Your job contains 1 sequence.
>021121
MPVFKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA
DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD
SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR
EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR
KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG
WDELVYVWQQGMDPRAV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021121
(317 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 1514 2.7e-155 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 873 2.3e-87 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 723 1.8e-71 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 710 4.3e-70 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 701 3.8e-69 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 700 4.9e-69 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 698 8.0e-69 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 698 8.0e-69 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 693 2.7e-68 1
ASPGD|ASPL0000053437 - symbol:pexG species:162425 "Emeric... 412 1.5e-66 3
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 670 7.4e-66 1
SGD|S000002549 - symbol:PEX7 "Peroxisomal signal receptor... 308 4.2e-54 3
POMBASE|SPAC17D4.01 - symbol:pex7 "peroxin-7 (predicted)"... 456 3.5e-43 1
CGD|CAL0000686 - symbol:PEX7 species:5476 "Candida albica... 371 8.2e-37 2
UNIPROTKB|Q59WW3 - symbol:PEX7 "Potential intraperoxisoma... 371 8.2e-37 2
UNIPROTKB|O59894 - symbol:PEX7 "Peroxisomal targeting sig... 305 5.7e-36 2
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 376 1.1e-34 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 265 1.0e-22 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 265 1.0e-22 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 257 8.7e-22 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 251 1.9e-21 1
FB|FBgn0027518 - symbol:CG7609 species:7227 "Drosophila m... 253 1.5e-20 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 248 1.6e-20 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 246 1.7e-20 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 246 1.8e-20 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 239 4.6e-20 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 242 7.4e-20 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 251 8.6e-20 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 236 8.9e-20 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 243 9.7e-20 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 240 1.0e-19 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 240 1.2e-19 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 240 1.3e-19 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 239 1.6e-19 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 237 1.8e-19 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 237 1.8e-19 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 237 1.8e-19 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 246 1.9e-19 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 235 2.0e-19 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 232 2.3e-19 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 235 2.9e-19 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 235 2.9e-19 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 235 2.9e-19 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 235 2.9e-19 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 235 2.9e-19 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 235 2.9e-19 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 235 2.9e-19 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 235 2.9e-19 1
UNIPROTKB|F1MJS7 - symbol:WDR24 "Uncharacterized protein"... 239 4.9e-19 1
UNIPROTKB|F1RG37 - symbol:WDR24 "Uncharacterized protein"... 238 6.2e-19 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 233 7.3e-19 1
MGI|MGI:2446285 - symbol:Wdr24 "WD repeat domain 24" spec... 237 8.0e-19 1
UNIPROTKB|G3V8L0 - symbol:Wdr24 "RCG32838" species:10116 ... 237 8.0e-19 1
ZFIN|ZDB-GENE-040426-2012 - symbol:wdr24 "WD repeat domai... 236 1.0e-18 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 231 2.5e-18 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 231 2.9e-18 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 230 5.5e-18 1
DICTYBASE|DDB_G0287817 - symbol:wdr24 "WD40 repeat-contai... 232 8.2e-18 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 227 1.2e-17 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 227 1.2e-17 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 229 1.7e-17 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 227 1.9e-17 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 227 1.9e-17 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 227 2.1e-17 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 227 2.1e-17 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 227 2.1e-17 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 227 2.1e-17 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 227 2.1e-17 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 227 2.1e-17 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 227 2.1e-17 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 230 2.3e-17 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 227 2.8e-17 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 227 2.8e-17 1
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 229 3.5e-17 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 229 3.5e-17 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 229 3.5e-17 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 229 3.5e-17 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 224 6.3e-17 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 223 8.8e-17 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 221 1.5e-16 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 221 1.9e-16 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 217 2.1e-16 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 218 2.6e-16 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 223 2.7e-16 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 218 2.7e-16 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 219 3.0e-16 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 216 3.0e-16 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 219 3.2e-16 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 218 4.1e-16 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 222 5.1e-16 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 214 5.1e-16 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 217 6.4e-16 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 218 7.2e-16 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 216 9.0e-16 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 216 9.0e-16 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 217 1.0e-15 1
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 214 1.4e-15 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 196 1.9e-15 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 213 2.2e-15 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 212 2.8e-15 1
WARNING: Descriptions of 1239 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 1514 (538.0 bits), Expect = 2.7e-155, P = 2.7e-155
Identities = 266/316 (84%), Positives = 296/316 (93%)
Query: 1 MPVFKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA 60
MPVFK PFNGYSVKFSPFYESRLAVATAQNFGILGNGR+HVL+L+P AP +TE V++DTA
Sbjct: 1 MPVFKAPFNGYSVKFSPFYESRLAVATAQNFGILGNGRIHVLELAPGAPGVTESVSYDTA 60
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D VYD+ WSESHDS+LIAA+ DGSVKIYDTALPP +NPIRS EH REV S DYNPTRRD
Sbjct: 61 DAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRD 120
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
SF+TSSWDDTVKLW +DRP SVRTFKEHAYCVY A WNP+H DVF SASGDCTLRIWDVR
Sbjct: 121 SFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVR 180
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
E GSTMIIPAH+FEIL+CDWNKYDDC++A++SVDK++K+WDVR+YRVP+AVLNGHGYAVR
Sbjct: 181 EPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVR 240
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
KVKFSPHRR+L+ASCSYDM+VCLWD+MVEDALVGRYDHHTEFAVG+DMSVLVEGL+ASTG
Sbjct: 241 KVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTG 300
Query: 301 WDELVYVWQQGMDPRA 316
WDELVYVWQQGMDPRA
Sbjct: 301 WDELVYVWQQGMDPRA 316
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 156/312 (50%), Positives = 215/312 (68%)
Query: 1 MPVFKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA 60
M F + FNGYSV+FSPF E RLA T+Q+FGI+GNGR ++LD+ + FDT
Sbjct: 1 MKRFHSHFNGYSVEFSPFEEQRLACVTSQHFGIIGNGRQYILDVLDRD--IGAFKTFDTR 58
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
DG+YD WSE ++ + ++ DGS+KI+DT P PI+S EHT+EV+S D+N +D
Sbjct: 59 DGLYDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKD 118
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+FIT SWD ++K+W S++TF+EH YC+Y+A W+PR++ +F S SGD TL+IWD R
Sbjct: 119 TFITGSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR 178
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
+ S I AH+ EIL CDWNKY+D + + SVDK+I+IWD+R P +L GH YAVR
Sbjct: 179 DNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVR 238
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVE-DALVGRYDHHTEFAVGVDMSVLVEGLLAST 299
++K SPH ++LASCSYDM+V +WD E D ++ R DHHTEF VG+D ++ ++G +AS
Sbjct: 239 RIKCSPHSESMLASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQMASC 298
Query: 300 GWDELVYVWQQG 311
WDE V VW G
Sbjct: 299 SWDEQVCVWNLG 310
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 55/196 (28%), Positives = 93/196 (47%)
Query: 124 TSSWDDTVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+SS D ++K+W P+ +++F+EH VY+ WN D F + S D +++IW+ R
Sbjct: 76 SSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPR 135
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
S H + I + W+ + L AS S D+++KIWD R+ R + + H + +
Sbjct: 136 MDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNR-SLNTIKAHDHEIL 194
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
++ + + + S D T+ +WD D HT + S E +LAS
Sbjct: 195 TCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCS 254
Query: 301 WDELVYVWQQG--MDP 314
+D V VW + DP
Sbjct: 255 YDMSVIVWDRAREQDP 270
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 139/301 (46%), Positives = 196/301 (65%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+ +FSP++ R+A A AQ +GI G G + VL+ + L L +FD DG++D+ W
Sbjct: 16 HGYAAEFSPYWPGRVACAAAQYYGIAGCGTLAVLEQNETGIVL--LRSFDWNDGLFDVTW 73
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE+++ +LI + DGS++I+D A P P++ EHT+E +S D++ TR + + S SW
Sbjct: 74 SENNEHVLITSSGDGSLQIWDIAKPK--GPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSW 131
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D T KLW S+RTFK H +Y+ W+P F SASGD TLRIWDV+ G ++
Sbjct: 132 DQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLV 191
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
IPAH+ EIL+CDW KYD+ L+ + +VD S+K WD+RN R P+ +L GH YAVR+VKFSP
Sbjct: 192 IPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPF 251
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
LLASCSYD TV WDF + L+ +HHTEF G+D+S+ G + WDELV +
Sbjct: 252 HATLLASCSYDFTVRFWDFSKPNPLLETVEHHTEFTCGLDLSLHKCGQVVDCAWDELVKI 311
Query: 308 W 308
+
Sbjct: 312 Y 312
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 136/308 (44%), Positives = 199/308 (64%)
Query: 3 VFKTPF-NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTAD 61
+ +TP +GY+ +FSP+ RLA ATAQ++GI G G + +LD P L +FD D
Sbjct: 11 MLRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILD--PDEAGLRLFRSFDWND 68
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G++D+ WSE+++ +LI DGS++++DTA A P++ EH +EV+S D++ TR +
Sbjct: 69 GLFDVTWSENNEHVLITCSGDGSLQLWDTA--KAAGPLQVYKEHAQEVYSVDWSQTRGEQ 126
Query: 122 FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+ S SWD TVKLW S+ TF+ H +Y+ W+P F SASGD TLRIWDV+
Sbjct: 127 LVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 186
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
G ++IPAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN R P+ L GH YA+R
Sbjct: 187 AAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIR 246
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+VKFSP ++LASCSYD TV W+F D+L+ +HHTEF G+D S+ +A
Sbjct: 247 RVKFSPFHASVLASCSYDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCS 306
Query: 301 WDELVYVW 308
WDE + ++
Sbjct: 307 WDETIKIY 314
Score = 204 (76.9 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 54/234 (23%), Positives = 111/234 (47%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGSVKIYDTALP 93
G+G + + D + AA L V + A VY + WS++ + L+++ D +VK++D P
Sbjct: 88 GDGSLQLWDTAKAAGPLQ--VYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD---P 142
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-TFKEHAYCV 152
+ + H ++S ++P F ++S D T+++W V + VR H +
Sbjct: 143 TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-KAAGVRIVIPAHQAEI 201
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASA 211
+ W + ++ + + DC+LR WD+R + + + H + I ++ + ++AS
Sbjct: 202 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 261
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D +++ W+ + + H + FS +A CS+D T+ ++D
Sbjct: 262 SYDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRS-LHEHTREVHSADYNPTRRDS 121
+Y WS +A D +++I+D A +R + H E+ S D+ +
Sbjct: 158 IYSTIWSPHIPGCFASASGDQTLRIWDVK----AAGVRIVIPAHQAEILSCDWCKYNENL 213
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+T + D +++ W + R F+ H Y + ++P H+ V S S D T+R W+
Sbjct: 214 LVTGAVDCSLRGWDL-RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNF 272
Query: 180 REMGSTMIIPAHEFEILA-CDWNKYDDCLIASASVDKSIKIWDVRNYRVP 228
+ S + H E D++ +A S D++IKI+D +P
Sbjct: 273 SKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPACLTIP 322
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 133/301 (44%), Positives = 196/301 (65%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+V+FSP+ RLA A AQ++GI G G + VLD + + L +FD DG++D+ W
Sbjct: 13 HGYAVEFSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESG--LQIFRSFDWNDGLFDVTW 70
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE+++ +L+ DGS++++DTA P++ EHT+EV+S D++ TR + + S SW
Sbjct: 71 SENNEHVLVTCSGDGSLQLWDTA--KATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSW 128
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D TVK+W S+ TF+ H +Y+ W+P F SASGD TLRIWDV+ G ++
Sbjct: 129 DQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV 188
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
IPAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN R P+ L GH YA+R+VKFSP
Sbjct: 189 IPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPF 248
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
++LASCSYD TV W+F D L+ +HHTEF G+D+S+ +A WDE V +
Sbjct: 249 HASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKI 308
Query: 308 W 308
+
Sbjct: 309 Y 309
Score = 202 (76.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 54/234 (23%), Positives = 110/234 (47%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVA-DGSVKIYDTALP 93
G+G + + D + A L V + VY + WS++ D L+ + + D +VK++D P
Sbjct: 83 GDGSLQLWDTAKATGPLQ--VYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWD---P 137
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-TFKEHAYCV 152
N + + H ++S ++P F ++S D T+++W V + T VR H +
Sbjct: 138 TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-KTTGVRIVIPAHQAEI 196
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASA 211
+ W + ++ + + DC+LR WD+R + + + H + I ++ + ++AS
Sbjct: 197 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 256
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D +++ W+ + + H + S +A CS+D TV +++
Sbjct: 257 SYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETVKIYN 310
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 130/301 (43%), Positives = 195/301 (64%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+ +FSP+ RLA A AQ++GI G G + +LD + + L +FD DG++D+ W
Sbjct: 18 HGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLILDQNESGLRLFR--SFDWNDGLFDVTW 75
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE+++ +L+ DGS++++DTA P++ EHT+EV+S D++ TR + + S SW
Sbjct: 76 SENNEHILVTCSGDGSLQLWDTA--KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSW 133
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D TVKLW S+ TF+ H +Y+ W+P F SASGD TLRIWDV+ G ++
Sbjct: 134 DQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRIV 193
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
+PAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN R P+ L GH YA+R+VKFSP
Sbjct: 194 VPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPF 253
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
++LASCSYD TV W+F D L+ +HHTEF G+D+S+ +A WDE + +
Sbjct: 254 HASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKI 313
Query: 308 W 308
+
Sbjct: 314 Y 314
Score = 192 (72.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 51/234 (21%), Positives = 109/234 (46%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGSVKIYDTALP 93
G+G + + D + A L V + VY + WS++ + L+++ D +VK++D P
Sbjct: 88 GDGSLQLWDTAKATGPLQ--VYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD---P 142
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-TFKEHAYCV 152
+ + H ++S ++P F ++S D T+++W V + T VR H +
Sbjct: 143 TVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-KSTGVRIVVPAHQAEI 201
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASA 211
+ W + ++ + + DC+LR WD+R + + + H + I ++ + ++AS
Sbjct: 202 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 261
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D +++ W+ + + H + S +A C++D T+ ++D
Sbjct: 262 SYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 131/301 (43%), Positives = 195/301 (64%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+ +FSP+ RLA A AQ++GI G G + VLD + + L +FD DG++D+ W
Sbjct: 13 HGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESG--LQIFRSFDWNDGLFDVTW 70
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE+++ +L+ DGS++++DTA P++ EHT+EV+S D++ TR + + S SW
Sbjct: 71 SENNEHVLVTCSGDGSLQLWDTA--KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSW 128
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D TVK+W S+ TF+ H +Y+ W+P F SASGD TLRIWDV+ G ++
Sbjct: 129 DQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV 188
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
IPAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN R P+ L GH YA+R+VKFSP
Sbjct: 189 IPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPF 248
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
++LASCSYD TV W+F D L+ +HHTEF G+D+S+ +A WDE + +
Sbjct: 249 HASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKI 308
Query: 308 W 308
+
Sbjct: 309 Y 309
Score = 202 (76.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 53/234 (22%), Positives = 110/234 (47%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGSVKIYDTALP 93
G+G + + D + A L V + VY + WS++ + L+++ D +VK++D P
Sbjct: 83 GDGSLQLWDTAKATGPLQ--VYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD---P 137
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-TFKEHAYCV 152
N + + H ++S ++P F ++S D T+++W V + T VR H +
Sbjct: 138 TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-KTTGVRIVIPAHQTEI 196
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASA 211
+ W + ++ + + DC+LR WD+R + + + H + I ++ + ++AS
Sbjct: 197 LSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 256
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D +++ W+ + + H + S +A CS+D T+ ++D
Sbjct: 257 SYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 310
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/169 (23%), Positives = 70/169 (41%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
+Y WS +A D +++I+D T + H E+ S D+ +
Sbjct: 153 IYSTIWSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLV 209
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+T + D +++ W + R F+ H Y + ++P H+ V S S D T+R W+
Sbjct: 210 VTGAVDCSLRGWDL-RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS 268
Query: 181 EMGSTMIIPAHEFEILA-CDWNKYDDCLIASASVDKSIKIWDVRNYRVP 228
+ + H E D + +A S D++IKI+D VP
Sbjct: 269 KPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYDPVCLTVP 317
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 130/301 (43%), Positives = 195/301 (64%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+ +FSP+ RLA A AQ++GI G G + +LD + + L +FD +DG++D+ W
Sbjct: 13 HGYAAEFSPYLPGRLACAAAQHYGIAGCGTLIILDQNQSG--LQIFRSFDWSDGLFDVTW 70
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE ++ +L+ DGS++++DTA P++ EHT+EV+S D++ TR + + S SW
Sbjct: 71 SEDNEHVLVTCSGDGSLQLWDTA--KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSW 128
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D TVK+W S+ TF+ H +Y+ W+P F SASGD TLRIWDV+ G ++
Sbjct: 129 DQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIV 188
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
IPAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN R P+ L GH YA+R+VKFSP
Sbjct: 189 IPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPF 248
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
++LASCSYD TV W+F D L+ +HHTEF G+D+S+ +A WDE + +
Sbjct: 249 HASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKI 308
Query: 308 W 308
+
Sbjct: 309 Y 309
Score = 196 (74.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 52/234 (22%), Positives = 109/234 (46%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGSVKIYDTALP 93
G+G + + D + A L V + VY + WS++ + L+++ D +VK++D P
Sbjct: 83 GDGSLQLWDTAKATGPLQ--VYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD---P 137
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-TFKEHAYCV 152
N + + H ++S ++P F ++S D T+++W V + VR H +
Sbjct: 138 TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-KTAGVRIVIPAHQTEI 196
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASA 211
+ W + ++ + + DC+LR WD+R + + + H + I ++ + ++AS
Sbjct: 197 LSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 256
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D +++ W+ + + H + S +A CS+D T+ ++D
Sbjct: 257 SYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIYD 310
Score = 130 (50.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 41/169 (24%), Positives = 71/169 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
+Y WS +A D +++I+D TA + H E+ S D+ +
Sbjct: 153 IYSTIWSPHIPGCFASASGDQTLRIWDVK---TAGVRIVIPAHQTEILSCDWCKYNENLV 209
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFK--EHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+T + D +++ W + R F+ H Y + ++P H+ V S S D T+R W+
Sbjct: 210 VTGAVDCSLRGWDL-RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS 268
Query: 181 EMGSTMIIPAHEFEILA-CDWNKYDDCLIASASVDKSIKIWDVRNYRVP 228
+ + H E D + +A S D++IKI+D VP
Sbjct: 269 KPDPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETIKIYDPVCLTVP 317
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 127/301 (42%), Positives = 196/301 (65%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+ +FSP+ RLA A +Q++GI G+G + +LD + + L +FD DG++D+ W
Sbjct: 18 HGYAAEFSPYLPGRLACAASQHYGIAGSGTLLILDQNESGLRLFR--SFDWNDGLFDVTW 75
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE+++ +L+ DGS++++DTA P++ EHT+EV+S D++ TR + + S SW
Sbjct: 76 SENNEHVLVTCSGDGSLQLWDTAR--ATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSW 133
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D TVKLW S+ TF+ H +Y+ W+P F S+SGD TLRIWDV+ G ++
Sbjct: 134 DQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIV 193
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
+PAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN + P+ L GH YA+R+VKFSP
Sbjct: 194 VPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRVKFSPF 253
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
++LASCSYD TV W+F D L+ +HHTEF G+D+S+ +A WDE + +
Sbjct: 254 HASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKI 313
Query: 308 W 308
+
Sbjct: 314 Y 314
Score = 193 (73.0 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 52/234 (22%), Positives = 109/234 (46%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESH-DSLLIAAVADGSVKIYDTALP 93
G+G + + D + A L V + VY + WS++ + L+++ D +VK++D P
Sbjct: 88 GDGSLQLWDTARATGPLQ--VFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD---P 142
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-TFKEHAYCV 152
+ + H ++S ++P F +SS D T+++W V + T VR H +
Sbjct: 143 TVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDV-KTTGVRIVVPAHQAEI 201
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASA 211
+ W + ++ + + DC+LR WD+R + + + H + I ++ + ++AS
Sbjct: 202 LSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASC 261
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D +++ W+ + + H + S +A C++D T+ ++D
Sbjct: 262 SYDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCAWDETIKIYD 315
>ASPGD|ASPL0000053437 [details] [associations]
symbol:pexG species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0016560 "protein import into peroxisome matrix, docking"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
GO:GO:0016558 EMBL:AACD01000014 HOGENOM:HOG000204332 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
OrthoDB:EOG46X2JK RefSeq:XP_658484.1 ProteinModelPortal:Q5BF00
STRING:Q5BF00 EnsemblFungi:CADANIAT00001777 GeneID:2876657
KEGG:ani:AN0880.2 Uniprot:Q5BF00
Length = 355
Score = 412 (150.1 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 80/194 (41%), Positives = 127/194 (65%)
Query: 4 FKTP-FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADG 62
F+T + GY+VK+SPF+++RLAVA++ NFG++GNGR+++L+L+P + F T D
Sbjct: 4 FRTEGYQGYAVKYSPFFDNRLAVASSANFGLVGNGRLYILELTPNG--IVPAKWFTTQDA 61
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
+YDLAWSE+++ ++ A DGS+K++D+ L PI++ EH REV S +N +D+F
Sbjct: 62 LYDLAWSEANEHQVLTATGDGSIKLFDSTLNDF--PIQNWKEHNREVFSVSWNLVAKDTF 119
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+SSWD TV++W+ RP S+ T H+ C Y+A+++P D+ S D LR++D+R
Sbjct: 120 CSSSWDGTVRIWSPQRPHSLVTLPTHS-CTYSASFSPHSPDILSCVSSDSYLRVYDLRTP 178
Query: 183 GS-----TMIIPAH 191
S T+ IP H
Sbjct: 179 ASASNHLTLQIPIH 192
Score = 183 (69.5 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 38/85 (44%), Positives = 52/85 (61%)
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRN-YRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
E L DWNKY ++A A VD++I+ +D+R + P A++ GH YAVR+V +SPH N+L
Sbjct: 214 EALTHDWNKYRPSVVAVAGVDRTIRTFDIRAPQQGPQAIMIGHDYAVRRVAWSPHLSNVL 273
Query: 253 ASCSYDMTVCLWDFMVEDALVGRYD 277
S SYDMT W +VG D
Sbjct: 274 LSASYDMTCRAWSDQSPPGVVGDTD 298
Score = 112 (44.5 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 268 VEDALVGRYDHHTEFAVGVDMSVL-VEGLLASTGWDELVYVWQQGMDPRAV 317
V A +GR + HTEF GVD + EG AS GWDE VYVW D RAV
Sbjct: 307 VMGAELGRMNRHTEFVTGVDWCLFGSEGWCASVGWDESVYVW----DVRAV 353
Score = 102 (41.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 40/139 (28%), Positives = 57/139 (41%)
Query: 45 SPAAPALTELVAFDTADGVYDL---AWSESHDSLLIAAVADGSVKIY-DTALPPTANPIR 100
SP +P + V+ D+ VYDL A + +H +L I A + I + PP A P
Sbjct: 154 SPHSPDILSCVSSDSYLRVYDLRTPASASNHLTLQIPIHAAPASPIPGNPGAPPAACPPS 213
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS--VRTFKEHAYCVYNATWN 158
H D+N R + D T++ + + P H Y V W+
Sbjct: 214 EALTH-------DWNKYRPSVVAVAGVDRTIRTFDIRAPQQGPQAIMIGHDYAVRRVAWS 266
Query: 159 PRHSDVFCSASGDCTLRIW 177
P S+V SAS D T R W
Sbjct: 267 PHLSNVLLSASYDMTCRAW 285
Score = 94 (38.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 26/116 (22%), Positives = 52/116 (44%)
Query: 152 VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII--PAHEFEILACDWNKYDDCLIA 209
+Y+ W+ + +A+GD +++++D + I H E+ + WN
Sbjct: 62 LYDLAWSEANEHQVLTATGDGSIKLFD-STLNDFPIQNWKEHNREVFSVSWNLVAKDTFC 120
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S+S D +++IW + + L H FSPH ++L+ S D + ++D
Sbjct: 121 SSSWDGTVRIWSPQRPH-SLVTLPTHS-CTYSASFSPHSPDILSCVSSDSYLRVYD 174
Score = 85 (35.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 157 WNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
WN V A D T+R +D+R + G I+ H++ + W+ + ++ SAS D
Sbjct: 220 WNKYRPSVVAVAGVDRTIRTFDIRAPQQGPQAIMIGHDYAVRRVAWSPHLSNVLLSASYD 279
Query: 215 KSIKIW 220
+ + W
Sbjct: 280 MTCRAW 285
Score = 70 (29.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 68 WSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW 127
W++ S++ A D +++ +D P P + H V ++P + +++S+
Sbjct: 220 WNKYRPSVVAVAGVDRTIRTFDIRAPQQG-PQAIMIGHDYAVRRVAWSPHLSNVLLSASY 278
Query: 128 DDTVKLWTVDRPTSV 142
D T + W+ P V
Sbjct: 279 DMTCRAWSDQSPPGV 293
Score = 51 (23.0 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 192 EFEILACDWNKY-DDCLIASASVDKSIKIWDVR 223
EF + DW + + AS D+S+ +WDVR
Sbjct: 320 EF-VTGVDWCLFGSEGWCASVGWDESVYVWDVR 351
Score = 41 (19.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 54 LVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPP 94
++ D A V +AWS ++L++A D + + + PP
Sbjct: 253 MIGHDYA--VRRVAWSPHLSNVLLSASYDMTCRAWSDQSPP 291
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 129/285 (45%), Positives = 190/285 (66%)
Query: 9 NGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAW 68
+GY+ +FSP+ RLA A AQ++GI G G + +LD + + L +FD D ++D+ W
Sbjct: 18 HGYAAEFSPYLPGRLACAAAQHYGIAGCGTLLILDHNESG--LRIFRSFDWTDALFDVTW 75
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SW 127
SE+++ +L+ DGS++++DTA A P++ EHT+EV+S D++ TR + + S SW
Sbjct: 76 SENNEHVLVTCSGDGSLQLWDTA--GAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSW 133
Query: 128 DDTVKLW--TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
D TVKLW TV R S+ TFK H +Y+ W+P F SASGD TLRIWDV+ G
Sbjct: 134 DQTVKLWDPTVGR--SLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVR 191
Query: 186 MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
+++PAH+ EIL+CDW KY++ L+ + +VD S++ WD+RN R P+ L GH YA+R+VKFS
Sbjct: 192 IVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFS 251
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSV 290
P ++LASCSYD TV W+F + L+ +HHTEF G+D+S+
Sbjct: 252 PFYASVLASCSYDFTVRFWNFSKPNPLLETVEHHTEFTCGLDLSL 296
Score = 190 (71.9 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 54/188 (28%), Positives = 85/188 (45%)
Query: 123 ITSSWDDTVKLW-TVDRPTSVRTFKEHAYCVYNATWNP-RHSDVFCSASGDCTLRIWDVR 180
+T S D +++LW T ++ +KEH VY+ W+ R + S S D T+++WD
Sbjct: 84 VTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 143
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
S HE I + W+ + ASAS D++++IWDV+ V I V+ H +
Sbjct: 144 VGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRI-VVPAHQAEIL 202
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ + NLL + + D ++ WD V HT V S +LAS
Sbjct: 203 SCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCS 262
Query: 301 WDELVYVW 308
+D V W
Sbjct: 263 YDFTVRFW 270
>SGD|S000002549 [details] [associations]
symbol:PEX7 "Peroxisomal signal receptor for peroxisomal
matrix proteins" species:4932 "Saccharomyces cerevisiae"
[GO:0005777 "peroxisome" evidence=IEA;IDA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;IDA;IPI]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016560 "protein import
into peroxisome matrix, docking" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002549 GO:GO:0005829 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 EMBL:Z48179
GO:GO:0016560 EMBL:Z54139 HOGENOM:HOG000204332 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 GeneTree:ENSGT00700000104578
eggNOG:NOG320380 OrthoDB:EOG46X2JK EMBL:X81424 EMBL:X83704
EMBL:AY557700 PIR:S50228 RefSeq:NP_010426.1
ProteinModelPortal:P39108 SMR:P39108 DIP:DIP-1501N IntAct:P39108
MINT:MINT-409587 STRING:P39108 PaxDb:P39108 PeptideAtlas:P39108
EnsemblFungi:YDR142C GeneID:851720 KEGG:sce:YDR142C CYGD:YDR142c
OMA:FKEHERE NextBio:969424 Genevestigator:P39108 GermOnline:YDR142C
Uniprot:P39108
Length = 375
Score = 308 (113.5 bits), Expect = 4.2e-54, Sum P(3) = 4.2e-54
Identities = 55/137 (40%), Positives = 94/137 (68%)
Query: 8 FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLA 67
F+GY V++SPF+++RLAVA NFG++GNG++ +L++ + + E+ +F T D ++DLA
Sbjct: 9 FSGYGVQYSPFFDNRLAVAAGSNFGLVGNGKLFILEIDRSG-RIVEVNSFLTQDCLFDLA 67
Query: 68 WSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW 127
W+ESH++ ++ A DG+++++DT PI EH REV S ++N R +F++SSW
Sbjct: 68 WNESHENQVLVAQGDGTLRLFDTTFKEF--PIAIFKEHEREVFSCNWNLVNRQNFLSSSW 125
Query: 128 DDTVKLWTVDRPTSVRT 144
D ++K+W+ R S+ T
Sbjct: 126 DGSIKIWSPLRKQSLMT 142
Score = 190 (71.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 51 LTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVH 110
+ E+ +F T D ++DLAW+ESH++ ++ A DG+++++DT PI EH REV
Sbjct: 51 IVEVNSFLTQDCLFDLAWNESHENQVLVAQGDGTLRLFDTTFKEF--PIAIFKEHEREVF 108
Query: 111 SADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG 170
S ++N R +F++SSWD ++K+W+ R S+ T PR ++ +
Sbjct: 109 SCNWNLVNRQNFLSSSWDGSIKIWSPLRKQSLMTL------------TPRPLEI--TKMV 154
Query: 171 DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR--NYRVP 228
D L +++ T I + ++ +D L+ S S + ++D+R + +
Sbjct: 155 D-PLNAIILKKKSFTGISKNRNC-VYQAQFSPHDQNLVLSCSGNSYASLFDIRLPSGKNQ 212
Query: 229 IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
L G F+ +R ++A+ D + +WD
Sbjct: 213 NNFLVHSGLEALTCDFNKYRPYVVATGGVDNAIRIWD 249
Score = 151 (58.2 bits), Expect = 4.2e-54, Sum P(3) = 4.2e-54
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW----- 264
SA++ +++ + N + N HG A+RKV +SPH N+L S SYDMT +W
Sbjct: 258 SATIKRTVP-GQLHNSSCINEIPNAHGLAIRKVTWSPHHSNILMSASYDMTCRIWRDLSN 316
Query: 265 DFMVE-------DALVG---RYDHHTEFAVGVDMSVLVE-GLLASTGWDELVYVW 308
D E DA G + H+EF G D S+ + G +AST WD ++VW
Sbjct: 317 DGAKETYKTNSTDATKGSIFNFTQHSEFVFGADWSLWGKPGYVASTAWDGNLFVW 371
Score = 129 (50.5 bits), Expect = 4.2e-54, Sum P(3) = 4.2e-54
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVR-EMGSTMI-IPAHE-FEILACDWNKYDDCL 207
CVY A ++P ++ S SG+ ++D+R G H E L CD+NKY +
Sbjct: 176 CVYQAQFSPHDQNLVLSCSGNSYASLFDIRLPSGKNQNNFLVHSGLEALTCDFNKYRPYV 235
Query: 208 IASASVDKSIKIWDVR 223
+A+ VD +I+IWD+R
Sbjct: 236 VATGGVDNAIRIWDIR 251
Score = 86 (35.3 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIW-DVREMGS 184
H + TW+P HS++ SAS D T RIW D+ G+
Sbjct: 282 HGLAIRKVTWSPHHSNILMSASYDMTCRIWRDLSNDGA 319
Score = 69 (29.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 16/74 (21%), Positives = 31/74 (41%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
VY +S +L+++ + ++D LP N L E + D+N R
Sbjct: 177 VYQAQFSPHDQNLVLSCSGNSYASLFDIRLPSGKNQNNFLVHSGLEALTCDFNKYRPYVV 236
Query: 123 ITSSWDDTVKLWTV 136
T D+ +++W +
Sbjct: 237 ATGGVDNAIRIWDI 250
Score = 67 (28.6 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL-VGRYDHHTEF-AVGVDMSVLVEGLL 296
V + +FSPH +NL+ SCS + L+D + + H+ A+ D + ++
Sbjct: 177 VYQAQFSPHDQNLVLSCSGNSYASLFDIRLPSGKNQNNFLVHSGLEALTCDFNKYRPYVV 236
Query: 297 ASTGWDELVYVW 308
A+ G D + +W
Sbjct: 237 ATGGVDNAIRIW 248
Score = 58 (25.5 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 188 IP-AHEFEILACDWNKYDDCLIASASVDKSIKIW-DVRN 224
IP AH I W+ + ++ SAS D + +IW D+ N
Sbjct: 278 IPNAHGLAIRKVTWSPHHSNILMSASYDMTCRIWRDLSN 316
>POMBASE|SPAC17D4.01 [details] [associations]
symbol:pex7 "peroxin-7 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000268 "peroxisome targeting
sequence binding" evidence=ISO] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC17D4.01 GO:GO:0005829
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005782 GO:GO:0016558 GO:GO:0000268
GO:GO:0006625 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR
GO:GO:0005053 PANTHER:PTHR22850:SF4 EMBL:D89147 PIR:T42423
PIR:T50123 RefSeq:XP_001713109.1 ProteinModelPortal:P78798
STRING:P78798 EnsemblFungi:SPAC17D4.01.1 GeneID:5802962
KEGG:spo:SPAC17D4.01 eggNOG:NOG320380 OrthoDB:EOG46X2JK
NextBio:20892270 Uniprot:P78798
Length = 308
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 97/307 (31%), Positives = 169/307 (55%)
Query: 5 KTP-FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGV 63
+TP F G SV+FSP E+++AVA ++G+ G+GR+++ D++P + + +D D +
Sbjct: 5 RTPGFQGESVQFSPLVENKIAVAAVTHYGLGGSGRLYIHDVTPKGIQVCQ--HYDVEDSL 62
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI 123
+ + WS++ ++ + A DGS++++D +P + PI EH E+ + D N R +
Sbjct: 63 FGVRWSQNCENQVYACCGDGSLRLFDLTMP--SKPIHKWKEHKAEIVAIDTNTVDRRIVV 120
Query: 124 TSSWDDTVKLWTVDRPTSVRTFKEHAYC-VYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
T SWD T+KLW + P SV+T + + + ++ S D + WD R
Sbjct: 121 TGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRSS 180
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
M I +I +W+K + ++ +A + + +D+ N + P++VL+GH AVR +
Sbjct: 181 DKFMSIEIPN-QITCMNWSKSNHRMVYTADNNNLVYCYDIANLKTPLSVLSGHQLAVRSI 239
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGW 301
K S +LLA+ SYDMT ++D + + + + D H+EF VD S +G +AS GW
Sbjct: 240 KSSNSAHDLLATASYDMTSRIFD-PEQHSCIRKVDLHSEFVRDVDWSDFGDGSWIASVGW 298
Query: 302 DELVYVW 308
DE +Y+W
Sbjct: 299 DESLYIW 305
>CGD|CAL0000686 [details] [associations]
symbol:PEX7 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;ISO] [GO:0016560
"protein import into peroxisome matrix, docking" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000686 GO:GO:0005829 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 371 (135.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 76/265 (28%), Positives = 150/265 (56%)
Query: 4 FKTP-FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADG 62
F+T +NGY +++SPFY+++LAVATA N+G++GNGR+ +L++ P +++ ++++T DG
Sbjct: 4 FRTKGYNGYGIQYSPFYDNKLAVATAANYGLVGNGRLFILNIEPNG-TVSDQISWETQDG 62
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++D+AWSE H++ + A DG++K++D +P P+ + EH+REV ++N + +F
Sbjct: 63 LFDIAWSEIHENQAVVASGDGTLKLFDLTVPNF--PVMNWKEHSREVFCVNWNLVDKTNF 120
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
++ SWD +KLW+ +RP S+ T + Y+ P S + ++
Sbjct: 121 VSGSWDGNIKLWSPNRPQSLLTLNSNVMD-YSTRVAPNAGSASVPLSHQPAHQ---PQQQ 176
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV-LNGHG-YAVR 240
+ A+ I + ++ + ++ S + +++WDVR+ P+ + HG
Sbjct: 177 QQQQVNTANC--IYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPN-PLQLKFTAHGGLEAL 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWD 265
V ++ ++ ++AS D +V +WD
Sbjct: 234 SVDWNKYKSTVIASGGTDKSVRIWD 258
Score = 174 (66.3 bits), Expect = 7.2e-25, Sum P(2) = 7.2e-25
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 228 PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW-DFMVEDA---------LVGRYD 277
P+ L GH +AVR+V++SPH L S SYDMT +W D E A L G +
Sbjct: 284 PLNELIGHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDESDERARFLNSRVGGLKGVFG 343
Query: 278 HHTEFAVGVDMSVLVE-GLLASTGWDELVYVW 308
H EF +G D S+ E G +A+TGWDE+VY+W
Sbjct: 344 RHKEFVIGSDYSLWGEPGWVATTGWDEMVYIW 375
Score = 172 (65.6 bits), Expect = 7.2e-25, Sum P(2) = 7.2e-25
Identities = 57/234 (24%), Positives = 112/234 (47%)
Query: 11 YSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLS-PAAPALTELVAFDTADGVYDLAWS 69
+ + +S +E++ VA+ G+G + + DL+ P P + + + V+ + W+
Sbjct: 64 FDIAWSEIHENQAVVAS-------GDGTLKLFDLTVPNFPVMNWK---EHSREVFCVNWN 113
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
+ ++ DG++K++ P + + +L+ + + +S P + + S
Sbjct: 114 LVDKTNFVSGSWDGNIKLWSPNRPQS---LLTLNSNVMD-YSTRVAPNAGSASVPLSHQP 169
Query: 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-I 188
+ + V T A C+Y+A ++P + S +G +++WDVR +
Sbjct: 170 AHQPQQ-QQQQQVNT----ANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKF 224
Query: 189 PAHE-FEILACDWNKYDDCLIASASVDKSIKIWDVRNY-RV--PIA---VLNGH 235
AH E L+ DWNKY +IAS DKS++IWD+R+ ++ PIA + +GH
Sbjct: 225 TAHGGLEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGH 278
Score = 140 (54.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 55/253 (21%), Positives = 109/253 (43%)
Query: 64 YDLAWSESHDS-LLIAAVAD----GSVKIYDTALPPTANPIRSLHEHTRE-VHSADYNPT 117
Y + +S +D+ L +A A+ G+ +++ + P + T++ + ++
Sbjct: 12 YGIQYSPFYDNKLAVATAANYGLVGNGRLFILNIEPNGTVSDQISWETQDGLFDIAWSEI 71
Query: 118 RRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
+ + +S D T+KL+ + P V +KEH+ V+ WN F S S D +++
Sbjct: 72 HENQAVVASGDGTLKLFDLTVPNFPVMNWKEHSREVFCVNWNLVDKTNFVSGSWDGNIKL 131
Query: 177 WDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
W S + + ++ D++ SASV S + + V +
Sbjct: 132 WSPNRPQSLLTLNSN-----VMDYSTRVAPNAGSASVPLSHQPAHQPQQQQQQQVNTAN- 185
Query: 237 YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF-AVGVDMSVLVEGL 295
+ +FSPH +++ SC+ V +WD + L ++ H A+ VD + +
Sbjct: 186 -CIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKFTAHGGLEALSVDWNKYKSTV 244
Query: 296 LASTGWDELVYVW 308
+AS G D+ V +W
Sbjct: 245 IASGGTDKSVRIW 257
Score = 41 (19.5 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 281 EFAVG-VDMSVLVEGLLASTGWDELVYVWQQGMDPRA 316
EFAV V S L ST +D +W D RA
Sbjct: 292 EFAVRRVQWSPHNPKELMSTSYDMTARIWNDESDERA 328
>UNIPROTKB|Q59WW3 [details] [associations]
symbol:PEX7 "Potential intraperoxisomal protein receptor
Pex7" species:237561 "Candida albicans SC5314" [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0016560 "protein import into peroxisome matrix,
docking" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000686 GO:GO:0005829
GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 371 (135.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 76/265 (28%), Positives = 150/265 (56%)
Query: 4 FKTP-FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADG 62
F+T +NGY +++SPFY+++LAVATA N+G++GNGR+ +L++ P +++ ++++T DG
Sbjct: 4 FRTKGYNGYGIQYSPFYDNKLAVATAANYGLVGNGRLFILNIEPNG-TVSDQISWETQDG 62
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++D+AWSE H++ + A DG++K++D +P P+ + EH+REV ++N + +F
Sbjct: 63 LFDIAWSEIHENQAVVASGDGTLKLFDLTVPNF--PVMNWKEHSREVFCVNWNLVDKTNF 120
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
++ SWD +KLW+ +RP S+ T + Y+ P S + ++
Sbjct: 121 VSGSWDGNIKLWSPNRPQSLLTLNSNVMD-YSTRVAPNAGSASVPLSHQPAHQ---PQQQ 176
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV-LNGHG-YAVR 240
+ A+ I + ++ + ++ S + +++WDVR+ P+ + HG
Sbjct: 177 QQQQVNTANC--IYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPN-PLQLKFTAHGGLEAL 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWD 265
V ++ ++ ++AS D +V +WD
Sbjct: 234 SVDWNKYKSTVIASGGTDKSVRIWD 258
Score = 174 (66.3 bits), Expect = 7.2e-25, Sum P(2) = 7.2e-25
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 228 PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW-DFMVEDA---------LVGRYD 277
P+ L GH +AVR+V++SPH L S SYDMT +W D E A L G +
Sbjct: 284 PLNELIGHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDESDERARFLNSRVGGLKGVFG 343
Query: 278 HHTEFAVGVDMSVLVE-GLLASTGWDELVYVW 308
H EF +G D S+ E G +A+TGWDE+VY+W
Sbjct: 344 RHKEFVIGSDYSLWGEPGWVATTGWDEMVYIW 375
Score = 172 (65.6 bits), Expect = 7.2e-25, Sum P(2) = 7.2e-25
Identities = 57/234 (24%), Positives = 112/234 (47%)
Query: 11 YSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLS-PAAPALTELVAFDTADGVYDLAWS 69
+ + +S +E++ VA+ G+G + + DL+ P P + + + V+ + W+
Sbjct: 64 FDIAWSEIHENQAVVAS-------GDGTLKLFDLTVPNFPVMNWK---EHSREVFCVNWN 113
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
+ ++ DG++K++ P + + +L+ + + +S P + + S
Sbjct: 114 LVDKTNFVSGSWDGNIKLWSPNRPQS---LLTLNSNVMD-YSTRVAPNAGSASVPLSHQP 169
Query: 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-I 188
+ + V T A C+Y+A ++P + S +G +++WDVR +
Sbjct: 170 AHQPQQ-QQQQQVNT----ANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKF 224
Query: 189 PAHE-FEILACDWNKYDDCLIASASVDKSIKIWDVRNY-RV--PIA---VLNGH 235
AH E L+ DWNKY +IAS DKS++IWD+R+ ++ PIA + +GH
Sbjct: 225 TAHGGLEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGH 278
Score = 140 (54.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 55/253 (21%), Positives = 109/253 (43%)
Query: 64 YDLAWSESHDS-LLIAAVAD----GSVKIYDTALPPTANPIRSLHEHTRE-VHSADYNPT 117
Y + +S +D+ L +A A+ G+ +++ + P + T++ + ++
Sbjct: 12 YGIQYSPFYDNKLAVATAANYGLVGNGRLFILNIEPNGTVSDQISWETQDGLFDIAWSEI 71
Query: 118 RRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
+ + +S D T+KL+ + P V +KEH+ V+ WN F S S D +++
Sbjct: 72 HENQAVVASGDGTLKLFDLTVPNFPVMNWKEHSREVFCVNWNLVDKTNFVSGSWDGNIKL 131
Query: 177 WDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
W S + + ++ D++ SASV S + + V +
Sbjct: 132 WSPNRPQSLLTLNSN-----VMDYSTRVAPNAGSASVPLSHQPAHQPQQQQQQQVNTAN- 185
Query: 237 YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF-AVGVDMSVLVEGL 295
+ +FSPH +++ SC+ V +WD + L ++ H A+ VD + +
Sbjct: 186 -CIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKFTAHGGLEALSVDWNKYKSTV 244
Query: 296 LASTGWDELVYVW 308
+AS G D+ V +W
Sbjct: 245 IASGGTDKSVRIW 257
Score = 41 (19.5 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 281 EFAVG-VDMSVLVEGLLASTGWDELVYVWQQGMDPRA 316
EFAV V S L ST +D +W D RA
Sbjct: 292 EFAVRRVQWSPHNPKELMSTSYDMTARIWNDESDERA 328
>UNIPROTKB|O59894 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:4922 "Komagataella pastoris" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 EMBL:AF021797
ProteinModelPortal:O59894 Uniprot:O59894
Length = 376
Score = 305 (112.4 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 57/149 (38%), Positives = 103/149 (69%)
Query: 4 FKTP-FNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADG 62
F+T F+GY+V++SPFY++++AVAT+ N+G++GNGR++VL + +T+ +++DT DG
Sbjct: 4 FQTNGFSGYAVRYSPFYDNKIAVATSANYGLVGNGRLYVLSIMDDGNIITD-ISYDTQDG 62
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ +AWSE++++ ++ + DG V ++DT L P+ EH REV S D++ ++ F
Sbjct: 63 LFGVAWSETNENHVLTSSGDGCVSLFDTTLKDY--PVMKFTEHQREVFSVDWSNIDKNLF 120
Query: 123 ITSSWDDTVKLWTV--DRPTSVRTFKEHA 149
++SWD +VK+W+ +R TS+ T + A
Sbjct: 121 CSASWDGSVKVWSPGSNRNTSLLTLRSLA 149
Score = 252 (93.8 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 84/254 (33%), Positives = 124/254 (48%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V+ + WS +L +A DGSVK++ P +N SL R + S + R +
Sbjct: 107 VFSVDWSNIDKNLFCSASWDGSVKVWS----PGSNRNTSLLT-LRSLASREEKTGRIEKP 161
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
I V + + RP ++R ++ CVY+A ++ ++ S + D L++WD R
Sbjct: 162 IPVVQPSQVPM-SKTRP-NIRN--DNNDCVYDAKFSFHDPNIIMSCNSDSHLQLWDTRLP 217
Query: 183 GST-MIIPAHE-FEILACDWNKYDDCLIASASVDKSIKIWDVR----N-YRVPIAVLN-- 233
M AH E L+CD+N+Y ++ASA VDK K+WD R N + P LN
Sbjct: 218 NPLFMDFVAHNGLEALSCDFNRYRPFVVASAGVDKLAKVWDTRMIQPNVHSRPPRALNKF 277
Query: 234 -GHGYAVRKVKFSPHRRNLLASCSYDMTVCLW-DFMVEDALVGRYD-----H-------- 278
GH +A+RK+ +SPH L +CSYDMTV +W D + VG D H
Sbjct: 278 MGHEFAIRKLAWSPHGPTQLLTCSYDMTVRVWNDSPSPTSRVGLLDGASQPHAPPCSKIF 337
Query: 279 --HTEFAVGVDMSV 290
HTEF +G D S+
Sbjct: 338 SAHTEFVMGCDWSL 351
Score = 177 (67.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 65/262 (24%), Positives = 121/262 (46%)
Query: 64 YDLAWSESHDS-LLIAAVAD----GSVKIYDTALPPTANPIRSLHEHTRE-VHSADYNPT 117
Y + +S +D+ + +A A+ G+ ++Y ++ N I + T++ + ++ T
Sbjct: 12 YAVRYSPFYDNKIAVATSANYGLVGNGRLYVLSIMDDGNIITDISYDTQDGLFGVAWSET 71
Query: 118 RRDSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
+ +TSS D V L+ T + V F EH V++ W+ ++FCSAS D ++++
Sbjct: 72 NENHVLTSSGDGCVSLFDTTLKDYPVMKFTEHQREVFSVDWSNIDKNLFCSASWDGSVKV 131
Query: 177 WDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIA-----V 231
W +T ++ LA K + ++K I + V+ +VP++ +
Sbjct: 132 WSPGSNRNTSLLTLRS---LASREEK-------TGRIEKPIPV--VQPSQVPMSKTRPNI 179
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF-AVGVDMSV 290
N + V KFS H N++ SC+ D + LWD + + L + H A+ D +
Sbjct: 180 RNDNNDCVYDAKFSFHDPNIIMSCNSDSHLQLWDTRLPNPLFMDFVAHNGLEALSCDFNR 239
Query: 291 LVEGLLASTGWDELVYVWQQGM 312
++AS G D+L VW M
Sbjct: 240 YRPFVVASAGVDKLAKVWDTRM 261
Score = 113 (44.8 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 33/132 (25%), Positives = 58/132 (43%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI-RSLHEHTR-EVHSADYN 115
D D VYD +S +++++ +D ++++DT LP NP+ H E S D+N
Sbjct: 182 DNNDCVYDAKFSFHDPNIIMSCNSDSHLQLWDTRLP---NPLFMDFVAHNGLEALSCDFN 238
Query: 116 PTRRDSFITSSWDDTVKLWTV--------DRPT-SVRTFKEHAYCVYNATWNPRHSDVFC 166
R ++ D K+W RP ++ F H + + W+P
Sbjct: 239 RYRPFVVASAGVDKLAKVWDTRMIQPNVHSRPPRALNKFMGHEFAIRKLAWSPHGPTQLL 298
Query: 167 SASGDCTLRIWD 178
+ S D T+R+W+
Sbjct: 299 TCSYDMTVRVWN 310
Score = 99 (39.9 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 276 YDHHTEFAVGVDMSVLVE-GLLASTGWDELVYVW 308
+ HTEF +G D S+ E G + +TGWDE+VYVW
Sbjct: 337 FSAHTEFVMGCDWSLWGEPGWVVTTGWDEMVYVW 370
Score = 51 (23.0 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVR 223
I AH ++ CDW+ + + + + D+ + +W+ +
Sbjct: 336 IFSAHTEFVMGCDWSLWGEPGWVVTTGWDEMVYVWNTQ 373
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 88/270 (32%), Positives = 138/270 (51%)
Query: 50 ALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIY-----DTA---LPPTANPIRS 101
+L EL + +DG++D+AW + A DGS++I+ ++A L P P+
Sbjct: 60 SLGELCRLEWSDGLFDVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPK-QPLIC 118
Query: 102 LHEHTREVHSADYNPT-RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
L EH EV+S D+ + ++ SWD T+KLW +R S+ TF H +Y A ++P
Sbjct: 119 LQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNSITTFVGHNDLIYGAKFSPL 178
Query: 161 HSDVFCSASGDCTLRIWDVREMGST--MIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218
+++F S S D L +W+ + M I AH E L CDW+ +D ++ + D I+
Sbjct: 179 IANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIR 238
Query: 219 IWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278
WD+R R + L +AVR++ SPH +LAS +YD T +W+ ++
Sbjct: 239 GWDLRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLERGESAQEVNAR 298
Query: 279 HTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HTEF G+D + LA GWD L V+
Sbjct: 299 HTEFVCGLDWNPHRTHQLADCGWDSLANVY 328
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 62/189 (32%), Positives = 102/189 (53%)
Query: 6 TPFNGYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDL-------SPAAPALTELVAFD 58
T +GYS++FSPF + L +AT+Q +G+ G G + +L+ S +L EL +
Sbjct: 9 TDRHGYSLRFSPFEANYLLLATSQLYGLAGGGSLFLLEQNSNTNSSSTDGQSLGELCRLE 68
Query: 59 TADGVYDLAWSESHDSLLIAAVADGSVKIY-----DTA---LPPTANPIRSLHEHTREVH 110
+DG++D+AW + A DGS++I+ ++A L P P+ L EH EV+
Sbjct: 69 WSDGLFDVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPK-QPLICLQEHKNEVY 127
Query: 111 SADYNPT-RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSAS 169
S D+ + ++ SWD T+KLW +R S+ TF H +Y A ++P +++F S S
Sbjct: 128 SLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNSITTFVGHNDLIYGAKFSPLIANLFASVS 187
Query: 170 GDCTLRIWD 178
D L +W+
Sbjct: 188 TDGHLNLWN 196
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 265 (98.3 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 57/178 (32%), Positives = 89/178 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-------TFKE 147
T NP+ L HT+E + +NP + +++S D TV W ++ +V FK
Sbjct: 161 TFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKG 220
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H V + W+ H VF S D L IWDVR I AH E+ +N Y + +
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFI 280
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+A+ S DK++ +WD+RN R+ + H + +V++SPH +LAS D + +WD
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Score = 209 (78.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 63/220 (28%), Positives = 98/220 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV---RTF------KEHAYCVYNA 155
H EV+ A Y P + + T S V ++ + ++V TF K H Y
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 178
Query: 156 TWNPRHSDVFCSASGDCTLRIWDVR-------EMGSTMIIPAHEFEILACDWNKYDDCLI 208
+WNP + SAS D T+ WD+ E+ + + HE + W+ D +
Sbjct: 179 SWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVF 238
Query: 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268
S DK + IWDVR P ++ H V + F+P+ +LA+ S D TV LWD
Sbjct: 239 GSVGDDKKLLIWDVRT-STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 269 EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ ++ H + V S E +LAS+G D+ ++VW
Sbjct: 298 LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 53 ELVAFDTADG----VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTRE 108
EL A D G V D+AW HD + + D + I+D T+ P + H+ E
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVR---TSTPGHCIDAHSAE 267
Query: 109 VHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCS 167
V+ +NP T S D TV LW + + + +F+ H ++ W+P + + S
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILAS 327
Query: 168 ASGDCTLRIWDVREMGSTM--------------IIPAHEFEILACDWNKYDDCLIASASV 213
+ D L +WD+ ++G I H +I WN + ++ S S
Sbjct: 328 SGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSE 387
Query: 214 DKSIKIWDV 222
D +++W +
Sbjct: 388 DNILQVWQM 396
Score = 150 (57.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 41/170 (24%), Positives = 78/170 (45%)
Query: 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPIRS---LHEHTREVHSADY 114
T +G Y L+W+ + + L+++A D +V +D A A +++ H V +
Sbjct: 172 TKEG-YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAW 230
Query: 115 NPTRRDSFITSSWDDT-VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT 173
+ D S DD + +W V T H+ V +NP + + S D T
Sbjct: 231 H-VLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKT 289
Query: 174 LRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ +WD+R + + +H EI W+ +++ ++AS+ DK + +WD+
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 265 (98.3 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 57/178 (32%), Positives = 89/178 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-------TFKE 147
T NP+ L HT+E + +NP + +++S D TV W ++ +V FK
Sbjct: 161 TFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKG 220
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H V + W+ H VF S D L IWDVR I AH E+ +N Y + +
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFI 280
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+A+ S DK++ +WD+RN R+ + H + +V++SPH +LAS D + +WD
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Score = 209 (78.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 63/220 (28%), Positives = 98/220 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV---RTF------KEHAYCVYNA 155
H EV+ A Y P + + T S V ++ + ++V TF K H Y
Sbjct: 119 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 178
Query: 156 TWNPRHSDVFCSASGDCTLRIWDVR-------EMGSTMIIPAHEFEILACDWNKYDDCLI 208
+WNP + SAS D T+ WD+ E+ + + HE + W+ D +
Sbjct: 179 SWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVF 238
Query: 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268
S DK + IWDVR P ++ H V + F+P+ +LA+ S D TV LWD
Sbjct: 239 GSVGDDKKLLIWDVRT-STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 269 EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ ++ H + V S E +LAS+G D+ ++VW
Sbjct: 298 LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 53 ELVAFDTADG----VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTRE 108
EL A D G V D+AW HD + + D + I+D T+ P + H+ E
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVR---TSTPGHCIDAHSAE 267
Query: 109 VHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCS 167
V+ +NP T S D TV LW + + + +F+ H ++ W+P + + S
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILAS 327
Query: 168 ASGDCTLRIWDVREMGSTM--------------IIPAHEFEILACDWNKYDDCLIASASV 213
+ D L +WD+ ++G I H +I WN + ++ S S
Sbjct: 328 SGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSE 387
Query: 214 DKSIKIWDV 222
D +++W +
Sbjct: 388 DNILQVWQM 396
Score = 150 (57.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 41/170 (24%), Positives = 78/170 (45%)
Query: 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPIRS---LHEHTREVHSADY 114
T +G Y L+W+ + + L+++A D +V +D A A +++ H V +
Sbjct: 172 TKEG-YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAW 230
Query: 115 NPTRRDSFITSSWDDT-VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT 173
+ D S DD + +W V T H+ V +NP + + S D T
Sbjct: 231 H-VLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKT 289
Query: 174 LRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ +WD+R + + +H EI W+ +++ ++AS+ DK + +WD+
Sbjct: 290 VALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 257 (95.5 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 55/178 (30%), Positives = 87/178 (48%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR-------TFKE 147
T NP+ L HT+E + +NP + +++S D TV W ++ FK
Sbjct: 161 TFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKG 220
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H V + W+ H VF S D L IWD+R I AH E+ +N Y + +
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFI 280
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+A+ S DK++ +WD+RN R+ + H + +V++SPH +LAS D + +WD
Sbjct: 281 LATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWD 338
Score = 215 (80.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 65/220 (29%), Positives = 97/220 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV---RTF------KEHAYCVYNA 155
H EV+ A Y P + T S V ++ + SV TF K H Y
Sbjct: 119 HEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGL 178
Query: 156 TWNPRHSDVFCSASGDCTLRIWDVR-------EMGSTMIIPAHEFEILACDWNKYDDCLI 208
+WNP + SAS D T+ WD+ E+ + I HE + W+ D +
Sbjct: 179 SWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVF 238
Query: 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268
S DK + IWD+R VP ++ H V + F+P+ +LA+ S D TV LWD
Sbjct: 239 GSVGDDKKLLIWDLRT-NVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 269 EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ ++ H + V S E +LAS+G D+ ++VW
Sbjct: 298 LRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Score = 160 (61.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 43 DLSPAAPALTELVAFDTADG----VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
D++ A A EL A + G V D+AW HD + + D + I+D T P
Sbjct: 201 DINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLR---TNVP 257
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATW 157
++ H+ EV+ +NP T S D TV LW + + + +F+ H ++ W
Sbjct: 258 GHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQW 317
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM--------------IIPAHEFEILACDWNKY 203
+P + + S+ D L +WD+ ++G I H +I WN
Sbjct: 318 SPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPN 377
Query: 204 DDCLIASASVDKSIKIWDV 222
+ ++ S S D +++W +
Sbjct: 378 EPWVVCSVSEDNILQVWQM 396
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN---PIRSLHE-HTREVHSADY 114
T +G Y L+W+ + + L+++A D +V +D AN R + + H V +
Sbjct: 172 TKEG-YGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAW 230
Query: 115 NPTRRDSFITSSWDDTVKLWTVDRPTSV--RTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
+ D S DD KL D T+V H+ V +NP + + S D
Sbjct: 231 H-VLHDGVFGSVGDDK-KLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADK 288
Query: 173 TLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
T+ +WD+R + + +H EI W+ +++ ++AS+ DK + +WD+
