Consensus 176 ~~~l~~l-----~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~--~~~~pgg~laTYtaag-~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 176 RKRIKEV-----ENFKADAVFHDA-FSPYKNPELWTLDFLSLIK--ERIDEKGYWVSYSSSL-SVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp HHHGGGC-----CSCCEEEEEECC-SCTTTSGGGGSHHHHHHHH--TTEEEEEEEEESCCCH-HHHHHHHHTTCEEEEEE
T ss_pred HHHHhhh-----cccceeEEEeCC-CCcccCcccCCHHHHHHHH--HHhCCCcEEEEEeCcH-HHHHHHHHCCCEEEecC
Confidence 9887654 235799999997 332 11 267888876 5899999998755432 21 1235899998888
Q ss_pred ecCc
Q 021116 289 RFGR 292 (317)
Q Consensus 289 ~yG~ 292 (317)
.||.
T Consensus 247 G~g~ 250 (308)
T 3vyw_A 247 EIGR 250 (308)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8885
No 317
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=96.28 E-value=0.011 Score=65.49 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=58.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHh----------
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGC-SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAE---------- 223 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga-~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~---------- 223 (317)
..-+++|||||.|.+++-+-..|. ..|.++|+++.|+ +.-+.|.. + ..++.+|+.++.....
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~-~ty~~N~p-----~-~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA-QAFRLNNP-----G-TTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHH-HHHHHHCT-----T-SEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHH-HHHHHhCC-----C-CcEeeccHHHHhHhhhccchhhhhhh
Confidence 346899999999999987777786 5689999999998 88877741 2 4577889887654321
Q ss_pred hhcCCCCCccEEEECCCCC
Q 021116 224 QFVGKDGPFDYMSVTPPYT 242 (317)
Q Consensus 224 ~~~~~~~~fDlV~~dPPy~ 242 (317)
.++ ..+.+|+|+..||..
T Consensus 923 ~lp-~~~~vDvl~GGpPCQ 940 (1330)
T 3av4_A 923 RLP-QKGDVEMLCGGPPCQ 940 (1330)
T ss_dssp BCC-CTTTCSEEEECCCCT
T ss_pred hcc-ccCccceEEecCCCc
Confidence 000 123689999999964
No 318
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.94 E-value=0.0041 Score=60.59 Aligned_cols=44 Identities=11% Similarity=-0.061 Sum_probs=36.0
Q ss_pred CCeEEEECCCcchHHHHHHHcC--CCE----EEEEeCCHHHHHHHHHHhHH
Q 021116 156 PGRWLDLYSGTGSVGIEAISRG--CSE----VHFVEMDPWVVSNVLIPNLE 200 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~G--a~~----V~aVDin~~al~~~ar~N~~ 200 (317)
.-+|+|||||.|++...+-..| ..- |.++|+|+.|+ +.-+.|..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~-~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAI-VSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHH-HHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHH-HHHHHHcC
Confidence 3589999999999988665556 344 88999999998 88888864
No 319
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.84 E-value=0.016 Score=54.50 Aligned_cols=111 Identities=11% Similarity=-0.006 Sum_probs=67.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCCeEEEECC------CcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEE
Q 021116 137 KGAAFDILQSAGGCPASLRPGRWLDLYS------GTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSI 210 (317)
Q Consensus 137 ~~alf~~L~~~~~~~~~~~~~rVLDlgc------GtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~i 210 (317)
..++++.|....-+ ...+.+|||+|| -.|+.-+.-+......|+++|+++-.. ..+ .+
T Consensus 93 ytqlcqyl~~~~~~--vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s------------da~--~~ 156 (344)
T 3r24_A 93 YTQLCQYLNTLTLA--VPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS------------DAD--ST 156 (344)
T ss_dssp HHHHHHHHTTSCCC--CCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC------------SSS--EE
T ss_pred HHHHHHHhccccEe--ecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc------------CCC--eE
Confidence 34678888553211 146899999997 556633222211113899999998431 112 35
Q ss_pred EEecHHHHHHHHhhhcCCCCCccEEEECCCCC-Cc-----------cHHHHHHHHHHcCCcCCCeEEEEEeCCCC
Q 021116 211 HTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-AV-----------DYEVLMAQISKSALVGKDSFIVVEYPLRT 273 (317)
Q Consensus 211 i~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-~~-----------~~~~~l~~L~~~~lLkpgG~ivv~~~~~~ 273 (317)
+++|+.+.. ...+||+|+.|.--. .+ ..+..++... ..|++||.+++-.-..+
T Consensus 157 IqGD~~~~~--------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~--~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 157 LIGDCATVH--------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIK--QKLALGGSIAVKITEHS 221 (344)
T ss_dssp EESCGGGEE--------ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHH--HHEEEEEEEEEEECSSS
T ss_pred EEccccccc--------cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHH--HhCcCCCEEEEEEecCC
Confidence 999976532 237899999996322 12 1244444443 48999999998765443
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.36 E-value=0.012 Score=60.43 Aligned_cols=131 Identities=13% Similarity=0.015 Sum_probs=77.6
Q ss_pred CCCeEEEECCCcchHHHHHHHc-----------CC--CEEEEEeCCHHHHHHHHHHhH--------------HH------
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR-----------GC--SEVHFVEMDPWVVSNVLIPNL--------------EW------ 201 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~-----------Ga--~~V~aVDin~~al~~~ar~N~--------------~~------ 201 (317)
+.-+|+|+|-|+|...+.++.. .. -+++.+|..|... +.+++-+ +.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~-~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHV-ADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCH-HHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCH-HHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 3468999999999888765432 11 3789999955332 2222211 11
Q ss_pred ----hCCCC---ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC----cc-HHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 202 ----TGFLD---VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA----VD-YEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 202 ----~gl~~---~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~----~~-~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+++ .++++.||+.+.+..+.. .....+|.+|+|+ |.. .. -.+++..+. +++++||.+....
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~--~~~~~~da~flD~-f~p~~np~~w~~~~~~~l~--~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDD--SLNNQVDAWFLDG-FAPAKNPDMWNEQLFNAMA--RMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCG--GGTTCEEEEEECS-SCC--CCTTCSHHHHHHHH--HHEEEEEEEEESC
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhccc--ccCCceeEEEECC-CCCCCChhhhhHHHHHHHH--HHhCCCCEEEecc
Confidence 11122 467889999988754310 0136799999997 321 11 256677765 3788999876543
Q ss_pred CCCCCcc--ccCCCeEEEEEeecCc
Q 021116 270 PLRTDML--DTCGCLVKIKDRRFGR 292 (317)
Q Consensus 270 ~~~~~l~--~~~~~~~~~~~r~yG~ 292 (317)
. ...+. ....||.+.+-+.+|.
T Consensus 212 ~-~~~vr~~l~~aGf~~~~~~~~~~ 235 (689)
T 3pvc_A 212 A-AGFVRRGLQQAGFNVTKVKGFGQ 235 (689)
T ss_dssp C-CHHHHHHHHHTTCEEEEEECSSS
T ss_pred C-cHHHHHHHHhCCeEEEeccCCCc
Confidence 3 22221 1247787766666664
No 321
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.25 E-value=0.24 Score=45.27 Aligned_cols=108 Identities=12% Similarity=0.032 Sum_probs=70.3
Q ss_pred CCeEEEECCCcchHHHHHHHc-------C-CCEEEEEe-----CCH----------------------HHHHH--HHHHh
Q 021116 156 PGRWLDLYSGTGSVGIEAISR-------G-CSEVHFVE-----MDP----------------------WVVSN--VLIPN 198 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~-------G-a~~V~aVD-----in~----------------------~al~~--~ar~N 198 (317)
...|+++|+..|...+.++.. + ..+|+++| -.+ +.+.+ ..++|
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 457999999999887764431 2 35799999 221 11201 12344
Q ss_pred HHHhCC-CCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHH---HHHHHHHcCCcCCCeEEEEEeC
Q 021116 199 LEWTGF-LDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEV---LMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 199 ~~~~gl-~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~---~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+..+. .++++++.|++.+.+..+.. .....+||+|++|. . .|+. .++.+. ++|.+||+|++..-
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~-~~~~~~~dlv~ID~--D--~Y~~t~~~le~~~--p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLA-ENPQTVIALAYFDL--D--LYEPTKAVLEAIR--PYLTKGSIVAFDEL 218 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHH-HCTTCCEEEEEECC--C--CHHHHHHHHHHHG--GGEEEEEEEEESST
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHH-hCCCCceEEEEEcC--c--ccchHHHHHHHHH--HHhCCCcEEEEcCC
Confidence 455665 47899999999988765421 01235799999996 2 3444 455544 58999999998663
No 322
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.13 E-value=0.068 Score=50.31 Aligned_cols=96 Identities=14% Similarity=0.103 Sum_probs=58.9
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~~~ 228 (317)
.++++||-.|||. |.+++.+++ .|+.+|+++|.+++.+ +.+++ +|.+ .++.. |+.+.+....
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~----lGa~---~vi~~~~~~~~~~~~~~~----- 255 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQ----LGAT---HVINSKTQDPVAAIKEIT----- 255 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT-----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHH----cCCC---EEecCCccCHHHHHHHhc-----
Confidence 4688999998764 555555444 5776899999999987 77753 4542 23332 3333332221
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+.+|+||-.-. . ...++... +.|+++|++++.-
T Consensus 256 ~gg~D~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~G 289 (371)
T 1f8f_A 256 DGGVNFALESTG----S-PEILKQGV--DALGILGKIAVVG 289 (371)
T ss_dssp TSCEEEEEECSC----C-HHHHHHHH--HTEEEEEEEEECC
T ss_pred CCCCcEEEECCC----C-HHHHHHHH--HHHhcCCEEEEeC
Confidence 237999986431 1 22333332 3789999988754
No 323
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.96 E-value=0.12 Score=49.58 Aligned_cols=19 Identities=26% Similarity=0.321 Sum_probs=16.5
Q ss_pred CCeEEEECCCcchHHHHHH
Q 021116 156 PGRWLDLYSGTGSVGIEAI 174 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaa 174 (317)
.-+|+|+|||+|..++.++
T Consensus 53 ~~~IaDlGCssG~Nt~~~v 71 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHII 71 (374)
T ss_dssp CEEEEEETCCSSHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHH
Confidence 5789999999999998663
No 324
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.49 E-value=0.18 Score=47.17 Aligned_cols=99 Identities=10% Similarity=-0.010 Sum_probs=58.3
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEec---HHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR---VETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD---~~~~l~~~~~~~~~ 228 (317)
.++++||-.|||. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+ .++..+ ..++........
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa~---~vi~~~~~~~~~~~~~i~~~~-- 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAK----EIGAD---LVLQISKESPQEIARKVEGQL-- 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHH----HTTCS---EEEECSSCCHHHHHHHHHHHH--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----HhCCC---EEEcCcccccchHHHHHHHHh--
Confidence 4688999998753 444444444 6776899999999987 7775 35653 234332 233332221111
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...+|+||-.-. . ...++... +.|+++|++++.-
T Consensus 240 ~~g~D~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTG----A-EASIQAGI--YATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSC----C-HHHHHHHH--HHSCTTCEEEECS
T ss_pred CCCCCEEEECCC----C-hHHHHHHH--HHhcCCCEEEEEe
Confidence 146999986531 1 22233322 2689999988753
No 325
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=94.42 E-value=0.071 Score=51.54 Aligned_cols=77 Identities=12% Similarity=0.023 Sum_probs=44.4
Q ss_pred CCeEEEECCCcchHHHHHHHc------------------CCCEEEEEeCC-----------HHHHHHHHHHhHHHhCCCC
Q 021116 156 PGRWLDLYSGTGSVGIEAISR------------------GCSEVHFVEMD-----------PWVVSNVLIPNLEWTGFLD 206 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~------------------Ga~~V~aVDin-----------~~al~~~ar~N~~~~gl~~ 206 (317)
.-+|+|+||++|..++.+++. .--+|++.|+- +... +.+++ ..|-..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~-~~~~~---~~g~~~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFY-RNLEK---ENGRKI 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHH-HHHHH---HTCCCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhH-hhhhh---hccCCC
Confidence 578999999999999876543 11257777775 3332 22211 122211
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCC
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPP 240 (317)
.-.++.+....|...+ ....++|+|+.+--
T Consensus 129 ~~~f~~gvpgSFy~rl----fp~~S~d~v~Ss~a 158 (384)
T 2efj_A 129 GSCLIGAMPGSFYSRL----FPEESMHFLHSCYC 158 (384)
T ss_dssp TSEEEEECCSCTTSCC----SCTTCEEEEEEESC
T ss_pred CceEEEecchhhhhcc----CCCCceEEEEecce
Confidence 2346666655543222 24678999998543
No 326
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.13 E-value=0.15 Score=48.74 Aligned_cols=101 Identities=14% Similarity=0.044 Sum_probs=72.3
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCC-ceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLD-VSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~-~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
.+.+||.++.+.|.+++.++.. .++.+.=+--+. +.++.|++.||+.+ .+++.... .. ....||
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~-~~~~~n~~~~~~~~~~~~~~~~~-~~----------~~~~~~ 102 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISE-LATRENLRLNGIDESSVKFLDST-AD----------YPQQPG 102 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHH-HHHHHHHHHTTCCGGGSEEEETT-SC----------CCSSCS
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHH-HHHHHHHHHcCCCccceEecccc-cc----------cccCCC
Confidence 3568999999999999876543 256665566665 78899999999974 35554321 11 136799
Q ss_pred EEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
+|++-.|-........+..+. ..|.+++.+++.-...
T Consensus 103 ~v~~~lpk~~~~l~~~L~~l~--~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 103 VVLIKVPKTLALLEQQLRALR--KVVTSDTRIIAGAKAR 139 (375)
T ss_dssp EEEEECCSCHHHHHHHHHHHH--TTCCTTSEEEEEEEGG
T ss_pred EEEEEcCCCHHHHHHHHHHHH--hhCCCCCEEEEEeccc
Confidence 999998876656666677765 4789999987765533
No 327
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.89 E-value=0.18 Score=46.61 Aligned_cols=94 Identities=17% Similarity=0.101 Sum_probs=58.5
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~~ 228 (317)
.++++||-.|||. |.+++.+++ .|+ +|+++|.+++.+ +.+++ +|.+ .++. .|..+.+...
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~~i~~~~~~~~~~~~~~------ 229 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKL-NLARR----LGAE---VAVNARDTDPAAWLQKE------ 229 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHHH------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHH-HHHHH----cCCC---EEEeCCCcCHHHHHHHh------
Confidence 4688999998764 566665554 577 899999999987 77653 5653 2233 2333333322
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+.+|+||-+-. . .+.++... +.|+++|++++.-
T Consensus 230 ~g~~d~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~G 263 (340)
T 3s2e_A 230 IGGAHGVLVTAV----S-PKAFSQAI--GMVRRGGTIALNG 263 (340)
T ss_dssp HSSEEEEEESSC----C-HHHHHHHH--HHEEEEEEEEECS
T ss_pred CCCCCEEEEeCC----C-HHHHHHHH--HHhccCCEEEEeC
Confidence 147999987631 1 22333332 2689999988754
No 328
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.79 E-value=0.032 Score=53.47 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=49.6
Q ss_pred CCCeEEEECCCcchHHHHHHHc------------C-----CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHH
Q 021116 155 RPGRWLDLYSGTGSVGIEAISR------------G-----CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~------------G-----a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~ 217 (317)
..-+|+|+||++|..++.+++. + .-+|++.|.-.... ..+-+++..+.-.++..++.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDF-ntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDF-NAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCH-HHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHH-HHHHHhcchhcccCCCEEEEecchh
Confidence 3467999999999887754332 2 12688999877777 6666666532211123566666554
Q ss_pred HHHHHhhhcCCCCCccEEEEC
Q 021116 218 FLERAEQFVGKDGPFDYMSVT 238 (317)
Q Consensus 218 ~l~~~~~~~~~~~~fDlV~~d 238 (317)
|...+ ....++|+|+.+
T Consensus 130 Fy~rl----fp~~S~d~v~Ss 146 (359)
T 1m6e_X 130 FYGRL----FPRNTLHFIHSS 146 (359)
T ss_dssp SSSCC----SCTTCBSCEEEE
T ss_pred hhhcc----CCCCceEEEEeh
Confidence 43222 346789999974
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.63 E-value=0.18 Score=47.03 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=57.1
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~~ 228 (317)
.++++||=.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.+++ +|.+ .++. .|..+.+.... .
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~----lGa~---~vi~~~~~~~~~~v~~~t----~ 232 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALE----YGAT---DIINYKNGDIVEQILKAT----D 232 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHH----HTCC---EEECGGGSCHHHHHHHHT----T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHH----hCCc---eEEcCCCcCHHHHHHHHc----C
Confidence 4688999987643 444444444 5776799999999987 77754 5653 2333 23333333331 1
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...+|+||-.-.- ...+...++ .|+++|++++.-
T Consensus 233 g~g~D~v~d~~g~-~~~~~~~~~------~l~~~G~~v~~G 266 (352)
T 3fpc_A 233 GKGVDKVVIAGGD-VHTFAQAVK------MIKPGSDIGNVN 266 (352)
T ss_dssp TCCEEEEEECSSC-TTHHHHHHH------HEEEEEEEEECC
T ss_pred CCCCCEEEECCCC-hHHHHHHHH------HHhcCCEEEEec
Confidence 2369999854211 112233332 589999988654
No 330
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.51 E-value=0.13 Score=49.04 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=58.2
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecH-HHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRV-ETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~-~~~l~~~~~~~~ 227 (317)
.++++||-+|||. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|. + ++. .|. .+.+....
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa-~---~i~~~~~~~~~~~~~~~~---- 250 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL-KLLS----DAGF-E---TIDLRNSAPLRDQIDQIL---- 250 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHH----TTTC-E---EEETTSSSCHHHHHHHHH----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH----HcCC-c---EEcCCCcchHHHHHHHHh----
Confidence 4689999999764 555555554 6876899999999987 7765 3464 2 232 232 23332222
Q ss_pred CCCCccEEEECCCCCCc---------cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAV---------DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~---------~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-.-.-... .....++... +.|+++|++++.-
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~--~~l~~gG~iv~~G 299 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLF--DVVRAGGAIGIPG 299 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHH--HHEEEEEEEECCS
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHH--HHHhcCCEEEEec
Confidence 12369999854321100 0011233322 2689999987643
No 331
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.35 E-value=0.13 Score=48.48 Aligned_cols=99 Identities=12% Similarity=-0.023 Sum_probs=57.5
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~~ 228 (317)
.++++||=.|+|. |.+++.+++ .|+.+|+++|.+++.. +.+++ +|... ++. .|..+.+.... ...
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~----lGa~~---vi~~~~~~~~~~i~~~~--~~~ 250 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKR-RLAEE----VGATA---TVDPSAGDVVEAIAGPV--GLV 250 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHH----HTCSE---EECTTSSCHHHHHHSTT--SSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----cCCCE---EECCCCcCHHHHHHhhh--hcc
Confidence 4688999998743 344444443 6877899999999987 77754 56532 232 34333332200 011
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+.+|+||-.- +. ...++... +.|+++|.+++.-
T Consensus 251 ~gg~Dvvid~~----G~-~~~~~~~~--~~l~~~G~vv~~G 284 (370)
T 4ej6_A 251 PGGVDVVIECA----GV-AETVKQST--RLAKAGGTVVILG 284 (370)
T ss_dssp TTCEEEEEECS----CC-HHHHHHHH--HHEEEEEEEEECS
T ss_pred CCCCCEEEECC----CC-HHHHHHHH--HHhccCCEEEEEe
Confidence 24799998642 11 22333332 2689999988754
No 332
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.68 E-value=0.23 Score=42.02 Aligned_cols=95 Identities=9% Similarity=-0.023 Sum_probs=54.7
Q ss_pred CCCCeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||..|+ |.|...+..+ ..|+ +|+++|.+++.+ +.+++ .|.. . ++. .|..+.+....
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~-~~~~~----~g~~--~-~~d~~~~~~~~~~~~~~---- 103 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKR-EMLSR----LGVE--Y-VGDSRSVDFADEILELT---- 103 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHH-HHHHT----TCCS--E-EEETTCSTHHHHHHHHT----
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHH----cCCC--E-EeeCCcHHHHHHHHHHh----
Confidence 46789999984 3444444433 3576 799999999887 66643 4542 1 222 22222222221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-+. .. ..++... +.|+++|++++.-
T Consensus 104 ~~~~~D~vi~~~--g~----~~~~~~~--~~l~~~G~~v~~g 137 (198)
T 1pqw_A 104 DGYGVDVVLNSL--AG----EAIQRGV--QILAPGGRFIELG 137 (198)
T ss_dssp TTCCEEEEEECC--CT----HHHHHHH--HTEEEEEEEEECS
T ss_pred CCCCCeEEEECC--ch----HHHHHHH--HHhccCCEEEEEc
Confidence 124699999764 21 2333332 3789999988754
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.65 E-value=0.38 Score=45.53 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=57.1
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---c-HHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---R-VETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D-~~~~l~~~~~~~~ 227 (317)
.++++||-.|||. |.+++.+++ +|+.+|+++|.+++.+ +.+++ +|. + ++.. | +.+.+....
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~----lGa-~---~i~~~~~~~~~~~v~~~t---- 250 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKA----QGF-E---IADLSLDTPLHEQIAALL---- 250 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHH----TTC-E---EEETTSSSCHHHHHHHHH----
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHH----cCC-c---EEccCCcchHHHHHHHHh----
Confidence 4688999988643 445555444 6877899999999998 87753 565 2 2221 2 333333322
Q ss_pred CCCCccEEEECCCCCC----------ccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 228 KDGPFDYMSVTPPYTA----------VDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~----------~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
....+|+||-.-.... ......++... +.|+++|.+++.
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~G~iv~~ 299 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLM--QVTRVAGKIGIP 299 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHH--HHEEEEEEEEEC
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHH--HHHhcCCEEEEe
Confidence 1236999985422110 00012233322 268999998764
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.38 Score=45.15 Aligned_cols=96 Identities=13% Similarity=0.070 Sum_probs=56.9
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-----gD~~~~l~~~~~~~ 226 (317)
.++++||-.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+ .++. .|+.+.+....
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~~~~~~~~--- 259 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAK----VFGAT---DFVNPNDHSEPISQVLSKMT--- 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH----HTTCC---EEECGGGCSSCHHHHHHHHH---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH----HhCCc---eEEeccccchhHHHHHHHHh---
Confidence 4688999998642 334444443 6776899999999887 7765 35653 2232 12333333322
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCC-eEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKD-SFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpg-G~ivv~~ 269 (317)
.+.+|+||-.-. . ...++... +.|+++ |.+++.-
T Consensus 260 --~~g~D~vid~~g----~-~~~~~~~~--~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 260 --NGGVDFSLECVG----N-VGVMRNAL--ESCLKGWGVSVLVG 294 (374)
T ss_dssp --TSCBSEEEECSC----C-HHHHHHHH--HTBCTTTCEEEECS
T ss_pred --CCCCCEEEECCC----C-HHHHHHHH--HHhhcCCcEEEEEc
Confidence 237999986431 1 22333332 278999 9988654
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.22 E-value=0.38 Score=45.11 Aligned_cols=96 Identities=15% Similarity=-0.035 Sum_probs=56.9
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-----gD~~~~l~~~~~~~ 226 (317)
.++++||=+|||. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+ .++. .|+.+.+....
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa~---~vi~~~~~~~~~~~~i~~~t--- 258 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAI----ELGAT---ECLNPKDYDKPIYEVICEKT--- 258 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH----HTTCS---EEECGGGCSSCHHHHHHHHT---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHH----HcCCc---EEEecccccchHHHHHHHHh---
Confidence 4688999998642 333444343 5776899999999887 7775 35653 2232 12333333321
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCC-eEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKD-SFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpg-G~ivv~~ 269 (317)
.+.+|+||-.- +. ...++... +.|+++ |.+++.-
T Consensus 259 --~gg~Dvvid~~----g~-~~~~~~~~--~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 --NGGVDYAVECA----GR-IETMMNAL--QSTYCGSGVTVVLG 293 (373)
T ss_dssp --TSCBSEEEECS----CC-HHHHHHHH--HTBCTTTCEEEECC
T ss_pred --CCCCCEEEECC----CC-HHHHHHHH--HHHhcCCCEEEEEc
Confidence 23799998642 11 22333332 278999 9987654
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.09 E-value=1.2 Score=41.46 Aligned_cols=102 Identities=11% Similarity=-0.086 Sum_probs=56.4
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE--ecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT--VRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~--gD~~~~l~~~~~~~~~~ 229 (317)
.++++||=.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.+++. . ..-+.... .+-.++......+ ...
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~-t~g 250 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI-C----PEVVTHKVERLSAEESAKKIVES-FGG 250 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH-C----TTCEEEECCSCCHHHHHHHHHHH-TSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-c----hhcccccccccchHHHHHHHHHH-hCC
Confidence 4688899888743 444444443 6776699999999998 888754 1 12122211 1122222222111 123
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+|+||-.- +. ...++... +.|+++|++++.-
T Consensus 251 ~g~Dvvid~~----g~-~~~~~~~~--~~l~~~G~iv~~G 283 (363)
T 3m6i_A 251 IEPAVALECT----GV-ESSIAAAI--WAVKFGGKVFVIG 283 (363)
T ss_dssp CCCSEEEECS----CC-HHHHHHHH--HHSCTTCEEEECC
T ss_pred CCCCEEEECC----CC-hHHHHHHH--HHhcCCCEEEEEc
Confidence 4699998642 11 22233322 2689999988754
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.06 E-value=0.46 Score=44.56 Aligned_cols=96 Identities=11% Similarity=-0.014 Sum_probs=56.5
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-----gD~~~~l~~~~~~~ 226 (317)
.++++||=.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+ .++. .|+.+.+....
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~----~lGa~---~vi~~~~~~~~~~~~v~~~~--- 262 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAK----ALGAT---DCLNPRELDKPVQDVITELT--- 262 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH----HTTCS---EEECGGGCSSCHHHHHHHHH---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HhCCc---EEEccccccchHHHHHHHHh---
Confidence 4688999998642 333444343 6776899999999887 7765 35653 1232 12333333322
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCC-eEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKD-SFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpg-G~ivv~~ 269 (317)
.+.+|+||-.- +. ...++... +.|+++ |++++.-
T Consensus 263 --~~g~Dvvid~~----G~-~~~~~~~~--~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 263 --AGGVDYSLDCA----GT-AQTLKAAV--DCTVLGWGSCTVVG 297 (376)
T ss_dssp --TSCBSEEEESS----CC-HHHHHHHH--HTBCTTTCEEEECC
T ss_pred --CCCccEEEECC----CC-HHHHHHHH--HHhhcCCCEEEEEC
Confidence 23799998642 11 22333332 278999 9987643
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.87 E-value=0.44 Score=44.63 Aligned_cols=96 Identities=17% Similarity=0.019 Sum_probs=56.6
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-----gD~~~~l~~~~~~~ 226 (317)
.++++||-.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+ .++. .|+.+.+....