Sbjct: 289 TVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 70/243 (28%), Positives = 117/243 (48%)
Query: 71 SHDSLLIAAVADGSVKIY--DTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD 128
S LL +A AD +++ Y +T P A P++ H + ++ R FI S+ D
Sbjct: 34 SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDAR--FIVSASD 91
Query: 129 D-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D T+KLW V+ + ++T H + +NP+ S++ S S D T+RIWDV +
Sbjct: 92 DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTTGKCLKV 150
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
+PAH + A D+N+ D LI S+S D +IWD +++ V V+FSP+
Sbjct: 151 LPAHSDPVTAVDFNR-DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDH-HTEFAVGVDMSVLVEGLLASTGWDELVY 306
+ +L + D T+ LW+ L H + ++ + SV + S D V+
Sbjct: 210 GKFILVG-TLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 307 VWQ 309
+W+
Sbjct: 269 MWE 271
Score = 149 (57.5 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 50/154 (32%), Positives = 74/154 (48%)
Query: 164 VFCSASGDCTLRIWDVREMGSTMIIPAHEF---EILACDWNKYDDC-LIASASVDKSIKI 219
+ SAS D T+R + + + + P EF E D D I SAS DK++K+
Sbjct: 38 LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKL 97
Query: 220 WDVRNYRVPIAVLNGH-GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278
WDV + I L GH YA V F+P + N++ S S+D TV +WD L
Sbjct: 98 WDVETGSL-IKTLIGHTNYAFC-VNFNP-QSNMIVSGSFDETVRIWDVTTGKCLKV-LPA 153
Query: 279 HTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQG 311
H++ VD + +G L+ S+ +D L +W G
Sbjct: 154 HSDPVTAVDFNR--DGSLIVSSSYDGLCRIWDSG 185
Score = 129 (50.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 46/196 (23%), Positives = 87/196 (44%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS--FITSSWDDTV 131
+++++ D +V+I+D T ++ L H+ V + D+N RD ++SS+D
Sbjct: 126 NMIVSGSFDETVRIWDVT---TGKCLKVLPAHSDPVTAVDFN---RDGSLIVSSSYDGLC 179
Query: 132 KLWTVDRPTSVRTF-KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
++W V+T + V ++P + D TLR+W++
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTL-DNTLRLWNISSAKFLKTYTG 238
Query: 191 HEFE--ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHR 248
H ++ ++ + I S S D + +W++ + ++ + L GH V V P
Sbjct: 239 HVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL-LQKLEGHTETVMNVACHP-T 296
Query: 249 RNLLASCSYDMTVCLW 264
NL+AS S D TV +W
Sbjct: 297 ENLIASGSLDKTVRIW 312
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 253 (94.1 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 65/246 (26%), Positives = 116/246 (47%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+AWS +LL A +G V ++D + + +EH R H+ ++ + + I+
Sbjct: 70 DVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILIS 129
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S D T+K + + S+ T+ ++ V + ++P ++F + S + T+++WD+R+
Sbjct: 130 GSQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDK 189
Query: 185 TMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAV-RKV 242
M+ AH + CDW+ + L A+ S DK IK+W++ P H AV +V
Sbjct: 190 CMVQFTAHYGPVYTCDWHPTRNWL-ATGSRDKQIKVWNMDGR--PGLEHTIHTIAVVGRV 246
Query: 243 KFSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
K+ P R +ASC+ D +V +WD ++ HT G+ L S
Sbjct: 247 KWRPERTYHIASCALVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSHCLLSIS 306
Query: 301 WDELVY 306
D +Y
Sbjct: 307 KDSTIY 312
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/231 (25%), Positives = 99/231 (42%)
Query: 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT 95
NG V V DLS LV + + + + S ++LI+ DG++K +D +
Sbjct: 87 NGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKS 146
Query: 96 ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEHAYCVYN 154
N E R+V ++P ++ F S + TV+LW + + + F H VY
Sbjct: 147 INTYFCNSESVRDVK---FSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYT 203
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVR-EMGSTMIIPAHEFEILA-CDWNKYDDCLIASAS 212
W+P + + + S D +++W++ G I H ++ W IAS +
Sbjct: 204 CDWHPTRNWL-ATGSRDKQIKVWNMDGRPGLEHTI--HTIAVVGRVKWRPERTYHIASCA 260
Query: 213 --VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTV 261
VD S+ +WD+R +P A N H + + + L S S D T+
Sbjct: 261 LVVDYSVHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSHCLLSISKDSTI 311
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 149 AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG---STMIIPAHEFEILACDWNKYDD 205
+Y + W+ S++ +A+ + + +WD+ + G ++ HE ++ +
Sbjct: 65 SYSANDVAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEP 124
Query: 206 CLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++ S S D +IK +D+R+ + I + +VR VKFSPH +N+ ++ S + TV LWD
Sbjct: 125 NILISGSQDGTIKCFDIRSDK-SINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWD 183
Query: 266 FMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDPR 315
D + ++ H D LA+ D+ + VW MD R
Sbjct: 184 MRKWDKCMVQFTAHYGPVYTCDWHP-TRNWLATGSRDKQIKVWN--MDGR 230
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 248 (92.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 70/220 (31%), Positives = 108/220 (49%)
Query: 97 NPI--RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
+PI RS H + SAD++P + T+SWD + LW++ + H V +
Sbjct: 7 DPILERSFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P+ ++ SAS D T+R+W + G + AH + + D++ D L+ +AS D
Sbjct: 66 LQFSPQ-GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSA-DGQLLVTASED 123
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
KSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD V
Sbjct: 124 KSIKVWSMFRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQCVN 180
Query: 275 RYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVWQQGMD 313
+ FA VD + G +AS G D V +W M+
Sbjct: 181 NFSDSVGFANFVDFNP--NGTCIASAGSDHAVKIWDIRMN 218
Score = 186 (70.5 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 69/249 (27%), Positives = 113/249 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V L +S +LL +A D +V+++ ++ ++ HT V S D++ +
Sbjct: 61 DVVTSLQFSPQ-GNLLASASRDRTVRLWVLDRKGKSSEFKA---HTAPVRSVDFSADGQ- 115
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+T+S D ++K+W++ R + + H + V A ++P + S S D T++IWD
Sbjct: 116 LLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTT 174
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
D+N C IASA D ++KIWD+R ++ + H V
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNGTC-IASAGSDHAVKIWDIRMNKL-LQHYQVHSCGVN 232
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D TV + D ++E L+ HT V S E LL S G
Sbjct: 233 CLSFHP-LGNSLVTASSDGTVKMLD-LIEGRLIYTLQGHTGPVFTVSFSKDGE-LLTSGG 289
Query: 301 WDELVYVWQ 309
D V +W+
Sbjct: 290 ADAQVLIWR 298
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 91 ALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY 150
+L P A R + H V S ++P + + ++S D TV+LW +DR FK H
Sbjct: 46 SLKPHARAYRYVG-HKDVVTSLQFSP-QGNLLASASRDRTVRLWVLDRKGKSSEFKAHTA 103
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
V + ++ + +AS D ++++W + + H + ++ D LI S
Sbjct: 104 PVRSVDFSA-DGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP-DGRLIVS 161
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270
S DK+IKIWD N + + G+A V F+P+ +AS D V +WD + +
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDSVGFA-NFVDFNPNG-TCIASAGSDHAVKIWDIRM-N 218
Query: 271 ALVGRYDHHT 280
L+ Y H+
Sbjct: 219 KLLQHYQVHS 228
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/174 (24%), Positives = 81/174 (46%)
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195
++ P R+FK H + +A ++P + +AS D L +W ++ H+ +
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQI-ATASWDTFLMLWSLKPHARAYRYVGHKDVV 63
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASC 255
+ ++ + L+ASAS D+++++W V + + + H VR V FS + LL +
Sbjct: 64 TSLQFSPQGN-LLASASRDRTVRLW-VLDRKGKSSEFKAHTAPVRSVDFSADGQ-LLVTA 120
Query: 256 SYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
S D ++ +W + L Y HT + S +G L+ S D+ + +W
Sbjct: 121 SEDKSIKVWSMFRQRFLYSLY-RHTHWVRCAKFSP--DGRLIVSCSEDKTIKIW 171
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 246 (91.7 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 63/240 (26%), Positives = 110/240 (45%)
Query: 70 ESHDSLLIAAVADGSVKIYDTA---LPPT----ANPIRSLHEHTREVHSADYNPTRRDSF 122
++H S++ V I+DT L PT +P L H +E + +NP +
Sbjct: 132 QNH-SIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHL 190
Query: 123 ITSSWDDTVKLWTVDRPT-------SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLR 175
++ S D ++ +W + + ++ + H V + W+ H F S D L
Sbjct: 191 LSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLM 250
Query: 176 IWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
IWD R + ++ AH E+ +N + + L+A+ S DK++ +WD+RN + L
Sbjct: 251 IWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLIS 310
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG 294
H V +V+FSPH +LASC D V +WD + +G ++ + A G + + G
Sbjct: 311 HTDEVFQVQFSPHNETVLASCGSDRRVNVWDL----SRIGEEQNNEDAADGPPELLFIHG 366
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 127 WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM 186
WD + + ++ + H V + W+ H F S D L IWD R +
Sbjct: 202 WDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPI 261
Query: 187 -IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ AH E+ +N + + L+A+ S DK++ +WD+RN + L H V +V+FS
Sbjct: 262 HVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFS 321
Query: 246 PHRRNLLASCSYDMTVCLWDFMV-------EDALVGR----YDH--HTEFAVGVDMSVLV 292
PH +LASC D V +WD EDA G + H HT +
Sbjct: 322 PHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPND 381
Query: 293 EGLLASTGWDELVYVWQ 309
+AS D ++ +WQ
Sbjct: 382 PWSIASVAEDNILQIWQ 398
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 52/163 (31%), Positives = 70/163 (42%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVR---EMGSTM----IIPAHEFEILACDWNKYDD 205
Y +WNPR S S D ++ +WD+ + ST+ I H + W+ D
Sbjct: 178 YGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHD 237
Query: 206 CLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S DK + IWD R PI V+ H V + F+P L+A+ S D TV LWD
Sbjct: 238 TFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWD 297
Query: 266 FMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT+ V S E +LAS G D V VW
Sbjct: 298 MRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVW 340
Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 45/175 (25%), Positives = 70/175 (40%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW HD+ + D + I+DT PI + H EV+ +NP
Sbjct: 227 VEDVAWHYIHDTFFGSVGDDKKLMIWDTRTG--TKPIHVVEAHNSEVNCLSFNPFCEFLV 284
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + + H V+ ++P + V S D + +WD+
Sbjct: 285 ATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSR 344
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN D IAS + D ++IW +
Sbjct: 345 IGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQM 399
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/213 (20%), Positives = 93/213 (43%)
Query: 17 PFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLL 76
P S +A T + + + H L+ +P L Y ++W+ + L
Sbjct: 131 PQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHL 190
Query: 77 IAAVADGSVKIYDTALPP----TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
++ D S+ ++D + T + + + HT V ++ D+F S DD +
Sbjct: 191 LSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIH-DTFFGSVGDDKKL 249
Query: 132 KLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+W T + + H V ++NP + + S D T+ +WD+R +G+ + +
Sbjct: 250 MIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLI 309
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+H E+ ++ +++ ++AS D+ + +WD+
Sbjct: 310 SHTDEVFQVQFSPHNETVLASCGSDRRVNVWDL 342
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 246 (91.7 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 64/191 (33%), Positives = 92/191 (48%)
Query: 88 YDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRP--TSVRT- 144
+D A P L HT E +NP + T + D + LW V TS T
Sbjct: 164 HDALTTGEALPQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETK 223
Query: 145 -------FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR---EMGSTMIIPAHEFE 194
+ H V + ++P+H + S S DCTL+I D R E + +I AH
Sbjct: 224 VISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKA 283
Query: 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254
I A N ++D L+A+AS DK++ +WD+RN + L GH V +++SPH +LAS
Sbjct: 284 INAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILAS 343
Query: 255 CSYDMTVCLWD 265
S D VC+WD
Sbjct: 344 SSTDRRVCIWD 354
Score = 167 (63.8 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 54/231 (23%), Positives = 109/231 (47%)
Query: 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYD-------TALPPTANPIRSLHEHTREVHS 111
TA+G + L W+ + L D + ++D ++ +PI H HT V+
Sbjct: 182 TAEG-FGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVND 240
Query: 112 ADYNPTRRDSFITSSWDD-TVKLW-TVDRPT--SVRTFKEHAYCVYNATWNPRHSDVFCS 167
++P + ++ + S DD T+++ T P + + + H+ + NP + + +
Sbjct: 241 VQFHP-QHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLAT 299
Query: 168 ASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY- 225
AS D T+ +WD+R + + HE E+ +W+ +D+ ++AS+S D+ + IWD+
Sbjct: 300 ASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIG 359
Query: 226 --RVPIAVLNG-------HGYAVRKV-KFS--PHRRNLLASCSYDMTVCLW 264
+ P +G HG ++ +FS P+ R ++ S + D + +W
Sbjct: 360 EEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIW 410
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/176 (27%), Positives = 75/176 (42%)
Query: 146 KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST-----MIIPA---HEFEILA 197
K H + WNP + + D + +WDV+ T +I P H +
Sbjct: 179 KGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIV 238
Query: 198 CD--WNKYDDCLIASASVDKSIKIWDVR---NYRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
D ++ + L+AS S D +++I D R P V+ H A+ V +P LL
Sbjct: 239 NDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAP-KVIQAHSKAINAVAINPFNDYLL 297
Query: 253 ASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
A+ S D TV LWD + + H + G++ S E +LAS+ D V +W
Sbjct: 298 ATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIW 353
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 239 (89.2 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 70/229 (30%), Positives = 115/229 (50%)
Query: 81 ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT 140
AD +VKI++ + + R+L H V+ ++ + S +T+S D T+K++ V
Sbjct: 99 ADKTVKIWNMS---DLSCERTLTGHKLGVNDFAWSADSK-SIVTASDDKTLKIYEVPTVK 154
Query: 141 SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW 200
+T K H V+ +NP+ S + S S D ++RIWDVR +PAH + A +
Sbjct: 155 MAKTLKGHTNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSF 213
Query: 201 NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMT 260
N+ D LI S S D ++IWD N + +++ V VKFSP+ + +L+S + D T
Sbjct: 214 NR-DGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSS-NLDNT 271
Query: 261 VCLWDFMVEDALVGRYDH-HTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ LWDF L H + ++ + + SV + S D +YVW
Sbjct: 272 LKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW 320
Score = 209 (78.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/227 (29%), Positives = 108/227 (47%)
Query: 46 PAAPALTELVAFDT--ADGVYDLAWSE-SHDSLLIAAVADGSVKI--YDTALPPTANPIR 100
PAAPA+ E + A+ A S S + I AV + + ++ +P +
Sbjct: 13 PAAPAVEEAQGVNNSEAEAPAPAALSSVSPANPPITAVPEATAPTTSQESTIPGAGYKLI 72
Query: 101 SLHE-HTREVHSADYNPTRRDSFI-TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWN 158
S E HT+ + + ++P + F+ TSS D TVK+W + + RT H V + W+
Sbjct: 73 STIEGHTKSISAVKFSPCGK--FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS 130
Query: 159 PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218
+ +AS D TL+I++V + + H + C++N L+ S S D+S++
Sbjct: 131 ADSKSIV-TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSS-LVVSGSFDESVR 188
Query: 219 IWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
IWDVR + + L H V V F+ +L+ S SYD V +WD
Sbjct: 189 IWDVRT-GMCVKTLPAHSDPVSAVSFN-RDGSLITSGSYDGLVRIWD 233
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/153 (24%), Positives = 78/153 (50%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSL-HEHTREVHSADYNPTRRDSFITSSWDDTVK 132
SL+ + DG V+I+DTA +++L + V ++P + ++S+ D+T+K
Sbjct: 218 SLITSGSYDGLVRIWDTA---NGQCVKTLVDDENPPVAFVKFSPNGK-YILSSNLDNTLK 273
Query: 133 LWTVDRPTSVRTFKEHA---YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
LW + +++ ++ H YC++ A ++ S S DC + +W+++ +
Sbjct: 274 LWDFGKGKTLKQYQGHENNKYCIF-ANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLE 332
Query: 190 AHEFEILACDWNKYDDCLIASASV--DKSIKIW 220
H ++A D + + +IAS ++ D +I+IW
Sbjct: 333 GHTQAVIASDCHPMQN-MIASGALEPDNTIRIW 364
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 242 (90.2 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 69/220 (31%), Positives = 107/220 (48%)
Query: 97 NPI--RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
+PI R H + SAD++P + T+SWD + LW++ + H V +
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P+ ++ SAS D T+R+W + G + AH + + D++ D + +AS D
Sbjct: 66 LQFSPQ-GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSA-DGQFLVTASED 123
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
KSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD + V
Sbjct: 124 KSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWDTTSKQC-VN 180
Query: 275 RYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVWQQGMD 313
+ FA VD S G +AS G D V +W M+
Sbjct: 181 NFSDSVGFANFVDFSP--NGTCIASAGSDHAVRIWDIRMN 218
Score = 160 (61.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 52/190 (27%), Positives = 87/190 (45%)
Query: 91 ALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY 150
+L P A R + H V S ++P + + ++S D TV+LW +DR FK H
Sbjct: 46 SLKPHARAYRYVG-HKDVVTSLQFSP-QGNLLASASRDKTVRLWVLDRKGKSSEFKAHTA 103
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
V + ++ +AS D ++++W + + H + ++ D LI S
Sbjct: 104 PVRSVDFSA-DGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVS 161
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270
S DK+IKIWD + + + G+A V FSP+ +AS D V +WD + +
Sbjct: 162 CSEDKTIKIWDTTSKQCVNNFSDSVGFA-NFVDFSPNG-TCIASAGSDHAVRIWDIRM-N 218
Query: 271 ALVGRYDHHT 280
L+ Y H+
Sbjct: 219 RLLQHYQVHS 228
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 251 (93.4 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 82/253 (32%), Positives = 124/253 (49%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADG-SVKIYDTALPPTANPIRSLHEHTREVHSADYNP 116
D D V +A S +HDS +A+ +DG +VKI+DT N + H V+S ++P
Sbjct: 387 DHEDSV--MAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEG---HDDCVNSVSFSP 441
Query: 117 TRRDSFITSSWDD-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLR 175
R + S+ DD TVK+W + RT + H V + ++ S + SAS D T++
Sbjct: 442 DSR--LLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS-HDSRLIASASDDMTVK 498
Query: 176 IWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH 235
IWD + + +H+ + + ++ +D L+ASAS D ++KIWD + L GH
Sbjct: 499 IWDTATVPLQNNLESHDNWVRSVVFS-HDSRLLASASDDMTVKIWDTATGSLE-NTLEGH 556
Query: 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL 295
V V FSP R LLAS S D TV +W + + +D A+ + S L
Sbjct: 557 DDRVNSVSFSPDSR-LLASASDDGTVKIW-YAATGTVQHTFDGSGRVAISLAFSH-TSNL 613
Query: 296 LASTGWDELVYVW 308
LAS D V +W
Sbjct: 614 LASAMDDGTVKIW 626
Score = 250 (93.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 84/248 (33%), Positives = 116/248 (46%)
Query: 69 SESHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW 127
S SHDS L+A+ + DG+VKI+DTA N +L H V S ++ R + S+
Sbjct: 270 SFSHDSRLLASASGDGTVKIWDTATSFLQN---TLEGHNEWVKSVVFSHDSR--LLASAS 324
Query: 128 DD-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM 186
DD TVK+W T R K H V + ++ S + S S D T+RIW+
Sbjct: 325 DDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWETTTGLLRH 383
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
HE ++A + +D +ASAS ++KIWD R + VL GH V V FSP
Sbjct: 384 TFEDHEDSVMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQ-NVLEGHDDCVNSVSFSP 441
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVY 306
R LLAS S D TV +W +L + H ++ V S L+AS D V
Sbjct: 442 DSR-LLASASDDRTVKIWH-AATGSLQRTLEGHNDWVRSVVFSH-DSRLIASASDDMTVK 498
Query: 307 VWQQGMDP 314
+W P
Sbjct: 499 IWDTATVP 506
Score = 226 (84.6 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 81/243 (33%), Positives = 120/243 (49%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIR-SLHEHTREVHSADY-NPTRRDSFITSSW 127
SHDS LIA+ + D +V+I++T T +R + +H V + + + +RR ++S
Sbjct: 356 SHDSRLIASGSNDRTVRIWET----TTGLLRHTFEDHEDSVMAVSFAHDSRR--LASASD 409
Query: 128 DDTVKLWTVDRPTSVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM 186
VK+W R S++ E H CV + +++P S + SAS D T++IW
Sbjct: 410 GGNVKIWDT-RTGSLQNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQR 467
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV-LNGHGYAVRKVKFS 245
+ H + + ++ +D LIASAS D ++KIWD VP+ L H VR V FS
Sbjct: 468 TLEGHNDWVRSVVFS-HDSRLIASASDDMTVKIWDTAT--VPLQNNLESHDNWVRSVVFS 524
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELV 305
H LLAS S DMTV +WD +L + H + V S LLAS D V
Sbjct: 525 -HDSRLLASASDDMTVKIWD-TATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTV 581
Query: 306 YVW 308
+W
Sbjct: 582 KIW 584
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 64/202 (31%), Positives = 95/202 (47%)
Query: 69 SESHDSLLIAAVADG-SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW 127
S S DS L+A+ +D +VKI+ A T + R+L H V S ++ R I S+
Sbjct: 438 SFSPDSRLLASASDDRTVKIWHAA---TGSLQRTLEGHNDWVRSVVFSHDSR--LIASAS 492
Query: 128 DD-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM 186
DD TVK+W + H V + ++ S + SAS D T++IWD
Sbjct: 493 DDMTVKIWDTATVPLQNNLESHDNWVRSVVFS-HDSRLLASASDDMTVKIWDTATGSLEN 551
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H+ + + ++ D L+ASAS D ++KIW V +G G + FS
Sbjct: 552 TLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYAATGTVQ-HTFDGSGRVAISLAFS- 608
Query: 247 HRRNLLASCSYDMTVCLWDFMV 268
H NLLAS D TV +WD +
Sbjct: 609 HTSNLLASAMDDGTVKIWDMEI 630
Score = 158 (60.7 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 57/190 (30%), Positives = 94/190 (49%)
Query: 71 SHDSLLIAAVADG-SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
SHDS LIA+ +D +VKI+DTA P N +L H V S ++ R + S+ DD
Sbjct: 482 SHDSRLIASASDDMTVKIWDTATVPLQN---NLESHDNWVRSVVFSHDSR--LLASASDD 536
Query: 130 -TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII 188
TVK+W + T + H V + +++P S + SAS D T++IW +T +
Sbjct: 537 MTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIW----YAATGTV 591
Query: 189 PAHEFE---ILACDWN-KYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244
H F+ +A + L+ASA D ++KIWD+ Y + H +++++F
Sbjct: 592 Q-HTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDH--EIQRIQF 648
Query: 245 SPHRRNLLAS 254
+L+ +
Sbjct: 649 DKSMSSLITN 658
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 236 (88.1 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 59/187 (31%), Positives = 98/187 (52%)
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
++ S D T+K+W + S++T K H+ V+ +NP+ S++ S S D ++RIWDVR
Sbjct: 130 VSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTG 188
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
+PAH + A +N+ D LI S+S D +IWD + + +++ V V
Sbjct: 189 KCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE-FAVGVDMSVLVEGLLASTGW 301
KFSP+ + +LA+ + D T+ LWD+ L H E + + + SV + S
Sbjct: 248 KFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 306
Query: 302 DELVYVW 308
D +VY+W
Sbjct: 307 DNMVYIW 313
Score = 188 (71.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 56/208 (26%), Positives = 93/208 (44%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V + ++P + +SS D +K+W +T H + + W+
Sbjct: 67 TLAGHTKAVSAVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 124
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S + S S D TL++W++ S + H + C++N + LI S S D+S++IW
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 183
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DVR + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 184 DVRTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 241
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 242 PPVSFVKFSPNGKYILAAT-LDNTLKLW 268
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/152 (23%), Positives = 75/152 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
SL++++ DG +I+DTA + + + V ++P + + ++ D+T+KL
Sbjct: 211 SLIVSSSYDGLCRIWDTASGQCLKTL--IDDDNPPVSFVKFSPNGK-YILAATLDNTLKL 267
Query: 134 WTVDRPTSVRTFKEHA---YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
W + ++T+ H YC++ A ++ S S D + IW+++ +
Sbjct: 268 WDYSKGKCLKTYTGHKNEKYCIF-ANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQG 326
Query: 191 HEFEILACDWNKYDDCLIASASV--DKSIKIW 220
H +L + ++ +IASA++ DK+IK+W
Sbjct: 327 HTDTVLCTACHPTEN-IIASAALENDKTIKLW 357
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 243 (90.6 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 79/244 (32%), Positives = 118/244 (48%)
Query: 66 LAWSESHDSLLIAAVADG-SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
L+ S SHDS L+A+ +D +VKI+DT T + +L H+ V S ++ R +
Sbjct: 300 LSVSYSHDSRLLASASDDRTVKIWDTE---TGSLQHTLEGHSDLVRSVIFSHDSR--LLA 354
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S+ D TVK+W + T + H V + ++ S + SAS D T++IWD
Sbjct: 355 SASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSL 413
Query: 185 TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244
+ H + + ++ +D L+ASAS D ++KIWD + L GH VR V F
Sbjct: 414 QHTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIF 471
Query: 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDEL 304
S H LLAS S D TV +WD + + + H+ V S LLAS D+
Sbjct: 472 S-HDSRLLASASDDRTVRIWD-TEKGSHKHTLEGHSSLVTSVSFSH-DSRLLASASNDQT 528
Query: 305 VYVW 308
V +W
Sbjct: 529 VRIW 532
Score = 234 (87.4 bits), Expect = 9.2e-19, P = 9.2e-19
Identities = 72/211 (34%), Positives = 105/211 (49%)
Query: 59 TADGVYDLAWSE--SHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNP 116
T +G DL S SHDS L+A+ +D +VKI+DT T + +L H V S ++
Sbjct: 333 TLEGHSDLVRSVIFSHDSRLLASASDSTVKIWDTG---TGSLQHTLEGHRDWVRSVIFS- 388
Query: 117 TRRDS-FITSSWDD-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTL 174
DS + S+ DD TVK+W + T + H V + ++ S + SAS D T+
Sbjct: 389 --HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQLLASASDDSTV 445
Query: 175 RIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+IWD + H + + ++ +D L+ASAS D++++IWD L G
Sbjct: 446 KIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSHK-HTLEG 503
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
H V V FS H LLAS S D TV +WD
Sbjct: 504 HSSLVTSVSFS-HDSRLLASASNDQTVRIWD 533
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/155 (32%), Positives = 82/155 (52%)
Query: 71 SHDSLLIAAVADGS-VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS-FITSSWD 128
SHDS L+A+ +D S VKI+DT T + +L H V S ++ DS + S+ D
Sbjct: 388 SHDSQLLASASDDSTVKIWDTG---TGSLQHTLEGHRDWVRSVIFS---HDSQLLASASD 441
Query: 129 D-TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
D TVK+W + T + H V + ++ S + SAS D T+RIWD +
Sbjct: 442 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSHKHT 500
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ H + + ++ +D L+ASAS D++++IWD+
Sbjct: 501 LEGHSSLVTSVSFS-HDSRLLASASNDQTVRIWDI 534
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 57/171 (33%), Positives = 84/171 (49%)
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDW 200
++ + H V + +++ S + SAS D T++IWD E GS + H + + +
Sbjct: 289 LQALEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDT-ETGSLQHTLEGHSDLVRSVIF 346
Query: 201 NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMT 260
+ +D L+ASAS D ++KIWD + L GH VR V FS H LLAS S D T
Sbjct: 347 S-HDSRLLASAS-DSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFS-HDSQLLASASDDST 402
Query: 261 VCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQG 311
V +WD +L + H ++ V S + LLAS D V +W G
Sbjct: 403 VKIWDTGT-GSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTG 451
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 240 (89.5 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 69/217 (31%), Positives = 102/217 (47%)
Query: 95 TANPI--RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152
T +P+ R H + S D +P + T+SWD + LW + H V
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQ-LATASWDTFLMLWNFKPHARAYRYVGHKDVV 63
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212
+ ++P H ++ SAS D T+R+W + G AH + + D++ D +A+AS
Sbjct: 64 TSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQFLATAS 121
Query: 213 VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL 272
DKSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD
Sbjct: 122 EDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQC 178
Query: 273 VGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
V + FA VD + G +AS G D+ V VW
Sbjct: 179 VNNFSDSVGFANFVDFNP--SGTCIASAGSDQTVKVW 213
Score = 199 (75.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWDDT 130
H +LL +A D +V+++ +P HT V S D++ + F+ T+S D +
Sbjct: 71 HGNLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQ--FLATASEDKS 125
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
+K+W++ R + + H + V A ++P + S S D T++IWD
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
D+N C IASA D+++K+WDVR ++ + H V + F P N
Sbjct: 185 SVGFANFVDFNPSGTC-IASAGSDQTVKVWDVRVNKL-LQHYQVHSGGVNCISFHPSD-N 241
Query: 251 LLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310
L + S D T+ + D ++E L+ HT V S E L AS G D V +W+
Sbjct: 242 YLVTASSDGTLKILD-LLEGRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRT 299
Query: 311 GMD 313
D
Sbjct: 300 NFD 302
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/176 (27%), Positives = 79/176 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
H V S ++P + ++S D TV+LW D+ FK H V + ++
Sbjct: 59 HKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQF 116
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
+AS D ++++W + + H + ++ D LI S S DK+IKIWD N
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTN 175
Query: 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
+ + G+A V F+P +AS D TV +WD V + L+ Y H+
Sbjct: 176 KQCVNNFSDSVGFA-NFVDFNPSG-TCIASAGSDQTVKVWDVRV-NKLLQHYQVHS 228
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 240 (89.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 69/217 (31%), Positives = 102/217 (47%)
Query: 95 TANPI--RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152
T +P+ R H + S D +P + T+SWD + LW + H V
Sbjct: 5 TEDPVLERYFKGHKAAITSLDLSPNGKQ-LATASWDTFLMLWNFKPHARAYRYVGHKDVV 63
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212
+ ++P H ++ SAS D T+R+W + G AH + + D++ D +A+AS
Sbjct: 64 TSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQFLATAS 121
Query: 213 VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL 272
DKSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD
Sbjct: 122 EDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQC 178
Query: 273 VGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
V + FA VD + G +AS G D+ V VW
Sbjct: 179 VNNFSDSVGFANFVDFNP--SGTCIASAGSDQTVKVW 213
Score = 198 (74.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWDDT 130
H +LL +A D +V+++ +P HT V S D++ + F+ T+S D +
Sbjct: 71 HGNLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQ--FLATASEDKS 125
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
+K+W++ R + + H + V A ++P + S S D T++IWD
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
D+N C IASA D+++K+WDVR ++ + H V + F P N
Sbjct: 185 SVGFANFVDFNPSGTC-IASAGSDQTVKVWDVRVNKL-LQHYQVHSGGVNCISFHPSG-N 241
Query: 251 LLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310
L + S D T+ + D ++E L+ HT V S E L AS G D V +W+
Sbjct: 242 YLITASSDGTLKILD-LLEGRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRT 299
Query: 311 GMD 313
D
Sbjct: 300 NFD 302
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/176 (27%), Positives = 79/176 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
H V S ++P + ++S D TV+LW D+ FK H V + ++
Sbjct: 59 HKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQF 116
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
+AS D ++++W + + H + ++ D LI S S DK+IKIWD N
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTN 175
Query: 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
+ + G+A V F+P +AS D TV +WD V + L+ Y H+
Sbjct: 176 KQCVNNFSDSVGFA-NFVDFNPSG-TCIASAGSDQTVKVWDVRV-NKLLQHYQVHS 228
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 55/228 (24%), Positives = 110/228 (48%)
Query: 50 ALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYD--TALPPTANPIRSLHEHTR 107
A+ + + D + WS++ S+ I +A+ +K D T P P+ ++ H+
Sbjct: 195 AVNRIRSMDQQSNIV-ATWSDNR-SVYIWNIAN-HLKALDNETVAPKQTAPLHTISNHSI 251
Query: 108 EVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT---SVRTFKEHAYCVYNATWNPRHSDV 164
E ++ D++P T ++++ + T + FK H V + W+P V
Sbjct: 252 EGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKV 311
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
F S S D T+RIWD+R+ + + AH ++ W++ + L+ S D S ++WD+R
Sbjct: 312 FASCSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRA 371
Query: 225 YR--VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270
++ P++ H + ++++P+ + + S D V +WDF +E+
Sbjct: 372 FKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEE 419
Score = 141 (54.7 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 39/179 (21%), Positives = 78/179 (43%)
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST-----MIIPAHEFEIL 196
+ T H+ Y W+P+ + A+GDC I+ ST H +
Sbjct: 243 LHTISNHSIEGYALDWSPKIAGRL--ATGDCNNSIFVTNASESTWKTDTQAFKGHTESVE 300
Query: 197 ACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS 256
W+ ++ + AS S+D++++IWD+R + P + H V + +S + LL S
Sbjct: 301 DIQWSPSEEKVFASCSIDQTVRIWDIRKPK-PAITVKAHTADVNVISWSRNVEYLLVSGC 359
Query: 257 YDMTVCLWDFMV--EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 313
D + +WD +++ V + +HT ++ + E + + D+ V +W ++
Sbjct: 360 DDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLE 418
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/174 (25%), Positives = 78/174 (44%)
Query: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDT-ADGVYDLAW 68
GY++ +SP RLA N + V + S + T+ AF + V D+ W
Sbjct: 253 GYALDWSPKIAGRLATGDCNN-------SIFVTNASESTWK-TDTQAFKGHTESVEDIQW 304
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD 128
S S + + + D +V+I+D P A +++ HT +V+ ++ ++ D
Sbjct: 305 SPSEEKVFASCSIDQTVRIWDIRKPKPAITVKA---HTADVNVISWSRNVEYLLVSGCDD 361
Query: 129 DTVKLWTVD--RPTS-VRTFKEHAYCVYNATWNP-RHSDVFCSASGDCTLRIWD 178
+ ++W + + S V FK H + + WNP S V S+S D + IWD
Sbjct: 362 GSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDD-QVTIWD 414
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 239 (89.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 71/222 (31%), Positives = 110/222 (49%)
Query: 92 LPPTANPI--RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE-- 147
LP +P+ R H + S D++P+ + T+SWD + LW +P + R F+
Sbjct: 2 LPFQEDPVLERYFKGHKAAITSVDFSPSGKQ-LATASWDTFLMLWNC-KPQA-RAFRYVG 58
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H V + ++P ++ SAS D T+R+W + G + AH + + D++ D
Sbjct: 59 HKDVVTSVQFSPL-GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSA-DGQF 116
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+A+AS DKSIK+W++ R + L H + VR KFSP R L+ SCS D T+ +WD
Sbjct: 117 LATASEDKSIKVWNMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-T 173
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
V + FA VD + G +AS G D V +W
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNP--NGTCIASAGSDHTVKIW 213
Score = 182 (69.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWDDTVK 132
+LL +A D +V+++ +P HT V S D++ + F+ T+S D ++K
Sbjct: 73 NLLASASRDRTVRLW---IPDKRGKSSEFKAHTAPVRSVDFSADGQ--FLATASEDKSIK 127
Query: 133 LWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE 192
+W + R + + H + V A ++P + S S D T++IWD
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Query: 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
D+N C IASA D ++KIWD+R ++ + H V V F P N +
Sbjct: 187 GFANFVDFNPNGTC-IASAGSDHTVKIWDIRVNKL-LQHYQVHSGGVNCVSFHPSG-NYI 243
Query: 253 ASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312
+ S D T+ + D ++E L+ HT V S E L +S G D V +W+
Sbjct: 244 ITASSDGTLKILD-LLEGRLIYTLQGHTGPVFTVSFSKGGE-LFSSGGADTQVLLWRTNF 301
Query: 313 D 313
D
Sbjct: 302 D 302
Score = 160 (61.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 52/187 (27%), Positives = 85/187 (45%)
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVY 153
P A R + H V S ++P + ++S D TV+LW D+ FK H V
Sbjct: 49 PQARAFRYVG-HKDVVTSVQFSPLG-NLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVR 106
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
+ ++ +AS D ++++W++ + H + ++ D LI S S
Sbjct: 107 SVDFSA-DGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSE 164
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
DK+IKIWD N + + G+A V F+P+ +AS D TV +WD V + L+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFA-NFVDFNPNG-TCIASAGSDHTVKIWDIRV-NKLL 221
Query: 274 GRYDHHT 280
Y H+
Sbjct: 222 QHYQVHS 228
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP + +++S D T+ LW + + +T F H
Sbjct: 168 NPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP + +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 50/179 (27%), Positives = 89/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP + +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 246 (91.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 80/262 (30%), Positives = 127/262 (48%)
Query: 49 PALTELV-AFDTADG-VYDLAWSESHDSLLIAAVAD-GSVKIYDTALPPTANPIRSLHEH 105
PA EL + + G V +A+S D +A+ ++ +VK+++ P T +++L H
Sbjct: 905 PATGELQQSLEGRSGWVKSVAFSP--DGKKLASGSEKNTVKLWN---PATGELLQTLEGH 959
Query: 106 TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165
++ V S ++P + +SS D T+KLW +TFK H + ++P +
Sbjct: 960 SQSVRSVAFSPDGKQ-LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLV 1018
Query: 166 CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY 225
S S D T+++WD+ + H + A ++ DD +AS+S+D +IK+WD
Sbjct: 1019 -SGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP-DDKQLASSSLDSTIKLWDSATG 1076
Query: 226 RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM---VEDALVGRYDHHTEF 282
+ L GH VR V FSP + LLAS SYD T+ LW+ + ++ L GR D
Sbjct: 1077 ELQ-RTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSV 1134
Query: 283 AVGVDMSVLVEGLLASTG--WD 302
A D L G ST WD
Sbjct: 1135 AFSPDGKQLASGYYDSTIKLWD 1156
Score = 242 (90.2 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 71/236 (30%), Positives = 122/236 (51%)
Query: 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135
L++ D ++K++D A T+ +SL +H+R VH+ ++P + +SS D T+KLW
Sbjct: 1017 LVSGSDDNTIKLWDLA---TSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWD 1072
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD--VREMGSTMIIPAHEF 193
RT + H+ V + T++P + S S D T+++W+ E+ T+ +
Sbjct: 1073 SATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV 1131
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+ +A D +AS D +IK+WD + + L GH ++ V FSP + LLA
Sbjct: 1132 DSVAFS---PDGKQLASGYYDSTIKLWDSATGEL-LQTLEGHSDRIQSVVFSPDGK-LLA 1186
Query: 254 SCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
S SYD T LWD + L+ ++ H+++ V S +G LLAS+ + E + +W
Sbjct: 1187 SGSYDQTAKLWDPATGE-LLQIFEGHSKWVESVAFSP--DGKLLASSSYGETIKLW 1239
Score = 217 (81.4 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 65/234 (27%), Positives = 119/234 (50%)
Query: 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135
L++ D +VKI+D P T +++L H+ V S ++P + + S+D+T+ LW
Sbjct: 765 LVSGSYDDTVKIWD---PATGELLQTLDGHSGTVESLAFSPDGK-LLASGSYDNTIDLWD 820
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195
++TF+ H + +++ + P ++ SAS D T++IWD+ + +H +
Sbjct: 821 SATGELLQTFEGHPHSIWSVAFAPDGKEL-ASASDDSTIKIWDLATGELQQTLDSHSQSV 879
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASC 255
+ ++ D L+AS+S+D +IK+W+ + + L G V+ V FSP + L AS
Sbjct: 880 RSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQS-LEGRSGWVKSVAFSPDGKKL-ASG 936
Query: 256 SYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
S TV LW+ + L+ + H++ V S +G LAS+ D + +W
Sbjct: 937 SEKNTVKLWNPATGE-LLQTLEGHSQSVRSVAFSP--DGKQLASSSSDTTIKLW 987
Score = 203 (76.5 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 59/208 (28%), Positives = 102/208 (49%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
D + V+ +A+S D L ++ D ++K++D+A T R+L H++ V S ++P
Sbjct: 1042 DHSRSVHAVAFSPD-DKQLASSSLDSTIKLWDSA---TGELQRTLEGHSQGVRSVTFSPD 1097
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+ ++S+D T+KLW +T + V + ++P + S D T+++W
Sbjct: 1098 GK-LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL-ASGYYDSTIKLW 1155
Query: 178 DVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGY 237
D + H I + ++ D L+AS S D++ K+WD + + + GH
Sbjct: 1156 DSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKLWDPATGEL-LQIFEGHSK 1213
Query: 238 AVRKVKFSPHRRNLLASCSYDMTVCLWD 265
V V FSP + LLAS SY T+ LWD
Sbjct: 1214 WVESVAFSPDGK-LLASSSYGETIKLWD 1240
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/198 (29%), Positives = 91/198 (45%)
Query: 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
++L H V S ++P + ++ S+DDTVK+W ++T H+ V + ++P
Sbjct: 744 QTLENHLGPVESVVFSPDGKQ-LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP 802
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ S S D T+ +WD H I + + D +ASAS D +IKI
Sbjct: 803 -DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP-DGKELASASDDSTIKI 860
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM---VEDALVGRY 276
WD+ + L+ H +VR V FSP + LLAS S D T+ +W+ ++ +L GR
Sbjct: 861 WDLATGELQ-QTLDSHSQSVRSVAFSPDGK-LLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 277 DHHTEFAVGVDMSVLVEG 294
A D L G
Sbjct: 919 GWVKSVAFSPDGKKLASG 936
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 57/221 (25%), Positives = 104/221 (47%)
Query: 49 PALTELVAFDTADG----VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE 104
PA EL+ T DG V LA+S LL + D ++ ++D+A T +++
Sbjct: 779 PATGELL--QTLDGHSGTVESLAFSPD-GKLLASGSYDNTIDLWDSA---TGELLQTFEG 832
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
H + S + P ++ ++S D T+K+W + +T H+ V + ++P +
Sbjct: 833 HPHSIWSVAFAPDGKE-LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP-DGKL 890
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
S+S D T+++W+ + + + ++ D +AS S ++K+W+
Sbjct: 891 LASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPAT 949
Query: 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+ + L GH +VR V FSP + L AS S D T+ LW+
Sbjct: 950 GEL-LQTLEGHSQSVRSVAFSPDGKQL-ASSSSDTTIKLWN 988
Score = 160 (61.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 54/197 (27%), Positives = 91/197 (46%)
Query: 117 TRRD-SFITSSWDDTVKL---WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
TRR ++ S W K+ W+ ++ +T + H V + ++P + S S D
Sbjct: 718 TRRIFNYNLSGWSQLPKVEQTWSAEQ----QTLENHLGPVESVVFSPDGKQLV-SGSYDD 772
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVL 232
T++IWD + H + + ++ D L+AS S D +I +WD + +
Sbjct: 773 TVKIWDPATGELLQTLDGHSGTVESLAFSP-DGKLLASGSYDNTIDLWDSATGEL-LQTF 830
Query: 233 NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292
GH +++ V F+P + L AS S D T+ +WD + L D H++ V S
Sbjct: 831 EGHPHSIWSVAFAPDGKEL-ASASDDSTIKIWDLATGE-LQQTLDSHSQSVRSVAFSP-- 886
Query: 293 EG-LLASTGWDELVYVW 308
+G LLAS+ D + VW
Sbjct: 887 DGKLLASSSLDSTIKVW 903
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 235 (87.8 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 133 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 192
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 193 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 252
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 253 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 311
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 195 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 254
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 255 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 314
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 315 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 369
Score = 184 (69.8 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 146 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 205
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 206 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 265
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 266 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 310
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 146 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 205
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 206 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 265
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 266 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 312
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 232 (86.7 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 67/236 (28%), Positives = 114/236 (48%)
Query: 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVKLW 134
L +A AD ++KI+ R+L H + +D ++ I S+ DD T+K+W
Sbjct: 61 LASASADKTIKIWGAY---DGKFERTLEGHKEGI--SDIAWSQDSKLICSASDDKTIKIW 115
Query: 135 TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFE 194
V+ V+T K H V+ ++NP+ S++ S S D +RIWDV T +I AH
Sbjct: 116 DVESGKMVKTLKGHKEYVFGVSFNPQ-SNLIVSGSFDENVRIWDVNTGECTKMISAHSDP 174
Query: 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254
+ +N+ D L+ S S D +++IWD ++ + G V VKFSP+ + +LA
Sbjct: 175 VTGVHFNR-DGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAG 233
Query: 255 CSYDMTVCLWDFMVEDALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ D T+ LW + + Y H ++ + SV + + D L+Y++
Sbjct: 234 -TLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Score = 166 (63.5 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 55/256 (21%), Positives = 111/256 (43%)
Query: 61 DGVYDLAWSESHDSLLIAAVADG-SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRR 119
+G+ D+AWS+ DS LI + +D ++KI+D + +++L H V +NP +
Sbjct: 89 EGISDIAWSQ--DSKLICSASDDKTIKIWDVE---SGKMVKTLKGHKEYVFGVSFNP-QS 142
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+ ++ S+D+ V++W V+ + H+ V +N R + S S D T+RIWD
Sbjct: 143 NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDT 201
Query: 180 REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG--- 236
I + + ++ + + + ++D ++++W N + + GH
Sbjct: 202 TTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEK 261
Query: 237 YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED---ALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + + S D + +++ + L G D A +++
Sbjct: 262 YCIFST-FSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIAS 320
Query: 294 GLLASTGWDELVYVWQ 309
G L D V +W+
Sbjct: 321 GALEK---DRSVKIWK 333
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
NP L H +E + +NP +++S D T+ LW + + +T F H
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/165 (29%), Positives = 75/165 (45%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREM---GSTM----IIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + G + I H + W+ +
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/167 (22%), Positives = 82/167 (49%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYD-TALPPTANPI--RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D +A+P + +++ HT V ++
Sbjct: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>UNIPROTKB|F1MJS7 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:DAAA02057282 IPI:IPI00713947 UniGene:Bt.720
ProteinModelPortal:F1MJS7 Ensembl:ENSBTAT00000025300 Uniprot:F1MJS7
Length = 790
Score = 239 (89.2 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 63/244 (25%), Positives = 108/244 (44%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G V ++ P + EH R V+ ++PT ++
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S D +K + + R SV TF + V + ++ R F S + +++WD+R
Sbjct: 139 GSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDR 198
Query: 185 T-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ AH + CDW+ D +A+ DK +K+WD+ +R +V +VK
Sbjct: 199 CERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMATHRAKEVHCVQTIASVARVK 258
Query: 244 FSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGV------DMSVLVEGL 295
+ P R+ LA+CS D V +WD ++ H + G+ D S L+ G
Sbjct: 259 WRPECRHHLATCSMMVDHNVYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGS 318
Query: 296 LAST 299
ST
Sbjct: 319 KDST 322
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 50/201 (24%), Positives = 87/201 (43%)
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF-ITSSW 127
+E+H +L++ DG +K +D + + E R+V + RD F S++
Sbjct: 131 TEAH--VLLSGSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSI-----RDYFTFASTF 183
Query: 128 DD-TVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
++ V+LW + RP R F H V+ W+P + D +++WD+ +
Sbjct: 184 ENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMATHRAK 243
Query: 186 MIIPAHEFEILA-CDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
+ +A W +A+ S VD ++ +WDVR VP A+ H +
Sbjct: 244 EVHCVQTIASVARVKWRPECRHHLATCSMMVDHNVYVWDVRRPFVPAAMFEEHRDVTTGI 303
Query: 243 KFS-PHRRNLLASCSYDMTVC 262
+ PH + L S S D T+C
Sbjct: 304 AWRHPHDPSFLLSGSKDSTLC 324
>UNIPROTKB|F1RG37 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
EMBL:FP016225 RefSeq:XP_003124754.1 Ensembl:ENSSSCT00000008775
GeneID:100510897 KEGG:ssc:100510897 Uniprot:F1RG37
Length = 790
Score = 238 (88.8 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 62/244 (25%), Positives = 108/244 (44%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G V ++ P + EH R V+ ++PT ++
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S D +K + + R SV TF + V + ++ R F S + +++WD+R
Sbjct: 139 GSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDR 198
Query: 185 T-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ AH + CDW+ D +A+ DK +K+WD+ +R +V +VK
Sbjct: 199 CERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAKEVHCVQTIASVARVK 258
Query: 244 FSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGV------DMSVLVEGL 295
+ P R+ LA+CS D + +WD ++ H + G+ D S L+ G
Sbjct: 259 WRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGS 318
Query: 296 LAST 299
ST
Sbjct: 319 KDST 322
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 51/201 (25%), Positives = 87/201 (43%)
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF-ITSSW 127
+E+H +L++ DG +K +D + + E R+V + RD F S++
Sbjct: 131 TEAH--VLLSGSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSI-----RDYFTFASTF 183
Query: 128 DD-TVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
++ V+LW + RP R F H V+ W+P + D +++WD+ +
Sbjct: 184 ENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAK 243
Query: 186 MIIPAHEFEILA-CDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
+ +A W +A+ S VD +I +WDVR VP A+ H +
Sbjct: 244 EVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGI 303
Query: 243 KFS-PHRRNLLASCSYDMTVC 262
+ PH + L S S D T+C
Sbjct: 304 AWRHPHDPSFLLSGSKDSTLC 324
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 233 (87.1 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 67/207 (32%), Positives = 103/207 (49%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE--HAYCVYNATWNPRHS 162
H + S D++P + T SWD + LW++ RP + R F+ H + + ++P
Sbjct: 17 HKAAITSVDFSPNGKQ-LATGSWDTFLMLWSL-RPQA-RAFRYVGHKDVITSVQFSPL-G 72
Query: 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
++ SAS D T+R+W + G + AH + + D++ D +ASAS DKSIK+W++
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSA-DGQFLASASEDKSIKVWNM 131
Query: 223 RNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF 282
R + L H + VR KFSP R L+ SCS D T+ +WD V + F
Sbjct: 132 YRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQCVNNFSDFVGF 188
Query: 283 AVGVDMSVLVEGL-LASTGWDELVYVW 308
A V + G +AS G D V +W
Sbjct: 189 ANFVAFNP--NGTCIASAGSDHTVKIW 213
Score = 161 (61.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 52/190 (27%), Positives = 87/190 (45%)
Query: 91 ALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY 150
+L P A R + H + S ++P + ++S D T++LW D+ FK H
Sbjct: 46 SLRPQARAFRYVG-HKDVITSVQFSPLG-NLLASASRDRTIRLWIPDKRGKSSEFKAHTA 103
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
V + ++ SAS D ++++W++ + H + ++ D LI S
Sbjct: 104 PVRSVDFSA-DGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVS 161
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270
S DK+IKIWD N + + G+A V F+P+ +AS D TV +WD V +
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDFVGFA-NFVAFNPNG-TCIASAGSDHTVKIWDIRV-N 218
Query: 271 ALVGRYDHHT 280
L+ Y H+
Sbjct: 219 KLLQHYQVHS 228
>MGI|MGI:2446285 [details] [associations]
symbol:Wdr24 "WD repeat domain 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005777
"peroxisome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2446285 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
HOGENOM:HOG000234392 HOVERGEN:HBG080644 OMA:HALYDSR
OrthoDB:EOG48WC1D EMBL:BC037651 IPI:IPI00229321 RefSeq:NP_776102.1
UniGene:Mm.95512 ProteinModelPortal:Q8CFJ9 SMR:Q8CFJ9
PhosphoSite:Q8CFJ9 PaxDb:Q8CFJ9 PRIDE:Q8CFJ9
Ensembl:ENSMUST00000026833 GeneID:268933 KEGG:mmu:268933
UCSC:uc008bcd.2 InParanoid:Q8CFJ9 NextBio:392587 Bgee:Q8CFJ9
CleanEx:MM_WDR24 Genevestigator:Q8CFJ9
GermOnline:ENSMUSG00000025737 Uniprot:Q8CFJ9
Length = 790
Score = 237 (88.5 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 62/244 (25%), Positives = 108/244 (44%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G V ++ P + EH R V+ ++PT ++
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S D +K + + R SV TF + V + ++ R F S + +++WD+R
Sbjct: 139 GSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDR 198
Query: 185 T-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ AH + CDW+ D +A+ DK +K+WD+ +R +V +VK
Sbjct: 199 CERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAKEIHCVQTIASVARVK 258
Query: 244 FSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGV------DMSVLVEGL 295
+ P R+ LA+CS D + +WD ++ H + G+ D S L+ G
Sbjct: 259 WRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGS 318
Query: 296 LAST 299
ST
Sbjct: 319 KDST 322
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF-ITSSW 127
+E+H +L++ DG +K +D + + E R+V + RD F S++
Sbjct: 131 TEAH--VLLSGSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSI-----RDYFTFASTF 183
Query: 128 DD-TVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
++ V+LW + RP R F H V+ W+P + D +++WD+ +
Sbjct: 184 ENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAK 243
Query: 186 MIIPAHEFEILA-CDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
I +A W +A+ S VD +I +WDVR VP A+ H +
Sbjct: 244 EIHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGI 303
Query: 243 KFS-PHRRNLLASCSYDMTVC 262
+ PH + L S S D T+C
Sbjct: 304 AWRHPHDPSFLLSGSKDSTLC 324
>UNIPROTKB|G3V8L0 [details] [associations]
symbol:Wdr24 "RCG32838" species:10116 "Rattus norvegicus"
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 EMBL:CH473948
GO:GO:0005053 PANTHER:PTHR22850:SF4 CTD:84219
GeneTree:ENSGT00650000093352 OMA:HALYDSR RefSeq:NP_001178013.1
UniGene:Rn.20330 ProteinModelPortal:G3V8L0
Ensembl:ENSRNOT00000026697 GeneID:360497 KEGG:rno:360497
RGD:1304803 NextBio:672978 Uniprot:G3V8L0
Length = 790
Score = 237 (88.5 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 62/244 (25%), Positives = 108/244 (44%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G V ++ P + EH R V+ ++PT ++
Sbjct: 79 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 138
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S D +K + + R SV TF + V + ++ R F S + +++WD+R
Sbjct: 139 GSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDR 198
Query: 185 T-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ AH + CDW+ D +A+ DK +K+WD+ +R +V +VK
Sbjct: 199 CERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAKEIHCVQTIASVARVK 258
Query: 244 FSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGV------DMSVLVEGL 295
+ P R+ LA+CS D + +WD ++ H + G+ D S L+ G
Sbjct: 259 WRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGS 318
Query: 296 LAST 299
ST
Sbjct: 319 KDST 322
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/201 (25%), Positives = 87/201 (43%)
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF-ITSSW 127
+E+H +L++ DG +K +D + + E R+V + RD F S++
Sbjct: 131 TEAH--VLLSGSQDGFMKCFDLRRKDSVSTFSGQSESVRDVQFSI-----RDYFTFASTF 183
Query: 128 DD-TVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
++ V+LW + RP R F H V+ W+P + D +++WD+ +
Sbjct: 184 ENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAK 243
Query: 186 MIIPAHEFEILA-CDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
I +A W +A+ S VD +I +WDVR VP A+ H +
Sbjct: 244 EIHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGI 303
Query: 243 KFS-PHRRNLLASCSYDMTVC 262
+ PH + L S S D T+C
Sbjct: 304 AWRHPHDPSFLLSGSKDSTLC 324
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 236 (88.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 55/225 (24%), Positives = 105/225 (46%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G+V ++ + P + EH R V+ ++PT + ++
Sbjct: 73 DVMWHQMEENLLATAATNGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVNMLLS 132
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S D +K + + + SV TF + V + ++ + F ++ + +++WD+R
Sbjct: 133 GSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRRPDR 192
Query: 185 -TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ AH + CDW+ D +A+ DK +K+WD+ RV +V +VK
Sbjct: 193 YERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMSTNRVKEIYCVQTFASVARVK 252
Query: 244 FSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGV 286
+ P RR LA+CS D + +WD ++ H + G+
Sbjct: 253 WRPERRYHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVTTGI 297
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 59/243 (24%), Positives = 96/243 (39%)
Query: 36 NGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPT 95
NG V +LS E + + V + + + ++L++ DG +K +D +
Sbjct: 90 NGAVVTWNLSRPCRNKQEQLFTEHKRTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKES 149
Query: 96 ANPIRSLHEHTREVHSA--DYNPTRRDSFITSSWDDTVKLWTVDRPTSV-RTFKEHAYCV 152
+ E R+V + DY +F S + V+LW + RP R F H V
Sbjct: 150 VSTFSGQSESVRDVQFSMKDYF-----TFAASFENGNVQLWDIRRPDRYERMFTAHTGPV 204
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILA-CDWNKYDDCLIASA 211
+ W+P + D +++WD+ I F +A W +A+
Sbjct: 205 FCCDWHPEDRGWLATGGRDKMVKVWDMSTNRVKEIYCVQTFASVARVKWRPERRYHLATC 264
Query: 212 S--VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS-PHRRNLLASCSYDMTVCLWDFMV 268
S VD +I +WDVR +P A H + + H L S S D T L+ M
Sbjct: 265 SMMVDHNIYVWDVRRPFIPFATFEEHKDVTTGIVWRHQHDPYFLLSGSKDST--LYQHMF 322
Query: 269 EDA 271
+DA
Sbjct: 323 KDA 325
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 231 (86.4 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 49/179 (27%), Positives = 89/179 (49%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHA 149