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~~~v~~~~--- 257 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAK----EFGAT---ECINPQDFSKPIQEVLIEMT--- 257 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH----HHTCS---EEECGGGCSSCHHHHHHHHT---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HcCCc---eEeccccccccHHHHHHHHh---
Confidence 4688999998642 333334333 5776899999999887 7775 35653 1232 12333333321
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCC-eEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKD-SFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpg-G~ivv~~ 269 (317)
.+.+|+||-.-. . ...++... +.|+++ |++++.-
T Consensus 258 --~~g~D~vid~~g----~-~~~~~~~~--~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 258 --DGGVDYSFECIG----N-VKVMRAAL--EACHKGWGVSVVVG 292 (373)
T ss_dssp --TSCBSEEEECSC----C-HHHHHHHH--HTBCTTTCEEEECS
T ss_pred --CCCCCEEEECCC----c-HHHHHHHH--HhhccCCcEEEEEe
Confidence 237999986421 1 22333332 278999 9988654
No 339
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.84 E-value=0.54 Score=44.72 Aligned_cols=99 Identities=11% Similarity=-0.002 Sum_probs=57.8
Q ss_pred CCCCeEEEECCCcchHHHH---HH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE---AI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie---aa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~ 226 (317)
.++++||=.|+ |.+|+. ++ ..|+.+|+++|.+++.+ +.++ .+|.+ .++. .|..+.+....
T Consensus 212 ~~g~~VlV~Ga--G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~i~~~t--- 278 (404)
T 3ip1_A 212 RPGDNVVILGG--GPIGLAAVAILKHAGASKVILSEPSEVRR-NLAK----ELGAD---HVIDPTKENFVEAVLDYT--- 278 (404)
T ss_dssp CTTCEEEEECC--SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHH----HHTCS---EEECTTTSCHHHHHHHHT---
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH----HcCCC---EEEcCCCCCHHHHHHHHh---
Confidence 46889998886 455543 33 36877899999999988 7775 35643 2333 24433333332
Q ss_pred CCCCCccEEEECCCCCCc--cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 227 GKDGPFDYMSVTPPYTAV--DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~--~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
....+|+||-.- +.. .+...++.+. +.++++|.+++.-.
T Consensus 279 -~g~g~D~vid~~--g~~~~~~~~~~~~l~--~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 279 -NGLGAKLFLEAT--GVPQLVWPQIEEVIW--RARGINATVAIVAR 319 (404)
T ss_dssp -TTCCCSEEEECS--SCHHHHHHHHHHHHH--HCSCCCCEEEECSC
T ss_pred -CCCCCCEEEECC--CCcHHHHHHHHHHHH--hccCCCcEEEEeCC
Confidence 133699998542 111 1223333321 13499999887543
No 340
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.83 E-value=0.38 Score=45.28 Aligned_cols=96 Identities=16% Similarity=0.061 Sum_probs=57.6
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-----gD~~~~l~~~~~~~ 226 (317)
.++++||=+|+|. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+. ++. .|+.+.+....
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~-~~a~----~lGa~~---vi~~~~~~~~~~~~i~~~~--- 260 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY-ETAK----KFGVNE---FVNPKDHDKPIQEVIVDLT--- 260 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH-HHHH----TTTCCE---EECGGGCSSCHHHHHHHHT---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HcCCcE---EEccccCchhHHHHHHHhc---
Confidence 4688999998742 444444443 5876899999999887 7765 456532 232 23334343332
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCC-eEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKD-SFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpg-G~ivv~~ 269 (317)
.+.+|+||-.- +. ...++... +.|+++ |++++.-
T Consensus 261 --~gg~D~vid~~----g~-~~~~~~~~--~~l~~g~G~iv~~G 295 (378)
T 3uko_A 261 --DGGVDYSFECI----GN-VSVMRAAL--ECCHKGWGTSVIVG 295 (378)
T ss_dssp --TSCBSEEEECS----CC-HHHHHHHH--HTBCTTTCEEEECS
T ss_pred --CCCCCEEEECC----CC-HHHHHHHH--HHhhccCCEEEEEc
Confidence 24799998642 11 22333332 278996 9888754
No 341
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.37 E-value=0.59 Score=43.24 Aligned_cols=98 Identities=13% Similarity=0.001 Sum_probs=58.1
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe--cHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV--RVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g--D~~~~l~~~~~~~~~~ 229 (317)
.++++||=.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.++ .+|.+. ++.. |..+.+.... ..
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~----~lGa~~---~i~~~~~~~~~v~~~t----~g 237 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAR----EVGADA---AVKSGAGAADAIRELT----GG 237 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHH----HTTCSE---EEECSTTHHHHHHHHH----GG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH----HcCCCE---EEcCCCcHHHHHHHHh----CC
Confidence 4688999998743 444444444 4567899999999998 7775 356532 2322 3333332222 12
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
..+|+||-.- +. ...++... +.|+++|++++.-.
T Consensus 238 ~g~d~v~d~~----G~-~~~~~~~~--~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFV----GA-QSTIDTAQ--QVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESS----CC-HHHHHHHH--HHEEEEEEEEECSC
T ss_pred CCCeEEEECC----CC-HHHHHHHH--HHHhcCCEEEEECC
Confidence 3699988642 11 22333332 26899999887543
No 342
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.37 E-value=0.46 Score=44.10 Aligned_cols=96 Identities=13% Similarity=0.003 Sum_probs=58.6
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~----gD~~~~l~~~~~~~ 226 (317)
.++++||-.|+ |.|...+.+++ .|+ +|+++|.+++.+ +.+++ +|.. .++. .|+.+.+....
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~-~~~~~----~g~~---~~~d~~~~~~~~~~~~~~~--- 235 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKE-ELFRS----IGGE---VFIDFTKEKDIVGAVLKAT--- 235 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHH-HHHHH----TTCC---EEEETTTCSCHHHHHHHHH---
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHH-HHHHH----cCCc---eEEecCccHhHHHHHHHHh---
Confidence 46889999997 45555555444 676 799999998877 66653 4542 1222 23333333322
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+.+|+||-.-. . ...++... +.|+++|+++..-.
T Consensus 236 --~~~~D~vi~~~g----~-~~~~~~~~--~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 --DGGAHGVINVSV----S-EAAIEAST--RYVRANGTTVLVGM 270 (347)
T ss_dssp --TSCEEEEEECSS----C-HHHHHHHT--TSEEEEEEEEECCC
T ss_pred --CCCCCEEEECCC----c-HHHHHHHH--HHHhcCCEEEEEeC
Confidence 126999987642 1 23344433 58899999886543
No 343
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.36 E-value=0.54 Score=43.22 Aligned_cols=94 Identities=16% Similarity=0.067 Sum_probs=56.8
Q ss_pred CCCCeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~----gD~~~~l~~~~~~~ 226 (317)
.++++||-.|| |.|...+.++ ..|+ +|+++|.+++.+ +.++ .+|.. . ++. .|+.+.+....
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~-~~~~----~~g~~--~-~~d~~~~~~~~~~~~~~~--- 211 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKI-AYLK----QIGFD--A-AFNYKTVNSLEEALKKAS--- 211 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHH----HTTCS--E-EEETTSCSCHHHHHHHHC---
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHH----hcCCc--E-EEecCCHHHHHHHHHHHh---
Confidence 46889999997 4455554444 3676 799999999887 7663 23542 1 222 23333333321
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+.+|++|-+-. . ..++... +.|+++|++++.-
T Consensus 212 --~~~~d~vi~~~g----~--~~~~~~~--~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 --PDGYDCYFDNVG----G--EFLNTVL--SQMKDFGKIAICG 244 (333)
T ss_dssp --TTCEEEEEESSC----H--HHHHHHH--TTEEEEEEEEECC
T ss_pred --CCCCeEEEECCC----h--HHHHHHH--HHHhcCCEEEEEe
Confidence 247999987641 1 2233332 4799999988653
No 344
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.31 E-value=0.31 Score=45.11 Aligned_cols=96 Identities=8% Similarity=-0.147 Sum_probs=59.1
Q ss_pred CCCCeEEEECCC--cchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSG--TGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcG--tG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||-.||| .|..++.+++ .|+ +|+++|.+++.+ +.+++ +|.+ .++. .|..+.+....
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----lga~---~~~~~~~~~~~~~~~~~~---- 209 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHT-EELLR----LGAA---YVIDTSTAPLYETVMELT---- 209 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT----
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh----CCCc---EEEeCCcccHHHHHHHHh----
Confidence 468899999886 4556655544 677 799999999887 77764 4543 2233 23333333221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
....+|+||-.- + .....+.+ +.|+++|++++.-.
T Consensus 210 ~~~g~Dvvid~~----g-~~~~~~~~---~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 210 NGIGADAAIDSI----G-GPDGNELA---FSLRPNGHFLTIGL 244 (340)
T ss_dssp TTSCEEEEEESS----C-HHHHHHHH---HTEEEEEEEEECCC
T ss_pred CCCCCcEEEECC----C-ChhHHHHH---HHhcCCCEEEEEee
Confidence 134699998753 1 12223333 27899999887543
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.21 E-value=0.62 Score=43.65 Aligned_cols=96 Identities=11% Similarity=0.005 Sum_probs=56.0
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE-----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT-----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~-----gD~~~~l~~~~~~~ 226 (317)
.++++||-.|+|. |.+++.+++ +|+.+|+++|.+++.+ +.++ .+|.+ .++. .|+.+.+....
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~~~~~~~~--- 258 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAK----EVGAT---ECVNPQDYKKPIQEVLTEMS--- 258 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH----HTTCS---EEECGGGCSSCHHHHHHHHT---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH----HhCCc---eEecccccchhHHHHHHHHh---
Confidence 4688999998643 333444343 6776899999999887 7765 35653 2232 12333333321
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCC-eEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKD-SFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpg-G~ivv~~ 269 (317)
.+.+|+||-.-. . ...++... +.|+++ |++++.-
T Consensus 259 --~~g~D~vid~~g----~-~~~~~~~~--~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 259 --NGGVDFSFEVIG----R-LDTMVTAL--SCCQEAYGVSVIVG 293 (374)
T ss_dssp --TSCBSEEEECSC----C-HHHHHHHH--HHBCTTTCEEEECS
T ss_pred --CCCCcEEEECCC----C-HHHHHHHH--HHhhcCCcEEEEec
Confidence 237999986421 1 12233322 268999 9987643
No 346
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.99 E-value=0.5 Score=43.51 Aligned_cols=95 Identities=15% Similarity=0.047 Sum_probs=58.0
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||-.|| |.|...+.+++ .|+ +|++++.+++.+ +.+.+ .+|.. .++. .|..+.+....
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~---- 215 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKC-RFLVE---ELGFD---GAIDYKNEDLAAGLKREC---- 215 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH---TTCCS---EEEETTTSCHHHHHHHHC----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH---HcCCC---EEEECCCHHHHHHHHHhc----
Confidence 46889999887 44555555444 577 899999999887 76632 34542 2232 23333333221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+.+|+||-+- +. ..++... +.|+++|.+++.-
T Consensus 216 -~~~~d~vi~~~----g~--~~~~~~~--~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 -PKGIDVFFDNV----GG--EILDTVL--TRIAFKARIVLCG 248 (336)
T ss_dssp -TTCEEEEEESS----CH--HHHHHHH--TTEEEEEEEEECC
T ss_pred -CCCceEEEECC----Cc--chHHHHH--HHHhhCCEEEEEe
Confidence 34699988753 11 2344333 4899999988753
No 347
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.83 E-value=1.7 Score=39.93 Aligned_cols=101 Identities=11% Similarity=-0.072 Sum_probs=59.9
Q ss_pred CCCCeEEEECCCcc-hHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGTG-SVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGtG-~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++++||=.|+|.+ .+++..+ ..++.+|+++|.+++.+ +.++ .+|...-+..-..|..+.+.... ....
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~~~----~~Ga~~~i~~~~~~~~~~v~~~t----~g~g 232 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL-NLAK----KIGADVTINSGDVNPVDEIKKIT----GGLG 232 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH-HHHH----HTTCSEEEEC-CCCHHHHHHHHT----TSSC
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh-hhhh----hcCCeEEEeCCCCCHHHHhhhhc----CCCC
Confidence 46889999988764 3333333 45677899999999987 7765 34543222222345444444332 2345
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|.++.+.. . ...+.... ..++++|.+++.-.
T Consensus 233 ~d~~~~~~~----~-~~~~~~~~--~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 233 VQSAIVCAV----A-RIAFEQAV--ASLKPMGKMVAVAV 264 (348)
T ss_dssp EEEEEECCS----C-HHHHHHHH--HTEEEEEEEEECCC
T ss_pred ceEEEEecc----C-cchhheeh--eeecCCceEEEEec
Confidence 788887642 1 22333322 27899999887543
No 348
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.83 E-value=0.68 Score=43.67 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=56.1
Q ss_pred CCCCeEEEECCC-cchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEec---HHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSG-TGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR---VETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcG-tG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD---~~~~l~~~~~~~~~ 228 (317)
.++++||-.||| .|.+++.+++ .|+.+|++++.+++.+ +.++ .+|.+ .++..+ -.++......+. .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~~~~v~~~~-~ 264 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAE----EIGAD---LTLNRRETSVEERRKAIMDIT-H 264 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHH----HTTCS---EEEETTTSCHHHHHHHHHHHT-T
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHH----HcCCc---EEEeccccCcchHHHHHHHHh-C
Confidence 468899999853 2333344343 5756899999999987 7775 35653 234332 223322221111 1
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...+|+||-.-... ..+...++ .|+++|++++.-
T Consensus 265 g~g~Dvvid~~g~~-~~~~~~~~------~l~~~G~iv~~G 298 (380)
T 1vj0_A 265 GRGADFILEATGDS-RALLEGSE------LLRRGGFYSVAG 298 (380)
T ss_dssp TSCEEEEEECSSCT-THHHHHHH------HEEEEEEEEECC
T ss_pred CCCCcEEEECCCCH-HHHHHHHH------HHhcCCEEEEEe
Confidence 23699998653211 12222222 579999988654
No 349
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.77 E-value=0.76 Score=42.49 Aligned_cols=96 Identities=11% Similarity=-0.016 Sum_probs=58.0
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~~ 227 (317)
.++++||-.|+ |.|...+.+++ .|+ +|++++.+++.+ +.+++ +|.. .++.. |+.+.+....
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~-~~~~~----~ga~---~~~d~~~~~~~~~~~~~~---- 231 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKL-RRAKA----LGAD---ETVNYTHPDWPKEVRRLT---- 231 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTSTTHHHHHHHHT----
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHh----cCCC---EEEcCCcccHHHHHHHHh----
Confidence 46889999997 55666666554 676 799999999987 77753 4542 12322 2222222221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
....+|+||-.-. ...+...++ .|+++|.++..-.
T Consensus 232 ~~~~~d~vi~~~g--~~~~~~~~~------~l~~~G~~v~~g~ 266 (343)
T 2eih_A 232 GGKGADKVVDHTG--ALYFEGVIK------ATANGGRIAIAGA 266 (343)
T ss_dssp TTTCEEEEEESSC--SSSHHHHHH------HEEEEEEEEESSC
T ss_pred CCCCceEEEECCC--HHHHHHHHH------hhccCCEEEEEec
Confidence 1246999997642 123333333 5789998876543
No 350
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.64 E-value=0.49 Score=43.92 Aligned_cols=97 Identities=13% Similarity=-0.011 Sum_probs=56.3
Q ss_pred CCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~~~ 229 (317)
++++||-.|+|. |..++.+++ .|+.+|+++|.+++.+ +.+++ +|.+ .++. .|+.+.+.... ..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~----~g 234 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAKK----VGAD---YVINPFEEDVVKEVMDIT----DG 234 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHHH----HTCS---EEECTTTSCHHHHHHHHT----TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH----hCCC---EEECCCCcCHHHHHHHHc----CC
Confidence 688999999832 333344333 6775799999999887 77753 4542 1232 23333333221 12
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
..+|+||-.-. . ...++... +.|+++|+++..-.
T Consensus 235 ~g~D~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 235 NGVDVFLEFSG----A-PKALEQGL--QAVTPAGRVSLLGL 268 (348)
T ss_dssp SCEEEEEECSC----C-HHHHHHHH--HHEEEEEEEEECCC
T ss_pred CCCCEEEECCC----C-HHHHHHHH--HHHhcCCEEEEEcc
Confidence 36999986532 1 12333322 26789999886543
No 351
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.40 E-value=0.85 Score=42.63 Aligned_cols=96 Identities=14% Similarity=-0.043 Sum_probs=57.3
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~~~ 228 (317)
.++++||=.|||. |.+++.+++ .|+ +|+++|.+++.+ +.++ .+|.+ .++.. |+.+.+.... .
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~v~~~~----~ 254 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKL-DRAF----ALGAD---HGINRLEEDWVERVYALT----G 254 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHH----HHTCS---EEEETTTSCHHHHHHHHH----T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhH-HHHH----HcCCC---EEEcCCcccHHHHHHHHh----C
Confidence 4688999998543 334444443 576 799999999887 7764 35653 23332 3333333322 1
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+..+|+||-.-. ...+...++ .|+++|.+++.-.
T Consensus 255 g~g~D~vid~~g--~~~~~~~~~------~l~~~G~iv~~G~ 288 (363)
T 3uog_A 255 DRGADHILEIAG--GAGLGQSLK------AVAPDGRISVIGV 288 (363)
T ss_dssp TCCEEEEEEETT--SSCHHHHHH------HEEEEEEEEEECC
T ss_pred CCCceEEEECCC--hHHHHHHHH------HhhcCCEEEEEec
Confidence 346999986432 123333333 5799999887643
No 352
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.73 E-value=1.3 Score=41.15 Aligned_cols=98 Identities=13% Similarity=-0.023 Sum_probs=55.2
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe----cHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV----RVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g----D~~~~l~~~~~~~~ 227 (317)
.++++||-.|+|. |.+++.+++ .|+ +|+++|.+++.+ +.++ .+|.+ .++.. |..+.+.... ..
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~----~lGa~---~~~~~~~~~~~~~~i~~~~--~~ 235 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRL-EVAK----NCGAD---VTLVVDPAKEEESSIIERI--RS 235 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHH----HTTCS---EEEECCTTTSCHHHHHHHH--HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHH-HHHH----HhCCC---EEEcCcccccHHHHHHHHh--cc
Confidence 4688999998743 444444443 576 499999999987 7775 35653 22321 2222222111 00
Q ss_pred -CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 -KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 -~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-... . ...++... +.|+++|.+++.-
T Consensus 236 ~~g~g~D~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~G 271 (352)
T 1e3j_A 236 AIGDLPNVTIDCSG----N-EKCITIGI--NITRTGGTLMLVG 271 (352)
T ss_dssp HSSSCCSEEEECSC----C-HHHHHHHH--HHSCTTCEEEECS
T ss_pred ccCCCCCEEEECCC----C-HHHHHHHH--HHHhcCCEEEEEe
Confidence 0246999986532 1 22233322 2689999988753
No 353
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=89.33 E-value=1.6 Score=40.31 Aligned_cols=95 Identities=7% Similarity=-0.022 Sum_probs=55.8
Q ss_pred CCCeEEEECCCc-chHHHHHHH-c--CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH-HHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGT-GSVGIEAIS-R--GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV-ETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGt-G~l~Ieaas-~--Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~-~~~l~~~~~~~~~~ 229 (317)
++++||-.|+|. |.+++.+++ . |+ +|+++|.+++.+ +.+++ +|.+ .++..+- .++..... ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~vi~~~~~~~~~~~~~----~g 236 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHR-DFALE----LGAD---YVSEMKDAESLINKLT----DG 236 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHH-HHHHH----HTCS---EEECHHHHHHHHHHHH----TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHH-HHHHH----hCCC---EEeccccchHHHHHhh----cC
Confidence 688999999842 344444443 5 76 699999999987 77753 5643 2332221 23333332 12
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+|+||-.-. . ...++... +.|+++|.+++.-
T Consensus 237 ~g~D~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~g 269 (344)
T 2h6e_A 237 LGASIAIDLVG----T-EETTYNLG--KLLAQEGAIILVG 269 (344)
T ss_dssp CCEEEEEESSC----C-HHHHHHHH--HHEEEEEEEEECC
T ss_pred CCccEEEECCC----C-hHHHHHHH--HHhhcCCEEEEeC
Confidence 36999986531 1 22333322 2689999988654
No 354
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=89.15 E-value=1 Score=41.65 Aligned_cols=94 Identities=13% Similarity=0.046 Sum_probs=55.5
Q ss_pred CCCCeEEEECCC-cchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYSG-TGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgcG-tG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~~ 228 (317)
.++++||-.|+| .|..++.++ ..|+ +|+++|.+++.+ +.+++ +|.. .++. .|..+.+....
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~~~d~~~~~~~~~~~~~~----- 228 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKL-ELAKE----LGAD---LVVNPLKEDAAKFMKEKV----- 228 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHH----TTCS---EEECTTTSCHHHHHHHHH-----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHH----CCCC---EEecCCCccHHHHHHHHh-----
Confidence 468899999984 244444444 3676 899999999987 77753 5542 1222 23322222221
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+.+|+||-.-. . ...++... +.|+++|+++..-
T Consensus 229 -~~~d~vid~~g----~-~~~~~~~~--~~l~~~G~~v~~g 261 (339)
T 1rjw_A 229 -GGVHAAVVTAV----S-KPAFQSAY--NSIRRGGACVLVG 261 (339)
T ss_dssp -SSEEEEEESSC----C-HHHHHHHH--HHEEEEEEEEECC
T ss_pred -CCCCEEEECCC----C-HHHHHHHH--HHhhcCCEEEEec
Confidence 46999987532 1 12333322 2689999988654
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.96 E-value=0.74 Score=42.41 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=57.3
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE----ecHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT----VRVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~----gD~~~~l~~~~~~~ 226 (317)
.++++||-.|| |.|...+.+++ .|+ +|++++.+++.+ +.+++. +|.. . ++. .|+.+.+....
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~-~~~~~~---~g~~--~-~~d~~~~~~~~~~~~~~~--- 222 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKV-DLLKTK---FGFD--D-AFNYKEESDLTAALKRCF--- 222 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHT---SCCS--E-EEETTSCSCSHHHHHHHC---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHH---cCCc--e-EEecCCHHHHHHHHHHHh---
Confidence 46889999986 45555555444 676 799999999887 777532 3542 1 222 13333333321
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
...+|+||-+- +. ..++... +.|+++|.+++.
T Consensus 223 --~~~~d~vi~~~----g~--~~~~~~~--~~l~~~G~~v~~ 254 (345)
T 2j3h_A 223 --PNGIDIYFENV----GG--KMLDAVL--VNMNMHGRIAVC 254 (345)
T ss_dssp --TTCEEEEEESS----CH--HHHHHHH--TTEEEEEEEEEC
T ss_pred --CCCCcEEEECC----CH--HHHHHHH--HHHhcCCEEEEE
Confidence 24699998763 11 2344333 478999998864
No 356
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.90 E-value=0.85 Score=46.36 Aligned_cols=167 Identities=8% Similarity=-0.098 Sum_probs=92.0
Q ss_pred eEEecCCCCCCCCChHHHHHHHHHHHhhcCC---C-CCCCCCCeEEEECCCcchHHHHHHHc-----------CC--CEE
Q 021116 119 KKLLSPKGMDVRPMMEVVKGAAFDILQSAGG---C-PASLRPGRWLDLYSGTGSVGIEAISR-----------GC--SEV 181 (317)
Q Consensus 119 ~~l~~p~~~~~rpt~~~v~~alf~~L~~~~~---~-~~~~~~~rVLDlgcGtG~l~Ieaas~-----------Ga--~~V 181 (317)
..+....+..++....-+.|+..-.+..... . ....+.-+|+|+|-|||...+.++.. .. -++
T Consensus 26 ~~~s~~~~~~y~s~~~~~~e~~~vf~~~~~l~~~~~~~~~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~ 105 (676)
T 3ps9_A 26 TPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHF 105 (676)
T ss_dssp CCEETTTTEESSCTTTHHHHHHHHTTGGGTHHHHGGGCSSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEE
T ss_pred CccCccCCCcccCCcCHHHhhHhhhhccCChhHHHHhCCCCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEE
Confidence 3333344444555555556665433332100 0 00123358999999999888765432 11 268
Q ss_pred EEEeC---CHHHHHHHHHH-----------hHHHh-----CC-----C---CceEEEEecHHHHHHHHhhhcCCCCCccE
Q 021116 182 HFVEM---DPWVVSNVLIP-----------NLEWT-----GF-----L---DVSSIHTVRVETFLERAEQFVGKDGPFDY 234 (317)
Q Consensus 182 ~aVDi---n~~al~~~ar~-----------N~~~~-----gl-----~---~~v~ii~gD~~~~l~~~~~~~~~~~~fDl 234 (317)
+.+|. +++.+ +.+-. -++.. |+ + -.++++.+|+.+.+..+.. .....||+
T Consensus 106 ~s~E~~p~~~~~l-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~--~~~~~~d~ 182 (676)
T 3ps9_A 106 ISFEKFPLTRADL-ALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDD--SLNQKVDA 182 (676)
T ss_dssp EEEESSCCCHHHH-HHHHTTCGGGHHHHHHHHHHCCCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCG--GGTTCEEE
T ss_pred EEEeCCCCCHHHH-HHHHHhChhhHHHHHHHHHhCcccCCCceEEEecCCcEEEEEecCCHHHHHHhccc--ccCCcccE
Confidence 99999 77666 42221 11111 10 1 1356788999888754310 01357999
Q ss_pred EEECCCCCCc----c-HHHHHHHHHHcCCcCCCeEEEEEeCCCCCcc--ccCCCeEEEEEeecCc
Q 021116 235 MSVTPPYTAV----D-YEVLMAQISKSALVGKDSFIVVEYPLRTDML--DTCGCLVKIKDRRFGR 292 (317)
Q Consensus 235 V~~dPPy~~~----~-~~~~l~~L~~~~lLkpgG~ivv~~~~~~~l~--~~~~~~~~~~~r~yG~ 292 (317)
||+|+ |... . -.+++..+. +++++||.+...+.. ..+. ....||.+.+-+.+|.
T Consensus 183 ~~~D~-f~p~~np~~w~~~~~~~l~--~~~~~g~~~~t~~~~-~~vr~~L~~aGf~v~~~~~~g~ 243 (676)
T 3ps9_A 183 WFLDG-FAPAKNPDMWTQNLFNAMA--RLARPGGTLATFTSA-GFVRRGLQDAGFTMQKRKGFGR 243 (676)
T ss_dssp EEECC-SCGGGCGGGSCHHHHHHHH--HHEEEEEEEEESCCC-HHHHHHHHHHTCEEEEEECSTT
T ss_pred EEECC-CCCcCChhhhhHHHHHHHH--HHhCCCCEEEeccCc-HHHHHHHHhCCeEEEecccccc
Confidence 99997 4321 1 256677775 378999988765432 2211 1246787766666764
No 357
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=88.81 E-value=3 Score=37.53 Aligned_cols=82 Identities=13% Similarity=0.020 Sum_probs=54.6
Q ss_pred CCCCeEEEECCCcch---HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH---HhhhcC
Q 021116 154 LRPGRWLDLYSGTGS---VGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~---l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~---~~~~~~ 227 (317)
++++.+|=-|++.|. ++..+++.|+ +|+.+|.+++.+ +.+.+.++..|. ++.++.+|+.+...- ..+...
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~-~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRL-NQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHH-HHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHH
Confidence 578889988877763 2333456776 699999999998 777777777664 478889887543210 000001
Q ss_pred CCCCccEEEECC
Q 021116 228 KDGPFDYMSVTP 239 (317)
Q Consensus 228 ~~~~fDlV~~dP 239 (317)
.-+..|+++.|.