+P L H +E + +NP + +++S D T+ LW + + +T F H
Sbjct: 168 SPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHT 227
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/175 (26%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 184 (69.8 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 49/165 (29%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 37/167 (22%), Positives = 80/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D + P I +++ HT V ++
Sbjct: 181 YGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 231 (86.4 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 51/178 (28%), Positives = 89/178 (50%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW---TVDRPTSV---RT-FKEHAY 150
P L H +E + +NP +++S D T+ LW TV + + +T F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTA 228
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCL 207
V + +W+ H +F S + D L IWD R ++ + AH E+ +N Y + +
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFI 288
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 188 (71.2 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 49/165 (29%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 181 YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 187 (70.9 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 45/175 (25%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D++W H+SL + D + I+DT T+ P ++ HT EV+ +NP
Sbjct: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFIL 289
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D +++W +
Sbjct: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 36/169 (21%), Positives = 81/169 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D ++ ++D + P I +++ HT V ++
Sbjct: 181 YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNA-----TWNPRHSDVFCSASGDCTL 174
F + + D + +W D ++ + HA + A ++NP + + S D T+
Sbjct: 241 SLFGSVADDQKLMIW--DTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTV 298
Query: 175 RIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 299 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 230 (86.0 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 50/178 (28%), Positives = 86/178 (48%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHAY 150
P L H +E + +NP +++S D T+ LW ++ P R F H
Sbjct: 173 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA 232
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCL 207
V + W+ H +F S + D L IWD R ++ + AH E+ +N Y + +
Sbjct: 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 292
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+A+ S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 293 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350
Score = 193 (73.0 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 48/175 (27%), Positives = 80/175 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P ++ HT EV+ +NP
Sbjct: 234 VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 294 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353
Query: 182 MG---ST-----------MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G ST I H +I WN + +I S S D +++W +
Sbjct: 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408
Score = 192 (72.6 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 48/165 (29%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV-------REMGSTMIIPAHEFEILACDWNKYDD 205
Y +WNP + SAS D T+ +WD+ R + + I H + W+ +
Sbjct: 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE 244
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD RN P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 304
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D ++VW
Sbjct: 305 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/167 (22%), Positives = 81/167 (48%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + + L++A D ++ ++D P + + +++ HT V ++
Sbjct: 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE 244
Query: 120 DSFITSSWDDTVKLW-TVDRPTSV--RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T + TS T H V ++NP + + S D T+ +
Sbjct: 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 304
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 305 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 232 (86.7 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 54/203 (26%), Positives = 110/203 (54%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
E++ L+ A +G+V I++T + + R +H+R V+ ++P + D +T S D+
Sbjct: 80 ENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDN 139
Query: 130 TVKLWTV-DRPTSVR-TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
T+++W + D + + TF + + + +NP ++ F +A + T+++WD+R+ +
Sbjct: 140 TLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVE 199
Query: 188 -IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGY--AVRKVKF 244
I +H+ +L DW+ + +IAS D++I++WD N + LN +V ++K+
Sbjct: 200 KITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGKS----LNNVSTISSVSRIKW 255
Query: 245 SPHRRNLLASCS--YDMTVCLWD 265
P + +ASCS D + +WD
Sbjct: 256 RPGNKWHIASCSSIVDFQIHIWD 278
Score = 189 (71.6 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 60/249 (24%), Positives = 103/249 (41%)
Query: 22 RLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVA 81
R +ATA NG V + + E V D + V LAW ++
Sbjct: 83 RFLIATAAT-----NGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQ 137
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT- 140
D +++++D A+ I + + + +NP++ + F + + T++LW + +PT
Sbjct: 138 DNTLRMWDIRDSANASKI-TFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTI 196
Query: 141 SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW 200
+V H V W+P ++ S D +R+WD G ++ + + W
Sbjct: 197 AVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSN-GKSLNNVSTISSVSRIKW 255
Query: 201 NKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVLNGH-GYAVRKVKFSPHRRNLLASCSY 257
+ IAS S VD I IWDV+ +P+ H + SP + L SCS
Sbjct: 256 RPGNKWHIASCSSIVDFQIHIWDVKKPYIPLFSFTDHRDVPTGLIWKSP---SSLISCSK 312
Query: 258 DMTVCLWDF 266
D + L +F
Sbjct: 313 DSHLLLNEF 321
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/163 (21%), Positives = 76/163 (46%)
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWD-VREMGSTM--IIPAHEFEILACDWNKYD-DC 206
C ++ + + + +A+ + + IW+ VRE ++ + H + W+ DC
Sbjct: 72 CCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDC 131
Query: 207 LIASASVDKSIKIWDVRNYRVPIAV-LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++ + S D ++++WD+R+ + + ++R V+F+P + N A+ + T+ LWD
Sbjct: 132 IL-TGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWD 190
Query: 266 FMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
V + H + +D + ++AS G D + VW
Sbjct: 191 IRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVW 233
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 63/210 (30%), Positives = 106/210 (50%)
Query: 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
R+L H V+ ++ R +++S D T+K++ + +T K H V+ +NP
Sbjct: 123 RTLTGHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP 181
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ S + S S D ++RIWDV+ +PAH + A +N+ D LIAS S D ++I
Sbjct: 182 Q-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRI 239
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH- 278
WD N + +++ V VKFSP+ + +LAS + D T+ LWDF L H
Sbjct: 240 WDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSKGKTLKQYTGHE 298
Query: 279 HTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
++++ + + SV + S D +Y+W
Sbjct: 299 NSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 58/168 (34%), Positives = 88/168 (52%)
Query: 101 SLHEHTREVHSADYNPTRRDSFI-TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
+L HT+ + SA ++P + ++ TSS D TVK+W +D RT H V + W+
Sbjct: 82 TLEGHTKSISSAKFSPCGK--YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS- 138
Query: 160 RHSDVFC--SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSI 217
SD C SAS D TL+I+++ T + H + C++N L+ S S D+S+
Sbjct: 139 --SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFDESV 195
Query: 218 KIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+IWDV+ + I L H V V F+ +L+AS SYD V +WD
Sbjct: 196 RIWDVKT-GMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWD 241
Score = 183 (69.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 61/256 (23%), Positives = 120/256 (46%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GV D+AWS S +++A D ++KI++ T+ ++L H V ++NP + S
Sbjct: 131 GVNDIAWS-SDSRCVVSASDDKTLKIFEIV---TSRMTKTLKGHNNYVFCCNFNP--QSS 184
Query: 122 FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+ S S+D++V++W V ++T H+ V ++N R + S S D +RIWD
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTA 243
Query: 181 EMGSTM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG-- 236
G + ++ + ++ ++AS ++D ++K+WD + + GH
Sbjct: 244 N-GQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSKGKT-LKQYTGHENS 300
Query: 237 -YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL 295
Y + FS + S S D + +W+ + +V + HT+ + D V+ +
Sbjct: 301 KYCIF-ANFSVTGGKWIISGSEDCKIYIWNLQTRE-IVQCLEGHTQPVLASDCHP-VQNI 357
Query: 296 LASTGW--DELVYVWQ 309
+AS D +++W+
Sbjct: 358 IASGALEPDNKIHIWR 373
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 63/210 (30%), Positives = 106/210 (50%)
Query: 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
R+L H V+ ++ R +++S D T+K++ + +T K H V+ +NP
Sbjct: 123 RTLTGHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP 181
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ S + S S D ++RIWDV+ +PAH + A +N+ D LIAS S D ++I
Sbjct: 182 Q-SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRI 239
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH- 278
WD N + +++ V VKFSP+ + +LAS + D T+ LWDF L H
Sbjct: 240 WDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSKGKTLKQYTGHE 298
Query: 279 HTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
++++ + + SV + S D +Y+W
Sbjct: 299 NSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 58/168 (34%), Positives = 88/168 (52%)
Query: 101 SLHEHTREVHSADYNPTRRDSFI-TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
+L HT+ + SA ++P + ++ TSS D TVK+W +D RT H V + W+
Sbjct: 82 TLEGHTKSISSAKFSPCGK--YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS- 138
Query: 160 RHSDVFC--SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSI 217
SD C SAS D TL+I+++ T + H + C++N L+ S S D+S+
Sbjct: 139 --SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFDESV 195
Query: 218 KIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+IWDV+ + I L H V V F+ +L+AS SYD V +WD
Sbjct: 196 RIWDVKT-GMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWD 241
Score = 183 (69.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 61/256 (23%), Positives = 120/256 (46%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GV D+AWS S +++A D ++KI++ T+ ++L H V ++NP + S
Sbjct: 131 GVNDIAWS-SDSRCVVSASDDKTLKIFEIV---TSRMTKTLKGHNNYVFCCNFNP--QSS 184
Query: 122 FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+ S S+D++V++W V ++T H+ V ++N R + S S D +RIWD
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTA 243
Query: 181 EMGSTM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG-- 236
G + ++ + ++ ++AS ++D ++K+WD + + GH
Sbjct: 244 N-GQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSKGKT-LKQYTGHENS 300
Query: 237 -YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL 295
Y + FS + S S D + +W+ + +V + HT+ + D V+ +
Sbjct: 301 KYCIF-ANFSVTGGKWIISGSEDCKIYIWNLQTRE-IVQCLEGHTQPVLASDCHP-VQNI 357
Query: 296 LASTGW--DELVYVWQ 309
+AS D +++W+
Sbjct: 358 IASGALEPDNKIHIWR 373
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 229 (85.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ A ++P R + ++SS D TV+LW++ T + +K H Y V++
Sbjct: 292 TASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 350
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + +A+ S D
Sbjct: 351 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN-YVATGSAD 408
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 409 RTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 465
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 466 ELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLW 498
Score = 177 (67.4 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 65/269 (24%), Positives = 118/269 (43%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL ++ D
Sbjct: 266 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSS-ED 324
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 325 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 380
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 381 RIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 439
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH V ++FS +LAS S D TV
Sbjct: 440 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVR 496
Query: 263 LWDFM--VEDALVGRYDHHTEFAVGVDMS 289
LWD + ED D+ E +G M+
Sbjct: 497 LWDAVKAFEDL---ETDNSQELLLGTYMT 522
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 227 (85.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 158 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 277
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 278 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 336
Score = 192 (72.6 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 220 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 279
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 280 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 339
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 340 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 394
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 171 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 230
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 231 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 290
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 291 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 335
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 171 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 230
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 231 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 290
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 291 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 337
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 227 (85.0 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 158 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 217
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 277
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 278 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 336
Score = 192 (72.6 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 220 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 279
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 280 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 339
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 340 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 394
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 171 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 230
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 231 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 290
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 291 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 335
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 171 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 230
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 231 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 290
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 291 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 337
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 227 (85.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 230 (86.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ A ++P R + ++SS D TV+LW++ T + +K H Y V++
Sbjct: 533 TASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 591
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + +A+ S D
Sbjct: 592 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN-YVATGSAD 649
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 650 RTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 706
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 707 ELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLW 739
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/243 (24%), Positives = 108/243 (44%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL ++ D
Sbjct: 507 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSS-ED 565
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 566 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 621
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 622 RIFAGHLADVNCTRYHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH V ++FS +LAS S D TV
Sbjct: 681 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVR 737
Query: 263 LWD 265
LWD
Sbjct: 738 LWD 740
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 227 (85.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 211 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 270
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 330
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 331 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 273 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 332
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 333 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 392
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 393 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 447
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 224 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 283
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 284 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 343
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 344 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 388
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 224 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 283
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 284 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 343
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 344 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 390
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 227 (85.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 211 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 270
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ ++ AH E+ +N Y +
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 330
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 331 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 389
Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/175 (27%), Positives = 77/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P + HT EV+ +NP
Sbjct: 273 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 332
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 333 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 392
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 393 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 447
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 47/165 (28%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 224 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 283
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 284 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 343
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 344 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 388
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/167 (22%), Positives = 79/167 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 224 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 283
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 284 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 343
Query: 177 WDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 344 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 390
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 229 (85.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ A ++P R + ++SS D TV+LW++ T + +K H Y V++
Sbjct: 530 TASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 588
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + +A+ S D
Sbjct: 589 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN-YVATGSAD 646
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 647 RTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 703
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 704 ELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLW 736
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/243 (24%), Positives = 108/243 (44%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL ++ D
Sbjct: 504 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSS-ED 562
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 563 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 618
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 619 RIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 677
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH V ++FS +LAS S D TV
Sbjct: 678 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVR 734
Query: 263 LWD 265
LWD
Sbjct: 735 LWD 737
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 229 (85.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ A ++P R + ++SS D TV+LW++ T + +K H Y V++
Sbjct: 532 TASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 590
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + +A+ S D
Sbjct: 591 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN-YVATGSAD 648
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 649 RTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 705
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 706 ELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLW 738
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/243 (24%), Positives = 108/243 (44%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL ++ D
Sbjct: 506 SVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSS-ED 564
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 565 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 620
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 621 RIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH V ++FS +LAS S D TV
Sbjct: 680 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVR 736
Query: 263 LWD 265
LWD
Sbjct: 737 LWD 739
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 229 (85.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ A ++P R + ++SS D TV+LW++ T + +K H Y V++
Sbjct: 532 TASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 590
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + +A+ S D
Sbjct: 591 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN-YVATGSAD 648
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 649 RTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 705
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 706 ELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLW 738
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 59/243 (24%), Positives = 108/243 (44%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL ++ D
Sbjct: 506 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSS-ED 564
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 565 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 620
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 621 RIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH V ++FS +LAS S D TV
Sbjct: 680 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVR 736
Query: 263 LWD 265
LWD
Sbjct: 737 LWD 739
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 229 (85.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 60/214 (28%), Positives = 107/214 (50%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ A ++P R + ++SS D TV+LW++ T + +K H Y V++
Sbjct: 533 TASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 591
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + +A+ S D
Sbjct: 592 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN-YVATGSAD 649
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 650 RTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 706
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 707 ELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLW 739
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 59/243 (24%), Positives = 108/243 (44%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL ++ D
Sbjct: 507 SVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSS-ED 565
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 566 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 621
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 622 RIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH V ++FS +LAS S D TV
Sbjct: 681 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVR 737
Query: 263 LWD 265
LWD
Sbjct: 738 LWD 740
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 224 (83.9 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 61/236 (25%), Positives = 111/236 (47%)
Query: 43 DLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGS-VKIYDTAL----PPTA- 96
D P P + E+ DG + A L+ A GS V ++D A P T+
Sbjct: 100 DQEPIVPKV-EIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSE 158
Query: 97 -NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS------VRTFKEHA 149
+P L H +E + ++ + ++ S D + LW V + + ++ H
Sbjct: 159 CDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQ 218
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA 209
+ + W+ ++ ++F SA DC L IWD+R + HE EI +N +++ ++A
Sbjct: 219 SIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLA 278
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+AS D ++ ++D+R P+ VL+ H V +V++ P+ +LAS D + +WD
Sbjct: 279 TASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 55/233 (23%), Positives = 108/233 (46%)
Query: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAP--ALTELVAFDTADGVY-DL 66
GY + +S F E L ++ +Q+ R+ + D+S A L + ++ + D+
Sbjct: 172 GYGLAWSSFKEGYL-LSGSQD------QRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 67 AWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSS 126
AW ++++ +A D + I+D + ++ +HE RE++ +NP T+S
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVK-VHE--REINYLSFNPFNEWVLATAS 281
Query: 127 WDDTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
D TV L+ + + T+ + +H V+ W+P H V S+ D L +WD+ +G
Sbjct: 282 SDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDE 341
Query: 186 MI---IPA-------------HEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ + A H+ +I WNK + +I+S + D S+++W +
Sbjct: 342 QLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 394
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/162 (26%), Positives = 69/162 (42%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII-PAHEFE-----ILACDWNKYDDC 206
Y W+ S S D + +WDV + ++ P H +E I W+ ++
Sbjct: 173 YGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNEN 232
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
+ SA D + IWD+R ++ V H + + F+P +LA+ S D TV L+D
Sbjct: 233 IFGSAGDDCQLVIWDLRTNQMQHQV-KVHEREINYLSFNPFNEWVLATASSDSTVALFDL 291
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
A + H V+ E +LAS+G D + VW
Sbjct: 292 RKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVW 333
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 223 (83.6 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
NP L H +E + +N + +++S D TV LW + P + F H+
Sbjct: 166 NPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHS 225
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 286 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
Score = 194 (73.4 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 48/175 (27%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN SAS D T+ +WD+ +E + + I H + W+ +
Sbjct: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
Score = 142 (55.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/170 (21%), Positives = 81/170 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D + P I +++ H+ V ++
Sbjct: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
Query: 120 DSFITSSWDDTVKLW-----TVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT 173
F + + D + +W T +P+ SV C+ ++NP + + S D T
Sbjct: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKT 295
Query: 174 LRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ +WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 127 WDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
WD T +P+ SV C+ ++NP + + S D T+ +WD+R +
Sbjct: 253 WDTRSN--TTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKTVALWDLRNLKLK 307
Query: 186 M-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV----------PIAVLNG 234
+ +H+ EI W+ +++ ++AS+ D+ + +WD+ P +L
Sbjct: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 367
Query: 235 HGYAVRKVK-FS--PHRRNLLASCSYDMTVCLWDFMVED 270
HG K+ FS P+ ++ S S D + +W M E+
Sbjct: 368 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ-MAEN 405
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 221 (82.9 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 76/253 (30%), Positives = 115/253 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ +P HT V S + +
Sbjct: 62 DAVTCVNFSPS-GHLLASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQ- 116
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
SF+T+S D TVK+W+ R + + +H V A ++P + SAS D T+++WD
Sbjct: 117 SFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKT 175
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C IA+A +D ++K+WDVR +R+ + H AV
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRL-LQHYQLHSAAVN 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 234 ALSFHPSG-NYLVTASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 290
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 291 SDEQVMVWKSNFD 303
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 221 (82.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 67/249 (26%), Positives = 110/249 (44%)
Query: 84 SVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD---RPT 140
S + Y +A P L +HT+ S +N + + ++ S D T+ W ++
Sbjct: 162 SFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESD 221
Query: 141 SVRTFKEHAYC----VYNATWNPRHSDVFCSASGDCTLRIWDVREM-GSTM---IIPAHE 192
S K H V + ++ +H D+ S S D L + D+R ST + AH
Sbjct: 222 SASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHS 281
Query: 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
I + +N ++D ++A+ S DK+I +WD+RN + L GH V K+ FSPH +L
Sbjct: 282 GPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPIL 341
Query: 253 ASCSYDMTVCLWDFM-------VEDALVGR----YDH--HTEFAVGVDMSVLVEGLLAST 299
AS S D +WD E+A G + H HT + +D +A+
Sbjct: 342 ASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATA 401
Query: 300 GWDELVYVW 308
D ++ +W
Sbjct: 402 AEDNILQIW 410
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/176 (26%), Positives = 76/176 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN-PIRSLHEHTREVHSADYNPTRRDS 121
V D+ + H LL + D + ++D P + P RS+H H+ +HS +NP
Sbjct: 237 VSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFI 296
Query: 122 FITSSWDDTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
T S D T+ LW + + T + H V +++P + S S D +WD+
Sbjct: 297 LATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLS 356
Query: 181 EMGSTMIIPAHEF-----EIL-------AC----DWNKYDDCLIASASVDKSIKIW 220
+G PA E E+L +C DW + +A+A+ D ++IW
Sbjct: 357 RIGEDQ--PAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIW 410
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 217 (81.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 71/228 (31%), Positives = 112/228 (49%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVKLWTVDR-----PTSVRTFKEHAYCV 152
++ L H V A ++P RD + + +D T+++W D P +V + H +
Sbjct: 7 LQCLSGHRGRVWGAGWHP--RDPVLATCGEDKTIRIWADDGTGRWVPKTVLS-DGHTRTI 63
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
+ W+P SAS D T+ IWD R E + HE E+ + W+K L+A+
Sbjct: 64 RDVAWSPC-GRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSK-SGALLAT 121
Query: 211 ASVDKSIKIWDVRN---YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
S DKS+ IW+V Y AVLN H V+KV++ P+ ++LAS SYD T+ L+
Sbjct: 122 CSRDKSVWIWEVAQEDEYECA-AVLNTHSQDVKKVEWHPNE-DVLASASYDNTIQLYRED 179
Query: 268 VEDALVGRYD---HH--TEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310
+ D+ +D H T +++ D S LAS D+ V +WQ+
Sbjct: 180 LADSDWSSFDTLASHDSTVWSIAFDAS---GSRLASCSDDQTVRIWQE 224
Score = 157 (60.3 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW-DV---REMGSTMIIPAHEFEI 195
T ++ H V+ A W+PR V + D T+RIW D R + T++ H I
Sbjct: 5 TLLQCLSGHRGRVWGAGWHPR-DPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTI 63
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPI-AVLNGHGYAVRKVKFSPHRRNLLAS 254
W+ L ASAS D ++ IWD R+ A L GH V+ V +S LLA+
Sbjct: 64 RDVAWSPCGRFL-ASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGA-LLAT 121
Query: 255 CSYDMTVCLWDFMVEDAL--VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312
CS D +V +W+ ED + H++ V+ E +LAS +D + ++++ +
Sbjct: 122 CSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPN-EDVLASASYDNTIQLYREDL 180
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 218 (81.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 74/253 (29%), Positives = 117/253 (46%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ + + R+ HT V S + +
Sbjct: 93 DAVTCVNFSPS-GHLLASGSRDKTVRIWVPNIKGESTVFRA---HTATVRSVHFCSDGQ- 147
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
SF+T+S D T+K+W+ R + + +H V A ++P + SAS D T+++WD
Sbjct: 148 SFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKT 206
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C +A+A +D ++K+WDVR +R+ + H AV
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTC-VAAAGMDNTVKVWDVRTHRL-LQHYQLHSAAVN 264
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 265 ALSFHPSG-NYLVTASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 321
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 322 SDEQVMVWKSNFD 334
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 223 (83.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 73/254 (28%), Positives = 121/254 (47%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH-EHTREVHSADYNP 116
D++ V+D+A S + A D S D ++ P +L H+ V+SA ++P
Sbjct: 373 DSSIKVWDMAKIGQAGSGALQAENDSS----DQSIGPNGRRSYTLLLGHSGPVYSATFSP 428
Query: 117 TRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
D ++SS D T++LW+ ++ +K H Y V++A ++P F S S D T RI
Sbjct: 429 PG-DFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSP-FGHYFASCSHDRTARI 486
Query: 177 WDVREMGSTMIIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGH 235
W + + I+ H ++ W + +C IA+ S DK++++WDV+ + + GH
Sbjct: 487 WSMDRIQPLRIMAGHLSDVDCVQW--HPNCNYIATGSSDKTVRLWDVQTGEC-VRIFIGH 543
Query: 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG- 294
V + SP R +AS D T+ +WD + H++ V +S EG
Sbjct: 544 RSMVLSLAMSPDGR-YMASGDEDGTIMMWDLSTARCITPLMGHNS--CVW-SLSYSGEGS 599
Query: 295 LLASTGWDELVYVW 308
LLAS D V +W
Sbjct: 600 LLASGSADCTVKLW 613
Score = 201 (75.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 62/203 (30%), Positives = 97/203 (47%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
VY +S D +L ++ AD +++++ T L AN + H V A ++P F
Sbjct: 421 VYSATFSPPGDFVLSSS-ADTTIRLWSTKL--NANLV-CYKGHNYPVWDAQFSPFGH-YF 475
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D T ++W++DR +R H V W+P + + + S D T+R+WDV+
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQTG 534
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
I H +L+ + D +AS D +I +WD+ R I L GH V +
Sbjct: 535 ECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLSTARC-ITPLMGHNSCVWSL 592
Query: 243 KFSPHRRNLLASCSYDMTVCLWD 265
+S +LLAS S D TV LWD
Sbjct: 593 SYSGEG-SLLASGSADCTVKLWD 614
Score = 133 (51.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 41/154 (26%), Positives = 66/154 (42%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
P+R + H +V ++P + T S D TV+LW V VR F H V +
Sbjct: 494 PLRIMAGHLSDVDCVQWHPNC-NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAM 552
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWN-KY--DDCLIASASVD 214
+P S D T+ +WD+ + H +C W+ Y + L+AS S D
Sbjct: 553 SP-DGRYMASGDEDGTIMMWDLSTARCITPLMGHN----SCVWSLSYSGEGSLLASGSAD 607
Query: 215 KSIKIWDVRNYR--VPIAVLNGHGYAVRKVKFSP 246
++K+WDV + NG+ +R ++ P
Sbjct: 608 CTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFP 641
Score = 106 (42.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 81 ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVKLWTVDRP 139
+D +V+++D T +R H V S +P R ++ S +D T+ +W +
Sbjct: 522 SDKTVRLWDVQ---TGECVRIFIGHRSMVLSLAMSPDGR--YMASGDEDGTIMMWDLSTA 576
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE 192
+ H CV++ +++ S + S S DCT+++WDV ST + A E
Sbjct: 577 RCITPLMGHNSCVWSLSYSGEGS-LLASGSADCTVKLWDVTS--STKLTKAEE 626
Score = 56 (24.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 33 ILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAA-VADGSVKIYDTA 91
IL + R V S A P+++ +T +G+ S SHD L+A +D S+K++D A
Sbjct: 325 ILEDLRNRVQLSSVAMPSVSFYTFVNTHNGLN--CSSISHDGSLVAGGFSDSSIKVWDMA 382
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 218 (81.8 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 76/253 (30%), Positives = 114/253 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ +P HT V S + +
Sbjct: 24 DAVTCVNFSPS-GHLLASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQ- 78
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
SF+T+S D TVK+W R + + +H V A ++P + SAS D T+++WD
Sbjct: 79 SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKS 137
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C IA+A +D ++K+WDVR +R+ + H AV
Sbjct: 138 SRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRL-LQHYQLHSAAVN 195
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 196 GLSFHPSG-NYLITASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 252
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 253 SDEQVMVWKSNFD 265
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 219 (82.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 76/253 (30%), Positives = 115/253 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ +P HT V S + +
Sbjct: 62 DAVTCVNFSPS-GHLLASGSRDKTVRIW---IPNVKGESTVFRAHTATVRSVHFCSDGQ- 116
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
S +T+S D TVK+W+ R + + +H V A ++P + SAS D T+++WD
Sbjct: 117 SLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSP-DGRLIVSASDDKTVKLWDKT 175
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C IA+AS+D ++K+WDVR +R+ + H AV
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTC-IAAASMDNTVKVWDVRTHRL-LQHYQLHSAAVN 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 234 ALSFHPSG-NYLLTASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 290
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 291 SDEQVMVWKSNFD 303
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 216 (81.1 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 67/226 (29%), Positives = 109/226 (48%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD---RPTSVRTFKE-HAYCVYN 154
++ L H A ++P + + T D T+++W D R + + H+ + +
Sbjct: 7 LQCLTGHRGRAWGAGWHP-KGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRD 65
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212
W+P SAS D T+ IWD + E + HE E+ + W+K L+A+ S
Sbjct: 66 VAWSPC-GQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSK-SGSLLATCS 123
Query: 213 VDKSIKIWDVRN---YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
DKS+ +W+V Y AVLN H V+KV++ PH ++LAS SYD T+ L+ +
Sbjct: 124 RDKSVWVWEVAQEDEYECA-AVLNTHTQDVKKVEWHPHE-DILASASYDNTIKLYKEDLA 181
Query: 270 DALVGRYD----HH-TEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310
D+ +D H T +++ D S LAS D+ V +WQ+
Sbjct: 182 DSDWSSFDTLVSHESTVWSISFDGS---GNRLASCSDDQTVKIWQE 224
Score = 161 (61.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIW--DV--REMGSTMIIPAHEFEILACDWNKY 203
H + A W+P+ +V + D T+RIW D R + T++ H I W+
Sbjct: 13 HRGRAWGAGWHPK-GNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPC 71
Query: 204 DDCLIASASVDKSIKIWDVRNYRVPI-AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
L ASAS D ++ IWD ++ A L GH V+ V +S +LLA+CS D +V
Sbjct: 72 GQYL-ASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSG-SLLATCSRDKSVW 129
Query: 263 LWDFMVEDAL--VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 312
+W+ ED + HT+ V+ E +LAS +D + ++++ +
Sbjct: 130 VWEVAQEDEYECAAVLNTHTQDVKKVEWHPH-EDILASASYDNTIKLYKEDL 180
Score = 139 (54.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 52/213 (24%), Positives = 99/213 (46%)
Query: 67 AWSES-HD--SLLIAAVADGSVKIY--DTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
AW H ++L D +++I+ D + A + S H+R + ++P +
Sbjct: 17 AWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLS-DGHSRTIRDVAWSPCGQ-Y 74
Query: 122 FITSSWDDTVKLWTVDRPTSV----RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
++S+D TV +W D+ + T + H V + +W+ + + + S D ++ +W
Sbjct: 75 LASASFDATVAIW--DKKSGEFECNATLEGHENEVKSVSWS-KSGSLLATCSRDKSVWVW 131
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW--DVRNYR-VPIAV 231
+V E ++ H ++ +W+ ++D ++ASAS D +IK++ D+ +
Sbjct: 132 EVAQEDEYECAAVLNTHTQDVKKVEWHPHED-ILASASYDNTIKLYKEDLADSDWSSFDT 190
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 264
L H V + F N LASCS D TV +W
Sbjct: 191 LVSHESTVWSISFDGSG-NRLASCSDDQTVKIW 222
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 43 DLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIY---DTALP--PTAN 97
D +P + L + + VYD++W + LL A D V+I+ + + P PT
Sbjct: 237 DNTPVWKCVCTLAGYHSRS-VYDISWCKQ-SGLLATACGDDMVRIFKEVEGSSPHEPTFE 294
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+ S H H+++V++ ++NPT +T+S D VKLW
Sbjct: 295 MVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
Score = 45 (20.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 272 LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+VG H++ V+ + V GLL +T D V +W+
Sbjct: 295 MVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLWK 332
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 219 (82.2 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 56/214 (26%), Positives = 99/214 (46%)
Query: 72 HDSLLIAAVADGS-VKIYDTALPPTA------NPIRSLHEHTREVHSADYNPTRRDSFIT 124
H+ +IA+ V I+D P+ P L H E + ++ TR +T
Sbjct: 130 HNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLT 189
Query: 125 SSWDDTVKLWTVDRPTSVR-------TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+ D + W ++ ++ FK H+ + +++ H+ VF S D L +W
Sbjct: 190 AGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 249
Query: 178 DVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGY 237
D+R+ + H E+ +N + + ++A+ SVDK++ +WD+RN R + L H
Sbjct: 250 DLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHND 309
Query: 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFM-VED 270
+ +V FSPH +LAS D V +WD ++D
Sbjct: 310 EIFQVSFSPHYETVLASSGSDDRVIVWDISKIQD 343
Score = 159 (61.0 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 56/220 (25%), Positives = 91/220 (41%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-P-----TSVRT---FKEHAYCVYNA 155
H EVH A Y P + D V ++ + P T R K H Y
Sbjct: 118 HPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGM 177
Query: 156 TWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIPAHEFEILACD-----WNKYDDCLI 208
+W+ +A D + WD+ + S I+P +F+ + + ++ + +
Sbjct: 178 SWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVF 237
Query: 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268
S D+ + +WD+R + + + GH V + F+P +LA+ S D TV LWD
Sbjct: 238 GSVGDDRKLNLWDLRQSKPQLTAV-GHTAEVNCITFNPFSEYILATGSVDKTVALWDMRN 296
Query: 269 EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HH + V S E +LAS+G D+ V VW
Sbjct: 297 MRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVW 336
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/170 (22%), Positives = 71/170 (41%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN----PIRSLHEHTREVHSADYNPTRR 119
Y ++WS + + L+ A DG + +D T + P H+ ++
Sbjct: 175 YGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHN 234
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
F + D + LW + + T H V T+NP + + S D T+ +WD+
Sbjct: 235 FVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDM 294
Query: 180 REMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP 228
R M M + H EI ++ + + ++AS+ D + +WD+ + P
Sbjct: 295 RNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDP 344
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 218 (81.8 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 76/253 (30%), Positives = 114/253 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ +P HT V S + +
Sbjct: 62 DAVTCVNFSPS-GHLLASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQ- 116
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
SF+T+S D TVK+W R + + +H V A ++P + SAS D T+++WD
Sbjct: 117 SFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKS 175
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C IA+A +D ++K+WDVR +R+ + H AV
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRL-LQHYQLHSAAVN 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 234 GLSFHPSG-NYLITASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 290
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 291 SDEQVMVWKSNFD 303
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 222 (83.2 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 59/214 (27%), Positives = 105/214 (49%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA+ ++ L+ H+ V+ ++P R + ++ S D TV+LW++ T + +K H Y V++
Sbjct: 512 TASELKILYGHSGPVYGTSFSPDR-NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 570
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P + F S D R+W I H ++ ++ + IA+ S D
Sbjct: 571 TQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN-YIATGSAD 628
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ R LA+ + D V LWD + +VG
Sbjct: 629 RTVRLWDVLNGNC-VRIFTGHKGPIHSLAFSPNGR-FLATGATDGRVLLWD-IGHGLMVG 685
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S E +LAS D V +W
Sbjct: 686 ELKGHTDTIYALRFSRDGE-ILASGSMDNTVRLW 718
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 58/243 (23%), Positives = 107/243 (44%)
Query: 24 AVATAQNFGILGNGRVHVLDLSPAAPALTEL-VAFDTADGVYDLAWSESHDSLLIAAVAD 82
+V A + ++ VL+ +EL + + + VY ++S + LL + D
Sbjct: 486 SVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCS-ED 544
Query: 83 GSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV 142
G+V+++ T + H V ++P F++ D +LW D +
Sbjct: 545 GTVRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPYGY-YFVSGGHDRVARLWATDHYQPL 600
Query: 143 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK 202
R F H V ++P +S+ + S D T+R+WDV I H+ I + ++
Sbjct: 601 RIFAGHLADVTCTRFHP-NSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 659
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVC 262
+ +A+ + D + +WD+ + + + L GH + ++FS +LAS S D TV
Sbjct: 660 -NGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTIYALRFS-RDGEILASGSMDNTVR 716
Query: 263 LWD 265
LWD
Sbjct: 717 LWD 719
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 214 (80.4 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 69/258 (26%), Positives = 126/258 (48%)
Query: 60 ADGVYDLAWS-ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTR 118
+ G+ DLAWS +SH + +A D +++I+D P ++ L HT V ++NP
Sbjct: 85 SSGISDLAWSSDSHYTC--SASDDCTLRIWDARSPYEC--LKVLRGHTNFVFCVNFNPPS 140
Query: 119 RDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD 178
+ ++ S+D+T+++W V VR K H+ + + +N R + SAS D + +IWD
Sbjct: 141 -NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN-RDGSLIVSASHDGSCKIWD 198
Query: 179 VREMGSTMIIPAHEFEILACDWNKY--DDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+E T + + + A + K+ + I A++D ++K+ + + + V GH
Sbjct: 199 AKE--GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKF-LKVYTGHT 255
Query: 237 YAVRKVK--FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG 294
V + FS + S S D V LWD + L R + HT+ + V V+
Sbjct: 256 NKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQ-RLEGHTDAVISVSCHP-VQN 313
Query: 295 LLASTG--WDELVYVWQQ 310
++S+G D+ + +W+Q
Sbjct: 314 EISSSGNHLDKTIRIWKQ 331
Score = 195 (73.7 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 65/211 (30%), Positives = 100/211 (47%)
Query: 105 HTREVHSADYNPTR--RDSFIT-SSWDD-TVKLWTVDRPTS-VRTFKEHAYCVYNATWNP 159
H E HS+ + DS T S+ DD T+++W P ++ + H V+ +NP
Sbjct: 79 HRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP 138
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
S++ S S D T+RIW+V+ +I AH I + +N+ D LI SAS D S KI
Sbjct: 139 P-SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR-DGSLIVSASHDGSCKI 196
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH 279
WD + +++ AV KFSP+ + +L + + D T+ L ++ L Y H
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVA-TLDSTLKLSNYATGKFLKV-YTGH 254
Query: 280 TE--FAVGVDMSVLVEGLLASTGWDELVYVW 308
T F + SV + S D VY+W
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Score = 192 (72.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 50/188 (26%), Positives = 94/188 (50%)
Query: 79 AVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR 138
A G+V IY P + +++L HT + ++ + ++S D T+ LW+
Sbjct: 21 AGTSGNVPIYK----PYRH-LKTLEGHTAAISCVKFS-NDGNLLASASVDKTMILWSATN 74
Query: 139 PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILA 197
+ + ++ H+ + + W+ S CSAS DCTLRIWD R + ++ H +
Sbjct: 75 YSLIHRYEGHSSGISDLAWSS-DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 198 CDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSY 257
++N + LI S S D++I+IW+V+ + + ++ H + V F+ +L+ S S+
Sbjct: 134 VNFNPPSN-LIVSGSFDETIRIWEVKTGKC-VRMIKAHSMPISSVHFN-RDGSLIVSASH 190
Query: 258 DMTVCLWD 265
D + +WD
Sbjct: 191 DGSCKIWD 198
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 217 (81.4 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 49/180 (27%), Positives = 87/180 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVR------TFKEHA 149
NP L H +E + +N +++S D TV LW ++ P + F H+
Sbjct: 167 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L +WD R ++ ++ AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAV-RKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + + V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWD 346
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + ++DT T+ P + HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNAT-WNPRHSDVFCSASGDCTLRIWDVR 180
T S D TV LW + + + TF+ H ++ W+P + + S+ D L +WD+
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLS 348
Query: 181 EMGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
++G I H +I WN + +I S S D ++IW +
Sbjct: 349 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 404
Score = 165 (63.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/167 (28%), Positives = 78/167 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV----RE---MGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ +E + + + H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + +WD R+ P +++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTE--FAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + F V V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQV-VHWSPHNETILASSGTDRRLNVW 345
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/168 (22%), Positives = 79/168 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D P I +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-TVDRPTSVRTFKEHAYCV-YNA-TWNPRHSDVFCSASGDCTLRI 176
F + + D + +W T TS + A+ N ++NP + + S D T+ +
Sbjct: 240 SLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 177 WDVREMGSTM-IIPAHEFEIL-ACDWNKYDDCLIASASVDKSIKIWDV 222
WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDL 347
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 218 (81.8 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 84 SVKIYDTALPPTAN-PIRSLHEHTREVHSADYNPTRR-DSFITSSWDDTVKLWTVDRP-- 139
S + T LPP+A+ P+ +L H E ++ D++P +T D + + T
Sbjct: 232 SFDVPGTMLPPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGG 291
Query: 140 --TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST--MIIPAHEFEI 195
T R F+ HA V W+P +VF SAS D T+++WDVR + + + ++
Sbjct: 292 WVTDTRAFRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDV 351
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRV-----------PIAVLNGHGYAVRKVKF 244
W+K L+A+ + D +WD+R+++ P+A N H + +++
Sbjct: 352 NVMTWSKQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEW 411
Query: 245 SPHRRNLLASCSYDMTVCLWDFMVE 269
P +++A S D TV LWD VE
Sbjct: 412 HPTDDSVIAVGSADNTVTLWDLAVE 436
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 216 (81.1 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
+P L H +E + +N +++S D TV LW + P + F H+
Sbjct: 167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 194 (73.4 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 48/175 (27%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV-------REMGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ + + + I H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 142 (55.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 36/170 (21%), Positives = 81/170 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D + P + +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-----TVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT 173
F + + D + +W T +P+ SV C+ ++NP + + S D T
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKT 296
Query: 174 LRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ +WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 297 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 127 WDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
WD T +P+ SV C+ ++NP + + S D T+ +WD+R +
Sbjct: 254 WDTRSN--TTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKTVALWDLRNLKLK 308
Query: 186 M-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV----------PIAVLNG 234
+ +H+ EI W+ +++ ++AS+ D+ + +WD+ P +L
Sbjct: 309 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
Query: 235 HGYAVRKVK-FS--PHRRNLLASCSYDMTVCLWDFMVED 270
HG K+ FS P+ ++ S S D + +W M E+
Sbjct: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ-MAEN 406
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 216 (81.1 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRT------FKEHA 149
+P L H +E + +N +++S D TV LW + P + F H+
Sbjct: 167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHS 226
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDC 206
V + W+ H +F S + D L IWD R ++ + AH E+ +N Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 286
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
++A+ S DK++ +WD+RN ++ + H + +V +SPH +LAS D + +WD
Sbjct: 287 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
Score = 194 (73.4 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 48/175 (27%), Positives = 78/175 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V D+AW H+SL + D + I+DT T+ P S+ HT EV+ +NP
Sbjct: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 288
Query: 123 ITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ +
Sbjct: 289 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Query: 182 MGSTM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+G I H +I WN + +I S S D ++IW +
Sbjct: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 169 (64.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 45/165 (27%), Positives = 74/165 (44%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV-------REMGSTMIIPAHEFEILACDWNKYDD 205
Y +WN S SAS D T+ +WD+ + + + + H + W+ +
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHE 239
Query: 206 CLIASASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R+ P ++ H V + F+P+ +LA+ S D TV L
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
Score = 141 (54.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 36/170 (21%), Positives = 81/170 (47%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPI---RSLHE-HTREVHSADYNPTRR 119
Y L+W+ + L++A D +V ++D + P + +++ H+ V ++
Sbjct: 180 YGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHE 239
Query: 120 DSFITSSWDDTVKLW-----TVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT 173
F + + D + +W T +P+ SV C+ ++NP + + S D T
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKT 296
Query: 174 LRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ +WD+R + + +H+ EI W+ +++ ++AS+ D+ + +WD+
Sbjct: 297 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 127 WDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST 185
WD T +P+ SV C+ ++NP + + S D T+ +WD+R +
Sbjct: 254 WDTRSN--TTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKTVALWDLRNLKLK 308
Query: 186 M-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV----------PIAVLNG 234
+ +H+ EI W+ +++ ++AS+ D+ + +WD+ P +L
Sbjct: 309 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
Query: 235 HGYAVRKVK-FS--PHRRNLLASCSYDMTVCLWDFMVED 270
HG K+ FS P+ ++ S S D + +W M E+
Sbjct: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ-MAEN 406
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 217 (81.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 48/157 (30%), Positives = 81/157 (51%)
Query: 64 YDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI 123
Y+ +S + L ++A D + ++D + PI +H H + V+ A ++P R
Sbjct: 350 YEACLKQSGERL-VSASDDLQLILWDPQ--KSTKPITKMHGHQKVVNHASFSPDGR-CIA 405
Query: 124 TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG 183
T+S+D +V+LW + T + H VY W+ S + S+S D TL++WDVR
Sbjct: 406 TASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKK 464
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+P HE ++ A DW+ D +AS DK+++IW
Sbjct: 465 MKFDLPGHEDQVFAVDWSP-DGQRVASGGADKAVRIW 500
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 54/173 (31%), Positives = 86/173 (49%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
S++ H + SA ++P+ +T S D T +LW D T + T K H V W P
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPD 188
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTM--IIPAHEFEILACDWNKYD---DC---LIASAS 212
S + + S D T+R WD ++ GS + + H I+A W D L+AS S
Sbjct: 189 AS-IIATGSMDNTIRFWDPKK-GSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGS 246
Query: 213 VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
D +++IW+V+ R + L+GH + V++ +N + S SYD T+ +WD
Sbjct: 247 KDNTVRIWNVK-LRTLLFTLSGHTAPITCVRWGG--QNWIYSSSYDKTIRIWD 296
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 120 DSFITSSWDDTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD 178
+ +++S D + LW + T + H V +A+++P +AS D ++R+WD
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSP-DGRCIATASFDSSVRLWD 417
Query: 179 VREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYA 238
+ + H + C W+ D L+ S+S D ++K+WDVR+ ++ L GH
Sbjct: 418 GKTGKFLATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKKMKFD-LPGHEDQ 475
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLW 264
V V +SP + + AS D V +W
Sbjct: 476 VFAVDWSPDGQRV-ASGGADKAVRIW 500
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 54/206 (26%), Positives = 88/206 (42%)
Query: 66 LAWSESH---DS---LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRR 119
L W H DS LL + D +V+I++ L + +L HT + + +
Sbjct: 226 LCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTL---LFTLSGHTAPITCVRWGG--Q 280
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+ +SS+D T+++W + K HA V + + + H V S + D T +
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH--VLRSGAYDHT--DFKP 336
Query: 180 REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAV 239
+ +E AC K + SAS D + +WD + PI ++GH V
Sbjct: 337 KSFSDERRKAKERYE--AC--LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVV 392
Query: 240 RKVKFSPHRRNLLASCSYDMTVCLWD 265
FSP R +A+ S+D +V LWD
Sbjct: 393 NHASFSPDGR-CIATASFDSSVRLWD 417
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 167 SASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY 225
SAS D L +WD ++ + + H+ + ++ C IA+AS D S+++WD +
Sbjct: 363 SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRC-IATASFDSSVRLWDGKTG 421
Query: 226 RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD--HHTEFA 283
+ +A L GH AV + +S R LL S S D T+ +WD + ++D H +
Sbjct: 422 KF-LATLRGHVAAVYQCAWSTDSR-LLVSSSQDTTLKVWDVRSKKM---KFDLPGHEDQV 476
Query: 284 VGVDMSVLVEGL-LASTGWDELVYVW 308
VD S +G +AS G D+ V +W
Sbjct: 477 FAVDWSP--DGQRVASGGADKAVRIW 500
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 43/168 (25%), Positives = 71/168 (42%)
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H + +A ++P S + SGD T R+WD + H + W D +
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAP-DASI 191
Query: 208 IASASVDKSIKIWDVRNYRVPIA-VLNGHGYAVRKVKFSP-HRRN-----LLASCSYDMT 260
IA+ S+D +I+ WD + PI L H + + + P H LLAS S D T
Sbjct: 192 IATGSMDNTIRFWDPKKGS-PIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNT 250
Query: 261 VCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
V +W+ + L+ HT V + + S+ +D+ + +W
Sbjct: 251 VRIWNVKLR-TLLFTLSGHTAPITCVRWGG--QNWIYSSSYDKTIRIW 295
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 214 (80.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 64/195 (32%), Positives = 96/195 (49%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 132 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQ 191
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 192 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 248
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVD-----MSVL------VEG 294
P LL + SYD +V +WD + L R HHT+ VD MS L EG
Sbjct: 249 PDSA-LLVTASYDTSVIMWDPYTGERL--RSLHHTQLEAPVDDSDVHMSSLRSVCFSPEG 305
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 306 LYLATVADDRLLRIW 320
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/202 (23%), Positives = 97/202 (48%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P +++S D T+++W
Sbjct: 125 ILATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIW 181
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 182 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD------VRNYR-----VPIAVLNGHGYAVRKV 242
+++CD++ D L+ +AS D S+ +WD +R+ P+ + H ++R V
Sbjct: 241 SVVSCDFSP-DSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSV 299
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
FSP LA+ + D + +W
Sbjct: 300 CFSPEGL-YLATVADDRLLRIW 320
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 44/156 (28%), Positives = 76/156 (48%)
Query: 158 NPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASAS 212
+P+ DV C A+G D ++IW+V + G ++ + H+ + + ++ SAS
Sbjct: 115 HPQVPDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPNGSLILVSAS 173
Query: 213 VDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL 272
DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M L
Sbjct: 174 RDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRSYTL 231
Query: 273 VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ + + H V D S LL + +D V +W
Sbjct: 232 IRKLEGHQSSVVSCDFSP-DSALLVTASYDTSVIMW 266
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 196 (74.1 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 54/187 (28%), Positives = 88/187 (47%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHT 280
+ HT
Sbjct: 183 SEFPGHT 189
Score = 136 (52.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVD 214
H + +++ ++ L+AS S D
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSD 210
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 213 (80.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 59/242 (24%), Positives = 109/242 (45%)
Query: 93 PP---TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT----- 144
PP NP L H+ E + ++ ++ ++ S D + LW ++ ++
Sbjct: 162 PPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ 221
Query: 145 -FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST---MIIPAHEFEILACDW 200
FK H V + W+ RH +F S D L IWD+R ++ + AH E+ +
Sbjct: 222 IFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAF 281
Query: 201 NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMT 260
N +++ ++A+ S DK++K++D+R + + H V +V ++P +LASC
Sbjct: 282 NPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRR 341
Query: 261 VCLWDFM-------VEDALVGR----YDH--HTEFAVGVDMSVLVEGLLASTGWDELVYV 307
+ +WD VEDA G + H HT + + +++S D ++ +
Sbjct: 342 LMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQI 401
Query: 308 WQ 309
WQ
Sbjct: 402 WQ 403
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 54/222 (24%), Positives = 102/222 (45%)
Query: 61 DGVYDLAWSESHDSLLIAA-VADGSVKIYD----TALPP---TANPIRSLHEHTREVHSA 112
DG + A + +IA + V ++D + PP NP L H+ E +
Sbjct: 125 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 184
Query: 113 DYNPTRRDSFITSSWDDTVKLWTVDRPTSVRT------FKEHAYCVYNATWNPRHSDVFC 166
++ ++ ++ S D + LW ++ ++ FK H V + W+ RH +F
Sbjct: 185 SWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFG 244
Query: 167 SASGDCTLRIWDVREMGST---MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
S D L IWD+R ++ + AH E+ +N +++ ++A+ S DK++K++D+R
Sbjct: 245 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 304
Query: 224 NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+ + H V +V ++P +LASC + +WD
Sbjct: 305 KLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWD 346
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 57/229 (24%), Positives = 103/229 (44%)
Query: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVY-DLAW 68
GY + +S F + L ++ + + I + ++ +P +L F +GV D+AW
Sbjct: 181 GYGLSWSKFKQGHL-LSGSDDAQIC----LWDINATPKNKSLDAQQIFKAHEGVVEDVAW 235
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD 128
H+ L + D + I+D P + P++S+ H+ EV+ +NP T S D
Sbjct: 236 HLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTD 295
Query: 129 DTVKLWTVDR-PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
TVKL+ + + T++ TF H V+ WNP++ + S L +WD+ +
Sbjct: 296 KTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQT 355
Query: 188 I------P--------AHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ P H +I WN +D +I+S + D ++IW +
Sbjct: 356 VEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQM 404
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 212 (79.7 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
++A+++S S I D + KI+DTA + + +L H V++ +N D T
Sbjct: 97 NVAFNKS-GSCFITGSYDRTCKIWDTA---SGEELHTLEGHRNVVYAIAFNNPYGDKVAT 152
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS 184
S+D T KLW+ + TF+ H + +NP+ S + + S D T ++WDV
Sbjct: 153 GSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ-STLVATGSMDTTAKLWDVESGEE 211
Query: 185 TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244
+ H EI++ +N D L+ + S D + +WDV + R + VL+GH + V+F
Sbjct: 212 VSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGR-KVHVLSGHRGEISCVQF 269
Query: 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE 281
+ +L+A+ S D + +WD L H+ E
Sbjct: 270 N-WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Score = 175 (66.7 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
R+L H + + +N + FIT S+D T K+W + T + H VY +N
Sbjct: 86 RALQAHILPLTNVAFNKSG-SCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIK 218
+ D + S D T ++W E G H EI+ +N L+A+ S+D + K
Sbjct: 145 PYGDKVATGSFDKTCKLWSA-ETGKCFYTFRGHTAEIVCLAFNP-QSTLVATGSMDTTAK 202
Query: 219 IWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+WDV + ++ L GH + + F+ L+ S+D T LWD
Sbjct: 203 LWDVESGE-EVSTLAGHFAEIISLCFNTTGDRLVTG-SFDHTAILWD 247
Score = 149 (57.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 54/196 (27%), Positives = 89/196 (45%)
Query: 74 SLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
S L+A + D + K++D + + +L H E+ S +N T D +T S+D T
Sbjct: 189 STLVATGSMDTTAKLWDVE---SGEEVSTLAGHFAEIISLCFNTTG-DRLVTGSFDHTAI 244
Query: 133 LWTVDRPTSVRTFKEHA---YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-I 188
LW V V H CV W+ + +AS D + ++WD E G + +
Sbjct: 245 LWDVPSGRKVHVLSGHRGEISCV-QFNWD---CSLIATASLDKSCKVWDA-EGGQCLATL 299
Query: 189 PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHR 248
H E+L +N Y LIA+AS D + +++ ++ + L GH + KV F+
Sbjct: 300 LGHNDEVLDVCFN-YTGQLIATASADGTSRVFSTDTFQC-LCQLEGHKGEISKVCFNAQG 357
Query: 249 RNLLASCSYDMTVCLW 264
+L + S D T +W
Sbjct: 358 SRVLTA-SVDKTSRVW 372
Score = 124 (48.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 40/147 (27%), Positives = 68/147 (46%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
SL+ A D S K++D + +L H EV +N T + T+S D T ++
Sbjct: 274 SLIATASLDKSCKVWDAE---GGQCLATLLGHNDEVLDVCFNYTGQ-LIATASADGTSRV 329
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
++ D + + H + +N + S V +AS D T R+W V+ ++ H
Sbjct: 330 FSTDTFQCLCQLEGHKGEISKVCFNAQGSRVL-TASVDKTSRVWCVKTGACLQVLEGHSD 388
Query: 194 EILACDWNKYDDCLIASASVDKSIKIW 220
EI +C +N Y+ I + S D + +IW
Sbjct: 389 EIFSCAFN-YEGDTIITGSKDNTCRIW 414
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 212 (79.7 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 72/255 (28%), Positives = 122/255 (47%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL ++ D +V+++ +P HT V S ++ +
Sbjct: 61 DAVTCVQFSPSAH-LLASSSRDKTVRLW---VPSVKGESVLFRAHTGSVRSVCFSADGQ- 115
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV- 179
S +T+S D ++KLW+V R + T +EH V A ++P + S S D T+++WD
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLWDAS 174
Query: 180 -REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYA 238
R++ T P + D++ C IA+AS D ++++WD+R + + + H A
Sbjct: 175 SRQLIHTFCEPGGYSSYV--DFHPSSTC-IATASSDNTVRVWDIRTHTL-LQHYQVHSAA 230
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLAS 298
V + F P +LL + S D T+ + D ++E L+ H A V S + AS
Sbjct: 231 VNALSFHPSGNHLLTASS-DSTLKILD-LLEGRLLYTLHGHQGSASCVSFSRSGDQF-AS 287
Query: 299 TGWDELVYVWQQGMD 313
G D+ V VW+ D
Sbjct: 288 AGSDQQVMVWRTNFD 302
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 42/174 (24%), Positives = 79/174 (45%)
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195
+D PT R FK H + + ++P + S S D ++ +W+++ H+ +
Sbjct: 5 LDDPTLERNFKGHRDAITSLDFSPSGKQI-ASGSVDASVMVWNMKPQSRAYRFTGHK-DA 62
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASC 255
+ C L+AS+S DK++++W V + + + H +VR V FS ++LL +
Sbjct: 63 VTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTA- 120
Query: 256 SYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
S D ++ LW + ++ H + S +G L+ S D V +W
Sbjct: 121 SDDQSIKLWS-VHRQKIICTLREHNNWVRCARFSP--DGQLMVSVSDDRTVKLW 171
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 211 (79.3 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 102 LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVD------RPTSVRT-FKEHAYCVYN 154
L H +E + +NP +++S D T+ LW + + +T F H V +
Sbjct: 173 LRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVED 232
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASA 211
+W+ H +F S + D L IWD R ++ + A+ E+ +N + ++AS
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASG 292
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S DK++ +WD+RN ++ + H + +V++SPH +LAS D + +WD
Sbjct: 293 SPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
Score = 186 (70.5 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 49/165 (29%), Positives = 76/165 (46%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV-------REMGSTMIIPAHEFEILACDWNKYDD 205
Y +WNP S SAS D T+ +WD+ + +G+ I H + W+ +
Sbjct: 181 YGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHE 240
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
L S + D+ + IWD R N P ++ + V + F+P+ +LAS S D TV L
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVAL 300
Query: 264 WDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
WD + ++ H + V S E +LAS+G D + VW
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 56/233 (24%), Positives = 101/233 (43%)
Query: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTA-DG----VY 64
GY + ++P+ L A+ + + + D+S A P ++V T G V
Sbjct: 180 GYGLSWNPYLSGYLLSASDDH-------TICLWDIS-AVPKEGKVVGAKTIFTGHTAVVE 231
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D++W H+SL + D + I+DT T+ P S+ +T EV+ +NP +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILAS 291
Query: 125 SSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMG 183
S D TV LW + + + +F+ H ++ W+P + + S+ D L +WD+ ++G
Sbjct: 292 GSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 184 STM--------------IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
I H +I WN + +I S S D +++W +
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 52/225 (23%), Positives = 96/225 (42%)
Query: 64 YDLAWSESHDSLL--IAAVA-DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
Y L+ S+ H L I+AV +G V T + + H +H + + D
Sbjct: 192 YLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHL--LHESLFGSVADD 249
Query: 121 SFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+ WD +P+ SV + C+ ++NP + S S D T+ +WD+
Sbjct: 250 QKLMI-WDTRSN--NTSKPSHSVDAYTAEVNCL---SFNPNSEFILASGSPDKTVALWDL 303
Query: 180 REMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY---RVPIAVLNG- 234
R + + +H+ EI W+ +++ ++AS+ D+ + +WD+ + P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 235 ------HGYAVRKVK-FS--PHRRNLLASCSYDMTVCLWDFMVED 270
HG K+ FS P+ ++ S S D + +W M E+
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ-MAEN 407
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 214 (80.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 51/173 (29%), Positives = 87/173 (50%)
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVY 153
P N + + HT + ++P+ TSS D T+KLW +++ T + H + V+
Sbjct: 390 PQGNVLLTGSGHTDWLSGCCFHPSG-SKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVW 448
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
+ TW+ D SAS D T +IWDV + H + + ++ + + L+ +AS
Sbjct: 449 SCTWHSC-GDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILL-TASA 506
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
DK++ +WD R + + L GH ++V F+P R +++ASC LWDF
Sbjct: 507 DKTLSVWDARTGKCEQS-LYGHMHSVNDATFTP-RGHIIASCDARGVTKLWDF 557
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 54/182 (29%), Positives = 87/182 (47%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNAT 156
N I LHE V +P R D I+ S D K+ + + + T H +
Sbjct: 353 NNIFRLHE--LPVSCIVMHPCR-DYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCC 409
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKS 216
++P S + ++SGD T+++WD+ + T+ + H + +C W+ D +ASAS+D +
Sbjct: 410 FHPSGSKL-ATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD-FVASASLDMT 467
Query: 217 IKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
KIWDV + R L GH +V ++F P N+L + S D T+ +WD Y
Sbjct: 468 SKIWDVNSERCRYT-LYGHTDSVNSIEFFPFS-NILLTASADKTLSVWDARTGKCEQSLY 525
Query: 277 DH 278
H
Sbjct: 526 GH 527
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/236 (26%), Positives = 109/236 (46%)
Query: 35 GNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPP 94
G+ + + DL+ LT L + A V+ W D + A++ D + KI+D
Sbjct: 422 GDSTIKLWDLNKGECTLT-LEGHNHA--VWSCTWHSCGDFVASASL-DMTSKIWDV---- 473
Query: 95 TANPIR-SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVY 153
+ R +L+ HT V+S ++ P + +T+S D T+ +W ++ H + V
Sbjct: 474 NSERCRYTLYGHTDSVNSIEFFPFS-NILLTASADKTLSVWDARTGKCEQSLYGHMHSVN 532
Query: 154 NATWNPR-HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNK--YDDC--LI 208
+AT+ PR H C A G ++WD R++ IP ++ N+ +D ++
Sbjct: 533 DATFTPRGHIIASCDARG--VTKLWDFRKL-----IPIVSIDVGPSSGNEVNFDQSGRVL 585
Query: 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 264
A AS + I + D+++ ++ V GH V V FS NL + S D T+ LW
Sbjct: 586 AQASANGIIHLLDLKSGQIHKLV--GHESEVHSVVFSHLGENLYSGGS-DGTIRLW 638
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 211 (79.3 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 96 ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR----PTSVRTFKEHAYC 151
A P+ S H E + D++P ++ + +W R F H+
Sbjct: 215 ATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFSSHSKS 274
Query: 152 VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCLIA 209
V + W+P + VF S S D ++RIWD+R ++M+ AH ++ WN+ + I
Sbjct: 275 VEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTEP-FIL 333
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
S D +K+WD+R ++ P+A H V V++SP ++ A+ D + WD
Sbjct: 334 SGGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQWDLS 393
Query: 268 VEDALVG 274
VE +G
Sbjct: 394 VESCDMG 400
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDT-ADGVYDLAW 68
G+++ +SP R+ + +HV + + F + + V DL W
Sbjct: 228 GFAIDWSPKVPGRMVSGDCKK-------NIHVWEPQEGGTWKIDQRPFSSHSKSVEDLQW 280
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE-HTREVHSADYNPTRRDSFITSSW 127
S + ++ + D S++I+D PP N + S +E H+ +V+ +N R + FI S
Sbjct: 281 SPTEATVFASCSVDQSIRIWDIRAPP--NSMLSANEAHSSDVNVISWN--RTEPFILSGG 336
Query: 128 DD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
DD +K+W + + S V +FK+H+ V + W+P S VF ++ D + WD+
Sbjct: 337 DDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQWDL 392
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 214 (80.4 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 67/215 (31%), Positives = 99/215 (46%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T+ ++ + H+ V S + T D V +W V +P + + H V
Sbjct: 9 TSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGC 68
Query: 155 ATWNPRHSDVFC-SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
+N V S SG +LR+WD+ + H+ I + D++ + L AS SV
Sbjct: 69 IQFNSSEERVVAGSLSG--SLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL-ASGSV 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WDVR + + GH AVR + FSP + LAS S D TV LWD ++ ++
Sbjct: 126 DSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGK-WLASASDDSTVKLWD-LIAGKMI 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT AV V E LLAS D V +W
Sbjct: 183 TEFTSHTS-AVNVVQFHPNEYLLASGSADRTVKLW 216
Score = 187 (70.9 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 52/197 (26%), Positives = 93/197 (47%)
Query: 71 SHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT 130
S + ++A GS++++D A +R+L H + S D++P + + S D
Sbjct: 73 SSEERVVAGSLSGSLRLWDLE---AAKILRTLMGHKASISSLDFHPMG-EYLASGSVDSN 128
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI--I 188
+KLW V R V +K H V ++P SAS D T+++WD+ + MI
Sbjct: 129 IKLWDVRRKGCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDL--IAGKMITEF 185
Query: 189 PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHR 248
+H + ++ ++ L+AS S D+++K+WD+ + + I G VR V F+P
Sbjct: 186 TSHTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEKFNM-IGSSEGETGVVRSVLFNPDG 243
Query: 249 RNLLASCSYDMTVCLWD 265
L + + V W+
Sbjct: 244 SCLYSGSENTLRVYGWE 260
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 210 (79.0 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 53/192 (27%), Positives = 92/192 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S I D + K++DTA + + +L H V++ +N D T S+D T KL
Sbjct: 105 SCFITGSYDRTCKLWDTA---SGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W+V+ TF+ H + ++NP+ S + + S D T ++WD++ + H
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQNGEEVYTLRGHSA 220
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
EI++ +N D +I + S D ++ +WD R + +L GH + F+ +L+
Sbjct: 221 EIISLSFNTSGDRII-TGSFDHTVVVWDADTGR-KVNILIGHCAEISSASFN-WDCSLIL 277
Query: 254 SCSYDMTVCLWD 265
+ S D T LWD
Sbjct: 278 TGSMDKTCKLWD 289
Score = 192 (72.6 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 52/187 (27%), Positives = 85/187 (45%)
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
FIT S+D T KLW + T + H VY +N + D + S D T ++W V E
Sbjct: 107 FITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-E 165
Query: 182 MGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
G H EI+ +N L+A+ S+D + K+WD++N + L GH +
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNP-QSTLVATGSMDTTAKLWDIQNGE-EVYTLRGHSAEII 223
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVE---DALVGRYDHHTEFAVGVDMSVLVEGLLA 297
+ F+ ++ S+D TV +WD + L+G + + D S+++ G +
Sbjct: 224 SLSFNTSGDRIITG-SFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMD 282
Query: 298 STG--WD 302
T WD
Sbjct: 283 KTCKLWD 289
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 59/246 (23%), Positives = 104/246 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
VY +A++ + + D + K++ T + HT E+ +NP +
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVE---TGKCYHTFRGHTAEIVCLSFNP-QSTLV 192
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
T S D T KLW + V T + H+ + + ++N D + S D T+ +WD
Sbjct: 193 ATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTS-GDRIITGSFDHTVVVWDADTG 251
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
I+ H EI + +N +D LI + S+DK+ K+WD N + +A L GH +
Sbjct: 252 RKVNILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWDATNGKC-VATLTGHDDEILDS 309
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWD 302
F + L+A+ S D T ++ + H E + + + LL + D
Sbjct: 310 CFD-YTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISK-ISFNPQGNHLLTGSS-D 366
Query: 303 ELVYVW 308
+ +W
Sbjct: 367 KTARIW 372
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 51/202 (25%), Positives = 91/202 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
+ L+++ S D ++ + D +V ++D T + L H E+ SA +N
Sbjct: 222 IISLSFNTSGDRIITGSF-DHTVVVWDA---DTGRKVNILIGHCAEISSASFN-WDCSLI 276
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+T S D T KLW V T H + ++ ++ + +AS D T RI+
Sbjct: 277 LTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYT-GKLIATASADGTARIFSAATR 335
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
+ HE EI +N + L+ +S DK+ +IWD + + + VL GH +
Sbjct: 336 KCIAKLEGHEGEISKISFNPQGNHLLTGSS-DKTARIWDAQTGQC-LQVLEGHTDEIFSC 393
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
F+ ++ N++ + S D T +W
Sbjct: 394 AFN-YKGNIVITGSKDNTCRIW 414
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 204 (76.9 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 60/214 (28%), Positives = 106/214 (49%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWN 158
+R +H EV+ + ++P R + +T+S D V +W + H V + ++
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGR-TLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFS 77
Query: 159 PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218
P + S+S D ++R+WDV ++ H+ + ++ D +AS DK
Sbjct: 78 P-DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSP-DSKQLASGGWDKRAI 135
Query: 219 IWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278
+W+V++ R + +L GH +++ FSP + LA+ S+D TV +WD +V Y H
Sbjct: 136 VWEVQSGR-RVHLLVGHCDSIQSSDFSP-TSDSLATGSWDSTVHIWDLRASTPVVS-Y-H 191
Query: 279 HTEFAVGVDMSVL---VEGLLASTGWDELVYVWQ 309
+ E G ++S L GLLAS WD+ + VW+
Sbjct: 192 NLEGHTG-NISCLCYSASGLLASGSWDKTICVWK 224
Score = 202 (76.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/207 (28%), Positives = 94/207 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
S D LIA+ + D S++++D A + + L H R V + ++P + + WD
Sbjct: 77 SPDGRLIASSSSDHSIRLWDVA---RSKCLHVLKGHQRSVETVSFSPDSKQ-LASGGWDK 132
Query: 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W V V H + ++ ++P SD + S D T+ IWD+R ST ++
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPT-SDSLATGSWDSTVHIWDLR--ASTPVVS 189
Query: 190 AHEFE----ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
H E ++C L+AS S DK+I +W +P+ L GH V + FS
Sbjct: 190 YHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQ-LKGHTIWVNSLAFS 247
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDAL 272
P L AS Y TV +WD + L
Sbjct: 248 PDELKL-ASAGYSRTVKVWDCLTGKCL 273
Score = 181 (68.8 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 65/235 (27%), Positives = 105/235 (44%)
Query: 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135
L+ A DG V ++ T + + L H V S ++P R +SS D +++LW
Sbjct: 41 LLTASDDGCVYVWGTK---SGRLLWRLAGHRGPVKSCCFSPDGR-LIASSSSDHSIRLWD 96
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195
V R + K H V +++P S S D +W+V+ ++ H I
Sbjct: 97 VARSKCLHVLKGHQRSVETVSFSP-DSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSI 155
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV--LNGHGYAVRKVKFSPHRRNLLA 253
+ D++ D L A+ S D ++ IWD+R ++ L GH + + +S LLA
Sbjct: 156 QSSDFSPTSDSL-ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSAS--GLLA 212
Query: 254 SCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
S S+D T+C+W + L + HT + + S E LAS G+ V VW
Sbjct: 213 SGSWDKTICVWKPTTNN-LPLQLKGHTIWVNSLAFSP-DELKLASAGYSRTVKVW 265
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 192 (72.6 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 52/183 (28%), Positives = 85/183 (46%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWN 158
+ + H V S T D V LW++++P + + H V + N
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 159 -PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSI 217
P V S SG ++R+WD+ + H+ I + D++ Y + +AS S D +I
Sbjct: 77 TPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNI 133
Query: 218 KIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYD 277
K+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++ +
Sbjct: 134 KLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMMSEFP 190
Query: 278 HHT 280
HT
Sbjct: 191 GHT 193
Score = 129 (50.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/169 (24%), Positives = 72/169 (42%)
Query: 141 SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW 200
+V HA V + + + DC + +W + + M + H + +
Sbjct: 16 AVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 75
Query: 201 NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMT 260
N ++ LI + S SI++WD+ ++ + L GH + + F P+ +AS S D
Sbjct: 76 NTPEE-LIVAGSQSGSIRVWDLEAAKI-LRTLMGHKANICSLDFHPYGE-FVASGSQDTN 132
Query: 261 VCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
+ LWD V RY H++ AV + +G LAS D V +W
Sbjct: 133 IKLWDIR-RKGCVFRYRGHSQ-AVRC-LRFSPDGKWLASAADDHTVKLW 178
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 210 (79.0 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VDRPT---SVRTFKEHAYCVY 153
PI S H E + D++P +T + LWT D + R F H V
Sbjct: 206 PIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVE 265
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII----PAHEFEILACDWNKYDDCLIA 209
+ W+P + VF S S D ++RIWD+R S + AH+ ++ W++ + L++
Sbjct: 266 DLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLS 325
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
D ++KIWD+R ++ P+A H V V++ P + A+ D + WD
Sbjct: 326 GGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLA 384
Query: 268 VE 269
VE
Sbjct: 385 VE 386
Score = 159 (61.0 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
V DL WS + +++ + AD S++I+D A P A + + H +V+ ++ RR+
Sbjct: 264 VEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWS--RREP 321
Query: 122 FITSSWDD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
F+ S DD +K+W + + S V TFK+H V + W+P+ S VF ++ D + W
Sbjct: 322 FLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQW 381
Query: 178 DV 179
D+
Sbjct: 382 DL 383
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS----VRTFKEHAYCVYNATWNPR 160
HTR V ++PT F + S D ++++W + S + T H V +W+ R
Sbjct: 260 HTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWS-R 318
Query: 161 HSDVFCSASGDCTLRIWDVREM--GSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSI 217
S D L+IWD+R+ GS + H + + +W+ D + A++ D I
Sbjct: 319 REPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQI 378
Query: 218 KIWDVRNYRVPIA 230
WD+ R P A
Sbjct: 379 TQWDLAVERDPEA 391
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 210 (79.0 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 51/182 (28%), Positives = 82/182 (45%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS----VRTFKEHAYCVY 153
PI S H E + D++P +T V LWT S R F H V
Sbjct: 206 PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVE 265
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREM-GSTMIIP---AHEFEILACDWNKYDDCLIA 209
+ W+P VF S S D ++RIWD+R G ++ AH+ ++ W++ + L++
Sbjct: 266 DLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLS 325
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
D ++K+WD+R ++ P+A H V V++ P + A+ D + WD
Sbjct: 326 GGD-DGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLA 384
Query: 268 VE 269
VE
Sbjct: 385 VE 386
Score = 161 (61.7 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
V DL WS + D++ + AD S++I+D A P A + + H +V+ ++ RR+
Sbjct: 264 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWS--RREP 321
Query: 122 FITSSWDD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
F+ S DD +K+W + + S V TFK+H V + W+P+ S VF ++ D + W
Sbjct: 322 FLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQW 381
Query: 178 DV 179
D+
Sbjct: 382 DL 383
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTV----DRPTSVRTFKEHAYCVYNATWNPR 160
HTR V ++PT F + S D ++++W + + + T H V +W+ R
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWS-R 318
Query: 161 HSDVFCSASGDCTLRIWDVREM--GSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSI 217
S D L++WD+R+ GS + H + + +W+ D + A++ D I
Sbjct: 319 REPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQI 378
Query: 218 KIWDVRNYRVP 228
WD+ R P
Sbjct: 379 TQWDLAVERDP 389
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 199 (75.1 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 61/181 (33%), Positives = 89/181 (49%)
Query: 99 IRSLHEHTREVHSADYNP--TRRDS---FITS-SWDDTVKLW---TVDRPTSVRTFKE-- 147
I+ L HT V S +NP + D + S S D+TV++W ++ R + +T E
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDV--REMGSTMIIPAHEFEILACDWNKYDD 205
H V + W+P + +AS D T IW E + HE E+ + WN
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
Query: 206 CLIASASVDKSIKIWDVR--NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCL 263
CL A+ S DKS+ IW+V N AVL GH V+ V++ P ++L SCSYD T+ +
Sbjct: 132 CL-ATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP-TMDVLFSCSYDNTIKV 189
Query: 264 W 264
W
Sbjct: 190 W 190
Score = 163 (62.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 57/225 (25%), Positives = 103/225 (45%)
Query: 61 DGVYDLAWS--ESH----DSLLIAAVADGSVKIYDTALPPTANPIRSLHE--HTREVHSA 112
D V+ +AW+ SH +L + D +V+I++ + + +++ E HTR V S
Sbjct: 21 DRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSC 80
Query: 113 DYNPTRRDSFITSSWDDTVKLWTV--DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG 170
++P+ + T+S+D T +W + T + H V + +WN S + S
Sbjct: 81 AWSPSGQ-LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGS-CLATCSR 138
Query: 171 DCTLRIWDV---REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW----DVR 223
D ++ IW+V E ++ H ++ W+ D L S S D +IK+W D
Sbjct: 139 DKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLF-SCSYDNTIKVWWSEDDDG 197
Query: 224 NYRVPIAVL----NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 264
Y+ + L NGH V + F+ + + +CS D+T+ +W
Sbjct: 198 EYQC-VQTLGESNNGHSSTVWSISFNA-AGDKMVTCSDDLTLKIW 240
Score = 158 (60.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 50/183 (27%), Positives = 85/183 (46%)
Query: 142 VRTFKEHAYCVYNATWNP--RHSD----VFCSASGDCTLRIWDVREMG-----STMIIPA 190
++ + H V++ WNP H+D + S SGD T+RIW+ + T++
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP---IAVLNGHGYAVRKVKFSPH 247
H + +C W+ L+A+AS D + IW +NY I+ L GH V+ V ++
Sbjct: 73 HTRTVRSCAWSPSGQ-LLATASFDGTTGIW--KNYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 248 RRNLLASCSYDMTVCLWDFMV--EDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELV 305
+ LA+CS D +V +W+ + E HT+ V ++ +L S +D +
Sbjct: 130 G-SCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMD-VLFSCSYDNTI 187
Query: 306 YVW 308
VW
Sbjct: 188 KVW 190
Score = 42 (19.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 295 LLASTGWDELVYVWQQGMDP 314
LLAS D +V +WQ P
Sbjct: 333 LLASASDDGMVKIWQLATKP 352
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 167 (63.8 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 165 FCSASG-DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
F ++SG D R+WD+R + +I H ++L+ D++ + +AS D +IWD+R
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSP-NGYHLASGGEDNQCRIWDLR 202
Query: 224 NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW---DFMVEDALVGRYDHHT 280
++ + ++ H V +VK+ P R LA+ S+DM V +W DF + +LVG
Sbjct: 203 MRKL-LYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVA 261
Query: 281 EFAVGVDMS 289
+ VD S
Sbjct: 262 SLDIAVDSS 270
Score = 117 (46.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 34/133 (25%), Positives = 61/133 (45%)
Query: 104 EHTREVHSADYNPTRRDSFITSS-WDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHS 162
+ T ++ D T +F SS +D ++W + ++ F+ H V + ++P
Sbjct: 128 DRTEKIWKTD--GTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGY 185
Query: 163 DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ S D RIWD+R IIPAH + + + +A+AS D ++ IW
Sbjct: 186 HL-ASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSG 244
Query: 223 RNYRVPIAVLNGH 235
R++ + + L GH
Sbjct: 245 RDFSL-VKSLVGH 256
Score = 75 (31.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 69 SESHDS-LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW 127
S S D +L+ G K+++ +P N I L H V ++ + T+S
Sbjct: 70 SLSRDGKILVTCSLSGVPKLWE--VPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATAST 127
Query: 128 DDTVKLWTVDRPTSVRTFK 146
D T K+W D T ++TFK
Sbjct: 128 DRTEKIWKTDG-TLLQTFK 145
Score = 59 (25.8 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 123 ITSSWDDTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S KLW V + T+ + K H V + ++ + +AS D T +IW
Sbjct: 79 VTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIW 134
Score = 39 (18.8 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT 90
V D+ +S D L A D + KI+ T
Sbjct: 109 VTDVVFSSVDDECLATASTDRTEKIWKT 136
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 212 (79.7 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 57/197 (28%), Positives = 96/197 (48%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
+ H +L++ D K+ P N + + HT + ++P+ D TSS D
Sbjct: 361 QPHKDILVSCGEDRLWKVLGL---PKCNVLLTGFGHTDWLSDCCFHPSG-DKLATSSGDT 416
Query: 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
TVKLW + + + TF+ H+ V++ TW+ + V S+S D T +IWDV +
Sbjct: 417 TVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV-ASSSLDKTSKIWDVNSERCRCTLY 475
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H + + ++ + + L+ S S DK++ IWD R + L GH +++ F P R
Sbjct: 476 GHTDSVNSIEFFPFSNTLLTS-SADKTLSIWDART-GICEQSLYGHMHSINDAIFDP-RG 532
Query: 250 NLLASCSYDMTVCLWDF 266
+++ASC LWDF
Sbjct: 533 HMIASCDACGVTKLWDF 549
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 67/256 (26%), Positives = 106/256 (41%)
Query: 54 LVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSAD 113
L F D + D + S D L ++ D +VK++D + I + H+R V S
Sbjct: 388 LTGFGHTDWLSDCCFHPSGDKLATSS-GDTTVKLWDLC---KGDCILTFEGHSRAVWSCT 443
Query: 114 YNPTRRDSFI-TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ +F+ +SS D T K+W V+ T H V + + P S+ ++S D
Sbjct: 444 WHSC--GNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFP-FSNTLLTSSADK 500
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVL 232
TL IWD R + H I ++ +IAS K+WD R +PI +
Sbjct: 501 TLSIWDARTGICEQSLYGHMHSINDAIFDPRGH-MIASCDACGVTKLWDFRKL-LPIVSI 558
Query: 233 NGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292
+ +V F R +LA S + + L D ++ + + H A V S
Sbjct: 559 DIGPSPGNEVNFDSSGR-VLAQASGNGVIHLLD--LKSGEIHKLMGHENEAHTVVFSHDG 615
Query: 293 EGLLASTGWDELVYVW 308
E +L S G D V W
Sbjct: 616 E-ILFSGGSDGTVRTW 630
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 208 (78.3 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 63/195 (32%), Positives = 96/195 (49%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 132 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 191
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 192 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 248
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVD-----MSVL------VEG 294
P LL + SYD +V +WD + L R HHT+ +D MS L EG
Sbjct: 249 PDSA-LLVTASYDTSVIMWDPYTGERL--RSLHHTQLEPTMDDSDVHMSSLRSVCFSPEG 305
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 306 LYLATVADDRLLRIW 320
Score = 160 (61.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 36/148 (24%), Positives = 76/148 (51%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 125 ILATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 182 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD 221
+++CD++ D L+ +AS D S+ +WD
Sbjct: 241 SVVSCDFSP-DSALLVTASYDTSVIMWD 267
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ DV C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 112 ARHHPQAPDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 171 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 228
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTSVIMW 266
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 208 (78.3 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 74/253 (29%), Positives = 113/253 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ +P HT V S + +
Sbjct: 62 DAVTCVNFSPS-GHLLASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQ- 116
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
S +T+S D TVK+W+ R + + +H V A ++P + SAS D T+++WD
Sbjct: 117 SLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKT 175
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C IA+A +D ++K+WD R +R+ + H AV
Sbjct: 176 SRECIHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDARTHRL-LQHYQLHSAAVN 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 234 ALSFHPSG-NYLITASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 290
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 291 SDEQVMVWKSNFD 303
Score = 185 (70.2 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 63/221 (28%), Positives = 92/221 (41%)
Query: 91 ALPPTANPIRSLH--EHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEH 148
A P +P H H V D++ + + S D T+ +W + + F H
Sbjct: 2 AAPSQEDPSLERHFKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMKPQSRAYRFTGH 60
Query: 149 AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLI 208
V ++P + S S D T+RIW G + + AH + + + L+
Sbjct: 61 KDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLV 119
Query: 209 ASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMV 268
+AS DK++K+W R + L H VR KFSP R L+ S S D TV LWD
Sbjct: 120 -TASDDKTVKVWSTHRQRFLFS-LTQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTS 176
Query: 269 EDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
+ + Y H F VD G +A+ G D V VW
Sbjct: 177 REC-IHSYCEHGGFVTYVDFHP--SGTCIAAAGMDNTVKVW 214
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 47/175 (26%), Positives = 75/175 (42%)
Query: 139 PTSVRTFKEH--AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEIL 196
P+ R FK H A + + N +H S S D TL IW ++ H+ +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKH---LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVT 65
Query: 197 ACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS 256
+++ L+AS S DK+++IW V N + V H VR V F ++L+ + S
Sbjct: 66 CVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA-S 122
Query: 257 YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQ 310
D TV +W + L H + S +G L+ S D+ V +W +
Sbjct: 123 DDKTVKVWSTHRQRFLFS-LTQHINWVRCAKFSP--DGRLIVSASDDKTVKLWDK 174
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 210 (79.0 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 64/243 (26%), Positives = 117/243 (48%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
+ D L + ADGSVK++ + P+ + H+ V ++P+ R F+ T+ +D
Sbjct: 289 DKKDVNLASCAADGSVKLWSLE---SDEPVADIEGHSMRVARVMWHPSGR--FLGTTCYD 343
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTM 186
+ +LW ++ + + H+ VY+ + H+D + +G D R+WD+R M
Sbjct: 344 HSWRLWDLEAQEEILHQEGHSKGVYDIAF---HTDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H EI +++ + +A+ S D + K+WD+R R I + H V VKF P
Sbjct: 401 FLEGHLKEIYGLNFSP-NGYHVATGSGDNTCKVWDLRQ-RKCIYTIPAHQNLVTGVKFEP 458
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELV 305
+ N L + +YD T +W L H + +G+D+S+ +G L+A+ +D
Sbjct: 459 NHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGLDISL--DGQLIATCSYDRTF 515
Query: 306 YVW 308
+W
Sbjct: 516 KLW 518
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GVYD+A+ + SL D +++D T I L H +E++ +++P
Sbjct: 366 GVYDIAF-HTDGSLAGTGGLDAFGRVWDLR---TGRCIMFLEGHLKEIYGLNFSPNGYH- 420
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D+T K+W + + + T H V + P H + + + D T +IW
Sbjct: 421 VATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPG 480
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ HE +++ D + D LIA+ S D++ K+W
Sbjct: 481 WSPLKTLAGHEGKVMGLDIS-LDGQLIATCSYDRTFKLW 518
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 204 (76.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 73/253 (28%), Positives = 112/253 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V + +S S LL + D +V+I+ +P HT V S + +
Sbjct: 62 DAVTCVNFSPS-GHLLASGSRDKTVRIW---VPNVKGESTVFRAHTATVRSVHFCSDGQ- 116
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+T+S D TVK+W+ R + + +H V A ++P + SAS D T+++WD
Sbjct: 117 LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWDKT 175
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + D++ C IA+A +D ++K+WD R +R+ + H AV
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVKVWDTRTHRL-VQHYQLHSAAVN 233
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
+ F P N L + S D T+ + D M E L+ H A V S E AS G
Sbjct: 234 ALSFHPSG-NYLITASSDSTLKILDLM-EGRLLYTLHGHQGPATTVAFSRTGE-YFASGG 290
Query: 301 WDELVYVWQQGMD 313
DE V VW+ D
Sbjct: 291 SDEQVMVWKSNFD 303
Score = 189 (71.6 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 62/210 (29%), Positives = 89/210 (42%)
Query: 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
R H V D++ + + S D T+ +W + + F H V ++P
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ S S D T+RIW G + + AH + + + D L+ +AS DK++K+
Sbjct: 72 S-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQLLVTASDDKTVKV 129
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH 279
W R + L H VR KFSP R L+ S S D TV LWD + V Y H
Sbjct: 130 WSTHRQRFLFS-LTQHINWVRCAKFSPDGR-LIVSASDDKTVKLWDKTSREC-VHSYCEH 186
Query: 280 TEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
F VD G +A+ G D V VW
Sbjct: 187 GGFVTYVDFHP--SGTCIAAAGMDNTVKVW 214
Score = 124 (48.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 48/175 (27%), Positives = 74/175 (42%)
Query: 139 PTSVRTFKEH--AYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEIL 196
P+ R FK H A + + N +H S S D TL IW ++ H+ +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKH---LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVT 65
Query: 197 ACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS 256
+++ L+AS S DK+++IW V N + V H VR V F + LL + S
Sbjct: 66 CVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQ-LLVTAS 122
Query: 257 YDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQ 310
D TV +W + L H + S +G L+ S D+ V +W +
Sbjct: 123 DDKTVKVWSTHRQRFLFS-LTQHINWVRCAKFSP--DGRLIVSASDDKTVKLWDK 174
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 208 (78.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 51/182 (28%), Positives = 85/182 (46%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VDRPT-SV--RTFKEHAYCVY 153
PI S H E + D++P +T + LWT D + +V R F H V
Sbjct: 205 PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVE 264
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREM-GSTMIIP---AHEFEILACDWNKYDDCLIA 209
+ W+P VF S S D ++RIWD+R G ++ AH+ ++ W++ + L++
Sbjct: 265 DLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLLS 324
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
D ++K+WD+R ++ P+A H V V++ P + A+ D + WD
Sbjct: 325 GGD-DGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLA 383
Query: 268 VE 269
VE
Sbjct: 384 VE 385
Score = 167 (63.8 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 40/122 (32%), Positives = 67/122 (54%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
V DL WS + D++ + AD S++I+D A P A + + H +V+ ++ RR+
Sbjct: 263 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWS--RREP 320
Query: 122 FITSSWDD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
F+ S DD T+K+W + + S V TFK+H V + W+P+ S VF ++ D + W
Sbjct: 321 FLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 380
Query: 178 DV 179
D+
Sbjct: 381 DL 382
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/131 (25%), Positives = 59/131 (45%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTV----DRPTSVRTFKEHAYCVYNATWNPR 160
HTR V ++PT F + S D ++++W + + + T H V +W+ R
Sbjct: 259 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWS-R 317
Query: 161 HSDVFCSASGDCTLRIWDVREM--GSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSI 217
S D TL++WD+R+ GS + H + + +W+ D + A++ D I
Sbjct: 318 REPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQI 377
Query: 218 KIWDVRNYRVP 228
WD+ R P
Sbjct: 378 TQWDLAVERDP 388
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 208 (78.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 57/206 (27%), Positives = 92/206 (44%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VDRPT---SVRTFKEHAYCVY 153
PI + H E + D++P +T + LWT D + R F H V
Sbjct: 205 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVE 264
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGST---MIIPA-HEFEILACDWNKYDDCLIA 209
+ W+P VF S S D ++RIWD+R S + PA H ++ W++ + L++
Sbjct: 265 DLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFLLS 324
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
D ++K+WD+R ++ P+A H V V++ P + A+ D + WD
Sbjct: 325 GGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLA 383
Query: 268 VE-DALVGRYDHHTEFA-VGVDMSVL 291
VE D G D T+ VG+ +L
Sbjct: 384 VERDPEAG--DTETDPGLVGLPQQLL 407
Score = 158 (60.7 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
V DL WS + D++ + AD S++I+D A P A + + H +V+ ++ R++
Sbjct: 263 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWS--RQEP 320
Query: 122 FITSSWDD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
F+ S DD +K+W + + S V TFK+H V + W+P+ S VF ++ D + W
Sbjct: 321 FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 380
Query: 178 DV 179
D+
Sbjct: 381 DL 382
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 209 (78.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/265 (27%), Positives = 112/265 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH-----------TREVHS 111
V+ AW+ D LL + D + +I++ + T+ P + + H ++V S
Sbjct: 172 VFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTS 230
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
D+N + T S+D ++WT D + T +H ++ WN + + + SA D
Sbjct: 231 LDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNFIL-SAGVD 287
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
T IWD + P H L DW + AS S D I + + R PI
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHVCKLGQDR-PIKT 344
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL 291
GH V +K+ P NLLASCS DMT+ +W M +D V H + + S
Sbjct: 345 FQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWS-MKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 292 VEG--------LLASTGWDELVYVW 308
G +LAS +D V +W
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLW 427
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ L W++ + +L A V D + I+D T + H+ D+ ++F
Sbjct: 269 IFALKWNKKGNFILSAGV-DKTTIIWDAH---TGEAKQQFPFHSAPALDVDWQSN--NTF 322
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D + + + + ++TF+ H V W+P ++ S S D TL+IW +++
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD 381
Query: 183 GSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+ AH EI W N + ++ASAS D ++++WDV + + I L
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTK 440
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
H V V FSP R LAS S+D V +W+ ALV Y
Sbjct: 441 HQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/256 (25%), Positives = 111/256 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 228 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 280
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 338
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++KIW ++ + L H +
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC-VHDLQAHNKEIYT 396
Query: 242 VKFSPH-------RRNL-LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
+K+SP NL LAS S+D TV LWD + + H E V S +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVYSVAFSP--D 453
Query: 294 G-LLASTGWDELVYVW 308
G LAS +D+ V++W
Sbjct: 454 GRYLASGSFDKCVHIW 469
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 39 VHVLDLSPAAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
+HV L P T F + V + W + +LL + D ++KI+ N
Sbjct: 331 IHVCKLGQDRPIKT----FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD---N 382
Query: 98 PIRSLHEHTREVHSADYNPTRRDS--------FITSSWDDTVKLWTVDRPTSVRTFKEHA 149
+ L H +E+++ ++PT + ++S+D TV+LW VDR + T +H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA 209
VY+ ++P S S D + IW+ + G+ + I WN D + A
Sbjct: 443 EPVYSVAFSP-DGRYLASGSFDKCVHIWNT-QTGALVHSYRGTGGIFEVCWNAAGDKVGA 500
Query: 210 SASVDKSIKIWDVR 223
SAS D S+ + D+R
Sbjct: 501 SAS-DGSVCVLDLR 513
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 209 (78.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/265 (27%), Positives = 112/265 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH-----------TREVHS 111
V+ AW+ D LL + D + +I++ + T+ P + + H ++V S
Sbjct: 172 VFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTS 230
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
D+N + T S+D ++WT D + T +H ++ WN + + + SA D
Sbjct: 231 LDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNFIL-SAGVD 287
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
T IWD + P H L DW + AS S D I + + R PI
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHVCKLGQDR-PIKT 344
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL 291
GH V +K+ P NLLASCS DMT+ +W M +D V H + + S
Sbjct: 345 FQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWS-MKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 292 VEG--------LLASTGWDELVYVW 308
G +LAS +D V +W
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLW 427
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ L W++ + +L A V D + I+D T + H+ D+ ++F
Sbjct: 269 IFALKWNKKGNFILSAGV-DKTTIIWDAH---TGEAKQQFPFHSAPALDVDWQSN--NTF 322
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D + + + + ++TF+ H V W+P ++ S S D TL+IW +++
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD 381
Query: 183 GSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+ AH EI W N + ++ASAS D ++++WDV + + I L
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTK 440
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
H V V FSP R LAS S+D V +W+ ALV Y
Sbjct: 441 HQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/256 (25%), Positives = 111/256 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 228 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 280
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 338
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++KIW ++ + L H +
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC-VHDLQAHNKEIYT 396
Query: 242 VKFSPH-------RRNL-LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
+K+SP NL LAS S+D TV LWD + + H E V S +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVYSVAFSP--D 453
Query: 294 G-LLASTGWDELVYVW 308
G LAS +D+ V++W
Sbjct: 454 GRYLASGSFDKCVHIW 469
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 39 VHVLDLSPAAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
+HV L P T F + V + W + +LL + D ++KI+ N
Sbjct: 331 IHVCKLGQDRPIKT----FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD---N 382
Query: 98 PIRSLHEHTREVHSADYNPTRRDS--------FITSSWDDTVKLWTVDRPTSVRTFKEHA 149
+ L H +E+++ ++PT + ++S+D TV+LW VDR + T +H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA 209
VY+ ++P S S D + IW+ + G+ + I WN D + A
Sbjct: 443 EPVYSVAFSP-DGRYLASGSFDKCVHIWNT-QTGALVHSYRGTGGIFEVCWNAAGDKVGA 500
Query: 210 SASVDKSIKIWDVR 223
SAS D S+ + D+R
Sbjct: 501 SAS-DGSVCVLDLR 513
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 207 (77.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VDRPT---SVRTFKEHAYCVY 153
PI + H E + D++P +T + LWT D + R F H V
Sbjct: 200 PIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVE 259
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII----PAHEFEILACDWNKYDDCLIA 209
+ W+P VF S S D ++RIWD+R S + AH+ ++ +W++ + L++
Sbjct: 260 DLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFLLS 319
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
D ++KIWD+R ++ P+A H + V++ P + A+ D + WD
Sbjct: 320 GGD-DGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLA 378
Query: 268 VE 269
VE
Sbjct: 379 VE 380
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
V DL WS + D++ + AD S++I+D A P A + + H +V+ +++ RR+
Sbjct: 258 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWS--RREP 315
Query: 122 FITSSWDD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
F+ S DD +K+W + + S V TFK+H + + W+P+ S VF ++ D + W
Sbjct: 316 FLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQW 375
Query: 178 DV 179
D+
Sbjct: 376 DL 377
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS----VRTFKEHAYCVYNATWNPR 160
HTR V ++PT F + S D ++++W + S + T H V W+ R
Sbjct: 254 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWS-R 312
Query: 161 HSDVFCSASGDCTLRIWDVREM--GSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSI 217
S D L+IWD+R+ GS + H I + +W+ D + A++ D I
Sbjct: 313 REPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQI 372
Query: 218 KIWDVRNYRVPIA 230
WD+ R P A
Sbjct: 373 TQWDLAVERDPEA 385
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 47/192 (24%), Positives = 76/192 (39%)
Query: 138 RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC--TLRIWDVREMGSTMI----IPAH 191
R + TF H + W+PR S + GDC + +W + GS + H
Sbjct: 197 RVKPIFTFAGHMGEGFALDWSPRVSGRLLT--GDCQKNIHLWTPTDGGSWHVDQRPFMGH 254
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVR---NYRVPIAVLNGHGYAVRKVKFSPHR 248
+ W+ +D + AS S D SI+IWD+R + + + H V + +S R
Sbjct: 255 TRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWS-RR 313
Query: 249 RNLLASCSYDMTVCLWDF--MVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVY 306
L S D + +WD + V + H V+ G+ A++G D +
Sbjct: 314 EPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQIT 373
Query: 307 VWQQGM--DPRA 316
W + DP A
Sbjct: 374 QWDLAVERDPEA 385
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 207 (77.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 55/184 (29%), Positives = 86/184 (46%)
Query: 96 ANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VDRPT---SVRTFKEHAYC 151
A P+ + H +E + D++P+ T + +WT V+ T R H+
Sbjct: 212 ARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQS 271
Query: 152 VYNATWNPRHSDVFCSASGDCTLRIWDVRE--MGSTMII--PAHEFEILACDWNKYDDCL 207
V + W+P V S S D T+RIWD R + M+ AH+ ++ WN+ ++
Sbjct: 272 VEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNR-NEPF 330
Query: 208 IASASVDKSIKIWDVRNY--RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
IAS D + IWD+R + + PIA H + V++SP +LAS D + LWD
Sbjct: 331 IASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWD 390
Query: 266 FMVE 269
VE
Sbjct: 391 LAVE 394
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 49/186 (26%), Positives = 79/186 (42%)
Query: 138 RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCT--LRIWDVREMGSTMI----IPAH 191
RP V TF H + W+P V A+GDC + +W E G+ + + H
Sbjct: 213 RP--VFTFGGHQQEGFAIDWSPSADGVL--ATGDCRRDIHVWTPVEDGTWKVDQRPLAGH 268
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN- 250
+ W+ + ++AS SVDK+I+IWD R +L V RN
Sbjct: 269 SQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNE 328
Query: 251 -LLASCSYDMTVCLWDFMVEDAL--VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYV 307
+AS D + +WD + + + HHT+ V+ S +LAS G D+ + +
Sbjct: 329 PFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIAL 388
Query: 308 WQQGMD 313
W ++
Sbjct: 389 WDLAVE 394
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/166 (27%), Positives = 73/166 (43%)
Query: 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTR 118
+ V DL WS + S+L + D +++I+D A P A + H +V+ +N R
Sbjct: 269 SQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN--R 326
Query: 119 RDSFITSSWDDT-VKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTL 174
+ FI S DD + +W + + S + TFK H + W+P + V S D +
Sbjct: 327 NEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQI 386
Query: 175 RIWD--VREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218
+WD V + + PA ++L NK L+ K IK
Sbjct: 387 ALWDLAVEKDIDQAVDPAQNEDVL----NKLPPQLLFIHQGQKEIK 428
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 53/192 (27%), Positives = 91/192 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S I D + K++DTA + + +L H V++ +N D T S+D T KL
Sbjct: 105 SCFITGSYDRTCKVWDTA---SGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W+ + TF+ H + ++NP+ S V + S D T ++WD++ + + H
Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQ-STVVATGSMDTTAKLWDIQSGEEVVTLTGHLA 220
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
EI++ ++ D +I + S D ++ +WD R + L GH + FS +L+
Sbjct: 221 EIISLSFDTSGDRII-TGSFDHTVVVWDASTGR-KVHTLIGHCAEISSALFS-WDCSLIL 277
Query: 254 SCSYDMTVCLWD 265
+ S D T LWD
Sbjct: 278 TGSMDKTCMLWD 289
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 48/187 (25%), Positives = 82/187 (43%)
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
FIT S+D T K+W + T + H VY +N + D + S D T ++W E
Sbjct: 107 FITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSA-E 165
Query: 182 MGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
G H EI+ +N ++A+ S+D + K+WD+++ + L GH +