T Consensus 81 ~~G~iDiLVNNA 92 (254)
T 4fn4_A 81 TYSRIDVLCNNA 92 (254)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 126789999764
No 358
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.46 E-value=1.7 Score=39.83 Aligned_cols=95 Identities=7% Similarity=-0.109 Sum_probs=55.4
Q ss_pred CCCCeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||-.|+ |.|...+.++ ..|+ +|+++|.+++.+ +.+++ +|.. .++. .|..+.+....
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~-~~~~~----~g~~---~~~d~~~~~~~~~i~~~~---- 210 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKA-ETARK----LGCH---HTINYSTQDFAEVVREIT---- 210 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHH----
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCC---EEEECCCHHHHHHHHHHh----
Confidence 46789998885 4555555544 4676 799999999887 77754 3542 1222 12222222221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-+-.- .. ++... +.|+++|.+++.-
T Consensus 211 ~~~~~d~vi~~~g~--~~----~~~~~--~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIGK--DT----LQKSL--DCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSCT--TT----HHHHH--HTEEEEEEEEECC
T ss_pred CCCCCeEEEECCcH--HH----HHHHH--HhhccCCEEEEEe
Confidence 12469999976421 12 22222 2689999987654
No 359
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.46 E-value=0.72 Score=42.72 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=56.3
Q ss_pred CCCCeEEEECCC--cchHHHHHH-Hc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhc
Q 021116 154 LRPGRWLDLYSG--TGSVGIEAI-SR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcG--tG~l~Ieaa-s~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~ 226 (317)
.++++||-.|+| .|...+.++ .. |+ +|+++|.+++.+ +.+++ +|.. .++.. |..+.+....
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~-~~~~~----~g~~---~~~~~~~~~~~~~~~~~~--- 236 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAV-EAAKR----AGAD---YVINASMQDPLAEIRRIT--- 236 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT---
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHH-HHHHH----hCCC---EEecCCCccHHHHHHHHh---
Confidence 468899999987 344444444 35 76 799999999887 77743 4542 12221 2222222221
Q ss_pred CCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 227 GKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 227 ~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+.+|+||-.-. . ...++... +.|+++|.+++.-
T Consensus 237 -~~~~~d~vi~~~g----~-~~~~~~~~--~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 -ESKGVDAVIDLNN----S-EKTLSVYP--KALAKQGKYVMVG 271 (347)
T ss_dssp -TTSCEEEEEESCC----C-HHHHTTGG--GGEEEEEEEEECC
T ss_pred -cCCCceEEEECCC----C-HHHHHHHH--HHHhcCCEEEEEC
Confidence 1147999987631 1 22333322 4789999988753
No 360
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=88.32 E-value=1.2 Score=41.65 Aligned_cols=96 Identities=13% Similarity=0.089 Sum_probs=55.8
Q ss_pred CCCeEEEEC-C-CcchHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 155 RPGRWLDLY-S-GTGSVGIEAISR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 155 ~~~rVLDlg-c-GtG~l~Ieaas~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
++++||=.| + |.|.+++.+++. ++.+|+++|.+++.+ +.+++ +|.+ .++..+ .++......+ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~~~----lGad---~vi~~~-~~~~~~v~~~--~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWVKS----LGAH---HVIDHS-KPLAAEVAAL--GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHH----TTCS---EEECTT-SCHHHHHHTT--CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHH----cCCC---EEEeCC-CCHHHHHHHh--cCCC
Confidence 577888886 3 335555666664 556899999999987 77754 5653 223211 1122222211 2357
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
+|+||-.- + ....++... +.|+++|.+++.
T Consensus 240 ~Dvvid~~----g-~~~~~~~~~--~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTT----H-TDKHAAEIA--DLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECS----C-HHHHHHHHH--HHSCTTCEEEEC
T ss_pred ceEEEECC----C-chhhHHHHH--HHhcCCCEEEEE
Confidence 99887642 1 122333332 268999999875
No 361
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.15 E-value=1.2 Score=41.15 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=55.7
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEec--HHHHHHHHhhhcCC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVR--VETFLERAEQFVGK 228 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD--~~~~l~~~~~~~~~ 228 (317)
.++++||=.|+ |.|.+++.+++ .|+ +|++++.+++.+ +.+++ +|.+ .++..+ ..+.+.... .
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~ga~---~v~~~~~~~~~~v~~~~----~ 224 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAAT-EFVKS----VGAD---IVLPLEEGWAKAVREAT----G 224 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHH----HTCS---EEEESSTTHHHHHHHHT----T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh----cCCc---EEecCchhHHHHHHHHh----C
Confidence 46889998876 34555555444 576 899999999887 77764 4543 233333 333332221 1
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...+|+||-.-. ... ++... +.|+++|.+++.-
T Consensus 225 ~~g~Dvvid~~g--~~~----~~~~~--~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIG--GPA----FDDAV--RTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC----C----HHHHH--HTEEEEEEEEEC-
T ss_pred CCCceEEEECCc--hhH----HHHHH--HhhcCCCEEEEEE
Confidence 236999986532 112 22222 2689999988653
No 362
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.06 E-value=1 Score=41.35 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=56.2
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||=.|+ |.|..++.+++ .|+ +|++++.+++.+ +.+++ +|.. .++. .|..+.+....
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~ga~---~~~~~~~~~~~~~~~~~~---- 213 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKL-KIAKE----YGAE---YLINASKEDILRQVLKFT---- 213 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHHHT----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCc---EEEeCCCchHHHHHHHHh----
Confidence 46889998874 33444444443 576 799999999987 77654 4542 2333 23333333221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
....+|+||-.-. ...+...++ .|+++|.++..-.
T Consensus 214 ~~~g~D~vid~~g--~~~~~~~~~------~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 214 NGKGVDASFDSVG--KDTFEISLA------ALKRKGVFVSFGN 248 (334)
T ss_dssp TTSCEEEEEECCG--GGGHHHHHH------HEEEEEEEEECCC
T ss_pred CCCCceEEEECCC--hHHHHHHHH------HhccCCEEEEEcC
Confidence 1346999987532 112222222 5899999887543
No 363
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.76 E-value=1.1 Score=40.90 Aligned_cols=96 Identities=7% Similarity=-0.038 Sum_probs=55.0
Q ss_pred CCCCeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||-.|+ |.|...+.++ ..|+ +|+++|.+++.+ +.+++ +|.. .++. .|..+.+....
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~-~~~~~----~g~~---~~~~~~~~~~~~~~~~~~---- 205 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKA-QSALK----AGAW---QVINYREEDLVERLKEIT---- 205 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHH----cCCC---EEEECCCccHHHHHHHHh----
Confidence 46789998873 3444444433 3676 799999999887 77754 3542 1222 12222222221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
....+|+||-+-. . ..++... +.|+++|.+++.-.
T Consensus 206 ~~~~~D~vi~~~g--~----~~~~~~~--~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 206 GGKKVRVVYDSVG--R----DTWERSL--DCLQRRGLMVSFGN 240 (327)
T ss_dssp TTCCEEEEEECSC--G----GGHHHHH--HTEEEEEEEEECCC
T ss_pred CCCCceEEEECCc--h----HHHHHHH--HHhcCCCEEEEEec
Confidence 1246999997642 1 1233322 26899999886543
No 364
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.74 E-value=1.8 Score=40.59 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=55.9
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++++||-.|+|. |.+++.+++ .|+ +|+++|.+++.+ +.+++ +|.+ .++..+-.++.... ...
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~-~~a~~----lGa~---~vi~~~~~~~~~~~------~~g 257 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKR-EAAKA----LGAD---EVVNSRNADEMAAH------LKS 257 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHH----HTCS---EEEETTCHHHHHTT------TTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCc---EEeccccHHHHHHh------hcC
Confidence 4688999998753 444444444 576 599999999887 77753 5653 23332222333222 146
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
+|+||-.-.- ...+...+ +.|+++|.++..-
T Consensus 258 ~Dvvid~~g~-~~~~~~~~------~~l~~~G~iv~~G 288 (369)
T 1uuf_A 258 FDFILNTVAA-PHNLDDFT------TLLKRDGTMTLVG 288 (369)
T ss_dssp EEEEEECCSS-CCCHHHHH------TTEEEEEEEEECC
T ss_pred CCEEEECCCC-HHHHHHHH------HHhccCCEEEEec
Confidence 9999864321 11222222 3789999988643
No 365
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.48 E-value=2.1 Score=39.96 Aligned_cols=94 Identities=14% Similarity=0.037 Sum_probs=56.4
Q ss_pred CCCCeEEEEC--CCcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLY--SGTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlg--cGtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||-.| .|.|..++.+++ .|+ +|++++.+++.+ +.+++ +|.+ .++. .|+.+.+...
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~~~~~----- 227 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKS-AFLKS----LGCD---RPINYKTEPVGTVLKQE----- 227 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----TTCS---EEEETTTSCHHHHHHHH-----
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHH-HHHHH----cCCc---EEEecCChhHHHHHHHh-----
Confidence 4688999988 345555555444 576 799999999887 77754 5643 2232 2333333222
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-.-. . ..++... +.|+++|.+++.-
T Consensus 228 ~~~g~D~vid~~g----~--~~~~~~~--~~l~~~G~iv~~g 261 (362)
T 2c0c_A 228 YPEGVDVVYESVG----G--AMFDLAV--DALATKGRLIVIG 261 (362)
T ss_dssp CTTCEEEEEECSC----T--HHHHHHH--HHEEEEEEEEECC
T ss_pred cCCCCCEEEECCC----H--HHHHHHH--HHHhcCCEEEEEe
Confidence 1246999987532 1 2333332 2688999887654
No 366
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.44 E-value=1.1 Score=41.07 Aligned_cols=97 Identities=10% Similarity=-0.105 Sum_probs=56.9
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||=.|+ |.|..++.+++ .|+ +|++++.+++.+ +.+++ +|.. .++. .|..+.+....
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~---- 205 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKA-AHAKA----LGAW---ETIDYSHEDVAKRVLELT---- 205 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHT----
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCC---EEEeCCCccHHHHHHHHh----
Confidence 46889988762 33444444443 577 799999999987 77763 4542 2233 23333332221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
....+|+||-.-. . ..++... +.|+++|++++.-..
T Consensus 206 ~~~g~Dvvid~~g----~--~~~~~~~--~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 206 DGKKCPVVYDGVG----Q--DTWLTSL--DSVAPRGLVVSFGNA 241 (325)
T ss_dssp TTCCEEEEEESSC----G--GGHHHHH--TTEEEEEEEEECCCT
T ss_pred CCCCceEEEECCC----h--HHHHHHH--HHhcCCCEEEEEecC
Confidence 2346999886531 1 1233222 478999999876543
No 367
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=87.33 E-value=2 Score=40.02 Aligned_cols=95 Identities=8% Similarity=0.000 Sum_probs=54.8
Q ss_pred CCCCeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~~ 227 (317)
.++++||-.|+ |.|...+.++ ..|+ +|++++.+++.+ +.++ .+|.. .++.. |..+.+....
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~----~~ga~---~~~d~~~~~~~~~~~~~~---- 235 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQ-KIVL----QNGAH---EVFNHREVNYIDKIKKYV---- 235 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHH----HTTCS---EEEETTSTTHHHHHHHHH----
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHH-HHHH----HcCCC---EEEeCCCchHHHHHHHHc----
Confidence 46889999986 3444444444 3676 799999999887 7654 34542 12222 2222222221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-+. +. . .+.... +.|+++|.+++.-
T Consensus 236 ~~~~~D~vi~~~----G~-~-~~~~~~--~~l~~~G~iv~~g 269 (351)
T 1yb5_A 236 GEKGIDIIIEML----AN-V-NLSKDL--SLLSHGGRVIVVG 269 (351)
T ss_dssp CTTCEEEEEESC----HH-H-HHHHHH--HHEEEEEEEEECC
T ss_pred CCCCcEEEEECC----Ch-H-HHHHHH--HhccCCCEEEEEe
Confidence 123699998763 11 1 233222 3689999988654
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.24 E-value=1.6 Score=40.47 Aligned_cols=95 Identities=14% Similarity=-0.013 Sum_probs=54.8
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||=.|+ |.|..++.+++ .|+ +|++++.+++.+ +.+++ +|.. .++. .|..+.+....
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~~~~~~~~~~~~~~~~~~---- 232 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKC-EACER----LGAK---RGINYRSEDFAAVIKAET---- 232 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH----HTCS---EEEETTTSCHHHHHHHHH----
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh----cCCC---EEEeCCchHHHHHHHHHh----
Confidence 46788887742 23444444443 576 799999999988 77764 4543 2233 23333332221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
...+|+||-.-. ... ++... +.|+++|.+++.-.
T Consensus 233 -~~g~Dvvid~~g--~~~----~~~~~--~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 233 -GQGVDIILDMIG--AAY----FERNI--ASLAKDGCLSIIAF 266 (353)
T ss_dssp -SSCEEEEEESCC--GGG----HHHHH--HTEEEEEEEEECCC
T ss_pred -CCCceEEEECCC--HHH----HHHHH--HHhccCCEEEEEEe
Confidence 357999987532 112 22222 26899999887543
No 369
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=87.14 E-value=3.8 Score=37.49 Aligned_cols=102 Identities=10% Similarity=0.045 Sum_probs=58.8
Q ss_pred CCCCeEEEECCCc-chHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++++||=.|+|. |.+++.++ ..|+..++++|.+++.+ +.++ .+|...-+.....|..+...... ....
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~-~~a~----~lGa~~~i~~~~~~~~~~~~~~~----~~~g 229 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKL-ALAK----SFGAMQTFNSSEMSAPQMQSVLR----ELRF 229 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHH----HTTCSEEEETTTSCHHHHHHHHG----GGCS
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHH-HHHH----HcCCeEEEeCCCCCHHHHHHhhc----ccCC
Confidence 4688999888754 23333333 46888889999999987 7775 45754211111234444444332 1245
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
+|+|+-.- +. ...++... +.++++|.+++.-..
T Consensus 230 ~d~v~d~~----G~-~~~~~~~~--~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 230 NQLILETA----GV-PQTVELAV--EIAGPHAQLALVGTL 262 (346)
T ss_dssp SEEEEECS----CS-HHHHHHHH--HHCCTTCEEEECCCC
T ss_pred cccccccc----cc-cchhhhhh--heecCCeEEEEEecc
Confidence 78777542 11 22333322 268999998875443
No 370
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=86.82 E-value=0.42 Score=43.82 Aligned_cols=70 Identities=11% Similarity=0.003 Sum_probs=41.6
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCC----c---c----------HHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTA----V---D----------YEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~----~---~----------~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
++++.+.|..+.+... +.=|+|++||||.. . . +.++.+.+.. +-+.|+.++++.
T Consensus 157 ~v~i~~~Df~~~i~~~-------~~~~fvY~DPPY~~~~~~~~f~~Y~~~~F~~~dh~~L~~~l~~--l~~~~~~~~lS~ 227 (278)
T 2g1p_A 157 NAFFYCESYADSMARA-------DDSSVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEG--LVERHIPVLISN 227 (278)
T ss_dssp GEEEEECCHHHHHTTC-------CTTEEEEECCSCCCC-----------CCCCHHHHHHHHHHHHH--HHHTTCCEEEEE
T ss_pred CcEEEeCCHHHHHHhc-------CCCCEEEeCCcccccCCCCCccccccCCCCHHHHHHHHHHHHH--HHhcCCeEEEEc
Confidence 4788899988877532 24589999999942 1 1 2233333332 124467787777
Q ss_pred CCCCCccccCCCeEEE
Q 021116 270 PLRTDMLDTCGCLVKI 285 (317)
Q Consensus 270 ~~~~~l~~~~~~~~~~ 285 (317)
.....+.++-.+|.+.
T Consensus 228 ~d~~~i~~ly~~~~i~ 243 (278)
T 2g1p_A 228 HDTMLTREWYQRAKLH 243 (278)
T ss_dssp ECCHHHHHHTTTSEEE
T ss_pred CCCHHHHHHhcCCcEE
Confidence 6554444444566553
No 371
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=85.10 E-value=2.9 Score=38.68 Aligned_cols=95 Identities=16% Similarity=0.039 Sum_probs=55.5
Q ss_pred CCC--CeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhh
Q 021116 154 LRP--GRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQF 225 (317)
Q Consensus 154 ~~~--~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~ 225 (317)
.++ ++||-.|+ |.|...+.++ ..|+.+|++++.+++.+ +.+++. +|.. .++. .|..+.+....
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~-~~~~~~---~g~~---~~~d~~~~~~~~~~~~~~-- 227 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC-ILLTSE---LGFD---AAINYKKDNVAEQLRESC-- 227 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHT---SCCS---EEEETTTSCHHHHHHHHC--
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHH---cCCc---eEEecCchHHHHHHHHhc--
Confidence 357 89999886 3334444433 36765899999999887 666542 3542 1222 12323332221
Q ss_pred cCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEE
Q 021116 226 VGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 226 ~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
.+.+|+||-+- +. ..++... +.|+++|++++.
T Consensus 228 ---~~~~d~vi~~~----G~--~~~~~~~--~~l~~~G~iv~~ 259 (357)
T 2zb4_A 228 ---PAGVDVYFDNV----GG--NISDTVI--SQMNENSHIILC 259 (357)
T ss_dssp ---TTCEEEEEESC----CH--HHHHHHH--HTEEEEEEEEEC
T ss_pred ---CCCCCEEEECC----CH--HHHHHHH--HHhccCcEEEEE
Confidence 22699998764 11 3344333 378999998864
No 372
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.55 E-value=2.1 Score=39.47 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=55.3
Q ss_pred CCCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCC
Q 021116 154 LRPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGP 231 (317)
Q Consensus 154 ~~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~ 231 (317)
.++++||-.|+|. |.+++.+++ .|+ +|+++|.+++.+ +.+++ +|.+ .++ .|...+ ...
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~v~-~~~~~~----------~~~ 234 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKK-QDALS----MGVK---HFY-TDPKQC----------KEE 234 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTH-HHHHH----TTCS---EEE-SSGGGC----------CSC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHH-HHHHh----cCCC---eec-CCHHHH----------hcC
Confidence 4688999998743 444444444 576 799999999887 77753 5653 233 443221 137
Q ss_pred ccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 232 FDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 232 fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+|+||-.-.- ...+...+ +.|+++|.+++.-.
T Consensus 235 ~D~vid~~g~-~~~~~~~~------~~l~~~G~iv~~G~ 266 (348)
T 3two_A 235 LDFIISTIPT-HYDLKDYL------KLLTYNGDLALVGL 266 (348)
T ss_dssp EEEEEECCCS-CCCHHHHH------TTEEEEEEEEECCC
T ss_pred CCEEEECCCc-HHHHHHHH------HHHhcCCEEEEECC
Confidence 9999854321 11223222 37899999987643
No 373
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=84.44 E-value=2.3 Score=39.53 Aligned_cols=95 Identities=11% Similarity=-0.061 Sum_probs=53.7
Q ss_pred CCCCeEEEECC--CcchHHHHHH-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAI-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaa-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~~ 227 (317)
.++++||-.|+ |.|...+.++ ..|+ +|+++|.+++.+ +.++ .+|.. .++.. |..+.+....
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~----~~g~~---~~~~~~~~~~~~~~~~~~---- 227 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKL-QMAE----KLGAA---AGFNYKKEDFSEATLKFT---- 227 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHH----HHTCS---EEEETTTSCHHHHHHHHT----
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHH----HcCCc---EEEecCChHHHHHHHHHh----
Confidence 46789998874 3444444433 3576 799999999887 7763 24542 12222 2222222221
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
....+|+||-+-. ...+...+ +.|+++|.+++.-
T Consensus 228 ~~~~~d~vi~~~G--~~~~~~~~------~~l~~~G~iv~~G 261 (354)
T 2j8z_A 228 KGAGVNLILDCIG--GSYWEKNV------NCLALDGRWVLYG 261 (354)
T ss_dssp TTSCEEEEEESSC--GGGHHHHH------HHEEEEEEEEECC
T ss_pred cCCCceEEEECCC--chHHHHHH------HhccCCCEEEEEe
Confidence 1246999987642 11222222 2578999988754
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=83.96 E-value=0.94 Score=41.87 Aligned_cols=94 Identities=11% Similarity=0.066 Sum_probs=53.9
Q ss_pred CCCeEEEECCCc-chHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcCCC
Q 021116 155 RPGRWLDLYSGT-GSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVGKD 229 (317)
Q Consensus 155 ~~~rVLDlgcGt-G~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~~~ 229 (317)
++++||-.|+|. |.+++.+++ .|+.+|+++|.+++.+ +.+++- . + .++. .|+.+.+.... .
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~l-----a-~--~v~~~~~~~~~~~~~~~~-----~ 229 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARPY-----A-D--RLVNPLEEDLLEVVRRVT-----G 229 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTTT-----C-S--EEECTTTSCHHHHHHHHH-----S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-----H-H--hccCcCccCHHHHHHHhc-----C
Confidence 688999999732 333344333 6775799999999887 766532 1 2 1222 23333332221 2
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+|+||-.-. . ...++... +.|+++|.+++.-
T Consensus 230 ~g~D~vid~~g----~-~~~~~~~~--~~l~~~G~iv~~g 262 (343)
T 2dq4_A 230 SGVEVLLEFSG----N-EAAIHQGL--MALIPGGEARILG 262 (343)
T ss_dssp SCEEEEEECSC----C-HHHHHHHH--HHEEEEEEEEECC
T ss_pred CCCCEEEECCC----C-HHHHHHHH--HHHhcCCEEEEEe
Confidence 46999986532 1 12233322 2689999887654
No 375
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.80 E-value=11 Score=34.89 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=57.0
Q ss_pred CeEEEECCCcc--hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHH-------hCCCC----------ceEEEEecHHH
Q 021116 157 GRWLDLYSGTG--SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW-------TGFLD----------VSSIHTVRVET 217 (317)
Q Consensus 157 ~rVLDlgcGtG--~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~-------~gl~~----------~v~ii~gD~~~ 217 (317)
.+|-=+|+|+= .++..+++.|. +|+.+|.+++.+ +.++++++. .|+.+ ++++ ..|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~-~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQI-TGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHH-HHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHH
Confidence 46666666542 22223455676 599999999998 777654322 23211 2333 345443
Q ss_pred HHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 218 FLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 218 ~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.+ ...|+||..-|-.......++..+. ..++++.+|+...+
T Consensus 84 av----------~~aDlVieavpe~~~~k~~v~~~l~--~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 84 AV----------EGVVHIQECVPENLDLKRKIFAQLD--SIVDDRVVLSSSSS 124 (319)
T ss_dssp HT----------TTEEEEEECCCSCHHHHHHHHHHHH--TTCCSSSEEEECCS
T ss_pred HH----------hcCCEEEEeccCCHHHHHHHHHHHH--hhCCCCeEEEEeCC
Confidence 32 4579999987643223345666665 36788886654433
No 376
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.78 E-value=3.1 Score=37.52 Aligned_cols=91 Identities=12% Similarity=0.031 Sum_probs=54.9
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH-HHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV-ETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~-~~~l~~~~~~~~~~ 229 (317)
.++++||-.|+ |.|..++.+++ .|+ +|++++.+++.+ +.+++ +|.. .++..+- .++....
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~-~~~~~----~ga~---~~~~~~~~~~~~~~~------- 187 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKL-ALPLA----LGAE---EAATYAEVPERAKAW------- 187 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGS-HHHHH----TTCS---EEEEGGGHHHHHHHT-------
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHh----cCCC---EEEECCcchhHHHHh-------
Confidence 46889999986 34555555443 676 899999999887 76643 5642 2333221 2333221
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+|+||- -.- .. ++... +.++++|+++..-
T Consensus 188 ~~~d~vid-~g~--~~----~~~~~--~~l~~~G~~v~~g 218 (302)
T 1iz0_A 188 GGLDLVLE-VRG--KE----VEESL--GLLAHGGRLVYIG 218 (302)
T ss_dssp TSEEEEEE-CSC--TT----HHHHH--TTEEEEEEEEEC-
T ss_pred cCceEEEE-CCH--HH----HHHHH--HhhccCCEEEEEe
Confidence 46999887 422 22 23222 4789999987643
No 377
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=82.18 E-value=2.4 Score=38.84 Aligned_cols=82 Identities=10% Similarity=0.135 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhHHHhCCCCceEEE--EecHHHHHHHHhhhcCCCCCccEEEECCCCCC------------c-----cHHH
Q 021116 188 PWVVSNVLIPNLEWTGFLDVSSIH--TVRVETFLERAEQFVGKDGPFDYMSVTPPYTA------------V-----DYEV 248 (317)
Q Consensus 188 ~~al~~~ar~N~~~~gl~~~v~ii--~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~------------~-----~~~~ 248 (317)
++.+ ..+.+-++ ++++. ++|..+.+... ..=|+|++||||.. . ++.+
T Consensus 156 ~~~l-~~~~~~l~------~v~i~~~~~Df~~~i~~~-------~~~~fvY~DPPY~~~~~~~~f~~Y~~~~f~~~dh~~ 221 (284)
T 2dpm_A 156 EELI-SAISVYIN------NNQLEIKVGDFEKAIVDV-------RTGDFVYFDPPYIPLSETSAFTSYTHEGFSFADQVR 221 (284)
T ss_dssp HHHH-HHHHHHHH------HSEEEEEESCGGGGGTTC-------CTTCEEEECCCCCCC-----CCCCCCSSCCHHHHHH
T ss_pred HHHH-HHHHHHhC------CCEEEEeCCCHHHHHHhc-------CCCCEEEeCCCcccccCCCCccccccCCCCHHHHHH
Confidence 4555 44444443 25566 99999886432 34489999999942 0 1234
Q ss_pred HHHHHHHcCCcCCCeEEEEEeCCCCCccccCCCeEEE
Q 021116 249 LMAQISKSALVGKDSFIVVEYPLRTDMLDTCGCLVKI 285 (317)
Q Consensus 249 ~l~~L~~~~lLkpgG~ivv~~~~~~~l~~~~~~~~~~ 285 (317)
+.+.+.. +-+.|+.++++......+.++-.+|.+.
T Consensus 222 L~~~l~~--l~~~g~~~~lS~~d~~~i~~ly~~~~i~ 256 (284)
T 2dpm_A 222 LRDAFKR--LSDTGAYVMLSNSSSALVEELYKDFNIH 256 (284)
T ss_dssp HHHHHHH--HHTTTCEEEEEEESCHHHHHHTTTSEEE
T ss_pred HHHHHHH--HHhcCCEEEEEcCCCHHHHHHHcCCeEE
Confidence 4444432 2245788888877554444444556543
No 378
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=81.99 E-value=10 Score=33.36 Aligned_cols=83 Identities=14% Similarity=0.003 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.+...+....+.++.+|+.+... ...+...-
T Consensus 8 l~~k~~lVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~ 83 (267)
T 3t4x_A 8 LKGKTALVTGST-AGIGKAIATSLVAEGA-NVLINGRREENV-NETIKEIRAQYPDAILQPVVADLGTEQG-CQDVIEKY 83 (267)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHHCTTCEEEEEECCTTSHHH-HHHHHHHC
T ss_pred cCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhCCCceEEEEecCCCCHHH-HHHHHHhc
Confidence 567888877765 445443 456676 699999999887 6666666655433457788888754321 00000012
Q ss_pred CCccEEEECCC
Q 021116 230 GPFDYMSVTPP 240 (317)
Q Consensus 230 ~~fDlV~~dPP 240 (317)
+..|++|.+.-
T Consensus 84 g~id~lv~nAg 94 (267)
T 3t4x_A 84 PKVDILINNLG 94 (267)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998753
No 379
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.40 E-value=10 Score=28.14 Aligned_cols=71 Identities=17% Similarity=0.113 Sum_probs=45.5
Q ss_pred CCCeEEEECCCcchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH--HHHhhhcCC
Q 021116 155 RPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL--ERAEQFVGK 228 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Iea----as~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l--~~~~~~~~~ 228 (317)
.+.+|+=+|+ |.+|..+ +..|..+|+++|.++..+ +.+. .. .+.++..|+.+.. ...