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNP-QSTVVATGSMDTTAKLWDIQSGE-EVVTLTGHLAEII 223
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGV---DMSVLVEGLLA 297
+ F ++ S+D TV +WD + H E + + D S+++ G +
Sbjct: 224 SLSFDTSGDRIITG-SFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMD 282
Query: 298 STG--WD 302
T WD
Sbjct: 283 KTCMLWD 289
Score = 171 (65.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 53/193 (27%), Positives = 85/193 (44%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
D + K++D + + +L H E+ S ++ T D IT S+D TV +W
Sbjct: 198 DTTAKLWDIQ---SGEEVVTLTGHLAEIISLSFD-TSGDRIITGSFDHTVVVWDASTGRK 253
Query: 142 VRTFKEHAYCVYNA--TWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
V T H + +A +W+ + + S D T +WD + H+ EIL
Sbjct: 254 VHTLIGHCAEISSALFSWD---CSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSC 310
Query: 200 WNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM 259
++ Y LIA+AS D + ++++ R I L GH + K+ F+P LL S D
Sbjct: 311 FD-YTGKLIATASADGTARVYNATT-RKCITKLEGHEGEISKISFNPQGNRLLTGSS-DK 367
Query: 260 TVCLWDFMVEDAL 272
T +WD L
Sbjct: 368 TARIWDVQTGQCL 380
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/147 (23%), Positives = 69/147 (46%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
SL++ D + ++D + + +L H E+ + ++ T + T+S D T ++
Sbjct: 274 SLILTGSMDKTCMLWDAT---SGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARV 329
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+ + + H + ++NP+ + + + S D T RIWDV+ ++ H
Sbjct: 330 YNATTRKCITKLEGHEGEISKISFNPQGNRLL-TGSSDKTARIWDVQTGQCLQVLEGHTD 388
Query: 194 EILACDWNKYDDCLIASASVDKSIKIW 220
EI +C +N Y ++ + S D S +IW
Sbjct: 389 EIFSCAFN-YKGNIVITGSKDNSCRIW 414
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 208 (78.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 65/243 (26%), Positives = 114/243 (46%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
+ D L + ADGSVK++ + P+ + HT V ++P+ R F+ T+ +D
Sbjct: 289 DQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVTWHPSGR--FLGTTCYD 343
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTM 186
+ +LW ++ + + H+ VY+ + H D + +G D R+WD+R M
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMGVYDIAF---HQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H EI +++ + IA+ S D + K+WD+R R + + H V VKF P
Sbjct: 401 FLEGHLKEIYGINFSP-NGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEP 458
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELV 305
N L + +YD T +W L H + +G+D+S +G L+A+ +D
Sbjct: 459 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGLDISS--DGQLIATCSYDRTF 515
Query: 306 YVW 308
+W
Sbjct: 516 KLW 518
Score = 173 (66.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 60/252 (23%), Positives = 104/252 (41%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT------RRDSFITS 125
+ +L A G K++ P N + +L H V + ++P ++D + S
Sbjct: 241 NSKMLATACWSGLCKLWSV---PDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 297
Query: 126 -SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG 183
+ D +VKLW++D V + H V TW+P S F + D + R+WD+
Sbjct: 298 CAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHP--SGRFLGTTCYDRSWRLWDLEAQE 355
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ H + +++ D L + +D ++WD+R R I L GH + +
Sbjct: 356 EILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGIN 413
Query: 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303
FSP+ ++ A+ S D T +WD + V H GV + L + +D
Sbjct: 414 FSPNGYHI-ATGSGDNTCKVWDLR-QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 471
Query: 304 LVYVWQQ-GMDP 314
+W G P
Sbjct: 472 TAKIWTHPGWSP 483
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GVYD+A+ + SL D +++D T I L H +E++ +++P
Sbjct: 366 GVYDIAFHQD-GSLAGTGGLDAFGRVWDLR---TGRCIMFLEGHLKEIYGINFSPNGYH- 420
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D+T K+W + + V T H V + P H + + + D T +IW
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 480
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ HE +++ D + D LIA+ S D++ K+W
Sbjct: 481 WSPLKTLAGHEGKVMGLDISS-DGQLIATCSYDRTFKLW 518
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 200 (75.5 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 65/248 (26%), Positives = 110/248 (44%)
Query: 71 SHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT 130
++D L+A +V++YD NP+ S H V S + R +TSS D T
Sbjct: 41 TNDKKLLATAGHQNVRLYDIRTT-NPNPVASFEGHRGNVTSVSFQQDNR-WMVTSSEDGT 98
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST-MIIP 189
+K+W V P+ R +K +A V +P ++ S D +RIWD+ E T + P
Sbjct: 99 IKVWDVRSPSIPRNYKHNAP-VNEVVIHPNQGELI-SCDRDGNIRIWDLGENQCTHQLTP 156
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYAVRKVKF 244
+ + + D ++A+A+ + +W++ N+ P+ H + ++
Sbjct: 157 EDDTSLQSLSMAS-DGSMLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILL 215
Query: 245 SPHRRNLLASCSYDMTVCLW----DFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG 300
S ++L A+CS D T +W DF +E L G + A D + LV AS+
Sbjct: 216 SSDVKHL-ATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVT---ASS- 270
Query: 301 WDELVYVW 308
D V +W
Sbjct: 271 -DHYVRLW 277
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 205 (77.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 62/195 (31%), Positives = 96/195 (49%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 132 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 191
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 192 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 248
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS-VLV----------EG 294
P LL + SYD V +WD + L R HHT+ + +D S V + EG
Sbjct: 249 PDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQLSPPMDDSDVHISSLRSVCFSPEG 305
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 306 LYLATVADDRLLRIW 320
Score = 158 (60.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 47/202 (23%), Positives = 98/202 (48%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 125 ILATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 182 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD------VRNYR-----VPIAVLNGHGYAVRKV 242
+++CD++ D L+ +AS D ++ +WD +R+ P+ + H ++R V
Sbjct: 241 SVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSV 299
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
FSP LA+ + D + +W
Sbjct: 300 CFSPEGL-YLATVADDRLLRIW 320
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ DV C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 112 ARHHPQVPDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 171 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 228
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTNVIMW 266
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 207 (77.9 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 64/242 (26%), Positives = 115/242 (47%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
E D + + ADGSVK++ + PI + H+ V ++P+ R F+ T+ +D
Sbjct: 275 EESDVNMASCAADGSVKLWSL---DSDEPIADIEGHSMRVARVTWHPSGR--FLGTTCYD 329
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMGSTMI 187
+ +LW ++ + + H+ V++ ++P S G D R+WD+R M
Sbjct: 330 HSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGS--LAGTGGLDSFARVWDLRTGRCVMF 387
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
+ H EI + +++ + +A+ S D + K+WD+R R I + H V VKF P+
Sbjct: 388 LEGHIKEIYSINFSP-NGFHVATGSGDNACKVWDLRQRRC-IYTIPAHQNLVSSVKFQPN 445
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVY 306
+ L + +YD T +W L H + +GVD+S +G L+A+ +D
Sbjct: 446 DGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGVDLSP--DGQLIATCSYDRTFK 502
Query: 307 VW 308
+W
Sbjct: 503 LW 504
Score = 155 (59.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 57/252 (22%), Positives = 102/252 (40%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNP----TRRDSFI---T 124
+ LL+ A G K++ P IR+L H V + ++P T +S + +
Sbjct: 227 NSKLLVTASWSGLCKLWKV---PDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMAS 283
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG 183
+ D +VKLW++D + + H+ V TW+P S F + D + R+WD+
Sbjct: 284 CAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHP--SGRFLGTTCYDHSWRLWDLEVQE 341
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ H + ++ D L + +D ++WD+R R + L GH + +
Sbjct: 342 EILHQEGHSKGVHDLHFHP-DGSLAGTGGLDSFARVWDLRTGRC-VMFLEGHIKEIYSIN 399
Query: 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303
FSP+ ++ A+ S D +WD + + H V L + +D
Sbjct: 400 FSPNGFHV-ATGSGDNACKVWDLR-QRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDN 457
Query: 304 LVYVWQQ-GMDP 314
+W G P
Sbjct: 458 TAKIWTHPGWSP 469
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 54/176 (30%), Positives = 81/176 (46%)
Query: 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSA--SGDCTLRIWDVREMGSTMIIPAHEFE 194
DRP S F ++ + A+W+ C DCTL I +R G + A F
Sbjct: 216 DRPISYCQFSPNSKLLVTASWSG-----LCKLWKVPDCTL-IRTLR--GHNTNVGAISFH 267
Query: 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254
A + D +AS + D S+K+W + + PIA + GH V +V + P R L +
Sbjct: 268 PQATLTLEESDVNMASCAADGSVKLWSLDSDE-PIADIEGHSMRVARVTWHPSGRFLGTT 326
Query: 255 CSYDMTVCLWDFMVEDALVGRYDHHTEFAVGV-DMSVLVEGLLASTGW-DELVYVW 308
C YD + LWD V++ ++ + H + GV D+ +G LA TG D VW
Sbjct: 327 C-YDHSWRLWDLEVQEEILHQEGH----SKGVHDLHFHPDGSLAGTGGLDSFARVW 377
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 71/266 (26%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D + T R L HT V Y+
Sbjct: 202 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKS---TLECKRILTGHTGSVLCLQYDER 255
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 256 ---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 309
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 365
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 366 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 421
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 422 SG-----AYDGKIKVWDLIAALDPRA 442
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 293 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 348
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 349 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 404
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV---RNYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 405 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFR 461
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 462 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 488
Score = 178 (67.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D T + +L H V +N +T S D ++
Sbjct: 254 ERVIITGSSDSTVRVWDVN---TGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIA 307
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 308 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 364
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 365 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 419
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD + D A G T E + V E + S+ D+
Sbjct: 420 --IVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 477
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 478 ILIWDFLNDPAA 489
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 71/266 (26%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D + T R L HT V Y+
Sbjct: 202 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKS---TLECKRILTGHTGSVLCLQYDER 255
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 256 ---VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 309
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 365
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 366 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 421
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 422 SG-----AYDGKIKVWDLMAALDPRA 442
Score = 193 (73.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 293 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 348
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 349 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 404
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVR---NYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 405 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 461
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 462 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 488
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 208 (78.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 70/260 (26%), Positives = 120/260 (46%)
Query: 57 FDTADGVYDLAWSESHDSLLIAAVADGSVKIYD--TALPPTAN---PIRSLHEHTREVHS 111
F +A+ V + + D L A +K++D + + A+ PI + ++ +
Sbjct: 368 FHSANIVSSIEFDRD-DELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSK-LSC 425
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
+N ++ +S ++ V +W V S+ ++EH ++ ++ + S S D
Sbjct: 426 LSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDD 485
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
C +++W R+ S + I + I +N IA S D I +D+RN P+ V
Sbjct: 486 CKVKVWCTRQEASVINIDM-KANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHV 544
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL-VGRYDHHTEFAVGVDMSV 290
+GH AV VKF + N LAS S D T+ LWD V+D L V + HT V ++V
Sbjct: 545 FSGHKKAVSYVKFLSN--NELASASTDSTLRLWD--VKDNLPVRTFRGHTNEKNFVGLTV 600
Query: 291 LVEGLLASTGWDELVYVWQQ 310
E L + +E VYV+ +
Sbjct: 601 NSEYLACGSETNE-VYVYHK 619
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 50/213 (23%), Positives = 95/213 (44%)
Query: 31 FGILGNGR-VHVLDLSPAA--PALTE--LVAFDTADGVYDLAWSESHDSLLIAAVADGSV 85
F G R + V D S PA + +V T + L+W++ + + ++ +G V
Sbjct: 386 FATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIV 445
Query: 86 KIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTF 145
++D T + EH + S D++ T ++ S D VK+W + SV
Sbjct: 446 TVWDVT---TRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINI 502
Query: 146 --KEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNK 202
K + CV +NP S+ S D + +D+R + + + H+ + +
Sbjct: 503 DMKANICCV---KYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLS 559
Query: 203 YDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH 235
++ +ASAS D ++++WDV++ +P+ GH
Sbjct: 560 NNE--LASASTDSTLRLWDVKD-NLPVRTFRGH 589
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 72/265 (27%), Positives = 112/265 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH-----------TREVHS 111
V+ AW+ D LL + D + +I++ + T+ + + H ++V S
Sbjct: 172 VFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTS 230
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
D+N + T S+D ++WT D + T +H ++ WN + + + SA D
Sbjct: 231 LDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNFIL-SAGVD 287
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
T IWD + + P H L DW + AS S D I + + R PI
Sbjct: 288 KTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNT--FASCSTDMCIHVCKLGQDR-PIKT 344
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL 291
GH V +K+ P NLLASCS DMT+ +W M +D V H + + S
Sbjct: 345 FQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWS-MKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 292 VEG--------LLASTGWDELVYVW 308
G +LAS +D V +W
Sbjct: 403 GPGTSNPNANLMLASASFDSTVRLW 427
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ L W++ + +L A V D + I+D T + H+ D+ ++F
Sbjct: 269 IFALKWNKKGNFILSAGV-DKTTIIWDAH---TGEAKQLFPFHSAPALDVDWQSN--NTF 322
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D + + + + ++TF+ H V W+P ++ S S D TL+IW +++
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD 381
Query: 183 GSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+ AH EI W N + ++ASAS D ++++WDV + + I L
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDV-DRGICIHTLTK 440
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
H V V FSP R LAS S+D V +W+ ALV Y
Sbjct: 441 HQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/256 (25%), Positives = 111/256 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 228 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 280
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 338
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++KIW ++ + L H +
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC-VHDLQAHNKEIYT 396
Query: 242 VKFSPH-------RRNL-LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
+K+SP NL LAS S+D TV LWD + + H E V S +
Sbjct: 397 IKWSPTGPGTSNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVYSVAFSP--D 453
Query: 294 G-LLASTGWDELVYVW 308
G LAS +D+ V++W
Sbjct: 454 GRYLASGSFDKCVHIW 469
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 39 VHVLDLSPAAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
+HV L P T F + V + W + +LL + D ++KI+ N
Sbjct: 331 IHVCKLGQDRPIKT----FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD---N 382
Query: 98 PIRSLHEHTREVHSADYNPTRRDS--------FITSSWDDTVKLWTVDRPTSVRTFKEHA 149
+ L H +E+++ ++PT + ++S+D TV+LW VDR + T +H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA 209
VY+ ++P S S D + IW+ + G+ + I WN D + A
Sbjct: 443 EPVYSVAFSP-DGRYLASGSFDKCVHIWNT-QTGALVHSYRGTGGIFEVCWNAAGDKVGA 500
Query: 210 SASVDKSIKIWDVR 223
SAS D S+ + D+R
Sbjct: 501 SAS-DGSVCVLDLR 513
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 65/243 (26%), Positives = 114/243 (46%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
+ D L + ADGSVK++ + P+ + HT V ++P+ R F+ T+ +D
Sbjct: 305 DQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGR--FLGTTCYD 359
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTM 186
+ +LW ++ + + H+ VY+ + H D + +G D R+WD+R M
Sbjct: 360 RSWRLWDLEAQEEILHQEGHSMGVYDIAF---HQDGSLAGTGGLDAFGRVWDLRTGRCIM 416
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H EI +++ + IA+ S D + K+WD+R R + + H V VKF P
Sbjct: 417 FLEGHLKEIYGINFSP-NGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEP 474
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELV 305
N L + +YD T +W L H + +G+D+S +G L+A+ +D
Sbjct: 475 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGLDISS--DGQLIATCSYDRTF 531
Query: 306 YVW 308
+W
Sbjct: 532 KLW 534
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 59/252 (23%), Positives = 103/252 (40%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT------RRDSFITS 125
+ +L A G K++ P N + +L H V + ++P ++D + S
Sbjct: 257 NSKMLATACWSGLCKLWSV---PDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 313
Query: 126 -SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG 183
+ D +VKLW++D V + H V W+P S F + D + R+WD+
Sbjct: 314 CAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQE 371
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ H + +++ D L + +D ++WD+R R I L GH + +
Sbjct: 372 EILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGIN 429
Query: 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303
FSP+ ++ A+ S D T +WD + V H GV + L + +D
Sbjct: 430 FSPNGYHI-ATGSGDNTCKVWDLR-QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 487
Query: 304 LVYVWQQ-GMDP 314
+W G P
Sbjct: 488 TAKIWTHPGWSP 499
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GVYD+A+ + SL D +++D T I L H +E++ +++P
Sbjct: 382 GVYDIAFHQD-GSLAGTGGLDAFGRVWDLR---TGRCIMFLEGHLKEIYGINFSPNGYH- 436
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D+T K+W + + V T H V + P H + + + D T +IW
Sbjct: 437 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 496
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ HE +++ D + D LIA+ S D++ K+W
Sbjct: 497 WSPLKTLAGHEGKVMGLDISS-DGQLIATCSYDRTFKLW 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 65/243 (26%), Positives = 114/243 (46%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
+ D L + ADGSVK++ + P+ + HT V ++P+ R F+ T+ +D
Sbjct: 307 DQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGR--FLGTTCYD 361
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTM 186
+ +LW ++ + + H+ VY+ + H D + +G D R+WD+R M
Sbjct: 362 RSWRLWDLEAQEEILHQEGHSMGVYDIAF---HQDGSLAGTGGLDAFGRVWDLRTGRCIM 418
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H EI +++ + IA+ S D + K+WD+R R + + H V VKF P
Sbjct: 419 FLEGHLKEIYGINFSP-NGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEP 476
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELV 305
N L + +YD T +W L H + +G+D+S +G L+A+ +D
Sbjct: 477 IHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGLDISS--DGQLIATCSYDRTF 533
Query: 306 YVW 308
+W
Sbjct: 534 KLW 536
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 59/252 (23%), Positives = 103/252 (40%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT------RRDSFITS 125
+ +L A G K++ P N + +L H V + ++P ++D + S
Sbjct: 259 NSKMLATACWSGLCKLWSV---PDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 315
Query: 126 -SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG 183
+ D +VKLW++D V + H V W+P S F + D + R+WD+
Sbjct: 316 CAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQE 373
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ H + +++ D L + +D ++WD+R R I L GH + +
Sbjct: 374 EILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGIN 431
Query: 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303
FSP+ ++ A+ S D T +WD + V H GV + L + +D
Sbjct: 432 FSPNGYHI-ATGSGDNTCKVWDLR-QRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDN 489
Query: 304 LVYVWQQ-GMDP 314
+W G P
Sbjct: 490 TAKIWTHPGWSP 501
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GVYD+A+ + SL D +++D T I L H +E++ +++P
Sbjct: 384 GVYDIAFHQD-GSLAGTGGLDAFGRVWDLR---TGRCIMFLEGHLKEIYGINFSPNGYH- 438
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D+T K+W + + V T H V + P H + + + D T +IW
Sbjct: 439 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 498
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ HE +++ D + D LIA+ S D++ K+W
Sbjct: 499 WSPLKTLAGHEGKVMGLDISS-DGQLIATCSYDRTFKLW 536
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 199 (75.1 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 14 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 71
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 130
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 131 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 188
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 189 PPVSFVKFSPNGKYILAAT-LDNTLKLW 215
Score = 192 (72.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 65/258 (25%), Positives = 124/258 (48%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 63 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 117
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 118 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 176
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + GH
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTGHK 230
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 231 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHP-TE 287
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 288 NIIASAALENDKTIKLWK 305
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 206 (77.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 65/272 (23%), Positives = 126/272 (46%)
Query: 49 PALTELVAF--DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHT 106
P +T +A D + D+ +S D L A+ AD + K++ T +++ H
Sbjct: 285 PQVTNTIAVLKDHKERATDVVFSPVDDCLATAS-ADRTAKLWKT----DGTLLQTFEGHL 339
Query: 107 REVHSADYNPTRRDSFI-TSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVF 165
+ ++P+ + ++ T+S+D T +LW ++ + + H+ VY + + +
Sbjct: 340 DRLARVAFHPSGK--YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQ-QDGALA 396
Query: 166 CSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNY 225
S D R+WD+R S ++ H + + +++ + +AS D +IWD+R
Sbjct: 397 ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSP-NGYHLASGGEDNQCRIWDLR-M 454
Query: 226 RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW---DFMVEDALVGRYDHHTEF 282
R + ++ H V +VK+ P LA+ SYDM V +W DF + +L G H ++
Sbjct: 455 RKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAG---HESKV 511
Query: 283 AVGVDMSVLVEGLLASTGWDELVYVW-QQGMD 313
A +D++ +A+ D + +W G D
Sbjct: 512 A-SLDITA-DSSCIATVSHDRTIKLWTSSGND 541
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 208 (78.3 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 56/214 (26%), Positives = 102/214 (47%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T++ + LH H+ V+ ++P R + ++SS D T++LW++ T + +K H Y V++
Sbjct: 488 TSSESKILHGHSGPVYGVSFSPDR-NYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWD 546
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
++P F S D R+W I H ++ ++ + +A+ S D
Sbjct: 547 TQFSP-FGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN-YVATGSSD 604
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+++++WDV N + + GH + + FSP+ + LAS S D V LWD + ++
Sbjct: 605 RTVRLWDVLNGNC-VRIFTGHKGPIHSLAFSPNGK-FLASGSTDGRVLLWD-IGHGLMIA 661
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT + S E ++AS D V +W
Sbjct: 662 ELKGHTGTIYALKFSRDGE-IIASGSIDNTVRLW 694
Score = 188 (71.2 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 56/205 (27%), Positives = 96/205 (46%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
VY +++S + LL ++ DG+++++ T + H V ++P F
Sbjct: 502 VYGVSFSPDRNYLLSSS-EDGTIRLWSLQ---TFTCLVGYKGHNYPVWDTQFSPFGY-YF 556
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
++ D +LW D +R F H V ++P +S+ + S D T+R+WDV
Sbjct: 557 VSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP-NSNYVATGSSDRTVRLWDVLNG 615
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
I H+ I + ++ + +AS S D + +WD+ + + IA L GH + +
Sbjct: 616 NCVRIFTGHKGPIHSLAFSP-NGKFLASGSTDGRVLLWDI-GHGLMIAELKGHTGTIYAL 673
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFM 267
KFS ++AS S D TV LWD M
Sbjct: 674 KFS-RDGEIIASGSIDNTVRLWDVM 697
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 206 (77.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 71/266 (26%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D + T R L HT V Y+
Sbjct: 265 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKS---TLECKRILTGHTGSVLCLQYDER 318
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 319 ---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 372
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 373 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 428
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 429 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 484
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 485 SG-----AYDGKIKVWDLVAALDPRA 505
Score = 192 (72.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 356 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 411
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 412 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 467
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV---RNYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 468 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 524
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 525 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 551
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D T + +L H V +N +T S D ++
Sbjct: 317 ERVIITGSSDSTVRVWDVN---TGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIA 370
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 371 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 427
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 428 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 482
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD + D A G T E + V E + S+ D+
Sbjct: 483 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 540
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 541 ILIWDFLNDPAA 552
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 203 (76.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 62/195 (31%), Positives = 95/195 (48%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 132 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 191
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 192 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 248
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS-VLV----------EG 294
P LL + SYD V +WD + L R HHT+ +D S V + EG
Sbjct: 249 PDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQVDPAMDDSDVHISSLRSVCFSPEG 305
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 306 LYLATVADDRLLRIW 320
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/202 (23%), Positives = 99/202 (49%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 125 VLATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 182 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD---------VRNYRVPIAVLNG--HGYAVRKV 242
+++CD++ D L+ +AS D ++ +WD + + +V A+ + H ++R V
Sbjct: 241 SVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSV 299
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
FSP LA+ + D + +W
Sbjct: 300 CFSPEGL-YLATVADDRLLRIW 320
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ DV C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 112 ARHHPQVPDVSCLVLATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 171 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 228
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 229 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTNVIMW 266
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 203 (76.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 62/195 (31%), Positives = 95/195 (48%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 134 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 193
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 194 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 250
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS-VLV----------EG 294
P LL + SYD V +WD + L R HHT+ +D S V + EG
Sbjct: 251 PDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQVDPAMDDSDVHISSLRSVCFSPEG 307
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 308 LYLATVADDRLLRIW 322
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/202 (23%), Positives = 99/202 (49%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 127 VLATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 184 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 242
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD---------VRNYRVPIAVLNG--HGYAVRKV 242
+++CD++ D L+ +AS D ++ +WD + + +V A+ + H ++R V
Sbjct: 243 SVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSV 301
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
FSP LA+ + D + +W
Sbjct: 302 CFSPEGL-YLATVADDRLLRIW 322
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ DV C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 114 ARHHPQVPDVSCLVLATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 173 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 230
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 231 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTNVIMW 268
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 203 (76.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 62/195 (31%), Positives = 95/195 (48%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 134 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 193
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 194 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 250
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS-VLV----------EG 294
P LL + SYD V +WD + L R HHT+ +D S V + EG
Sbjct: 251 PDSA-LLVTASYDTNVIMWDPYTGERL--RLLHHTQLDPPMDDSDVHISSLRSVCFSPEG 307
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 308 LYLATVADDRLLRIW 322
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 35/148 (23%), Positives = 76/148 (51%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 127 ILATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 184 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 242
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD 221
+++CD++ D L+ +AS D ++ +WD
Sbjct: 243 SVVSCDFSP-DSALLVTASYDTNVIMWD 269
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/159 (27%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ D+ C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 114 ARHHPQVPDISCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 173 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 230
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 231 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTNVIMW 268
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 203 (76.5 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 44/175 (25%), Positives = 89/175 (50%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-P-----TSVRTFKEHAY 150
+P L H +E + ++P + ++ S D + LW V P ++ ++ H
Sbjct: 159 DPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHES 218
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
+ + +W+ ++ ++F SA D L IWD R + HE E+ +N +++ ++A+
Sbjct: 219 AIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLAT 278
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
AS D ++ ++D+R P+ V++ H V +V++ P+ +LAS D + +WD
Sbjct: 279 ASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
Score = 187 (70.9 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 57/231 (24%), Positives = 108/231 (46%)
Query: 10 GYSVKFSPFYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADG-VYDLAW 68
GY + +SPF E L ++ +Q+ I + + +P L + ++ + + D++W
Sbjct: 171 GYGLSWSPFKEGYL-LSGSQDQKIC----LWDVSATPQDKVLNAMFVYEGHESAIADVSW 225
Query: 69 SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWD 128
+++L +A DG + I+DT + ++ +HE REV+ +NP T+S D
Sbjct: 226 HMKNENLFGSAGEDGRLVIWDTRTNQMQHQVK-VHE--REVNYLSFNPFNEWVLATASSD 282
Query: 129 DTVKLWTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
TV L+ + + + + H V+ W+P H V S+ D L +WD+ +G +
Sbjct: 283 STVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQL 342
Query: 188 ---IPA-------------HEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
+ A H+ +I WNK + +IAS + D S+++W +
Sbjct: 343 EIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQM 393
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 45/162 (27%), Positives = 70/162 (43%)
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDV------REMGSTMIIPAHEFEILACDWNKYDDC 206
Y +W+P S S D + +WDV + + + + HE I W+ ++
Sbjct: 172 YGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNEN 231
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
L SA D + IWD R ++ V H V + F+P +LA+ S D TV L+D
Sbjct: 232 LFGSAGEDGRLVIWDTRTNQMQHQV-KVHEREVNYLSFNPFNEWVLATASSDSTVALFDL 290
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+A + H V+ E +LAS+G D + VW
Sbjct: 291 RKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 206 (77.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 71/266 (26%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D + T R L HT V Y+
Sbjct: 301 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKS---TLECKRILTGHTGSVLCLQYDER 354
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 355 ---VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 408
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 464
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 465 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 520
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 521 SG-----AYDGKIKVWDLMAALDPRA 541
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 447
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVR---NYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 504 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 561 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 587
Score = 179 (68.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 65/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D N + +H H V +N +T S D ++
Sbjct: 353 ERVIITGSSDSTVRVWDVNAGEMLNTL--IH-HCEAVLHLRFN---NGMMVTCSKDRSIA 406
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 463
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 464 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 518
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD M D A G T E + V E + S+ D+
Sbjct: 519 --IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 577 ILIWDFLNDPAA 588
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 206 (77.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 71/266 (26%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D + T R L HT V Y+
Sbjct: 301 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKS---TLECKRILTGHTGSVLCLQYDER 354
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 355 ---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 408
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 464
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 465 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 520
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 521 SG-----AYDGKIKVWDLVAALDPRA 541
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 447
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV---RNYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 504 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 561 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 587
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D T + +L H V +N +T S D ++
Sbjct: 353 ERVIITGSSDSTVRVWDVN---TGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIA 406
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 463
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 464 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 518
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD + D A G T E + V E + S+ D+
Sbjct: 519 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 577 ILIWDFLNDPAA 588
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 206 (77.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 71/266 (26%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D + T R L HT V Y+
Sbjct: 301 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKS---TLECKRILTGHTGSVLCLQYDER 354
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 355 ---VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 408
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 464
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 465 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 520
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 521 SG-----AYDGKIKVWDLMAALDPRA 541
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 447
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVR---NYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 504 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 561 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 587
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 203 (76.5 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 62/195 (31%), Positives = 95/195 (48%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 149 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 208
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 209 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 265
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS-VLV----------EG 294
P LL + SYD V +WD + L R HHT+ +D S V + EG
Sbjct: 266 PDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQVDPAMDDSDVHISSLRSVCFSPEG 322
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 323 LYLATVADDRLLRIW 337
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/202 (23%), Positives = 99/202 (49%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 142 VLATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 198
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 199 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 257
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD---------VRNYRVPIAVLNG--HGYAVRKV 242
+++CD++ D L+ +AS D ++ +WD + + +V A+ + H ++R V
Sbjct: 258 SVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSV 316
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
FSP LA+ + D + +W
Sbjct: 317 CFSPEGL-YLATVADDRLLRIW 337
Score = 145 (56.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ DV C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 129 ARHHPQVPDVSCLVLATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 187
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 188 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 245
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 246 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTNVIMW 283
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 203 (76.5 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 49/182 (26%), Positives = 82/182 (45%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VDRPT---SVRTFKEHAYCVY 153
PI + H E + D++P +T + LWT D + R F H V
Sbjct: 206 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVE 265
Query: 154 NATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII----PAHEFEILACDWNKYDDCLIA 209
+ W+P VF S S D ++RIWD+R S + AH+ ++ +W+ + L++
Sbjct: 266 DLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLLS 325
Query: 210 SASVDKSIKIWDVRNYRV--PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
D ++K+WD+R ++ P+A H V V++ P + A+ D + WD
Sbjct: 326 GGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLA 384
Query: 268 VE 269
VE
Sbjct: 385 VE 386
Score = 159 (61.0 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDT-ALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
V DL WS + D++ + AD S++I+D A P A + + H +V+ +++ R+
Sbjct: 264 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS--HREP 321
Query: 122 FITSSWDD-TVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
F+ S DD +K+W + + S V TFK+H V + W+P+ S VF ++ D + W
Sbjct: 322 FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 381
Query: 178 DV 179
D+
Sbjct: 382 DL 383
Score = 133 (51.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS----VRTFKEHAYCVYNATWNPR 160
HTR V ++PT F + S D ++++W + S + T H V W+
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS-- 317
Query: 161 HSDVFCSASGDC-TLRIWDVREM--GSTMI-IPAHEFEILACDWNKYDDCLIASASVDKS 216
H + F + GD L++WD+R+ GS + H + + +W+ D + A++ D
Sbjct: 318 HREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQ 377
Query: 217 IKIWDVRNYRVPIA 230
I WD+ R P A
Sbjct: 378 ITQWDLAVERDPEA 391
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 199 (75.1 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 61/234 (26%), Positives = 112/234 (47%)
Query: 76 LIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT 135
L ++ AD + I+ N ++L+ H+ E+ ++ + +++S D T+K+W
Sbjct: 54 LASSAADALIIIWGAY---DGNCKKTLYGHSLEISDVAWS-SDSSRLVSASDDKTLKVWD 109
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195
+ ++T K H+ V+ +NP S++ S S D +++IW+V+ + AH I
Sbjct: 110 MRSGKCLKTLKGHSDFVFCCDFNPP-SNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPI 168
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASC 255
A ++N + LI S S D +IWD + + + + V VKFSP+ + +L +
Sbjct: 169 SAVNFN-CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTA- 226
Query: 256 SYDMTVCLWDFMVEDALVGRYDHHTE-FAVGVDMSVLVEGLLASTGWDELVYVW 308
+ D T+ LWD+ L H E + + SV + S D +VY+W
Sbjct: 227 TLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW 280
Score = 187 (70.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 65/253 (25%), Positives = 117/253 (46%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
+ D+AWS S S L++A D ++K++D + +++L H+ V D+NP +
Sbjct: 84 ISDVAWS-SDSSRLVSASDDKTLKVWDMR---SGKCLKTLKGHSDFVFCCDFNPPS-NLI 138
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
++ S+D++VK+W V ++T H+ + +N S + S S D RIWD
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGS-LIVSGSYDGLCRIWDAAS- 196
Query: 183 GSTMIIPAHEFEILACDWNKY--DDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG---Y 237
G + A E + K+ + I +A++D ++K+WD R + GH Y
Sbjct: 197 GQCLRTLADEGNP-PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC-LKTYTGHKNEKY 254
Query: 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLA 297
+ FS R + S S D V +W+ ++ +V R HT+ + + ++A
Sbjct: 255 CLF-ASFSVTGRKWVVSGSEDNMVYIWNLQTKE-IVQRLQGHTDVVISAACHP-TKNIIA 311
Query: 298 STGW--DELVYVW 308
S D+ + VW
Sbjct: 312 SAALENDKTIKVW 324
Score = 177 (67.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ + S ++P + +S+ D + +W +T H+ + + W+
Sbjct: 34 TLAGHSAAISSVKFSPNG-EWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S + SAS D TL++WD+R + H + CD+N + LI S S D+S+KIW
Sbjct: 93 SSRLV-SASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSN-LIVSGSFDESVKIW 150
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+V+ + + L+ H + V F+ + +L+ S SYD +WD
Sbjct: 151 EVKTGKC-LKTLSAHSDPISAVNFNCNG-SLIVSGSYDGLCRIWD 193
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 202 (76.2 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 62/195 (31%), Positives = 95/195 (48%)
Query: 128 DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM- 186
D +K+W V + H V + ++ P S + SAS D TLRIWD+ + G +
Sbjct: 134 DGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQ 193
Query: 187 IIPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
++ H + C + DC ++ SA+ +KS+ +W +R+Y + I L GH +V FS
Sbjct: 194 VLSGHLQWVYCCSISP--DCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFS 250
Query: 246 PHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMS-VLV----------EG 294
P LL + SYD V +WD + L R HHT+ +D S V + EG
Sbjct: 251 PDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQLNPPMDDSDVHISSLRSVCFSPEG 307
Query: 295 L-LASTGWDELVYVW 308
L LA+ D L+ +W
Sbjct: 308 LYLATVADDRLLRIW 322
Score = 158 (60.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 47/202 (23%), Positives = 98/202 (48%)
Query: 75 LLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW 134
+L + DG +KI++ T + +L H V + P+ +++S D T+++W
Sbjct: 127 ILATGLNDGQIKIWEVQ---TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Query: 135 TVDRP-TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
+++ ++ H VY + +P S + CSA+G+ ++ +W +R + H+
Sbjct: 184 DLNKHGKQIQVLSGHLQWVYCCSISPDCS-MLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 242
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWD------VRNYR-----VPIAVLNGHGYAVRKV 242
+++CD++ D L+ +AS D ++ +WD +R+ P+ + H ++R V
Sbjct: 243 SVVSCDFSP-DSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSV 301
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
FSP LA+ + D + +W
Sbjct: 302 CFSPEGL-YLATVADDRLLRIW 322
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 155 ATWNPRHSDVFCS--ASG--DCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIA 209
A +P+ DV C A+G D ++IW+V + G ++ + H+ + + ++
Sbjct: 114 ARHHPQVPDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 210 SASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
SAS DK+++IWD+ + I VL+GH V SP ++L S + + +V LW M
Sbjct: 173 SASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC-SMLCSAAGEKSVFLWS-MRS 230
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
L+ + + H V D S LL + +D V +W
Sbjct: 231 YTLIRKLEGHQSSVVSCDFSP-DSALLVTASYDTNVIMW 268
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 205 (77.2 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT V V E LLAS D + W
Sbjct: 183 SEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 199 (75.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 63/227 (27%), Positives = 103/227 (45%)
Query: 51 LTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVH 110
L E+VA A V L ++ LL D V ++ P N I SL HT V
Sbjct: 13 LQEIVAH--ASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP---NCIMSLTGHTSPVE 67
Query: 111 SADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG 170
S N T + + S ++++W ++ +RT H + + ++P + + S S
Sbjct: 68 SVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP-YGEFVASGSQ 125
Query: 171 DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIA 230
D +++WD+R G H + + C D +ASA+ D ++K+WD+ ++ ++
Sbjct: 126 DTNIKLWDIRRKGCVFRYRGHS-QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MS 183
Query: 231 VLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVG 274
GH V V+F P+ LLAS S D T+ WD F V + G
Sbjct: 184 EFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEG 229
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/170 (27%), Positives = 87/170 (51%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
H + +++ ++ L+AS S D++I+ WD+ ++V ++ + G VR
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVR 235
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 204 (76.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 69/251 (27%), Positives = 106/251 (42%)
Query: 42 LDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRS 101
+D + PA +V V+ AW+ D LL + D + +I++ + T +
Sbjct: 147 VDRAVEIPASKAMVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSESSTGGSTQL 205
Query: 102 LHEH-----------TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAY 150
+ H ++V S D+N + T S+D ++WT D + T +H
Sbjct: 206 VLRHCIREGGQDVPSNKDVTSLDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKG 263
Query: 151 CVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
++ WN + + + SA D T IWD + P H L DW + AS
Sbjct: 264 PIFALKWNKKGNFIL-SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FAS 320
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED 270
S D I + + R PI GH V +K+ P NLLASCS DMT+ LW M +D
Sbjct: 321 CSTDMCIHVCKLGQER-PIKTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKLWS-MKQD 377
Query: 271 ALVGRYDHHTE 281
V H++
Sbjct: 378 TCVHDLQAHSK 388
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 64/257 (24%), Positives = 110/257 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 224 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 276
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 277 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 334
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++K+W ++ + L H +
Sbjct: 335 ERPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKLWSMKQDTC-VHDLQAHSKEIYT 392
Query: 242 VKFSPH-------RRNLLA--SCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLV 292
+K+SP NL+ S S+D TV LWD A + H E V S
Sbjct: 393 IKWSPTGPGTNNPNANLMLARSASFDSTVRLWD-AERGACIHTLTKHQEPVYSVAFSP-- 449
Query: 293 EGL-LASTGWDELVYVW 308
+G LAS +D+ V++W
Sbjct: 450 DGRHLASGSFDKCVHIW 466
Score = 159 (61.0 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 48/178 (26%), Positives = 90/178 (50%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVKLWTVDRPTSVRTFKEHAYCVYNAT 156
PI++ HT EV++ ++PT + + S DD T+KLW++ + T V + H+ +Y
Sbjct: 337 PIKTFQGHTNEVNAIKWDPT--GNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIK 394
Query: 157 WNPR-------HSDVFC--SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
W+P ++++ SAS D T+R+WD + H+ + + ++ D
Sbjct: 395 WSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSP-DGRH 453
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+AS S DK + IW+ ++ + + G G + +V ++ + AS S D +VC+ D
Sbjct: 454 LASGSFDKCVHIWNTQSGAL-VNSYRGTG-GIFEVCWNSTGDKVGASAS-DGSVCVLD 508
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 50/197 (25%), Positives = 89/197 (45%)
Query: 39 VHVLDLSPAAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
+HV L P T F + V + W + +LL + D ++K++ T
Sbjct: 327 IHVCKLGQERPIKT----FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKLWSMK-QDTC- 379
Query: 98 PIRSLHEHTREVHSADYNPT-------RRDSFI--TSSWDDTVKLWTVDRPTSVRTFKEH 148
+ L H++E+++ ++PT + + ++S+D TV+LW +R + T +H
Sbjct: 380 -VHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKH 438
Query: 149 AYCVYNATWNP--RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDC 206
VY+ ++P RH S S D + IW+ + G+ + I WN D
Sbjct: 439 QEPVYSVAFSPDGRH---LASGSFDKCVHIWNTQS-GALVNSYRGTGGIFEVCWNSTGDK 494
Query: 207 LIASASVDKSIKIWDVR 223
+ ASAS D S+ + D+R
Sbjct: 495 VGASAS-DGSVCVLDLR 510
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 40 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 97
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 156
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 157 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 215 PPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 192 (72.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 65/258 (25%), Positives = 124/258 (48%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 89 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 202
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTGHK 256
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 257 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHP-TE 313
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 314 NIIASAALENDKTIKLWK 331
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 40 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 97
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 156
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 157 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 215 PPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 192 (72.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 65/258 (25%), Positives = 124/258 (48%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 89 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 202
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTGHK 256
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 257 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHP-TE 313
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 314 NIIASAALENDKTIKLWK 331
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 40 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 97
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 156
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 157 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 215 PPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 192 (72.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 65/258 (25%), Positives = 124/258 (48%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 89 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 202
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTGHK 256
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 257 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHP-TE 313
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 314 NIIASAALENDKTIKLWK 331
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 40 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 97
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 156
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 157 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 215 PPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 192 (72.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 65/258 (25%), Positives = 124/258 (48%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 89 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 202
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTGHK 256
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 257 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHP-TE 313
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 314 NIIASAALENDKTIKLWK 331
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 40 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 97
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 156
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 157 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 215 PPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 192 (72.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 65/258 (25%), Positives = 124/258 (48%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 89 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 202
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + GH
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTGHK 256
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 257 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHP-TE 313
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 314 NIIASAALENDKTIKLWK 331
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L HT+ V S ++P + +SS D +K+W +T H + + W+
Sbjct: 40 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS- 97
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S++ SAS D TL+IWDV + H + C++N + LI S S D+S++IW
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 156
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
DV+ + + L H V V F+ +L+ S SYD +WD L D
Sbjct: 157 DVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 281 EFAVGVDMSVLVEGLLASTGWDELVYVW 308
V S + +LA+T D + +W
Sbjct: 215 PPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 182 (69.1 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 64/258 (24%), Positives = 123/258 (47%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
G+ D+AWS S +LL++A D ++KI+D + + +++L H+ V ++NP + +
Sbjct: 89 GISDVAWS-SDSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNP-QSNL 143
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D++V++W V ++T H+ V +N R + S+S D RIWD
Sbjct: 144 IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS 202
Query: 181 -EMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ T+I P F + + KY I +A++D ++K+WD + + H
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN-GKY----ILAATLDNTLKLWDYSKGKC-LKTYTCHK 256
Query: 237 ---YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + FS + S S D V +W+ ++ +V + HT+ + E
Sbjct: 257 NEKYCIF-ANFSVTGGKWIVSGSEDNLVYIWNLQTKE-VVQKLQGHTDVVISTACHP-TE 313
Query: 294 GLLASTGW--DELVYVWQ 309
++AS D+ + +W+
Sbjct: 314 NIIASAALENDKTIKLWK 331
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 203 (76.5 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 76/276 (27%), Positives = 125/276 (45%)
Query: 41 VLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIR 100
+ +L+P A A + D GV + A S SL+ ++ D +V+++ ++ + +
Sbjct: 44 IWNLAPKARAFRFVGHTDVITGV-NFAPS---GSLVASSSRDQTVRLWTPSIKGESTVFK 99
Query: 101 SLHEHTREVHSADYNPTRRDS--FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWN 158
+ HT V S ++ RD +T+S D +VK+W V+R + + H V A ++
Sbjct: 100 A---HTASVRSVHFS---RDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFS 153
Query: 159 PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218
P + S D T+R+WD I + D+N C IAS+ D +IK
Sbjct: 154 P-DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTC-IASSGADNTIK 211
Query: 219 IWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278
IWD+R ++ I H V F P N L S S D T+ + D ++E L+ Y
Sbjct: 212 IWDIRTNKL-IQHYKVHNAGVNCFSFHPSG-NYLISGSSDSTIKILD-LLEGRLI--YTL 266
Query: 279 HTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQGMD 313
H + ++ +G L AS G D V +W+ D
Sbjct: 267 HGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFD 302
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEI 195
++ PT R FK H + A +NP + + + S D +L IW++ H I
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQL-ATGSCDKSLMIWNLAPKARAFRFVGHTDVI 63
Query: 196 LACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASC 255
++ L+AS+S D+++++W + + V H +VR V FS + L+ +
Sbjct: 64 TGVNFAP-SGSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDGQRLVTA- 120
Query: 256 SYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
S D +V +W + L + HT + S +G L+AS G D V +W
Sbjct: 121 SDDKSVKVWGVERKKFLYS-LNRHTNWVRCARFSP--DGRLIASCGDDRTVRLW 171
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 53/195 (27%), Positives = 98/195 (50%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + +++ ++ L+AS S D++I+ WD+ ++V ++ + G VR V F+P
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 251 LLASCSYDMTVCLWD 265
L + C + V W+
Sbjct: 246 LYSGCQDSLRVYGWE 260
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT V V E LLAS D + W
Sbjct: 183 SEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 53/195 (27%), Positives = 98/195 (50%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + +++ ++ L+AS S D++I+ WD+ ++V ++ + G VR V F+P
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 251 LLASCSYDMTVCLWD 265
L + C + V W+
Sbjct: 246 LYSGCQDSLRVYGWE 260
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT V V E LLAS D + W
Sbjct: 183 SEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 53/195 (27%), Positives = 98/195 (50%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + +++ ++ L+AS S D++I+ WD+ ++V ++ + G VR V F+P
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 251 LLASCSYDMTVCLWD 265
L + C + V W+
Sbjct: 246 LYSGCQDSLRVYGWE 260
Score = 205 (77.2 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT V V E LLAS D + W
Sbjct: 183 SEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 207 (77.9 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 56/207 (27%), Positives = 104/207 (50%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
H+ V+ ++P + ++ S D T +LW+++ +++ +K H + V++ +++P
Sbjct: 678 HSGPVYGCSFSPDSQ-YLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSP-FGFY 735
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL--IASASVDKSIKIWDV 222
F +AS D T R+W + I H + C+ ++ + +A+ S DKS ++W++
Sbjct: 736 FATASHDRTARLWTTNHISPLRIFTGH---LSDCNTVRFHPNINYLATGSNDKSARLWEI 792
Query: 223 RNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF 282
+ + + + GH + V FSP R LLA+ D +V LWD V + D HT+
Sbjct: 793 QTGKC-VRIFMGHRAPIYTVAFSPDGR-LLATAGEDTSVILWDLSTGKK-VKKMDGHTKC 849
Query: 283 AVGVDMSVLVEG-LLASTGWDELVYVW 308
+D S +G +LAS D V +W
Sbjct: 850 VYSLDFSC--DGSILASGSSDCTVRLW 874
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 117 TRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
T ++ + S + KL + + +TF H+ VY +++P S S S D T R+
Sbjct: 647 TANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSP-DSQYLLSCSEDTTARL 705
Query: 177 WDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
W + M + + H F + ++ + A+AS D++ ++W N+ P+ + GH
Sbjct: 706 WSMETMSNLVCYKGHNFPVWDVSFSPFG-FYFATASHDRTARLWTT-NHISPLRIFTGHL 763
Query: 237 YAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-L 295
V+F P+ N LA+ S D + LW+ V + H V S +G L
Sbjct: 764 SDCNTVRFHPNI-NYLATGSNDKSARLWEIQTGKC-VRIFMGHRAPIYTVAFSP--DGRL 819
Query: 296 LASTGWDELVYVW 308
LA+ G D V +W
Sbjct: 820 LATAGEDTSVILW 832
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
F T+S D T +LWT + + +R F H ++P + + + S D + R+W+++
Sbjct: 736 FATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP-NINYLATGSNDKSARLWEIQT 794
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
I H I ++ D L+A+A D S+ +WD+ + + ++GH V
Sbjct: 795 GKCVRIFMGHRAPIYTVAFSP-DGRLLATAGEDTSVILWDLSTGK-KVKKMDGHTKCVYS 852
Query: 242 VKFSPHRRNLLASCSYDMTVCLWD 265
+ FS ++LAS S D TV LWD
Sbjct: 853 LDFSCDG-SILASGSSDCTVRLWD 875
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 97 NPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNAT 156
+P+R H + ++ ++P + T S D + +LW + VR F H +Y
Sbjct: 754 SPLRIFTGHLSDCNTVRFHPNI-NYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVA 812
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKS 216
++P + +A D ++ +WD+ + H + + D++ D ++AS S D +
Sbjct: 813 FSP-DGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS-CDGSILASGSSDCT 870
Query: 217 IKIWDVR 223
+++WDV+
Sbjct: 871 VRLWDVK 877
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 53/195 (27%), Positives = 98/195 (50%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + +++ ++ L+AS S D++I+ WD+ ++V ++ + G VR V F+P
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 251 LLASCSYDMTVCLWD 265
L + C + V W+
Sbjct: 246 LYSGCQDSLRVYGWE 260
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT V V E LLAS D + W
Sbjct: 183 SEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 205 (77.2 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 63/215 (29%), Positives = 98/215 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H V S T D V LW++++P + + H V +
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 155 ATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASV 213
N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S
Sbjct: 69 VRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQ 125
Query: 214 DKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALV 273
D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++
Sbjct: 126 DTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMM 182
Query: 274 GRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ HT V V E LLAS D + W
Sbjct: 183 SEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 204 (76.9 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 52/195 (26%), Positives = 98/195 (50%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDT-V 131
+ L++A GS++++D A +R+L H + S D++P F+ S DT +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLMGHKANICSLDFHPY--GEFVASGSQDTNI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW + R V ++ H+ V ++P SA+ D T+++WD+ G M P
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + +++ ++ L+AS S D++I+ WD+ ++V ++ + G VR + F+P
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSILFNPDGCC 245
Query: 251 LLASCSYDMTVCLWD 265
L + C + V W+
Sbjct: 246 LYSGCQDSLRVYGWE 260
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 203 (76.5 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 71/266 (26%), Positives = 119/266 (44%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D T R L HT V Y+
Sbjct: 260 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKN---TLECKRILTGHTGSVLCLQYDER 313
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 314 ---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 367
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 368 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 423
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 424 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 479
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 480 SG-----AYDGKIKVWDLVAALDPRA 500
Score = 192 (72.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 351 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 406
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 407 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 462
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV---RNYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 463 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 519
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 520 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 546
Score = 178 (67.7 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D T + +L H V +N +T S D ++
Sbjct: 312 ERVIITGSSDSTVRVWDVN---TGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIA 365
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 366 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 422
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 423 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 477
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD + D A G T E + V E + S+ D+
Sbjct: 478 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 535
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 536 ILIWDFLNDPAA 547
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 203 (76.5 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 71/266 (26%), Positives = 119/266 (44%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D T R L HT V Y+
Sbjct: 301 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKN---TLECKRILTGHTGSVLCLQYDER 354
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 355 ---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 408
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 464
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 465 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 520
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 521 SG-----AYDGKIKVWDLVAALDPRA 541
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 447
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV---RNYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 504 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 561 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 587
Score = 178 (67.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D T + +L H V +N +T S D ++
Sbjct: 353 ERVIITGSSDSTVRVWDVN---TGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIA 406
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 463
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 464 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 518
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD + D A G T E + V E + S+ D+
Sbjct: 519 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 577 ILIWDFLNDPAA 588
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 203 (76.5 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 71/266 (26%), Positives = 119/266 (44%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+T+ GVY L + D +++ + D ++KI+D T R L HT V Y+
Sbjct: 301 ETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKN---TLECKRILTGHTGSVLCLQYDER 354
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
IT S D TV++W V+ + T H V + +N + + + S D ++ +W
Sbjct: 355 ---VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVW 408
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W+ + LNG
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEF-VRTLNG 464
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 465 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 520
Query: 293 EGLLASTGWDELVYVWQ--QGMDPRA 316
G +D + VW +DPRA
Sbjct: 521 SG-----AYDGKIKVWDLVAALDPRA 541
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 58/210 (27%), Positives = 102/210 (48%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDT 130
++ +++ D S+ ++D A P R L H V+ D++ D +I S S D T
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRT 447
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDV---RNYRVP-----IAVLNGHGYAVRK 241
HE E++ C ++D+ I S + D IK+WD+ + R P + L H V +
Sbjct: 504 GHE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
++F + + S S+D T+ +WDF+ + A
Sbjct: 561 LQFDEFQ---IVSSSHDDTILIWDFLNDPA 587
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 64/252 (25%), Positives = 111/252 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
+ ++I +D +V+++D N + +H H V +N +T S D ++
Sbjct: 353 ERVIITGSSDSTVRVWDVNAGEMLNTL--IH-HCEAVLHLRFN---NGMMVTCSKDRSIA 406
Query: 133 LWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+W + PT + R H V ++ ++ SASGD T+++W+ +
Sbjct: 407 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKY---IVSASGDRTIKVWNTSTCEFVRTLN 463
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ I AC +Y D L+ S S D +I++WD+ + VL GH VR ++F R
Sbjct: 464 GHKRGI-AC--LQYRDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKR- 518
Query: 250 NLLASCSYDMTVCLWDFMVE-D--ALVGRYDHHT--EFAVGVDMSVLVEGLLASTGWDEL 304
+ S +YD + +WD + D A G T E + V E + S+ D+
Sbjct: 519 --IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDT 576
Query: 305 VYVWQQGMDPRA 316
+ +W DP A
Sbjct: 577 ILIWDFLNDPAA 588
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 200 (75.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 58/177 (32%), Positives = 84/177 (47%)
Query: 133 LWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE 192
LW + H V + ++P H ++ SAS D T+R+W + G AH
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
+ + D++ D +A+AS DKSIK+W + R + L H + VR KFSP R L+
Sbjct: 61 APVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LI 117
Query: 253 ASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
SCS D T+ +WD V + FA VD + G +AS G D+ V VW
Sbjct: 118 VSCSEDKTIKIWD-TTNKQCVNNFSDSVGFANFVDFNP--SGTCIASAGSDQTVKVW 171
Score = 198 (74.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 68/243 (27%), Positives = 110/243 (45%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWDDT 130
H +LL +A D +V+++ +P HT V S D++ + F+ T+S D +
Sbjct: 29 HGNLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQ--FLATASEDKS 83
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
+K+W++ R + + H + V A ++P + S S D T++IWD
Sbjct: 84 IKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 142
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
D+N C IASA D+++K+WDVR ++ + H V + F P N
Sbjct: 143 SVGFANFVDFNPSGTC-IASAGSDQTVKVWDVRVNKL-LQHYQVHSGGVNCISFHPSG-N 199
Query: 251 LLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 310
L + S D T+ + D ++E L+ HT V S E L AS G D V +W+
Sbjct: 200 YLITASSDGTLKILD-LLEGRLIYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRT 257
Query: 311 GMD 313
D
Sbjct: 258 NFD 260
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/176 (27%), Positives = 79/176 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
H V S ++P + ++S D TV+LW D+ FK H V + ++
Sbjct: 17 HKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQF 74
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
+AS D ++++W + + H + ++ D LI S S DK+IKIWD N
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTN 133
Query: 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
+ + G+A V F+P +AS D TV +WD V + L+ Y H+
Sbjct: 134 KQCVNNFSDSVGFA-NFVDFNPSG-TCIASAGSDQTVKVWDVRV-NKLLQHYQVHS 186
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 197 (74.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 65/232 (28%), Positives = 111/232 (47%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT---VDRPTSVRTFKE-HAYCVYN 154
+++L H V SA ++P + F + D T+++W DR + + H +
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGK-LFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRE 65
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212
W+ SAS D T+ +WD + E + H+ E+ + W++ + L+A+ S
Sbjct: 66 LAWSCC-GHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGN-LLATCS 123
Query: 213 VDKSIKIWDVRN-------YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
DKS+ IW++ + Y +AVLNGH V+KV + P + +LLAS SYD T+ ++
Sbjct: 124 RDKSVWIWEIHHAPDQEDEYEC-VAVLNGHTQDVKKVCWHP-QEDLLASASYDNTIRMYR 181
Query: 266 FMVEDA---LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ-GMD 313
+ D+ ++ + H+ + + L AS D V VWQQ G D
Sbjct: 182 QDLADSEWEMLEPLESHSSTVWSISFDATGQRL-ASCSEDTTVKVWQQYGPD 232
Score = 125 (49.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 53/231 (22%), Positives = 101/231 (43%)
Query: 60 ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPP--TANPIRSLHEHTREVHSADYNPT 117
A V+ AW L + D ++++++ + A + + HTR + ++
Sbjct: 14 AGRVWSAAWHPG-GKLFASCGEDKTIRVWNKSDTDRWVAQTVLT-DGHTRTIRELAWSCC 71
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSV----RTFKEHAYCVYNATWNPRHSDVFCSASGDCT 173
++S+D TV +W D+ + T + H V + TW+ R ++ + S D +
Sbjct: 72 GH-YLASASFDTTVAVW--DKKSGEFECNATLEGHDNEVKSVTWS-RSGNLLATCSRDKS 127
Query: 174 LRIWDVR-------EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW--DVRN 224
+ IW++ E ++ H ++ W+ +D L+ASAS D +I+++ D+ +
Sbjct: 128 VWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQED-LLASASYDNTIRMYRQDLAD 186
Query: 225 YRVP-IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
+ L H V + F + L ASCS D TV +W D +G
Sbjct: 187 SEWEMLEPLESHSSTVWSISFDATGQRL-ASCSEDTTVKVWQQYGPDNALG 236
Score = 93 (37.8 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 31/135 (22%), Positives = 64/135 (47%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP----IRSLHEHTREVHSADYNPTR 118
V + WS S +LL D SV I++ P + L+ HT++V ++P +
Sbjct: 107 VKSVTWSRS-GNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHP-Q 164
Query: 119 RDSFITSSWDDTVKLWTVDRPTS----VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTL 174
D ++S+D+T++++ D S + + H+ V++ +++ + S S D T+
Sbjct: 165 EDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRL-ASCSEDTTV 223
Query: 175 RIWDVREMGSTMIIP 189
++W + + IP
Sbjct: 224 KVWQQYGPDNALGIP 238
Score = 61 (26.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 23/88 (26%), Positives = 38/88 (43%)
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIW-----DVRN---YRVPIAVLNGHGYAVRKV 242
H + DW K L+A+A D +++I+ RN + + + V H KV
Sbjct: 256 HSRSVYDIDWCKQTG-LLATACGDDTVRIFREASDSDRNEPTFELVVTV-EAHSQDANKV 313
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFMVED 270
+ P LL + S D + LW ++ D
Sbjct: 314 AWHPTVPGLLLTASDDGEIKLWQYVDAD 341
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 272 LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
LV + H++ A V V GLL + D + +WQ
Sbjct: 299 LVVTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLWQ 336
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 72/265 (27%), Positives = 111/265 (41%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH-----------TREVHS 111
V+ AW+ D LL + D + +I++ + T+ + + H ++V S
Sbjct: 172 VFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTS 230
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
D+N + T S+D ++WT D + T +H ++ WN + + + SA D
Sbjct: 231 LDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNFIL-SAGVD 287
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
T IWD + P H L DW + AS S D I + + R PI
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHVCKLGQDR-PIKT 344
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL 291
GH V +K+ P NLLASCS DMT+ +W M +D V H + + S
Sbjct: 345 FQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWS-MKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 292 VEG--------LLASTGWDELVYVW 308
G +LAS +D V +W
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLW 427
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ L W++ + +L A V D + I+D T + H+ D+ ++F
Sbjct: 269 IFALKWNKKGNFILSAGV-DKTTIIWDAH---TGEAKQQFPFHSAPALDVDWQSN--NTF 322
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D + + + + ++TF+ H V W+P ++ S S D TL+IW +++
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD 381
Query: 183 GSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+ AH EI W N + ++ASAS D ++++WDV + + I L
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTK 440
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
H V V FSP R LAS S+D V +W+ ALV Y
Sbjct: 441 HQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/256 (25%), Positives = 111/256 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 228 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 280
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 338
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++KIW ++ + L H +
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC-VHDLQAHNKEIYT 396
Query: 242 VKFSPH-------RRNL-LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
+K+SP NL LAS S+D TV LWD + + H E V S +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVYSVAFSP--D 453
Query: 294 G-LLASTGWDELVYVW 308
G LAS +D+ V++W
Sbjct: 454 GRYLASGSFDKCVHIW 469
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 39 VHVLDLSPAAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
+HV L P T F + V + W + +LL + D ++KI+ N
Sbjct: 331 IHVCKLGQDRPIKT----FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD---N 382
Query: 98 PIRSLHEHTREVHSADYNPTRRDS--------FITSSWDDTVKLWTVDRPTSVRTFKEHA 149
+ L H +E+++ ++PT + ++S+D TV+LW VDR + T +H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA 209
VY+ ++P S S D + IW+ + G+ + I WN D + A
Sbjct: 443 EPVYSVAFSP-DGRYLASGSFDKCVHIWNT-QTGALVHSYRGTGGIFEVCWNAAGDKVGA 500
Query: 210 SASVDKSIKIWDVR 223
SAS D S+ + D+R
Sbjct: 501 SAS-DGSVCVLDLR 513
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 72/265 (27%), Positives = 111/265 (41%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH-----------TREVHS 111
V+ AW+ D LL + D + +I++ + T+ + + H ++V S
Sbjct: 172 VFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTS 230
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
D+N + T S+D ++WT D + T +H ++ WN + + + SA D
Sbjct: 231 LDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNFIL-SAGVD 287
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
T IWD + P H L DW + AS S D I + + R PI
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHVCKLGQDR-PIKT 344
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL 291
GH V +K+ P NLLASCS DMT+ +W M +D V H + + S
Sbjct: 345 FQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWS-MKQDNCVHDLQAHNKEIYTIKWSPT 402
Query: 292 VEG--------LLASTGWDELVYVW 308
G +LAS +D V +W
Sbjct: 403 GPGTNNPNANLMLASASFDSTVRLW 427
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/222 (27%), Positives = 102/222 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ L W++ + +L A V D + I+D T + H+ D+ ++F
Sbjct: 269 IFALKWNKKGNFILSAGV-DKTTIIWDAH---TGEAKQQFPFHSAPALDVDWQSN--NTF 322
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D + + + + ++TF+ H V W+P ++ S S D TL+IW +++
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD 381
Query: 183 GSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+ AH EI W N + ++ASAS D ++++WDV + + I L
Sbjct: 382 NCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTK 440
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
H V V FSP R LAS S+D V +W+ ALV Y
Sbjct: 441 HQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/256 (25%), Positives = 111/256 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 228 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 280
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 338
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++KIW ++ + L H +
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDNC-VHDLQAHNKEIYT 396
Query: 242 VKFSPH-------RRNL-LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
+K+SP NL LAS S+D TV LWD + + H E V S +
Sbjct: 397 IKWSPTGPGTNNPNANLMLASASFDSTVRLWD-VDRGICIHTLTKHQEPVYSVAFSP--D 453
Query: 294 G-LLASTGWDELVYVW 308
G LAS +D+ V++W
Sbjct: 454 GRYLASGSFDKCVHIW 469
Score = 134 (52.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 39 VHVLDLSPAAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
+HV L P T F + V + W + +LL + D ++KI+ N
Sbjct: 331 IHVCKLGQDRPIKT----FQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD---N 382
Query: 98 PIRSLHEHTREVHSADYNPTRRDS--------FITSSWDDTVKLWTVDRPTSVRTFKEHA 149
+ L H +E+++ ++PT + ++S+D TV+LW VDR + T +H
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 150 YCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIA 209
VY+ ++P S S D + IW+ + G+ + I WN D + A
Sbjct: 443 EPVYSVAFSP-DGRYLASGSFDKCVHIWNT-QTGALVHSYRGTGGIFEVCWNAAGDKVGA 500
Query: 210 SASVDKSIKIWDVR 223
SAS D S+ + D+R
Sbjct: 501 SAS-DGSVCVLDLR 513
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 201 (75.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 64/243 (26%), Positives = 114/243 (46%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
+ D L + ADGSVK++ + P+ + HT V ++P+ R F+ T+ +D
Sbjct: 289 DQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGR--FLGTTCYD 343
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTM 186
+ +LW ++ + + H+ VY+ + H D + +G D R+WD+R M
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMGVYDIAF---HQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H EI +++ + IA+ S D + K+WD+R R + + H V VKF P
Sbjct: 401 FLEGHLKEIYGINFSP-NGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEP 458
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELV 305
+ L + +YD T +W L H + +G+D+S +G L+A+ +D
Sbjct: 459 IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGLDISS--DGQLIATCSYDRTF 515
Query: 306 YVW 308
+W
Sbjct: 516 KLW 518
Score = 162 (62.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GVYD+A+ + SL D +++D T I L H +E++ +++P
Sbjct: 366 GVYDIAFHQD-GSLAGTGGLDAFGRVWDLR---TGRCIMFLEGHLKEIYGINFSPNGYH- 420
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D+T K+W + + V T H V + P H D + + D T +IW
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG 480
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ HE +++ D + D LIA+ S D++ K+W
Sbjct: 481 WSPLKTLAGHEGKVMGLDISS-DGQLIATCSYDRTFKLW 518
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 58/252 (23%), Positives = 103/252 (40%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT------RRDSFITS 125
+ +L A G K++ P + + +L H V + ++P ++D + S
Sbjct: 241 NSKMLATACWSGLCKLWSV---PDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 297
Query: 126 -SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG 183
+ D +VKLW++D V + H V W+P S F + D + R+WD+
Sbjct: 298 CAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQE 355
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ H + +++ D L + +D ++WD+R R I L GH + +
Sbjct: 356 EILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGIN 413
Query: 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303
FSP+ ++ A+ S D T +WD + V H GV + L + +D
Sbjct: 414 FSPNGYHI-ATGSGDNTCKVWDLR-QRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDN 471
Query: 304 LVYVWQQ-GMDP 314
+W G P
Sbjct: 472 TAKIWTHPGWSP 483
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 51/192 (26%), Positives = 91/192 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S I D + K++DTA + + +L H V++ +N D T S+D T KL
Sbjct: 105 SCFITGSYDRTCKLWDTA---SGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W+V+ TF+ H + ++NP+ S + + S D T ++WD++ + H
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQSGEEVFTLTGHSA 220
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
EI++ +N + +I + S D ++ +W+ R + L GH + F+ +L+
Sbjct: 221 EIISLSFNTSGNRII-TGSFDHTVTVWEADTGR-KVYTLIGHCAEISSAVFN-WDCSLIL 277
Query: 254 SCSYDMTVCLWD 265
+ S D T LWD
Sbjct: 278 TGSMDKTCKLWD 289
Score = 187 (70.9 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
FIT S+D T KLW + T + H VY +N + D + S D T ++W V E
Sbjct: 107 FITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-E 165
Query: 182 MGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
G H EI+ +N L+A+ S+D + K+WD+++ + L GH +
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNP-QSTLVATGSMDTTAKLWDIQSGE-EVFTLTGHSAEII 223
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGV---DMSVLVEGLLA 297
+ F+ ++ S+D TV +W+ + H E + V D S+++ G +
Sbjct: 224 SLSFNTSGNRIITG-SFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMD 282
Query: 298 STG--WD 302
T WD
Sbjct: 283 KTCKLWD 289
Score = 172 (65.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 56/246 (22%), Positives = 104/246 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
VY +A++ + + D + K++ T + HT E+ +NP +
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVE---TGKCYHTFRGHTAEIVCLSFNP-QSTLV 192
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
T S D T KLW + V T H+ + + ++N + + + S D T+ +W+
Sbjct: 193 ATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRII-TGSFDHTVTVWEADTG 251
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
+ H EI + +N +D LI + S+DK+ K+WD N + +A L GH +
Sbjct: 252 RKVYTLIGHCAEISSAVFN-WDCSLILTGSMDKTCKLWDAVNGKC-VATLTGHDDEILDS 309
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWD 302
F + L+A+ S D T ++ + + H E + + + LL + D
Sbjct: 310 CFD-YTGKLIATASADGTARIFSAATRECVTKLEGHEGEISK-ISFNPQGNRLLTGSS-D 366
Query: 303 ELVYVW 308
+ +W
Sbjct: 367 KTARIW 372
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 48/202 (23%), Positives = 92/202 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
+ L+++ S + ++ + D +V +++ T + +L H E+ SA +N
Sbjct: 222 IISLSFNTSGNRIITGSF-DHTVTVWEA---DTGRKVYTLIGHCAEISSAVFN-WDCSLI 276
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+T S D T KLW V T H + ++ ++ + +AS D T RI+
Sbjct: 277 LTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYT-GKLIATASADGTARIFSAATR 335
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
+ HE EI +N + L+ +S DK+ +IWD + + + VL GH +
Sbjct: 336 ECVTKLEGHEGEISKISFNPQGNRLLTGSS-DKTARIWDAQTGQC-LQVLEGHTDEIFSC 393
Query: 243 KFSPHRRNLLASCSYDMTVCLW 264
F+ ++ +++ + S D T +W
Sbjct: 394 AFN-YKGDIIITGSKDNTCRIW 414
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 195 (73.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/205 (30%), Positives = 97/205 (47%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
HT V S ++ + S +T+S D T+K+WTV R + + +H V A ++P +
Sbjct: 103 HTATVRSVHFSSDGQ-SLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP-DGRL 160
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
SAS D T+++WD H +++ C IA+A DK++K+WDVR
Sbjct: 161 IASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTC-IAAAGTDKTVKVWDVRM 219
Query: 225 YRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAV 284
R+ + H AV + F P N L + S D T+ + D ++E L+ H A
Sbjct: 220 NRL-LQHYQVHTAAVNSLSFHPSG-NYLITASNDSTLKILD-LLEGRLLYTLHGHQGPAT 276
Query: 285 GVDMSVLVEGLLASTGWDELVYVWQ 309
V S + AS G DE V VW+
Sbjct: 277 CVAFSRTGD-FFASGGSDEQVMVWK 300
Score = 177 (67.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 58/215 (26%), Positives = 96/215 (44%)
Query: 100 RSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNP 159
R H + S D++ ++ + S D +K+W++ H V ++P
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP 72
Query: 160 RHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ S S D T+ +W G + + AH + + ++ L+ +AS DK+IK+
Sbjct: 73 S-GHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLV-TASDDKTIKV 130
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHH 279
W V + + L+ H VR +FSP R L+AS S D TV LWD + + + H
Sbjct: 131 WTVHRQKFLFS-LSQHINWVRCARFSPDGR-LIASASDDKTVKLWDKTSREC-IHSFCEH 187
Query: 280 TEFAVGVDMSVLVEGL-LASTGWDELVYVWQQGMD 313
FA V+ G +A+ G D+ V VW M+
Sbjct: 188 GGFANHVEFHP--SGTCIAAAGTDKTVKVWDVRMN 220
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 41/173 (23%), Positives = 76/173 (43%)
Query: 139 PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILAC 198
P+ R F+ H + + ++ + S S D L+IW ++ + H+ ++
Sbjct: 10 PSLERHFRGHRDAITSVDFSLNKKQL-ASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV 68
Query: 199 DWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYD 258
++ L+AS S DK++ +W V + + V H VR V FS ++L+ + S D
Sbjct: 69 QFSPSGH-LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTA-SDD 125
Query: 259 MTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQQ 310
T+ +W + L H + S +G L+AS D+ V +W +
Sbjct: 126 KTIKVWTVHRQKFLFS-LSQHINWVRCARFSP--DGRLIASASDDKTVKLWDK 175
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 64/243 (26%), Positives = 113/243 (46%)
Query: 70 ESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI-TSSWD 128
+ D L + ADGSVK++ + P+ + HT V ++P+ R F+ T+ +D
Sbjct: 289 DQKDVNLASCAADGSVKLWSL---DSDEPVADIEGHTVRVARVMWHPSGR--FLGTTCYD 343
Query: 129 DTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG--DCTLRIWDVREMGSTM 186
+ +LW ++ + + H+ VY+ + H D + +G D R+WD+R M
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMGVYDIAF---HQDGSLAGTGGLDAFGRVWDLRTGRCIM 400
Query: 187 IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ H EI ++ + IA+ S D + K+WD+R R + + H V VKF P
Sbjct: 401 FLEGHLKEIYGISFSP-NGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEP 458
Query: 247 HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELV 305
+ L + +YD T +W L H + +G+D+S +G L+A+ +D
Sbjct: 459 IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK-VMGLDISS--DGQLIATCSYDRTF 515
Query: 306 YVW 308
+W
Sbjct: 516 KLW 518
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 62 GVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
GVYD+A+ + SL D +++D T I L H +E++ ++P
Sbjct: 366 GVYDIAFHQD-GSLAGTGGLDAFGRVWDLR---TGRCIMFLEGHLKEIYGISFSPNGYH- 420
Query: 122 FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
T S D+T K+W + + V T H V + P H D + + D T +IW
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG 480
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ HE +++ D + D LIA+ S D++ K+W
Sbjct: 481 WSPLKTLAGHEGKVMGLDISS-DGQLIATCSYDRTFKLW 518
Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 58/252 (23%), Positives = 103/252 (40%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT------RRDSFITS 125
+ +L A G K++ P + + +L H V + ++P ++D + S
Sbjct: 241 NSKMLATACWSGLCKLWSV---PDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 297
Query: 126 -SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASG-DCTLRIWDVREMG 183
+ D +VKLW++D V + H V W+P S F + D + R+WD+
Sbjct: 298 CAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQE 355
Query: 184 STMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVK 243
+ H + +++ D L + +D ++WD+R R I L GH + +
Sbjct: 356 EILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRC-IMFLEGHLKEIYGIS 413
Query: 244 FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDE 303
FSP+ ++ A+ S D T +WD + V H GV + L + +D
Sbjct: 414 FSPNGYHI-ATGSGDNTCKVWDLR-QRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDN 471
Query: 304 LVYVWQQ-GMDP 314
+W G P
Sbjct: 472 TAKIWTHPGWSP 483
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 195 (73.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/209 (27%), Positives = 102/209 (48%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP---IRSLHEHTREVHSADYNPTRR 119
V +A S + +I++ D +V ++ +P RSL H+ V D +
Sbjct: 24 VTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQ--DVVISHD 81
Query: 120 DSF-ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD 178
F ++ SWD+T++LW + + S R FK H V + ++ + + S S D T+++W+
Sbjct: 82 GQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQII-SGSRDATIKVWN 140
Query: 179 -VREMGSTMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG 236
+ E T+ P AH+ + ++C + I S S D +KIWD+++++ + + G
Sbjct: 141 TLGECKFTLEGPEAHQ-DWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTG 199
Query: 237 YAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
Y V V SP +L AS D CLW+
Sbjct: 200 Y-VNTVTISPDG-SLCASGGKDTFACLWE 226
Score = 175 (66.7 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 63/221 (28%), Positives = 104/221 (47%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV-------RTFKEHAYC 151
+ SL H V S +P D+ I+SS D TV +W + PT R+ K H++
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLT-PTDATSPGKAHRSLKGHSHF 72
Query: 152 VYNATWNPRHSDVFC-SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIAS 210
V + + H F S S D TLR+WD+ + ST + H ++++ ++ D+ I S
Sbjct: 73 VQDVVIS--HDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSS-DNRQIIS 129
Query: 211 ASVDKSIKIWD-VRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 269
S D +IK+W+ + + + H V ++FSP+ +++ S+D V +WD
Sbjct: 130 GSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSG-SWDNKVKIWDIKSF 188
Query: 270 DALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
DH T + V +S +G L AS G D +W+
Sbjct: 189 KCNHTLTDH-TGYVNTVTISP--DGSLCASGGKDTFACLWE 226
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 46/178 (25%), Positives = 76/178 (42%)
Query: 52 TELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHS 111
T L T D V +A+S S + +I+ D ++K+++T L + H V
Sbjct: 105 TRLFKGHTQD-VMSVAFS-SDNRQIISGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSC 161
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
++P + ++ SWD+ VK+W + T +H V T +P S C++ G
Sbjct: 162 IRFSPNT-PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGS--LCASGGK 218
Query: 172 CTLR-IWDVREMGSTMIIPAHE-FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV 227
T +W++ + A LA NKY SA+ D I IWD+ +V
Sbjct: 219 DTFACLWELSSGKPLYKLEARNTINALAFSPNKY----WLSAATDDKIIIWDLLTKQV 272
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 197 (74.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 59/192 (30%), Positives = 97/192 (50%)
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ + +C ++ D ++ S K++ +WD+ Y + I L GH + V FSP
Sbjct: 212 GHQNWVYSCAFSP-DSSMLCSVGASKAVFLWDMDKYTM-IRKLEGHHHDVVACDFSPDGA 269
Query: 250 NLLASCSYDMTVCLWDFMVEDALVGRYDH----HTE-FAVGVD------MSVLVEGL-LA 297
LLA+ SYD V +WD D L+ + H T FA G + +S +GL +A
Sbjct: 270 -LLATASYDTRVYIWDPHTGDILM-EFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 298 STGWDELVYVWQ 309
S D++V W+
Sbjct: 328 SLADDKMVRFWR 339
Score = 179 (68.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 67/252 (26%), Positives = 110/252 (43%)
Query: 73 DSLLIAA-VADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
D LL+A + +G +KI+D T + +L +HT V + P +++S D T+
Sbjct: 139 DQLLLATGLNNGRIKIWDVY---TGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 132 KLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
++W + D ++ + H VY+ ++P S + CS + +WD+ + +
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSP-DSSMLCSVGASKAVFLWDMDKYTMIRKLEG 254
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRN----------YRVPIAVLNG--HGYA 238
H +++ACD++ D L+A+AS D + IWD + P + G +
Sbjct: 255 HHHDVVACDFSP-DGALLATASYDTRVYIWDPHTGDILMEFGHLFPPPTPIFAGGANDRW 313
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--ALVGRYDHHTEFAVGVDMSVLVEGLL 296
VR V FS H +AS + D V W + ED V + A D SVL G
Sbjct: 314 VRSVSFS-HDGLHVASLADDKMVRFWR-IDEDYPVQVAPLSNGLCCAFSTDGSVLAAGT- 370
Query: 297 ASTGWDELVYVW 308
D VY W
Sbjct: 371 ----HDGSVYFW 378
Score = 159 (61.0 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 69/261 (26%), Positives = 121/261 (46%)
Query: 18 FYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLI 77
F + +L +AT N NGR+ + D+ L LV D + V DL ++ +L+
Sbjct: 136 FGQDQLLLATGLN-----NGRIKIWDVY-TGKLLLNLV--DHTEVVRDLTFAPDGSLILV 187
Query: 78 AAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTV 136
+A D +++++D L N ++ L H V+S ++P S + S V LW +
Sbjct: 188 SASRDKTLRVWD--LKDDGNMMKVLRGHQNWVYSCAFSPD--SSMLCSVGASKAVFLWDM 243
Query: 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD------VREMGSTMIIPA 190
D+ T +R + H + V ++P + + +AS D + IWD + E G P
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYIWDPHTGDILMEFGHLFPPPT 302
Query: 191 HEFEILACD-WNK-----YDDCLIASASVDKSIKIWDV-RNYRVPIAVLNGHGYAVRKVK 243
F A D W + +D +AS + DK ++ W + +Y V +A L+ +G
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAPLS-NGLCCA--- 358
Query: 244 FSPHRRNLLASCSYDMTVCLW 264
FS ++LA+ ++D +V W
Sbjct: 359 FSTDG-SVLAAGTHDGSVYFW 378
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 168 (64.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 38 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 94
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 95 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 153
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 154 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 210
Query: 277 DHHTE 281
+H E
Sbjct: 211 EHVVE 215
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 56 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 111
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 112 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 170
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 171 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 221
Score = 138 (53.6 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 86 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 140
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 141 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 199
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 200 TKECKAELREHEHVVECISW 219
Score = 130 (50.8 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 57 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 114
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 115 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 155
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 178 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 236
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 237 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 295
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 296 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 345
Score = 102 (41.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 246 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 303
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 304 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 343
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 55/216 (25%), Positives = 97/216 (44%)
Query: 52 TELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHS 111
T L A D + V + WS + DS ++ G VK + + + N ++ H +
Sbjct: 182 TILQAHDIS--VRTMVWSHN-DSWMVTGDHGGYVKYWQSNM----NNVKMYQAHKEAIRG 234
Query: 112 ADYNPTRRDS-FITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFC-SAS 169
++PT DS F++ S D T+++W R R + H V W+P+ + S
Sbjct: 235 ISFSPT--DSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKD 292
Query: 170 GDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPI 229
++IWD + + + AH+ ++ WN + L+ +AS D +K++D+RN R +
Sbjct: 293 NQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLV-TASRDHLLKLFDIRNLREEV 351
Query: 230 AVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
V GH V + P L S D ++ W+
Sbjct: 352 QVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN 387
Score = 189 (71.6 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 68/256 (26%), Positives = 113/256 (44%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ LAW+ L+ A + G +++ T N L H V + ++ DS+
Sbjct: 149 IFTLAWTPEGRRLVTGA-SSGEFTLWNGL---TFNFETILQAHDISVRTMVWS--HNDSW 202
Query: 123 -ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
+T VK W + +V+ ++ H + +++P S F S S D TLRIWD
Sbjct: 203 MVTGDHGGYVKYWQSNM-NNVKMYQAHKEAIRGISFSPTDSK-FVSGSDDGTLRIWDFMR 260
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKS--IKIWDVRNYRVPIAVLNGHGYAV 239
++ H ++ W+ +I S S D IKIWD ++ + +A L+ H V
Sbjct: 261 CQEERVLRGHGADVKCVHWHPQKG-MIVSGSKDNQQPIKIWDPKS-GIALATLHAHKSTV 318
Query: 240 RKVKFSPHRRNLLASCSYDMTVCLWDF--MVEDALVGRYDHHTEFAVGVDMSVLVEGLLA 297
+K++ + N L + S D + L+D + E+ V R H + A V + EGL
Sbjct: 319 MDLKWNDNG-NWLVTASRDHLLKLFDIRNLREEVQVFR--GHKKEASSVSWHPIHEGLFC 375
Query: 298 STGWDELVYVWQQGMD 313
S G D + W G D
Sbjct: 376 SGGSDGSILFWNVGTD 391
Score = 142 (55.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 39/144 (27%), Positives = 70/144 (48%)
Query: 85 VKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV-DRPTSVR 143
+KI+D P + + +LH H V +N + +T+S D +KL+ + + V+
Sbjct: 297 IKIWD---PKSGIALATLHAHKSTVMDLKWNDNG-NWLVTASRDHLLKLFDIRNLREEVQ 352
Query: 144 TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV---REMGSTMIIPAHEFEILACDW 200
F+ H + +W+P H +FCS D ++ W+V +E+G + AH+ + W
Sbjct: 353 VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGC--VETAHDSIVWTLAW 410
Query: 201 NKYDDCLIASASVDKSIKIWDVRN 224
+ ++ S S D +IK W RN
Sbjct: 411 HPLGH-ILCSGSNDHTIKFW-TRN 432
Score = 131 (51.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V DL W+++ + L+ A D +K++D + ++ H +E S ++P F
Sbjct: 318 VMDLKWNDN-GNWLVTASRDHLLKLFD--IRNLREEVQVFRGHKKEASSVSWHPIHEGLF 374
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
+ D ++ W V + + H V+ W+P + CS S D T++ W
Sbjct: 375 CSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPL-GHILCSGSNDHTIKFWTRNR 433
Query: 182 MGSTM-------IIPAHEFEILACDWNKYDDCLI 208
G M +PA + A D +YDD +I
Sbjct: 434 PGDLMRDKYNLNTLPA---SLAALDECEYDDAII 464
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 240 RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEF 282
+K +F P + N C ++ C F+ +TEF
Sbjct: 647 KKSRFEPRQHNAQLVCVRELMQCKKPFLQSLVAAKAQQPNTEF 689
>UNIPROTKB|Q5ZMV9 [details] [associations]
symbol:WDR24 "WD repeat-containing protein 24" species:9031
"Gallus gallus" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 eggNOG:NOG299301 EMBL:AJ719275
IPI:IPI00651573 RefSeq:NP_001025799.1 UniGene:Gga.22342
ProteinModelPortal:Q5ZMV9 Ensembl:ENSGALT00000003862 GeneID:416406
KEGG:gga:416406 CTD:84219 GeneTree:ENSGT00650000093352
HOGENOM:HOG000234392 HOVERGEN:HBG080644 InParanoid:Q5ZMV9
OMA:HALYDSR OrthoDB:EOG48WC1D NextBio:20819868 Uniprot:Q5ZMV9
Length = 705
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 50/217 (23%), Positives = 96/217 (44%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVK 132
++LL A +G V ++ P + EH R V+ ++PT ++ S D +K
Sbjct: 3 ENLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMK 62
Query: 133 LWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS-TMIIPAH 191
+ + + SV TF + V + ++ R F + + +++WD+R + AH
Sbjct: 63 CFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRYERMFTAH 122
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNL 251
+ CDW+ D +A+ DK +K+WD+ R +V +VK+ P ++
Sbjct: 123 NGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECKHH 182
Query: 252 LASCSY--DMTVCLWDFMVEDALVGRYDHHTEFAVGV 286
+A+CS D + +WD ++ H + G+
Sbjct: 183 IATCSMMVDHNIYVWDVRRPFIPSAMFEEHKDVTTGI 219
>DICTYBASE|DDB_G0276797 [details] [associations]
symbol:lysA "peptidoglycan-binding LysM
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002482 InterPro:IPR015943 InterPro:IPR018392
Pfam:PF00400 Pfam:PF01476 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00257 SMART:SM00320 dictyBase:DDB_G0276797
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0016998 InterPro:IPR006571 Pfam:PF07534
SMART:SM00584 RefSeq:XP_642883.1 ProteinModelPortal:Q7KWK0
EnsemblProtists:DDB0185074 GeneID:8620749 KEGG:ddi:DDB_G0276797
InParanoid:Q7KWK0 OMA:HIRHITS Uniprot:Q7KWK0
Length = 1405
Score = 203 (76.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 61/239 (25%), Positives = 113/239 (47%)
Query: 58 DTAD---GVYDLAWSESHD---SLLIAAVADGSVKIYDTALPPTANP--IRSLHEHTREV 109
DT D + D A S S++ L + + S T PT P + L +++E+
Sbjct: 56 DTQDDKISIIDEASSSSNNISKGFLSSHHSSSSSSTTTTTSSPTTTPCIFKKLKSNSKEI 115
Query: 110 HS--ADYNPTRRDS--FITSSWDD-TVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSD 163
++ + +S ++SS D ++ LW V D V+ K H + + +WN + ++
Sbjct: 116 ECDLLKWSTNKSESHLLVSSSLKDYSIYLWNVRDEKLIVKFSKSHIRHITSLSWNTQETN 175
Query: 164 VFCSASGDCTLRIWDVRE--MGSTMIIPAHEFE--ILACDWNKYDDCLIASASVDKSIKI 219
+ SAS DC I+D+RE GS I + + WN ++A+++ + I
Sbjct: 176 LIASASSDCMANIFDIRERTQGSGGISTNFKARSNLSQIAWNPNSSTMLATSNASE-FNI 234
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCS-YDMTVCLWDFMVEDALVGRYD 277
WD+R + P++ ++ H ++ +++SP RN L +C + V +WD L+ RY+
Sbjct: 235 WDIRKFGSPLSCVSAHIGSISNIEWSPKERNQLLTCGPTEKCVKVWDVTPPSNLLHRYN 293
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 163 (62.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 49/184 (26%), Positives = 88/184 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++ +
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD-Q 160
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ S S D T+++WD + + H+ + + D ++ SAS DK++K+W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTMKMW 219
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRYD 277
+V + GH VR V+ P++ LLASCS D TV +W ++ A + ++
Sbjct: 220 EVATGYC-VKTFTGHREWVRMVR--PNQDGTLLASCSNDQTVRVWVVATKECKAELREHE 276
Query: 278 HHTE 281
H E
Sbjct: 277 HVVE 280
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/178 (27%), Positives = 82/178 (46%)
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
K W + RP H V ++P S + SAS D T+++WD + H
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFS-LMVSASEDATIKVWDYEAGDFERTLKGH 149
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNL 251
+ +++ L+AS S D +IK+WD + + I ++GH + V V P+ ++
Sbjct: 150 TDSVQDISFDQTGK-LLASCSADMTIKLWDFQGFEC-IRTMHGHDHNVSSVAIMPNGDHI 207
Query: 252 LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
+ S S D T+ +W+ + V + H E+ V + +G LLAS D+ V VW
Sbjct: 208 V-SASRDKTMKMWE-VATGYCVKTFTGHREWVRMVRPNQ--DGTLLASCSNDQTVRVW 261
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 46/173 (26%), Positives = 80/173 (46%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
SL+++A D ++K++D + R+L HT V ++ T + + S D T+KL
Sbjct: 121 SLMVSASEDATIKVWDYE---AGDFERTLKGHTDSVQDISFDQTGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D L+AS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLLASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 133 (51.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 39/140 (27%), Positives = 63/140 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ ++ LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDQT-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN-QDGTLLASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 133 (51.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 93 PPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152
P +A+P ++ E T + P ++ S D T+K+W + + T H V
Sbjct: 286 PESAHP--TISEATGSENKKSGKPG--PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWV 341
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212
++P V S + D TLRIWD + + AHE + + D++K ++ + S
Sbjct: 342 RGVLFHPGGRFVV-SCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVV-TGS 399
Query: 213 VDKSIKIWDVR 223
VD+++K+W+ R
Sbjct: 400 VDQTVKVWECR 410
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
L+ SAS D +IK+WD L GH +V+ + F + LLASCS DMT+ LWDF
Sbjct: 122 LMVSASEDATIKVWDYEAGDFE-RTLKGHTDSVQDISFDQTGK-LLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTMKMWE 220
Score = 109 (43.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WD+ + + L GH VR V F P R + SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDIST-GMCLMTLVGHDNWVRGVLFHPGGR-FVVSCADDKTLRIWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + H F +D + + D+ V VW+
Sbjct: 369 NKRCMK-TLSAHEHFVTSLDFHK-ASPYVVTGSVDQTVKVWE 408
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 138 (53.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 191 (72.3 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 70/254 (27%), Positives = 125/254 (49%)
Query: 63 VYDLAWSESHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDS 121
VY + +S D IA+ + D ++ +++ I L H V A + + D+
Sbjct: 40 VYSINFSS--DGKYIASSSFDMTIMVHNVY--NECETIGVLRGHKNAVLQAKW--LQDDN 93
Query: 122 FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+I S S D + LW V+ + +R+FK H V N H+ +F S S D TL+ WD+R
Sbjct: 94 YICSASADHKLFLWDVECESKLRSFKGHDNIV-NGLDIINHN-LFVSCSDDNTLKFWDIR 151
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVR 240
+ II H+F +L+ +K + L S VD +IK +D +NY++ + GH +
Sbjct: 152 SKWAVHIIK-HDFPLLSVCSDKKGEFLFTSC-VDNTIKKYDCKNYKLKDTFI-GHKDYIT 208
Query: 241 KVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRYD---HHTEFAVGVDMSVLVEG 294
+ + +LAS S D ++C WD F E+ L+ + + ++ ++ + + +S +
Sbjct: 209 GLDINKDE-TMLASISADESICFWDIQPFSCEEKLLFQLNSPKYNIDYNL-IKLSFNNDN 266
Query: 295 LLASTGWDELVYVW 308
LLA D +Y++
Sbjct: 267 LLACGSGDNYLYIY 280
Score = 154 (59.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 63/254 (24%), Positives = 115/254 (45%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
+ V W + D+ + +A AD + ++D + +RS H V+ D +
Sbjct: 81 NAVLQAKWLQD-DNYICSASADHKLFLWDVECE---SKLRSFKGHDNIVNGLDI--INHN 134
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
F++ S D+T+K W + +V K H + + + + + +F S D T++ +D +
Sbjct: 135 LFVSCSDDNTLKFWDIRSKWAVHIIK-HDFPLLSVCSDKKGEFLFTSCV-DNTIKKYDCK 192
Query: 181 --EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP---IAVLNGH 235
++ T I H+ I D NK D+ ++AS S D+SI WD++ + + LN
Sbjct: 193 NYKLKDTFI--GHKDYITGLDINK-DETMLASISADESICFWDIQPFSCEEKLLFQLNSP 249
Query: 236 GYAV--RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
Y + +K S + NLLA S D + ++D+ + L HT V VE
Sbjct: 250 KYNIDYNLIKLSFNNDNLLACGSGDNYLYIYDYK-QKILKYSLPGHTSTINDVAFHP-VE 307
Query: 294 GLLASTGWDELVYV 307
++AS D +++
Sbjct: 308 DIVASCSSDHTIFL 321
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 185 TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKF 244
TM+I +H+ E+ + +++ D IAS+S D +I + +V N I VL GH AV + K+
Sbjct: 30 TMLINSHKGEVYSINFSS-DGKYIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKW 88
Query: 245 SPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDEL 304
N + S S D + LWD E L + H G+D ++ L S D
Sbjct: 89 LQDD-NYICSASADHKLFLWDVECESKLRS-FKGHDNIVNGLD--IINHNLFVSCSDDNT 144
Query: 305 VYVW 308
+ W
Sbjct: 145 LKFW 148
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 196 (74.1 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 64/230 (27%), Positives = 100/230 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEH-----------TREVHS 111
V+ AW+ D LL + D + +I++ + T+ + + H ++V S
Sbjct: 172 VFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTS 230
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGD 171
D+N + T S+D ++WT D + T +H ++ WN + + + SA D
Sbjct: 231 LDWN-SEGTLLATGSYDGFARIWTKDGNLA-STLGQHKGPIFALKWNKKGNFIL-SAGVD 287
Query: 172 CTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV 231
T IWD + P H L DW + AS S D I + + R PI
Sbjct: 288 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT--FASCSTDMCIHVCKLGQDR-PIKT 344
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE 281
GH V +K+ P NLLASCS DMT+ +W M +D+ V H +
Sbjct: 345 FQGHTNEVNAIKWDP-TGNLLASCSDDMTLKIWS-MKQDSCVHDLQAHNK 392
Score = 179 (68.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
++ L W++ + +L A V D + I+D T + H+ D+ ++F
Sbjct: 269 IFALKWNKKGNFILSAGV-DKTTIIWDAH---TGEAKQQFPFHSAPALDVDWQSN--NTF 322
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+ S D + + + + ++TF+ H V W+P ++ S S D TL+IW +++
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQD 381
Query: 183 GSTMIIPAHEFEILACDW--------NKYDDCLIAS---ASVDKSIKIWDVRNYRVPIAV 231
+ AH EI W N + ++AS AS D ++++WDV + + I
Sbjct: 382 SCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDV-DRGICIHT 440
Query: 232 LNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
L H V V FSP R LAS S+D V +W+ ALV Y
Sbjct: 441 LTKHQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 483
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 65/259 (25%), Positives = 110/259 (42%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ S +LL DG +I+ N +L +H + + +N ++ +F
Sbjct: 228 VTSLDWN-SEGTLLATGSYDGFARIWTK----DGNLASTLGQHKGPIFALKWN--KKGNF 280
Query: 123 ITSSW-DDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVRE 181
I S+ D T +W + + F H+ + W + ++ F S S D + + + +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--QSNNTFASCSTDMCIHVCKLGQ 338
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
H E+ A W+ + L+AS S D ++KIW ++ + L H +
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGN-LLASCSDDMTLKIWSMKQDSC-VHDLQAHNKEIYT 396
Query: 242 VKFSPH-------RRNL----LASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSV 290
+K+SP NL L S S+D TV LWD + + H E V S
Sbjct: 397 IKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWD-VDRGICIHTLTKHQEPVYSVAFSP 455
Query: 291 LVEG-LLASTGWDELVYVW 308
+G LAS +D+ V++W
Sbjct: 456 --DGRYLASGSFDKCVHIW 472
Score = 124 (48.7 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 51/196 (26%), Positives = 85/196 (43%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
+HV L P T T + V + W + +LL + D ++KI+
Sbjct: 331 IHVCKLGQDRPIKT--FQGHTNE-VNAIKWDPT-GNLLASCSDDMTLKIWSMKQDSC--- 383
Query: 99 IRSLHEHTREVHSADYNPTRRD-----------SFITSSWDDTVKLWTVDRPTSVRTFKE 147
+ L H +E+++ ++PT S ++S+D TV+LW VDR + T +
Sbjct: 384 VHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTK 443
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H VY+ ++P S S D + IW+ + G+ + I WN D +
Sbjct: 444 HQEPVYSVAFSP-DGRYLASGSFDKCVHIWNT-QTGALVHSYRGTGGIFEVCWNAAGDKV 501
Query: 208 IASASVDKSIKIWDVR 223
ASAS D S+ + D+R
Sbjct: 502 GASAS-DGSVCVLDLR 516
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/155 (27%), Positives = 76/155 (49%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T PI +L H+ V S ++ D ++SWD +K+W V+ T T + V+N
Sbjct: 246 TRIPIVTLSGHSEAVSSVLWSDV--DEICSASWDHNIKIWDVETGTVKSTLAGNK--VFN 301
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKYDDCLIAS 210
+++P S S S D +R+WD R ++++ +H + + W+ + + S
Sbjct: 302 CISYSPL-SQRLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVS 360
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
S+DK +K+WD R+ + P+ L H V V ++
Sbjct: 361 GSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWT 395
Score = 156 (60.0 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 53/171 (30%), Positives = 78/171 (45%)
Query: 144 TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILAC-DWNK 202
T H+ V + W+ D CSAS D ++IWDV E G+ A ++ C ++
Sbjct: 252 TLSGHSEAVSSVLWSD--VDEICSASWDHNIKIWDV-ETGTVKSTLAGN-KVFNCISYSP 307
Query: 203 YDDCLIASASVDKSIKIWDVRNY--RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMT 260
L AS S D+ I++WD R+ + + L H V VK+SP L S S D
Sbjct: 308 LSQRL-ASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKL 366
Query: 261 VCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
V LWD YD H++ + VD + GL+ S G D +Y ++
Sbjct: 367 VKLWD--TRSCKAPLYDLAAHSDKVLSVDWTDA--GLILSGGSDNKLYSYR 413
Score = 81 (33.6 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 61 DGVYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHSADYN 115
+ V D+ W +S LL++A D ++++++ N I++LH H V S +
Sbjct: 141 EAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTE--RNKIKALHCCRGHAGSVDSIAVD 198
Query: 116 PTRRDSFITSSWDDTVKLWT 135
+R F + SWD +K+W+
Sbjct: 199 ASRT-KFCSGSWDKMLKIWS 217
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 167 (63.8 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SAS DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVEDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SAS D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 137 (53.3 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVEDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
+++S D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVEDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSASRDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 195 (73.7 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 67/239 (28%), Positives = 115/239 (48%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A P
Sbjct: 275 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASPTDITL 328
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 329 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 384
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 385 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 437
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 438 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 493
Score = 188 (71.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 69/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 211 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 264
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 265 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 318
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 319 DMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 374
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 375 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 430
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 431 SG--AYDGKIK-VWDLQAALDPRA 451