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~-~~~~----~~----~~~~~~~d~~~~~~~~~~------ 66 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAAL-AVLN----RM----GVATKQVDAKDEAGLAKA------ 66 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHH-HHHH----TT----TCEEEECCTTCHHHHHHH------
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHH----hC----CCcEEEecCCCHHHHHHH------
Confidence 3567888887 6666543 345645799999999887 5544 12 2456777765432 111
Q ss_pred CCCccEEEECCCCC
Q 021116 229 DGPFDYMSVTPPYT 242 (317)
Q Consensus 229 ~~~fDlV~~dPPy~ 242 (317)
-..+|+||...|+.
T Consensus 67 ~~~~d~vi~~~~~~ 80 (118)
T 3ic5_A 67 LGGFDAVISAAPFF 80 (118)
T ss_dssp TTTCSEEEECSCGG
T ss_pred HcCCCEEEECCCch
Confidence 14689999887754
No 380
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=81.38 E-value=5.1 Score=36.92 Aligned_cols=93 Identities=15% Similarity=0.076 Sum_probs=54.3
Q ss_pred CCCeEEEECCCcchHHH---HHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE--ecHHHHHHHHhhhcCC
Q 021116 155 RPGRWLDLYSGTGSVGI---EAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT--VRVETFLERAEQFVGK 228 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~I---eaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~--gD~~~~l~~~~~~~~~ 228 (317)
++++||=.| |+|.+|+ .+++ .|+ +|++++.+++.+ +.+++ +|.+ .++. .|..+.+... .
T Consensus 150 ~g~~VlV~g-g~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~---~vi~~~~~~~~~~~~~-----~ 214 (346)
T 3fbg_A 150 EGKTLLIIN-GAGGVGSIATQIAKAYGL-RVITTASRNETI-EWTKK----MGAD---IVLNHKESLLNQFKTQ-----G 214 (346)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTC-EEEEECCSHHHH-HHHHH----HTCS---EEECTTSCHHHHHHHH-----T
T ss_pred CCCEEEEEc-CCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHh----cCCc---EEEECCccHHHHHHHh-----C
Confidence 578888774 3445554 3333 577 899999999988 88765 4643 1222 2333333222 2
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...+|+||-.- + ....++... +.|+++|.++...
T Consensus 215 ~~g~Dvv~d~~----g-~~~~~~~~~--~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 215 IELVDYVFCTF----N-TDMYYDDMI--QLVKPRGHIATIV 248 (346)
T ss_dssp CCCEEEEEESS----C-HHHHHHHHH--HHEEEEEEEEESS
T ss_pred CCCccEEEECC----C-chHHHHHHH--HHhccCCEEEEEC
Confidence 35799988642 1 122333332 2689999997643
No 381
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=81.27 E-value=3.4 Score=38.30 Aligned_cols=94 Identities=9% Similarity=-0.002 Sum_probs=52.3
Q ss_pred CeEEEECCCc-chHH-HHHH-H-cCCCEEEEEeCCHH---HHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 157 GRWLDLYSGT-GSVG-IEAI-S-RGCSEVHFVEMDPW---VVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 157 ~rVLDlgcGt-G~l~-Ieaa-s-~Ga~~V~aVDin~~---al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
++||=.|+|. |.++ +.++ + .|+.+|+++|.+++ .+ +.++ .+|.+ .+.....|+.+ +... .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~----~lGa~-~v~~~~~~~~~-i~~~------~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIE----ELDAT-YVDSRQTPVED-VPDV------Y 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHH----HTTCE-EEETTTSCGGG-HHHH------S
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHH----HcCCc-ccCCCccCHHH-HHHh------C
Confidence 8999999732 4444 4444 3 57766999999887 66 6665 35542 11000123333 2221 1
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
+.+|+||-.- +. ...++... +.|+++|++++.-.
T Consensus 241 gg~Dvvid~~----g~-~~~~~~~~--~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 241 EQMDFIYEAT----GF-PKHAIQSV--QALAPNGVGALLGV 274 (357)
T ss_dssp CCEEEEEECS----CC-HHHHHHHH--HHEEEEEEEEECCC
T ss_pred CCCCEEEECC----CC-hHHHHHHH--HHHhcCCEEEEEeC
Confidence 3799998542 11 12233322 26899999887543
No 382
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=81.08 E-value=11 Score=34.43 Aligned_cols=84 Identities=17% Similarity=0.200 Sum_probs=54.6
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..+++||=-|++.| +|.+ ++++|+ +|++++.++..+ +.+.+.++..+...++.++..|+.+... ......
T Consensus 6 l~~k~vlVTGas~g-IG~~la~~l~~~G~-~Vv~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 6 FAGRTAFVTGGANG-VGIGLVRQLLNQGC-KVAIADIRQDSI-DKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CTTCEEEEETTTST-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchH-HHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46778888887654 4443 456776 699999999987 7777777666543468889988754321 111010
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 83 ~~~g~id~lv~nAg 96 (319)
T 3ioy_A 83 ARFGPVSILCNNAG 96 (319)
T ss_dssp HHTCCEEEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 11257899998753
No 383
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.78 E-value=15 Score=31.46 Aligned_cols=82 Identities=12% Similarity=0.071 Sum_probs=52.5
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.++..+ +.+.+.++..+. ++.++..|+.+... ......
T Consensus 3 l~~k~vlITGas-~gIG~~~a~~l~~~G~-~v~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 3 LNEKVALVTGAS-RGIGFEVAHALASKGA-TVVGTATSQASA-EKFENSMKEKGF--KARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC--ceEEEEecCCCHHHHHHHHHHHH
Confidence 456778877754 455543 456776 699999999887 766666666553 48889988754321 111111
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 12357899998754
No 384
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.73 E-value=11 Score=32.73 Aligned_cols=84 Identities=10% Similarity=0.101 Sum_probs=52.0
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCC-CceEEEEecHHHHHH---HHhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLE---RAEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~-~~v~ii~gD~~~~l~---~~~~~ 225 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.+++.+ +.+.+.+...+-. .++.++.+|+.+... .....
T Consensus 5 ~~~k~~lVTGas~G-IG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 5 KQKGLAIITGASQG-IGAVIAAGLATDGY-RVVLIARSKQNL-EKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCCEEEEESTTSH-HHHHHHHHHHHHTC-EEEEEESCHHHH-HHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 45778888886654 4443 456676 799999999987 7766666554221 357888888764321 01000
Q ss_pred cCCCCCccEEEECCC
Q 021116 226 VGKDGPFDYMSVTPP 240 (317)
Q Consensus 226 ~~~~~~fDlV~~dPP 240 (317)
...-+..|++|.+.-
T Consensus 82 ~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 82 HQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHCCEEEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 001157899998753
No 385
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.61 E-value=17 Score=31.61 Aligned_cols=84 Identities=19% Similarity=0.142 Sum_probs=51.8
Q ss_pred CCCCeEEEECC-Ccch---HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYS-GTGS---VGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgc-GtG~---l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|+ |+|. ++..+++.|+ +|+.++.+...+ +.+.+.++..+- .++.++.+|+.+... . .....
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRL-GETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHH-HHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHH
Confidence 45778887776 4442 2223556776 699999999887 666666654432 458899998754321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 97 ~~~g~id~li~~Ag 110 (266)
T 3o38_A 97 EKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCcEEEECCC
Confidence 01147899998754
No 386
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.54 E-value=18 Score=31.13 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=52.7
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 7 ~~~k~vlITGas-~giG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 7 FENKVGIVTGSG-GGIGQAYAEALAREGA-AVVVADINAEAA-EAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 467888888865 445543 456676 699999999988 77766666544 357888988765321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 82 ~~~g~id~li~~Ag 95 (253)
T 3qiv_A 82 AEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01147899998763
No 387
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=80.33 E-value=16 Score=27.22 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=46.0
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
+|..||-++... +..+.-++..|+. +. ...+..+.+..+. ...+|+|++|.-....+..++++.+.+
T Consensus 5 ~ilivdd~~~~~-~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~ 71 (127)
T 3i42_A 5 QALIVEDYQAAA-ETFKELLEMLGFQ--AD-YVMSGTDALHAMS-----TRGYDAVFIDLNLPDTSGLALVKQLRA 71 (127)
T ss_dssp EEEEECSCHHHH-HHHHHHHHHTTEE--EE-EESSHHHHHHHHH-----HSCCSEEEEESBCSSSBHHHHHHHHHH
T ss_pred eEEEEcCCHHHH-HHHHHHHHHcCCC--EE-EECCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 689999999987 8888888887762 32 3456666665543 256999999854333345566777754
No 388
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=80.27 E-value=25 Score=30.68 Aligned_cols=83 Identities=16% Similarity=0.043 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEEEecHHHHHH--H-Hhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLE--R-AEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii~gD~~~~l~--~-~~~~ 225 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.+++.+ +.+.+.+.. .+- .++.++.+|+.+... . ....
T Consensus 6 l~~k~~lVTGas~G-IG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 6 LSEAVAVVTGGSSG-IGLATVELLLEAGA-AVAFCARDGERL-RAAESALRQRFPG-ARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcCC-ceEEEEeCCCCCHHHHHHHHHHH
Confidence 56788888886654 4433 456676 699999999987 766666654 332 347888888754321 0 0000
Q ss_pred cCCCCCccEEEECCC
Q 021116 226 VGKDGPFDYMSVTPP 240 (317)
Q Consensus 226 ~~~~~~fDlV~~dPP 240 (317)
...-+..|++|.+.-
T Consensus 82 ~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 82 ERTLGCASILVNNAG 96 (265)
T ss_dssp HHHHCSCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001157899998754
No 389
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=80.25 E-value=6.6 Score=35.25 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=53.8
Q ss_pred CCCCeEEEECCCcch---HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhcC
Q 021116 154 LRPGRWLDLYSGTGS---VGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~---l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~~ 227 (317)
++++++|=-|++.|. ++..+++.|+ +|+.+|.+++.+ +.+.+.++..|. ++..+.+|+.+... ...+...
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~-~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLL-AESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHH-HHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHH
Confidence 578888888876652 2233556787 699999999998 777677766664 47788888654321 1111112
Q ss_pred CCCCccEEEECC
Q 021116 228 KDGPFDYMSVTP 239 (317)
Q Consensus 228 ~~~~fDlV~~dP 239 (317)
.-+..|+++.|.
T Consensus 83 ~~G~iDiLVNNA 94 (255)
T 4g81_D 83 EGIHVDILINNA 94 (255)
T ss_dssp TTCCCCEEEECC
T ss_pred HCCCCcEEEECC
Confidence 336789999875
No 390
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=79.90 E-value=4.2 Score=37.51 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=54.6
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
.++++||=.|+ |.|.+++.+++ .|+ +|+++ .+++.+ +.+++ +|... +. ...|..+.+.... ...
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~-~~~~~----lGa~~-i~-~~~~~~~~~~~~~----~~~ 215 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDL-EYVRD----LGATP-ID-ASREPEDYAAEHT----AGQ 215 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHH-HHHHH----HTSEE-EE-TTSCHHHHHHHHH----TTS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHH-HHHHH----cCCCE-ec-cCCCHHHHHHHHh----cCC
Confidence 46889999984 34555555444 576 79999 888887 77653 56432 22 1123333333322 134
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+|+||-.-. . +.++... +.|+++|.+++.-
T Consensus 216 g~D~vid~~g---~---~~~~~~~--~~l~~~G~iv~~g 246 (343)
T 3gaz_A 216 GFDLVYDTLG---G---PVLDASF--SAVKRFGHVVSCL 246 (343)
T ss_dssp CEEEEEESSC---T---HHHHHHH--HHEEEEEEEEESC
T ss_pred CceEEEECCC---c---HHHHHHH--HHHhcCCeEEEEc
Confidence 6999886531 1 2233322 2689999988743
No 391
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=79.43 E-value=18 Score=30.88 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=50.5
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH--H------HHHHH
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV--E------TFLER 221 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~--~------~~l~~ 221 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.++..+ +.+.+.++..+. .++.++..|+ . .+...
T Consensus 12 l~~k~vlITGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 12 LKGRVILVTGAA-RGIGAAAARAYAAHGA-SVVLLGRTEASL-AEVSDQIKSAGQ-PQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTS-CCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEecCHHHH-HHHHHHHHhcCC-CCceEEEeccccCCHHHHHHHHHH
Confidence 457788877754 555544 445676 699999999988 777777766553 2366777665 1 11111
Q ss_pred HhhhcCCCCCccEEEECCC
Q 021116 222 AEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 222 ~~~~~~~~~~fDlV~~dPP 240 (317)
.. ..-+..|++|.+.-
T Consensus 88 ~~---~~~g~id~lv~nAg 103 (247)
T 3i1j_A 88 VE---HEFGRLDGLLHNAS 103 (247)
T ss_dssp HH---HHHSCCSEEEECCC
T ss_pred HH---HhCCCCCEEEECCc
Confidence 11 01147899998764
No 392
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=79.39 E-value=19 Score=27.53 Aligned_cols=69 Identities=12% Similarity=0.067 Sum_probs=46.9
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQIS 254 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~ 254 (317)
.+|..||-++... +..+.-++..|... ......+..+.+..+. ...+|+||+|.-....+..++++.+.
T Consensus 6 ~~ILivdd~~~~~-~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr 74 (144)
T 3kht_A 6 KRVLVVEDNPDDI-ALIRRVLDRKDIHC-QLEFVDNGAKALYQVQ-----QAKYDLIILDIGLPIANGFEVMSAVR 74 (144)
T ss_dssp EEEEEECCCHHHH-HHHHHHHHHTTCCE-EEEEESSHHHHHHHHT-----TCCCSEEEECTTCGGGCHHHHHHHHH
T ss_pred CEEEEEeCCHHHH-HHHHHHHHhcCCCe-eEEEECCHHHHHHHhh-----cCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 3699999999987 88888888887642 1234456766666553 46799999996332224455666665
No 393
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=78.93 E-value=14 Score=32.36 Aligned_cols=82 Identities=11% Similarity=0.034 Sum_probs=51.8
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-HhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~~ 227 (317)
.++++|=.|+ +|.+|.+ +++.|+ +|++++.++..+ +.+.+.++..+...++.++.+|+.+... . +.....
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQGL-KVVGCARTVGNI-EELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEECChHHH-HHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 4677887774 5566654 345676 699999999887 6666666666654567888888754321 1 100000
Q ss_pred CCCCccEEEECC
Q 021116 228 KDGPFDYMSVTP 239 (317)
Q Consensus 228 ~~~~fDlV~~dP 239 (317)
..+.+|+||.+.
T Consensus 108 ~~g~iD~vi~~A 119 (279)
T 1xg5_A 108 QHSGVDICINNA 119 (279)
T ss_dssp HHCCCSEEEECC
T ss_pred hCCCCCEEEECC
Confidence 114689999865
No 394
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=78.78 E-value=12 Score=28.21 Aligned_cols=79 Identities=10% Similarity=0.063 Sum_probs=48.7
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCc
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALV 259 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lL 259 (317)
+|..+|-++... +..+.-++..|+. +.....+..+.+.... ...+|+|++|.-....+..++++.+.+ .
T Consensus 3 ~ilivdd~~~~~-~~l~~~L~~~g~~--v~~~~~~~~~a~~~~~-----~~~~dlii~d~~l~~~~g~~~~~~l~~---~ 71 (134)
T 3f6c_A 3 NAIIIDDHPLAI-AAIRNLLIKNDIE--ILAELTEGGSAVQRVE-----TLKPDIVIIDVDIPGVNGIQVLETLRK---R 71 (134)
T ss_dssp EEEEECCCHHHH-HHHHHHHHHTTEE--EEEEESSSTTHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHH---T
T ss_pred EEEEEcCCHHHH-HHHHHHHhhCCcE--EEEEcCCHHHHHHHHH-----hcCCCEEEEecCCCCCChHHHHHHHHh---c
Confidence 588999999987 8888888877642 3223445544444332 256999999964333345566777754 2
Q ss_pred CCCeEEEEEe
Q 021116 260 GKDSFIVVEY 269 (317)
Q Consensus 260 kpgG~ivv~~ 269 (317)
.++..+++-.
T Consensus 72 ~~~~~ii~~s 81 (134)
T 3f6c_A 72 QYSGIIIIVS 81 (134)
T ss_dssp TCCSEEEEEE
T ss_pred CCCCeEEEEe
Confidence 3444444433
No 395
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=78.78 E-value=20 Score=31.63 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=53.0
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCC-CceEEEEecHHHHHH---HHhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFL-DVSSIHTVRVETFLE---RAEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~-~~v~ii~gD~~~~l~---~~~~~ 225 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+.. .++.++.+|+.+... .....
T Consensus 9 l~~k~vlVTGas~-gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 9 FQDRTYLVTGGGS-GIGKGVAAGLVAAGA-SVMIVGRNPDKL-AGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp CTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 5678888888654 44443 456676 699999999987 7776776655432 257888988754321 11000
Q ss_pred cCCCCCccEEEECCC
Q 021116 226 VGKDGPFDYMSVTPP 240 (317)
Q Consensus 226 ~~~~~~fDlV~~dPP 240 (317)
....+..|++|.+.-
T Consensus 86 ~~~~g~id~lv~nAg 100 (281)
T 3svt_A 86 TAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001146899998753
No 396
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=78.69 E-value=22 Score=33.05 Aligned_cols=109 Identities=10% Similarity=0.023 Sum_probs=61.8
Q ss_pred CCCeEEEECCCcchHHHHHHHcCCCEEEEEeCC-HHHHHHHHHHhHHHhC--------------------CCCceEEEEe
Q 021116 155 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMD-PWVVSNVLIPNLEWTG--------------------FLDVSSIHTV 213 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin-~~al~~~ar~N~~~~g--------------------l~~~v~ii~g 213 (317)
....|++||||..+....+...+. .+..+|+| |+.+ +.-++-+...+ ..++.+++.+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~P~vi-~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDYNESV-ELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEECHHHH-HHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCCHHHH-HHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 357899999999999998776532 25555555 7666 55444444331 1256889999
Q ss_pred cHHH--HHHH-HhhhcCCCCCccEEEECC--CCCC-ccHHHHHHHHHHcCCcCCCeEEE-EEe
Q 021116 214 RVET--FLER-AEQFVGKDGPFDYMSVTP--PYTA-VDYEVLMAQISKSALVGKDSFIV-VEY 269 (317)
Q Consensus 214 D~~~--~l~~-~~~~~~~~~~fDlV~~dP--Py~~-~~~~~~l~~L~~~~lLkpgG~iv-v~~ 269 (317)
|+.+ |+.. +.... ......++++-. .|.. .....+++.+.+ .+ ++|.++ .+.
T Consensus 175 DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~--~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 175 DLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMS--KF-SHGLWISYDP 233 (334)
T ss_dssp CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHH--HC-SSEEEEEEEE
T ss_pred CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHh--hC-CCcEEEEEec
Confidence 9875 4332 12211 223456666643 2321 123555665553 23 666654 544
No 397
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=78.68 E-value=1.9 Score=40.57 Aligned_cols=74 Identities=11% Similarity=-0.033 Sum_probs=45.2
Q ss_pred CCCeEEEECCCcchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaa----s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
++++||=+++|+|.+|+.++ ..|+ +|++++.+++.+ +.+++ +|.+.-+.....|..+.+.... ...
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~-~~~~~----lGa~~~~~~~~~~~~~~v~~~t----~~~ 239 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQA-DLLKA----QGAVHVCNAASPTFMQDLTEAL----VST 239 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHH-HHHHH----TTCSCEEETTSTTHHHHHHHHH----HHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHh----CCCcEEEeCCChHHHHHHHHHh----cCC
Confidence 57889988778887776543 3577 699999999987 87764 6654211111123333333221 013
Q ss_pred CccEEEEC
Q 021116 231 PFDYMSVT 238 (317)
Q Consensus 231 ~fDlV~~d 238 (317)
.+|+||-.
T Consensus 240 g~d~v~d~ 247 (379)
T 3iup_A 240 GATIAFDA 247 (379)
T ss_dssp CCCEEEES
T ss_pred CceEEEEC
Confidence 59998854
No 398
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.67 E-value=9 Score=34.50 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=53.2
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH---Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER---AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~---~~~~~ 226 (317)
..++++|=.|++.| +|.+ ++++|+ +|+.++.++..+ +.+.+.++..+. ++.++.+|+.+...- .....
T Consensus 29 l~gk~vlVTGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 29 FDGRAAVVTGGASG-IGLATATEFARRGA-RLVLSDVDQPAL-EQAVNGLRGQGF--DAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp STTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHH
Confidence 46788888887654 4443 456776 699999999988 777766665553 488899887653211 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 104 ~~~g~id~lvnnAg 117 (301)
T 3tjr_A 104 RLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHSSCSEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 01147899998754
No 399
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=78.42 E-value=20 Score=27.24 Aligned_cols=79 Identities=15% Similarity=0.084 Sum_probs=50.6
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. +. ...+..+.+..+. ...+|+|++|. .......++++.+.+
T Consensus 5 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlvi~d~-~~~~~g~~~~~~l~~--- 71 (142)
T 2qxy_A 5 PTVMVVDESRITF-LAVKNALEKDGFN--VI-WAKNEQEAFTFLR-----REKIDLVFVDV-FEGEESLNLIRRIRE--- 71 (142)
T ss_dssp CEEEEECSCHHHH-HHHHHHHGGGTCE--EE-EESSHHHHHHHHT-----TSCCSEEEEEC-TTTHHHHHHHHHHHH---
T ss_pred CeEEEEeCCHHHH-HHHHHHHHhCCCE--EE-EECCHHHHHHHHh-----ccCCCEEEEeC-CCCCcHHHHHHHHHH---
Confidence 3699999999987 8888888877762 43 4566666666553 35799999996 332233455555543
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..++.-+++-..
T Consensus 72 ~~~~~pii~ls~ 83 (142)
T 2qxy_A 72 EFPDTKVAVLSA 83 (142)
T ss_dssp HCTTCEEEEEES
T ss_pred HCCCCCEEEEEC
Confidence 234444444443
No 400
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=78.32 E-value=15 Score=35.71 Aligned_cols=95 Identities=19% Similarity=0.101 Sum_probs=54.6
Q ss_pred CeEEEECCCcchHHH--HHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh-------C------CC-CceEEEEecHHHHHH
Q 021116 157 GRWLDLYSGTGSVGI--EAISRGCSEVHFVEMDPWVVSNVLIPNLEWT-------G------FL-DVSSIHTVRVETFLE 220 (317)
Q Consensus 157 ~rVLDlgcGtG~l~I--eaas~Ga~~V~aVDin~~al~~~ar~N~~~~-------g------l~-~~v~ii~gD~~~~l~ 220 (317)
.+|.=+|+|+=..++ .++..|. +|+.+|.+++.+ +.+++.++.+ | .. ...++ ..|.. .+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~-~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~-~~- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQL-DAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-EL- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHH-HHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG-GG-
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHH-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH-HH-
Confidence 568888877633333 2444565 699999999987 7776643211 1 00 11223 44542 11
Q ss_pred HHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 221 RAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 221 ~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
...|+||.--|-.......++..+.. .++++.+|+.
T Consensus 113 ---------~~aDlVIeaVpe~~~~k~~v~~~l~~--~~~~~~ii~s 148 (463)
T 1zcj_A 113 ---------STVDLVVEAVFEDMNLKKKVFAELSA--LCKPGAFLCT 148 (463)
T ss_dssp ---------TTCSEEEECCCSCHHHHHHHHHHHHH--HSCTTCEEEE
T ss_pred ---------CCCCEEEEcCCCCHHHHHHHHHHHHh--hCCCCeEEEe
Confidence 45799998876432122455555543 5778877664
No 401
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=78.25 E-value=22 Score=27.72 Aligned_cols=68 Identities=19% Similarity=0.070 Sum_probs=47.3
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
.+|..||-++... +..+.-++..|+. + ....+..+.+..+. ...||+||+|--....+..++++.+.+
T Consensus 8 ~~ILivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~ 75 (154)
T 3gt7_A 8 GEILIVEDSPTQA-EHLKHILEETGYQ--T-EHVRNGREAVRFLS-----LTRPDLIISDVLMPEMDGYALCRWLKG 75 (154)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHTTTCE--E-EEESSHHHHHHHHT-----TCCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred CcEEEEeCCHHHH-HHHHHHHHHCCCE--E-EEeCCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 4799999999997 8888888877752 3 34467777666553 467999999853322344566666654
No 402
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=78.21 E-value=23 Score=30.80 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=52.0
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.+.+.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 10 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAG-IGRAIAGTFAKAGA-SVVVTDLKSEGA-EAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSH-HHHHHHHHHHHHTC-EEEEEESSHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 56788888876554 4443 456676 699999999987 77777666655 358889988754321 1 00000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 85 ~~~g~id~lv~nA 97 (256)
T 3gaf_A 85 DQFGKITVLVNNA 97 (256)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0114789999875
No 403
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=78.19 E-value=13 Score=32.46 Aligned_cols=81 Identities=10% Similarity=0.052 Sum_probs=53.1
Q ss_pred CCCCeEEEECCCcchHHH----HHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGI----EAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~I----eaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++.| +|. .+++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGA-DLVLAARTVERL-EDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46788888887655 333 3456776 699999999988 77777776655 358889988764321 1 11111
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 84 ~~~g~id~lv~nA 96 (264)
T 3ucx_A 84 KAYGRVDVVINNA 96 (264)
T ss_dssp HHTSCCSEEEECC
T ss_pred HHcCCCcEEEECC
Confidence 1125789999875
No 404
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=78.10 E-value=6.1 Score=34.61 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=53.2
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.++..+ +.+.+.++..+ .++.++.+|+.+... ......
T Consensus 5 ~~~k~vlVTGas~G-IG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 5 PRNATVAVIGAGDY-IGAEIAKKFAAEGF-TVFAGRRNGEKL-APLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CCSCEEEEECCSSH-HHHHHHHHHHHTTC-EEEEEESSGGGG-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHH
Confidence 46788888887654 4433 456776 699999999887 77777776654 358889998754321 111111
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
.. +..|++|.+.-
T Consensus 80 ~~-g~id~lv~nAg 92 (252)
T 3h7a_A 80 AH-APLEVTIFNVG 92 (252)
T ss_dssp HH-SCEEEEEECCC
T ss_pred hh-CCceEEEECCC
Confidence 12 57899998753
No 405
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=77.89 E-value=17 Score=28.36 Aligned_cols=68 Identities=12% Similarity=0.041 Sum_probs=44.1
Q ss_pred CCeEEEECCCcchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH--HHHHhhhcCCC
Q 021116 156 PGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQFVGKD 229 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Iea----as~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~--l~~~~~~~~~~ 229 (317)
..+++=+|| |.+|..+ ...|. +|+++|.|++.+ +.+++ .+ +.++.+|..+. +... .-
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~-~V~~id~~~~~~-~~~~~----~~----~~~~~gd~~~~~~l~~~-----~~ 68 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGK-KVLAVDKSKEKI-ELLED----EG----FDAVIADPTDESFYRSL-----DL 68 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTC-CEEEEESCHHHH-HHHHH----TT----CEEEECCTTCHHHHHHS-----CC
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCC-eEEEEECCHHHH-HHHHH----CC----CcEEECCCCCHHHHHhC-----Cc
Confidence 456777776 5566543 34565 699999999987 66643 22 45778887653 2221 12
Q ss_pred CCccEEEECCC
Q 021116 230 GPFDYMSVTPP 240 (317)
Q Consensus 230 ~~fDlV~~dPP 240 (317)
..+|+|++..|
T Consensus 69 ~~~d~vi~~~~ 79 (141)
T 3llv_A 69 EGVSAVLITGS 79 (141)
T ss_dssp TTCSEEEECCS
T ss_pred ccCCEEEEecC
Confidence 46899998765
No 406
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=77.68 E-value=19 Score=28.19 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=46.2
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
+|..||-++... +..+.-++..|+. +.....+..+.+..+... ...+|+||+|.-....+..++++.+.+
T Consensus 38 ~Ilivdd~~~~~-~~l~~~L~~~g~~--v~~~~~~~~~al~~l~~~---~~~~dliilD~~l~~~~g~~~~~~lr~ 107 (157)
T 3hzh_A 38 NVLIVDDSVFTV-KQLTQIFTSEGFN--IIDTAADGEEAVIKYKNH---YPNIDIVTLXITMPKMDGITCLSNIME 107 (157)
T ss_dssp EEEEECSCHHHH-HHHHHHHHHTTCE--EEEEESSHHHHHHHHHHH---GGGCCEEEECSSCSSSCHHHHHHHHHH
T ss_pred EEEEEeCCHHHH-HHHHHHHHhCCCe--EEEEECCHHHHHHHHHhc---CCCCCEEEEeccCCCccHHHHHHHHHh
Confidence 799999999987 8888888877752 322456776666554310 126899999963322344566666653
No 407
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=77.18 E-value=22 Score=31.86 Aligned_cols=96 Identities=9% Similarity=0.056 Sum_probs=53.2
Q ss_pred CeEEEECCCcch--HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHH-------hCCC--------------CceEEEEe
Q 021116 157 GRWLDLYSGTGS--VGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEW-------TGFL--------------DVSSIHTV 213 (317)
Q Consensus 157 ~rVLDlgcGtG~--l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~-------~gl~--------------~~v~ii~g 213 (317)
.+|.=+|+|.=. ++..++..|. +|+.+|.+++.+ +.+++.++. .|.- .++++ ..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~-~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~~ 92 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDIL-AKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-ST 92 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHH-HHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-ec
Confidence 568778776522 2223445665 799999999987 766443321 2211 12322 23
Q ss_pred cHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 214 RVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 214 D~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
|..+.+ ...|+||.--|-.......++..+. ..++++.+++.
T Consensus 93 ~~~~~~----------~~aD~Vi~avp~~~~~~~~v~~~l~--~~~~~~~iv~s 134 (302)
T 1f0y_A 93 DAASVV----------HSTDLVVEAIVENLKVKNELFKRLD--KFAAEHTIFAS 134 (302)
T ss_dssp CHHHHT----------TSCSEEEECCCSCHHHHHHHHHHHT--TTSCTTCEEEE
T ss_pred CHHHhh----------cCCCEEEEcCcCcHHHHHHHHHHHH--hhCCCCeEEEE
Confidence 443221 4679999876543212345555554 46777776543
No 408
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.11 E-value=11 Score=35.37 Aligned_cols=97 Identities=16% Similarity=0.121 Sum_probs=53.6
Q ss_pred CCCCeEEEECCCcchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa----s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
..+++|+=+|+ |.+|..++ ..|+ +|+++|.+++.+ +.+++. .|.. +.....+..++....
T Consensus 164 l~~~~V~ViGa--G~iG~~~a~~l~~~Ga-~V~~~d~~~~~~-~~~~~~---~g~~--~~~~~~~~~~l~~~~------- 227 (369)
T 2eez_A 164 VAPASVVILGG--GTVGTNAAKIALGMGA-QVTILDVNHKRL-QYLDDV---FGGR--VITLTATEANIKKSV------- 227 (369)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHH---TTTS--EEEEECCHHHHHHHH-------
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEECCHHHH-HHHHHh---cCce--EEEecCCHHHHHHHH-------
Confidence 45789999987 66766433 4577 799999999887 666432 3432 333333333332222
Q ss_pred CCccEEEECCCCCCccHHHH-HHHHHHcCCcCCCeEEEEE
Q 021116 230 GPFDYMSVTPPYTAVDYEVL-MAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~-l~~L~~~~lLkpgG~ivv~ 268 (317)
..+|+|+...+........+ .+... +.++++|+|+..
T Consensus 228 ~~~DvVi~~~g~~~~~~~~li~~~~l--~~mk~gg~iV~v 265 (369)
T 2eez_A 228 QHADLLIGAVLVPGAKAPKLVTRDML--SLMKEGAVIVDV 265 (369)
T ss_dssp HHCSEEEECCC-------CCSCHHHH--TTSCTTCEEEEC
T ss_pred hCCCEEEECCCCCccccchhHHHHHH--HhhcCCCEEEEE
Confidence 35899998765431000000 11111 357888887643
No 409
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.07 E-value=19 Score=31.41 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=51.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+- .++.++.+|+.+... . .....
T Consensus 8 l~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 8 LQGRSVVVTGGT-KGIGRGIATVFARAGA-NVAVAGRSTADI-DACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 467788877755 445543 456676 799999999987 777666665542 358889998754321 1 00000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 84 ~~~g~id~lvnnA 96 (262)
T 3pk0_A 84 EEFGGIDVVCANA 96 (262)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 0114789999875
No 410
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=76.95 E-value=22 Score=26.93 Aligned_cols=82 Identities=24% Similarity=0.225 Sum_probs=52.8
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. + ....+..+.+..+. ...||+|++|.-....+..++++.+.+. .
T Consensus 7 ~~iLivdd~~~~~-~~l~~~l~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~ 76 (140)
T 3grc_A 7 PRILICEDDPDIA-RLLNLMLEKGGFD--S-DMVHSAAQALEQVA-----RRPYAAMTVDLNLPDQDGVSLIRALRRD-S 76 (140)
T ss_dssp SEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEECSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHTS-G
T ss_pred CCEEEEcCCHHHH-HHHHHHHHHCCCe--E-EEECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhC-c
Confidence 4799999999997 8888888887763 3 34456666665543 3579999999533333445666666531 1
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..++..+++...
T Consensus 77 ~~~~~~ii~~s~ 88 (140)
T 3grc_A 77 RTRDLAIVVVSA 88 (140)
T ss_dssp GGTTCEEEEECT
T ss_pred ccCCCCEEEEec
Confidence 334555555443
No 411
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=76.86 E-value=4.6 Score=37.20 Aligned_cols=91 Identities=11% Similarity=0.020 Sum_probs=52.2
Q ss_pred CeEEEECCCcchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe---cHHHHHHHHhhhcCCC
Q 021116 157 GRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV---RVETFLERAEQFVGKD 229 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaa----s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g---D~~~~l~~~~~~~~~~ 229 (317)
++|| +..|+|.+|+.++ ..|+ +|++++.+++.+ +.+++ +|.. .++.. |..+.+.... ..
T Consensus 166 ~~vl-i~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~-~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~----~~ 231 (349)
T 3pi7_A 166 KAFV-MTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQI-ALLKD----IGAA---HVLNEKAPDFEATLREVM----KA 231 (349)
T ss_dssp SEEE-ESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGH-HHHHH----HTCS---EEEETTSTTHHHHHHHHH----HH
T ss_pred CEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHH----cCCC---EEEECCcHHHHHHHHHHh----cC
Confidence 4554 6567777776533 3577 899999999887 77753 5643 23332 3333332221 01
Q ss_pred CCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 230 GPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
..+|+||-.- + ... ++... +.|+++|.+++.-
T Consensus 232 ~g~D~vid~~----g-~~~-~~~~~--~~l~~~G~iv~~G 263 (349)
T 3pi7_A 232 EQPRIFLDAV----T-GPL-ASAIF--NAMPKRARWIIYG 263 (349)
T ss_dssp HCCCEEEESS----C-HHH-HHHHH--HHSCTTCEEEECC
T ss_pred CCCcEEEECC----C-Chh-HHHHH--hhhcCCCEEEEEe
Confidence 3699988642 1 111 22222 2689999988754
No 412
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=76.36 E-value=7.3 Score=34.41 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=51.6
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH---HHHHh-hhc
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF---LERAE-QFV 226 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~---l~~~~-~~~ 226 (317)
.++++|=-|++ |.+|.+ +++.|+ +|++++.+...+ +.+.+.++..+- .++.++..|+.+. ...+. .+.
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGI-MVVLTCRDVTKG-HEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHH
Confidence 46778877755 555554 345676 799999999887 666666655443 3588999988654 11111 000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 87 ~~~g~iD~lv~nAg 100 (311)
T 3o26_A 87 THFGKLDILVNNAG 100 (311)
T ss_dssp HHHSSCCEEEECCC
T ss_pred HhCCCCCEEEECCc
Confidence 01157999999864
No 413
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=76.20 E-value=2.3 Score=38.78 Aligned_cols=93 Identities=12% Similarity=0.057 Sum_probs=50.8
Q ss_pred CCC-eEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEe-cH-HHHHHHHhhhcCC
Q 021116 155 RPG-RWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTV-RV-ETFLERAEQFVGK 228 (317)
Q Consensus 155 ~~~-rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~g-D~-~~~l~~~~~~~~~ 228 (317)
+++ +||=.|+ |.|.+++.+++ .|+ +|++++.+++.+ +.+++ +|.+. ++.. +. .+..... .
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~-~~~~~----lGa~~---~i~~~~~~~~~~~~~-----~ 213 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEH-DYLRV----LGAKE---VLAREDVMAERIRPL-----D 213 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCH-HHHHH----TTCSE---EEECC---------C-----C
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHH----cCCcE---EEecCCcHHHHHHHh-----c
Confidence 343 7988886 44555555444 576 599999998877 77753 56431 2222 21 1111111 1
Q ss_pred CCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 229 DGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 229 ~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...+|+||-.-. ...+... + +.++++|++++.-
T Consensus 214 ~~~~d~vid~~g--~~~~~~~---~---~~l~~~G~~v~~G 246 (328)
T 1xa0_A 214 KQRWAAAVDPVG--GRTLATV---L---SRMRYGGAVAVSG 246 (328)
T ss_dssp SCCEEEEEECST--TTTHHHH---H---HTEEEEEEEEECS
T ss_pred CCcccEEEECCc--HHHHHHH---H---HhhccCCEEEEEe
Confidence 246999886431 1122222 2 2689999988653
No 414
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=76.20 E-value=3.8 Score=36.43 Aligned_cols=74 Identities=14% Similarity=0.083 Sum_probs=44.8
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCH-------------------HHHHHHHHHhHHHhCCCCceEEE
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDP-------------------WVVSNVLIPNLEWTGFLDVSSIH 211 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~-------------------~al~~~ar~N~~~~gl~~~v~ii 211 (317)
.+.+|+=+||| .+|.+ ++..|..+++.+|.+. ..+ +.+.+.+...+-.-+++.+
T Consensus 30 ~~~~VlVvG~G--g~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka-~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 30 KDSRVLIVGLG--GLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV-ESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHCEEEEECCS--HHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH-HHHHHHHHHHCTTSEEEEE
T ss_pred hCCeEEEEeeC--HHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH-HHHHHHHHHHCCCcEEEEE
Confidence 35789999876 34433 3456888999999996 444 6676777665432235555
Q ss_pred EecHHH--HHHHHhhhcCCCCCccEEEEC
Q 021116 212 TVRVET--FLERAEQFVGKDGPFDYMSVT 238 (317)
Q Consensus 212 ~gD~~~--~l~~~~~~~~~~~~fDlV~~d 238 (317)
..++.. ....+ ..||+|+..
T Consensus 107 ~~~~~~~~~~~~~-------~~~DvVi~~ 128 (249)
T 1jw9_B 107 NALLDDAELAALI-------AEHDLVLDC 128 (249)
T ss_dssp CSCCCHHHHHHHH-------HTSSEEEEC
T ss_pred eccCCHhHHHHHH-------hCCCEEEEe
Confidence 543321 11111 468999974
No 415
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=76.19 E-value=29 Score=30.13 Aligned_cols=83 Identities=11% Similarity=-0.005 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.+.......++.++.+|+.+... . .....
T Consensus 11 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 11 FTDRVVLITGGG-SGLGRATAVRLAAEGA-KLSLVDVSSEGL-EASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 457788888864 555543 445676 699999999887 6665555443112347888888754321 1 10000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 88 ~~~g~id~lv~nA 100 (267)
T 1iy8_A 88 ERFGRIDGFFNNA 100 (267)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0114689999874
No 416
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=76.15 E-value=17 Score=31.47 Aligned_cols=82 Identities=10% Similarity=-0.007 Sum_probs=49.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecH--HHH--HHHH-hh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRV--ETF--LERA-EQ 224 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~--~~~--l~~~-~~ 224 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.+...+- .++.++..|+ .+. ...+ ..
T Consensus 10 l~~k~vlVTGas~-gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 10 LNDRIILVTGASD-GIGREAAMTYARYGA-TVILLGRNEEKL-RQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCC-hHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHH
Confidence 4678888888654 44443 456676 699999999887 666665554432 2467888887 221 1111 11
Q ss_pred hcCCCCCccEEEECC
Q 021116 225 FVGKDGPFDYMSVTP 239 (317)
Q Consensus 225 ~~~~~~~fDlV~~dP 239 (317)
.....+..|++|.+.
T Consensus 86 ~~~~~g~id~lv~nA 100 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNA 100 (252)
T ss_dssp HHHHCSCCSEEEECC
T ss_pred HHHhCCCCCEEEECC
Confidence 111125789999865
No 417
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=75.85 E-value=40 Score=29.41 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=52.9
Q ss_pred CCCCCeEEEECCCc--c---hHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhh
Q 021116 153 SLRPGRWLDLYSGT--G---SVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQ 224 (317)
Q Consensus 153 ~~~~~rVLDlgcGt--G---~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~ 224 (317)
+++++++|=-|+++ | .++..+++.|+ +|+.++.+++.+ +.+.+-++..+- .++.+++.|+.+... ...+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSR-KELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGH-HHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHH
Confidence 36788999888643 3 22333556787 699999998887 666666665543 347788888754211 0000
Q ss_pred hcCCCCCccEEEECCC
Q 021116 225 FVGKDGPFDYMSVTPP 240 (317)
Q Consensus 225 ~~~~~~~fDlV~~dPP 240 (317)
....-+..|+++.|.-
T Consensus 80 ~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHCCCSEEEECCC
T ss_pred HHHHhCCCCEEEeccc
Confidence 0011267899998753
No 418
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=75.76 E-value=21 Score=26.84 Aligned_cols=69 Identities=22% Similarity=0.010 Sum_probs=46.4
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCC-CccHHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYT-AVDYEVLMAQISK 255 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~-~~~~~~~l~~L~~ 255 (317)
.+|..||-++... +..+.-++..|+. +.....+..+.+..+. ...+|+|++|--.. .....++++.+..
T Consensus 10 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v~~~~~~~~~a~~~~~-----~~~~dlii~d~~~~~~~~g~~~~~~l~~ 79 (140)
T 3cg0_A 10 PGVLIVEDGRLAA-ATLRIQLESLGYD--VLGVFDNGEEAVRCAP-----DLRPDIALVDIMLCGALDGVETAARLAA 79 (140)
T ss_dssp CEEEEECCBHHHH-HHHHHHHHHHTCE--EEEEESSHHHHHHHHH-----HHCCSEEEEESSCCSSSCHHHHHHHHHH
T ss_pred ceEEEEECCHHHH-HHHHHHHHHCCCe--eEEEECCHHHHHHHHH-----hCCCCEEEEecCCCCCCCHHHHHHHHHh
Confidence 4799999999997 8888888887763 3323566666665443 24699999985322 2244556666654
No 419
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=75.68 E-value=8 Score=36.01 Aligned_cols=94 Identities=10% Similarity=0.001 Sum_probs=53.9
Q ss_pred CCCCeEEEECCC--cchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEE---ecHHHHHHHHhhhcC
Q 021116 154 LRPGRWLDLYSG--TGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHT---VRVETFLERAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcG--tG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~---gD~~~~l~~~~~~~~ 227 (317)
.++++||=.|++ .|.+++.+++ .|+ +|+++- +++.+ +.++ .+|.+ .++. .|..+.+....
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~-~~~~----~lGa~---~vi~~~~~~~~~~v~~~t---- 228 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNF-DLAK----SRGAE---EVFDYRAPNLAQTIRTYT---- 228 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGH-HHHH----HTTCS---EEEETTSTTHHHHHHHHT----
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHH-HHHH----HcCCc---EEEECCCchHHHHHHHHc----
Confidence 467899988872 5666666554 576 788885 77776 6664 45653 2333 23333333332
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCc-CCCeEEEEEe
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALV-GKDSFIVVEY 269 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lL-kpgG~ivv~~ 269 (317)
++.+|+||-.- +. ...++...+ .| +++|+++..-
T Consensus 229 -~g~~d~v~d~~----g~-~~~~~~~~~--~l~~~~G~iv~~g 263 (371)
T 3gqv_A 229 -KNNLRYALDCI----TN-VESTTFCFA--AIGRAGGHYVSLN 263 (371)
T ss_dssp -TTCCCEEEESS----CS-HHHHHHHHH--HSCTTCEEEEESS
T ss_pred -cCCccEEEECC----Cc-hHHHHHHHH--HhhcCCCEEEEEe
Confidence 24599988542 11 122332221 46 5899987643
No 420
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=75.53 E-value=23 Score=26.43 Aligned_cols=82 Identities=10% Similarity=-0.021 Sum_probs=51.6
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. +. ...+..+.+..+. ...+|+|++|.-....+..++++.+.+. .
T Consensus 7 ~~ilivdd~~~~~-~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~ 76 (132)
T 3lte_A 7 KRILVVDDDQAMA-AAIERVLKRDHWQ--VE-IAHNGFDAGIKLS-----TFEPAIMTLDLSMPKLDGLDVIRSLRQN-K 76 (132)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--EE-EESSHHHHHHHHH-----HTCCSEEEEESCBTTBCHHHHHHHHHTT-T
T ss_pred ccEEEEECCHHHH-HHHHHHHHHCCcE--EE-EeCCHHHHHHHHH-----hcCCCEEEEecCCCCCCHHHHHHHHHhc-C
Confidence 4799999999987 8888888877752 33 4566666665543 3579999999533223445666666531 1
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..+.-.+++...
T Consensus 77 ~~~~~~ii~~~~ 88 (132)
T 3lte_A 77 VANQPKILVVSG 88 (132)
T ss_dssp CSSCCEEEEECC
T ss_pred ccCCCeEEEEeC
Confidence 123444555443
No 421
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=75.50 E-value=21 Score=31.77 Aligned_cols=94 Identities=11% Similarity=0.058 Sum_probs=53.1
Q ss_pred CeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHh---------CCC--------CceEEEEecH
Q 021116 157 GRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWT---------GFL--------DVSSIHTVRV 215 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~---------gl~--------~~v~ii~gD~ 215 (317)
.+|.=+|+| .+|.. ++..|. +|+.+|.+++.+ +.+++.++.. ++. .+++ ...|.
T Consensus 5 ~kV~VIGaG--~mG~~iA~~la~~G~-~V~l~d~~~~~~-~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~-~~~~~ 79 (283)
T 4e12_A 5 TNVTVLGTG--VLGSQIAFQTAFHGF-AVTAYDINTDAL-DAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIR-YSDDL 79 (283)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSHHHH-HHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCE-EESCH
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCC-eEEEEeCCHHHH-HHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeE-EeCCH
Confidence 356656655 45433 345665 799999999998 7776653221 111 0122 23444
Q ss_pred HHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 216 ETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 216 ~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
.+.+ ...|+||..-|-.......+++.+.. .++++.+++.
T Consensus 80 ~~~~----------~~aDlVi~av~~~~~~~~~v~~~l~~--~~~~~~il~s 119 (283)
T 4e12_A 80 AQAV----------KDADLVIEAVPESLDLKRDIYTKLGE--LAPAKTIFAT 119 (283)
T ss_dssp HHHT----------TTCSEEEECCCSCHHHHHHHHHHHHH--HSCTTCEEEE
T ss_pred HHHh----------ccCCEEEEeccCcHHHHHHHHHHHHh--hCCCCcEEEE
Confidence 3322 45799998765432233455555543 5677776654
No 422
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=75.22 E-value=23 Score=26.38 Aligned_cols=69 Identities=14% Similarity=0.034 Sum_probs=45.3
Q ss_pred CCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 178 CSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 178 a~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
..+|..||-++... +..+.-++..|+. + ....+..+.+.... ...+|+|++|--....+..++++.+.+
T Consensus 7 ~~~ilivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFR-SLLDSWFSSLGAT--T-VLAADGVDALELLG-----GFTPDLMICDIAMPRMNGLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESCHHHHHHHHT-----TCCCSEEEECCC-----CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHH-HHHHHHHHhCCce--E-EEeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHh
Confidence 34799999999987 8888888887763 3 34567777666553 467999999953222233455666653
No 423
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.06 E-value=19 Score=31.38 Aligned_cols=81 Identities=12% Similarity=0.014 Sum_probs=50.6
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 4 l~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 4 MKEKVVIITGGS-SGMGKGMATRFAKEGA-RVVITGRTKEKL-EEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 457788877754 445543 456676 699999999987 76666555443 458889988754321 1 10000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 79 ~~~g~id~lv~nA 91 (257)
T 3imf_A 79 EKFGRIDILINNA 91 (257)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0114789999875
No 424
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=75.00 E-value=30 Score=31.75 Aligned_cols=112 Identities=15% Similarity=0.031 Sum_probs=65.4
Q ss_pred CeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC--CCceEEEEecHHH-HHHHHhhhcCCCCCcc
Q 021116 157 GRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF--LDVSSIHTVRVET-FLERAEQFVGKDGPFD 233 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl--~~~v~ii~gD~~~-~l~~~~~~~~~~~~fD 233 (317)
.-|++||||.=+.+..+......+++=|| .|..+ +..++-+...+. .++.+++.+|+.+ |+..+...-......=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi-~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVL-AYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHH-HHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHH-HHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCE
Confidence 46999999998886644322224688888 68887 777766665442 3567889999875 3333211000111223
Q ss_pred EEEECC--CCCCc-cHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 234 YMSVTP--PYTAV-DYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 234 lV~~dP--Py~~~-~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
++++-. .|... ....+++.+.+ .+.+|+.+++++...
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~--~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGG--LSAVGSRIAVETSPL 221 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHH--TCCTTCEEEEECCCT
T ss_pred EEEEechHhhCCHHHHHHHHHHHHH--hCCCCeEEEEEecCC
Confidence 444432 12211 23455666553 567999999987643
No 425
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=74.42 E-value=28 Score=26.88 Aligned_cols=82 Identities=11% Similarity=0.016 Sum_probs=51.8
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|... +.....+..+.+..+. ...+|+|++|.-....+..++++.+.+
T Consensus 16 ~~iLivdd~~~~~-~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~--- 85 (152)
T 3eul_A 16 VRVVVGDDHPLFR-EGVVRALSLSGSVN-VVGEADDGAAALELIK-----AHLPDVALLDYRMPGMDGAQVAAAVRS--- 85 (152)
T ss_dssp EEEEEECSSHHHH-HHHHHHHHHHSSEE-EEEEESSHHHHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHH---
T ss_pred EEEEEEcCCHHHH-HHHHHHHhhCCCeE-EEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHh---
Confidence 4799999999987 88888888776321 2224566666665543 246999999853322345566777654
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..++..+++-..
T Consensus 86 ~~~~~~ii~~s~ 97 (152)
T 3eul_A 86 YELPTRVLLISA 97 (152)
T ss_dssp TTCSCEEEEEES
T ss_pred cCCCCeEEEEEc
Confidence 234444544443
No 426
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.26 E-value=19 Score=29.49 Aligned_cols=96 Identities=16% Similarity=0.078 Sum_probs=53.4
Q ss_pred CCCeEEEECCCcchHHHHHH----Hc-CCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH--HHHHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIEAI----SR-GCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ieaa----s~-Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~--l~~~~~~~~ 227 (317)
.+.+|+=+| .|.+|..++ .. |. +|+++|.|++.+ +.+++ .|. .++.+|..+. +... .
T Consensus 38 ~~~~v~IiG--~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~-~~~~~----~g~----~~~~gd~~~~~~l~~~----~ 101 (183)
T 3c85_A 38 GHAQVLILG--MGRIGTGAYDELRARYGK-ISLGIEIREEAA-QQHRS----EGR----NVISGDATDPDFWERI----L 101 (183)
T ss_dssp TTCSEEEEC--CSHHHHHHHHHHHHHHCS-CEEEEESCHHHH-HHHHH----TTC----CEEECCTTCHHHHHTB----C
T ss_pred CCCcEEEEC--CCHHHHHHHHHHHhccCC-eEEEEECCHHHH-HHHHH----CCC----CEEEcCCCCHHHHHhc----c
Confidence 456787665 466665432 34 65 599999999887 66542 343 3566776432 2211 0
Q ss_pred CCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
.-..+|+|++--|-. ......+..+. .+.++..+++...