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 346 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 398
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 399 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 455
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 456 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAPN 501
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 195 (73.7 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 64/213 (30%), Positives = 104/213 (48%)
Query: 71 SHDSLLIAAV-ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD 129
S D+ +IA+ ADG+VK++ + T I + H + + ++P + I S DD
Sbjct: 185 SPDASMIASGGADGAVKVWAAS---TGKLIYTFEGHLAGISTISWSPD--GATIASGSDD 239
Query: 130 -TVKLWTVDRPTSVRT-FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI 187
T++LW V + T F H VY ++P+ ++ S S D + +WDVR
Sbjct: 240 KTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPK-GNMLVSGSYDEAVFLWDVRSARVMKS 298
Query: 188 IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH 247
+PAH + D +D LIAS + D ++IWD + +++ V VKFSP+
Sbjct: 299 LPAHSDPVSGIDV-VWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPN 357
Query: 248 RRNLLASCSYDMTVCLWDFMVEDALVGRYDHHT 280
+ +LA + D V LWD+ VE + Y H+
Sbjct: 358 GKYVLA-WTLDDCVRLWDY-VEGRCLKTYQGHS 388
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/150 (32%), Positives = 71/150 (47%)
Query: 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD 221
+ + S D +++W H I W+ D IAS S DK+I++W+
Sbjct: 188 ASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSP-DGATIASGSDDKTIRLWN 246
Query: 222 VRNYRV-PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR-YDHH 279
V + P + H Y V + FSP + N+L S SYD V LWD V A V + H
Sbjct: 247 VLTGKAHPTPFIGHHNY-VYAIAFSP-KGNMLVSGSYDEAVFLWD--VRSARVMKSLPAH 302
Query: 280 TEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
++ G+D V+ +G L+AS D LV +W
Sbjct: 303 SDPVSGID--VVWDGTLIASCATDGLVRIW 330
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 195 (73.7 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 58/205 (28%), Positives = 102/205 (49%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
+ L++ D S+ ++D A P + R L H V+ D++ D +I S S D T+
Sbjct: 315 NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFD----DKYIVSASGDRTI 370
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPA 190
K+W+ VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 371 KVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLEG 426
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVR---NYRVP-----IAVLNGHGYAVRKV 242
HE E++ C ++D+ I S + D IK+WD++ + R P + L H V ++
Sbjct: 427 HE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 483
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFM 267
+F + + S S+D T+ +WDF+
Sbjct: 484 QFDEFQ---IISSSHDDTILIWDFL 505
Score = 189 (71.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 70/264 (26%), Positives = 118/264 (44%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D T ++ L HT V Y+
Sbjct: 223 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKQ---TLECLKILTGHTGSVLCLQYDER 276
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + + + + + S D ++ +W
Sbjct: 277 ---VIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC---NGLMVTCSKDRSIAVW 330
Query: 178 DVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ ++ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 331 DMASPTDISLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 386
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 387 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 442
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 443 SG--AYDGKIK-VWDLQAALDPRA 463
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 40/162 (24%), Positives = 76/162 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 358 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 410
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 467
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
+ + H + ++D+ I S+S D +I IWD N
Sbjct: 468 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN 506
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 149 (57.5 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 49/176 (27%), Positives = 77/176 (43%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T + T H V + W +D CSAS D T+R+WD G + + + C
Sbjct: 247 TPLMTLSGHNEAVSSVLW--MDADELCSASWDHTIRLWDAETGGQKSTLSGSK--VFNCI 302
Query: 200 WNKYDD-CL-IASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKVKFSPHRRNLLASC 255
Y C +AS S D+ +++WD R+ + +L+ H V V+++P + L S
Sbjct: 303 --SYSPLCRRLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSG 360
Query: 256 SYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
S D V LWD YD H + + D + GL+ S G D +Y ++
Sbjct: 361 SLDNVVKLWD--TRSCKAPLYDLAAHEDKVLCADWTE--NGLILSGGADNKLYTYR 412
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 37/145 (25%), Positives = 66/145 (45%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T P+ +L H V S + D ++SWD T++LW + T V+N
Sbjct: 245 TRTPLMTLSGHNEAVSSVLWMDA--DELCSASWDHTIRLWDAETGGQKSTLSGSK--VFN 300
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKYDDCLIAS 210
+++P + S S D +R+WD R ++++ +H + A W + + S
Sbjct: 301 CISYSPLCRRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVS 359
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGH 235
S+D +K+WD R+ + P+ L H
Sbjct: 360 GSLDNVVKLWDTRSCKAPLYDLAAH 384
Score = 88 (36.0 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 60 ADGVYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHSADY 114
AD V D+AW + +S+L+ A D +V +++ N +++ H H V +
Sbjct: 140 ADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWN--SERNKVKARHCCRGHAGSVDTIAV 197
Query: 115 NPTRRDSFITSSWDDTVKLWT 135
+PTR F + SWD +K+W+
Sbjct: 198 DPTRT-KFCSGSWDKMLKIWS 217
Score = 68 (29.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 226 RVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
R P+ L+GH AV V + + L S S+D T+ LWD
Sbjct: 246 RTPLMTLSGHNEAVSSVLWMD--ADELCSASWDHTIRLWD 283
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 192 (72.6 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 64/232 (27%), Positives = 96/232 (41%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T NP L H +E ++P T D T VRT+ H+ V +
Sbjct: 161 TVNPQMELLGHKQEGFGLSWSPHVAGHLATGR-DLTTYTKNNKALQPVRTYTHHSSIVND 219
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA----HEFEILACDWNKYDDCLIAS 210
+P HS + + S D TL+I D R +T H I A +N + ++A+
Sbjct: 220 VQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVLAT 279
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM--- 267
S DK+I +WD+RN + + L H +V + + P +LAS SYD + WD
Sbjct: 280 GSADKTIGLWDLRNLKTKLHTLENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRAG 339
Query: 268 ----VEDALVGR----YDH--HTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
EDA G + H HT ++ +L S D L+ VW+
Sbjct: 340 EEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWK 391
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 44/176 (25%), Positives = 72/176 (40%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH-EHTREVHSADYNPTRRDS 121
V D+ H SL+ D +++I DT + T + +H +++ +NP
Sbjct: 217 VNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETV 276
Query: 122 FITSSWDDTVKLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
T S D T+ LW + + T + T + H V + +W+P V SAS D + WD+
Sbjct: 277 LATGSADKTIGLWDLRNLKTKLHTLENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLS 336
Query: 181 EMGSTMII------P--------AHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
G P H I WN D ++ SA+ D +++W V
Sbjct: 337 RAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWKV 392
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 194 (73.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 58/205 (28%), Positives = 101/205 (49%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
+ L++ D S+ ++D A P R L H V+ D++ D +I S S D T+
Sbjct: 311 NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRTI 366
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPA 190
K+W+ VRT H + + R + S S D T+R+WD+ E G+ + ++
Sbjct: 367 KVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLEG 422
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVR---NYRVP-----IAVLNGHGYAVRKV 242
HE E++ C ++D+ I S + D IK+WD++ + R P + L H V ++
Sbjct: 423 HE-ELVRCI--RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL 479
Query: 243 KFSPHRRNLLASCSYDMTVCLWDFM 267
+F + + S S+D T+ +WDF+
Sbjct: 480 QFDEFQ---IISSSHDDTILIWDFL 501
Score = 188 (71.2 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 69/267 (25%), Positives = 119/267 (44%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 218 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 271
Query: 118 RRDSFITSSWDDTV-KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRI 176
+T S D TV ++W V+ + T H V + ++ + + + S D ++ +
Sbjct: 272 ---VIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAV 325
Query: 177 WDVR---EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
WD+ ++ ++ H + D +DD I SAS D++IK+W + LN
Sbjct: 326 WDMASPTDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLN 381
Query: 234 GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVL 291
GH + +++ R L+ S S D T+ LWD A + + H E + D +
Sbjct: 382 GHKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRI 437
Query: 292 VEGLLASTGWDELVYVW--QQGMDPRA 316
V G +D + VW Q +DPRA
Sbjct: 438 VSG-----AYDGKIKVWDLQAALDPRA 459
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 354 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 406
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 407 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 463
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 464 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAPN 509
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 50/185 (27%), Positives = 90/185 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H V ++P +++S D T+K+W + RT K H V + +++
Sbjct: 103 ALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-- 159
Query: 161 HSD-VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
HS + S S D T+++WD + + H+ + + D ++ SA+ DK+IK+
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKM 218
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN-LLASCSYDMTVCLWDFMVED--ALVGRY 276
W+V+ + GH VR V+ P++ L+ASCS D TV +W ++ A + +
Sbjct: 219 WEVQTGYC-VKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREH 275
Query: 277 DHHTE 281
+H E
Sbjct: 276 EHVVE 280
Score = 149 (57.5 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S++++A D ++K++D T + R+L HT V ++ + + + S D T+KL
Sbjct: 121 SVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKL 176
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W +RT H + V + P + D SA+ D T+++W+V+ H
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+ N+ D LIAS S D+++++W V A L H + V + ++P
Sbjct: 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECK-AELREHEHVVECISWAP 286
Score = 135 (52.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 39/140 (27%), Positives = 62/140 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+++ S LL + AD ++K++D IR++H H V S P D
Sbjct: 151 DSVQDISFDHS-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPNG-D 205
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
++++ D T+K+W V V+TF H V N + + S S D T+R+W V
Sbjct: 206 HIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVA 264
Query: 181 EMGSTMIIPAHEFEILACDW 200
+ HE + W
Sbjct: 265 TKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
++ SAS D +IK+WD L GH +V+ + F H LLASCS DMT+ LWDF
Sbjct: 122 VMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF 179
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ 309
+ + + H + ++++ G + S D+ + +W+
Sbjct: 180 QGFECIRTMHGHDHNVS---SVAIMPNGDHIVSAARDKTIKMWE 220
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 71 SHDSLLIAAVA-DGSVKIYDTALPPTANPIRSLHEHTRE------------VHSADYNPT 117
+ D LIA+ + D +V+++ A +R HEH E + A + T
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESSYSSISEATGSET 301
Query: 118 RRDS----FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDC 172
++ F+ S S D T+K+W V + T H V ++ + S + D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDK 360
Query: 173 TLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
TLR+WD + + AHE + + D++K ++ + SVD+++K+W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVWECR 410
Score = 102 (41.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
+ S S DK+IK+WDV + + L GH VR V F + +L SC+ D T+ +WD+
Sbjct: 311 LLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
+ + + H F +D ++ + D+ V VW+
Sbjct: 369 NKRCMK-TLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWE 408
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 149 (57.5 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/145 (24%), Positives = 71/145 (48%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T P+ +L HT + S ++ + ++SWD T+KLW + T + V+N
Sbjct: 234 TRTPLATLSGHTEAISSVLWSDA--EEICSASWDHTIKLWDAETGGLKSTLTGNK--VFN 289
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKYDDCLIAS 210
+ +++P + S S D +R+WD R ++++ +H + + W+ + + S
Sbjct: 290 SVSYSPLCRRL-ASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLIS 348
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGH 235
S+D +K+WD R+ + P+ L H
Sbjct: 349 GSLDNIVKLWDTRSCKAPLYDLAAH 373
Score = 147 (56.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T + T H + + W+ ++ CSAS D T+++WD G + ++ +
Sbjct: 236 TPLATLSGHTEAISSVLWSD--AEEICSASWDHTIKLWDAETGGLKSTLTGNKV-FNSVS 292
Query: 200 WNKYDDCL-IASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKVKFSPHRRNLLASCS 256
++ C +AS S D+ I++WD R+ + +L+ H V VK+SP + L S S
Sbjct: 293 YSPL--CRRLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGS 350
Query: 257 YDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
D V LWD YD H + + VD + GLL S G D +Y ++
Sbjct: 351 LDNIVKLWD--TRSCKAPLYDLAAHEDKVLCVDWTEA--GLLLSGGADNKLYCYR 401
Score = 88 (36.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 63 VYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHSADYNPT 117
V D+AW +S LLI+A D ++ +++ + N +++LH H V S + T
Sbjct: 131 VKDVAWVKQDSLSCLLISASMDQTILLWEWNVEK--NKVKALHCCRGHAGSVDSVAVDCT 188
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHA 149
R F + SWD +K+W+ PT E A
Sbjct: 189 RT-KFCSGSWDKMLKIWSAV-PTDEEDEMEEA 218
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 57/215 (26%), Positives = 102/215 (47%)
Query: 89 DTALP-PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE 147
+ ALP P I + H + ++S ++P+ +++S D T+K+W + RT K
Sbjct: 90 EDALPRPPEKHILTGHRNC--INSVKFHPSF-SLMVSASEDATIKVWDFESGEFERTLKG 146
Query: 148 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCL 207
H V + ++ + ++ S S D T+++WD + + H+ + + D L
Sbjct: 147 HTNAVQDIDFD-KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQL 205
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
I+S S DK+IK+W+ I L GH VRK+ S + +ASCS D T+ W+ +
Sbjct: 206 ISS-SRDKTIKVWEAATGYC-IKTLVGHEDWVRKITVSEDG-SCIASCSNDQTIKTWNIV 262
Query: 268 VEDALVGRYDH-HTEFAVGVDMSVLVE--GLLAST 299
+ L +H H + + +++ G L ST
Sbjct: 263 KGECLATYREHSHVVECLAFSTANIIDIPGSLLST 297
Score = 152 (58.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 46/172 (26%), Positives = 79/172 (45%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
SL+++A D ++K++D + R+L HT V D++ T + + S D T+KL
Sbjct: 119 SLMVSASEDATIKVWDFE---SGEFERTLKGHTNAVQDIDFDKTG-NLLASCSADLTIKL 174
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W V+T H + V + P D S+S D T+++W+ + HE
Sbjct: 175 WDFQTYDCVKTLHGHDHNVSCVRFTPS-GDQLISSSRDKTIKVWEAATGYCIKTLVGHED 233
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
+ ++ C IAS S D++IK W++ +A H + V + FS
Sbjct: 234 WVRKITVSEDGSC-IASCSNDQTIKTWNIVKGEC-LATYREHSHVVECLAFS 283
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 56/192 (29%), Positives = 88/192 (45%)
Query: 121 SFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
S I S S D T+K W + + + T++EH++ V C A T I D+
Sbjct: 245 SCIASCSNDQTIKTWNIVKGECLATYREHSHVVE------------CLAFS--TANIIDI 290
Query: 180 REMGSTMIIPAHEFEIL-ACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGY 237
GS + P + ++ N C +A+ S DK+IKIW++ R +A GH
Sbjct: 291 P--GSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRC-LATYIGHDN 347
Query: 238 AVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLA 297
VR V+F P + LL S D T+ +WD + + HT F +D L +A
Sbjct: 348 WVRAVRFHPCGKFLL-SVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFC-LHNPHIA 405
Query: 298 STGWDELVYVWQ 309
+ G D+++ VW+
Sbjct: 406 TGGVDDVIKVWK 417
Score = 141 (54.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 207 LIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
L+ SAS D +IK+WD + L GH AV+ + F NLLASCS D+T+ LWDF
Sbjct: 120 LMVSASEDATIKVWDFESGEFE-RTLKGHTNAVQDIDFDK-TGNLLASCSADLTIKLWDF 177
Query: 267 MVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
D + + H + V + + L++S+ D+ + VW+
Sbjct: 178 QTYDCVKTLHGHDHNVSC-VRFTPSGDQLISSSR-DKTIKVWE 218
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 57/192 (29%), Positives = 96/192 (50%)
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++
Sbjct: 152 IKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ + C ++ D ++ S K++ +WD+ Y + I L GH V +FSP
Sbjct: 212 GHQNWVYGCAFSP-DSSILCSVGASKAVFLWDMDKYSM-IRKLEGHHNDVVACEFSPDGA 269
Query: 250 NLLASCSYDMTVCLWDFMVEDALVGRYDH----HTE-FAVGVD------MSVLVEGL-LA 297
LLA+ SYD V +WD + ++ + H T FA G + +S +GL +A
Sbjct: 270 -LLATASYDTRVYVWDPYI-GVILREFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIA 327
Query: 298 STGWDELVYVWQ 309
S D++V W+
Sbjct: 328 SLADDKMVRFWR 339
Score = 176 (67.0 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 73 DSLLIAA-VADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
D LL+A + +G +KI+D T + +L +HT V + P +++S D T+
Sbjct: 139 DQLLLATGLNNGRIKIWDVY---TGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 132 KLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
++W + D ++ + H VY ++P S + CS + +WD+ + +
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYGCAFSP-DSSILCSVGASKAVFLWDMDKYSMIRKLEG 254
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWD------VRNYR------VPIAVLNGHGYA 238
H +++AC+++ D L+A+AS D + +WD +R + PI +
Sbjct: 255 HHNDVVACEFSP-DGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDRW 313
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLW 264
VR V FS H +AS + D V W
Sbjct: 314 VRSVSFS-HDGLHIASLADDKMVRFW 338
Score = 149 (57.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 62/231 (26%), Positives = 105/231 (45%)
Query: 18 FYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLI 77
F + +L +AT N NGR+ + D+ L L+ D + V DL ++ +L+
Sbjct: 136 FGQDQLLLATGLN-----NGRIKIWDVY-TGKLLLNLM--DHTEVVRDLTFAPDGSLILV 187
Query: 78 AAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSW--DDTVKLWT 135
+A D +++++D L N ++ L H V+ ++P DS I S V LW
Sbjct: 188 SASRDKTLRVWD--LKDDGNMMKVLRGHQNWVYGCAFSP---DSSILCSVGASKAVFLWD 242
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD------VREMGSTMIIP 189
+D+ + +R + H V ++P + + +AS D + +WD +RE G P
Sbjct: 243 MDKYSMIRKLEGHHNDVVACEFSPDGA-LLATASYDTRVYVWDPYIGVILREFGHLFPPP 301
Query: 190 AHEFEILACD-WNK-----YDDCLIASASVDKSIKIWDV-RNYRVPIAVLN 233
F A D W + +D IAS + DK ++ W + Y V +A LN
Sbjct: 302 TPIFAGGANDRWVRSVSFSHDGLHIASLADDKMVRFWRIDEEYPVQVAPLN 352
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 57/192 (29%), Positives = 96/192 (50%)
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++
Sbjct: 152 IKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ + C ++ D ++ S K++ +WD+ Y + I L GH V +FSP
Sbjct: 212 GHQNWVYGCAFSP-DSSILCSVGASKAVFLWDMDKYSM-IRKLEGHHNDVVACEFSPDGA 269
Query: 250 NLLASCSYDMTVCLWDFMVEDALVGRYDH----HTE-FAVGVD------MSVLVEGL-LA 297
LLA+ SYD V +WD + ++ + H T FA G + +S +GL +A
Sbjct: 270 -LLATASYDTRVYVWDPYI-GVILREFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIA 327
Query: 298 STGWDELVYVWQ 309
S D++V W+
Sbjct: 328 SLADDKMVRFWR 339
Score = 176 (67.0 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 73 DSLLIAA-VADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
D LL+A + +G +KI+D T + +L +HT V + P +++S D T+
Sbjct: 139 DQLLLATGLNNGRIKIWDVY---TGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 132 KLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
++W + D ++ + H VY ++P S + CS + +WD+ + +
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYGCAFSP-DSSILCSVGASKAVFLWDMDKYSMIRKLEG 254
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWD------VRNYR------VPIAVLNGHGYA 238
H +++AC+++ D L+A+AS D + +WD +R + PI +
Sbjct: 255 HHNDVVACEFSP-DGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDRW 313
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLW 264
VR V FS H +AS + D V W
Sbjct: 314 VRSVSFS-HDGLHIASLADDKMVRFW 338
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 189 (71.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 65/232 (28%), Positives = 101/232 (43%)
Query: 82 DGSVKIYD-TALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT 140
D V +Y T+ A R++ HT + Y P +T S D T LW V+
Sbjct: 133 DNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIY-PNSDQQILTGSGDSTCALWDVESGQ 191
Query: 141 SVRTFKEHAYCVYNATWNPRHS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
+++F H+ V P + + F S S D IWD+R H+ ++ +
Sbjct: 192 LLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVK 251
Query: 200 WNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHG--YAVRKVKFSPHRRNLLASCSY 257
++ D IA+ S D S +++D+R R +AV + V V FS R L A +
Sbjct: 252 FHPCGDA-IATGSDDSSCRLYDMRADR-EVAVFAKESIIFGVNSVDFSVSGRLLFAGYN- 308
Query: 258 DMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTG-WDELVYVW 308
D TV LWD + + + Y H + + + V +G STG WD + VW
Sbjct: 309 DYTVNLWDTLKSERVCLLYGHENKVSC---VQVSPDGTALSTGSWDYTIRVW 357
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/255 (27%), Positives = 109/255 (42%)
Query: 68 WSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT-SS 126
WS + I++ DG + I+D T N ++ T + + Y P+ +F+
Sbjct: 78 WSPDKRHI-ISSSQDGRLIIWDAF---TTNKEHAVTMPTTWIMACAYAPS--GNFVACGG 131
Query: 127 WDDTVKLW--TVDRPTSV--RTFKEH-AY---CVYNATWNPRHSDVFCSASGDCTLRIWD 178
D+ V ++ T D + RT H +Y C+Y P + SGD T +WD
Sbjct: 132 LDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIY-----PNSDQQILTGSGDSTCALWD 186
Query: 179 VREMGSTM-IIPAHEFEILACDW--NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH 235
V E G + H +++A D N+ + + S S D+ IWD+R+ V + GH
Sbjct: 187 V-ESGQLLQSFHGHSGDVMAIDLAPNETGNTFV-SGSCDRMAFIWDMRSGHV-VQSFEGH 243
Query: 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVG-VDMSVLVEG 294
V VKF P + +A+ S D + L+D + + F V VD SV G
Sbjct: 244 QSDVNSVKFHPCG-DAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSV--SG 300
Query: 295 LLASTGW-DELVYVW 308
L G+ D V +W
Sbjct: 301 RLLFAGYNDYTVNLW 315
>MGI|MGI:1917715 [details] [associations]
symbol:Wdr77 "WD repeat domain 77" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IGI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1917715 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0006357
GO:GO:0060770 GO:GO:0030374 GO:GO:0060528 CTD:79084
HOGENOM:HOG000035094 HOVERGEN:HBG052458 KO:K13221 OrthoDB:EOG4MPHQT
OMA:MRKETPP EMBL:AK012014 EMBL:AK032897 EMBL:AK048488 EMBL:AK050391
EMBL:AK163839 EMBL:AK169128 EMBL:BC005755 IPI:IPI00114819
RefSeq:NP_081708.1 UniGene:Mm.5110 ProteinModelPortal:Q99J09
SMR:Q99J09 IntAct:Q99J09 STRING:Q99J09 PhosphoSite:Q99J09
PaxDb:Q99J09 PRIDE:Q99J09 Ensembl:ENSMUST00000010278 GeneID:70465
KEGG:mmu:70465 UCSC:uc008qvo.1 GeneTree:ENSGT00390000010711
InParanoid:Q99J09 ChiTaRS:WDR77 NextBio:331685 Bgee:Q99J09
CleanEx:MM_WDR77 Genevestigator:Q99J09
GermOnline:ENSMUSG00000000561 Uniprot:Q99J09
Length = 342
Score = 188 (71.2 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 59 TADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSL-HEHTREVHSADYNPT 117
T GV DL W D ++ A G+V++++ T + +EH V + +
Sbjct: 79 TEAGVADLTWVG--DKGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVTVLSS 136
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+ ++ S D +K+W + + S+ +++ HA V +P VF S S D + +W
Sbjct: 137 GTQA-VSGSKDCCIKIWDLAQQVSLNSYRAHAGQVTCVAASPHKDSVFLSCSEDSRILLW 195
Query: 178 DVR--EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGH 235
D R + S M A + A W+ + + S+ + D +N ++ H
Sbjct: 196 DTRCPKPASQMACNASGYLPTALAWHPQQSEVFVFGDENGSVSLVDTKNASCTLSSAV-H 254
Query: 236 GYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGL 295
V ++ FSPH LL S S D ++ + D + + R H +F S L L
Sbjct: 255 SQGVTRLVFSPHSVPLLTSLSEDCSLAVLDSSLSEVFRSRA--HRDFVRDATWSPLNHSL 312
Query: 296 LASTGWDELV 305
L + GWD V
Sbjct: 313 LTTVGWDHQV 322
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/212 (27%), Positives = 102/212 (48%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W +++ A + S+ IY + T P ++ H EV+ ++PT S +
Sbjct: 412 DVDW---RNNVSFATSSTDSM-IYLCKIGET-RPAKTFTGHQGEVNCVKWDPT--GSLLA 464
Query: 125 SSWDD-TVKLWTVDRPTSVRTFKEHAYCVYNATW--------NPRHSDVFCSASGDCTLR 175
S DD T K+W + + T V +EH +Y W NP SAS D T++
Sbjct: 465 SCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVK 524
Query: 176 IWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
+WD E+G + H + + ++ + IAS S+DKSI IW ++ ++ + G
Sbjct: 525 LWDA-ELGKMLCSFNGHREPVYSLAFSPNGE-YIASGSLDKSIHIWSIKEGKI-VKTYTG 581
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 266
+G + +V ++ N +A+C D +VC+ DF
Sbjct: 582 NG-GIFEVCWNKEG-NKIAACFADNSVCVLDF 611
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 62/254 (24%), Positives = 110/254 (43%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V L W+ +LL DG +I+ I +L +H + S +N + D
Sbjct: 327 VTTLDWN-GEGTLLATGSCDGQARIWTL----NGELISTLSKHKGPIFSLKWNK-KGDYL 380
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM 182
+T S D T +W V + F+ H+ + W R++ F ++S D + + + E
Sbjct: 381 LTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDSMIYLCKIGET 438
Query: 183 GSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKV 242
H+ E+ W+ L+AS S D + KIW+++ + L H + +
Sbjct: 439 RPAKTFTGHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNIKQSTF-VHDLREHTKEIYTI 496
Query: 243 KFSP--------HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG 294
++SP +++ LAS S+D TV LWD + L ++ H E + S E
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCS-FNGHREPVYSLAFSPNGE- 554
Query: 295 LLASTGWDELVYVW 308
+AS D+ +++W
Sbjct: 555 YIASGSLDKSIHIW 568
Score = 144 (55.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 68 WSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT--------RR 119
W + SLL + D + KI++ + + L EHT+E+++ ++PT ++
Sbjct: 456 WDPT-GSLLASCSDDSTAKIWNIK---QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQ 511
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+ ++S+D TVKLW + + +F H VY+ ++P + + S S D ++ IW +
Sbjct: 512 LTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP-NGEYIASGSLDKSIHIWSI 570
Query: 180 REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
+E G + I WNK + IA+ D S+ + D R
Sbjct: 571 KE-GKIVKTYTGNGGIFEVCWNKEGN-KIAACFADNSVCVLDFR 612
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 188 (71.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/215 (27%), Positives = 103/215 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V + R
Sbjct: 94 TLKGHSGAVMELHYN-TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
+ C+ S D T+++WD+R+ S + +++L+ +N D +I S +D IK+W
Sbjct: 153 GPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQII-SGGIDNDIKVW 210
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRYD 277
D+R ++ I + GHG +V + S LL++ S D +V +WD F ++ V +
Sbjct: 211 DLRQNKL-IYSMQGHGDSVTGLSLSADGSYLLSN-SMDNSVRVWDIRPFAPKERCVKIFQ 268
Query: 278 ---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VY+W
Sbjct: 269 GNVHNFEKNL-LRCSWSADGSKIAAGSADRFVYIW 302
Score = 183 (69.5 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 59/200 (29%), Positives = 96/200 (48%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
SLL +A D +V ++D+ T ++ L HT V+S P RR + T S D TV
Sbjct: 112 SLLFSASTDKTVCVWDSE---TGERVKRLKGHTSFVNSCF--PARRGPQLACTGSDDGTV 166
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + SV TF ++ Y V + T+N SD S D +++WD+R+ + H
Sbjct: 167 KLWDIRKKASVHTF-QNTYQVLSVTFNDT-SDQIISGGIDNDIKVWDLRQNKLIYSMQGH 224
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYAVRKVKFS- 245
+ + D + S S+D S+++WD+R + V I N H + ++ S
Sbjct: 225 GDSVTGLSLSA-DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 246 PHRRNLLASCSYDMTVCLWD 265
+ +A+ S D V +WD
Sbjct: 284 SADGSKIAAGSADRFVYIWD 303
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/183 (27%), Positives = 86/183 (46%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D + + ++T +V S +N T D I+ D+ +K+W + +
Sbjct: 163 DGTVKLWDIRKKASVHTF----QNTYQVLSVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 217
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
+ + + H V + + S + S S D ++R+WD+R I H FE
Sbjct: 218 IYSMQGHGDSVTGLSLSADGSYLL-SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEK 276
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA+ S D+ + IWD R+ + L GH +V +V F P +L+
Sbjct: 277 NLLRCSWSA-DGSKIAAGSADRFVYIWDTTTRRI-VYKLPGHAGSVNEVAFHPEEPIVLS 334
Query: 254 SCS 256
S
Sbjct: 335 GSS 337
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/214 (25%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + +S +D + +W V + T K H+ V
Sbjct: 48 PIMLLSGHEGEVYCCKFHPNGA-TLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELH 106
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L + S D
Sbjct: 107 YNTDGSLLF-SASTDKTVCVWD-SETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDG 164
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + + + Y V V F+ +++ D + +WD ++ L+
Sbjct: 165 TVKLWDIRK-KASVHTFQ-NTYQVLSVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLIYS 220
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S +G L S D V VW
Sbjct: 221 MQGHGDSVTGLSLSA--DGSYLLSNSMDNSVRVW 252
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 189 (71.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 57/210 (27%), Positives = 109/210 (51%)
Query: 81 ADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVKLWTVDRP 139
+DG++KI+ +AL T +L H R + + ++ S+ DD T+++W ++
Sbjct: 74 SDGTIKIW-SAL--TFRLECTLFGHYRGISQVKW--ATGSKYLASASDDKTIRIWDFEKR 128
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
SVR K H V + +NP + + S S D T+RIW++++ ++PAH I++
Sbjct: 129 CSVRCLKGHTNYVSSIDFNPLGT-LLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVS 187
Query: 200 WNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDM 259
+ D L A+AS D +IWDV + + ++ + ++F+ +R+ LL S + +
Sbjct: 188 ISA-DGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVS-NLNS 245
Query: 260 TVCLWDFMVEDALVGRYDHH--TEFAVGVD 287
+ LWD+ + +V +D H T +++ D
Sbjct: 246 QIRLWDYR-RNRVVRIFDSHVNTRYSMSWD 274
Score = 159 (61.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 46/167 (27%), Positives = 75/167 (44%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H + V +P +R TSS D T+K+W+ T H + W
Sbjct: 49 TLFGHEKSVTCVSVSPNKR-WIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKW-AT 106
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIW 220
S SAS D T+RIWD + S + H + + D+N L+ S S D++++IW
Sbjct: 107 GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLV-SGSWDETVRIW 165
Query: 221 DVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
++++ + +L H + V S L A+ SYD +WD +
Sbjct: 166 NLQDGTC-LRMLPAHSEPIISVSISADG-TLCATASYDGMARIWDVL 210
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/101 (35%), Positives = 53/101 (52%)
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IA++S D +IKIW +R+ L GH + +VK++ + LAS S D T+ +WDF
Sbjct: 69 IATSSSDGTIKIWSALTFRLE-CTLFGHYRGISQVKWATGSK-YLASASDDKTIRIWDFE 126
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ V HT + +D + L LL S WDE V +W
Sbjct: 127 -KRCSVRCLKGHTNYVSSIDFNPLGT-LLVSGSWDETVRIW 165
>UNIPROTKB|I3LF05 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:FP016225 ProteinModelPortal:I3LF05 Ensembl:ENSSSCT00000028633
Uniprot:I3LF05
Length = 928
Score = 146 (56.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 165 FCSASGDCTLRIWDVREMGST-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
F S + +++WD+R + AH + CDW+ D +A+ DK +K+WD+
Sbjct: 317 FASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMT 376
Query: 224 NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTE 281
+R +V +VK+ P R+ LA+CS D + +WD ++ H +
Sbjct: 377 THRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRD 436
Query: 282 FAVGV------DMSVLVEGLLAST 299
G+ D S L+ G ST
Sbjct: 437 VTTGIAWRHPHDPSFLLSGSKDST 460
Score = 130 (50.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/151 (27%), Positives = 66/151 (43%)
Query: 119 RDSF-ITSSWDD-TVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLR 175
RD F S++++ V+LW + RP R F H V+ W+P + D ++
Sbjct: 312 RDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVK 371
Query: 176 IWDVREMGSTMIIPAHEFEILA-CDWNKYDDCLIASAS--VDKSIKIWDVRNYRVPIAVL 232
+WD+ + + +A W +A+ S VD +I +WDVR VP A+
Sbjct: 372 VWDMTTHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMF 431
Query: 233 NGHGYAVRKVKFS-PHRRNLLASCSYDMTVC 262
H + + PH + L S S D T+C
Sbjct: 432 EEHRDVTTGIAWRHPHDPSFLLSGSKDSTLC 462
Score = 98 (39.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G V ++ P + EH R V+ ++PT ++
Sbjct: 140 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 199
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHA 149
S D +K + + R SV TF A
Sbjct: 200 GSQDGFMKCFDLRRKDSVSTFSGEA 224
Score = 67 (28.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 23/75 (30%), Positives = 30/75 (40%)
Query: 234 GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
G +VR V+FS AS + V LWD D + H D
Sbjct: 299 GQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDR 358
Query: 294 GLLASTGWDELVYVW 308
G LA+ G D++V VW
Sbjct: 359 GWLATGGRDKMVKVW 373
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 188 (71.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/201 (29%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 123 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 177
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +V+TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 178 KLWDIRKKAAVQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYA--VRKVKF 244
+ + L+++A +D ++++WDVR + V I N H + + + +
Sbjct: 236 ADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 295 SPDGSKIAAG-SADRFVYVWD 314
Score = 188 (71.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 162
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 220
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 221 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCVKIF 278
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VYVW
Sbjct: 279 QGNVHNFEKNL-LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 174 DGTVKLWDIRKKAAVQTF----QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 228
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+R+WDVR I H FE
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 287
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA+ S D+ + +WD + RV + L GH ++ +V F P +L+
Sbjct: 288 NLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRV-LYKLPGHAGSINEVAFHPDEPIILS 345
Query: 254 SCS 256
+ S
Sbjct: 346 ASS 348
Score = 157 (60.3 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 55/214 (25%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + ++ +D + LW V + T K H+ V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 118 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + + + Y V V F+ +++ D + +WD ++ L
Sbjct: 176 TVKLWDIRK-KAAVQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 231
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V VW
Sbjct: 232 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVW 263
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 155 (59.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 57/176 (32%), Positives = 78/176 (44%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T V T H V + W+ ++ CSAS D T+R+WDV E GS ++ C
Sbjct: 248 TPVVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDV-ESGSLKSTLTGN-KVFNCI 303
Query: 200 WNKYDD-CL-IASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKVKFSPHRRNLLASC 255
Y C +AS S D+ I++WD R + L+ H V VK+SP L S
Sbjct: 304 --SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISG 361
Query: 256 SYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
S D V LWD YD H + + VD + GLL S G D +Y ++
Sbjct: 362 SLDNIVKLWD--TRSCKAPLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLYSYR 413
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/155 (23%), Positives = 75/155 (48%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T P+ +L H V S ++ + ++SWD T+++W V+ + T + V+N
Sbjct: 246 TRTPVVTLSGHMEAVSSVLWSDA--EEICSASWDHTIRVWDVESGSLKSTLTGNK--VFN 301
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMI---IPAHEFEILACDWNKYDDCLIAS 210
+++P + S S D +R+WD R +++ + +H + + W+ + + S
Sbjct: 302 CISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLIS 360
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
S+D +K+WD R+ + P+ L H V V ++
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Score = 77 (32.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 61 DGVYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHS--AD 113
D V D+AW +S LL++A D ++ +++ + N +++LH H V S D
Sbjct: 141 DVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVE--RNKVKALHCCRGHAGSVDSIAVD 198
Query: 114 YNPTRRDSFITSSWDDTVKLWT 135
+ T+ F + SWD +K+W+
Sbjct: 199 GSGTK---FCSGSWDKMLKIWS 217
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 189 (71.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 58/192 (30%), Positives = 97/192 (50%)
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ + +C ++ D ++ S K++ +W++ Y + I L GH + V FSP
Sbjct: 212 GHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKYTM-IRKLEGHHHDVVACDFSPDGA 269
Query: 250 NLLASCSYDMTVCLWDFMVEDALVGRYDH----HTE-FAVGVD------MSVLVEGL-LA 297
LLA+ SYD V +WD D L+ + H T FA G + +S +GL +A
Sbjct: 270 -LLATASYDTRVYIWDPHNGDILM-EFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 298 STGWDELVYVWQ 309
S D++V W+
Sbjct: 328 SLADDKMVRFWR 339
Score = 180 (68.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 73 DSLLIAA-VADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
D LL+A + +G +KI+D T + +L +HT V + P +++S D T+
Sbjct: 139 DQLLLATGLNNGRIKIWDVY---TGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 132 KLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
++W + D ++ + H VY+ ++P S + CS + +W++ + +
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRN----------YRVPIAVLNG--HGYA 238
H +++ACD++ D L+A+AS D + IWD N + P + G +
Sbjct: 255 HHHDVVACDFSP-DGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRW 313
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--ALVGRYDHHTEFAVGVDMSVLVEGLL 296
VR V FS H +AS + D V W + ED V + A D SVL G
Sbjct: 314 VRSVSFS-HDGLHVASLADDKMVRFWR-IDEDYPVQVAPLSNGLCCAFSTDGSVLAAGT- 370
Query: 297 ASTGWDELVYVW 308
D VY W
Sbjct: 371 ----HDGSVYFW 378
Score = 160 (61.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 69/261 (26%), Positives = 121/261 (46%)
Query: 18 FYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLI 77
F + +L +AT N NGR+ + D+ L LV D + V DL ++ +L+
Sbjct: 136 FGQDQLLLATGLN-----NGRIKIWDVY-TGKLLLNLV--DHTEVVRDLTFAPDGSLILV 187
Query: 78 AAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTV 136
+A D +++++D L N ++ L H V+S ++P S + S V LW +
Sbjct: 188 SASRDKTLRVWD--LKDDGNMMKVLRGHQNWVYSCAFSPD--SSMLCSVGASKAVFLWNM 243
Query: 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD------VREMGSTMIIPA 190
D+ T +R + H + V ++P + + +AS D + IWD + E G P
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYIWDPHNGDILMEFGHLFPPPT 302
Query: 191 HEFEILACD-WNK-----YDDCLIASASVDKSIKIWDV-RNYRVPIAVLNGHGYAVRKVK 243
F A D W + +D +AS + DK ++ W + +Y V +A L+ +G
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAPLS-NGLCCA--- 358
Query: 244 FSPHRRNLLASCSYDMTVCLW 264
FS ++LA+ ++D +V W
Sbjct: 359 FSTDG-SVLAAGTHDGSVYFW 378
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 189 (71.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 58/192 (30%), Positives = 97/192 (50%)
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ + +C ++ D ++ S K++ +W++ Y + I L GH + V FSP
Sbjct: 212 GHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKYTM-IRKLEGHHHDVVACDFSPDGA 269
Query: 250 NLLASCSYDMTVCLWDFMVEDALVGRYDH----HTE-FAVGVD------MSVLVEGL-LA 297
LLA+ SYD V +WD D L+ + H T FA G + +S +GL +A
Sbjct: 270 -LLATASYDTRVYIWDPHNGDILM-EFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 298 STGWDELVYVWQ 309
S D++V W+
Sbjct: 328 SLADDKMVRFWR 339
Score = 180 (68.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 73 DSLLIAA-VADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
D LL+A + +G +KI+D T + +L +HT V + P +++S D T+
Sbjct: 139 DQLLLATGLNNGRIKIWDVY---TGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195
Query: 132 KLWTV-DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
++W + D ++ + H VY+ ++P S + CS + +W++ + +
Sbjct: 196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRN----------YRVPIAVLNG--HGYA 238
H +++ACD++ D L+A+AS D + IWD N + P + G +
Sbjct: 255 HHHDVVACDFSP-DGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRW 313
Query: 239 VRKVKFSPHRRNLLASCSYDMTVCLWDFMVED--ALVGRYDHHTEFAVGVDMSVLVEGLL 296
VR V FS H +AS + D V W + ED V + A D SVL G
Sbjct: 314 VRSVSFS-HDGLHVASLADDKMVRFWR-IDEDYPVQVAPLSNGLCCAFSTDGSVLAAGT- 370
Query: 297 ASTGWDELVYVW 308
D VY W
Sbjct: 371 ----HDGSVYFW 378
Score = 160 (61.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 69/261 (26%), Positives = 121/261 (46%)
Query: 18 FYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLI 77
F + +L +AT N NGR+ + D+ L LV D + V DL ++ +L+
Sbjct: 136 FGQDQLLLATGLN-----NGRIKIWDVY-TGKLLLNLV--DHTEVVRDLTFAPDGSLILV 187
Query: 78 AAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTV 136
+A D +++++D L N ++ L H V+S ++P S + S V LW +
Sbjct: 188 SASRDKTLRVWD--LKDDGNMMKVLRGHQNWVYSCAFSPD--SSMLCSVGASKAVFLWNM 243
Query: 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD------VREMGSTMIIPA 190
D+ T +R + H + V ++P + + +AS D + IWD + E G P
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYIWDPHNGDILMEFGHLFPPPT 302
Query: 191 HEFEILACD-WNK-----YDDCLIASASVDKSIKIWDV-RNYRVPIAVLNGHGYAVRKVK 243
F A D W + +D +AS + DK ++ W + +Y V +A L+ +G
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAPLS-NGLCCA--- 358
Query: 244 FSPHRRNLLASCSYDMTVCLW 264
FS ++LA+ ++D +V W
Sbjct: 359 FSTDG-SVLAAGTHDGSVYFW 378
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 74/278 (26%), Positives = 130/278 (46%)
Query: 45 SPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE 104
+P + V ++ D V D+ + D+ + A +K+++ + N + LH
Sbjct: 331 TPTLAVQQQFVGYN--DDVLDVKFVGKDDTHIAVATNSSQLKVFELS----TNSCQILHG 384
Query: 105 HTREVHSADYNPTRRDS-FITSSWDDTVKLWTVD----RPTSVRTFKEHAYCVYNATWNP 159
HT + S D R+ S F T + D +V++W +D R V H+ V + +
Sbjct: 385 HTDTILSIDV--FRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSR 442
Query: 160 RHSDVFCSASGDCTLRIWDVREM-GS--TMIIPAHEFEIL-ACDWNKY----DDCLIASA 211
S S DCT+++WD+ E G+ M++ A E D N +D L+AS
Sbjct: 443 MKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASG 502
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVED- 270
S D++ K+W + + R+ + V GH V V+FSP + +L S S D +V +W ++D
Sbjct: 503 SQDRTAKLWALSDLRL-LGVCRGHRRGVWSVQFSPVDQ-ILGSASADGSVRIWS--IQDF 558
Query: 271 ALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ + ++ H + + + V L S+G D LV +W
Sbjct: 559 SCLKTFEGHDASVLKI-IFVSRGTQLVSSGSDGLVKLW 595
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/228 (21%), Positives = 102/228 (44%)
Query: 3 VFKTPFNGYSVKFSPFYES-RLAVATAQNFGILGNG-RVHVLDLSPAAPALTELVAFDTA 60
+FK+ + S + PFY+ ++ V+ + G ++++L +S + + +
Sbjct: 7 LFKSNY-AVSSRIEPFYKGGKVQVSGDEQHIFCTYGPKINILQISTGK--IIHSIEQEDQ 63
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
+ + A S D +L++A ++ +D R++H + V S ++ T
Sbjct: 64 EDITAFALSPD-DEMLVSASRALLLRQWDWKQQQCRRSWRAVH--SVPVASMSFDCTST- 119
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV-FCSASGDCTLRIWDV 179
T D T+KLW V + K + V+ ++P S + S+S DC +RIWD+
Sbjct: 120 LLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDL 179
Query: 180 REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV 227
R ++ +H + A ++ L++S DK +WD++ +V
Sbjct: 180 RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGR-DKICSVWDLQEQKV 226
Score = 136 (52.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 48/213 (22%), Positives = 90/213 (42%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVR---------TFKEHAYCVYNA 155
H+ V S + ++ ++ S D TVK+W + T T + H V +
Sbjct: 431 HSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSV 490
Query: 156 TWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDK 215
+P + + S S D T ++W + ++ + H + + ++ D ++ SAS D
Sbjct: 491 CVSP-NDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQ-ILGSASADG 548
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
S++IW ++++ + GH +V K+ F L++S S D V LW + V
Sbjct: 549 SVRIWSIQDFSC-LKTFEGHDASVLKIIFVSRGTQLVSSGS-DGLVKLWTIKTNEC-VRT 605
Query: 276 YDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
D H + + E L+ + D + VW
Sbjct: 606 LDAHQDKVWALHGGCRDE-LMVTGSADSTITVW 637
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 188 (71.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 59/216 (27%), Positives = 102/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 131 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 188
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 189 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 246
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 247 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRIWDVRPFAPKERCVKIF 304
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A D VYVW
Sbjct: 305 QGNVHNFEKNL-LRCSWSPDGSKIAGGSADRFVYVW 339
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 60/201 (29%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 149 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 203
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +V+TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 204 KLWDIRKKAAVQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 261
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYA--VRKVKF 244
+ + L+++A +D +++IWDVR + V I N H + + + +
Sbjct: 262 ADSVTGLSLSSEGSYLLSNA-MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 320
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 321 SPDGSKI-AGGSADRFVYVWD 340
Score = 170 (64.9 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 200 DGTVKLWDIRKKAAVQTF----QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 254
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+RIWDVR I H FE
Sbjct: 255 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRIWDVRPFAPKERCVKIFQGNVHNFEK 313
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA S D+ + +WD + R+ + L GH +V ++ F P +L+
Sbjct: 314 NLLRCSWSP-DGSKIAGGSADRFVYVWDTTSRRI-LYKLPGHAGSVNELAFHPEEPIILS 371
Query: 254 SCS 256
+ S
Sbjct: 372 ASS 374
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/214 (25%), Positives = 95/214 (44%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P ++ ++ +D + LW V + T K H+ V
Sbjct: 85 PIMLLSGHEGEVYCCKFHPWG-NTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 143
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 144 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 201
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + + + Y V V F+ +++ D + +WD ++ L
Sbjct: 202 TVKLWDIRK-KAAVQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 257
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V +W
Sbjct: 258 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRIW 289
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 122 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 176
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +++TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 177 KLWDIRKKAAIQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 234
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYA--VRKVKF 244
+ + L+++A +D ++++WDVR + V I N H + + + +
Sbjct: 235 ADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 294 SPDGSKIAAG-SADRFVYVWD 313
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 104 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 161
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 219
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 220 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCVKIF 277
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VYVW
Sbjct: 278 QGNVHNFEKNL-LRCSWSPDGSKIAAGSADRFVYVW 312
Score = 169 (64.5 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 50/183 (27%), Positives = 89/183 (48%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D I++ ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 173 DGTVKLWDIRKKAA---IQTF-QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 227
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+R+WDVR I H FE
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 286
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA+ S D+ + +WD + R+ + L GH ++ +V F P +++
Sbjct: 287 NLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIIIS 344
Query: 254 SCS 256
+ S
Sbjct: 345 ASS 347
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + ++ +D + LW V + T K H+ V
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 117 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + I + Y V V F+ +++ D + +WD ++ L
Sbjct: 175 TVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 230
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V VW
Sbjct: 231 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVW 262
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 123 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 177
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +++TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 178 KLWDIRKKAAIQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYA--VRKVKF 244
+ + L+++A +D ++++WDVR + V I N H + + + +
Sbjct: 236 ADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 295 SPDGSKIAAG-SADRFVYVWD 314
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 162
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 220
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 221 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCVKIF 278
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VYVW
Sbjct: 279 QGNVHNFEKNL-LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 51/183 (27%), Positives = 89/183 (48%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D I++ ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 174 DGTVKLWDIRKKAA---IQTF-QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 228
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+R+WDVR I H FE
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 287
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA+ S D+ + +WD + R+ + L GH ++ +V F P +L+
Sbjct: 288 NLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILS 345
Query: 254 SCS 256
+ S
Sbjct: 346 ASS 348
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + ++ +D + LW V + T K H+ V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 118 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + I + Y V V F+ +++ D + +WD ++ L
Sbjct: 176 TVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 231
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V VW
Sbjct: 232 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVW 263
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 123 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 177
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +++TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 178 KLWDIRKKAAIQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYA--VRKVKF 244
+ + L+++A +D ++++WDVR + V I N H + + + +
Sbjct: 236 ADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 295 SPDGSKIAAG-SADRFVYVWD 314
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 162
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 220
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 221 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCVKIF 278
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VYVW
Sbjct: 279 QGNVHNFEKNL-LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 51/183 (27%), Positives = 89/183 (48%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D I++ ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 174 DGTVKLWDIRKKAA---IQTF-QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 228
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+R+WDVR I H FE
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 287
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA+ S D+ + +WD + R+ + L GH ++ +V F P +L+
Sbjct: 288 NLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILS 345
Query: 254 SCS 256
+ S
Sbjct: 346 ASS 348
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + ++ +D + LW V + T K H+ V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 118 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + I + Y V V F+ +++ D + +WD ++ L
Sbjct: 176 TVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 231
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V VW
Sbjct: 232 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVW 263
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 105 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 162
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 220
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 221 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCVRIF 278
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VYVW
Sbjct: 279 QGNVHNFEKNL-LRCSWSPDGSKIAAGSADRFVYVW 313
Score = 186 (70.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 56/201 (27%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 123 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 177
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +++TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 178 KLWDIRKKAAIQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 235
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP---IAVLNG--HGYA--VRKVKF 244
+ + L+++A +D ++++WDVR + + + G H + + + +
Sbjct: 236 ADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW 294
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 295 SPDGSKIAAG-SADRFVYVWD 314
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 51/183 (27%), Positives = 89/183 (48%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D I++ ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 174 DGTVKLWDIRKKAA---IQTF-QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 228
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+R+WDVR I H FE
Sbjct: 229 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVRIFQGNVHNFEK 287
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+L C W+ D IA+ S D+ + +WD + R+ + L GH ++ +V F P +L+
Sbjct: 288 NLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILS 345
Query: 254 SCS 256
+ S
Sbjct: 346 ASS 348
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + ++ +D + LW V + T K H+ V
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 117
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 118 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + I + Y V V F+ +++ D + +WD ++ L
Sbjct: 176 TVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 231
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V VW
Sbjct: 232 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVW 263
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 67/266 (25%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +++ + D ++KI+D + R L HT V Y+
Sbjct: 220 ENSKGVYCLQYD---DDKIVSGLRDNTIKIWDRK---DYSCSRILSGHTGSVLCLQYD-- 271
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
I+ S D TV++W V+ ++T H V + + + + + S D ++ +W
Sbjct: 272 -NRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA---NGIMVTCSKDRSIAVW 327
Query: 178 DV---REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ R++ ++ H + D +DD I SAS D++IK+W + + L G
Sbjct: 328 DMVSPRDITIRRVLVGHRAAVNVVD---FDDRYIVSASGDRTIKVWSMDTLEF-VRTLAG 383
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY-DHHTEFAVGVDMSVLVE 293
H + +++ R L+ S S D T+ LWD + + R + H E + E
Sbjct: 384 HRRGIACLQY---RGRLVVSGSSDNTIRLWD--IHSGVCLRVLEGHEELVRCIRFD---E 435
Query: 294 GLLASTGWDELVYVW--QQGMDPRAV 317
+ S +D + VW Q +DPRA+
Sbjct: 436 KRIVSGAYDGKIKVWDLQAALDPRAL 461
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
+ +++ D S+ ++D P R L H V+ D++ D +I S S D T+
Sbjct: 312 NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFD----DRYIVSASGDRTI 367
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
K+W++D VRT H + + R + S S D T+R+WD+ ++ H
Sbjct: 368 KVWSMDTLEFVRTLAGHRRGIACLQYRGR---LVVSGSSDNTIRLWDIHSGVCLRVLEGH 424
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV--------LNGHGYAVRKVK 243
E E++ C ++D+ I S + D IK+WD++ P A+ L H V +++
Sbjct: 425 E-ELVRCI--RFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 244 FSPHRRNLLASCSYDMTVCLWDFM 267
F + + S S+D T+ +WDF+
Sbjct: 482 FDDFQ---IVSSSHDDTILIWDFL 502
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 192 (72.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 67/266 (25%), Positives = 120/266 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +++ + D ++KI+D + R L HT V Y+
Sbjct: 220 ENSKGVYCLQYD---DDKIVSGLRDNTIKIWDRK---DYSCSRILSGHTGSVLCLQYD-- 271
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
I+ S D TV++W V+ ++T H V + + + + + S D ++ +W
Sbjct: 272 -NRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA---NGIMVTCSKDRSIAVW 327
Query: 178 DV---REMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ R++ ++ H + D +DD I SAS D++IK+W + + L G
Sbjct: 328 DMVSPRDITIRRVLVGHRAAVNVVD---FDDRYIVSASGDRTIKVWSMDTLEF-VRTLAG 383
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY-DHHTEFAVGVDMSVLVE 293
H + +++ R L+ S S D T+ LWD + + R + H E + E
Sbjct: 384 HRRGIACLQY---RGRLVVSGSSDNTIRLWD--IHSGVCLRVLEGHEELVRCIRFD---E 435
Query: 294 GLLASTGWDELVYVW--QQGMDPRAV 317
+ S +D + VW Q +DPRA+
Sbjct: 436 KRIVSGAYDGKIKVWDLQAALDPRAL 461
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
+ +++ D S+ ++D P R L H V+ D++ D +I S S D T+
Sbjct: 312 NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFD----DRYIVSASGDRTI 367
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
K+W++D VRT H + + R + S S D T+R+WD+ ++ H
Sbjct: 368 KVWSMDTLEFVRTLAGHRRGIACLQYRGR---LVVSGSSDNTIRLWDIHSGVCLRVLEGH 424
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAV--------LNGHGYAVRKVK 243
E E++ C ++D+ I S + D IK+WD++ P A+ L H V +++