T Consensus 102 ~~~~ad~vi~~~~~~-~~~~~~~~~~~---~~~~~~~ii~~~~ 140 (183)
T 3c85_A 102 DTGHVKLVLLAMPHH-QGNQTALEQLQ---RRNYKGQIAAIAE 140 (183)
T ss_dssp SCCCCCEEEECCSSH-HHHHHHHHHHH---HTTCCSEEEEEES
T ss_pred CCCCCCEEEEeCCCh-HHHHHHHHHHH---HHCCCCEEEEEEC
Confidence 124689999854321 11122223332 3566777777654
No 427
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=73.97 E-value=39 Score=29.46 Aligned_cols=82 Identities=12% Similarity=0.050 Sum_probs=50.5
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHhHHHhCCCCceEEEEecHHH
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin------------~~al~~~ar~N~~~~gl~~~v~ii~gD~~~ 217 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++.+|+.+
T Consensus 11 l~gk~vlVTGas~-gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~ 85 (278)
T 3sx2_A 11 LTGKVAFITGAAR-GQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEEL-AATVKLVEDIG--SRIVARQADVRD 85 (278)
T ss_dssp TTTCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHH-HHHHHHHHHHT--CCEEEEECCTTC
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHH-HHHHHHHHhcC--CeEEEEeCCCCC
Confidence 4678888888654 44443 456776 69999987 6666 55555555555 358889998754
Q ss_pred HHH---HHhhhcCCCCCccEEEECCC
Q 021116 218 FLE---RAEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 218 ~l~---~~~~~~~~~~~fDlV~~dPP 240 (317)
... ...+....-+..|++|.+.-
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 321 11000001147899998753
No 428
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=73.94 E-value=21 Score=27.15 Aligned_cols=68 Identities=7% Similarity=0.062 Sum_probs=45.0
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEEEecHHHHHHHHhhhcCCC-CCccEEEECCCCC-CccHHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLERAEQFVGKD-GPFDYMSVTPPYT-AVDYEVLMAQISK 255 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii~gD~~~~l~~~~~~~~~~-~~fDlV~~dPPy~-~~~~~~~l~~L~~ 255 (317)
.+|..||-++... +..+.-++. .|+. +. ...+..+.+..+ .. ..+|+|++|--.. ..+..++++.+.+
T Consensus 5 ~~ilivdd~~~~~-~~l~~~L~~~~~~~--v~-~~~~~~~a~~~l-----~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3lua_A 5 GTVLLIDYFEYER-EKTKIIFDNIGEYD--FI-EVENLKKFYSIF-----KDLDSITLIIMDIAFPVEKEGLEVLSAIRN 75 (140)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHHCCCE--EE-EECSHHHHHTTT-----TTCCCCSEEEECSCSSSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHH-HHHHHHHHhccCcc--EE-EECCHHHHHHHH-----hcCCCCcEEEEeCCCCCCCcHHHHHHHHHh
Confidence 4799999999987 888888887 6652 33 556666666443 24 6799999995322 2233455555543
No 429
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=73.89 E-value=38 Score=29.15 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=50.5
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 5 l~~k~~lVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 5 LQGKVALITGAS-SGIGEATARALAAEGA-AVAIAARRVEKL-RALGDELTAAG--AKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TTTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 457788888865 455543 445676 699999999887 66666665544 347888888754321 1 10000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 80 ~~~g~id~lv~nA 92 (247)
T 2jah_A 80 EALGGLDILVNNA 92 (247)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0114789999864
No 430
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=73.81 E-value=1.9 Score=38.87 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=32.4
Q ss_pred ceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCc-----------cHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 207 VSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAV-----------DYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 207 ~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~-----------~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
++++.+.|..+.+ ..+=|+|++||||... ++.++.+.+.. +-+.|+.++++..
T Consensus 149 ~v~i~~~Df~~~i---------~~~~~fvY~DPPY~~~~~~Y~~~f~~~d~~~L~~~l~~--l~~~g~~~~lS~~ 212 (259)
T 1yf3_A 149 KIIFSSLHFKDVK---------ILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDS--LNDRGIKFGLSNV 212 (259)
T ss_dssp GEEEECCCGGGCC---------CCTTEEEEECCCCTTSCCGGGGGCCHHHHHHHHHHHHH--HHTTTCEEEEEEE
T ss_pred CCEEEcCCHHHHh---------CCCCeEEEECCCCCCccchhccCCCHHHHHHHHHHHHH--HhhCCCEEEEEee
Confidence 3677778877654 1344899999999531 23444444432 2244677777765
No 431
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=73.72 E-value=25 Score=26.15 Aligned_cols=67 Identities=15% Similarity=0.140 Sum_probs=45.9
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQIS 254 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~ 254 (317)
.+|..||-++... +..+..++..|+. + ....|..+.+.... ...+|+|++|--....+--++++.+.
T Consensus 3 ~~ILivdd~~~~~-~~l~~~l~~~g~~--v-~~~~~~~~al~~l~-----~~~~dlvllD~~~p~~~g~~~~~~l~ 69 (122)
T 3gl9_A 3 KKVLLVDDSAVLR-KIVSFNLKKEGYE--V-IEAENGQIALEKLS-----EFTPDLIVLXIMMPVMDGFTVLKKLQ 69 (122)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHT-----TBCCSEEEECSCCSSSCHHHHHHHHH
T ss_pred ceEEEEeCCHHHH-HHHHHHHHHCCcE--E-EEeCCHHHHHHHHH-----hcCCCEEEEeccCCCCcHHHHHHHHH
Confidence 3689999999987 8888888887763 3 34567777666553 45799999985222224455666665
No 432
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=73.66 E-value=23 Score=31.04 Aligned_cols=82 Identities=7% Similarity=-0.027 Sum_probs=51.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|+ +|.+|.+ +++.|+ +|++++.++..+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 29 l~~k~vlITGa-sggIG~~la~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 29 VTGEIVLITGA-GHGIGRLTAYEFAKLKS-KLVLWDINKHGL-EETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEEcCHHHH-HHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHH
Confidence 45778887775 4566654 345676 699999999887 66666665544 358889998754321 1 11000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+.+|+||.+.-
T Consensus 104 ~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 AEIGDVSILVNNAG 117 (272)
T ss_dssp HHTCCCSEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 11247899998753
No 433
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=73.65 E-value=31 Score=27.08 Aligned_cols=95 Identities=15% Similarity=0.018 Sum_probs=54.8
Q ss_pred CeEEEECCCcchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHH--HHHHhhhcCCCC
Q 021116 157 GRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETF--LERAEQFVGKDG 230 (317)
Q Consensus 157 ~rVLDlgcGtG~l~Ieaa----s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~--l~~~~~~~~~~~ 230 (317)
.+|+=+|| |.+|..++ ..|. .|+++|.|++.+ +.+++ .| +.++.+|+.+. +... .-.
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~-~~~~~----~g----~~~i~gd~~~~~~l~~a-----~i~ 70 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDI-PLVVIETSRTRV-DELRE----RG----VRAVLGNAANEEIMQLA-----HLE 70 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTC-CEEEEESCHHHH-HHHHH----TT----CEEEESCTTSHHHHHHT-----TGG
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCC-CEEEEECCHHHH-HHHHH----cC----CCEEECCCCCHHHHHhc-----Ccc
Confidence 45666655 55665432 3565 599999999987 66653 33 45788887543 3222 124
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeCCC
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYPLR 272 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~~~ 272 (317)
.+|+|++--|-.... ..+...+ +.+.++..++......
T Consensus 71 ~ad~vi~~~~~~~~n-~~~~~~a---~~~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 71 CAKWLILTIPNGYEA-GEIVASA---RAKNPDIEIIARAHYD 108 (140)
T ss_dssp GCSEEEECCSCHHHH-HHHHHHH---HHHCSSSEEEEEESSH
T ss_pred cCCEEEEECCChHHH-HHHHHHH---HHHCCCCeEEEEECCH
Confidence 689999865422111 1112222 2467777877766533
No 434
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=73.60 E-value=26 Score=30.88 Aligned_cols=82 Identities=11% Similarity=0.018 Sum_probs=51.6
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.++.++..+ +.+.+.++..+. ++.++..|+.+... . .....
T Consensus 26 l~~k~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 26 LDKQVAIVTGAS-RGIGRAIALELARRGA-MVIGTATTEAGA-EGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TTTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHH
Confidence 457788877754 444443 456776 799999999987 777777766654 36788888754321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|++|.+.-
T Consensus 101 ~~~g~iD~lvnnAg 114 (270)
T 3ftp_A 101 KEFGALNVLVNNAG 114 (270)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01147899998753
No 435
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=73.60 E-value=24 Score=31.18 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=50.2
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeC-CHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH--HH-Hhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-DPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL--ER-AEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDi-n~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l--~~-~~~~ 225 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++. +++.+ +.+.+.+...+ .++.++.+|+.+.. .. ....
T Consensus 27 ~~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 27 KARPVAIVTGGRRG-IGLGIARALAASGF-DIAITGIGDAEGV-APVIAELSGLG--ARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp CCCCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCCHHHH-HHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHH
T ss_pred cCCCEEEEecCCCH-HHHHHHHHHHHCCC-eEEEEeCCCHHHH-HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 46788888886554 4433 456776 6999995 77776 66666666554 35888998875431 11 1000
Q ss_pred cCCCCCccEEEECCC
Q 021116 226 VGKDGPFDYMSVTPP 240 (317)
Q Consensus 226 ~~~~~~fDlV~~dPP 240 (317)
...-+..|++|.+.-
T Consensus 102 ~~~~g~iD~lvnnAg 116 (280)
T 4da9_A 102 VAEFGRIDCLVNNAG 116 (280)
T ss_dssp HHHHSCCCEEEEECC
T ss_pred HHHcCCCCEEEECCC
Confidence 001147899998753
No 436
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=73.55 E-value=27 Score=30.36 Aligned_cols=82 Identities=13% Similarity=0.061 Sum_probs=52.3
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.++..+ +.+.+.+...+ .++.++.+|+.+... . .....
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGSLGA-RVVLTARDVEKL-RAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHH
Confidence 356788877754 556554 345676 699999999987 77777766554 358889988754321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 102 ~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 102 AAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 01256899998754
No 437
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=73.54 E-value=27 Score=30.97 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=51.0
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.+.+.+ +.+.+.+...+ .++.++.+|+.+... . ..+..
T Consensus 26 ~~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 26 QPSPVALITGAGSG-IGRATALALAADGV-TVGALGRTRTEV-EEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp -CCCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 35778888886554 4443 456676 799999999887 66666655443 358889998764321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|++|.+.-
T Consensus 101 ~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 101 LKFGHLDIVVANAG 114 (283)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 01257899998653
No 438
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=73.50 E-value=34 Score=29.70 Aligned_cols=81 Identities=14% Similarity=0.185 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... ......
T Consensus 5 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 5 FNGKVCLVTGAG-GNIGLATALRLAEEGT-AIALLDMNREAL-EKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 457788877765 445544 445676 699999999887 66666555444 347888888754321 000000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 80 ~~~g~id~lv~nA 92 (262)
T 1zem_A 80 RDFGKIDFLFNNA 92 (262)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 0114689999875
No 439
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=73.35 E-value=16 Score=31.84 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=50.0
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|+ +|.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 3 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 3 MNGQVCVVTGA-SRGIGRGIALQLCKAGA-TVYITGRHLDTL-RVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TTTCEEEESST-TSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCC-CchHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 35677777775 4555554 345676 699999999887 66655555444 357888888754321 1 11000
Q ss_pred CC-CCCccEEEECC
Q 021116 227 GK-DGPFDYMSVTP 239 (317)
Q Consensus 227 ~~-~~~fDlV~~dP 239 (317)
.. .+..|++|.+.
T Consensus 78 ~~~~g~id~lvnnA 91 (260)
T 2qq5_A 78 REQQGRLDVLVNNA 91 (260)
T ss_dssp HHHTTCCCEEEECC
T ss_pred HhcCCCceEEEECC
Confidence 00 25689999876
No 440
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=73.16 E-value=30 Score=26.71 Aligned_cols=69 Identities=10% Similarity=0.052 Sum_probs=44.9
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
.+|..||-++... +..+.-++. .|+. +.....+..+.+..+. ...+|+|++|.-....+..++++.+.+
T Consensus 6 ~~ILivdd~~~~~-~~l~~~L~~~~~~~--v~~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~ 75 (153)
T 3cz5_A 6 ARIMLVDDHPIVR-EGYRRLIERRPGYA--VVAEAADAGEAYRLYR-----ETTPDIVVMDLTLPGPGGIEATRHIRQ 75 (153)
T ss_dssp EEEEEECSCHHHH-HHHHHHHTTSTTEE--EEEEESSHHHHHHHHH-----TTCCSEEEECSCCSSSCHHHHHHHHHH
T ss_pred cEEEEECCcHHHH-HHHHHHHhhCCCcE--EEEEeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHH
Confidence 4699999999987 888877765 4431 2224567776665553 356999999964322344566666654
No 441
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=73.15 E-value=30 Score=26.73 Aligned_cols=79 Identities=18% Similarity=0.064 Sum_probs=50.8
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. +. ...+..+.+..+. ...+|+|++|.-....+..++++.+..
T Consensus 8 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~--- 75 (154)
T 2rjn_A 8 YTVMLVDDEQPIL-NSLKRLIKRLGCN--II-TFTSPLDALEALK-----GTSVQLVISDMRMPEMGGEVFLEQVAK--- 75 (154)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHTTTCE--EE-EESCHHHHHHHHT-----TSCCSEEEEESSCSSSCHHHHHHHHHH---
T ss_pred CeEEEEcCCHHHH-HHHHHHHHHcCCe--EE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHH---
Confidence 4799999999987 8888888877652 33 4566666665543 356999999853322344556666653
Q ss_pred cCCCeEEEEEe
Q 021116 259 VGKDSFIVVEY 269 (317)
Q Consensus 259 LkpgG~ivv~~ 269 (317)
..++.-+++..
T Consensus 76 ~~~~~~ii~ls 86 (154)
T 2rjn_A 76 SYPDIERVVIS 86 (154)
T ss_dssp HCTTSEEEEEE
T ss_pred hCCCCcEEEEe
Confidence 23444444433
No 442
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=73.15 E-value=40 Score=29.62 Aligned_cols=81 Identities=17% Similarity=0.134 Sum_probs=50.4
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|++++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 20 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 20 QDSEVALVTGAT-SGIGLEIARRLGKEGL-RVFVCARGEEGL-RTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVV 94 (277)
T ss_dssp TTSCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 356788888865 555544 345676 699999999887 66666665544 347888888754321 1 11000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 95 ~~~g~iD~lv~~A 107 (277)
T 2rhc_B 95 ERYGPVDVLVNNA 107 (277)
T ss_dssp HHTCSCSEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 1124789999875
No 443
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=73.05 E-value=7.4 Score=36.07 Aligned_cols=90 Identities=17% Similarity=0.117 Sum_probs=52.6
Q ss_pred CCeEEEECCCcchHHHHH---H-HcCCCEEEEEeCCH---HHHHHHHHHhHHHhCCCCceEEEEe-cHHHHHHHHhhhcC
Q 021116 156 PGRWLDLYSGTGSVGIEA---I-SRGCSEVHFVEMDP---WVVSNVLIPNLEWTGFLDVSSIHTV-RVETFLERAEQFVG 227 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Iea---a-s~Ga~~V~aVDin~---~al~~~ar~N~~~~gl~~~v~ii~g-D~~~~l~~~~~~~~ 227 (317)
+++||-.|+ |.+|..+ + ..|+ +|+++|.++ +.+ +.+++ +|.+ .+ .. |+.+.+.. .
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~-~~~~~----~ga~-~v---~~~~~~~~~~~-~---- 243 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTYGL-EVWMANRREPTEVEQ-TVIEE----TKTN-YY---NSSNGYDKLKD-S---- 243 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHHTC-EEEEEESSCCCHHHH-HHHHH----HTCE-EE---ECTTCSHHHHH-H----
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEeCCccchHHH-HHHHH----hCCc-ee---chHHHHHHHHH-h----
Confidence 899999997 5555543 3 3677 899999987 776 66653 4542 12 11 22122211 1
Q ss_pred CCCCccEEEECCCCCCccHHHHH-HHHHHcCCcCCCeEEEEEeC
Q 021116 228 KDGPFDYMSVTPPYTAVDYEVLM-AQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 228 ~~~~fDlV~~dPPy~~~~~~~~l-~~L~~~~lLkpgG~ivv~~~ 270 (317)
...+|+||-.-... ..+ +... +.|+++|.++..-.
T Consensus 244 -~~~~d~vid~~g~~-----~~~~~~~~--~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 244 -VGKFDVIIDATGAD-----VNILGNVI--PLLGRNGVLGLFGF 279 (366)
T ss_dssp -HCCEEEEEECCCCC-----THHHHHHG--GGEEEEEEEEECSC
T ss_pred -CCCCCEEEECCCCh-----HHHHHHHH--HHHhcCCEEEEEec
Confidence 15699998754211 122 3332 36899999886543
No 444
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=73.02 E-value=27 Score=26.22 Aligned_cols=83 Identities=10% Similarity=-0.037 Sum_probs=51.4
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSA 257 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~ 257 (317)
.+|..+|-++... +..+.-++. .|+. +.....+..+.+..+. ...+|+|++|.-....+..++++.+.+.
T Consensus 9 ~~iLivdd~~~~~-~~l~~~L~~~~~~~--~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~- 79 (143)
T 3cnb_A 9 FSILIIEDDKEFA-DMLTQFLENLFPYA--KIKIAYNPFDAGDLLH-----TVKPDVVMLDLMMVGMDGFSICHRIKST- 79 (143)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHHCTTC--EEEEECSHHHHHHHHH-----HTCCSEEEEETTCTTSCHHHHHHHHHTS-
T ss_pred ceEEEEECCHHHH-HHHHHHHHhccCcc--EEEEECCHHHHHHHHH-----hcCCCEEEEecccCCCcHHHHHHHHHhC-
Confidence 4699999999987 888888887 6763 2334556666655443 2569999998533222445666666531
Q ss_pred CcCCCeEEEEEeC
Q 021116 258 LVGKDSFIVVEYP 270 (317)
Q Consensus 258 lLkpgG~ivv~~~ 270 (317)
...++..+++...
T Consensus 80 ~~~~~~~ii~~s~ 92 (143)
T 3cnb_A 80 PATANIIVIAMTG 92 (143)
T ss_dssp TTTTTSEEEEEES
T ss_pred ccccCCcEEEEeC
Confidence 1234444444443
No 445
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=73.02 E-value=14 Score=28.30 Aligned_cols=67 Identities=10% Similarity=0.008 Sum_probs=44.8
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQIS 254 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~ 254 (317)
.+|..||-++... +..+..++..|+. +. ...+..+.+..+. ...+|+||+|--....+..++++.+.
T Consensus 9 ~~iLivd~~~~~~-~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~ 75 (147)
T 2zay_A 9 WRIMLVDTQLPAL-AASISALSQEGFD--II-QCGNAIEAVPVAV-----KTHPHLIITEANMPKISGMDLFNSLK 75 (147)
T ss_dssp EEEEEECTTGGGG-HHHHHHHHHHTEE--EE-EESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred ceEEEEeCCHHHH-HHHHHHHHHcCCe--EE-EeCCHHHHHHHHH-----cCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 3699999999887 8888888877752 33 4456666655443 24699999985332234456666665
No 446
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=72.87 E-value=40 Score=30.00 Aligned_cols=81 Identities=15% Similarity=0.121 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCcchHHH----HHHHcCCCEEEEEeCC------------HHHHHHHHHHhHHHhCCCCceEEEEecHHH
Q 021116 154 LRPGRWLDLYSGTGSVGI----EAISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~I----eaas~Ga~~V~aVDin------------~~al~~~ar~N~~~~gl~~~v~ii~gD~~~ 217 (317)
..++++|=-|++.| +|. .+++.|+ +|+.+|.+ ++.+ +.+.+.++..+ .++.++..|+.+
T Consensus 26 l~gk~~lVTGas~G-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARG-QGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDL-AETVRQVEALG--RRIIASQVDVRD 100 (299)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHH-HHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHH-HHHHHHHHhcC--CceEEEECCCCC
Confidence 46788988887655 443 3456776 69999987 6666 55555555554 358889998754
Q ss_pred HHH--H-HhhhcCCCCCccEEEECC
Q 021116 218 FLE--R-AEQFVGKDGPFDYMSVTP 239 (317)
Q Consensus 218 ~l~--~-~~~~~~~~~~fDlV~~dP 239 (317)
... . .......-+..|++|.+.
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECC
Confidence 321 1 100000115789999864
No 447
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=72.79 E-value=25 Score=25.68 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=43.6
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
+|..+|-++... +..+..++..|+. +.....+..+.+.... ...+|+|++|.-....+..++++.+.+
T Consensus 4 ~ilivdd~~~~~-~~l~~~l~~~g~~--vv~~~~~~~~a~~~~~-----~~~~dlil~D~~l~~~~g~~~~~~l~~ 71 (120)
T 1tmy_A 4 RVLIVDDAAFMR-MMLKDIITKAGYE--VAGEATNGREAVEKYK-----ELKPDIVTMDITMPEMNGIDAIKEIMK 71 (120)
T ss_dssp EEEEECSCHHHH-HHHHHHHHHTTCE--EEEEESSHHHHHHHHH-----HHCCSEEEEECSCGGGCHHHHHHHHHH
T ss_pred eEEEEcCcHHHH-HHHHHHHhhcCcE--EEEEECCHHHHHHHHH-----hcCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 689999999987 8888888876652 2234556666655443 246899999853211233456666653
No 448
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=72.76 E-value=13 Score=35.44 Aligned_cols=46 Identities=17% Similarity=-0.033 Sum_probs=30.6
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHhHHHhCCC
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIPNLEWTGFL 205 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~N~~~~gl~ 205 (317)
.++++||=.|+ |.|.+++.+++ .|+ +|++++.+++.+ +.++ .+|..
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~-~~~~----~lGa~ 267 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKE-AAVR----ALGCD 267 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHH----HTTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHH----hcCCC
Confidence 46889998775 23444444444 565 799999999887 7764 35653
No 449
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=72.70 E-value=31 Score=26.68 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=51.0
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. + ....+..+.+..+. ...||+|++|--....+..++++.+.+
T Consensus 15 ~~ILivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~--- 82 (153)
T 3hv2_A 15 PEILLVDSQEVIL-QRLQQLLSPLPYT--L-HFARDATQALQLLA-----SREVDLVISAAHLPQMDGPTLLARIHQ--- 82 (153)
T ss_dssp CEEEEECSCHHHH-HHHHHHHTTSSCE--E-EEESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHH---
T ss_pred ceEEEECCCHHHH-HHHHHHhcccCcE--E-EEECCHHHHHHHHH-----cCCCCEEEEeCCCCcCcHHHHHHHHHh---
Confidence 4799999999987 8888888776652 3 24456666665543 257999999853322344556666653
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..++..+++-..
T Consensus 83 ~~~~~~ii~~s~ 94 (153)
T 3hv2_A 83 QYPSTTRILLTG 94 (153)
T ss_dssp HCTTSEEEEECC
T ss_pred HCCCCeEEEEEC
Confidence 234444544443
No 450
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=72.59 E-value=28 Score=26.16 Aligned_cols=78 Identities=12% Similarity=-0.080 Sum_probs=49.7
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCc
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALV 259 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lL 259 (317)
+|..||-++... +..+.-++..+.. + ....+..+.+..+. ...+|+|++|.-....+..++++.+.+ .
T Consensus 9 ~ilivdd~~~~~-~~l~~~L~~~~~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~---~ 76 (137)
T 3hdg_A 9 KILIVEDDTDAR-EWLSTIISNHFPE--V-WSAGDGEEGERLFG-----LHAPDVIITDIRMPKLGGLEMLDRIKA---G 76 (137)
T ss_dssp CEEEECSCHHHH-HHHHHHHHTTCSC--E-EEESSHHHHHHHHH-----HHCCSEEEECSSCSSSCHHHHHHHHHH---T
T ss_pred EEEEEeCCHHHH-HHHHHHHHhcCcE--E-EEECCHHHHHHHHh-----ccCCCEEEEeCCCCCCCHHHHHHHHHh---c
Confidence 699999999987 8888888765542 3 34556666665543 246999999954333344566777654 2
Q ss_pred CCCeEEEEEe
Q 021116 260 GKDSFIVVEY 269 (317)
Q Consensus 260 kpgG~ivv~~ 269 (317)
.++..+++..
T Consensus 77 ~~~~~ii~~s 86 (137)
T 3hdg_A 77 GAKPYVIVIS 86 (137)
T ss_dssp TCCCEEEECC
T ss_pred CCCCcEEEEe
Confidence 3444444433
No 451
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=72.34 E-value=35 Score=27.14 Aligned_cols=83 Identities=13% Similarity=0.097 Sum_probs=52.3
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCc
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALV 259 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lL 259 (317)
+|..||=|+... +..+.-++..|+.. + ....|..+.+..+. ...||+|++|---..-+--++++.+.+....
T Consensus 14 rILiVDD~~~~r-~~l~~~L~~~G~~~-v-~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir~~~~~ 85 (134)
T 3to5_A 14 KILIVDDFSTMR-RIVKNLLRDLGFNN-T-QEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIRADEEL 85 (134)
T ss_dssp CEEEECSCHHHH-HHHHHHHHHTTCCC-E-EEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHHSTTT
T ss_pred EEEEEeCCHHHH-HHHHHHHHHcCCcE-E-EEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHHhCCCC
Confidence 599999999997 99999999998752 2 23457666665543 2579999998311111345667777543222
Q ss_pred CCCeEEEEEeC
Q 021116 260 GKDSFIVVEYP 270 (317)
Q Consensus 260 kpgG~ivv~~~ 270 (317)
+.=-+|+++..
T Consensus 86 ~~ipvI~lTa~ 96 (134)
T 3to5_A 86 KHLPVLMITAE 96 (134)
T ss_dssp TTCCEEEEESS
T ss_pred CCCeEEEEECC
Confidence 22224555443
No 452
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=72.28 E-value=34 Score=30.16 Aligned_cols=81 Identities=19% Similarity=0.166 Sum_probs=50.0
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~~ 227 (317)
.++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... .......
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGI-AVYGCARDAKNV-SAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467888888654 44443 456676 699999999987 76666665544 358889998754321 0100000
Q ss_pred CCCCccEEEECCC
Q 021116 228 KDGPFDYMSVTPP 240 (317)
Q Consensus 228 ~~~~fDlV~~dPP 240 (317)
.-+..|++|.+.-
T Consensus 98 ~~g~id~lv~nAg 110 (279)
T 3sju_A 98 RFGPIGILVNSAG 110 (279)
T ss_dssp HHCSCCEEEECCC
T ss_pred HcCCCcEEEECCC
Confidence 1157899998753
No 453
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=72.24 E-value=29 Score=26.18 Aligned_cols=82 Identities=16% Similarity=0.061 Sum_probs=52.2
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. + ....+..+.+..+. ...+|+|++|--....+..++++.+.+. .
T Consensus 8 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~ 77 (142)
T 3cg4_A 8 GDVMIVDDDAHVR-IAVKTILSDAGFH--I-ISADSGGQCIDLLK-----KGFSGVVLLDIMMPGMDGWDTIRAILDN-S 77 (142)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----TCCCEEEEEESCCSSSCHHHHHHHHHHT-T
T ss_pred CeEEEEcCCHHHH-HHHHHHHHHCCeE--E-EEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhh-c
Confidence 4799999999987 8888888887762 3 34456666665543 3569999998533222445666666531 1
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..+..-+++-..
T Consensus 78 ~~~~~pii~~s~ 89 (142)
T 3cg4_A 78 LEQGIAIVMLTA 89 (142)
T ss_dssp CCTTEEEEEEEC
T ss_pred ccCCCCEEEEEC
Confidence 344555544443
No 454
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.14 E-value=44 Score=29.07 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=50.8
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCC------------HHHHHHHHHHhHHHhCCCCceEEEEecHHH
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMD------------PWVVSNVLIPNLEWTGFLDVSSIHTVRVET 217 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin------------~~al~~~ar~N~~~~gl~~~v~ii~gD~~~ 217 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.+|.+ .+.+ +.+...++..+ .++.++.+|+.+
T Consensus 8 l~gk~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~ 82 (287)
T 3pxx_A 8 VQDKVVLVTGGARG-QGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDL-EEAGLEVEKTG--RKAYTAEVDVRD 82 (287)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHH-HHHHHHHHHTT--SCEEEEECCTTC
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHH-HHHHHHHHhcC--CceEEEEccCCC
Confidence 46788888886554 4443 456676 69999987 6666 66666665554 358889988754
Q ss_pred HHH---HHhhhcCCCCCccEEEECCC
Q 021116 218 FLE---RAEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 218 ~l~---~~~~~~~~~~~fDlV~~dPP 240 (317)
... ...+....-+..|++|.+.-
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 321 01100001147899998753
No 455
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=71.90 E-value=30 Score=26.25 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=45.7
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
.+|..||-++... +..+.-++..|+. + ....+..+.+.... ...+|+|++|--....+-.++++.+.+
T Consensus 5 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~lr~ 72 (136)
T 3t6k_A 5 HTLLIVDDDDTVA-EMLELVLRGAGYE--V-RRAASGEEALQQIY-----KNLPDALICDVLLPGIDGYTLCKRVRQ 72 (136)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred CEEEEEeCCHHHH-HHHHHHHHHCCCE--E-EEeCCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHc
Confidence 4699999999987 8888888877752 3 24456666665543 257999999852222244556666654
No 456
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=71.60 E-value=5.7 Score=38.19 Aligned_cols=42 Identities=17% Similarity=0.067 Sum_probs=29.2
Q ss_pred CCCCeEEEECC--CcchHHHHHHH-cCCCEEEEEeCCHHHHHHHHHH
Q 021116 154 LRPGRWLDLYS--GTGSVGIEAIS-RGCSEVHFVEMDPWVVSNVLIP 197 (317)
Q Consensus 154 ~~~~rVLDlgc--GtG~l~Ieaas-~Ga~~V~aVDin~~al~~~ar~ 197 (317)
.++++||=.|+ |.|.+++.+++ .|+ +|++++.+++.+ +.+++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~-~~~~~ 271 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKA-EICRA 271 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHH-HHHHh
Confidence 46788988875 33444555444 566 799999999887 77753
No 457
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=71.17 E-value=20 Score=31.80 Aligned_cols=77 Identities=9% Similarity=0.061 Sum_probs=48.3
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
..++++|=-|++ |.+|.+ ++++|+ +|+.++.++..+ +.+.+.+ ..++.++..|+.+...-. .+...-
T Consensus 14 l~gk~vlVTGas-~gIG~~~a~~L~~~G~-~V~~~~r~~~~~-~~~~~~~-----~~~~~~~~~Dl~d~~~v~-~~~~~~ 84 (291)
T 3rd5_A 14 FAQRTVVITGAN-SGLGAVTARELARRGA-TVIMAVRDTRKG-EAAARTM-----AGQVEVRELDLQDLSSVR-RFADGV 84 (291)
T ss_dssp CTTCEEEEECCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHTTS-----SSEEEEEECCTTCHHHHH-HHHHTC
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHh-----cCCeeEEEcCCCCHHHHH-HHHHhc
Confidence 467888888765 455544 445676 799999999886 5544332 346889999976542111 000011
Q ss_pred CCccEEEECC
Q 021116 230 GPFDYMSVTP 239 (317)
Q Consensus 230 ~~fDlV~~dP 239 (317)
+..|++|.+.
T Consensus 85 ~~iD~lv~nA 94 (291)
T 3rd5_A 85 SGADVLINNA 94 (291)
T ss_dssp CCEEEEEECC
T ss_pred CCCCEEEECC
Confidence 4789999864
No 458
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=71.11 E-value=34 Score=30.83 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=49.1
Q ss_pred CCCCeEEEECCCcch---HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhcC
Q 021116 154 LRPGRWLDLYSGTGS---VGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFVG 227 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~---l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~~ 227 (317)
++++.+|=-|++.|. ++..+++.|+ +|+.+|.+.+.+ +.+.+. .| .++..+.+|+.+... ...+...
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l-~~~~~~---~g--~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVL-DAAIAE---IG--GGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHH---HC--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHH---cC--CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 578899988887762 2333556787 699999999988 655433 34 346678888654221 0000011
Q ss_pred CCCCccEEEECC
Q 021116 228 KDGPFDYMSVTP 239 (317)
Q Consensus 228 ~~~~fDlV~~dP 239 (317)
.-+..|+++.|.
T Consensus 100 ~~G~iDiLVNNA 111 (273)
T 4fgs_A 100 EAGRIDVLFVNA 111 (273)
T ss_dssp HHSCEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 126789999875
No 459
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=70.99 E-value=29 Score=25.67 Aligned_cols=67 Identities=15% Similarity=0.035 Sum_probs=43.4
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHH
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQIS 254 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~ 254 (317)
+|..+|-++... +..+..++..|+. .+ ....+..+.+.... ...+|+|++|--....+-.++++.+.
T Consensus 8 ~ilivdd~~~~~-~~l~~~L~~~g~~-~v-~~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~ 74 (129)
T 1p6q_A 8 KVLIVDDQVTSR-LLLGDALQQLGFK-QI-TAAGDGEQGMKIMA-----QNPHHLVISDFNMPKMDGLGLLQAVR 74 (129)
T ss_dssp CEEEECSSHHHH-HHHHHHHHTTTCS-CE-ECCSSHHHHHHHHH-----TSCCSEEEECSSSCSSCHHHHHHHHT
T ss_pred eEEEEcCCHHHH-HHHHHHHHHCCCc-EE-EecCCHHHHHHHHH-----cCCCCEEEEeCCCCCCCHHHHHHHHh
Confidence 589999999987 8888888876652 12 23356666655443 35699999985322223445666664
No 460
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=70.95 E-value=26 Score=25.04 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=44.6
Q ss_pred EEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 180 EVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 180 ~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
+|..+|-++... +..+.-++..|+. +. ...+..+.+.... ...+|+|++|.........++++.+..
T Consensus 3 ~iliv~~~~~~~-~~l~~~l~~~g~~--v~-~~~~~~~~~~~l~-----~~~~dlii~d~~~~~~~~~~~~~~l~~ 69 (119)
T 2j48_A 3 HILLLEEEDEAA-TVVCEMLTAAGFK--VI-WLVDGSTALDQLD-----LLQPIVILMAWPPPDQSCLLLLQHLRE 69 (119)
T ss_dssp EEEEECCCHHHH-HHHHHHHHHTTCE--EE-EESCHHHHHHHHH-----HHCCSEEEEECSTTCCTHHHHHHHHHH
T ss_pred EEEEEeCCHHHH-HHHHHHHHhCCcE--EE-EecCHHHHHHHHH-----hcCCCEEEEecCCCCCCHHHHHHHHHh
Confidence 688999999987 8888888877762 43 3456666655443 246899999854322344556666654
No 461
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=70.83 E-value=12 Score=33.82 Aligned_cols=82 Identities=16% Similarity=0.084 Sum_probs=50.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+. .++.++.+|+.+... . .....
T Consensus 39 l~~k~vlVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 39 LSARSVLVTGGTK-GIGRGIATVFARAGA-NVAVAARSPREL-SSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTTC-EEEEEESSGGGG-HHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHH
Confidence 4577888777654 44443 456776 799999999887 666665554442 358889998865321 0 00000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 115 ~~~g~iD~lvnnA 127 (293)
T 3rih_A 115 DAFGALDVVCANA 127 (293)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0125789999875
No 462
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=70.79 E-value=23 Score=30.89 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=49.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.+++.+ +.+.+.+ + .++.++.+|+.+... . .....
T Consensus 6 l~gk~~lVTGas~g-IG~a~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 6 YQGKKAIVIGGTHG-MGLATVRRLVEGGA-EVLLTGRNESNI-ARIREEF---G--PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTTCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHH
Confidence 46788888886554 4443 456776 799999999887 6555443 2 347888888764321 0 00000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|+++.+.-
T Consensus 78 ~~~g~id~lv~nAg 91 (255)
T 4eso_A 78 QTLGAIDLLHINAG 91 (255)
T ss_dssp HHHSSEEEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 01257899998753
No 463
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=70.61 E-value=43 Score=29.30 Aligned_cols=82 Identities=12% Similarity=0.083 Sum_probs=50.6
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeC-------------CHHHHHHHHHHhHHHhCCCCceEEEEecHH
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEM-------------DPWVVSNVLIPNLEWTGFLDVSSIHTVRVE 216 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDi-------------n~~al~~~ar~N~~~~gl~~~v~ii~gD~~ 216 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.+|. +++.+ +.+.+.++..+ .++.++..|+.
T Consensus 13 l~gk~~lVTGas~g-IG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~Dv~ 87 (280)
T 3pgx_A 13 LQGRVAFITGAARG-QGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDL-DETARLVEDQG--RKALTRVLDVR 87 (280)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHH-HHHHHHHHTTT--CCEEEEECCTT
T ss_pred cCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHH-HHHHHHHHhcC--CeEEEEEcCCC
Confidence 46788888886654 4443 456776 6999998 67776 66666555554 35788888875
Q ss_pred HHHH--H-HhhhcCCCCCccEEEECCC
Q 021116 217 TFLE--R-AEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 217 ~~l~--~-~~~~~~~~~~fDlV~~dPP 240 (317)
+... . .......-+..|++|.+.-
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4321 1 0000001157899998753
No 464
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=70.52 E-value=63 Score=29.70 Aligned_cols=101 Identities=15% Similarity=0.008 Sum_probs=57.0
Q ss_pred CCeEEEECCCcchHHHH--HHHcCCCEEEEEeCCHHHHHHHHHHhHHH----hCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 156 PGRWLDLYSGTGSVGIE--AISRGCSEVHFVEMDPWVVSNVLIPNLEW----TGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ie--aas~Ga~~V~aVDin~~al~~~ar~N~~~----~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
..+|.=+|+|+=..++. ++..|...|+.+|++++.+ +....++.+ .+...+++. ..|..+.+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~-~~~~~~l~~~~~~~~~~~~i~~-t~d~~ea~---------- 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP-EGKALDLSHVTSVVDTNVSVRA-EYSYEAAL---------- 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH-HHHHHHHHHHHHHTTCCCCEEE-ECSHHHHH----------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHH-HHHHHHHHhhhhccCCCCEEEE-eCCHHHHh----------
Confidence 45788888755444443 3345653599999999776 553333332 233333432 36765333
Q ss_pred CCccEEEECC--CCCCcc-----------------HHHHHHHHHHcCCcCCCeEEEEEeCC
Q 021116 230 GPFDYMSVTP--PYTAVD-----------------YEVLMAQISKSALVGKDSFIVVEYPL 271 (317)
Q Consensus 230 ~~fDlV~~dP--Py~~~~-----------------~~~~l~~L~~~~lLkpgG~ivv~~~~ 271 (317)
...|+||+-- |...+. ..++.+.+.+ ..|++++++..++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~---~~p~a~vi~~tNP 134 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK---YCPKTFIIVVTNP 134 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH---HCTTCEEEECCSS
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH---HCCCcEEEEEcCc
Confidence 4569999753 543222 3444555543 3589998776554
No 465
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=70.36 E-value=24 Score=31.24 Aligned_cols=82 Identities=17% Similarity=0.126 Sum_probs=51.8
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . ..+..
T Consensus 30 l~gk~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGAST-GIGKKVALAYAEAGA-QVAVAARHSDAL-QVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESSGGGG-HHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4678888888654 44443 456676 699999999887 66666666554 347888888754321 1 11000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|++|.+.-
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01147899998753
No 466
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=69.96 E-value=37 Score=29.65 Aligned_cols=81 Identities=10% Similarity=-0.003 Sum_probs=50.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 19 l~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 19 LKGTTALVTGGS-KGIGYAIVEELAGLGA-RVYTCSRNEKEL-DECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp CTTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCc-chHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHH
Confidence 457788888864 555543 345676 699999999887 66555555444 347888888754321 1 10000
Q ss_pred CCC-CCccEEEECC
Q 021116 227 GKD-GPFDYMSVTP 239 (317)
Q Consensus 227 ~~~-~~fDlV~~dP 239 (317)
..- +..|++|.+.
T Consensus 94 ~~~~g~id~lv~nA 107 (273)
T 1ae1_A 94 HVFDGKLNILVNNA 107 (273)
T ss_dssp HHTTSCCCEEEECC
T ss_pred HHcCCCCcEEEECC
Confidence 011 5789999875
No 467
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=69.95 E-value=53 Score=28.28 Aligned_cols=81 Identities=15% Similarity=0.024 Sum_probs=49.3
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHh-CCCCceEEEEecHHHHHH--H-Hhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWT-GFLDVSSIHTVRVETFLE--R-AEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~-gl~~~v~ii~gD~~~~l~--~-~~~~ 225 (317)
..++++|=.|++ |.+|.+ +++.|+ +|++++.+++.+ +.+.+.++.. + .++.++.+|+.+... . ....
T Consensus 5 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~ 79 (263)
T 3ai3_A 5 ISGKVAVITGSS-SGIGLAIAEGFAKEGA-HIVLVARQVDRL-HEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVESV 79 (263)
T ss_dssp CTTCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHH
Confidence 457788877755 455544 445676 799999999877 6555555433 4 247888888754321 1 1000
Q ss_pred cCCCCCccEEEECC
Q 021116 226 VGKDGPFDYMSVTP 239 (317)
Q Consensus 226 ~~~~~~fDlV~~dP 239 (317)
...-+..|++|.+.
T Consensus 80 ~~~~g~id~lv~~A 93 (263)
T 3ai3_A 80 RSSFGGADILVNNA 93 (263)
T ss_dssp HHHHSSCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 00114689999875
No 468
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=69.83 E-value=50 Score=28.94 Aligned_cols=82 Identities=12% Similarity=0.066 Sum_probs=49.8
Q ss_pred CCCCeEEEECCCcchHHH----HHHHcCCCEEEEEeCC----------------HHHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 154 LRPGRWLDLYSGTGSVGI----EAISRGCSEVHFVEMD----------------PWVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~I----eaas~Ga~~V~aVDin----------------~~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
..++++|=-|++.| +|. .+++.|+ +|+.+|.+ .+.+ +.+.+.++..+ .++.++..
T Consensus 9 l~~k~~lVTGas~g-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 83 (286)
T 3uve_A 9 VEGKVAFVTGAARG-QGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDL-AETADLVKGHN--RRIVTAEV 83 (286)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHH-HHHHHHHHTTT--CCEEEEEC
T ss_pred cCCCEEEEeCCCch-HHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHH-HHHHHHHhhcC--CceEEEEc
Confidence 46788888887655 443 3456776 69999987 6666 55555554443 45888998
Q ss_pred cHHHHHH--H-HhhhcCCCCCccEEEECCC
Q 021116 214 RVETFLE--R-AEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 214 D~~~~l~--~-~~~~~~~~~~fDlV~~dPP 240 (317)
|+.+... . .......-+..|++|.+.-
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 8754321 1 1000001147899998753
No 469
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=69.68 E-value=21 Score=31.25 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=48.5
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..++++|=.|++. .+|.+ +++.|+ +|+.++.++..+ +.+.+.+ + .++.++.+|+.+... .....
T Consensus 28 l~~k~vlVTGas~-GIG~aia~~l~~~G~-~Vi~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dl~~~~~v~~~~~~~- 98 (281)
T 3ppi_A 28 FEGASAIVSGGAG-GLGEATVRRLHADGL-GVVIADLAAEKG-KALADEL---G--NRAEFVSTNVTSEDSVLAAIEAA- 98 (281)
T ss_dssp GTTEEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred cCCCEEEEECCCC-hHHHHHHHHHHHCCC-EEEEEeCChHHH-HHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHH-
Confidence 3577888888654 45443 456776 699999999887 5554443 3 458889998765321 11111
Q ss_pred CCCCCccEEEEC
Q 021116 227 GKDGPFDYMSVT 238 (317)
Q Consensus 227 ~~~~~fDlV~~d 238 (317)
...+..|+++.+
T Consensus 99 ~~~~~id~lv~~ 110 (281)
T 3ppi_A 99 NQLGRLRYAVVA 110 (281)
T ss_dssp TTSSEEEEEEEC
T ss_pred HHhCCCCeEEEc
Confidence 223578999987
No 470
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=69.38 E-value=32 Score=25.56 Aligned_cols=67 Identities=18% Similarity=0.058 Sum_probs=43.9
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISK 255 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~ 255 (317)
.+|..||-++... +..+.-++ .++. + ....+..+.+..+. ...+|+|++|.-....+..++++.+.+
T Consensus 5 ~~ilivdd~~~~~-~~l~~~l~-~~~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~ 71 (133)
T 3nhm_A 5 PKVLIVENSWTMR-ETLRLLLS-GEFD--C-TTAADGASGLQQAL-----AHPPDVLISDVNMDGMDGYALCGHFRS 71 (133)
T ss_dssp CEEEEECSCHHHH-HHHHHHHT-TTSE--E-EEESSHHHHHHHHH-----HSCCSEEEECSSCSSSCHHHHHHHHHH
T ss_pred CEEEEEcCCHHHH-HHHHHHHh-CCcE--E-EEECCHHHHHHHHh-----cCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3699999999887 77776665 4432 3 24456666665543 257999999964333345567777764
No 471
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=69.38 E-value=29 Score=29.63 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=48.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
.++++||=.|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.+. +++.++.+|+.+...-. .+...-
T Consensus 12 ~~~k~vlVTGas-~gIG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~-----~~~~~~~~D~~~~~~~~-~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGAS-SGIGSAIARLLHKLGS-KVIISGSNEEKL-KSLGNALK-----DNYTIEVCNLANKEECS-NLISKT 82 (249)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHC-----SSEEEEECCTTSHHHHH-HHHHTC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHhc-----cCccEEEcCCCCHHHHH-HHHHhc
Confidence 568888877765 445543 445676 699999999887 55544332 35788888876532111 110112
Q ss_pred CCccEEEECCC
Q 021116 230 GPFDYMSVTPP 240 (317)
Q Consensus 230 ~~fDlV~~dPP 240 (317)
+..|++|.+.-
T Consensus 83 ~~id~li~~Ag 93 (249)
T 3f9i_A 83 SNLDILVCNAG 93 (249)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899998753
No 472
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=69.22 E-value=50 Score=28.40 Aligned_cols=81 Identities=19% Similarity=0.128 Sum_probs=49.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|+ +|.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 12 l~~k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 12 LENKVALVTAS-TDGIGLAIARRLAQDGA-HVVVSSRKQENV-DRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp TTTCEEEESSC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHH
Confidence 35677887775 4555554 345676 799999999877 66656665544 247788888653211 1 10000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 87 ~~~g~iD~lv~~A 99 (260)
T 2zat_A 87 NLHGGVDILVSNA 99 (260)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0114789999874
No 473
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=69.18 E-value=14 Score=32.62 Aligned_cols=80 Identities=13% Similarity=0.065 Sum_probs=49.5
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH--HHH-hhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL--ERA-EQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l--~~~-~~~~~ 227 (317)
.++++|=.|+ +|.+|.+ ++++|+ +|++++.++..+ +.+.+.+...+- .++.++.+|+.+.. ..+ .....
T Consensus 27 ~~k~vlITGa-sggIG~~la~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 27 QGKKVIVTGA-SKGIGREMAYHLAKMGA-HVVVTARSKETL-QKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHH
Confidence 4678887775 4556654 345676 699999999887 666665555443 34788888876421 111 00000
Q ss_pred CCCCccEEEEC
Q 021116 228 KDGPFDYMSVT 238 (317)
Q Consensus 228 ~~~~fDlV~~d 238 (317)
..+..|++|.+
T Consensus 103 ~~g~iD~li~n 113 (286)
T 1xu9_A 103 LMGGLDMLILN 113 (286)
T ss_dssp HHTSCSEEEEC
T ss_pred HcCCCCEEEEC
Confidence 11478999977
No 474
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=69.03 E-value=11 Score=33.33 Aligned_cols=82 Identities=15% Similarity=0.064 Sum_probs=52.1
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... ......
T Consensus 24 l~gk~~lVTGas~-gIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSR-GLGRAMAEGLAVAGA-RILINGTDPSRV-AQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEECCSCHHHH-HHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 4678888777554 44443 456676 699999999987 76666666555 347888888754321 111111
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 99 ~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 99 EQGIDVDILVNNAG 112 (271)
T ss_dssp HHTCCCCEEEECCC
T ss_pred HHCCCCCEEEECCC
Confidence 11257899998753
No 475
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=68.85 E-value=53 Score=28.66 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=50.2
Q ss_pred CCCCeEEEECCCcchHHH----HHHHcCCCEEEEEeC-------------CHHHHHHHHHHhHHHhCCCCceEEEEecHH
Q 021116 154 LRPGRWLDLYSGTGSVGI----EAISRGCSEVHFVEM-------------DPWVVSNVLIPNLEWTGFLDVSSIHTVRVE 216 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~I----eaas~Ga~~V~aVDi-------------n~~al~~~ar~N~~~~gl~~~v~ii~gD~~ 216 (317)
..++++|=-|++.| +|. .+++.|+ +|+.+|. +.+.+ +.+.+.++..+ .++.++..|+.
T Consensus 9 l~~k~~lVTGas~G-IG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~D~~ 83 (277)
T 3tsc_A 9 LEGRVAFITGAARG-QGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDL-SETVRLVEAAN--RRIVAAVVDTR 83 (277)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHH-HHHHHHHHHTT--CCEEEEECCTT
T ss_pred cCCCEEEEECCccH-HHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHH-HHHHHHHHhcC--CeEEEEECCCC
Confidence 46788888886654 443 3456776 6999998 67776 55555555544 35888888875
Q ss_pred HHHH--H-HhhhcCCCCCccEEEECCC
Q 021116 217 TFLE--R-AEQFVGKDGPFDYMSVTPP 240 (317)
Q Consensus 217 ~~l~--~-~~~~~~~~~~fDlV~~dPP 240 (317)
+... . .......-+..|++|.+.-
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4321 1 1000001157899998753
No 476
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=68.82 E-value=28 Score=31.07 Aligned_cols=83 Identities=6% Similarity=-0.073 Sum_probs=51.7
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCC--CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHH---HHHhhh
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGC--SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFL---ERAEQF 225 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga--~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l---~~~~~~ 225 (317)
.++++|=-|++. .+|.+ +++.|+ .+|+.++.+.+.+ +.+.+.++...-..++.++.+|+.+.. ......
T Consensus 32 ~~k~~lVTGas~-GIG~aia~~l~~~G~~~~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 32 AKKTVLITGASA-GIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred CCCEEEEecCCC-hHHHHHHHHHHHcCCCCceEEEEECCHHHH-HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 467888888654 44543 344565 3799999999988 777666655432345788888875432 111111
Q ss_pred cCCCCCccEEEECC
Q 021116 226 VGKDGPFDYMSVTP 239 (317)
Q Consensus 226 ~~~~~~fDlV~~dP 239 (317)
...-+..|++|.+.
T Consensus 110 ~~~~g~iD~lVnnA 123 (287)
T 3rku_A 110 PQEFKDIDILVNNA 123 (287)
T ss_dssp CGGGCSCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 11224789999865
No 477
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=68.62 E-value=38 Score=29.52 Aligned_cols=81 Identities=14% Similarity=0.048 Sum_probs=49.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHH-hCCCCceEEEEecHHHHHH--H-Hhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEW-TGFLDVSSIHTVRVETFLE--R-AEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~-~gl~~~v~ii~gD~~~~l~--~-~~~~ 225 (317)
..++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.+.. .+ .++.++.+|+.+... . ....
T Consensus 18 l~~k~vlVTGas~-gIG~aia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 18 LDGKRALITGATK-GIGADIARAFAAAGA-RLVLSGRDVSEL-DAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 4577888777654 44443 445676 699999999887 666665544 34 348889988754211 0 0000
Q ss_pred cCCCCCccEEEECC
Q 021116 226 VGKDGPFDYMSVTP 239 (317)
Q Consensus 226 ~~~~~~fDlV~~dP 239 (317)
...-+..|++|.+.
T Consensus 93 ~~~~g~id~lv~nA 106 (266)
T 4egf_A 93 AEAFGGLDVLVNNA 106 (266)
T ss_dssp HHHHTSCSEEEEEC
T ss_pred HHHcCCCCEEEECC
Confidence 00115789999865
No 478
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=68.59 E-value=22 Score=34.83 Aligned_cols=99 Identities=14% Similarity=-0.004 Sum_probs=55.6
Q ss_pred CeEEEECCCc--chHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHh---CCC---------CceEEEEecHHHHHHHH
Q 021116 157 GRWLDLYSGT--GSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWT---GFL---------DVSSIHTVRVETFLERA 222 (317)
Q Consensus 157 ~rVLDlgcGt--G~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~---gl~---------~~v~ii~gD~~~~l~~~ 222 (317)
.+|-=+|+|+ +.++..++..|. .|+.+|++++...+..++|++.. |.- +++++ ..|.. .+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~-al--- 128 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFH-KL--- 128 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGG-GC---
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHH-HH---
Confidence 4677777765 233333556676 69999999984313444555432 210 12332 23432 11
Q ss_pred hhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEeC
Q 021116 223 EQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEYP 270 (317)
Q Consensus 223 ~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~~ 270 (317)
...|+||.--|-......+++..+. ..++++.+|...++
T Consensus 129 -------~~aDlVIeAVpe~~~vk~~v~~~l~--~~~~~~aIlasnTS 167 (460)
T 3k6j_A 129 -------SNCDLIVESVIEDMKLKKELFANLE--NICKSTCIFGTNTS 167 (460)
T ss_dssp -------TTCSEEEECCCSCHHHHHHHHHHHH--TTSCTTCEEEECCS
T ss_pred -------ccCCEEEEcCCCCHHHHHHHHHHHH--hhCCCCCEEEecCC
Confidence 4579999876643222345566665 47888888765444
No 479
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=68.29 E-value=57 Score=27.95 Aligned_cols=79 Identities=19% Similarity=0.175 Sum_probs=48.8
Q ss_pred CCCCeEEEECCCcchHHH----HHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGI----EAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~I----eaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++.| +|. .+++.|+ +|+.++.++..+ +.+.+.+ + .++.++..|+.+... . .....
T Consensus 7 l~~k~vlITGas~g-IG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 7 LEGKVALITGAGSG-FGEGMAKRFAKGGA-KVVIVDRDKAGA-ERVAGEI---G--DAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---C--TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEcCCHHHH-HHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHH
Confidence 46788888887654 333 3456776 699999999887 5554433 2 357888888754321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
...+..|++|.+.-
T Consensus 79 ~~~g~id~li~~Ag 92 (261)
T 3n74_A 79 SKFGKVDILVNNAG 92 (261)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCc
Confidence 01147899998753
No 480
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=68.13 E-value=15 Score=33.83 Aligned_cols=92 Identities=17% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCeEEEECCCcchHHHHH---H-HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCC
Q 021116 155 RPGRWLDLYSGTGSVGIEA---I-SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDG 230 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Iea---a-s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~ 230 (317)
++++||=.|+ |.+|+.+ + ..|+ +|++++.+++.+ +.+++ .+|.+. ++..+-.+.+... .+
T Consensus 180 ~g~~VlV~Ga--G~vG~~a~qlak~~Ga-~Vi~~~~~~~~~-~~~~~---~lGa~~---vi~~~~~~~~~~~------~~ 243 (357)
T 2cf5_A 180 PGLRGGILGL--GGVGHMGVKIAKAMGH-HVTVISSSNKKR-EEALQ---DLGADD---YVIGSDQAKMSEL------AD 243 (357)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHTC-EEEEEESSTTHH-HHHHT---TSCCSC---EEETTCHHHHHHS------TT
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHCCC-eEEEEeCChHHH-HHHHH---HcCCce---eeccccHHHHHHh------cC
Confidence 6889999975 5566543 3 3577 799999998876 66642 356532 2322212223222 24
Q ss_pred CccEEEECCCCCCccHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 231 PFDYMSVTPPYTAVDYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 231 ~fDlV~~dPPy~~~~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
.+|+||-.-... ..+...+ +.|+++|.++..-
T Consensus 244 g~D~vid~~g~~-~~~~~~~------~~l~~~G~iv~~G 275 (357)
T 2cf5_A 244 SLDYVIDTVPVH-HALEPYL------SLLKLDGKLILMG 275 (357)
T ss_dssp TEEEEEECCCSC-CCSHHHH------TTEEEEEEEEECS
T ss_pred CCCEEEECCCCh-HHHHHHH------HHhccCCEEEEeC
Confidence 699998543211 1223322 3789999988753
No 481
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=68.12 E-value=35 Score=30.05 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=49.8
Q ss_pred CCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--HH-hhhcC
Q 021116 155 RPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--RA-EQFVG 227 (317)
Q Consensus 155 ~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~~-~~~~~ 227 (317)
.++++|=-|++. .+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ .++.++.+|+.+... .+ .....