Sbjct: 425 E-ELVRCI--RFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 244 FSPHRRNLLASCSYDMTVCLWDFM 267
F + + S S+D T+ +WDF+
Sbjct: 482 FDDFQ---IVSSSHDDTILIWDFL 502
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 151 (58.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 54/176 (30%), Positives = 78/176 (44%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T + T H + + W+ ++ CSAS D T+++WDV E GS ++ C
Sbjct: 248 TPIVTLSGHKEAISSVLWSD--AEEICSASWDHTIKVWDV-ESGSLKSTLTGN-KVFNCI 303
Query: 200 WNKYDD-CL-IASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKVKFSPHRRNLLASC 255
Y C +AS S D+ I++WD R + L+ H V VK+SP L S
Sbjct: 304 --SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISG 361
Query: 256 SYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
S D V LWD YD H + + VD + GLL S G D +Y ++
Sbjct: 362 SLDNMVKLWD--TRSCKAPLYDLAAHEDKVLSVDWTD--SGLLLSGGADNKLYSYR 413
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/155 (24%), Positives = 75/155 (48%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T PI +L H + S ++ + ++SWD T+K+W V+ + T + V+N
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDA--EEICSASWDHTIKVWDVESGSLKSTLTGNK--VFN 301
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMI---IPAHEFEILACDWNKYDDCLIAS 210
+++P + S S D +R+WD R +++ + +H + + W+ + + S
Sbjct: 302 CISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLIS 360
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
S+D +K+WD R+ + P+ L H V V ++
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Score = 81 (33.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 61 DGVYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHSADYN 115
D V D+AW +S LL++A D ++ +++ + N +++LH H V S +
Sbjct: 141 DVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVE--RNKVKALHCCRGHAGSVDSIAVD 198
Query: 116 PTRRDSFITSSWDDTVKLWT 135
T F + SWD +K+W+
Sbjct: 199 STGT-KFCSGSWDKMLKIWS 217
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 154 (59.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 56/176 (31%), Positives = 78/176 (44%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T + T H V + W+ ++ CSAS D T+R+WDV E GS ++ C
Sbjct: 248 TPIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDV-ESGSLKSTLTGN-KVFNCI 303
Query: 200 WNKYDD-CL-IASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKVKFSPHRRNLLASC 255
Y C +AS S D+ I++WD R + L+ H V VK+SP L S
Sbjct: 304 --SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISG 361
Query: 256 SYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
S D V LWD YD H + + VD + GLL S G D +Y ++
Sbjct: 362 SLDNIVKLWD--TRSCKAPLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLYSYR 413
Score = 145 (56.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 38/155 (24%), Positives = 75/155 (48%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T PI +L H V S ++ + ++SWD T+++W V+ + T + V+N
Sbjct: 246 TRTPIVTLSGHMEAVSSVLWSDA--EEICSASWDHTIRVWDVESGSLKSTLTGNK--VFN 301
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMI---IPAHEFEILACDWNKYDDCLIAS 210
+++P + S S D +R+WD R +++ + +H + + W+ + + S
Sbjct: 302 CISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLIS 360
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
S+D +K+WD R+ + P+ L H V V ++
Sbjct: 361 GSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Score = 77 (32.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 61 DGVYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHS--AD 113
D V D+AW +S LL++A D ++ +++ + N +++LH H V S D
Sbjct: 141 DVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVE--RNKVKALHCCRGHAGSVDSIAVD 198
Query: 114 YNPTRRDSFITSSWDDTVKLWT 135
+ T+ F + SWD +K+W+
Sbjct: 199 GSGTK---FCSGSWDKMLKIWS 217
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 188 (71.2 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 43/136 (31%), Positives = 73/136 (53%)
Query: 131 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIP 189
+K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++
Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLR 211
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H+ + +C ++ D ++ S K++ +W++ Y + I L GH + V FSP
Sbjct: 212 GHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKYTM-IRKLEGHHHDVVACDFSPDGA 269
Query: 250 NLLASCSYDMTVCLWD 265
LLA+ SYD V +WD
Sbjct: 270 -LLATASYDTRVYIWD 284
Score = 160 (61.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 69/261 (26%), Positives = 121/261 (46%)
Query: 18 FYESRLAVATAQNFGILGNGRVHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLI 77
F + +L +AT N NGR+ + D+ L LV D + V DL ++ +L+
Sbjct: 136 FGQDQLLLATGLN-----NGRIKIWDVY-TGKLLLNLV--DHTEVVRDLTFAPDGSLILV 187
Query: 78 AAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTV 136
+A D +++++D L N ++ L H V+S ++P S + S V LW +
Sbjct: 188 SASRDKTLRVWD--LKDDGNMMKVLRGHQNWVYSCAFSPD--SSMLCSVGASKAVFLWNM 243
Query: 137 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD------VREMGSTMIIPA 190
D+ T +R + H + V ++P + + +AS D + IWD + E G P
Sbjct: 244 DKYTMIRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYIWDPHTGAILMEFGHLFPPPT 302
Query: 191 HEFEILACD-WNK-----YDDCLIASASVDKSIKIWDV-RNYRVPIAVLNGHGYAVRKVK 243
F A D W + +D +AS + DK ++ W + +Y V +A L+ +G
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAPLS-NGLCCA--- 358
Query: 244 FSPHRRNLLASCSYDMTVCLW 264
FS ++LA+ ++D +V W
Sbjct: 359 FSTDG-SVLAAGTHDGSVYFW 378
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 77/278 (27%), Positives = 124/278 (44%)
Query: 44 LSPAAPALTEL------VAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTAN 97
L+PAAP + VAF DG Y AWS+ H ++ + + +K + L T N
Sbjct: 23 LAPAAPFDKKCGRENWTVAF-APDGSY-FAWSQGHRTVKLVPWSQ-CLKNF--LLHGTKN 77
Query: 98 PIRSLHEH-TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNAT 156
S +R+ R+ I D V W++ +SV ++ + CV N
Sbjct: 78 ITNSSSLRLSRQNSDGGQKNKPREHIIDCG--DIV--WSLAFGSSVP--EKQSRCV-NIE 130
Query: 157 WNPRH--SDVFCSASG--DCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLI-ASA 211
W+ D A+G + ++IWDV G ++ E++ D LI SA
Sbjct: 131 WHRFRFGQDQLLLATGLNNGRIKIWDVYT-GKLLLNLVDHTEVVRDLTFAPDGSLILVSA 189
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
S DK++++WD+++ + VL GH V FSP ++L S V LW+ M +
Sbjct: 190 SRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDS-SMLCSVGASKAVFLWN-MDKYT 247
Query: 272 LVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
++ + + H V D S +G LLA+ +D VY+W
Sbjct: 248 MIRKLEGHHHDVVACDFSP--DGALLATASYDTRVYIW 283
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 193 (73.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 58/234 (24%), Positives = 108/234 (46%)
Query: 34 LGNGRVHVLDLSPAAPALTELVA-FDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTAL 92
L NG VH+++ ++V F+ D A + + ++ D +++++
Sbjct: 34 LYNGHVHIMNYENQ-----QMVKDFEVCDVPVRSARFVARKNWILTGSDDMQIRVFNYN- 87
Query: 93 PPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSV-RTFKEHAYC 151
T + S H+ + +PT+ +TSS D +KLW ++ + R F+ H +
Sbjct: 88 --TLEKVHSFEAHSDYLRCIAVHPTQ-PLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHY 144
Query: 152 VYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW-NKYDDCLIAS 210
V +NP+ ++ F SAS D T+++W + + + HE + D+ + D + S
Sbjct: 145 VMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLIS 204
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 264
+ D+ +KIWD +N + + L GH + V F P +L S D TV +W
Sbjct: 205 GADDRLVKIWDYQN-KTCVQTLEGHAQNISAVCFHPELPIVLTG-SEDGTVRIW 256
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 190 (71.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 57/196 (29%), Positives = 97/196 (49%)
Query: 71 SHDSLLIAAVADGSVKIYDTALPPTANPIRSLHE-HTREVHSADYNPTRRDSFITSSWDD 129
S S L++ D S++ +D L N + L++ H V D +P F ++S D
Sbjct: 352 SDSSGLLSCSEDMSIRYWD--LRSFTNTV--LYQGHAYPVWDLDISPCSL-YFASASHDR 406
Query: 130 TVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
T +LW+ DR +R + H V ++P +S+ + S D T+R+W ++ S +
Sbjct: 407 TARLWSFDRTYPLRIYAGHLLDVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFT 465
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRR 249
H +LA ++ L ASA D+ +K+WD+ + + L GH + + FSP
Sbjct: 466 GHRGPVLALAFSPNGKYL-ASAGEDQRLKLWDLASGTL-YKELRGHTDNITSLTFSPDS- 522
Query: 250 NLLASCSYDMTVCLWD 265
+L+AS S D +V +WD
Sbjct: 523 SLIASASMDNSVRVWD 538
Score = 170 (64.9 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 54/210 (25%), Positives = 93/210 (44%)
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWN 158
++ L H V+S + + ++ S D +++ W + T+ ++ HAY V++ +
Sbjct: 335 MKILRGHCGPVYSTRFL-SDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDIS 393
Query: 159 PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIK 218
P S F SAS D T R+W I H ++ ++ + L A+ S DK+++
Sbjct: 394 PC-SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYL-ATGSTDKTVR 451
Query: 219 IWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278
+W + + + GH V + FSP+ + LAS D + LWD + L
Sbjct: 452 LWSTQQGN-SVRLFTGHRGPVLALAFSPNGK-YLASAGEDQRLKLWD-LASGTLYKELRG 508
Query: 279 HTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
HT+ + S L+AS D V VW
Sbjct: 509 HTDNITSLTFSP-DSSLIASASMDNSVRVW 537
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
P+R H +V ++P + T S D TV+LW+ + SVR F H V +
Sbjct: 418 PLRIYAGHLLDVDCVKFHPNS-NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAF 476
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSI 217
+P + SA D L++WD+ + H I + ++ D LIASAS+D S+
Sbjct: 477 SP-NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSLIASASMDNSV 534
Query: 218 KIWDVRN 224
++WD+RN
Sbjct: 535 RVWDIRN 541
Score = 151 (58.2 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 49/170 (28%), Positives = 81/170 (47%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T ++ + H VY+ + S + S S D ++R WD+R +T++ H + + D
Sbjct: 333 TEMKILRGHCGPVYSTRFLSDSSGLL-SCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLD 391
Query: 200 WNKYDDCLIASASVDKSIKIWDV-RNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYD 258
+ ASAS D++ ++W R Y P+ + GH V VKF P+ N LA+ S D
Sbjct: 392 ISPCS-LYFASASHDRTARLWSFDRTY--PLRIYAGHLLDVDCVKFHPNS-NYLATGSTD 447
Query: 259 MTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
TV LW ++ V + H + + S + LAS G D+ + +W
Sbjct: 448 KTVRLWSTQQGNS-VRLFTGHRGPVLALAFSPNGK-YLASAGEDQRLKLW 495
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 189 (71.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 70/264 (26%), Positives = 120/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + + ++ L HT V Y+
Sbjct: 189 ENSKGVYCLQYD---DDKIISGLRDNSIKIWDKS---SLECLKVLTGHTGSVLCLQYDER 242
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 243 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 296
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 297 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 352
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 353 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 408
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 409 SG--AYDGKIK-VWDLQAALDPRA 429
Score = 187 (70.9 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 253 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 306
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 307 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 362
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 363 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 415
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 416 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 471
Score = 124 (48.7 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 324 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 376
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 377 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 433
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 434 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 479
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 155 (59.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 54/176 (30%), Positives = 78/176 (44%)
Query: 140 TSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACD 199
T + T H + + W+ +D CSAS D T+R+WDV G + ++ + C
Sbjct: 248 TPLVTLSGHTEAISSVLWSD--ADEVCSASWDHTVRVWDVESGGLKSTLTGNK--VFNCI 303
Query: 200 WNKYDD-CL-IASASVDKSIKIWDVRNYRVPIAVLN--GHGYAVRKVKFSPHRRNLLASC 255
Y C +AS S D+ I++WD R + L+ H V VK+SP L S
Sbjct: 304 --SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISG 361
Query: 256 SYDMTVCLWDFMVEDALVGRYD--HHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
S D V LWD YD H + + VD + GLL S G D +Y ++
Sbjct: 362 SLDNMVKLWD--TRSCKAPLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLYSYR 413
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/155 (25%), Positives = 75/155 (48%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
T P+ +L HT + S ++ D ++SWD TV++W V+ T + V+N
Sbjct: 246 TRTPLVTLSGHTEAISSVLWSDA--DEVCSASWDHTVRVWDVESGGLKSTLTGNK--VFN 301
Query: 155 A-TWNPRHSDVFCSASGDCTLRIWDVREMGSTMI---IPAHEFEILACDWNKYDDCLIAS 210
+++P + S S D +R+WD R +++ + +H + + W+ D + S
Sbjct: 302 CISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLIS 360
Query: 211 ASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFS 245
S+D +K+WD R+ + P+ L H V V ++
Sbjct: 361 GSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 395
Score = 75 (31.5 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 61 DGVYDLAW--SESHDSLLIAAVADGSVKIYDTALPPTANPIRSLH---EHTREVHS--AD 113
D V D+AW +S LL+ A D ++ +++ + N +++LH H V + D
Sbjct: 141 DVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIE--RNKVKALHCCRGHAGSVDAIAVD 198
Query: 114 YNPTRRDSFITSSWDDTVKLWT 135
+ T+ F + SWD +K+W+
Sbjct: 199 SSGTK---FCSGSWDKMLKIWS 217
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 187 (70.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFI--TSSWDDTV 131
S+L +A D +V ++D+ T ++ L HT V+S Y P RR + T S D TV
Sbjct: 122 SMLFSASTDKTVAVWDSE---TGERVKRLKGHTSFVNSC-Y-PARRGPQLVCTGSDDGTV 176
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAH 191
KLW + + +++TF ++ Y V T+N SD S D +++WD+R+ T + H
Sbjct: 177 KLWDIRKKAAIQTF-QNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGH 234
Query: 192 EFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR-----VPIAVLNGHGYA--VRKVKF 244
+ + L+++A +D ++++WDVR + V I N H + + + +
Sbjct: 235 ADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 245 SPHRRNLLASCSYDMTVCLWD 265
SP + A S D V +WD
Sbjct: 294 SPDGSKIAAG-SADRFVYVWD 313
Score = 187 (70.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+L H+ V YN T ++S D TV +W + V+ K H V N+ + R
Sbjct: 104 TLKGHSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFV-NSCYPAR 161
Query: 161 HS-DVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ C+ S D T+++WD+R+ + + +++LA +N D +I S +D IK+
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKV 219
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRY 276
WD+R ++ + GH +V + S LL++ + D TV +WD F ++ V +
Sbjct: 220 WDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSN-AMDNTVRVWDVRPFAPKERCVKIF 277
Query: 277 D---HHTEFAVGVDMSVLVEGL-LASTGWDELVYVW 308
H+ E + + S +G +A+ D VYVW
Sbjct: 278 QGNVHNFEKNL-LRCSWSPDGSKIAAGSADRFVYVW 312
Score = 166 (63.5 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 49/173 (28%), Positives = 84/173 (48%)
Query: 82 DGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS 141
DG+VK++D I++ ++T +V + +N T D I+ D+ +K+W + +
Sbjct: 173 DGTVKLWDIRKKAA---IQTF-QNTYQVLAVTFNDTS-DQIISGGIDNDIKVWDLRQNKL 227
Query: 142 VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS----TMIIPA--HEFE- 194
T + HA V + + S + +A D T+R+WDVR I H FE
Sbjct: 228 TYTMRGHADSVTGLSLSSEGSYLLSNAM-DNTVRVWDVRPFAPKERCVKIFQGNVHNFEK 286
Query: 195 -ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP 246
+L C W+ D IA+ S D+ + +WD + R+ + L GH ++ +V F P
Sbjct: 287 NLLRCSWSP-DGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHP 337
Score = 158 (60.7 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 98 PIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPT-SVRTFKEHAYCVYNAT 156
PI L H EV+ ++P + ++ +D + LW V + T K H+ V
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 157 WNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDK 215
+N S +F SAS D T+ +WD E G + + H + +C + L+ + S D
Sbjct: 117 YNTDGSMLF-SASTDKTVAVWD-SETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 216 SIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR 275
++K+WD+R + I + Y V V F+ +++ D + +WD ++ L
Sbjct: 175 TVKLWDIRK-KAAIQTFQ-NTYQVLAVTFNDTSDQIISG-GIDNDIKVWDLR-QNKLTYT 230
Query: 276 YDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
H + G+ +S EG L S D V VW
Sbjct: 231 MRGHADSVTGLSLSS--EGSYLLSNAMDNTVRVW 262
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 187 (70.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 74/268 (27%), Positives = 119/268 (44%)
Query: 61 DGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRD 120
D V D+A+ ++ LL + AD S+K++D + I+++H H V S + P D
Sbjct: 151 DSVQDVAF-DAQGKLLASCSADLSIKLWD--FQQSYECIKTMHGHDHNVSSVAFVPAG-D 206
Query: 121 SFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV-----------YNATWNPRHSDVFCSAS 169
+++S D T+K+W V V+T+ H V + N + V+ + S
Sbjct: 207 YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNS 266
Query: 170 GDCTLRIWDVREMGSTMIIPAHEF------EILACDWNK--YDDCLIASASVDKSIKIWD 221
DC + + D E I A E E D K + +AS S DK+I+IWD
Sbjct: 267 KDCKVELRD-HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWD 325
Query: 222 VRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE 281
V + + + L+GH VR + F P + L+ S S D T+ +WD + + Y H
Sbjct: 326 V-SVGLCLLTLSGHDNWVRGLAFHPGGKYLV-SASDDKTIRVWDLRNKRCMKTLYAHQ-H 382
Query: 282 FAVGVDMSVLVEGLLASTGWDELVYVWQ 309
F +D + S D+ V VW+
Sbjct: 383 FCTSIDFHK-AHPYVISGSVDQTVKVWE 409
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/176 (28%), Positives = 79/176 (44%)
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEF 193
W + RP + H + ++P + + SAS D T+RIWD + H
Sbjct: 94 W-IPRPPEKFSLTGHRASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLKGHTD 151
Query: 194 EILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLA 253
+ ++ L+AS S D SIK+WD + I ++GH + V V F P +L
Sbjct: 152 SVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL- 209
Query: 254 SCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
S S D T+ +W+ + V Y H E+ V V +EG + A+ D+ + VW
Sbjct: 210 SASRDRTIKMWE-VATGYCVKTYTGHREWVRMV--RVHIEGSIFATCSNDQTIRVW 262
Score = 150 (57.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 45/183 (24%), Positives = 87/183 (47%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
SL H + ++P +++S D T+++W + R+ K H V + ++ +
Sbjct: 103 SLTGHRASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQ 161
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
+ S S D ++++WD ++ + + H+ + + + D ++ SAS D++IK+
Sbjct: 162 -GKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKM 219
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPH-RRNLLASCSYDMTVCLWDFMVEDALVGRYDH 278
W+V + GH VR V+ H ++ A+CS D T+ +W +D V DH
Sbjct: 220 WEVATGYC-VKTYTGHREWVRMVRV--HIEGSIFATCSNDQTIRVWLTNSKDCKVELRDH 276
Query: 279 -HT 280
HT
Sbjct: 277 EHT 279
Score = 131 (51.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 122 FITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR 180
F+ S S D T+++W V + T H V ++P SAS D T+R+WD+R
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPG-GKYLVSASDDKTIRVWDLR 369
Query: 181 EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
+ AH+ + D++K +I S SVD+++K+W+ R
Sbjct: 370 NKRCMKTLYAHQHFCTSIDFHKAHPYVI-SGSVDQTVKVWECR 411
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 58/255 (22%), Positives = 109/255 (42%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
+L+++A D +++I+D T RSL HT V ++ + + S D ++KL
Sbjct: 121 ALMVSASEDATIRIWDFE---TGEYERSLKGHTDSVQDVAFDAQGK-LLASCSADLSIKL 176
Query: 134 WTVDRPTS-VRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHE 192
W + ++T H + V + + P D SAS D T+++W+V H
Sbjct: 177 WDFQQSYECIKTMHGHDHNVSSVAFVPA-GDYVLSASRDRTIKMWEVATGYCVKTYTGHR 235
Query: 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSP------ 246
E + + + A+ S D++I++W + N + L H + V + ++P
Sbjct: 236 -EWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASA 293
Query: 247 -------------HRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVE 293
H+ LAS S D T+ +WD V L+ H + G+ +
Sbjct: 294 INEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLL-TLSGHDNWVRGLAFHPGGK 352
Query: 294 GLLASTGWDELVYVW 308
L++++ D+ + VW
Sbjct: 353 YLVSASD-DKTIRVW 366
>UNIPROTKB|Q96S15 [details] [associations]
symbol:WDR24 "WD repeat-containing protein 24" species:9606
"Homo sapiens" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471112
GO:GO:0016558 EMBL:AE006464 EMBL:Z92544 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 OMA:HALYDSR OrthoDB:EOG48WC1D EMBL:AL136863
EMBL:BC008025 EMBL:BC009761 IPI:IPI00031042 IPI:IPI00045472
RefSeq:NP_115635.1 UniGene:Hs.459632 ProteinModelPortal:Q96S15
SMR:Q96S15 IntAct:Q96S15 MINT:MINT-1444376 STRING:Q96S15
PhosphoSite:Q96S15 DMDM:74762692 PaxDb:Q96S15 PRIDE:Q96S15
DNASU:84219 Ensembl:ENST00000248142 Ensembl:ENST00000293883
GeneID:84219 KEGG:hsa:84219 UCSC:uc002ciz.1 GeneCards:GC16M000734
HGNC:HGNC:20852 HPA:HPA039506 neXtProt:NX_Q96S15
PharmGKB:PA134918496 InParanoid:Q96S15 PhylomeDB:Q96S15
GenomeRNAi:84219 NextBio:73642 Bgee:Q96S15 CleanEx:HS_WDR24
Genevestigator:Q96S15 GermOnline:ENSG00000127580 Uniprot:Q96S15
Length = 920
Score = 143 (55.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 165 FCSASGDCTLRIWDVREMGST-MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVR 223
F S + +++WD+R + AH + CDW+ D +A+ DK +K+WD+
Sbjct: 309 FASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMT 368
Query: 224 NYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSY--DMTVCLWDFMVEDALVGRYDHHTE 281
+R +V +VK+ P R+ LA+CS D + +WD ++ H +
Sbjct: 369 THRAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRD 428
Query: 282 FAVGV 286
G+
Sbjct: 429 VTTGI 433
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 42/155 (27%), Positives = 68/155 (43%)
Query: 119 RDSF-ITSSWDD-TVKLWTVDRPTSV-RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLR 175
RD F S++++ V+LW + RP R F H V+ W+P + D ++
Sbjct: 304 RDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVK 363
Query: 176 IWDV-----REMGSTMIIPAHEFEILACDWNKYDDCLIASAS--VDKSIKIWDVRNYRVP 228
+WD+ +EM I + + W +A+ S VD +I +WDVR VP
Sbjct: 364 VWDMTTHRAKEMHCVQTIAS----VARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVP 419
Query: 229 IAVLNGHGYAVRKVKFS-PHRRNLLASCSYDMTVC 262
A+ H + + PH + L S S D ++C
Sbjct: 420 AAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSSLC 454
Score = 98 (39.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 65 DLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFIT 124
D+ W + ++LL A +G V ++ P + EH R V+ ++PT ++
Sbjct: 141 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 200
Query: 125 SSWDDTVKLWTVDRPTSVRTFKEHA 149
S D +K + + R SV TF A
Sbjct: 201 GSQDGFMKCFDLRRKDSVSTFSGEA 225
Score = 71 (30.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 39/157 (24%), Positives = 60/157 (38%)
Query: 160 RHSDVFCSASGDCTL---RIWDVREMGSTMIIPAHEFEILACDWN-KYDDCLIASASVDK 215
R D + SG+ T R W + G I+P IL + + A ++ +
Sbjct: 213 RRKDSVSTFSGEATEAGPREWAMA--GCVPILPVLSCRILRLHHSFAHGPMQDAESTAND 270
Query: 216 SIKIWDVRNYRVPIAVLNG----HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDA 271
+ + W Y P+ + +G +VR V+FS AS + V LWD D
Sbjct: 271 ARESWGCPLY--PLGLCSGPQAGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDR 328
Query: 272 LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
+ H D G LA+ G D++V VW
Sbjct: 329 CERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVW 365
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 189 (71.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 70/264 (26%), Positives = 120/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + + ++ L HT V Y+
Sbjct: 223 ENSKGVYCLQYD---DDKIISGLRDNSIKIWDKS---SLECLKVLTGHTGSVLCLQYDER 276
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 277 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 330
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 331 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 386
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 387 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 442
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 443 SG--AYDGKIK-VWDLQAALDPRA 463
Score = 187 (70.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 287 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 340
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 341 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 396
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 397 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 449
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 450 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 505
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 358 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 410
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 467
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 468 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 513
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 188 (71.2 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 63 VYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSF 122
V LAW++ ++L +A AD VK++D A T ++ HT+EV + +N +
Sbjct: 236 VLGLAWNKEFRNILASASADKKVKVWDVA---TGTCKITMEHHTKEVQAVAWNHYAPEVL 292
Query: 123 ITSSWDDTVKLWTVDRPTSVRTFKEHAYC-VYNATWNPRHSDVFCSASGDCTLRIWDVR- 180
++ S+D TV L +P S FK V + W+P F + D T++ +DVR
Sbjct: 293 LSGSFDQTVVLKDGRQP-SHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 181 ------EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP-IAVLN 233
E + I H+ + +N L+A+ S D+++K+WD+ N IA N
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHN 411
Query: 234 GHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 276
+ + + FSP LLA + LWD + + + RY
Sbjct: 412 PNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDTLSDTNVSSRY 454
Score = 160 (61.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 48/167 (28%), Positives = 75/167 (44%)
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDV 164
HTR V +N R+ ++S D VK+W V T T + H V WN +V
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 165 FCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRN 224
S S D T+ + D R+ + + ++ + W+ + + + D ++K +DVR
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 225 YRV------PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+ P +NGH A V ++ NLLA+ S D TV LWD
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWD 398
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 49/211 (23%), Positives = 84/211 (39%)
Query: 112 ADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKE--HAYCVYNATWNPRHSDVFCSAS 169
+D PT + + +W D + + +K+ H V WN ++ SAS
Sbjct: 195 SDGTPTI-EIWDLDAWFDMLPCVQLGGQNKEGNYKQGSHTRSVLGLAWNKEFRNILASAS 253
Query: 170 GDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPI 229
D +++WDV + + H E+ A WN Y ++ S S D+++ + D R P
Sbjct: 254 ADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQ---PS 310
Query: 230 AVLNGHGYAV----RKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH------- 278
+G ++V + + PH + D TV +D V A + +
Sbjct: 311 H--SGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFD--VRQASISASESNPSFTIN 366
Query: 279 -HTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
H E A V ++ LLA+ D V +W
Sbjct: 367 GHDEAATSVSYNISAPNLLATGSKDRTVKLW 397
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 189 (71.6 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 70/264 (26%), Positives = 120/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + + ++ L HT V Y+
Sbjct: 238 ENSKGVYCLQYD---DDKIISGLRDNSIKIWDKS---SLECLKVLTGHTGSVLCLQYDER 291
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 292 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 345
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 401
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 402 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 457
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 458 SG--AYDGKIK-VWDLQAALDPRA 478
Score = 187 (70.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 302 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 355
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 356 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 411
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 412 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 464
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 465 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 520
Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 373 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 425
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 482
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 483 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 528
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 190 (71.9 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 57/214 (26%), Positives = 96/214 (44%)
Query: 95 TANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYN 154
TA ++ + H+ V S + T D V +W+V++P V + H + +
Sbjct: 9 TAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIES 68
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
+ + ++ + S ++R+WD+ + H+ I + D++ Y +AS S+D
Sbjct: 69 LQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-FVASGSLD 126
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVG 274
IK+WDVR + I H AVR ++FSP + LAS + D TV LWD +
Sbjct: 127 TDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGK-WLASAADDHTVKLWDLTAGKVMFE 184
Query: 275 RYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
H+ V V+ +E LLAS + W
Sbjct: 185 FTGHYGPVNV-VEFHPSIEYLLASGSSSMTIRFW 217
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 50/195 (25%), Positives = 90/195 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
+ L++A GS++++D A +R+L H + S D++P SF+ S S D +
Sbjct: 75 EELIVAGSQSGSIRVWDLE---AAKILRTLLGHKANICSLDFHPY--GSFVASGSLDTDI 129
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMI-IPA 190
KLW V R + +K H V ++P SA+ D T+++WD+ G M
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTA-GKVMFEFTG 187
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + +++ + L+AS S +I+ WD+ + V ++ + VR + F+P
Sbjct: 188 HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHV-VSCIEEEATPVRCILFNPDGCC 246
Query: 251 LLASCSYDMTVCLWD 265
L + V W+
Sbjct: 247 LYGGFQDSLRVYGWE 261
>DICTYBASE|DDB_G0274279 [details] [associations]
symbol:tssc1 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0274279 GO:GO:0045335 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000151_GR EMBL:AAFI02000012 eggNOG:NOG314403
RefSeq:XP_643981.1 ProteinModelPortal:Q86A97 STRING:Q86A97
PRIDE:Q86A97 EnsemblProtists:DDB0234267 GeneID:8619407
KEGG:ddi:DDB_G0274279 OMA:RINESMD ProtClustDB:CLSZ2729203
Uniprot:Q86A97
Length = 400
Score = 186 (70.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 102 LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWT-VD---RPTSVRTFKEHAYCVYNATW 157
L HT + +P+ ++FI S D ++LW+ +D PT ++ F + +
Sbjct: 136 LKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVIKQFGNLSKLSVGSI- 194
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKYDDCLIASASVDKS 216
NP S+ +A+ D ++ WD R T + AH +I D+N + SA D
Sbjct: 195 NPNISNQLATAN-DVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCK 253
Query: 217 IKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+KIWD R R P+ + +GH + + KF+ + L+ + S D TV LW+
Sbjct: 254 LKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKLWN 302
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 115 NPTRRDSFITSSWDDTVKLWTVDRPTSVRTF---KEHAYCVYNATWNPRHSDVFCSASGD 171
NP + T++ D +K W D + TF K H+ + + +NP SA D
Sbjct: 195 NPNISNQLATAN-DVNIKGW--DFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDD 251
Query: 172 CTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV 222
C L+IWD R+ + I H I + +N+Y D LI ++S D ++K+W++
Sbjct: 252 CKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKLWNL 303
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 189 (71.6 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 49/193 (25%), Positives = 91/193 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S+L+ D +++++D + + +LH H V ++ T + ++ +D TVK+
Sbjct: 349 SILVTGSRDTTLRVWDVE---SGRHLATLHGHHAAVRCVQFDGT---TVVSGGYDFTVKI 402
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD-VREMGSTMIIPAHE 192
W +RT H VY+ + S + CS S D ++R+WD R G +
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERS-IVCSGSLDTSIRVWDFTRPEGQECVALLQG 461
Query: 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
L + L+ S + D +++WD+ + +L+GH A+ +++ RN++
Sbjct: 462 HTSLTSGMQLRGNILV-SCNADSHVRVWDIHEGTC-VHMLSGHRSAITSLQW--FGRNMV 517
Query: 253 ASCSYDMTVCLWD 265
A+ S D TV LWD
Sbjct: 518 ATSSDDGTVKLWD 530
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 62/240 (25%), Positives = 101/240 (42%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
HD +L+ D ++K++ + +L HT V ++ + R ++ S D TV
Sbjct: 265 HDDVLVTGSDDNTLKVWCI---DKGEVMYTLVGHTGGVWTSQISQCGR-YIVSGSTDRTV 320
Query: 132 KLW-TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
K+W TVD + + T + H V + + S D TLR+WDV +
Sbjct: 321 KVWSTVDG-SLLHTLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATLHG 376
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + C ++D + S D ++KIW+ R I L GH V + F R +
Sbjct: 377 HHAAV-RCV--QFDGTTVVSGGYDFTVKIWNAHTGRC-IRTLTGHNNRVYSLLFESER-S 431
Query: 251 LLASCSYDMTVCLWDFMVEDA--LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
++ S S D ++ +WDF + V HT G+ + +L S D V VW
Sbjct: 432 IVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR---GNILVSCNADSHVRVW 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 49/174 (28%), Positives = 81/174 (46%)
Query: 96 ANPIRS---LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152
ANPI L H E H D +T S D+T+K+W +D+ + T H V
Sbjct: 242 ANPIMGSAVLRGH--EDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV 299
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASA 211
+ + + + S S D T+++W + GS + + H + C ++ +
Sbjct: 300 WTSQIS-QCGRYIVSGSTDRTVKVWSTVD-GSLLHTLQGHTSTV-RC--MAMAGSILVTG 354
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D ++++WDV + R +A L+GH AVR V+F + S YD TV +W+
Sbjct: 355 SRDTTLRVWDVESGR-HLATLHGHHAAVRCVQFDG---TTVVSGGYDFTVKIWN 404
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 41/181 (22%), Positives = 76/181 (41%)
Query: 52 TELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI---YDTALP----PTANPIRSLHE 104
T L +D G + LA H + + DG+ + YD + T IR+L
Sbjct: 358 TTLRVWDVESGRH-LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTG 416
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRH 161
H V+S + + R + S D ++++W RP V + H
Sbjct: 417 HNNRVYSLLFE-SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--- 472
Query: 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD 221
++ S + D +R+WD+ E ++ H I + W + ++A++S D ++K+WD
Sbjct: 473 GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWD 530
Query: 222 V 222
+
Sbjct: 531 I 531
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 189 (71.6 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 49/193 (25%), Positives = 91/193 (47%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKL 133
S+L+ D +++++D + + +LH H V ++ T + ++ +D TVK+
Sbjct: 349 SILVTGSRDTTLRVWDVE---SGRHLATLHGHHAAVRCVQFDGT---TVVSGGYDFTVKI 402
Query: 134 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWD-VREMGSTMIIPAHE 192
W +RT H VY+ + S + CS S D ++R+WD R G +
Sbjct: 403 WNAHTGRCIRTLTGHNNRVYSLLFESERS-IVCSGSLDTSIRVWDFTRPEGQECVALLQG 461
Query: 193 FEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLL 252
L + L+ S + D +++WD+ + +L+GH A+ +++ RN++
Sbjct: 462 HTSLTSGMQLRGNILV-SCNADSHVRVWDIHEGTC-VHMLSGHRSAITSLQW--FGRNMV 517
Query: 253 ASCSYDMTVCLWD 265
A+ S D TV LWD
Sbjct: 518 ATSSDDGTVKLWD 530
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 62/240 (25%), Positives = 101/240 (42%)
Query: 72 HDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTV 131
HD +L+ D ++K++ + +L HT V ++ + R ++ S D TV
Sbjct: 265 HDDVLVTGSDDNTLKVWCI---DKGEVMYTLVGHTGGVWTSQISQCGR-YIVSGSTDRTV 320
Query: 132 KLW-TVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPA 190
K+W TVD + + T + H V + + S D TLR+WDV +
Sbjct: 321 KVWSTVDG-SLLHTLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATLHG 376
Query: 191 HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRN 250
H + C ++D + S D ++KIW+ R I L GH V + F R +
Sbjct: 377 HHAAV-RCV--QFDGTTVVSGGYDFTVKIWNAHTGRC-IRTLTGHNNRVYSLLFESER-S 431
Query: 251 LLASCSYDMTVCLWDFMVEDA--LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 308
++ S S D ++ +WDF + V HT G+ + +L S D V VW
Sbjct: 432 IVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR---GNILVSCNADSHVRVW 488
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 49/174 (28%), Positives = 81/174 (46%)
Query: 96 ANPIRS---LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCV 152
ANPI L H E H D +T S D+T+K+W +D+ + T H V
Sbjct: 242 ANPIMGSAVLRGH--EDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGV 299
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASA 211
+ + + + S S D T+++W + GS + + H + C ++ +
Sbjct: 300 WTSQIS-QCGRYIVSGSTDRTVKVWSTVD-GSLLHTLQGHTSTV-RC--MAMAGSILVTG 354
Query: 212 SVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 265
S D ++++WDV + R +A L+GH AVR V+F + S YD TV +W+
Sbjct: 355 SRDTTLRVWDVESGR-HLATLHGHHAAVRCVQFDG---TTVVSGGYDFTVKIWN 404
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 41/181 (22%), Positives = 76/181 (41%)
Query: 52 TELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKI---YDTALP----PTANPIRSLHE 104
T L +D G + LA H + + DG+ + YD + T IR+L
Sbjct: 358 TTLRVWDVESGRH-LATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTG 416
Query: 105 HTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTS---VRTFKEHAYCVYNATWNPRH 161
H V+S + + R + S D ++++W RP V + H
Sbjct: 417 HNNRVYSLLFE-SERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--- 472
Query: 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD 221
++ S + D +R+WD+ E ++ H I + W + ++A++S D ++K+WD
Sbjct: 473 GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWD 530
Query: 222 V 222
+
Sbjct: 531 I 531
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 183 (69.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 62/216 (28%), Positives = 105/216 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV----DRPTSV--RTFKEHAYCVYN 154
+L H V S P D ++ S D T+ W + D + ++FK H++ V +
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
T + + SAS D TLR+WD+ +T H+ ++L+ K + I SAS D
Sbjct: 72 VTISADGAYAL-SASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAK-NLRQIVSASRD 129
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH-RRNLLASCSYDMTVCLWDFMVEDALV 273
K++K+W+ + A L GH V V+ SP + + + S S+D TV WD + + ++
Sbjct: 130 KTVKVWNTIGECM--ATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWD-LADYSVN 186
Query: 274 GRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
+ HT + + +S +G L AS G D ++ +W
Sbjct: 187 ADFIGHTGYISCITLSP--DGSLCASAGKDGVIILW 220
Score = 152 (58.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/208 (25%), Positives = 94/208 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSV---KIYDTALPPTANPIRSLHEHTREVHSADYNPTRR 119
V LA + +H LL++ D ++ K+ P +S H+ V +
Sbjct: 20 VTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTISADGA 79
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+ +++SWD T++LW ++ + + F H V + + + SAS D T+++W+
Sbjct: 80 YA-LSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIV-SASRDKTVKVWNT 137
Query: 180 REMGSTMI-IPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGY 237
+G M + H + A + D + SAS DK++K WD+ +Y V + GY
Sbjct: 138 --IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGY 195
Query: 238 AVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+ + SP +L AS D + LWD
Sbjct: 196 -ISCITLSPDG-SLCASAGKDGVIILWD 221
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 77 IAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW-T 135
++A D +++++D T + H +V S R +++S D TVK+W T
Sbjct: 82 LSASWDRTLRLWDLE---TGETTQRFVGHKGDVLSVSIAKNLRQ-IVSASRDKTVKVWNT 137
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPR-HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFE 194
+ + T H V +P S SAS D T++ WD+ + H
Sbjct: 138 IGE--CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGY 195
Query: 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254
I +C D L ASA D I +WD+ N + L V + FSP+R L A+
Sbjct: 196 I-SCITLSPDGSLCASAGKDGVIILWDL-NKNKTLYTLEAKA-EVHALAFSPNRYWLAAA 252
Query: 255 CSYDMTV------CLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW-DELVYV 307
+ + + L D + + VG E A+ + S + L A G+ D ++ V
Sbjct: 253 TTSGIKIFKLQERSLLDELKPEFAVGATAKDPE-AISLAWSADGQNLFA--GYTDNVIRV 309
Query: 308 WQQGMDPRA 316
WQ M P A
Sbjct: 310 WQV-MTPSA 317
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 183 (69.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 62/216 (28%), Positives = 105/216 (48%)
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTV----DRPTSV--RTFKEHAYCVYN 154
+L H V S P D ++ S D T+ W + D + ++FK H++ V +
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 155 ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVD 214
T + + SAS D TLR+WD+ +T H+ ++L+ K + I SAS D
Sbjct: 72 VTISADGAYAL-SASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAK-NLRQIVSASRD 129
Query: 215 KSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPH-RRNLLASCSYDMTVCLWDFMVEDALV 273
K++K+W+ + A L GH V V+ SP + + + S S+D TV WD + + ++
Sbjct: 130 KTVKVWNTIGECM--ATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWD-LADYSVN 186
Query: 274 GRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 308
+ HT + + +S +G L AS G D ++ +W
Sbjct: 187 ADFIGHTGYISCITLSP--DGSLCASAGKDGVIILW 220
Score = 152 (58.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/208 (25%), Positives = 94/208 (45%)
Query: 63 VYDLAWSESHDSLLIAAVADGSV---KIYDTALPPTANPIRSLHEHTREVHSADYNPTRR 119
V LA + +H LL++ D ++ K+ P +S H+ V +
Sbjct: 20 VTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTISADGA 79
Query: 120 DSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV 179
+ +++SWD T++LW ++ + + F H V + + + SAS D T+++W+
Sbjct: 80 YA-LSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIV-SASRDKTVKVWNT 137
Query: 180 REMGSTMI-IPAHEFEILACDWNKYDDC-LIASASVDKSIKIWDVRNYRVPIAVLNGHGY 237
+G M + H + A + D + SAS DK++K WD+ +Y V + GY
Sbjct: 138 --IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGY 195
Query: 238 AVRKVKFSPHRRNLLASCSYDMTVCLWD 265
+ + SP +L AS D + LWD
Sbjct: 196 -ISCITLSPDG-SLCASAGKDGVIILWD 221
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 77 IAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLW-T 135
++A D +++++D T + H +V S R +++S D TVK+W T
Sbjct: 82 LSASWDRTLRLWDLE---TGETTQRFVGHKGDVLSVSIAKNLRQ-IVSASRDKTVKVWNT 137
Query: 136 VDRPTSVRTFKEHAYCVYNATWNPR-HSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFE 194
+ + T H V +P S SAS D T++ WD+ + H
Sbjct: 138 IGE--CMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGY 195
Query: 195 ILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLAS 254
I +C D L ASA D I +WD+ N + L V + FSP+R L A+
Sbjct: 196 I-SCITLSPDGSLCASAGKDGVIILWDL-NKNKTLYTLEAKA-EVHALAFSPNRYWLAAA 252
Query: 255 CSYDMTV------CLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW-DELVYV 307
+ + + L D + + VG E A+ + S + L A G+ D ++ V
Sbjct: 253 TTSGIKIFKLQERSLLDELKPEFAVGATAKDPE-AISLAWSADGQNLFA--GYTDNVIRV 309
Query: 308 WQQGMDPRA 316
WQ M P A
Sbjct: 310 WQV-MTPSA 317
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 188 (71.2 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 206 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 259
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 260 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 313
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 369
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 370 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 425
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 426 SG--AYDGKIK-VWDLQAALDPRA 446
Score = 187 (70.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 270 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 323
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 324 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 379
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 380 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 432
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 433 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 488
Score = 124 (48.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 341 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 393
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 394 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 450
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 451 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 496
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 188 (71.2 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 206 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 259
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 260 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 313
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 369
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 370 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 425
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 426 SG--AYDGKIK-VWDLQAALDPRA 446
Score = 187 (70.9 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 270 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 323
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 324 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 379
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 380 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 432
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 433 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 488
Score = 124 (48.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 341 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 393
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 394 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 450
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 451 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 496
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 188 (71.2 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 225 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 278
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 279 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 332
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 333 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 388
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 389 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 444
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 445 SG--AYDGKIK-VWDLQAALDPRA 465
Score = 187 (70.9 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 289 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 342
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 343 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 398
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 399 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 451
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 452 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 507
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 360 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 412
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 413 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 469
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 470 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 515
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 188 (71.2 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 226 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 279
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 280 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 333
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 334 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 389
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 390 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 445
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 446 SG--AYDGKIK-VWDLQAALDPRA 466
Score = 187 (70.9 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 290 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 343
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 344 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 399
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 400 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 452
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 453 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 508
Score = 124 (48.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 361 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 413
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 414 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 470
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 471 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 516
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 238 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 291
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 292 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 345
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 401
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 402 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 457
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 458 SG--AYDGKIK-VWDLQAALDPRA 478
Score = 187 (70.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 302 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 355
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 356 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 411
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 412 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 464
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 465 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 520
Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 373 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 425
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 482
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 483 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 528
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 58 DTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPT 117
+ + GVY L + D +I+ + D S+KI+D + ++ L HT V Y+
Sbjct: 238 ENSKGVYCLQYD---DEKIISGLRDNSIKIWDKT---SLECLKVLTGHTGSVLCLQYDER 291
Query: 118 RRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIW 177
+T S D TV++W V+ + T H V + ++ + + + S D ++ +W
Sbjct: 292 ---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSIAVW 345
Query: 178 DVREMGS-TM--IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNG 234
D+ T+ ++ H + D +DD I SAS D++IK+W + LNG
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEF-VRTLNG 401
Query: 235 HGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFA--VGVDMSVLV 292
H + +++ R L+ S S D T+ LWD A + + H E + D +V
Sbjct: 402 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDNKRIV 457
Query: 293 EGLLASTGWDELVYVWQQGMDPRA 316
G A G + V+ Q +DPRA
Sbjct: 458 SG--AYDGKIK-VWDLQAALDPRA 478
Score = 187 (70.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 66/239 (27%), Positives = 114/239 (47%)
Query: 39 VHVLDLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTALPPTANP 98
V V D++ L L+ + A V L +S + L++ D S+ ++D A
Sbjct: 302 VRVWDVN-TGEVLNTLIHHNEA--VLHLRFS---NGLMVTCSKDRSIAVWDMASATDITL 355
Query: 99 IRSLHEHTREVHSADYNPTRRDSFITS-SWDDTVKLWTVDRPTSVRTFKEHAYCVYNATW 157
R L H V+ D++ D +I S S D T+K+W+ VRT H + +
Sbjct: 356 RRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY 411
Query: 158 NPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKS 216
R + S S D T+R+WD+ E G+ + ++ HE E++ C ++D+ I S + D
Sbjct: 412 RDR---LVVSGSSDNTIRLWDI-ECGACLRVLEGHE-ELVRCI--RFDNKRIVSGAYDGK 464
Query: 217 IKIWDVR---NYRVP-----IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
IK+WD++ + R P + L H V +++F + + S S+D T+ +WDF+
Sbjct: 465 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ---IISSSHDDTILIWDFL 520
Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 73 DSLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITS-SWDDTV 131
D +++A D ++K++ T+ T +R+L+ H R + Y RD + S S D+T+
Sbjct: 373 DKYIVSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTI 425
Query: 132 KLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDV------REMGST 185
+LW ++ +R + H V ++ + S + D +++WD+ R ST
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAPAST 482
Query: 186 MIIPA---HEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLN 233
+ + H + ++D+ I S+S D +I IWD N VP + N
Sbjct: 483 LCLRTLVEHSGRVFRL---QFDEFQIISSSHDDTILIWDFLN--VPPSAQN 528
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 183 (69.5 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 59/214 (27%), Positives = 94/214 (43%)
Query: 102 LHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPRH 161
L H + +N +++ D TV++W ++ + +R FK H V + N R
Sbjct: 75 LKGHKGAIMEVKFNADS-SHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRG 133
Query: 162 SDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWD 221
+ CSAS D T+ + D+R + +++ A +N D +I +D IK+WD
Sbjct: 134 PQMICSASDDGTVMVHDMRSKEAAKKFIC-KYQQTAVTFNDAADNVICGG-IDNQIKVWD 191
Query: 222 VRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD---FMVEDALVGRYD- 277
+ V VL+GH + + S H N L S S D ++ WD F+ LV RY
Sbjct: 192 MLRNDVRY-VLSGHRDTITSLSVS-HNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQG 249
Query: 278 --HHTEF-AVGVDMSVLVEGLLASTGWDELVYVW 308
H+ E + S + A + D VYVW
Sbjct: 250 ASHNFEKNLLKCGWSPRDNYITAGSA-DRFVYVW 282
Score = 142 (55.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 64/254 (25%), Positives = 116/254 (45%)
Query: 74 SLLIAAVADGSVKIYDTALPPTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDD-TVK 132
S L++A D +V+++D T + IR+ HT V+S D N R I S+ DD TV
Sbjct: 92 SHLVSAGTDKTVRVWDME---TGSCIRNFKSHTDIVNSVDVN-RRGPQMICSASDDGTVM 147
Query: 133 LWTVDRPTSVRTFKEHAYCVYN---ATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP 189
+ + + + F C Y T+N +V C D +++WD+ ++
Sbjct: 148 VHDMRSKEAAKKF----ICKYQQTAVTFNDAADNVICGGI-DNQIKVWDMLRNDVRYVLS 202
Query: 190 AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP----IAVLNG--HGYAVRKVK 243
H I + + + L+++ S+D S+ WD+R + VP +A G H + +K
Sbjct: 203 GHRDTITSLSVSHNGNFLLSN-SMDCSLMSWDIRPF-VPAQRLVARYQGASHNFEKNLLK 260
Query: 244 --FSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL--VEGLLAST 299
+SP R N + + S D V +W+ A V + H V+ + L + +L S
Sbjct: 261 CGWSP-RDNYITAGSADRFVYVWNAKSR-ACVYKLPGHLG---SVNCTALHPTQQILLSA 315
Query: 300 GWDELVYVWQQGMD 313
G D+ +++ + ++
Sbjct: 316 GSDKTIFLGELDLE 329
Score = 141 (54.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 182 MGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRK 241
M TM++ H EI ++ D +ASA D+ I +W+V AVL GH A+ +
Sbjct: 26 MAPTMVLQGHGGEIYTSQFSS-DGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIME 84
Query: 242 VKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGW 301
VKF+ +L+ S D TV +WD M + + + HT+ VD++ ++ S
Sbjct: 85 VKFNADSSHLV-SAGTDKTVRVWD-METGSCIRNFKSHTDIVNSVDVNRRGPQMICSASD 142
Query: 302 DELVYV 307
D V V
Sbjct: 143 DGTVMV 148
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 186 (70.5 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 57/222 (25%), Positives = 106/222 (47%)
Query: 99 IRSLHEH---TREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNA 155
+R +++H T ++ + D+N +++ + V L+ + + S T E Y NA
Sbjct: 208 VRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYES-ETLNESQYWENNA 266
Query: 156 T------WNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP--AHEFEILACDWNKYDDCL 207
W P H +FC+A + L+++D R + + + +AC+ Y L
Sbjct: 267 IGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGNSVNSVACNPG-YATGL 325
Query: 208 IASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM 267
A+ + IK+WD+RN+ ++ L+GH +V ++K++P N+L S S D +V L D M
Sbjct: 326 -ATGDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHD-M 383
Query: 268 VEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 309
D+ + + H D S ++AS D ++VW+
Sbjct: 384 SNDSTIFTHLGHMLGVNDFDWSYADPWMVASVADDNSLHVWK 425
Score = 181 (68.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 49/188 (26%), Positives = 85/188 (45%)
Query: 36 NGRVHVLDLSP-AAPALTELVAFDT-ADGVYDLAWSESHDSLLIAAVADGSVKIYDTALP 93
NG V++ DL + L E ++ A GV D+ W +HDSL A +G +K+YDT
Sbjct: 240 NGLVNLYDLKKYESETLNESQYWENNAIGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQ 299
Query: 94 PTANPIRSLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDR-PTSVRTFKEHAYCV 152
A ++ V+S NP T + +K+W + S+ H+ V
Sbjct: 300 SAAVQNANIGN---SVNSVACNPGYATGLATGDSNGVIKMWDIRNFDNSLSELHGHSDSV 356
Query: 153 YNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASAS 212
WNP+ ++ S+S D ++++ D+ + H + DW+ D ++AS +
Sbjct: 357 TQLKWNPKCHNILGSSSSDHSVKLHDMSNDSTIFTHLGHMLGVNDFDWSYADPWMVASVA 416
Query: 213 VDKSIKIW 220
D S+ +W
Sbjct: 417 DDNSLHVW 424
Score = 149 (57.5 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 48/225 (21%), Positives = 96/225 (42%)
Query: 43 DLSPAAPALTELVAFDTADGVYDLAWSESHDSLLIAAVADGSVKIYDTAL--PPTANPIR 100
DLS L T D ++ + W+ + + LL++A +G V +YD T N +
Sbjct: 202 DLSKVQVRLVNKHIPSTTD-IFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQ 260
Query: 101 SLHEHTREVHSADYNPTRRDSFITSSWDDTVKLWTVDRPTSVRTFKEHAYCVYNATWNPR 160
+ V+ ++ PT F T+ + +KL+ ++ V + NP
Sbjct: 261 YWENNAIGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGNSVNSVACNPG 320
Query: 161 HSDVFCSASGDCTLRIWDVREMGSTMI-IPAHEFEILACDWNKYDDCLIASASVDKSIKI 219
++ + + +++WD+R +++ + H + WN ++ S+S D S+K+
Sbjct: 321 YATGLATGDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKL 380
Query: 220 WDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 264
D+ N L GH V +S ++AS + D ++ +W
Sbjct: 381 HDMSNDSTIFTHL-GHMLGVNDFDWSYADPWMVASVADDNSLHVW 424
WARNING: HSPs involving 1089 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 317 317 0.00083 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1339
No. of states in DFA: 630 (67 KB)
Total size of DFA: 270 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.46u 0.19s 24.65t Elapsed: 00:00:01
Total cpu time: 24.55u 0.20s 24.75t Elapsed: 00:00:01
Start: Sat May 11 02:20:33 2013 End: Sat May 11 02:20:34 2013
WARNINGS ISSUED: 2