T Consensus 3 ~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 3 MDKVILITGASG-GIGEGIARELGVAGA-KILLGARRQARI-EAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TTCEEEESSTTS-HHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcc-HHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356777777654 44443 446676 699999999987 77766666554 347788888754321 10 00000
Q ss_pred CCCCccEEEECC
Q 021116 228 KDGPFDYMSVTP 239 (317)
Q Consensus 228 ~~~~fDlV~~dP 239 (317)
.-+..|++|.+.
T Consensus 78 ~~g~iD~lVnnA 89 (264)
T 3tfo_A 78 TWGRIDVLVNNA 89 (264)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 115789999875
No 482
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=68.00 E-value=49 Score=29.40 Aligned_cols=81 Identities=14% Similarity=0.064 Sum_probs=50.2
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|++++.+++.+ +.+.+.++..+ .++.++.+|+.+... . .....
T Consensus 32 l~~k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 32 LKGKIALVTGAS-YGIGFAIASAYAKAGA-TIVFNDINQELV-DRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIE 106 (291)
T ss_dssp CTTCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHH
Confidence 457788888764 555544 345676 699999999887 66656565544 347788888754321 1 11000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 107 ~~~g~iD~lvnnA 119 (291)
T 3cxt_A 107 SEVGIIDILVNNA 119 (291)
T ss_dssp HHTCCCCEEEECC
T ss_pred HHcCCCcEEEECC
Confidence 1125689999865
No 483
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=67.77 E-value=50 Score=30.62 Aligned_cols=93 Identities=17% Similarity=0.148 Sum_probs=54.1
Q ss_pred CCCCeEEEECCCcchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Iea----as~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
.++++|+=+|+ |.+|..+ ...|+ +|+.+|.+++.+ +.+++.... .+..+..+..++....
T Consensus 165 l~~~~VlViGa--GgvG~~aa~~a~~~Ga-~V~v~dr~~~r~-~~~~~~~~~-----~~~~~~~~~~~~~~~~------- 228 (361)
T 1pjc_A 165 VKPGKVVILGG--GVVGTEAAKMAVGLGA-QVQIFDINVERL-SYLETLFGS-----RVELLYSNSAEIETAV------- 228 (361)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHGG-----GSEEEECCHHHHHHHH-------
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEeCCHHHH-HHHHHhhCc-----eeEeeeCCHHHHHHHH-------
Confidence 35689999987 5555432 34687 899999999887 776543321 1333333333333222
Q ss_pred CCccEEEECCCCCCc---c--HHHHHHHHHHcCCcCCCeEEEEE
Q 021116 230 GPFDYMSVTPPYTAV---D--YEVLMAQISKSALVGKDSFIVVE 268 (317)
Q Consensus 230 ~~fDlV~~dPPy~~~---~--~~~~l~~L~~~~lLkpgG~ivv~ 268 (317)
..+|+||...+.... . .++. + ..++++|+++..
T Consensus 229 ~~~DvVI~~~~~~~~~~~~li~~~~---~---~~~~~g~~ivdv 266 (361)
T 1pjc_A 229 AEADLLIGAVLVPGRRAPILVPASL---V---EQMRTGSVIVDV 266 (361)
T ss_dssp HTCSEEEECCCCTTSSCCCCBCHHH---H---TTSCTTCEEEET
T ss_pred cCCCEEEECCCcCCCCCCeecCHHH---H---hhCCCCCEEEEE
Confidence 358999876543211 0 1222 2 367899987753
No 484
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=67.40 E-value=21 Score=33.60 Aligned_cols=94 Identities=13% Similarity=0.036 Sum_probs=53.8
Q ss_pred CCCCeEEEECCCcchHHHHHH----HcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCC
Q 021116 154 LRPGRWLDLYSGTGSVGIEAI----SRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKD 229 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ieaa----s~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~ 229 (317)
..+++|+=+|+ |.+|..++ ..|+ +|+++|.++..+ +.+++. .|.. +.+...+..++....
T Consensus 166 l~g~~V~ViG~--G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l-~~~~~~---~g~~--~~~~~~~~~~l~~~l------- 229 (377)
T 2vhw_A 166 VEPADVVVIGA--GTAGYNAARIANGMGA-TVTVLDINIDKL-RQLDAE---FCGR--IHTRYSSAYELEGAV------- 229 (377)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHH---TTTS--SEEEECCHHHHHHHH-------
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEeCCHHHH-HHHHHh---cCCe--eEeccCCHHHHHHHH-------
Confidence 46889999987 66766533 3577 799999999887 666532 3432 222222222222222
Q ss_pred CCccEEEECC--CCCC--cc-HHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 230 GPFDYMSVTP--PYTA--VD-YEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 230 ~~fDlV~~dP--Py~~--~~-~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...|+|+... |... .. ..+.+ ..++++|+|+-..
T Consensus 230 ~~aDvVi~~~~~p~~~t~~li~~~~l------~~mk~g~~iV~va 268 (377)
T 2vhw_A 230 KRADLVIGAVLVPGAKAPKLVSNSLV------AHMKPGAVLVDIA 268 (377)
T ss_dssp HHCSEEEECCCCTTSCCCCCBCHHHH------TTSCTTCEEEEGG
T ss_pred cCCCEEEECCCcCCCCCcceecHHHH------hcCCCCcEEEEEe
Confidence 3579999854 3210 01 12222 2578999876543
No 485
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=67.36 E-value=54 Score=28.60 Aligned_cols=82 Identities=20% Similarity=0.144 Sum_probs=49.5
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhH-HHhCCCCceEEEEecHHHHHH--H-Hhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNL-EWTGFLDVSSIHTVRVETFLE--R-AEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~-~~~gl~~~v~ii~gD~~~~l~--~-~~~~ 225 (317)
..++++|=.|++ |.+|.+ +++.|+ +|++++.++..+ +.+.+.+ +..+ .++.++.+|+.+... . ....
T Consensus 19 l~~k~~lVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 19 LRGRVALVTGGS-RGLGFGIAQGLAEAGC-SVVVASRNLEEA-SEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHH
Confidence 457788888754 555544 345676 699999999887 6555554 3334 247788888754321 1 1000
Q ss_pred cCCCCCccEEEECCC
Q 021116 226 VGKDGPFDYMSVTPP 240 (317)
Q Consensus 226 ~~~~~~fDlV~~dPP 240 (317)
...-+..|++|.+.-
T Consensus 94 ~~~~g~iD~lvnnAg 108 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAG 108 (267)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 001146899998753
No 486
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=67.35 E-value=16 Score=32.43 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=48.6
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=.|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.++..+ ++.++.+|+.+... . ..+..
T Consensus 27 l~~k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~-~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 27 LAGRIALVTGGS-RGIGQMIAQGLLEAGA-RVFICARDAEAC-ADTATRLSAYG---DCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHH
Confidence 357788888764 455544 445676 699999999877 65555554332 47788888754321 1 11000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
...+..|++|.+.
T Consensus 101 ~~~g~iD~lvnnA 113 (276)
T 2b4q_A 101 ELSARLDILVNNA 113 (276)
T ss_dssp HHCSCCSEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 1124789999875
No 487
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=67.33 E-value=28 Score=30.83 Aligned_cols=82 Identities=12% Similarity=-0.014 Sum_probs=48.4
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.++.+++.+ +.+.+.+...+- ..+.++.+|+.+... . .....
T Consensus 31 l~gk~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 31 GEGRIALVTGGG-TGVGRGIAQALSAEGY-SVVITGRRPDVL-DAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp ---CEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-CHHHHHHHHHHHHCCC-EEEEEECCHHHH-HHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 357788877755 455543 445676 699999999887 666666554432 235788888754321 0 10000
Q ss_pred CCCCCccEEEECC
Q 021116 227 GKDGPFDYMSVTP 239 (317)
Q Consensus 227 ~~~~~fDlV~~dP 239 (317)
..-+..|++|.+.
T Consensus 107 ~~~g~iD~lvnnA 119 (281)
T 4dry_A 107 AEFARLDLLVNNA 119 (281)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 0115789999875
No 488
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=67.19 E-value=9.1 Score=34.20 Aligned_cols=106 Identities=20% Similarity=0.119 Sum_probs=56.2
Q ss_pred CCeEEEECCCcchHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHH-HhhhcCCCCCccE
Q 021116 156 PGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLER-AEQFVGKDGPFDY 234 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~-~~~~~~~~~~fDl 234 (317)
.-+++|||||.|. |+ .+.|.. + +.|. .+ ..++.+|+.++... ... -+.+|+
T Consensus 33 ~~~vidLFaGig~-Gl--~~aGf~-~--------------~~N~-----~~-~~~~~~DI~~i~~~~i~~----~~~~Dl 84 (230)
T 2qrv_B 33 PVRVLSLFEDIKK-EL--TSLGFL-E--------------SGSD-----PG-QLKHVVDVTDTVRKDVEE----WGPFDL 84 (230)
T ss_dssp CCCEEEESSCCTT-TT--TTTTSC-C------------------------C-CEEEESCCTTCCHHHHHH----TCCCSE
T ss_pred CceEEEeccChhH-HH--HHCCCc-h--------------hhcC-----CC-CcEecCChhhCCHhHhcc----cCCCCE
Confidence 4589999999886 33 234543 2 1221 12 23567887765321 110 147999
Q ss_pred EEECCCCCCc--------cHHHHHHHHHHcCCcCCCe------EEEEEeCCCCC------cc-ccCCCeEEEEEeecCc
Q 021116 235 MSVTPPYTAV--------DYEVLMAQISKSALVGKDS------FIVVEYPLRTD------ML-DTCGCLVKIKDRRFGR 292 (317)
Q Consensus 235 V~~dPPy~~~--------~~~~~l~~L~~~~lLkpgG------~ivv~~~~~~~------l~-~~~~~~~~~~~r~yG~ 292 (317)
|+-.||.... .+-+.++.+. .++|.. ++++|....-. +. .....+.+++...||-
T Consensus 85 liGG~PCQ~FS~ag~rg~Lf~ef~Riv~---~~rPk~~~~~P~~fv~ENV~gL~~~~~~~i~~~l~~~~~vLnA~dfgv 160 (230)
T 2qrv_B 85 VYGATPPLGHTCDRPPSWYLFQFHRLLQ---YARPKPGSPRPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGS 160 (230)
T ss_dssp EEEECCCTTTSSCSCTHHHHHHHHHHHH---HHCCCSSCCSCCEEEEEECSCSCHHHHHHHHHHHTSCCEECCCCCSCC
T ss_pred EEECCCCCcccccCCCchHHHHHHHHHH---HHCcCcccCCCcEEEEeccHHhhhccHHHHHHHHcCCcEEEEcccCCc
Confidence 9999997531 2344455544 356653 67777654321 00 0112445566667774
No 489
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=67.14 E-value=37 Score=30.01 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=48.1
Q ss_pred CCCCeEEEECCCcchHHH----HHHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGI----EAISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~I----eaas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++.| +|. .+++.|+ +|+.+|.+++.+ +.+.+.+ + .++.++.+|+.+... . .....
T Consensus 27 l~gk~vlVTGas~g-IG~aia~~la~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 27 LAGKVAIVTGAGAG-IGLAVARRLADEGC-HVLCADIDGDAA-DAAATKI---G--CGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp CTTCEEEETTTTST-HHHHHHHHHHHTTC-EEEEEESSHHHH-HHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHH
Confidence 45778888776554 443 3456776 799999999887 5554433 3 347788888754321 0 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|++|.+.-
T Consensus 99 ~~~g~iD~lvnnAg 112 (277)
T 3gvc_A 99 AAFGGVDKLVANAG 112 (277)
T ss_dssp HHHSSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 01157899998753
No 490
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=66.95 E-value=20 Score=30.38 Aligned_cols=75 Identities=9% Similarity=-0.016 Sum_probs=43.8
Q ss_pred eEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCcc
Q 021116 158 RWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFD 233 (317)
Q Consensus 158 rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fD 233 (317)
++|=.|++ |.+|.+ +++.|+ +|+.++.++..+ +.+.+.+ ..++.++..|+.+...-...+..-...+|
T Consensus 3 ~vlVTGas-~gIG~~~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d 74 (230)
T 3guy_A 3 LIVITGAS-SGLGAELAKLYDAEGK-ATYLTGRSESKL-STVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPS 74 (230)
T ss_dssp CEEEESTT-SHHHHHHHHHHHHTTC-CEEEEESCHHHH-HHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred EEEEecCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence 35555654 455543 456776 599999999887 5554433 23477888887654211110111234569
Q ss_pred EEEECCC
Q 021116 234 YMSVTPP 240 (317)
Q Consensus 234 lV~~dPP 240 (317)
+++.+.-
T Consensus 75 ~lv~~Ag 81 (230)
T 3guy_A 75 TVVHSAG 81 (230)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998753
No 491
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=66.90 E-value=27 Score=33.79 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=50.8
Q ss_pred eEEEECCCcchHHHHH----HHcCCCEEEEEeCCHHHHHHHHHHhHHHh---CC---------CCceEEEEecHHHHHHH
Q 021116 158 RWLDLYSGTGSVGIEA----ISRGCSEVHFVEMDPWVVSNVLIPNLEWT---GF---------LDVSSIHTVRVETFLER 221 (317)
Q Consensus 158 rVLDlgcGtG~l~Iea----as~Ga~~V~aVDin~~al~~~ar~N~~~~---gl---------~~~v~ii~gD~~~~l~~ 221 (317)
+|.=+ |.|.+|... ++.|. +|+++|.+++.+ +.+++..... ++ ..++++ ..|..+.+
T Consensus 4 kI~VI--G~G~vG~~lA~~La~~G~-~V~~~D~~~~~v-~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~-- 76 (450)
T 3gg2_A 4 DIAVV--GIGYVGLVSATCFAELGA-NVRCIDTDRNKI-EQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV-- 76 (450)
T ss_dssp EEEEE--CCSHHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG--
T ss_pred EEEEE--CcCHHHHHHHHHHHhcCC-EEEEEECCHHHH-HHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH--
Confidence 44445 556666543 34565 799999999987 6655421000 00 122332 34544432
Q ss_pred HhhhcCCCCCccEEEECCCCCC-----c---cHHHHHHHHHHcCCcCCCeEEEEEe
Q 021116 222 AEQFVGKDGPFDYMSVTPPYTA-----V---DYEVLMAQISKSALVGKDSFIVVEY 269 (317)
Q Consensus 222 ~~~~~~~~~~fDlV~~dPPy~~-----~---~~~~~l~~L~~~~lLkpgG~ivv~~ 269 (317)
...|+||+.-|-.. . ..+..++.+.. .++++.+++...
T Consensus 77 --------~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~--~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 --------PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGR--AMSRYILIVTKS 122 (450)
T ss_dssp --------GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHH--HCCSCEEEEECS
T ss_pred --------hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHh--hCCCCCEEEEee
Confidence 35799998654321 1 24555565553 567766665443
No 492
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=66.74 E-value=8.8 Score=35.33 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=40.3
Q ss_pred CCCCeEEEECCC-cchHHHH-HHHcCCCEEEEEeCCH------------------HHHHHHHHHhHHHhCCCCceEEEEe
Q 021116 154 LRPGRWLDLYSG-TGSVGIE-AISRGCSEVHFVEMDP------------------WVVSNVLIPNLEWTGFLDVSSIHTV 213 (317)
Q Consensus 154 ~~~~rVLDlgcG-tG~l~Ie-aas~Ga~~V~aVDin~------------------~al~~~ar~N~~~~gl~~~v~ii~g 213 (317)
+++.+||=+||| .|+-.+. ++..|..+++.+|.|. .-+ +.+++.++..+-.-+++.+..
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka-~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKV-QAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHH-HHHHHHHHHHCTTSEEEEECC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHH-HHHHHHHHhhCCCcEEEEecc
Confidence 457899999887 4444433 4456889999999875 333 567777776654434555554
Q ss_pred cH
Q 021116 214 RV 215 (317)
Q Consensus 214 D~ 215 (317)
++
T Consensus 113 ~l 114 (292)
T 3h8v_A 113 NI 114 (292)
T ss_dssp CT
T ss_pred cC
Confidence 44
No 493
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=66.69 E-value=43 Score=29.34 Aligned_cols=83 Identities=11% Similarity=-0.000 Sum_probs=49.8
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCC-CCceEEEEecHHHHHH--H-Hhhh
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGF-LDVSSIHTVRVETFLE--R-AEQF 225 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl-~~~v~ii~gD~~~~l~--~-~~~~ 225 (317)
..++++|=.|++ |.+|.+ +++.|+ +|++++.+++.+ +.+.+.++..+. ..++.++.+|+.+... . ....
T Consensus 4 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 4 FSNKTVIITGSS-NGIGRTTAILFAQEGA-NVTITGRSSERL-EETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TTTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 356777777754 455544 445676 699999999887 666665554332 1157889998764321 1 1000
Q ss_pred cCCCCCccEEEECC
Q 021116 226 VGKDGPFDYMSVTP 239 (317)
Q Consensus 226 ~~~~~~fDlV~~dP 239 (317)
...-+..|++|.+.
T Consensus 81 ~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 81 LKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 00114689999875
No 494
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=66.50 E-value=50 Score=26.64 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=51.4
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcCC
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSAL 258 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~l 258 (317)
.+|..||-++... +..+.-++..|+. + ....|..+.+..+. ...||+|++|--....+--++++.+.+
T Consensus 8 ~~iLivdd~~~~~-~~l~~~L~~~g~~--v-~~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~l~~--- 75 (184)
T 3rqi_A 8 KNFLVIDDNEVFA-GTLARGLERRGYA--V-RQAHNKDEALKLAG-----AEKFEFITVXLHLGNDSGLSLIAPLCD--- 75 (184)
T ss_dssp CEEEEECSCHHHH-HHHHHHHHHTTCE--E-EEECSHHHHHHHHT-----TSCCSEEEECSEETTEESHHHHHHHHH---
T ss_pred CeEEEEcCCHHHH-HHHHHHHHHCCCE--E-EEeCCHHHHHHHHh-----hCCCCEEEEeccCCCccHHHHHHHHHh---
Confidence 4799999999997 8888888887762 4 44567777766553 467999999942212233456666653
Q ss_pred cCCCeEEEEEeC
Q 021116 259 VGKDSFIVVEYP 270 (317)
Q Consensus 259 LkpgG~ivv~~~ 270 (317)
..++.-+++-..
T Consensus 76 ~~~~~~ii~lt~ 87 (184)
T 3rqi_A 76 LQPDARILVLTG 87 (184)
T ss_dssp HCTTCEEEEEES
T ss_pred cCCCCCEEEEeC
Confidence 234444444333
No 495
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=66.42 E-value=35 Score=29.40 Aligned_cols=79 Identities=11% Similarity=0.104 Sum_probs=47.9
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH--H-Hhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE--R-AEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~--~-~~~~~ 226 (317)
..++++|=-|++.| +|.+ +++.|+ +|+.++.+++.+ +.+.+.+ + .++.++.+|+.+... . .....
T Consensus 4 l~gk~vlVTGas~g-IG~a~a~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 4 LAGKTALVTGAAQG-IGKAIAARLAADGA-TVIVSDINAEGA-KAAAASI---G--KKARAIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHHHH---C--TTEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHh---C--CceEEEEcCCCCHHHHHHHHHHHH
Confidence 46788888886544 4443 456776 699999999887 5544333 3 347788888754321 1 10000
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|++|.+.-
T Consensus 76 ~~~g~id~lv~nAg 89 (247)
T 3rwb_A 76 ALTGGIDILVNNAS 89 (247)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHCCCCCEEEECCC
Confidence 01147899998753
No 496
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=66.02 E-value=33 Score=29.74 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=48.3
Q ss_pred CCCCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHH---HHhhhc
Q 021116 154 LRPGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLE---RAEQFV 226 (317)
Q Consensus 154 ~~~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~---~~~~~~ 226 (317)
..++++|=-|++ |.+|.+ +++.|+ +|+.+|.+.+.+ +.+.+.+ + .++.++.+|+.+... ......
T Consensus 6 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~---~--~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 6 LEGKSALITGSA-RGIGRAFAEAYVREGA-TVAIADIDIERA-RQAAAEI---G--PAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHH-HHHHHHH---C--TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHH-HHHHHHh---C--CCceEEEeeCCCHHHHHHHHHHHH
Confidence 457888888855 455543 456676 699999999876 5444333 2 347888888754321 111011
Q ss_pred CCCCCccEEEECCC
Q 021116 227 GKDGPFDYMSVTPP 240 (317)
Q Consensus 227 ~~~~~fDlV~~dPP 240 (317)
..-+..|++|.+.-
T Consensus 78 ~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 78 EHAGGLDILVNNAA 91 (259)
T ss_dssp HHSSSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998754
No 497
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=65.94 E-value=40 Score=25.37 Aligned_cols=74 Identities=12% Similarity=0.025 Sum_probs=46.5
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCC---C--CCccEEEECCCCCCccHHHHHHHH
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGK---D--GPFDYMSVTPPYTAVDYEVLMAQI 253 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~---~--~~fDlV~~dPPy~~~~~~~~l~~L 253 (317)
.+|..||-++... +..+.-++..|....+ ....+..+.+..+...... . ..+|+|++|.-....+..++++.+
T Consensus 7 ~~iLivdd~~~~~-~~l~~~L~~~g~~~~v-~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l 84 (149)
T 1k66_A 7 QPLLVVEDSDEDF-STFQRLLQREGVVNPI-YRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEI 84 (149)
T ss_dssp SCEEEECCCHHHH-HHHHHHHHHTTBCSCE-EEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHH
T ss_pred ccEEEEECCHHHH-HHHHHHHHHcCCCceE-EEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHH
Confidence 3699999999997 8888888888763223 3445666666554310000 0 579999999533222445566666
Q ss_pred H
Q 021116 254 S 254 (317)
Q Consensus 254 ~ 254 (317)
.
T Consensus 85 ~ 85 (149)
T 1k66_A 85 K 85 (149)
T ss_dssp T
T ss_pred H
Confidence 4
No 498
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=65.71 E-value=22 Score=34.70 Aligned_cols=95 Identities=16% Similarity=0.086 Sum_probs=51.4
Q ss_pred CCeEEEECCCcchHHHH----HHHcCCCEEEEEeCCHHHHHHHHHHhHHHh---CC---------CCceEEEEecHHHHH
Q 021116 156 PGRWLDLYSGTGSVGIE----AISRGCSEVHFVEMDPWVVSNVLIPNLEWT---GF---------LDVSSIHTVRVETFL 219 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ie----aas~Ga~~V~aVDin~~al~~~ar~N~~~~---gl---------~~~v~ii~gD~~~~l 219 (317)
..+|.=+|+| .+|.. +++.|. +|+++|++++.+ +.++++.... |+ ..++++ ..|..+.+
T Consensus 8 ~~~I~VIG~G--~vG~~lA~~la~~G~-~V~~~d~~~~~v-~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 8 SMNLTIIGSG--SVGLVTGACLADIGH-DVFCLDVDQAKI-DILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHHHH-HHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CceEEEECcC--HHHHHHHHHHHhCCC-EEEEEECCHHHH-HHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 4567667555 45443 344565 699999999988 7665531000 10 012332 34544333
Q ss_pred HHHhhhcCCCCCccEEEECCCCC-----C---ccHHHHHHHHHHcCCcCCCeEEEE
Q 021116 220 ERAEQFVGKDGPFDYMSVTPPYT-----A---VDYEVLMAQISKSALVGKDSFIVV 267 (317)
Q Consensus 220 ~~~~~~~~~~~~fDlV~~dPPy~-----~---~~~~~~l~~L~~~~lLkpgG~ivv 267 (317)
...|+||+.-|-. . ...+..++.+.. .++++.+++.
T Consensus 83 ----------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~--~l~~~~iVV~ 126 (478)
T 2y0c_A 83 ----------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGR--YMTGFKVIVD 126 (478)
T ss_dssp ----------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHH--HCCSCEEEEE
T ss_pred ----------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHH--hcCCCCEEEE
Confidence 2469999864421 1 124555555543 5777776644
No 499
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=65.46 E-value=22 Score=34.09 Aligned_cols=43 Identities=23% Similarity=0.350 Sum_probs=30.3
Q ss_pred CCeEEEECCCcchHHHHHHHc--------CCCEEEEEeCCHHHHHHHHHHhH
Q 021116 156 PGRWLDLYSGTGSVGIEAISR--------GCSEVHFVEMDPWVVSNVLIPNL 199 (317)
Q Consensus 156 ~~rVLDlgcGtG~l~Ieaas~--------Ga~~V~aVDin~~al~~~ar~N~ 199 (317)
.-.++|+|+|+|.++.-++.. ...+++.||+|+... +.=++++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr-~~Q~~~L 131 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR-QKQQTLL 131 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH-HHHHHHS
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH-HHHHHHh
Confidence 357999999999998765431 123799999999775 4333333
No 500
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=65.29 E-value=41 Score=25.27 Aligned_cols=90 Identities=7% Similarity=0.010 Sum_probs=51.3
Q ss_pred CEEEEEeCCHHHHHHHHHHhHHHhCCCCceEEEEecHHHHHHHHhhhcCCCCCccEEEECCCCCCccHHHHHHHHHHcC-
Q 021116 179 SEVHFVEMDPWVVSNVLIPNLEWTGFLDVSSIHTVRVETFLERAEQFVGKDGPFDYMSVTPPYTAVDYEVLMAQISKSA- 257 (317)
Q Consensus 179 ~~V~aVDin~~al~~~ar~N~~~~gl~~~v~ii~gD~~~~l~~~~~~~~~~~~fDlV~~dPPy~~~~~~~~l~~L~~~~- 257 (317)
.+|..||-++... +..+.-++..|....+ ....+..+.+..+.........+|+||+|--....+-.++++.+.+..
T Consensus 10 ~~iLivdd~~~~~-~~l~~~l~~~~~~~~v-~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 87 (146)
T 3ilh_A 10 DSVLLIDDDDIVN-FLNTTIIRMTHRVEEI-QSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQ 87 (146)
T ss_dssp EEEEEECSCHHHH-HHHHHHHHTTCCEEEE-EEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCG
T ss_pred ceEEEEeCCHHHH-HHHHHHHHhcCCCeee-eecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhh
Confidence 3699999999887 7888777776652112 234566666554431111125799999985332234456666665311
Q ss_pred CcCCCeEEEEEeC
Q 021116 258 LVGKDSFIVVEYP 270 (317)
Q Consensus 258 lLkpgG~ivv~~~ 270 (317)
...+...+++...
T Consensus 88 ~~~~~~~ii~~t~ 100 (146)
T 3ilh_A 88 PMKNKSIVCLLSS 100 (146)
T ss_dssp GGTTTCEEEEECS
T ss_pred hccCCCeEEEEeC
Confidence 0234444444443
Done!